BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB1445 (ptpS-like) DE:6-PYRUVOYL-TETRAHYDROPTERIN SYNTHASE
(115 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||C75052 6-pyruvoyl-tetrahydropterin synthase PAB1445 - Pyroc... 240 6e-63
pir||B71108 hypothetical protein PH0634 - Pyrococcus horikoshii ... 203 6e-52
pir||T44573 hypothetical protein 11 [imported] - Pyrococcus furi... 178 1e-44
pir||C72425 hypothetical protein TM0038 - Thermotoga maritima (s... 85 3e-16
gi|11498052 conserved hypothetical protein [Archaeoglobus fulgid... 74 7e-13
>pir||C75052 6-pyruvoyl-tetrahydropterin synthase PAB1445 - Pyrococcus abyssi
(strain Orsay) >gi|5458825|emb|CAB50312.1| (AJ248287)
6-PYRUVOYL-TETRAHYDROPTERIN SYNTHASE [Pyrococcus abyssi]
Length = 115
Score = 240 bits (605), Expect = 6e-63
Identities = 115/115 (100%), Positives = 115/115 (100%)
Query: 1 MRARIIVRTSFDAAHAVKIGDDWESLHGHTFFLEVAVEGEIKRGYIMDFTELRKIVDDIV 60
MRARIIVRTSFDAAHAVKIGDDWESLHGHTFFLEVAVEGEIKRGYIMDFTELRKIVDDIV
Sbjct: 1 MRARIIVRTSFDAAHAVKIGDDWESLHGHTFFLEVAVEGEIKRGYIMDFTELRKIVDDIV 60
Query: 61 KELNHRNLNKIFDNPTTENVALWIAEKVEEKLPHKVKLKRVVLWEGKDNGVELEW 115
KELNHRNLNKIFDNPTTENVALWIAEKVEEKLPHKVKLKRVVLWEGKDNGVELEW
Sbjct: 61 KELNHRNLNKIFDNPTTENVALWIAEKVEEKLPHKVKLKRVVLWEGKDNGVELEW 115
>pir||B71108 hypothetical protein PH0634 - Pyrococcus horikoshii
>gi|3257041|dbj|BAA29724.1| (AP000003) 115aa long
hypothetical protein [Pyrococcus horikoshii]
Length = 115
Score = 203 bits (511), Expect = 6e-52
Identities = 91/115 (79%), Positives = 105/115 (91%)
Query: 1 MRARIIVRTSFDAAHAVKIGDDWESLHGHTFFLEVAVEGEIKRGYIMDFTELRKIVDDIV 60
M++RIIVRTSFDAAHAVK+GD WE +HGHTFFLEVA+EGEIK GY+MDF ELRKIV++I
Sbjct: 1 MKSRIIVRTSFDAAHAVKVGDHWEDVHGHTFFLEVAIEGEIKNGYVMDFLELRKIVEEIT 60
Query: 61 KELNHRNLNKIFDNPTTENVALWIAEKVEEKLPHKVKLKRVVLWEGKDNGVELEW 115
KEL+HRNLN IF+NPTTEN+ALWI E++ +KLP VKLKRVVLWEGKDNGVELEW
Sbjct: 61 KELDHRNLNNIFENPTTENIALWIGERIRDKLPPYVKLKRVVLWEGKDNGVELEW 115
>pir||T44573 hypothetical protein 11 [imported] - Pyrococcus furiosus
>gi|6066246|gb|AAF03231.1|AF156097_11 (AF156097) ORF11
[Pyrococcus furiosus]
Length = 114
Score = 178 bits (448), Expect = 1e-44
Identities = 82/115 (71%), Positives = 99/115 (85%), Gaps = 1/115 (0%)
Query: 1 MRARIIVRTSFDAAHAVKIGDDWESLHGHTFFLEVAVEGEIKRGYIMDFTELRKIVDDIV 60
M+ARII R SFDAAHAVKI ++WE LHGHTF LEV VEGEIK+GY+MDF +L+K+VD +V
Sbjct: 1 MKARIIYRASFDAAHAVKI-EEWEELHGHTFSLEVVVEGEIKKGYVMDFLKLKKVVDGVV 59
Query: 61 KELNHRNLNKIFDNPTTENVALWIAEKVEEKLPHKVKLKRVVLWEGKDNGVELEW 115
KEL+HRNLNKI DNPTTEN+ALWI+E++ + LP VKLKR+ LWEG + GVELEW
Sbjct: 60 KELDHRNLNKIMDNPTTENIALWISERIRKNLPGDVKLKRLSLWEGNEFGVELEW 114
>pir||C72425 hypothetical protein TM0038 - Thermotoga maritima (strain MSB8)
>gi|4980523|gb|AAD35132.1|AE001691_6 (AE001691)
6-pyruvoyl tetrahydrobiopterin synthase, putative
[Thermotoga maritima]
Length = 120
Score = 84.7 bits (206), Expect = 3e-16
Identities = 45/111 (40%), Positives = 75/111 (67%), Gaps = 4/111 (3%)
Query: 5 IIVRTSFDAAHAV-KIGDDWESLHGHTFFLEVAVEGEI-KRGYIMDFTELRKIVDDIV-K 61
++ + SF+AAH + + E LHGHT+ L V +EG + + +MDF EL+KIV+++V
Sbjct: 3 LVKKFSFEAAHNLTRYLGKCERLHGHTYRLVVKIEGPLNEEEMVMDFAELKKIVEELVIS 62
Query: 62 ELNHRNLNKIFDNPTTENVALWIAEKVEEKLPHK-VKLKRVVLWEGKDNGV 111
+L+H LN +FD PTTE VA+WI +++ +++ + V+L + LWE + +GV
Sbjct: 63 KLDHSYLNDMFDQPTTERVAIWIWDQLSKEMEKRGVRLHEIELWETETSGV 113
>gi|11498052 conserved hypothetical protein [Archaeoglobus fulgidus]
>gi|6647938|sp|O29809|Y440_ARCFU HYPOTHETICAL PROTEIN
AF0440 >gi|7449208|pir||H69304 conserved hypothetical
protein AF0440 - Archaeoglobus fulgidus
>gi|2650193|gb|AAB90801.1| (AE001074) conserved
hypothetical protein [Archaeoglobus fulgidus]
Length = 115
Score = 73.7 bits (178), Expect = 7e-13
Identities = 38/108 (35%), Positives = 67/108 (61%), Gaps = 4/108 (3%)
Query: 7 VRTSFDAAHAVKIGDDWESLHGHTFFLEVAVEGEIKR-GYIMDFTELRKIVDDIVKELNH 65
+ TSF AAH++ +HGH F +EV + G++K G +MDF +L++IV+++V + +H
Sbjct: 9 ISTSFSAAHSIPGHKKCGKVHGHNFKVEVEISGKVKENGMVMDFFDLKRIVNEVVAKFDH 68
Query: 66 RNLNKIFDNPTTENVALWIAEKVEEKLPHKVKLKRVVLWEGKDNGVEL 113
LN+ + PT+EN+ L I ++ EK + ++RV + E +D E+
Sbjct: 69 TLLNEQIEIPTSENICLRIFSELAEK---GLNVRRVRVAENEDKWAEI 113
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.320 0.138 0.419
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 44446649
Number of Sequences: 2977
Number of extensions: 1668012
Number of successful extensions: 5522
Number of sequences better than 1.0e-10: 5
Number of HSP's better than 0.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 5515
Number of HSP's gapped (non-prelim): 5
length of query: 115
length of database: 189,106,746
effective HSP length: 50
effective length of query: 65
effective length of database: 159,182,396
effective search space: 10346855740
effective search space used: 10346855740
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.8 bits)
S2: 160 (66.7 bits)