BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB1470 (vorG) DE:keto-valine-ferredoxin oxidoreductase gamma
chain
(185 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||D75047 keto-valine-ferredoxin oxidoreductase gamma chain PA... 356 7e-98
sp|O58411|PORC_PYRHO PYRUVATE/KETOISOVALERATE OXIDOREDUCTASES CO... 345 2e-94
sp|Q51799|PORC_PYRFU PYRUVATE/KETOISOVALERATE OXIDOREDUCTASES CO... 335 1e-91
sp|Q57717|PORC_METJA PYRUVATE SYNTHASE SUBUNIT PORC (PYRUVATE OX... 217 9e-56
pir||G69099 probable pyruvate synthase (EC 1.2.7.1) gamma chain ... 214 4e-55
sp|O27772|PORC_METTH PYRUVATE SYNTHASE SUBUNIT PORC (PYRUVATE OX... 214 4e-55
gb|AAF91262.1|AF230199_4 (AF230199) pyruvate oxidoreductase delt... 209 1e-53
gi|11499289 pyruvate ferredoxin oxidoreductase, subunit gamma (p... 187 5e-47
emb|CAC11765.1| (AL445064) probable pyruvate ferredoxin oxidored... 173 1e-42
gb|AAK41456.1| Pyruvate synthase gamma chain (Pyruvic-ferredoxin... 151 6e-36
sp|O05650|PORC_THEMA PYRUVATE SYNTHASE SUBUNIT PORC (PYRUVATE OX... 151 6e-36
emb|CAA59455.1| (X85171) gamma subunit of pyruvate ferredoxin ox... 149 2e-35
gb|AAK42869.1| Pyruvate synthase gamma chain (Pyruvic-ferredoxin... 137 7e-32
pir||F71857 pyruvate ferrodoxin oxidoreductase - Helicobacter py... 131 5e-30
gb|AAC38204.1| (AF021092) PorC subunit of pyruvate:flavodoxin ox... 129 2e-29
pir||D64658 pyruvate ferredoxin oxidoreductase, gamma subunit - ... 128 4e-29
dbj|BAA95607.1| (AB042412) pyruvate:ferredoxin oxidoreductase ga... 108 3e-23
pir||D70400 probable 2-oxoacid--ferredoxin oxidoreductase (EC 1.... 100 1e-20
pir||E70403 probable 2-oxoacid--ferredoxin oxidoreductase (EC 1.... 98 8e-20
gi|11499637 2-ketoisovalerate ferredoxin oxidoreductase, subunit... 85 4e-16
sp|O27114|KORC_METTH 2-OXOGLUTARATE SYNTHASE SUBUNIT KORC (2-KET... 73 2e-12
pir||G71046 probable ferredoxin oxidoreductase gamma subunit - P... 72 5e-12
pir||E75168 2-ketoglutarate ferredoxin oxidoreductase, chain gam... 72 5e-12
pir||D71046 probable ferredoxin oxidoreductase gamma subunit - P... 70 2e-11
sp|Q57956|KORC_METJA 2-OXOGLUTARATE SYNTHASE SUBUNIT KORC (2-KET... 69 2e-11
pir||H75168 2-ketoglutarate ferredoxin oxidoreductase, chain gam... 69 2e-11
pir||D72380 hypothetical protein TM0406 - Thermotoga maritima (s... 68 9e-11
>pir||D75047 keto-valine-ferredoxin oxidoreductase gamma chain PAB1470 -
Pyrococcus abyssi (strain Orsay)
>gi|5458786|emb|CAB50273.1| (AJ248287)
keto-valine-ferredoxin oxidoreductase gamma chain
[Pyrococcus abyssi]
Length = 185
Score = 356 bits (905), Expect = 7e-98
Identities = 185/185 (100%), Positives = 185/185 (100%)
Query: 1 MIEIRFHGRGGQGAVTAANILAEAAFIEGKYVQAFPFFGVERRGAPVTAFTRIDEKPIRI 60
MIEIRFHGRGGQGAVTAANILAEAAFIEGKYVQAFPFFGVERRGAPVTAFTRIDEKPIRI
Sbjct: 1 MIEIRFHGRGGQGAVTAANILAEAAFIEGKYVQAFPFFGVERRGAPVTAFTRIDEKPIRI 60
Query: 61 KTQIYEPDVVVVLDPSLLETVDVTAGLKEDGIVIVNTEKSKEEVLEKLKRKPKKLALVDA 120
KTQIYEPDVVVVLDPSLLETVDVTAGLKEDGIVIVNTEKSKEEVLEKLKRKPKKLALVDA
Sbjct: 61 KTQIYEPDVVVVLDPSLLETVDVTAGLKEDGIVIVNTEKSKEEVLEKLKRKPKKLALVDA 120
Query: 121 TTIALETLGLPITNTAILGAVAKATGLVKIESVETAIKDTFSGELGEKNAKAAREAFEKT 180
TTIALETLGLPITNTAILGAVAKATGLVKIESVETAIKDTFSGELGEKNAKAAREAFEKT
Sbjct: 121 TTIALETLGLPITNTAILGAVAKATGLVKIESVETAIKDTFSGELGEKNAKAAREAFEKT 180
Query: 181 QIFEV 185
QIFEV
Sbjct: 181 QIFEV 185
>sp|O58411|PORC_PYRHO PYRUVATE/KETOISOVALERATE OXIDOREDUCTASES COMMON GAMMA SUBUNIT
[INCLUDES: PYRUVATE SYNTHASE SUBUNIT PORC (PYRUVATE
OXIDOREDUCTASE GAMMA CHAIN) (POR) (PYRUVIC-FERREDOXIN
OXIDOREDUCTASE GAMMA SUBUNIT); KETOISOVALERATE
OXIDOREDUCTASE SUBUNIT VORC (VOR) (2->
>gi|7448910|pir||G71113 probable pyruvate synthase (EC
1.2.7.1) gamma chain - Pyrococcus horikoshii
>gi|3257086|dbj|BAA29769.1| (AP000003) 185aa long
hypothetical ferredoxin oxidoreductase gamma subunit
[Pyrococcus horikoshii]
Length = 185
Score = 345 bits (876), Expect = 2e-94
Identities = 175/185 (94%), Positives = 183/185 (98%)
Query: 1 MIEIRFHGRGGQGAVTAANILAEAAFIEGKYVQAFPFFGVERRGAPVTAFTRIDEKPIRI 60
MIEIRFHGRGGQGAVTAANILAEAAF+EGKYVQAFPFFGVERRGAPVTAFTRIDEKPIRI
Sbjct: 1 MIEIRFHGRGGQGAVTAANILAEAAFLEGKYVQAFPFFGVERRGAPVTAFTRIDEKPIRI 60
Query: 61 KTQIYEPDVVVVLDPSLLETVDVTAGLKEDGIVIVNTEKSKEEVLEKLKRKPKKLALVDA 120
KTQIYEPD+VVVLDPSLLETVDVTAGLKE+GIVI+NTEKSK+E+LEKLK+KPKKLALVDA
Sbjct: 61 KTQIYEPDIVVVLDPSLLETVDVTAGLKEEGIVIINTEKSKDEILEKLKKKPKKLALVDA 120
Query: 121 TTIALETLGLPITNTAILGAVAKATGLVKIESVETAIKDTFSGELGEKNAKAAREAFEKT 180
TTIALETLGLPITNTAILGAVAKATGLV IESVE AIKDTFSGELGEKNAKAAREAFEKT
Sbjct: 121 TTIALETLGLPITNTAILGAVAKATGLVNIESVEKAIKDTFSGELGEKNAKAAREAFEKT 180
Query: 181 QIFEV 185
+IFEV
Sbjct: 181 EIFEV 185
>sp|Q51799|PORC_PYRFU PYRUVATE/KETOISOVALERATE OXIDOREDUCTASES COMMON GAMMA SUBUNIT
[INCLUDES: PYRUVATE SYNTHASE SUBUNIT PORC (PYRUVATE
OXIDOREDUCTASE GAMMA CHAIN) (POR) (PYRUVIC-FERREDOXIN
OXIDOREDUCTASE GAMMA SUBUNIT); KETOISOVALERATE
OXIDOREDUCTASE SUBUNIT VORC (VOR) (2->
>gi|11279655|pir||T45083 pyruvate synthase (EC 1.2.7.1)
gamma chain [imported] - Pyrococcus furiosus
>gi|1197358|emb|CAA59500.1| (X85250) pyruvate ferredoxin
oxidoreductase [Pyrococcus furiosus]
Length = 185
Score = 335 bits (851), Expect = 1e-91
Identities = 168/185 (90%), Positives = 181/185 (97%)
Query: 1 MIEIRFHGRGGQGAVTAANILAEAAFIEGKYVQAFPFFGVERRGAPVTAFTRIDEKPIRI 60
MIE+RFHGRGGQGAVTAANILAEAAF+EGKYVQAFPFFGVERRGAPVTAFTRID KPIRI
Sbjct: 1 MIEVRFHGRGGQGAVTAANILAEAAFLEGKYVQAFPFFGVERRGAPVTAFTRIDNKPIRI 60
Query: 61 KTQIYEPDVVVVLDPSLLETVDVTAGLKEDGIVIVNTEKSKEEVLEKLKRKPKKLALVDA 120
KTQIYEPDVVVVLDPSLL+ VDVTAGLK++GIVIVNTEKSKEEVLEKLK+KPKKLA+VDA
Sbjct: 61 KTQIYEPDVVVVLDPSLLDAVDVTAGLKDEGIVIVNTEKSKEEVLEKLKKKPKKLAIVDA 120
Query: 121 TTIALETLGLPITNTAILGAVAKATGLVKIESVETAIKDTFSGELGEKNAKAAREAFEKT 180
TTIALE LGLPITNTAILGAVAKATGLVKIES+E AIKDTFSGELGEKNA+AAREA+EKT
Sbjct: 121 TTIALEILGLPITNTAILGAVAKATGLVKIESIEEAIKDTFSGELGEKNARAAREAYEKT 180
Query: 181 QIFEV 185
++FE+
Sbjct: 181 EVFEL 185
>sp|Q57717|PORC_METJA PYRUVATE SYNTHASE SUBUNIT PORC (PYRUVATE OXIDOREDUCTASE GAMMA
CHAIN) (POR) (PYRUVIC-FERREDOXIN OXIDOREDUCTASE GAMMA
SUBUNIT) >gi|2127895|pir||F64333 probable pyruvate
synthase (EC 1.2.7.1) gamma chain - Methanococcus
jannaschii >gi|1590996|gb|AAB98256.1| (U67482) pyruvate
ferredoxin oxidoreductase, subunit gamma (porG)
[Methanococcus jannaschii]
Length = 178
Score = 217 bits (546), Expect = 9e-56
Identities = 112/179 (62%), Positives = 137/179 (75%), Gaps = 7/179 (3%)
Query: 1 MIEIRFHGRGGQGAVTAANILAEAAFIEGKYVQAFPFFGVERRGAPVTAFTRIDEKPIRI 60
MIEIRFHGRGGQGAVTAA ILA+AAF +GK+ QAFPFFGVERRGAPV AFTRID+K I +
Sbjct: 1 MIEIRFHGRGGQGAVTAAQILAKAAFYDGKFCQAFPFFGVERRGAPVMAFTRIDDKKITL 60
Query: 61 KTQIYEPDVVVVLDPSLLETVDVTAGLKEDGIVIVNTEKSKEEVLEKLKRKPKKLALVDA 120
+ QIYEPD V+V D +LLE+V+V GLK+DG V++NT K ++ K +DA
Sbjct: 61 RCQIYEPDYVIVQDATLLESVNVVEGLKKDGAVVINTVKDDLDL-------GYKTYTIDA 113
Query: 121 TTIALETLGLPITNTAILGAVAKATGLVKIESVETAIKDTFSGELGEKNAKAAREAFEK 179
T IAL+ LG+PI NTA++GA A TG+V IESV+ AI DTF G+LGEKNAKAA A+ +
Sbjct: 114 TGIALDVLGVPIVNTAMVGAFAGVTGIVSIESVKKAILDTFKGKLGEKNAKAAEVAYNE 172
>pir||G69099 probable pyruvate synthase (EC 1.2.7.1) gamma chain -
Methanobacterium thermoautotrophicum (strain Delta H)
>gi|2622871|gb|AAB86210.1| (AE000929) pyruvate
oxidoreductase, gamma subunit [Methanobacterium
thermoautotrophicum]
Length = 261
Score = 214 bits (540), Expect = 4e-55
Identities = 113/185 (61%), Positives = 140/185 (75%), Gaps = 7/185 (3%)
Query: 1 MIEIRFHGRGGQGAVTAANILAEAAFIEGKYVQAFPFFGVERRGAPVTAFTRIDEKPIRI 60
MIEIRFHGRGGQGAVTAA ILA+AAF +GKY QAFPFFGVERRGAPV AFTRID+ P+R
Sbjct: 1 MIEIRFHGRGGQGAVTAAEILAKAAFEDGKYSQAFPFFGVERRGAPVMAFTRIDDSPVRR 60
Query: 61 KTQIYEPDVVVVLDPSLLETVDVTAGLKEDGIVIVNTEKSKEEVLEKLKRKPKKLALVDA 120
+ Q+Y PD VVVLD L++ VDV +GLK+DG+V++N KS + + K+ +DA
Sbjct: 61 RYQVYNPDYVVVLDEGLVDVVDVFSGLKDDGVVVLN--KSGD-----FQGGDVKVHTIDA 113
Query: 121 TTIALETLGLPITNTAILGAVAKATGLVKIESVETAIKDTFSGELGEKNAKAAREAFEKT 180
T IALETLG PI NT +LGA A TGLV I+S+ IK+TF G++GEKNA+AAR A+E+
Sbjct: 114 TGIALETLGRPIVNTVMLGAFAGVTGLVSIDSLIKIIKETFPGKIGEKNAEAARMAYEEI 173
Query: 181 QIFEV 185
+ V
Sbjct: 174 EKLRV 178
>sp|O27772|PORC_METTH PYRUVATE SYNTHASE SUBUNIT PORC (PYRUVATE OXIDOREDUCTASE GAMMA
CHAIN) (POR) (PYRUVIC-FERREDOXIN OXIDOREDUCTASE GAMMA
SUBUNIT)
Length = 180
Score = 214 bits (540), Expect = 4e-55
Identities = 113/185 (61%), Positives = 140/185 (75%), Gaps = 7/185 (3%)
Query: 1 MIEIRFHGRGGQGAVTAANILAEAAFIEGKYVQAFPFFGVERRGAPVTAFTRIDEKPIRI 60
MIEIRFHGRGGQGAVTAA ILA+AAF +GKY QAFPFFGVERRGAPV AFTRID+ P+R
Sbjct: 1 MIEIRFHGRGGQGAVTAAEILAKAAFEDGKYSQAFPFFGVERRGAPVMAFTRIDDSPVRR 60
Query: 61 KTQIYEPDVVVVLDPSLLETVDVTAGLKEDGIVIVNTEKSKEEVLEKLKRKPKKLALVDA 120
+ Q+Y PD VVVLD L++ VDV +GLK+DG+V++N KS + + K+ +DA
Sbjct: 61 RYQVYNPDYVVVLDEGLVDVVDVFSGLKDDGVVVLN--KSGD-----FQGGDVKVHTIDA 113
Query: 121 TTIALETLGLPITNTAILGAVAKATGLVKIESVETAIKDTFSGELGEKNAKAAREAFEKT 180
T IALETLG PI NT +LGA A TGLV I+S+ IK+TF G++GEKNA+AAR A+E+
Sbjct: 114 TGIALETLGRPIVNTVMLGAFAGVTGLVSIDSLIKIIKETFPGKIGEKNAEAARMAYEEI 173
Query: 181 QIFEV 185
+ V
Sbjct: 174 EKLRV 178
>gb|AAF91262.1|AF230199_4 (AF230199) pyruvate oxidoreductase delta subunit [Methanococcus
maripaludis]
Length = 176
Score = 209 bits (527), Expect = 1e-53
Identities = 104/181 (57%), Positives = 139/181 (76%), Gaps = 7/181 (3%)
Query: 1 MIEIRFHGRGGQGAVTAANILAEAAFIEGKYVQAFPFFGVERRGAPVTAFTRIDEKPIRI 60
M E+RFHGRGGQGAVTAA ILA+AAF +GK+ QAFPFFGVERRGAPV AFTRID++ IR+
Sbjct: 1 MKEVRFHGRGGQGAVTAAQILAKAAFYDGKFCQAFPFFGVERRGAPVMAFTRIDDEKIRL 60
Query: 61 KTQIYEPDVVVVLDPSLLETVDVTAGLKEDGIVIVNTEKSKEEVLEKLKRKPKKLALVDA 120
++QIYEPD V+V DP+L+++VDVT+G+K+ GI+++NT L+ +K + +DA
Sbjct: 61 RSQIYEPDYVIVQDPTLMDSVDVTSGIKDGGIILINT-------LKDIKLNGYDVKTIDA 113
Query: 121 TTIALETLGLPITNTAILGAVAKATGLVKIESVETAIKDTFSGELGEKNAKAAREAFEKT 180
T IAL+ LG+PI NT + GA A TG V IES++ +I +TF G+LG KNA AA +A+ T
Sbjct: 114 TGIALDVLGVPIVNTTLCGAFAGLTGEVTIESLKKSILETFPGKLGPKNADAAEKAYNLT 173
Query: 181 Q 181
+
Sbjct: 174 K 174
>gi|11499289 pyruvate ferredoxin oxidoreductase, subunit gamma (porG)
[Archaeoglobus fulgidus] >gi|7448914|pir||B69462
probable pyruvate synthase (EC 1.2.7.1) gamma chain -
Archaeoglobus fulgidus >gi|2648855|gb|AAB89550.1|
(AE000986) pyruvate ferredoxin oxidoreductase, subunit
gamma (porG) [Archaeoglobus fulgidus]
Length = 191
Score = 187 bits (471), Expect = 5e-47
Identities = 91/179 (50%), Positives = 130/179 (71%), Gaps = 2/179 (1%)
Query: 1 MIEIRFHGRGGQGAVTAANILAEAAFIEGKYVQAFPFFGVERRGAPVTAFTRIDEKPIRI 60
+IE+RFHGRGGQGAVTAA++LA A F EG Y +FP FG E+RG PV +F RI ++PI
Sbjct: 5 LIEVRFHGRGGQGAVTAADLLAVAGFKEGYYTLSFPMFGAEKRGTPVVSFLRISDEPIVA 64
Query: 61 KTQIYEPDVVVVLDPSLLETVDVTAGLKEDGIVIVNTEKSKEEVLEKLKRKPK--KLALV 118
+ ++Y PD VVVLDP+++ETV+V AGLK+ G++I N KS E++ +++K K+A +
Sbjct: 65 RDEVYNPDYVVVLDPTVMETVNVVAGLKKGGMLIANYPKSSEDLKKEVKADELGIKVATI 124
Query: 119 DATTIALETLGLPITNTAILGAVAKATGLVKIESVETAIKDTFSGELGEKNAKAAREAF 177
+AT +A+E LG PITNT ++GA AT L+ +E++ +++ F GEL EKNAK EA+
Sbjct: 125 NATKMAMEVLGRPITNTTMVGAFGGATRLIALETLLEVVREWFKGELAEKNAKLVEEAY 183
>emb|CAC11765.1| (AL445064) probable pyruvate ferredoxin oxidoreductase, gamma
subunit [Thermoplasma acidophilum]
Length = 195
Score = 173 bits (434), Expect = 1e-42
Identities = 95/188 (50%), Positives = 125/188 (65%), Gaps = 10/188 (5%)
Query: 1 MIEIRFHGRGGQGAVTAANILAEAAFIEGKYVQAFPFFGVERRGAPVTAFTRIDEKPIRI 60
M EIRFHGRGGQGAVTA+ ILA AAF EGKYV +FPFFG ERRGAPVTAFTRID+ I +
Sbjct: 9 MYEIRFHGRGGQGAVTASRILAAAAFAEGKYVVSFPFFGTERRGAPVTAFTRIDDSEIYL 68
Query: 61 KTQIYEPDVVVVLDPSLLETVDVTAGLKEDGIVIVNTEKSKEEVLEKLKRKPKKLALVDA 120
K+QIY PD+VVVLD +L T +V GLKE+G VI+N+ + + +A VDA
Sbjct: 69 KSQIYNPDIVVVLDTYVLRTSNVMEGLKENGTVIINSPRDPADF-----NLDANVATVDA 123
Query: 121 TTIA----LETLGLPITNTAILGAVAKATGLVKIESVETAIKDTFSGELGEKNAKAAREA 176
IA L + P+ NT++LGA ++ TG+V +ESV A + ++ E N A +EA
Sbjct: 124 VAIAVKHGLGSRANPVINTSMLGAFSRVTGIVSLESVLEATRQNVPAKVKE-NMDAVKEA 182
Query: 177 FEKTQIFE 184
++ +I +
Sbjct: 183 YDSVKILK 190
>gb|AAK41456.1| Pyruvate synthase gamma chain (Pyruvic-ferredoxin oxidoreductase
gamma chain) (porG-1) [Sulfolobus solfataricus]
Length = 190
Score = 151 bits (377), Expect = 6e-36
Identities = 77/185 (41%), Positives = 116/185 (62%), Gaps = 12/185 (6%)
Query: 1 MIEIRFHGRGGQGAVTAANILAEAAFIEGKYVQAFPFFGVERRGAPVTAFTRIDEKPIRI 60
+IE+ GRGGQG VTA ++ +A +E KY Q+ PFFG ERRGAPV +F R+ +KPI +
Sbjct: 11 LIELALRGRGGQGIVTAGELMTKAMVLEDKYAQSIPFFGGERRGAPVVSFVRLSDKPILL 70
Query: 61 KTQIYEPDVVVVLDPSLLETVDVTAGLKEDGIVIVNTEKSKEEVLEKLKRKPKKLALVDA 120
++Y PD V + D S+++ ++VT GLKE+G +++NT KR K +VDA
Sbjct: 71 HREVYNPDGVAIFDVSMIQLINVTEGLKENGFLLLNTNTP--------KRIWKNEYVVDA 122
Query: 121 TTIALE----TLGLPITNTAILGAVAKATGLVKIESVETAIKDTFSGELGEKNAKAAREA 176
T IA E G I NTA++GA+A+ G + S+E A+K+ F G++GE NA+A
Sbjct: 123 TNIAKELGLIVAGWAIVNTAMIGALARILGQPSLHSLEEAVKEEFPGKIGELNAEAVEIG 182
Query: 177 FEKTQ 181
+++ +
Sbjct: 183 YKEVK 187
>sp|O05650|PORC_THEMA PYRUVATE SYNTHASE SUBUNIT PORC (PYRUVATE OXIDOREDUCTASE GAMMA
CHAIN) (POR) (PYRUVIC-FERREDOXIN OXIDOREDUCTASE GAMMA
SUBUNIT) >gi|7448911|pir||A72427 pyruvate ferredoxin
oxidoreductase, gamma subunit - Thermotoga maritima
(strain MSB8) >gi|4980499|gb|AAD35109.1|AE001690_3
(AE001690) pyruvate ferredoxin oxidoreductase, gamma
subunit [Thermotoga maritima]
Length = 192
Score = 151 bits (377), Expect = 6e-36
Identities = 85/186 (45%), Positives = 121/186 (64%), Gaps = 6/186 (3%)
Query: 3 EIRFHGRGGQGAVTAANILAEAAFIEGKYVQAFPFFGVERRGAPVTAFTRIDEKPIRIKT 62
EIR+HGR GQGA +A+ +LAEAA GKYVQAFP +G ER GAP+ AF RI ++ IR+++
Sbjct: 9 EIRWHGRAGQGAKSASQMLAEAALEAGKYVQAFPEYGAERTGAPMRAFNRIGDEYIRVRS 68
Query: 63 QIYEPDVVVVLDPSLLETVDVTAGLKEDGIVIVNTEKSKEEVLEKLKRKPKKLALVDATT 122
+ PDVVVV+D +LL + GL EDGI++VNT K E V +K K+ +VDAT
Sbjct: 69 AVENPDVVVVIDETLLSPA-IVEGLSEDGILLVNTVKDFEFVRKKTGFN-GKICVVDATD 126
Query: 123 IALETLGLPITNTAILGAVAKATGLVKIESVETAIKDTFS----GELGEKNAKAAREAFE 178
IAL+ + I NT +LGA+ + TG+V +E++E I+ F E+ + N +A R +E
Sbjct: 127 IALQEIKRGIPNTPMLGALVRVTGIVPLEAIEKRIEKMFGKKFPQEVIDANKRALRRGYE 186
Query: 179 KTQIFE 184
+ + E
Sbjct: 187 EVKCSE 192
>emb|CAA59455.1| (X85171) gamma subunit of pyruvate ferredoxin oxidoreductase
[Thermotoga maritima]
Length = 213
Score = 149 bits (373), Expect = 2e-35
Identities = 84/186 (45%), Positives = 120/186 (64%), Gaps = 6/186 (3%)
Query: 3 EIRFHGRGGQGAVTAANILAEAAFIEGKYVQAFPFFGVERRGAPVTAFTRIDEKPIRIKT 62
EIR+HGR GQGA + + +LAEAA GKYVQAFP +G ER GAP+ AF RI ++ IR+++
Sbjct: 30 EIRWHGRAGQGAKSVSQMLAEAALEAGKYVQAFPEYGAERTGAPMRAFNRIGDEYIRVRS 89
Query: 63 QIYEPDVVVVLDPSLLETVDVTAGLKEDGIVIVNTEKSKEEVLEKLKRKPKKLALVDATT 122
+ PDVVVV+D +LL + GL EDGI++VNT K E V +K K+ +VDAT
Sbjct: 90 AVENPDVVVVIDETLLSPA-IVEGLSEDGILLVNTVKDFEFVRKKTGFN-GKICVVDATD 147
Query: 123 IALETLGLPITNTAILGAVAKATGLVKIESVETAIKDTFS----GELGEKNAKAAREAFE 178
IAL+ + I NT +LGA+ + TG+V +E++E I+ F E+ + N +A R +E
Sbjct: 148 IALQEIKRGIPNTPMLGALVRVTGIVPLEAIEKRIEKMFGKKFPQEVIDANKRALRRGYE 207
Query: 179 KTQIFE 184
+ + E
Sbjct: 208 EVKCSE 213
>gb|AAK42869.1| Pyruvate synthase gamma chain (Pyruvic-ferredoxin oxidoreductase
gamma chain) (porG-2) [Sulfolobus solfataricus]
Length = 184
Score = 137 bits (342), Expect = 7e-32
Identities = 72/178 (40%), Positives = 109/178 (60%), Gaps = 5/178 (2%)
Query: 1 MIEIRFHGRGGQGAVTAANILAEAAFIEGKYVQAFPFFGVERRGAPVTAFTRIDEKPIRI 60
M+EIRFHGRGGQG VTA+ +LAEAA E Y +FP +G ERRGA + A+ RI + PIR+
Sbjct: 1 MLEIRFHGRGGQGVVTASQLLAEAAGYENLYTSSFPIYGAERRGAEIEAYCRISDTPIRV 60
Query: 61 KTQIYEPDVVVVLDPSLLE-TVDVTAGLKEDGIVIVNTEKSKEEVLEKLKRKPKKLALVD 119
+ + EPD +VV+D SL++ + + GLK+ +++N+ + K+
Sbjct: 61 TSPVEEPDYLVVIDNSLIQISRSLFRGLKDTSTILLNSPSKPDLRWRTFYVNATKI---- 116
Query: 120 ATTIALETLGLPITNTAILGAVAKATGLVKIESVETAIKDTFSGELGEKNAKAAREAF 177
AT + L G P+ N ILGA+ + G+ K+ S+E AI++ F G++ + N K AR A+
Sbjct: 117 ATDLGLVKSGWPMVNVIILGALIRVMGMPKLSSLEKAIEEEFDGKVAQLNIKGARLAY 174
>pir||F71857 pyruvate ferrodoxin oxidoreductase - Helicobacter pylori (strain
J99) >gi|2460020|gb|AAC02291.1| (AF013980)
pyruvate:ferredoxin oxidoreductase gamma subunit
[Helicobacter pylori] >gi|4155624|gb|AAD06614.1|
(AE001531) Pyruvate ferrodoxin oxidoreductase
[Helicobacter pylori J99]
Length = 186
Score = 131 bits (326), Expect = 5e-30
Identities = 73/186 (39%), Positives = 114/186 (61%), Gaps = 5/186 (2%)
Query: 1 MIEIRFHGRGGQGAVTAANILAEAAFIEGKYVQAFPFFGVERRGAPVTAFTRIDEKPIRI 60
M +IR+H R GQGA+T A LA+ GK VQAF +G +RGA + A+ R+D++PI
Sbjct: 1 MFQIRWHARAGQGAITGAKGLADVISKTGKEVQAFASYGSAKRGAAMMAYNRVDDEPILN 60
Query: 61 KTQIYEPDVVVVLDPSLLETVDVTAGLKEDGIVIVNTEKSKEEVLEKL-KRKPKKLALVD 119
+ +PD V+V+DP L+ ++ A KED I+ + +KEE+ EK + K +K+ LVD
Sbjct: 61 HERFMQPDYVLVIDPGLVFIENIFANEKEDTTYIITSYLNKEELFEKKPELKTRKVFLVD 120
Query: 120 ATTIALETLGLPITNTAILGAVAKATGLVKIESVETAIKDTFSGELGEK----NAKAARE 175
I++ETL PI NT +LGA+ K +G+++IE+ + A K +L ++ N A +
Sbjct: 121 CLKISMETLKRPIPNTPMLGALMKVSGMLEIEAFKEAFKKVLGKKLTQEVIDANMLAIQR 180
Query: 176 AFEKTQ 181
A+E+ Q
Sbjct: 181 AYEEVQ 186
>gb|AAC38204.1| (AF021092) PorC subunit of pyruvate:flavodoxin oxidoreductase
[Helicobacter pylori]
Length = 171
Score = 129 bits (321), Expect = 2e-29
Identities = 71/169 (42%), Positives = 106/169 (62%), Gaps = 5/169 (2%)
Query: 1 MIEIRFHGRGGQGAVTAANILAEAAFIEGKYVQAFPFFGVERRGAPVTAFTRIDEKPIRI 60
M +IR+H R GQGA+T A LA+ GK VQAF +G +RGA + A+ R+D++PI
Sbjct: 1 MFQIRWHARAGQGAITGAKGLADVISKTGKEVQAFASYGSAKRGAAMMAYNRVDDEPILN 60
Query: 61 KTQIYEPDVVVVLDPSLLETVDVTAGLKEDGIVIVNTEKSKEEVLEKL-KRKPKKLALVD 119
+ +PD V+V+DP L+ ++ A KED I+ + +KEE+ EK + K +K+ LVD
Sbjct: 61 HERFMQPDYVLVIDPGLVFIENIFANEKEDTTYIITSYLNKEELFEKKPELKTRKVFLVD 120
Query: 120 ATTIALETLGLPITNTAILGAVAKATGLVKIESVETAIKDTFSGELGEK 168
I++ETL PI NT +LGA+ K +G++ IE A K+ F +LG+K
Sbjct: 121 CLKISMETLKRPIPNTPMLGALMKVSGMLAIE----AFKEAFKKDLGQK 165
>pir||D64658 pyruvate ferredoxin oxidoreductase, gamma subunit - Helicobacter
pylori (strain 26695) >gi|2314259|gb|AAD08152.1|
(AE000617) pyruvate ferredoxin oxidoreductase, gamma
subunit [Helicobacter pylori 26695]
Length = 186
Score = 128 bits (319), Expect = 4e-29
Identities = 72/186 (38%), Positives = 113/186 (60%), Gaps = 5/186 (2%)
Query: 1 MIEIRFHGRGGQGAVTAANILAEAAFIEGKYVQAFPFFGVERRGAPVTAFTRIDEKPIRI 60
M +IR+H R GQGA+T A LA+ GK VQAF +G +RGA + A+ R+D++PI
Sbjct: 1 MFQIRWHARAGQGAITGAKGLADVISKTGKEVQAFASYGSAKRGAAMMAYNRVDDEPILN 60
Query: 61 KTQIYEPDVVVVLDPSLLETVDVTAGLKEDGIVIVNTEKSKEEVLEKL-KRKPKKLALVD 119
+ +PD V+V+DP L+ ++ A KED I+ + +KEE+ EK + K +K+ LVD
Sbjct: 61 HERFMQPDYVLVIDPGLVFIENIFANEKEDTTYIITSYLNKEELFEKKPELKTRKVFLVD 120
Query: 120 ATTIALETLGLPITNTAILGAVAKATGLVKIESVETAIKDTFSGELGEK----NAKAARE 175
I++ETL PI NT +LGA+ K +G+++I + + A K +L ++ N A +
Sbjct: 121 CLKISMETLKRPIPNTPMLGALMKVSGMLEIGAFKEAFKKVLGKKLTQEVIDANMLAIQR 180
Query: 176 AFEKTQ 181
A+E+ Q
Sbjct: 181 AYEEVQ 186
>dbj|BAA95607.1| (AB042412) pyruvate:ferredoxin oxidoreductase gamma subunit
[Hydrogenobacter thermophilus]
Length = 237
Score = 108 bits (268), Expect = 3e-23
Identities = 73/208 (35%), Positives = 112/208 (53%), Gaps = 31/208 (14%)
Query: 2 IEIRFHGRGGQGAVTAANILAEAAFIEGKYVQAFPFFGVERRGAPVTAFTRIDEKPIRIK 61
+ IR GGQGAVTAA+I+A AA EG Y + PFFG E+R AP ++ RI +PI +
Sbjct: 6 VNIRMPALGGQGAVTAAHIIATAADYEGYYAVSNPFFGAEKRMAPAESYARIGIEPIYDR 65
Query: 62 TQIYEPDVVVVLDPSLLE-----TVDVTAGLKEDGIVIVNTEKS--KEEVLEKLKRKPKK 114
++ PDV++V P ++ T+ +G+K++G++I+N+E+ +E E L+ K
Sbjct: 66 GEVVYPDVIMVFHPQVITMGKSYTMPFYSGIKKNGLIIINSEEDLLTDEDKEFLESLNVK 125
Query: 115 LALVDATTIALETLGLPI-TNTAILGAVAKATGLVKIESVETAIKDTF------SG---- 163
+ AT A++ G + TN A++GA+ A G V +E++E IK F SG
Sbjct: 126 VLNFSATKFAIDIAGTELSTNMAMIGALFGAVGCVGLEAIEHGIKSRFLKKFVASGGTAS 185
Query: 164 -------------ELGEKNAKAAREAFE 178
EL EKN A+ A+E
Sbjct: 186 LDSALERKFKKKLELIEKNLSTAKAAYE 213
>pir||D70400 probable 2-oxoacid--ferredoxin oxidoreductase (EC 1.2.7.-) gamma
chain - Aquifex aeolicus >gi|2983631|gb|AAC07199.1|
(AE000727) ferredoxin oxidoreductase gamma subunit
[Aquifex aeolicus]
Length = 230
Score = 100 bits (246), Expect = 1e-20
Identities = 60/171 (35%), Positives = 97/171 (56%), Gaps = 14/171 (8%)
Query: 4 IRFHGRGGQGAVTAANILAEAAFIEGKYVQAFPFFGVERRGAPVTAFTRIDEKPIRIKTQ 63
IR G GGQG VT+A+I+ A GKY PFFG E+R APV A+ R ++PI +
Sbjct: 6 IRIAGVGGQGVVTSAHIIGNAMAAAGKYASLVPFFGSEKRMAPVEAYVRASDQPIYEVGE 65
Query: 64 IYEPDVVVVLDPSLLE-----TVDVTAGLKEDGIVIVNTE-----KSKEEVLEKLKRKPK 113
+ P+V+++ P ++ T+ +GLKE+G++I+N++ +++LE+L
Sbjct: 66 VVYPNVIMIYHPQVITHGKSYTMPFYSGLKENGMIIINSDVDIIPDEDKKILEELN---A 122
Query: 114 KLALVDATTIALETLGLPI-TNTAILGAVAKATGLVKIESVETAIKDTFSG 163
K+ + AT IA + G + TN A++G T LV +E +E A+ + F G
Sbjct: 123 KIYYIPATQIARDIAGTELATNMAMVGTFFGITRLVTLEHIEKALIERFLG 173
>pir||E70403 probable 2-oxoacid--ferredoxin oxidoreductase (EC 1.2.7.-) gamma
chain - Aquifex aeolicus >gi|2983646|gb|AAC07213.1|
(AE000728) ferredoxin oxidoreductase gamma subunit
[Aquifex aeolicus]
Length = 241
Score = 97.5 bits (239), Expect = 8e-20
Identities = 70/208 (33%), Positives = 108/208 (51%), Gaps = 31/208 (14%)
Query: 2 IEIRFHGRGGQGAVTAANILAEAAFIEGKYVQAFPFFGVERRGAPVTAFTRIDEKPIRIK 61
I +R GGQGAV+AA+I+A AA G Y + PF+G E+R AP ++ RI +PI +
Sbjct: 9 INVRMPAIGGQGAVSAAHIMATAADHAGYYAVSNPFYGAEKRMAPSESYVRIGIEPIYDR 68
Query: 62 TQIYEPDVVVVLDPSLLE-----TVDVTAGLKEDGIVIVNTEKS--KEEVLEKLKRKPKK 114
++ PDV++V ++ T+ +G+K++G++I+N E+ +E L+ + K
Sbjct: 69 GEVVYPDVIMVFHSQVITMGKSYTMPFYSGIKKNGLIIINAEEDLLSDEDKAFLEERNVK 128
Query: 115 LALVDATTIALETLGLPI-TNTAILGAVAKATGLVKIESVETAIKDTF------SG---- 163
+ AT A+E G + TN A++GA T +V +ES+E IK F SG
Sbjct: 129 IFNFSATKFAVEIAGTELATNMAMIGAFFGITQIVGMESIEEGIKARFLKKFVASGGTAS 188
Query: 164 -------------ELGEKNAKAAREAFE 178
EL EKN AR A+E
Sbjct: 189 LDSAIERKFKKKLELIEKNIATARAAYE 216
>gi|11499637 2-ketoisovalerate ferredoxin oxidoreductase, subunit gamma (vorG)
[Archaeoglobus fulgidus] >gi|7448909|pir||F69506
probable 2-oxoisovalerate--ferredoxin oxidoreductase (EC
1.2.7.-) gamma chain AF2055 [similarity] - Archaeoglobus
fulgidus >gi|2648475|gb|AAB89195.1| (AE000961)
2-ketoisovalerate ferredoxin oxidoreductase, subunit
gamma (vorG) [Archaeoglobus fulgidus]
Length = 172
Score = 85.4 bits (208), Expect = 4e-16
Identities = 68/184 (36%), Positives = 91/184 (48%), Gaps = 26/184 (14%)
Query: 1 MIEIRFHGRGGQGAVTAANILAEAAFIEGKYVQAFPFFGVERRGAPVTAFTRIDEKPIRI 60
++EI + RGGQG VTAA ILA A ++G Y Q+ P FG ERRGA V AF RI ++ IR
Sbjct: 2 LLEISIYCRGGQGGVTAARILAATAMLQGYYSQSMPQFGPERRGAEVRAFLRISDERIRR 61
Query: 61 KTQIYEPDVVVVLDPSLLETVDVTAGLKEDGIVIVNTEKSKEEVLEKLKRKPKKLALVDA 120
K I PDVV++ D L G E V+VN S + +DA
Sbjct: 62 KCPITYPDVVILFDLKLSFN-----GNPE--TVVVNCNGSS-------FTGHGNVFALDA 107
Query: 121 TTI----ALETLGLPITNTAILGAVAKATGL---VKIESVETAIKDTFSGELGEKNAKAA 173
T I L G PI A+ G AKA L +E++ + G+ +++ KAA
Sbjct: 108 TEITRRYGLVNAGWPILGPAMAGTAAKALDLDPRCLLEAIRLEL-----GDKADRSVKAA 162
Query: 174 REAF 177
EA+
Sbjct: 163 EEAY 166
>sp|O27114|KORC_METTH 2-OXOGLUTARATE SYNTHASE SUBUNIT KORC (2-KETOGLUTARATE
OXIDOREDUCTASE GAMMA CHAIN) (KOR)
(2-OXOGLUTARATE-FERREDOXIN OXIDOREDUCTASE GAMMA SUBUNIT)
>gi|7448903|pir||B69005 probable 2-oxoglutarate synthase
(EC 1.2.7.3) gamma chain - Methanobacterium
thermoautotrophicum (strain Delta H)
>gi|2622138|gb|AAB85531.1| (AE000875) 2-oxoglutarate
oxidoreductase, gamma subunit [Methanobacterium
thermoautotrophicum]
Length = 189
Score = 73.0 bits (176), Expect = 2e-12
Identities = 56/173 (32%), Positives = 86/173 (49%), Gaps = 6/173 (3%)
Query: 3 EIRFHGRGGQGAVTAANILAEAAFI-EGKYVQAFPFFGVERRGAPVTAFTRIDEKPIRIK 61
EIR G GGQG + A +L +AA + +G Y +G E RG A I + I
Sbjct: 7 EIRIAGFGGQGVILAGIVLGKAASLYDGLYAVQTQSYGPEARGGASRAEVVISDHEIDYP 66
Query: 62 TQIYEPDVVVVLDPSLLETVDVTAGLKEDGIVIVNTEKSKE-EVLEKLKRKPKKLALVDA 120
++ PD++V + L T LK G +IV+ + E E+ + ++ + K A
Sbjct: 67 -KVQSPDILVAMSHQALLTY--MDDLKRGGALIVDPDMVVEAEIEDFIRAREVKYFRAPA 123
Query: 121 TTIALETLGLPIT-NTAILGAVAKATGLVKIESVETAIKDTFSGELGEKNAKA 172
T A E +G+ I N ++GA+ +ATG+V + + E AIKD+ EKN A
Sbjct: 124 TRTAEERVGITIVANMVMIGALTEATGIVSVRAAEEAIKDSVPPGTEEKNLMA 176
>pir||G71046 probable ferredoxin oxidoreductase gamma subunit - Pyrococcus
horikoshii >gi|3258092|dbj|BAA30775.1| (AP000006) 170aa
long hypothetical ferredoxin oxidoreductase gamma
subunit [Pyrococcus horikoshii]
Length = 170
Score = 71.8 bits (173), Expect = 5e-12
Identities = 63/178 (35%), Positives = 83/178 (46%), Gaps = 13/178 (7%)
Query: 2 IEIRFHGRGGQGAVTAANILAEAAFIEGKYVQAFPFFGVERRGAPVTAFTRIDEKPIRIK 61
++IRF G GGQG V A IL EAA IEG V + RG A I + I
Sbjct: 1 MQIRFAGIGGQGVVLAGVILGEAAAIEGLRVLQTQDYSSASRGGHSIADVIISDGEI-YD 59
Query: 62 TQIYEPDVVVVLDPSLLETVDVTAGLKEDGIVIVNTEKSKEEVLEKLKRKPKKLALVDAT 121
+ DV+V L ET + LK DG++I++T+ L + + T
Sbjct: 60 LMVTHADVLVALHQLGYET--AKSKLKPDGLLIIDTD---------LVKPDRDFVGAPFT 108
Query: 122 TIALETLGLPIT-NTAILGAVAKATGLVKIESVETAIKDTFSGELGEKNAKAAREAFE 178
IA ET GL +T N LG + TG+VK ESVE AI+ E N +A R+ E
Sbjct: 109 RIAEETTGLALTVNMVALGYLIAKTGIVKPESVEEAIRRRVPKGTEEINLRAFRKGLE 166
>pir||E75168 2-ketoglutarate ferredoxin oxidoreductase, chain gamma (korg-1)
PAB0345 - Pyrococcus abyssi (strain Orsay)
>gi|5457938|emb|CAB49428.1| (AJ248284) 2-ketoglutarate
ferredoxin oxidoreductase, subunit gamma (korG-1)
[Pyrococcus abyssi]
Length = 170
Score = 71.8 bits (173), Expect = 5e-12
Identities = 63/178 (35%), Positives = 84/178 (46%), Gaps = 13/178 (7%)
Query: 2 IEIRFHGRGGQGAVTAANILAEAAFIEGKYVQAFPFFGVERRGAPVTAFTRIDEKPIRIK 61
++IRF G GGQG V A IL EAA IEG V + RG A I + I
Sbjct: 1 MQIRFAGVGGQGVVLAGVILGEAAAIEGLKVLQTQDYSSASRGGHSIADVIISDGEI-YD 59
Query: 62 TQIYEPDVVVVLDPSLLETVDVTAGLKEDGIVIVNTEKSKEEVLEKLKRKPKKLALVDAT 121
+ DV+V L ET + LK +G++I++T+ L + ++ T
Sbjct: 60 LMVTNADVLVALHQLGYET--AKSKLKPEGLLIIDTD---------LVKPDREFVGAPFT 108
Query: 122 TIALETLGLPIT-NTAILGAVAKATGLVKIESVETAIKDTFSGELGEKNAKAAREAFE 178
IA ET GL +T N LG + TG+VK ESVE AI+ E N KA R+ E
Sbjct: 109 RIAEETTGLALTVNMVALGYLIAKTGVVKPESVEEAIRRRVPRGTEEINIKAFRKGLE 166
>pir||D71046 probable ferredoxin oxidoreductase gamma subunit - Pyrococcus
horikoshii >gi|3258089|dbj|BAA30772.1| (AP000006) 185aa
long hypothetical ferredoxin oxidoreductase gamma
subunit [Pyrococcus horikoshii]
Length = 185
Score = 69.9 bits (168), Expect = 2e-11
Identities = 60/180 (33%), Positives = 85/180 (46%), Gaps = 11/180 (6%)
Query: 3 EIRFHGRGGQGAVTAANILAEAAFI-EGKYVQAFPFFGVERRGAPVTAFTRIDEKPIRIK 61
EI G GGQG + A+ IL AA + EG Y +G E RG A I ++PI
Sbjct: 7 EILIGGFGGQGVILASVILGRAAAVYEGFYAVQTQAYGPESRGGASRAEVVISDEPIDYP 66
Query: 62 TQIYEPDVVVVLDPSLLETVDVTAGLKEDGIVIVNTE--KSKEEVLEKLKRKPKKLALVD 119
++ EPD ++L + +K G+VI+ + ++ E LEK +K+
Sbjct: 67 -KVIEPDYAILLSQQAYDKY--LPLVKNGGLVIIEEDLVPNRNEELEK----GRKVYAYP 119
Query: 120 ATTIALETLGLPIT-NTAILGAVAKATGLVKIESVETAIKDTFSGELGEKNAKAAREAFE 178
T IA ET GL +T N LG T +VK ES+E A+ D + N KA + FE
Sbjct: 120 LTEIAEETTGLSLTMNILTLGLFVGLTKIVKKESIEKAVLDAVPKGTEQINLKALYKGFE 179
>sp|Q57956|KORC_METJA 2-OXOGLUTARATE SYNTHASE SUBUNIT KORC (2-KETOGLUTARATE
OXIDOREDUCTASE GAMMA CHAIN) (KOR)
(2-OXOGLUTARATE-FERREDOXIN OXIDOREDUCTASE GAMMA SUBUNIT)
>gi|2127896|pir||H64366 probable 2-oxoglutarate synthase
(EC 1.2.7.3) gamma chain - Methanococcus jannaschii
>gi|1591240|gb|AAB98530.1| (U67503) 2-ketoglutarate
ferredoxin oxidoreductase, subunit gamma (korG)
[Methanococcus jannaschii]
Length = 187
Score = 69.5 bits (167), Expect = 2e-11
Identities = 55/178 (30%), Positives = 87/178 (47%), Gaps = 8/178 (4%)
Query: 3 EIRFHGRGGQGAVTAANILAEAAFI-EGKYVQAFPFFGVERRGAPVTAFTRIDEKPIRIK 61
EIR G GGQG + A IL AA + + K +G E RG + I ++PI
Sbjct: 11 EIRLSGFGGQGIILAGVILGRAAALYDNKEAVQTQSYGPEARGGASKSEVVISDEPIDFP 70
Query: 62 TQIYEPDVVVVLDPSLLETVDVTAGLKEDGIVIVNTEKSKEEVLEKLKRKPKKLALVDAT 121
++ +PD++V L + +KE G+V+V+ + + + ++ K+ T
Sbjct: 71 -KVIKPDILVCLSQQAYDKYK--DDIKEGGVVLVDEDLVSTDKMPEVDVTMYKIPF---T 124
Query: 122 TIALETLGLPIT-NTAILGAVAKATGLVKIESVETAIKDTFSGELGEKNAKAAREAFE 178
IA E + LPI N +LGA+ + T +V ES+E AI D+ EKN A + +E
Sbjct: 125 RIASEEIKLPIVANIVMLGALTRLTNIVSKESMEKAILDSVPKGTEEKNLLAFSKGYE 182
>pir||H75168 2-ketoglutarate ferredoxin oxidoreductase, chain gamma (korg-2)
PAB0348 - Pyrococcus abyssi (strain Orsay)
>gi|5457941|emb|CAB49431.1| (AJ248284) 2-ketoglutarate
ferredoxin oxidoreductase, subunit gamma (korG-2)
[Pyrococcus abyssi]
Length = 185
Score = 69.5 bits (167), Expect = 2e-11
Identities = 58/178 (32%), Positives = 81/178 (44%), Gaps = 7/178 (3%)
Query: 3 EIRFHGRGGQGAVTAANILAEAAFI-EGKYVQAFPFFGVERRGAPVTAFTRIDEKPIRIK 61
EI G GGQG + A+ IL AA + EG Y +G E RG A I ++PI
Sbjct: 7 EILIGGFGGQGVILASVILGRAAAVYEGFYAVQTQAYGPESRGGASRAEVVISDEPIDYP 66
Query: 62 TQIYEPDVVVVLDPSLLETVDVTAGLKEDGIVIVNTEKSKEEVLEKLKRKPKKLALVDAT 121
++ EPD ++L + +K+ G+VIV + K K K + T
Sbjct: 67 -KVIEPDYAILLSQQAYDKY--LPLVKKGGLVIVEEDLVPHR--NKELEKDKSVYAYPLT 121
Query: 122 TIALETLGLPIT-NTAILGAVAKATGLVKIESVETAIKDTFSGELGEKNAKAAREAFE 178
+A ET GL +T N LG T +VK ES+E A+ D + N KA + FE
Sbjct: 122 ELAEETTGLSLTMNILTLGLFVGLTNIVKRESIEKAVLDAVPKGTEQINLKALHKGFE 179
>pir||D72380 hypothetical protein TM0406 - Thermotoga maritima (strain MSB8)
>gi|4980911|gb|AAD35491.1|AE001720_5 (AE001720)
keto/oxoacid ferredoxin oxidoreductase, gamma subunit,
putative [Thermotoga maritima]
Length = 200
Score = 67.5 bits (162), Expect = 9e-11
Identities = 51/172 (29%), Positives = 88/172 (50%), Gaps = 5/172 (2%)
Query: 2 IEIRFHGRGGQGAVTAANILAEAAFIEGKYVQAFPFFGVERRGAPVTAFTRIDEKPIRIK 61
+ IR G GQG + A ILA+A EGK+V + + RG D+ PI
Sbjct: 5 VSIRIAGISGQGNILAGLILAKALVYEGKWVVQTQSYSAQVRGDVSYCDVLYDDSPIDYP 64
Query: 62 TQIYEPDVVVVLDPSLLETVDVTAGLKEDGIVIVNTEKSKEEVLEKLKRKPKKLALVDAT 121
Y D+V +L ++ ++ +K +G+VI++ + + V + +KR +K+ V AT
Sbjct: 65 ESEYF-DIVCILHQKAMD--ELYKSVKVNGVVILD-QTFVKNVPDFVKRITRKILFVPAT 120
Query: 122 TIAL-ETLGLPITNTAILGAVAKATGLVKIESVETAIKDTFSGELGEKNAKA 172
A+ E ++N ++G +AK +VK++S++ A+KD L + N KA
Sbjct: 121 ERAISEFKTAMVSNVIMVGVLAKVCNIVKLDSLKRALKDHVRRPLWDINLKA 172
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.316 0.135 0.359
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 58663030
Number of Sequences: 2977
Number of extensions: 2271149
Number of successful extensions: 8272
Number of sequences better than 1.0e-10: 27
Number of HSP's better than 0.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 8226
Number of HSP's gapped (non-prelim): 28
length of query: 185
length of database: 189,106,746
effective HSP length: 60
effective length of query: 125
effective length of database: 153,197,526
effective search space: 19149690750
effective search space used: 19149690750
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.6 bits)
S2: 162 (67.5 bits)