BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB1444 (rpl10e) DE:ribosomal protein L10
(181 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||D75052 ribosomal protein l10 PAB1444 - Pyrococcus abyssi (s... 371 e-102
sp|O58367|RL10_PYRHO 50S RIBOSOMAL PROTEIN L10E >gi|7447296|pir|... 364 e-100
pir||T44572 ribosomal protein L10 [similarity] - Pyrococcus furi... 361 2e-99
sp|Q57963|RL10_METJA 50S RIBOSOMAL PROTEIN L10E >gi|2129354|pir|... 175 4e-43
sp|O27191|RL10_METTH 50S RIBOSOMAL PROTEIN L10E >gi|7447297|pir|... 168 3e-41
gi|11498937 ubiquinol-cytochrome C reductase complex, subunit VI... 160 9e-39
sp|Q9YEY5|RL10_AERPE 50S RIBOSOMAL PROTEIN L10E >gi|7447299|pir|... 135 3e-31
gb|AAK40634.1| LSU ribosomal protein L10E (rpl10E) [Sulfolobus s... 134 6e-31
emb|CAC12185.1| (AL445066) probable 50S ribosomal protein L10 [T... 133 1e-30
gb|AAG18728.1| (AE004977) 50S ribosomal protein L10E; Rpl10e [Ha... 125 2e-28
sp|Q39724|RL10_EUGGR 60S RIBOSOMAL PROTEIN L10 >gi|1129139|emb|C... 122 3e-27
emb|CAB39087.1| (AL034358) 60S ribosomal protein L10 [Leishmania... 118 3e-26
emb|CAB95736.1| (AJ278542) putative ribosomal protein L10 [Leish... 118 3e-26
sp|P45635|R101_ORYSA 60S RIBOSOMAL PROTEIN L10-1 (PUTATIVE TUMOR... 118 4e-26
sp|Q09533|RL10_CAEEL 60S RIBOSOMAL PROTEIN L10 (QM PROTEIN HOMOL... 118 4e-26
emb|CAB88272.1| (AL353014) 60s ribosomal protein l10 [Schizosacc... 118 5e-26
pir||JC4755 ribosomal protein L10.e, cytosolic - fission yeast ... 117 7e-26
sp|O22431|RL10_PINTA 60S RIBOSOMAL PROTEIN L10 (WILM'S TUMOR SUP... 117 7e-26
gb|AAC98301.1| (AF099012) QM protein [Bombyx mandarina] 117 7e-26
sp|Q09127|RL10_SCHPO 60S RIBOSOMAL PROTEIN L10 (QM PROTEIN HOMOL... 117 7e-26
gi|5174431 ribosomal protein L10; QM gene; DNA segment on chromo... 116 1e-25
sp|P45634|RL10_MOUSE 60S RIBOSOMAL PROTEIN L10 (QM PROTEIN HOMOL... 116 1e-25
sp|O61231|RL10_DROME 60S RIBOSOMAL PROTEIN L10 (QM PROTEIN HOMOL... 116 2e-25
sp|Q40649|R103_ORYSA 60S RIBOSOMAL PROTEIN L10-3 (QM/R22) >gi|12... 115 3e-25
gb|AAD33912.1|AF143815_1 (AF143815) ribosomal protein [Bos taurus] 115 3e-25
gb|AAF43932.1|AC012188_9 (AC012188) Strong similarity, practical... 115 4e-25
gb|AAD14497.1| (AC005508) 29621 [Arabidopsis thaliana] 115 5e-25
gb|AAD56018.1|AF180758_1 (AF180758) 60S ribosomal protein L10 [V... 115 5e-25
sp|P93847|RL10_SOLME 60S RIBOSOMAL PROTEIN L10 (EQM) >gi|1902894... 114 6e-25
gb|AAG17477.1|AF106846_1 (AF106846) QM protein [Oryza sativa] 114 8e-25
gb|AAG27431.1| (AF295636) QM-like protein [Elaeis guineensis] 114 8e-25
sp|Q08200|RL10_CHICK 60S RIBOSOMAL PROTEIN L10 (JUN-BINDING PROT... 114 8e-25
gi|6323104 Ribosomal protein L10; Ubiquinol-cytochrome C reducta... 114 8e-25
sp|P45633|RL10_MAIZE 60S RIBOSOMAL PROTEIN L10 (QM PROTEIN HOMOL... 112 2e-24
gb|AAF34765.1|AF227620_1 (AF227620) 60S ribosomal protein L10 [E... 112 2e-24
sp|Q08770|RL10_ARATH 60S RIBOSOMAL PROTEIN L10 (WILM'S TUMOR SUP... 112 3e-24
sp|P45636|R102_ORYSA 60S RIBOSOMAL PROTEIN L10-2 (PUTATIVE TUMOR... 109 3e-23
pdb|1FFK|F Chain F, Crystal Structure Of The Large Ribosomal Sub... 104 9e-22
gb|AAA99158.1| (U55212) Wilms' tumor-related protein QM [Oryza s... 92 4e-18
gb|AAC36512.1| (U89405) QM protein [Mus musculus] 91 7e-18
pir||JN0273 ribosomal protein L10, cytosolic - human (fragment) ... 90 2e-17
gb|AAG27854.1|AC079285_7 (AC079285) 60S ribosomal protein L10, p... 89 3e-17
dbj|BAA19414.1| (AB001582) QM family protein [Solanum melongena] 76 3e-13
sp|Q40592|RL10_TOBAC 60S RIBOSOMAL PROTEIN L10 (QM PROTEIN HOMOL... 70 1e-11
pir||S19224 ribosomal protein L10.e, cytosolic - rice (fragment)... 69 2e-11
>pir||D75052 ribosomal protein l10 PAB1444 - Pyrococcus abyssi (strain Orsay)
>gi|5458826|emb|CAB50313.1| (AJ248287) ribosomal protein
L10 [Pyrococcus abyssi]
Length = 181
Score = 371 bits (943), Expect = e-102
Identities = 181/181 (100%), Positives = 181/181 (100%)
Query: 1 MALRPAKIDRYVDKPAYTRREYIRGAPGPKITIFDMGNPAGDFEFEVALHVSQPVQIRQN 60
MALRPAKIDRYVDKPAYTRREYIRGAPGPKITIFDMGNPAGDFEFEVALHVSQPVQIRQN
Sbjct: 1 MALRPAKIDRYVDKPAYTRREYIRGAPGPKITIFDMGNPAGDFEFEVALHVSQPVQIRQN 60
Query: 61 ALEAARQQVNRYLQKNVGRSNYHFKIRVYPFQVLRENPMATGRKADRYGNGMRRPFGKPI 120
ALEAARQQVNRYLQKNVGRSNYHFKIRVYPFQVLRENPMATGRKADRYGNGMRRPFGKPI
Sbjct: 61 ALEAARQQVNRYLQKNVGRSNYHFKIRVYPFQVLRENPMATGRKADRYGNGMRRPFGKPI 120
Query: 121 GLAARLKKDQKVLSIRVNRQHLKFAIEGARRAAMKFPVKCYYRIYDKEGNDVTTKILSQG 180
GLAARLKKDQKVLSIRVNRQHLKFAIEGARRAAMKFPVKCYYRIYDKEGNDVTTKILSQG
Sbjct: 121 GLAARLKKDQKVLSIRVNRQHLKFAIEGARRAAMKFPVKCYYRIYDKEGNDVTTKILSQG 180
Query: 181 L 181
L
Sbjct: 181 L 181
>sp|O58367|RL10_PYRHO 50S RIBOSOMAL PROTEIN L10E >gi|7447296|pir||A71108 ribosomal
protein L10 [similarity] - Pyrococcus horikoshii
>gi|3257040|dbj|BAA29723.1| (AP000003) 181aa long
hypothetical ubiquinol-cytochrome c reductase complex
subunit VI [Pyrococcus horikoshii]
Length = 181
Score = 364 bits (924), Expect = e-100
Identities = 175/181 (96%), Positives = 179/181 (98%)
Query: 1 MALRPAKIDRYVDKPAYTRREYIRGAPGPKITIFDMGNPAGDFEFEVALHVSQPVQIRQN 60
MALRPAKIDRYVDKPAYTRREYIRGAPGPKITIFDMGNPAGDFEFEVALH ++PVQIRQN
Sbjct: 1 MALRPAKIDRYVDKPAYTRREYIRGAPGPKITIFDMGNPAGDFEFEVALHTAEPVQIRQN 60
Query: 61 ALEAARQQVNRYLQKNVGRSNYHFKIRVYPFQVLRENPMATGRKADRYGNGMRRPFGKPI 120
ALEAARQQVNRYLQKNVGRSNYHFKIRVYPFQVLRENPMATGRKADRYGNGMRRPFGKPI
Sbjct: 61 ALEAARQQVNRYLQKNVGRSNYHFKIRVYPFQVLRENPMATGRKADRYGNGMRRPFGKPI 120
Query: 121 GLAARLKKDQKVLSIRVNRQHLKFAIEGARRAAMKFPVKCYYRIYDKEGNDVTTKILSQG 180
GLAARLK+DQK+LSIRVNRQHLKFAIEGARRAAMKFP KCYYRIYDKEGNDVTTKILSQG
Sbjct: 121 GLAARLKRDQKILSIRVNRQHLKFAIEGARRAAMKFPCKCYYRIYDKEGNDVTTKILSQG 180
Query: 181 L 181
L
Sbjct: 181 L 181
>pir||T44572 ribosomal protein L10 [similarity] - Pyrococcus furiosus
>gi|6066245|gb|AAF03230.1|AF156097_10 (AF156097) QM
homolog [Pyrococcus furiosus]
Length = 181
Score = 361 bits (918), Expect = 2e-99
Identities = 174/181 (96%), Positives = 178/181 (98%)
Query: 1 MALRPAKIDRYVDKPAYTRREYIRGAPGPKITIFDMGNPAGDFEFEVALHVSQPVQIRQN 60
MALRPAKIDRYVDKPAYTRREYIRGAPGPKITIFDMGNPAGDFEFEV+LH ++PVQIRQN
Sbjct: 1 MALRPAKIDRYVDKPAYTRREYIRGAPGPKITIFDMGNPAGDFEFEVSLHTAEPVQIRQN 60
Query: 61 ALEAARQQVNRYLQKNVGRSNYHFKIRVYPFQVLRENPMATGRKADRYGNGMRRPFGKPI 120
ALEAARQQVNRYLQKNVGRSNYHFKIRVYPFQVLRENPMATGRKADRYGNGMRRPFGKPI
Sbjct: 61 ALEAARQQVNRYLQKNVGRSNYHFKIRVYPFQVLRENPMATGRKADRYGNGMRRPFGKPI 120
Query: 121 GLAARLKKDQKVLSIRVNRQHLKFAIEGARRAAMKFPVKCYYRIYDKEGNDVTTKILSQG 180
GLAARLKKDQK+LSIRVNRQHLKFAIEGARRAAMKFP KCYYRIYDKEGNDVTTKILSQ
Sbjct: 121 GLAARLKKDQKILSIRVNRQHLKFAIEGARRAAMKFPCKCYYRIYDKEGNDVTTKILSQS 180
Query: 181 L 181
L
Sbjct: 181 L 181
>sp|Q57963|RL10_METJA 50S RIBOSOMAL PROTEIN L10E >gi|2129354|pir||G64367 ribosomal
protein L10 [similarity] - Methanococcus jannaschii
>gi|1591247|gb|AAB98535.1| (U67503) ubiquinol-cytochrome
C reductase complex, subunitVI requiring protein
[Methanococcus jannaschii]
Length = 174
Score = 175 bits (438), Expect = 4e-43
Identities = 90/171 (52%), Positives = 116/171 (67%), Gaps = 2/171 (1%)
Query: 2 ALRPAKIDRYVDKPAYTRREYIRGAPGPKITIFDMGNPAGDFEFEVALHVSQPVQIRQNA 61
+LRP + R VDKP YTR+EY++G P PK+ F MGN + +F +V L ++P+QIR NA
Sbjct: 3 SLRPNRCYRDVDKPPYTRKEYVKGVPQPKVVHFIMGNLSAEFPVKVNLVATRPIQIRHNA 62
Query: 62 LEAARQQVNRYLQKNVGRSNYHFKIRVYPFQVLRENPMATGRKADRYGNGMRRPFGKPIG 121
LEAAR N+YL K GR Y F+IRVYP Q+LRE+ MATG ADR +GMR FGKPIG
Sbjct: 63 LEAARVAANKYLTKMCGRMGYKFQIRVYPHQILREHKMATGAGADRISDGMRLAFGKPIG 122
Query: 122 LAARLKKDQKVLSIRVNRQHLKFAIEGARRAAMKFPVKCYYRIYDKEGNDV 172
AAR+K+ Q +L++ VN A E RRAAMK PV C RI ++G ++
Sbjct: 123 TAARVKEGQAILTVWVNPDKFPAAKEALRRAAMKLPVPC--RIVIEQGKEL 171
>sp|O27191|RL10_METTH 50S RIBOSOMAL PROTEIN L10E >gi|7447297|pir||H69015 ribosomal
protein L10 - Methanobacterium thermoautotrophicum
(strain Delta H) >gi|2622222|gb|AAB85608.1| (AE000882)
ribosomal protein L10 [Methanobacterium
thermoautotrophicum]
Length = 160
Score = 168 bits (422), Expect = 3e-41
Identities = 80/145 (55%), Positives = 102/145 (70%)
Query: 16 AYTRREYIRGAPGPKITIFDMGNPAGDFEFEVALHVSQPVQIRQNALEAARQQVNRYLQK 75
AYTRREYI+ PG KI +DMGN + +F +++ V P QI NALEAAR NRY+Q+
Sbjct: 4 AYTRREYIKKIPGSKIVQYDMGNLSAEFPISLSVAVKAPTQITHNALEAARIASNRYMQR 63
Query: 76 NVGRSNYHFKIRVYPFQVLRENPMATGRKADRYGNGMRRPFGKPIGLAARLKKDQKVLSI 135
GR YH KIRVYP ++RENPMATG ADR +GMR+ FGKP+ A +KK+QK+++I
Sbjct: 64 RAGRMGYHLKIRVYPHHIVRENPMATGAGADRVQDGMRKAFGKPVSTVALVKKNQKIITI 123
Query: 136 RVNRQHLKFAIEGARRAAMKFPVKC 160
N+++ K A E RRAAMKFPV C
Sbjct: 124 ETNKKNFKDAKEALRRAAMKFPVPC 148
>gi|11498937 ubiquinol-cytochrome C reductase complex, subunit VI requiring
protein [Archaeoglobus fulgidus]
>gi|6093991|sp|O28930|RL10_ARCFU 50S RIBOSOMAL PROTEIN
L10E >gi|7447298|pir||B69417 ribosomal protein L10
[similarity] - Archaeoglobus fulgidus
>gi|2649235|gb|AAB89905.1| (AE001011)
ubiquinol-cytochrome C reductase complex, subunit VI
requiring protein [Archaeoglobus fulgidus]
Length = 174
Score = 160 bits (401), Expect = 9e-39
Identities = 78/157 (49%), Positives = 106/157 (66%), Gaps = 1/157 (0%)
Query: 1 MALRPAKIDRYVDKPAYTRREYIRGAPGPKITIFDMGNPAGDFEFEVALHVSQPVQIRQN 60
MA +PA++ R +++P YTR EYI GAPG ++ +FDMGN + DF + L + VQIR+N
Sbjct: 1 MARKPARMWRRLERP-YTRTEYIDGAPGTRVRMFDMGNKSADFPVMLTLVAKEAVQIREN 59
Query: 61 ALEAARQQVNRYLQKNVGRSNYHFKIRVYPFQVLRENPMATGRKADRYGNGMRRPFGKPI 120
ALEAAR N+Y+ + G SNY K+R++P +LRE+ MA G ADR GMR FGKP+
Sbjct: 60 ALEAARVVANKYVSRRAGASNYKLKLRIFPHHILREHKMAVGAGADRISQGMRAAFGKPV 119
Query: 121 GLAARLKKDQKVLSIRVNRQHLKFAIEGARRAAMKFP 157
G AAR+K K++S+ V +H + A E RRAAMK P
Sbjct: 120 GRAARVKPGTKIMSVWVKPEHFEIAKEALRRAAMKMP 156
>sp|Q9YEY5|RL10_AERPE 50S RIBOSOMAL PROTEIN L10E >gi|7447299|pir||G72739 probable
ribosomal protein L10 APE0449 - Aeropyrum pernix
(strain K1) >gi|5104095|dbj|BAA79411.1| (AP000059) 174aa
long hypothetical 50S ribosomal protein L10 [Aeropyrum
pernix]
Length = 174
Score = 135 bits (337), Expect = 3e-31
Identities = 75/160 (46%), Positives = 97/160 (59%), Gaps = 2/160 (1%)
Query: 1 MALRPAKIDRYVDKPAYTRREYIRGAPGPKITIFDMGNPAGDFEFEVA--LHVSQPVQIR 58
M LRPA+ + P YTRREYI G P PKIT F+MGN ++E+ L + + QIR
Sbjct: 1 MPLRPARCYTHFSGPPYTRREYIHGVPPPKITRFEMGNREMMEKWEIKGELVMLEAGQIR 60
Query: 59 QNALEAARQQVNRYLQKNVGRSNYHFKIRVYPFQVLRENPMATGRKADRYGNGMRRPFGK 118
NALEAAR VN+YL +G N++F+IRVYP V+REN M ADR +GMR+ FGK
Sbjct: 61 HNALEAARIAVNKYLATTIGDKNFYFRIRVYPHHVIRENKMMAFAGADRLQDGMRQAFGK 120
Query: 119 PIGLAARLKKDQKVLSIRVNRQHLKFAIEGARRAAMKFPV 158
P+G AAR+ VL + + + E RR A KFP+
Sbjct: 121 PVGTAARVYPGTVVLEVWARKGDEENVKEALRRGASKFPL 160
>gb|AAK40634.1| LSU ribosomal protein L10E (rpl10E) [Sulfolobus solfataricus]
Length = 178
Score = 134 bits (334), Expect = 6e-31
Identities = 74/161 (45%), Positives = 100/161 (61%), Gaps = 2/161 (1%)
Query: 1 MALRPAKIDRYVDKPAYTRREYIRGAPGPKITIFDMGNPAGDFEFEVALHVSQPVQIRQN 60
M LRP + R+ PAYTR+EYI G P PKIT F GNP GD+++EV L ++ QIR N
Sbjct: 1 MPLRPGRCYRHFSGPAYTRKEYIPGIPQPKITKFTSGNPNGDYDYEVRLITTEIGQIRHN 60
Query: 61 ALEAARQQVNRYLQKNVG-RSNYHFKIRVYPFQVLRENPMATGRKADRYGNGMRRPFGKP 119
ALEA R + L K G +++ I YP VLREN M ADR +GMR FG P
Sbjct: 61 ALEAVRTLTLKTLSKKTGSETSFFMWILKYPHHVLRENKMMAFAGADRLQDGMRLSFGTP 120
Query: 120 IGLAARLKK-DQKVLSIRVNRQHLKFAIEGARRAAMKFPVK 159
IG AAR++K + ++ I+V ++HL+FA E + A+ K P++
Sbjct: 121 IGTAARIEKLGETLIVIKVKKEHLEFAKEALKIASKKLPLR 161
>emb|CAC12185.1| (AL445066) probable 50S ribosomal protein L10 [Thermoplasma
acidophilum]
Length = 169
Score = 133 bits (331), Expect = 1e-30
Identities = 67/146 (45%), Positives = 87/146 (58%)
Query: 15 PAYTRREYIRGAPGPKITIFDMGNPAGDFEFEVALHVSQPVQIRQNALEAARQQVNRYLQ 74
PAYTR+E++ G P PKIT F GN DF E+ L +P QIR ALEAAR VNR +
Sbjct: 8 PAYTRKEFMGGVPYPKITTFVQGNQKKDFPIEMRLVAEEPCQIRHTALEAARVSVNRRMT 67
Query: 75 KNVGRSNYHFKIRVYPFQVLRENPMATGRKADRYGNGMRRPFGKPIGLAARLKKDQKVLS 134
+ G ++ K+ YP VLRE+ MATG ADR +GMR FG+P+G AAR+ D ++
Sbjct: 68 EAAGLDYFYLKVVPYPHHVLREHKMATGAGADRISSGMRAAFGRPVGTAARVYPDDVIMI 127
Query: 135 IRVNRQHLKFAIEGARRAAMKFPVKC 160
R + H K R+AA+K P C
Sbjct: 128 ARTDEAHAKELKTALRKAAIKLPTPC 153
>gb|AAG18728.1| (AE004977) 50S ribosomal protein L10E; Rpl10e [Halobacterium sp.
NRC-1]
Length = 176
Score = 125 bits (312), Expect = 2e-28
Identities = 64/163 (39%), Positives = 95/163 (58%), Gaps = 3/163 (1%)
Query: 1 MALRPAKIDRYVDKPAYTRREYIRGAPGPKITIFDMGN---PAGDFEFEVALHVSQPVQI 57
M+ +PA + R +DKP+YTRR+Y+ G PG KI MG+ A D+ +++L + Q+
Sbjct: 1 MSEKPASMYRKIDKPSYTRRDYVTGIPGSKIAQHKMGDLQADADDYPVQISLVPQEECQL 60
Query: 58 RQNALEAARQQVNRYLQKNVGRSNYHFKIRVYPFQVLRENPMATGRKADRYGNGMRRPFG 117
R +LEAAR NR+L K +G NY ++R +P Q++REN ATG ADR +GMR+ FG
Sbjct: 61 RHGSLEAARLSANRHLIKELGEGNYKMQLRKFPHQIIRENKQATGAGADRVSDGMRQAFG 120
Query: 118 KPIGLAARLKKDQKVLSIRVNRQHLKFAIEGARRAAMKFPVKC 160
P+G AAR++ ++ + + E RRA K C
Sbjct: 121 VPVGTAARIQPGDQLFTAYCEVEQAAAVKEAFRRAYNKITPPC 163
>sp|Q39724|RL10_EUGGR 60S RIBOSOMAL PROTEIN L10 >gi|1129139|emb|CAA63831.1| (X94087)
similar to a gene located in region Xq27-28 of humans
[Euglena gracilis]
Length = 215
Score = 122 bits (303), Expect = 3e-27
Identities = 70/159 (44%), Positives = 87/159 (54%), Gaps = 3/159 (1%)
Query: 1 MALRPAKIDRYVDKPAYTRREYIRGAPGPKITIFDMGNP---AGDFEFEVALHVSQPVQI 57
M RPAK RY AY + Y RG P KI I+D G A F L + QI
Sbjct: 1 MGRRPAKCYRYCKNKAYPKSRYCRGVPEAKIRIYDCGMRKLNADTFPLTYHLISMEREQI 60
Query: 58 RQNALEAARQQVNRYLQKNVGRSNYHFKIRVYPFQVLRENPMATGRKADRYGNGMRRPFG 117
ALEAAR N+Y+ KN G+ YH ++RV+PF V R N M + ADR GMR FG
Sbjct: 61 GSEALEAARINANKYMIKNAGKEAYHIRVRVHPFHVCRINKMLSCAGADRLQQGMRGAFG 120
Query: 118 KPIGLAARLKKDQKVLSIRVNRQHLKFAIEGARRAAMKF 156
KP GLAAR++ Q ++SIRV QH + +RA+ KF
Sbjct: 121 KPNGLAARVRIGQPLMSIRVKPQHEAVVVAALKRASYKF 159
>emb|CAB39087.1| (AL034358) 60S ribosomal protein L10 [Leishmania major]
>gi|6318200|emb|CAB60241.1| (AL109812) 60S ribosomal
protein L10 [Leishmania major]
Length = 213
Score = 118 bits (294), Expect = 3e-26
Identities = 67/160 (41%), Positives = 89/160 (54%), Gaps = 3/160 (1%)
Query: 1 MALRPAKIDRYVDKPAYTRREYIRGAPGPKITIFDMGNPAGDF-EFEVALHV--SQPVQI 57
MA RP++ R+ Y + + RG P PKI FD+G EF V +HV + QI
Sbjct: 1 MARRPSRCYRFCKNKPYPKSRFCRGVPDPKIRNFDIGRRRATVDEFPVCIHVVSRELEQI 60
Query: 58 RQNALEAARQQVNRYLQKNVGRSNYHFKIRVYPFQVLRENPMATGRKADRYGNGMRRPFG 117
ALEAAR Q N+Y+ K + +H + R +PF VLR N M + ADR GMR FG
Sbjct: 61 ASEALEAARIQANKYMVKRANKDVFHMRTRAHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
Query: 118 KPIGLAARLKKDQKVLSIRVNRQHLKFAIEGARRAAMKFP 157
KP G+ AR++ Q +LS+R ++ A E RRA MKFP
Sbjct: 121 KPNGVCARVRIGQILLSMRTKEAYVPQAFEALRRAKMKFP 160
>emb|CAB95736.1| (AJ278542) putative ribosomal protein L10 [Leishmania infantum]
Length = 213
Score = 118 bits (294), Expect = 3e-26
Identities = 67/160 (41%), Positives = 89/160 (54%), Gaps = 3/160 (1%)
Query: 1 MALRPAKIDRYVDKPAYTRREYIRGAPGPKITIFDMGNPAGDF-EFEVALHV--SQPVQI 57
MA RP++ R+ Y + + RG P PKI FD+G EF V +HV + QI
Sbjct: 1 MARRPSRCYRFCKNKPYPKSRFCRGVPDPKIRNFDIGRRRATVDEFPVCIHVVSRELEQI 60
Query: 58 RQNALEAARQQVNRYLQKNVGRSNYHFKIRVYPFQVLRENPMATGRKADRYGNGMRRPFG 117
ALEAAR Q N+Y+ K + +H + R +PF VLR N M + ADR GMR FG
Sbjct: 61 ASEALEAARIQANKYMVKRANKDVFHMRTRAHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
Query: 118 KPIGLAARLKKDQKVLSIRVNRQHLKFAIEGARRAAMKFP 157
KP G+ AR++ Q +LS+R ++ A E RRA MKFP
Sbjct: 121 KPNGVCARVRIGQILLSMRTKEAYVPQAFEALRRAKMKFP 160
>sp|P45635|R101_ORYSA 60S RIBOSOMAL PROTEIN L10-1 (PUTATIVE TUMOR SUPRESSOR SC34)
>gi|1076751|pir||S49575 ribosomal protein L10.e,
cytosolic - rice >gi|575355|emb|CAA57339.1| (X81691)
putative tumor suppresser [Oryza sativa]
Length = 224
Score = 118 bits (293), Expect = 4e-26
Identities = 66/160 (41%), Positives = 87/160 (54%), Gaps = 3/160 (1%)
Query: 1 MALRPAKIDRYVDKPAYTRREYIRGAPGPKITIFDMG-NPAGDFEFEVALHVS--QPVQI 57
M RPA+ R + Y + Y RG P PKI I+D+G G EF +H+ + +
Sbjct: 1 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPYCVHLVSWEKENV 60
Query: 58 RQNALEAARQQVNRYLQKNVGRSNYHFKIRVYPFQVLRENPMATGRKADRYGNGMRRPFG 117
ALEAAR N+Y+ KN G+ +H ++RV+P VLR N M + ADR GMR FG
Sbjct: 61 SSEALEAARIACNKYMTKNAGKDAFHLRVRVHPVHVLRINKMLSCAGADRLQTGMRGAFG 120
Query: 118 KPIGLAARLKKDQKVLSIRVNRQHLKFAIEGARRAAMKFP 157
KP G AR+ Q +LS+R + K A E RRA KFP
Sbjct: 121 KPQGTCARVDIGQVLLSVRCKESNAKHAEEALRRAKFKFP 160
>sp|Q09533|RL10_CAEEL 60S RIBOSOMAL PROTEIN L10 (QM PROTEIN HOMOLOG)
>gi|7498787|pir||T20688 hypothetical protein F10B5.1 -
Caenorhabditis elegans >gi|3875709|emb|CAA88308.1|
(Z48334) contains similarity to Pfam domain: PF00826
(Ribosomal L10), Score=479.8, E-value=7e-141, N=1~cDNA
EST EMBL:T00732 comes from this gene; cDNA EST
EMBL:T00733 comes from this gene~cDNA EST yk65a11.5
comes from this gene; cDNA EST yk65a11.3 come>
Length = 214
Score = 118 bits (293), Expect = 4e-26
Identities = 63/160 (39%), Positives = 90/160 (55%), Gaps = 3/160 (1%)
Query: 1 MALRPAKIDRYVDKPAYTRREYIRGAPGPKITIFDMGNPAGDFE-FEVALHV--SQPVQI 57
M RPA+ RY+ Y + + RG P KI IFD+GN + + F +H+ ++ +
Sbjct: 1 MGRRPARCYRYIKNKPYPKSRFCRGVPDAKIRIFDLGNKRANVDTFPACVHMMSNEREHL 60
Query: 58 RQNALEAARQQVNRYLQKNVGRSNYHFKIRVYPFQVLRENPMATGRKADRYGNGMRRPFG 117
ALEAAR N+Y+ KN G+ +H ++R +PF V R N M + ADR GMR +G
Sbjct: 61 SSEALEAARICANKYMVKNCGKDGFHLRVRKHPFHVTRINKMLSCAGADRLQTGMRGAYG 120
Query: 118 KPIGLAARLKKDQKVLSIRVNRQHLKFAIEGARRAAMKFP 157
KP GL AR+ + S+R+ ++K AIE RRA KFP
Sbjct: 121 KPQGLVARVDIGDILFSMRIKEGNVKHAIEAFRRAKFKFP 160
>emb|CAB88272.1| (AL353014) 60s ribosomal protein l10 [Schizosaccharomyces pombe]
Length = 221
Score = 118 bits (292), Expect = 5e-26
Identities = 68/160 (42%), Positives = 89/160 (55%), Gaps = 3/160 (1%)
Query: 1 MALRPAKIDRYVDKPAYTRREYIRGAPGPKITIFDMGNP-AGDFEFEVALHV--SQPVQI 57
MA RPA+ RY Y + Y R P KI IFD+G AG EF + +H+ ++ QI
Sbjct: 1 MARRPARCYRYCKNKPYPKSRYNRAVPDSKIRIFDLGRKRAGVDEFPLCIHLVSNEYEQI 60
Query: 58 RQNALEAARQQVNRYLQKNVGRSNYHFKIRVYPFQVLRENPMATGRKADRYGNGMRRPFG 117
ALEAAR N+YL K G+ ++H ++R +PF V+R N M + ADR GMR FG
Sbjct: 61 TSEALEAARICANKYLVKIGGKDSFHLRVRAHPFHVVRINKMLSCAGADRLQTGMRHAFG 120
Query: 118 KPIGLAARLKKDQKVLSIRVNRQHLKFAIEGARRAAMKFP 157
KP GL AR+ Q ++S+R AIE RR KFP
Sbjct: 121 KPNGLVARVNIGQVLMSVRTKDSSRATAIEALRRCQYKFP 160
>pir||JC4755 ribosomal protein L10.e, cytosolic - fission yeast
(Schizosaccharomyces pombe) >gi|1141786|gb|AAB03806.1|
(U33214) Spqm [Schizosaccharomyces pombe]
Length = 232
Score = 117 bits (291), Expect = 7e-26
Identities = 68/160 (42%), Positives = 89/160 (55%), Gaps = 3/160 (1%)
Query: 1 MALRPAKIDRYVDKPAYTRREYIRGAPGPKITIFDMGNP-AGDFEFEVALHV--SQPVQI 57
MA RPA+ RY Y + Y R P KI IFD+G AG EF + +H+ ++ QI
Sbjct: 1 MARRPARCYRYCKNKPYPKSRYNRAVPDSKIRIFDLGRKRAGVDEFPLCIHLVSNEYEQI 60
Query: 58 RQNALEAARQQVNRYLQKNVGRSNYHFKIRVYPFQVLRENPMATGRKADRYGNGMRRPFG 117
ALEAAR N+YL K G+ ++H ++R +PF V+R N M + ADR GMR FG
Sbjct: 61 TSEALEAARFCANKYLVKIGGKDSFHLRVRAHPFHVVRINKMLSCAGADRLQTGMRHAFG 120
Query: 118 KPIGLAARLKKDQKVLSIRVNRQHLKFAIEGARRAAMKFP 157
KP GL AR+ Q ++S+R AIE RR KFP
Sbjct: 121 KPNGLVARVNIGQILMSVRTKDSSRATAIEALRRCQYKFP 160
>sp|O22431|RL10_PINTA 60S RIBOSOMAL PROTEIN L10 (WILM'S TUMOR SUPRESSOR HOMOLOG)
>gi|7447295|pir||T07957 probable ribosomal protein L10.e
- loblolly pine >gi|2317762|gb|AAB66347.1| (AF013804)
Wilm's tumor supressor homolog [Pinus taeda]
Length = 228
Score = 117 bits (291), Expect = 7e-26
Identities = 66/160 (41%), Positives = 84/160 (52%), Gaps = 3/160 (1%)
Query: 1 MALRPAKIDRYVDKPAYTRREYIRGAPGPKITIFDMGNP---AGDFEFEVALHVSQPVQI 57
M RPA+ R + Y + Y RG P PKI IFD+G +F F V L + +
Sbjct: 1 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIFDVGAKKRLVDEFPFCVHLVSWEKENV 60
Query: 58 RQNALEAARQQVNRYLQKNVGRSNYHFKIRVYPFQVLRENPMATGRKADRYGNGMRRPFG 117
ALEA R N+Y+ K G+ +H ++RV+PF VLR N M + ADR GMR FG
Sbjct: 61 SSEALEAGRIACNKYMVKFAGKDGFHLRVRVHPFHVLRSNKMLSCAGADRLQTGMRGAFG 120
Query: 118 KPIGLAARLKKDQKVLSIRVNRQHLKFAIEGARRAAMKFP 157
KP G AR+ Q +LS+R H A E RRA KFP
Sbjct: 121 KPQGTCARVAIGQVLLSVRSRDNHSNHAQEALRRAKFKFP 160
>gb|AAC98301.1| (AF099012) QM protein [Bombyx mandarina]
Length = 219
Score = 117 bits (291), Expect = 7e-26
Identities = 65/160 (40%), Positives = 87/160 (53%), Gaps = 3/160 (1%)
Query: 1 MALRPAKIDRYVDKPAYTRREYIRGAPGPKITIFDMGNPAG---DFEFEVALHVSQPVQI 57
M RPA+ RY Y + + RG P PKI IFD+G DF V L + Q+
Sbjct: 1 MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRANVDDFPLCVHLVSDEYEQL 60
Query: 58 RQNALEAARQQVNRYLQKNVGRSNYHFKIRVYPFQVLRENPMATGRKADRYGNGMRRPFG 117
ALEA R N+YL KN G+ +H ++R++PF V+R N M + ADR GMR FG
Sbjct: 61 SSEALEAGRICCNKYLVKNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFG 120
Query: 118 KPIGLAARLKKDQKVLSIRVNRQHLKFAIEGARRAAMKFP 157
KP G AR++ Q ++S+R + + IE RRA KFP
Sbjct: 121 KPQGTVARVRIGQPIMSVRSSDRWKAQVIEALRRAKFKFP 160
>sp|Q09127|RL10_SCHPO 60S RIBOSOMAL PROTEIN L10 (QM PROTEIN HOMOLOG) (SPQM)
>gi|7490006|pir||T39755 60s ribosomal protein l10 -
fission yeast (Schizosaccharomyces pombe)
>gi|4107323|emb|CAA22664.1| (AL035077) 60s ribosomal
protein l10 [Schizosaccharomyces pombe]
Length = 221
Score = 117 bits (291), Expect = 7e-26
Identities = 68/160 (42%), Positives = 89/160 (55%), Gaps = 3/160 (1%)
Query: 1 MALRPAKIDRYVDKPAYTRREYIRGAPGPKITIFDMGNP-AGDFEFEVALHV--SQPVQI 57
MA RPA+ RY Y + Y R P KI IFD+G AG EF + +H+ ++ QI
Sbjct: 1 MARRPARCYRYCKNKPYPKSRYNRAVPDSKIRIFDLGRKRAGVDEFPLCIHLVSNEYEQI 60
Query: 58 RQNALEAARQQVNRYLQKNVGRSNYHFKIRVYPFQVLRENPMATGRKADRYGNGMRRPFG 117
ALEAAR N+YL K G+ ++H ++R +PF V+R N M + ADR GMR FG
Sbjct: 61 TSEALEAARICANKYLVKIGGKDSFHLRVRAHPFHVVRINKMLSCAGADRLQTGMRHAFG 120
Query: 118 KPIGLAARLKKDQKVLSIRVNRQHLKFAIEGARRAAMKFP 157
KP GL AR+ Q ++S+R AIE RR KFP
Sbjct: 121 KPNGLVARVNIGQILMSVRTKDSSRATAIEALRRCQYKFP 160
>gi|5174431 ribosomal protein L10; QM gene; DNA segment on chromosome X
(unique) 648 expressed sequence [Homo sapiens]
>gi|11419894|ref|XP_010156.1| ribosomal protein L10
[Homo sapiens] >gi|131762|sp|P27635|RL10_HUMAN 60S
RIBOSOMAL PROTEIN L10 (QM PROTEIN) (TUMOR SUPPRESSOR QM)
(LAMININ RECEPTOR HOMOLOG) >gi|476815|pir||A42735
ribosomal protein L10, cytosolic - human
>gi|184407|gb|AAA36021.1| (M81806) Q1Z 7F5 [Homo
sapiens] >gi|189266|gb|AAA36378.1| (M73791) may code for
Wilm's tumor-related protein [Homo sapiens]
>gi|190814|gb|AAA63253.1| (M64241) Wilm's tumor-related
protein [Homo sapiens] >gi|402827|gb|AAB27665.1|
(S64169) QM [human, nontumorigenic Wilms' microcell
hybrid cells, Peptide, 214 aa] [Homo sapiens]
>gi|1203971|gb|AAA92646.1| (L44140) QM [Homo sapiens]
Length = 214
Score = 116 bits (289), Expect = 1e-25
Identities = 67/172 (38%), Positives = 92/172 (52%), Gaps = 3/172 (1%)
Query: 1 MALRPAKIDRYVDKPAYTRREYIRGAPGPKITIFDMGNPAGDF-EFEVALHV--SQPVQI 57
M RPA+ RY Y + + RG P KI IFD+G EF + H+ + Q+
Sbjct: 1 MGRRPARCYRYCKNKPYPKSRFCRGVPDAKIRIFDLGRKKAKVDEFPLCGHMVSDEYEQL 60
Query: 58 RQNALEAARQQVNRYLQKNVGRSNYHFKIRVYPFQVLRENPMATGRKADRYGNGMRRPFG 117
ALEAAR N+Y+ K+ G+ +H ++R++PF V+R N M + ADR GMR FG
Sbjct: 61 SSEALEAARICANKYMVKSCGKDGFHIRVRLHPFHVIRINKMLSCAGADRLQTGMRGAFG 120
Query: 118 KPIGLAARLKKDQKVLSIRVNRQHLKFAIEGARRAAMKFPVKCYYRIYDKEG 169
KP G AR+ Q ++SIR Q+ + IE RRA KFP + I K G
Sbjct: 121 KPQGTVARVHIGQVIMSIRTKLQNKEHVIEALRRAKFKFPGRQKIHISKKWG 172
>sp|P45634|RL10_MOUSE 60S RIBOSOMAL PROTEIN L10 (QM PROTEIN HOMOLOG)
>gi|543339|pir||JC2013 ribosomal protein L10, cytosolic
- mouse >gi|2143959|pir||JC4911 ribosomal protein L10,
cytosolic [validated] - rat >gi|407466|emb|CAA53061.1|
(X75312) QM protein [Mus musculus]
>gi|410742|gb|AAA16894.1| (M93980) 24.6 kda protein [Mus
musculus] >gi|1854567|emb|CAA60587.1| (X87106) ribosomal
protein L10 [Rattus norvegicus]
Length = 214
Score = 116 bits (289), Expect = 1e-25
Identities = 67/172 (38%), Positives = 92/172 (52%), Gaps = 3/172 (1%)
Query: 1 MALRPAKIDRYVDKPAYTRREYIRGAPGPKITIFDMGNPAGDF-EFEVALHV--SQPVQI 57
M RPA+ RY Y + + RG P KI IFD+G EF + H+ + Q+
Sbjct: 1 MGRRPARCYRYCKNKPYPKSRFCRGVPDAKIRIFDLGRKKAKVDEFPLCGHMVSDEYEQL 60
Query: 58 RQNALEAARQQVNRYLQKNVGRSNYHFKIRVYPFQVLRENPMATGRKADRYGNGMRRPFG 117
ALEAAR N+Y+ K+ G+ +H ++R++PF V+R N M + ADR GMR FG
Sbjct: 61 SSEALEAARICANKYMVKSCGKDGFHIRVRLHPFHVIRINKMLSCAGADRLQTGMRGAFG 120
Query: 118 KPIGLAARLKKDQKVLSIRVNRQHLKFAIEGARRAAMKFPVKCYYRIYDKEG 169
KP G AR+ Q ++SIR Q+ + IE RRA KFP + I K G
Sbjct: 121 KPQGTVARVHIGQVIMSIRTKLQNKEHVIEALRRAKFKFPGRQKIHISKKWG 172
>sp|O61231|RL10_DROME 60S RIBOSOMAL PROTEIN L10 (QM PROTEIN HOMOLOG) (DQM)
>gi|3123840|gb|AAC16108.1| (U49721) QM homolog
[Drosophila melanogaster] >gi|7289746|gb|AAF45440.1|
(AE002786) Qm gene product [alt 1] [Drosophila
melanogaster]
Length = 218
Score = 116 bits (287), Expect = 2e-25
Identities = 63/160 (39%), Positives = 89/160 (55%), Gaps = 3/160 (1%)
Query: 1 MALRPAKIDRYVDKPAYTRREYIRGAPGPKITIFDMGNPAGDFE-FEVALHV--SQPVQI 57
M RPA+ RY Y + + RG P PKI IFD+G E F + +H+ + Q+
Sbjct: 1 MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGRKKATVEDFPLCVHLVSDEYEQL 60
Query: 58 RQNALEAARQQVNRYLQKNVGRSNYHFKIRVYPFQVLRENPMATGRKADRYGNGMRRPFG 117
ALEA R N+YL K G+ +H ++R++PF V+R N M + ADR GMR FG
Sbjct: 61 SSEALEAGRICCNKYLVKYCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFG 120
Query: 118 KPIGLAARLKKDQKVLSIRVNRQHLKFAIEGARRAAMKFP 157
KP G AR++ Q ++S+R + ++ IE RRA KFP
Sbjct: 121 KPQGTVARVRIGQPIMSVRSSDRYKAQVIEALRRAKFKFP 160
>sp|Q40649|R103_ORYSA 60S RIBOSOMAL PROTEIN L10-3 (QM/R22) >gi|1293784|gb|AAA98698.1|
(U55048) similar to human QM protein, a putative tumor
supressor, and to maize ubiquinol-cytochrome C reductase
complex subunit VI requiring protein SC34 [Oryza sativa]
Length = 219
Score = 115 bits (286), Expect = 3e-25
Identities = 65/160 (40%), Positives = 87/160 (53%), Gaps = 3/160 (1%)
Query: 1 MALRPAKIDRYVDKPAYTRREYIRGAPGPKITIFDMG-NPAGDFEFEVALHVS--QPVQI 57
M RPA+ R + Y + Y RG P PKI I+D+G G EF +H+ + +
Sbjct: 1 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFSHCVHLVSWEKENV 60
Query: 58 RQNALEAARQQVNRYLQKNVGRSNYHFKIRVYPFQVLRENPMATGRKADRYGNGMRRPFG 117
ALEAAR N+Y+ K+ G+ +H ++RV+PF VLR N M + ADR GMR FG
Sbjct: 61 TSEALEAARIACNKYMTKSAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
Query: 118 KPIGLAARLKKDQKVLSIRVNRQHLKFAIEGARRAAMKFP 157
KP G AR+ Q +LS+R + A E RRA KFP
Sbjct: 121 KPQGTCARVDIGQVLLSVRCKPNNAVHASEALRRAKFKFP 160
>gb|AAD33912.1|AF143815_1 (AF143815) ribosomal protein [Bos taurus]
Length = 214
Score = 115 bits (286), Expect = 3e-25
Identities = 66/172 (38%), Positives = 92/172 (53%), Gaps = 3/172 (1%)
Query: 1 MALRPAKIDRYVDKPAYTRREYIRGAPGPKITIFDMGNPAGDF-EFEVALHV--SQPVQI 57
M RPA+ RY Y + + RG P KI IFD+G EF + H+ + Q+
Sbjct: 1 MGRRPARCYRYCKNKPYPKSRFCRGVPDAKIRIFDLGRKKAKVDEFPLCGHMVSDEYEQL 60
Query: 58 RQNALEAARQQVNRYLQKNVGRSNYHFKIRVYPFQVLRENPMATGRKADRYGNGMRRPFG 117
ALEAAR N+Y+ K+ G+ +H ++R++PF V+R N M + ADR GMR FG
Sbjct: 61 SSEALEAARICANKYMVKSCGKDGFHIRVRLHPFHVIRINKMLSCAGADRLQTGMRGAFG 120
Query: 118 KPIGLAARLKKDQKVLSIRVNRQHLKFAIEGARRAAMKFPVKCYYRIYDKEG 169
KP G A++ Q ++SIR Q+ + IE RRA KFP + I K G
Sbjct: 121 KPQGTVAKVHIGQVIMSIRTKLQNKEHVIEALRRAKFKFPGRQKIHISKKWG 172
>gb|AAF43932.1|AC012188_9 (AC012188) Strong similarity, practically identical, to a 60S
Ribosomal Protein L10 (Wilm's Tumor Suppressor Protein
Homolog) from Arabidopsis thaliana gi|1172806, and
contains a Ribosomal L10 PF|00826 domain. ESTs
gb|Z18472, gb|T76209, gb|N65098, gb|>
Length = 220
Score = 115 bits (285), Expect = 4e-25
Identities = 66/160 (41%), Positives = 86/160 (53%), Gaps = 3/160 (1%)
Query: 1 MALRPAKIDRYVDKPAYTRREYIRGAPGPKITIFDMG---NPAGDFEFEVALHVSQPVQI 57
M RPA+ R + Y + Y RG P PKI I+D+G +F F V L + +
Sbjct: 1 MGRRPARCYRQIKGKPYPKSRYCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENV 60
Query: 58 RQNALEAARQQVNRYLQKNVGRSNYHFKIRVYPFQVLRENPMATGRKADRYGNGMRRPFG 117
ALEAAR N+Y+ K+ G+ +H +IRV+PF VLR N M + ADR GMR FG
Sbjct: 61 SSEALEAARIACNKYMVKSAGKDAFHLRIRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
Query: 118 KPIGLAARLKKDQKVLSIRVNRQHLKFAIEGARRAAMKFP 157
K +G AR+ Q +LS+R H A E RRA KFP
Sbjct: 121 KALGTCARVAIGQVLLSVRCKDAHGHHAQEALRRAKFKFP 160
>gb|AAD14497.1| (AC005508) 29621 [Arabidopsis thaliana]
Length = 221
Score = 115 bits (284), Expect = 5e-25
Identities = 66/160 (41%), Positives = 87/160 (54%), Gaps = 3/160 (1%)
Query: 1 MALRPAKIDRYVDKPAYTRREYIRGAPGPKITIFDMG-NPAGDFEFEVALHVS--QPVQI 57
M RPA+ R + Y + Y RG P PKI I+D+G G EF +H+ + +
Sbjct: 1 MGRRPARCYRQIKGKPYPKSRYCRGVPDPKIRIYDVGMKRKGVDEFPYCVHLVSWEKENV 60
Query: 58 RQNALEAARQQVNRYLQKNVGRSNYHFKIRVYPFQVLRENPMATGRKADRYGNGMRRPFG 117
ALEAAR N+Y+ K+ G+ +H +IRV+PF VLR N M + ADR GMR FG
Sbjct: 61 SSEALEAARIACNKYMVKSAGKDAFHLRIRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
Query: 118 KPIGLAARLKKDQKVLSIRVNRQHLKFAIEGARRAAMKFP 157
K +G AR+ Q +LS+R H A E RRA KFP
Sbjct: 121 KALGTCARVAIGQVLLSVRCKDAHGHHAQEALRRAKFKFP 160
>gb|AAD56018.1|AF180758_1 (AF180758) 60S ribosomal protein L10 [Vitis riparia]
Length = 220
Score = 115 bits (284), Expect = 5e-25
Identities = 65/162 (40%), Positives = 86/162 (52%), Gaps = 3/162 (1%)
Query: 1 MALRPAKIDRYVDKPAYTRREYIRGAPGPKITIFDMG---NPAGDFEFEVALHVSQPVQI 57
M RPA+ R + Y + Y RG P PKI I+D+G +F F V L + +
Sbjct: 1 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60
Query: 58 RQNALEAARQQVNRYLQKNVGRSNYHFKIRVYPFQVLRENPMATGRKADRYGNGMRRPFG 117
ALEAAR N+Y+ K G+ +H ++RV+PF VLR N M + ADR GMR FG
Sbjct: 61 SSEALEAARIACNKYMTKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
Query: 118 KPIGLAARLKKDQKVLSIRVNRQHLKFAIEGARRAAMKFPVK 159
KP G AR+ Q +LS+R + A E RRA KFP +
Sbjct: 121 KPQGTCARVSIGQVLLSVRCKDGNSHHAQEALRRAKFKFPAR 162
>sp|P93847|RL10_SOLME 60S RIBOSOMAL PROTEIN L10 (EQM) >gi|1902894|dbj|BAA19462.1|
(AB001891) QM family protein [Solanum melongena]
Length = 219
Score = 114 bits (283), Expect = 6e-25
Identities = 64/160 (40%), Positives = 87/160 (54%), Gaps = 3/160 (1%)
Query: 1 MALRPAKIDRYVDKPAYTRREYIRGAPGPKITIFDMG---NPAGDFEFEVALHVSQPVQI 57
M RPA+ R + Y + + RG P PKI I+D+G +F F V L + +
Sbjct: 1 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENV 60
Query: 58 RQNALEAARQQVNRYLQKNVGRSNYHFKIRVYPFQVLRENPMATGRKADRYGNGMRRPFG 117
ALEAAR N+Y+ K+ G+ +H ++RV+PF VLR N M + ADR GMR FG
Sbjct: 61 SSEALEAARIACNKYMTKSAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
Query: 118 KPIGLAARLKKDQKVLSIRVNRQHLKFAIEGARRAAMKFP 157
KP G+ AR+ Q +LS+R + A E RRA KFP
Sbjct: 121 KPQGVCARVAIGQVLLSVRCKDGNSNHAQEALRRAKFKFP 160
>gb|AAG17477.1|AF106846_1 (AF106846) QM protein [Oryza sativa]
Length = 214
Score = 114 bits (282), Expect = 8e-25
Identities = 64/160 (40%), Positives = 86/160 (53%), Gaps = 3/160 (1%)
Query: 1 MALRPAKIDRYVDKPAYTRREYIRGAPGPKITIFDMGNP---AGDFEFEVALHVSQPVQI 57
M RPA+ R + Y + Y RG P PKI IFD+G A DF V L + +
Sbjct: 1 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIFDVGQKKRSADDFPLCVHLVSWEKENV 60
Query: 58 RQNALEAARQQVNRYLQKNVGRSNYHFKIRVYPFQVLRENPMATGRKADRYGNGMRRPFG 117
ALEAAR N+Y+ K+ G+ +H ++R +P+ VLR N M + ADR GM FG
Sbjct: 61 SSEALEAARIACNKYMAKHAGKDAFHLRVRAHPYHVLRINKMLSCAGADRLQTGMAGAFG 120
Query: 118 KPIGLAARLKKDQKVLSIRVNRQHLKFAIEGARRAAMKFP 157
KP G+ AR++ Q +LS+R + A E RRA KFP
Sbjct: 121 KPQGVCARVRIGQVLLSVRCATRTAAHAQEALRRAKFKFP 160
>gb|AAG27431.1| (AF295636) QM-like protein [Elaeis guineensis]
Length = 224
Score = 114 bits (282), Expect = 8e-25
Identities = 65/160 (40%), Positives = 85/160 (52%), Gaps = 3/160 (1%)
Query: 1 MALRPAKIDRYVDKPAYTRREYIRGAPGPKITIFDMG---NPAGDFEFEVALHVSQPVQI 57
M RPA+ R + Y + Y RG P PKI I+D+G +F F V L + +
Sbjct: 1 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60
Query: 58 RQNALEAARQQVNRYLQKNVGRSNYHFKIRVYPFQVLRENPMATGRKADRYGNGMRRPFG 117
ALEAAR N+Y+ K G+ +H ++RV+PF VLR N M + ADR GMR FG
Sbjct: 61 SSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
Query: 118 KPIGLAARLKKDQKVLSIRVNRQHLKFAIEGARRAAMKFP 157
KP G AR+ Q +LS+R + A E RRA KFP
Sbjct: 121 KPQGTCARVMIGQVLLSVRCKDGNSNHAQEALRRAKFKFP 160
>sp|Q08200|RL10_CHICK 60S RIBOSOMAL PROTEIN L10 (JUN-BINDING PROTEIN JIF-1)
>gi|539512|pir||A48226 ribosomal protein L10, cytosolic
- chicken (fragment) >gi|387587|gb|AAA48928.1| (L13234)
Jun-binding protein [Gallus gallus]
Length = 210
Score = 114 bits (282), Expect = 8e-25
Identities = 63/163 (38%), Positives = 88/163 (53%), Gaps = 3/163 (1%)
Query: 10 RYVDKPAYTRREYIRGAPGPKITIFDMGNPAGDF-EFEVALHV--SQPVQIRQNALEAAR 66
RY Y + + RG P PKI IFD+G EF + H+ + Q+ ALEAAR
Sbjct: 5 RYCKNKPYPKSRFCRGVPDPKIRIFDLGRKKAKVDEFPLCGHMVSDEYEQLSSEALEAAR 64
Query: 67 QQVNRYLQKNVGRSNYHFKIRVYPFQVLRENPMATGRKADRYGNGMRRPFGKPIGLAARL 126
N+Y+ K+ G+ +H ++R++PF V+R N M + ADR GMR FGKP G AR+
Sbjct: 65 ICANKYMVKSCGKDGFHIRVRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARV 124
Query: 127 KKDQKVLSIRVNRQHLKFAIEGARRAAMKFPVKCYYRIYDKEG 169
Q ++SIR Q+ + +E RRA KFP + I K G
Sbjct: 125 HMGQVIMSIRTKAQNKEHVVEALRRAKFKFPGRQKIHISKKWG 167
>gi|6323104 Ribosomal protein L10; Ubiquinol-cytochrome C reductase complex
subunit VI requiring protein; Rpl10p [Saccharomyces
cerevisiae] >gi|1172812|sp|P41805|RL10_YEAST 60S
RIBOSOMAL PROTEIN L10 (L9) (UBIQUINOL-CYTOCHROME C
REDUCTASE COMPLEX SUBUNIT VI REQUIRING PROTEIN)
>gi|1362451|pir||A57296 ribosomal protein L10.e,
cytosolic - yeast (Saccharomyces cerevisiae)
>gi|606619|gb|AAA81534.1| (U06952) Qsr1p [Saccharomyces
cerevisiae] >gi|747904|emb|CAA55485.1| (X78887) GRC5
[Saccharomyces cerevisiae] >gi|1360434|emb|CAA97632.1|
(Z73247) ORF YLR075w [Saccharomyces cerevisiae]
Length = 221
Score = 114 bits (282), Expect = 8e-25
Identities = 65/160 (40%), Positives = 88/160 (54%), Gaps = 3/160 (1%)
Query: 1 MALRPAKIDRYVDKPAYTRREYIRGAPGPKITIFDMGNPAGDF-EFEVALHV--SQPVQI 57
MA RPA+ RY Y + Y R P KI I+D+G EF + +H+ ++ Q+
Sbjct: 1 MARRPARCYRYQKNKPYPKSRYNRAVPDSKIRIYDLGKKKATVDEFPLCVHLVSNELEQL 60
Query: 58 RQNALEAARQQVNRYLQKNVGRSNYHFKIRVYPFQVLRENPMATGRKADRYGNGMRRPFG 117
ALEAAR N+Y+ GR +H ++RV+PF VLR N M + ADR GMR +G
Sbjct: 61 SSEALEAARICANKYMTTVSGRDAFHLRVRVHPFHVLRINKMLSCAGADRLQQGMRGAWG 120
Query: 118 KPIGLAARLKKDQKVLSIRVNRQHLKFAIEGARRAAMKFP 157
KP GLAAR+ Q + S+R + +EG RRA KFP
Sbjct: 121 KPHGLAARVDIGQIIFSVRTKDSNKDVVVEGLRRARYKFP 160
>sp|P45633|RL10_MAIZE 60S RIBOSOMAL PROTEIN L10 (QM PROTEIN HOMOLOG)
>gi|7447294|pir||T02068 probable transcription factor QM
- maize >gi|468056|gb|AAA17419.1| (U06108) QM protein
[Zea mays]
Length = 220
Score = 112 bits (278), Expect = 2e-24
Identities = 64/162 (39%), Positives = 87/162 (53%), Gaps = 3/162 (1%)
Query: 1 MALRPAKIDRYVDKPAYTRREYIRGAPGPKITIFDMG-NPAGDFEFEVALHVS--QPVQI 57
M RPA+ R + + Y RG P PKI I+D+G G EF +H+ + +
Sbjct: 1 MGRRPARCYRQIKNKPCPKSRYCRGVPDPKIRIYDVGMKRKGVDEFPYCVHLVSWERENV 60
Query: 58 RQNALEAARQQVNRYLQKNVGRSNYHFKIRVYPFQVLRENPMATGRKADRYGNGMRRPFG 117
ALEAAR N+Y+ K+ G+ +H ++RV+PF VLR N M + ADR GMR FG
Sbjct: 61 SSEALEAARIVCNKYMTKSAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
Query: 118 KPIGLAARLKKDQKVLSIRVNRQHLKFAIEGARRAAMKFPVK 159
KP G AR+ Q +LS+R + A E RRA KFP +
Sbjct: 121 KPQGTCARVDIGQVLLSVRCKDNNAAHASEALRRAKFKFPAR 162
>gb|AAF34765.1|AF227620_1 (AF227620) 60S ribosomal protein L10 [Euphorbia esula]
Length = 220
Score = 112 bits (278), Expect = 2e-24
Identities = 64/160 (40%), Positives = 86/160 (53%), Gaps = 3/160 (1%)
Query: 1 MALRPAKIDRYVDKPAYTRREYIRGAPGPKITIFDMG---NPAGDFEFEVALHVSQPVQI 57
M RPA+ R + Y + + RG P PKI I+D+G +F F V L + +
Sbjct: 1 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60
Query: 58 RQNALEAARQQVNRYLQKNVGRSNYHFKIRVYPFQVLRENPMATGRKADRYGNGMRRPFG 117
ALEAAR N+Y+ K G+ +H ++RV+PF VLR N M + ADR GMR FG
Sbjct: 61 SSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
Query: 118 KPIGLAARLKKDQKVLSIRVNRQHLKFAIEGARRAAMKFP 157
KP G+ AR+ Q +LS+R + A E RRA KFP
Sbjct: 121 KPQGVCARVAIGQVLLSVRCKDNNSHNAQEALRRAKFKFP 160
>sp|Q08770|RL10_ARATH 60S RIBOSOMAL PROTEIN L10 (WILM'S TUMOR SUPPRESSOR PROTEIN HOMOLOG)
>gi|478401|pir||JQ2244 ribosomal protein L10.e,
cytosolic - Arabidopsis thaliana
>gi|17682|emb|CAA78856.1| (Z15157) Wilm's tumor
suppressor homologue [Arabidopsis thaliana]
Length = 220
Score = 112 bits (277), Expect = 3e-24
Identities = 65/160 (40%), Positives = 85/160 (52%), Gaps = 3/160 (1%)
Query: 1 MALRPAKIDRYVDKPAYTRREYIRGAPGPKITIFDMG---NPAGDFEFEVALHVSQPVQI 57
M RPA+ R + Y + Y RG P PKI I+D+G +F F V L + +
Sbjct: 1 MGRRPARCYRQIKGKPYPKSRYCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENV 60
Query: 58 RQNALEAARQQVNRYLQKNVGRSNYHFKIRVYPFQVLRENPMATGRKADRYGNGMRRPFG 117
ALEAAR N+Y+ K+ G+ +H +IRV+P VLR N M + ADR GMR FG
Sbjct: 61 SSEALEAARIACNKYMVKSAGKDAFHLRIRVHPSHVLRINKMLSCAGADRLQTGMRGAFG 120
Query: 118 KPIGLAARLKKDQKVLSIRVNRQHLKFAIEGARRAAMKFP 157
K +G AR+ Q +LS+R H A E RRA KFP
Sbjct: 121 KALGTCARVAIGQVLLSVRCKDAHGHHAQEALRRAKFKFP 160
>sp|P45636|R102_ORYSA 60S RIBOSOMAL PROTEIN L10-2 (PUTATIVE TUMOR SUPRESSOR SG12)
>gi|1076752|pir||S49596 ribosomal protein L10.e,
cytosolic - rice >gi|575357|emb|CAA57340.1| (X81692)
putative tumor supressor [Oryza sativa]
Length = 218
Score = 109 bits (269), Expect = 3e-23
Identities = 63/160 (39%), Positives = 86/160 (53%), Gaps = 4/160 (2%)
Query: 1 MALRPAKIDRYVDKPAYTRREYIRGAPGPKITIFDMG-NPAGDFEFEVALHVS--QPVQI 57
M RPA+ +R + Y + Y RG P PKI I+D+G G EF +H+ + +
Sbjct: 1 MGRRPARCNRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFSHCVHLVSWEKENV 60
Query: 58 RQNALEAARQQVNRYLQKNVGRSNYHFKIRVYPFQVLRENPMATGRKADRYGNGMRRPFG 117
ALEA N+Y+ K+ G+ +H ++RV+PF VLR N M + ADR GMR FG
Sbjct: 61 TSEALEAGIA-CNKYMTKSAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 119
Query: 118 KPIGLAARLKKDQKVLSIRVNRQHLKFAIEGARRAAMKFP 157
KP G AR+ Q +LS+R + A E RRA KFP
Sbjct: 120 KPQGTCARVDIGQVLLSVRCKPNNAVHASEALRRAKFKFP 159
>pdb|1FFK|F Chain F, Crystal Structure Of The Large Ribosomal Subunit From
Haloarcula Marismortui At 2.4 Angstrom Resolution
Length = 157
Score = 104 bits (256), Expect = 9e-22
Identities = 57/114 (50%), Positives = 69/114 (60%), Gaps = 12/114 (10%)
Query: 14 KPAYTRREYIRGAPGPKITIFDMGNPAGD--FEFEVALHVSQPVQIRQNALEAARQQVNR 71
KPAYTRREYI G PG I F MGN + +V V +PVQIR NALEAAR NR
Sbjct: 11 KPAYTRREYISGIPGKGIAQFKMGNNGAGPTYPAQVENVVEKPVQIRHNALEAARNAANR 70
Query: 72 YLQKNVGRSNYHFKIRVYPFQVLRENPMATGRKADRYGNGMRRPFGKPIGLAAR 125
++Q + +NY F+IR +PF V+RE G+GMR PFGK +G AAR
Sbjct: 71 FVQNSGAAANYKFRIRKFPFHVIREQD----------GDGMRAPFGKSVGTAAR 114
>gb|AAA99158.1| (U55212) Wilms' tumor-related protein QM [Oryza sativa]
Length = 173
Score = 92.1 bits (225), Expect = 4e-18
Identities = 47/101 (46%), Positives = 60/101 (58%)
Query: 57 IRQNALEAARQQVNRYLQKNVGRSNYHFKIRVYPFQVLRENPMATGRKADRYGNGMRRPF 116
+ ALEAAR N+Y+ KN G+ +H ++RV+PF VLR N M + ADR GMR F
Sbjct: 9 VSSEALEAARIACNKYMTKNAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAF 68
Query: 117 GKPIGLAARLKKDQKVLSIRVNRQHLKFAIEGARRAAMKFP 157
GKP G AR+ Q +LS+R + K A E RRA KFP
Sbjct: 69 GKPQGTCARVDIGQVLLSVRCKESNAKHAEEALRRAKFKFP 109
>gb|AAC36512.1| (U89405) QM protein [Mus musculus]
Length = 135
Score = 91.3 bits (223), Expect = 7e-18
Identities = 52/130 (40%), Positives = 73/130 (56%), Gaps = 3/130 (2%)
Query: 31 ITIFDMGNPAGDF-EFEVALHV--SQPVQIRQNALEAARQQVNRYLQKNVGRSNYHFKIR 87
I IFD+G EF + H+ + Q+ ALEAAR N+Y+ ++ G+ +H ++R
Sbjct: 1 IRIFDLGRKKAKVDEFPLCGHMVSDEYEQLSSEALEAARICANKYMVESCGKDGFHIRVR 60
Query: 88 VYPFQVLRENPMATGRKADRYGNGMRRPFGKPIGLAARLKKDQKVLSIRVNRQHLKFAIE 147
++PF V+R N M + ADR GMR FGKP G R+ Q ++SIR Q IE
Sbjct: 61 LHPFHVIRINMMLSCAGADRLQTGMRGAFGKPQGTVVRVHIGQVIISIRSKLQTKVHVIE 120
Query: 148 GARRAAMKFP 157
G RRA+ KFP
Sbjct: 121 GLRRASFKFP 130
>pir||JN0273 ribosomal protein L10, cytosolic - human (fragment)
>gi|249371|gb|AAB22173.1| (S35960) laminin receptor
homolog [human, Peptide Partial, 153 aa] [Homo sapiens]
Length = 153
Score = 89.7 bits (219), Expect = 2e-17
Identities = 49/125 (39%), Positives = 68/125 (54%), Gaps = 3/125 (2%)
Query: 1 MALRPAKIDRYVDKPAYTRREYIRGAPGPKITIFDMGNPAGDF-EFEVALHV--SQPVQI 57
M RPA+ RY Y + + RG P KI IFD+G EF + H+ + Q+
Sbjct: 7 MGRRPARCYRYCKNKPYPKSRFCRGVPDAKIRIFDLGRKKAKVDEFPLCGHMVSDEYEQL 66
Query: 58 RQNALEAARQQVNRYLQKNVGRSNYHFKIRVYPFQVLRENPMATGRKADRYGNGMRRPFG 117
ALEAAR N+Y+ K+ G+ +H ++R++PF V+R N M + ADR GMR FG
Sbjct: 67 SSEALEAARICANKYMVKSCGKDGFHIRVRLHPFHVIRINKMLSCAGADRLQTGMRGAFG 126
Query: 118 KPIGL 122
KP L
Sbjct: 127 KPQAL 131
>gb|AAG27854.1|AC079285_7 (AC079285) 60S ribosomal protein L10, putative [Arabidopsis
thaliana]
Length = 184
Score = 89.3 bits (218), Expect = 3e-17
Identities = 50/116 (43%), Positives = 65/116 (55%)
Query: 42 DFEFEVALHVSQPVQIRQNALEAARQQVNRYLQKNVGRSNYHFKIRVYPFQVLRENPMAT 101
+F F V L + + ALEAAR N+Y+ K+ G+ +H +IRV+PF VLR N M +
Sbjct: 8 EFPFCVHLVSWEKENVSSEALEAARIACNKYMVKSAGKDAFHLRIRVHPFHVLRINKMLS 67
Query: 102 GRKADRYGNGMRRPFGKPIGLAARLKKDQKVLSIRVNRQHLKFAIEGARRAAMKFP 157
ADR GMR FGK +G AR+ Q +LS+R H A E RRA KFP
Sbjct: 68 CAGADRLQTGMRGAFGKALGTCARVAIGQVLLSVRCKDNHGVHAQEALRRAKFKFP 123
>dbj|BAA19414.1| (AB001582) QM family protein [Solanum melongena]
Length = 137
Score = 76.1 bits (184), Expect = 3e-13
Identities = 38/88 (43%), Positives = 53/88 (60%)
Query: 70 NRYLQKNVGRSNYHFKIRVYPFQVLRENPMATGRKADRYGNGMRRPFGKPIGLAARLKKD 129
++Y+ K+ G+ +H ++RV+PF VLR N M + ADR GMR FGKP G+ AR+
Sbjct: 2 SKYMTKSTGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGVCARVAIG 61
Query: 130 QKVLSIRVNRQHLKFAIEGARRAAMKFP 157
Q +LS+R + A E RRA KFP
Sbjct: 62 QVLLSVRCKDGNSNHAQEALRRAKFKFP 89
>sp|Q40592|RL10_TOBAC 60S RIBOSOMAL PROTEIN L10 (QM PROTEIN HOMOLOG)
>gi|629704|pir||S44144 ribosomal protein L10.e,
cytosolic - common tobacco (fragment)
>gi|473104|emb|CAA78461.1| (Z14083) HOMOLOGIE with Human
WILM's tumor-related protein HUMQM [Nicotiana tabacum]
Length = 150
Score = 70.2 bits (169), Expect = 1e-11
Identities = 36/82 (43%), Positives = 48/82 (57%)
Query: 76 NVGRSNYHFKIRVYPFQVLRENPMATGRKADRYGNGMRRPFGKPIGLAARLKKDQKVLSI 135
+ G+ +H ++RV+PF VLR N M + ADR GMR FGKP G+ AR+ Q +LS+
Sbjct: 8 SAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGVCARVAIGQVLLSV 67
Query: 136 RVNRQHLKFAIEGARRAAMKFP 157
R + A E RRA KFP
Sbjct: 68 RCKDGNANHAQEALRRAKFKFP 89
>pir||S19224 ribosomal protein L10.e, cytosolic - rice (fragment)
>gi|20312|emb|CAA45905.1| (X64621) unknown [Oryza
sativa]
Length = 143
Score = 69.5 bits (167), Expect = 2e-11
Identities = 36/80 (45%), Positives = 46/80 (57%)
Query: 78 GRSNYHFKIRVYPFQVLRENPMATGRKADRYGNGMRRPFGKPIGLAARLKKDQKVLSIRV 137
G+ +H ++RV+PF VLR N M + ADR GMR FGKP G AR+ Q +LS+R
Sbjct: 5 GKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVDIGQVLLSVRC 64
Query: 138 NRQHLKFAIEGARRAAMKFP 157
+ A E RRA KFP
Sbjct: 65 KPNNAVHASEALRRAKFKFP 84
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.323 0.140 0.410
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 66135642
Number of Sequences: 2977
Number of extensions: 2622168
Number of successful extensions: 4454
Number of sequences better than 1.0e-10: 45
Number of HSP's better than 0.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 4376
Number of HSP's gapped (non-prelim): 46
length of query: 181
length of database: 189,106,746
effective HSP length: 53
effective length of query: 128
effective length of database: 157,386,935
effective search space: 20145527680
effective search space used: 20145527680
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.9 bits)
S2: 162 (67.5 bits)