BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB1471 (vorD) DE:2-KETOVALERATE OXIDOREDUCTASE SUBUNIT VORD
(EC 1.-.-.-) (VOR)
(105 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||C75047 2-ketovalerate oxidoreductase chain vord (EC 1.-.-.-... 231 2e-60
sp|O58412|VORD_PYRHO KETOISOVALERATE OXIDOREDUCTASE SUBUNIT VORD... 221 2e-57
sp|Q51800|VORD_PYRFU KETOISOVALERATE OXIDOREDUCTASE SUBUNIT VORD... 202 9e-52
sp|Q51803|PORD_PYRFU PYRUVATE SYNTHASE SUBUNIT PORD (PYRUVATE OX... 123 8e-28
pir||C71114 probable ferredoxin oxidoreductase delta subunit - P... 121 3e-27
sp|O58415|PORD_PYRHO PYRUVATE SYNTHASE SUBUNIT PORD (PYRUVATE OX... 121 3e-27
pir||H75046 pyruvate synthase (EC 1.2.7.1) delta chain PAB1474 -... 119 1e-26
sp|Q57716|PORD_METJA PYRUVATE SYNTHASE SUBUNIT PORD (PYRUVATE OX... 107 5e-23
gb|AAF91263.1|AF230199_5 (AF230199) pyruvate oxidoreductase gamm... 97 6e-20
gb|AAK42868.1| Pyruvate synthase delta chain (Pyruvic-ferredoxin... 96 2e-19
pir||G69099 probable pyruvate synthase (EC 1.2.7.1) gamma chain ... 95 3e-19
sp|P56815|PORD_METTH PYRUVATE SYNTHASE SUBUNIT PORD (PYRUVATE OX... 94 4e-19
emb|CAC11766.1| (AL445064) pyruvate ferredoxin oxidoreductase, d... 85 2e-16
gb|AAK41455.1| Pyruvate synthase delta chain (Pyruvic-ferredoxin... 85 2e-16
gb|AAD35110.1|AE001690_4 (AE001690) pyruvate ferredoxin oxidored... 83 7e-16
sp|Q56316|PORD_THEMA PYRUVATE SYNTHASE SUBUNIT PORD (PYRUVATE OX... 83 7e-16
gi|11499290 pyruvate ferredoxin oxidoreductase, subunit delta (p... 82 3e-15
gi|11499636 2-ketoisovalerate ferredoxin oxidoreductase, subunit... 80 8e-15
pir||E64658 pyruvate ferredoxin oxidoreductase, delta subunit - ... 73 1e-12
gb|AAK42307.1| Pyruvate synthase delta chain (Pyruvic-ferredoxin... 71 5e-12
pir||S74040 pyruvate synthase delta chain - Sulfolobus solfatari... 71 5e-12
>pir||C75047 2-ketovalerate oxidoreductase chain vord (EC 1.-.-.-) (vor) PAB1471
- Pyrococcus abyssi (strain Orsay)
>gi|5458785|emb|CAB50272.1| (AJ248287) 2-KETOVALERATE
OXIDOREDUCTASE SUBUNIT VORD (EC 1.-.-.-) (VOR)
[Pyrococcus abyssi]
Length = 105
Score = 231 bits (584), Expect = 2e-60
Identities = 105/105 (100%), Positives = 105/105 (100%)
Query: 1 MNTLFGKAKEEARVISPKSVDEYPEAPITLGTTLVNFTGDWRTFMPVIDESKCVKCYICW 60
MNTLFGKAKEEARVISPKSVDEYPEAPITLGTTLVNFTGDWRTFMPVIDESKCVKCYICW
Sbjct: 1 MNTLFGKAKEEARVISPKSVDEYPEAPITLGTTLVNFTGDWRTFMPVIDESKCVKCYICW 60
Query: 61 KFCPEPAIYIKEDGFVAIDYDYCKGCGICANECPTKAITMVREEK 105
KFCPEPAIYIKEDGFVAIDYDYCKGCGICANECPTKAITMVREEK
Sbjct: 61 KFCPEPAIYIKEDGFVAIDYDYCKGCGICANECPTKAITMVREEK 105
>sp|O58412|VORD_PYRHO KETOISOVALERATE OXIDOREDUCTASE SUBUNIT VORD (VOR) (2-OXOISOVALERATE
OXIDOREDUCTASE DELTA CHAIN) (2-OXOISOVALERATE-FERREDOXIN
OXIDOREDUCTASE DELTA SUBUNIT) >gi|7430777|pir||H71113
probable ferredoxin oxidoreductase delta subunit -
Pyrococcus horikoshii >gi|3257087|dbj|BAA29770.1|
(AP000003) 105aa long hypothetical ferredoxin
oxidoreductase delta subunit [Pyrococcus horikoshii]
Length = 105
Score = 221 bits (558), Expect = 2e-57
Identities = 98/105 (93%), Positives = 103/105 (97%)
Query: 1 MNTLFGKAKEEARVISPKSVDEYPEAPITLGTTLVNFTGDWRTFMPVIDESKCVKCYICW 60
MNTLFGKAKEEA+ I+PKSVDEYPEAP++LG TLVNFTGDWRTFMPVIDESKCVKCYICW
Sbjct: 1 MNTLFGKAKEEAKPITPKSVDEYPEAPVSLGITLVNFTGDWRTFMPVIDESKCVKCYICW 60
Query: 61 KFCPEPAIYIKEDGFVAIDYDYCKGCGICANECPTKAITMVREEK 105
K+CPEPAIYIKEDGFVAIDYDYCKGCGICANECPTKAITMVREEK
Sbjct: 61 KYCPEPAIYIKEDGFVAIDYDYCKGCGICANECPTKAITMVREEK 105
>sp|Q51800|VORD_PYRFU KETOISOVALERATE OXIDOREDUCTASE SUBUNIT VORD (VOR) (2-OXOISOVALERATE
OXIDOREDUCTASE DELTA CHAIN) (2-OXOISOVALERATE-FERREDOXIN
OXIDOREDUCTASE DELTA SUBUNIT) >gi|11249861|pir||T45084
pyruvate synthase (EC 1.2.7.1) delta-2 chain [imported]
- Pyrococcus furiosus >gi|1197359|emb|CAA59501.1|
(X85250) 2-ketovalerate ferredoxin oxidoreductase
delta-2 [Pyrococcus furiosus]
Length = 105
Score = 202 bits (509), Expect = 9e-52
Identities = 89/105 (84%), Positives = 97/105 (91%)
Query: 1 MNTLFGKAKEEARVISPKSVDEYPEAPITLGTTLVNFTGDWRTFMPVIDESKCVKCYICW 60
MNTLFGK KEEA+ I KSVDEYPEAPI+LGTTLVN TGDWRTF PV++E KCVKCYICW
Sbjct: 1 MNTLFGKTKEEAKPIVLKSVDEYPEAPISLGTTLVNPTGDWRTFKPVVNEEKCVKCYICW 60
Query: 61 KFCPEPAIYIKEDGFVAIDYDYCKGCGICANECPTKAITMVREEK 105
K+CPEPAIYIK DG+VAIDYDYCKGCGICANECPTKAITM++EEK
Sbjct: 61 KYCPEPAIYIKPDGYVAIDYDYCKGCGICANECPTKAITMIKEEK 105
>sp|Q51803|PORD_PYRFU PYRUVATE SYNTHASE SUBUNIT PORD (PYRUVATE OXIDOREDUCTASE DELTA
CHAIN) (POR) (PYRUVIC-FERREDOXIN OXIDOREDUCTASE DELTA
SUBUNIT) >gi|11249863|pir||T45087 pyruvate synthase (EC
1.2.7.1) delta chain [imported] - Pyrococcus furiosus
>gi|1197362|emb|CAA59504.1| (X85250) pyuvate ferredoxin
oxidoreductase [Pyrococcus furiosus]
Length = 105
Score = 123 bits (305), Expect = 8e-28
Identities = 52/97 (53%), Positives = 69/97 (70%), Gaps = 6/97 (6%)
Query: 9 KEEARVISPKSVDEYPEAPITLGTTLVNFTGDWRTFMPVIDESKCVKCYICWKFCPEPAI 68
KE + ++P ++ P G++++N TG WR F P + KCV+CY+C+ +CPEPAI
Sbjct: 15 KELSEKMTPGAIVYIP------GSSVINKTGSWRVFKPEFNRDKCVRCYLCYIYCPEPAI 68
Query: 69 YIKEDGFVAIDYDYCKGCGICANECPTKAITMVREEK 105
Y+ E+G+ DYDYCKGCGICANECPTKAI MVRE K
Sbjct: 69 YLDEEGYPVFDYDYCKGCGICANECPTKAIEMVREVK 105
>pir||C71114 probable ferredoxin oxidoreductase delta subunit - Pyrococcus
horikoshii >gi|3257090|dbj|BAA29773.1| (AP000003) 108aa
long hypothetical ferredoxin oxidoreductase delta
subunit [Pyrococcus horikoshii]
Length = 108
Score = 121 bits (300), Expect = 3e-27
Identities = 51/97 (52%), Positives = 68/97 (69%), Gaps = 6/97 (6%)
Query: 9 KEEARVISPKSVDEYPEAPITLGTTLVNFTGDWRTFMPVIDESKCVKCYICWKFCPEPAI 68
KE ++P ++ P G++++N TG WR F P + KCV+C++C+ +CPEPAI
Sbjct: 18 KELTEKMTPGAIAYIP------GSSVINKTGSWRVFKPEFHKDKCVRCFLCYIYCPEPAI 71
Query: 69 YIKEDGFVAIDYDYCKGCGICANECPTKAITMVREEK 105
Y+ E+G+ DYDYCKGCGICANECPTKAI MVRE K
Sbjct: 72 YLDEEGYPVFDYDYCKGCGICANECPTKAIEMVREVK 108
>sp|O58415|PORD_PYRHO PYRUVATE SYNTHASE SUBUNIT PORD (PYRUVATE OXIDOREDUCTASE DELTA
CHAIN) (POR) (PYRUVIC-FERREDOXIN OXIDOREDUCTASE DELTA
SUBUNIT)
Length = 105
Score = 121 bits (300), Expect = 3e-27
Identities = 51/97 (52%), Positives = 68/97 (69%), Gaps = 6/97 (6%)
Query: 9 KEEARVISPKSVDEYPEAPITLGTTLVNFTGDWRTFMPVIDESKCVKCYICWKFCPEPAI 68
KE ++P ++ P G++++N TG WR F P + KCV+C++C+ +CPEPAI
Sbjct: 15 KELTEKMTPGAIAYIP------GSSVINKTGSWRVFKPEFHKDKCVRCFLCYIYCPEPAI 68
Query: 69 YIKEDGFVAIDYDYCKGCGICANECPTKAITMVREEK 105
Y+ E+G+ DYDYCKGCGICANECPTKAI MVRE K
Sbjct: 69 YLDEEGYPVFDYDYCKGCGICANECPTKAIEMVREVK 105
>pir||H75046 pyruvate synthase (EC 1.2.7.1) delta chain PAB1474 - Pyrococcus
abyssi (strain Orsay) >gi|5458782|emb|CAB50269.1|
(AJ248287) PYRUVATE SYNTHASE SUBUNIT PORD (EC 1.2.7.1)
(PYRUVATE OXIDOREDUCTASE [Pyrococcus abyssi]
Length = 105
Score = 119 bits (295), Expect = 1e-26
Identities = 50/97 (51%), Positives = 67/97 (68%), Gaps = 6/97 (6%)
Query: 9 KEEARVISPKSVDEYPEAPITLGTTLVNFTGDWRTFMPVIDESKCVKCYICWKFCPEPAI 68
KE ++P ++ P G++++N TG WR F P + KCV+C++C+ +CPEPAI
Sbjct: 15 KELTEKMTPGAIAYIP------GSSVINKTGSWRVFRPEFKKDKCVRCFLCYIYCPEPAI 68
Query: 69 YIKEDGFVAIDYDYCKGCGICANECPTKAITMVREEK 105
Y+ E+G+ DYDYCKGCGICANECPT AI MVRE K
Sbjct: 69 YLDEEGYPVFDYDYCKGCGICANECPTNAIEMVREVK 105
>sp|Q57716|PORD_METJA PYRUVATE SYNTHASE SUBUNIT PORD (PYRUVATE OXIDOREDUCTASE DELTA
CHAIN) (POR) (PYRUVIC-FERREDOXIN OXIDOREDUCTASE DELTA
SUBUNIT) >gi|2127894|pir||E64333 ferredoxin 2[4Fe-4S]
MJ0268 - Methanococcus jannaschii
>gi|1499049|gb|AAB98255.1| (U67482) pyruvate ferredoxin
oxidoreductase, subunit delta (porD) [Methanococcus
jannaschii]
Length = 86
Score = 107 bits (264), Expect = 5e-23
Identities = 47/75 (62%), Positives = 53/75 (70%)
Query: 31 GTTLVNFTGDWRTFMPVIDESKCVKCYICWKFCPEPAIYIKEDGFVAIDYDYCKGCGICA 90
G ++ N TG WRTF P++D KCVKC C+ FCPE AI E+G IDYDYCKGC IC
Sbjct: 12 GNSIKNKTGTWRTFRPILDNEKCVKCENCYIFCPEGAIQEDENGNFKIDYDYCKGCLICM 71
Query: 91 NECPTKAITMVREEK 105
NECP AIT VREEK
Sbjct: 72 NECPVNAITKVREEK 86
>gb|AAF91263.1|AF230199_5 (AF230199) pyruvate oxidoreductase gamma subunit [Methanococcus
maripaludis]
Length = 85
Score = 97.1 bits (238), Expect = 6e-20
Identities = 44/75 (58%), Positives = 51/75 (67%), Gaps = 1/75 (1%)
Query: 31 GTTLVNFTGDWRTFMPVIDESKCVKCYICWKFCPEPAIYIKEDGFVAIDYDYCKGCGICA 90
G++ N TG WR F PV+D+ KCVKC C+ FCPE I ++DG IDYDYCKGC IC
Sbjct: 12 GSSAKNKTGSWRVFKPVLDQDKCVKCENCYIFCPEGCIQ-EKDGKFEIDYDYCKGCLICE 70
Query: 91 NECPTKAITMVREEK 105
ECP KAI REEK
Sbjct: 71 KECPVKAIKAEREEK 85
>gb|AAK42868.1| Pyruvate synthase delta chain (Pyruvic-ferredoxin oxidoreductase
delta chain) (porD-2) [Sulfolobus solfataricus]
Length = 94
Score = 95.6 bits (234), Expect = 2e-19
Identities = 45/93 (48%), Positives = 59/93 (63%), Gaps = 2/93 (2%)
Query: 13 RVISPKSVDEYPEAPITLGTTLVNF-TGDWRTFMPVIDESKCVKCYICWKFCPEPAIYIK 71
+++S S+ EY PIT TG WR PV+D SKC+ C C+ FCPE I +
Sbjct: 3 KLVSSMSLLEYQYFPITRPNKGAGGRTGAWRIVKPVVDYSKCIGCKACFMFCPESTI-VP 61
Query: 72 EDGFVAIDYDYCKGCGICANECPTKAITMVREE 104
+G V +DY+YCKGCG+CAN CP KAI+MV E+
Sbjct: 62 SNGKVRVDYEYCKGCGVCANVCPVKAISMVSEQ 94
>pir||G69099 probable pyruvate synthase (EC 1.2.7.1) gamma chain -
Methanobacterium thermoautotrophicum (strain Delta H)
>gi|2622871|gb|AAB86210.1| (AE000929) pyruvate
oxidoreductase, gamma subunit [Methanobacterium
thermoautotrophicum]
Length = 261
Score = 94.8 bits (232), Expect = 3e-19
Identities = 47/95 (49%), Positives = 60/95 (62%), Gaps = 7/95 (7%)
Query: 10 EEARVISPKSVDEYPEAPITLGTTLVNFTGDWRTFMPVIDESKCVKCYICWKFCPEPAIY 69
E+ RV +S+ + P G+T+ N TG WRTF PV+D+ KC+ C C FCPE I
Sbjct: 174 EKLRVNMMESLGATVKKP---GSTVKNKTGSWRTFKPVLDKDKCIDCDNCILFCPEGCIN 230
Query: 70 IKEDGFVAIDYDYCKGCGICANECPTKAITMVREE 104
+ + IDYDYCKGCGICA +CP KAI M RE+
Sbjct: 231 REHE----IDYDYCKGCGICAEKCPVKAIKMEREK 261
>sp|P56815|PORD_METTH PYRUVATE SYNTHASE SUBUNIT PORD (PYRUVATE OXIDOREDUCTASE DELTA
CHAIN) (POR) (PYRUVIC-FERREDOXIN OXIDOREDUCTASE DELTA
SUBUNIT)
Length = 81
Score = 94.4 bits (231), Expect = 4e-19
Identities = 42/74 (56%), Positives = 51/74 (68%), Gaps = 4/74 (5%)
Query: 31 GTTLVNFTGDWRTFMPVIDESKCVKCYICWKFCPEPAIYIKEDGFVAIDYDYCKGCGICA 90
G+T+ N TG WRTF PV+D+ KC+ C C FCPE I + + IDYDYCKGCGICA
Sbjct: 12 GSTVKNKTGSWRTFKPVLDKDKCIDCDNCILFCPEGCINREHE----IDYDYCKGCGICA 67
Query: 91 NECPTKAITMVREE 104
+CP KAI M RE+
Sbjct: 68 EKCPVKAIKMEREK 81
>emb|CAC11766.1| (AL445064) pyruvate ferredoxin oxidoreductase, delta subunit
related protein [Thermoplasma acidophilum]
Length = 96
Score = 85.4 bits (208), Expect = 2e-16
Identities = 37/86 (43%), Positives = 49/86 (56%), Gaps = 12/86 (13%)
Query: 27 PITLGTTLVNFTGDWRTFMPVIDESKCVKCYICWKFCPEPAIYIKEDG------------ 74
P++ +T + T WR P I KC++C ICWK+CP+ AI I+
Sbjct: 5 PVSTVSTRNHLTDSWRIQRPTIQYDKCIRCMICWKYCPDNAINIENGNKEAPNERIAKME 64
Query: 75 FVAIDYDYCKGCGICANECPTKAITM 100
+ IDY++CKGCGICANECP K I M
Sbjct: 65 YPVIDYNFCKGCGICANECPEKCIDM 90
>gb|AAK41455.1| Pyruvate synthase delta chain (Pyruvic-ferredoxin oxidoreductase
delta chain) (porD-1) [Sulfolobus solfataricus]
Length = 88
Score = 85.0 bits (207), Expect = 2e-16
Identities = 38/68 (55%), Positives = 44/68 (63%)
Query: 38 TGDWRTFMPVIDESKCVKCYICWKFCPEPAIYIKEDGFVAIDYDYCKGCGICANECPTKA 97
TG WR PVI KC KC +C +C E I + E+ + IDYDYCKGCG+CA CP KA
Sbjct: 21 TGLWRVEKPVISYDKCTKCRLCVLYCLENTIDLLENLYPQIDYDYCKGCGVCAQVCPPKA 80
Query: 98 ITMVREEK 105
I MVRE K
Sbjct: 81 IDMVREVK 88
>gb|AAD35110.1|AE001690_4 (AE001690) pyruvate ferredoxin oxidoreductase, delta subunit
[Thermotoga maritima]
Length = 101
Score = 83.5 bits (203), Expect = 7e-16
Identities = 35/71 (49%), Positives = 46/71 (64%), Gaps = 2/71 (2%)
Query: 31 GTTLVNFTGDWRTFMPVIDESKCVKCYICWKFCPEPAIYIKEDGFV-AIDYDYCKGCGIC 89
GT TG WR P++ + KC+ C CW +CP+ AI I+E G + +YDYCKGCG+C
Sbjct: 21 GTAREYKTGAWRVMRPILHKEKCIDCMFCWLYCPDQAI-IQEGGIMKGFNYDYCKGCGLC 79
Query: 90 ANECPTKAITM 100
AN CP +AI M
Sbjct: 80 ANVCPKQAIEM 90
>sp|Q56316|PORD_THEMA PYRUVATE SYNTHASE SUBUNIT PORD (PYRUVATE OXIDOREDUCTASE DELTA
CHAIN) (POR) (PYRUVIC-FERREDOXIN OXIDOREDUCTASE DELTA
SUBUNIT) >gi|7462932|pir||B72427 pyruvate synthase (EC
1.2.7.1) delta chain - Thermotoga maritima (strain MSB8)
>gi|1197392|emb|CAA59456.1| (X85171) delta subunit of
pyruvate ferredoxin oxidoreductase [Thermotoga maritima]
Length = 99
Score = 83.5 bits (203), Expect = 7e-16
Identities = 35/71 (49%), Positives = 46/71 (64%), Gaps = 2/71 (2%)
Query: 31 GTTLVNFTGDWRTFMPVIDESKCVKCYICWKFCPEPAIYIKEDGFV-AIDYDYCKGCGIC 89
GT TG WR P++ + KC+ C CW +CP+ AI I+E G + +YDYCKGCG+C
Sbjct: 19 GTAREYKTGAWRVMRPILHKEKCIDCMFCWLYCPDQAI-IQEGGIMKGFNYDYCKGCGLC 77
Query: 90 ANECPTKAITM 100
AN CP +AI M
Sbjct: 78 ANVCPKQAIEM 88
>gi|11499290 pyruvate ferredoxin oxidoreductase, subunit delta (porD)
[Archaeoglobus fulgidus] >gi|7430792|pir||C69462
pyruvate ferredoxin oxidoreductase, subunit delta (porD)
homolog - Archaeoglobus fulgidus
>gi|2648854|gb|AAB89549.1| (AE000986) pyruvate
ferredoxin oxidoreductase, subunit delta (porD)
[Archaeoglobus fulgidus]
Length = 97
Score = 81.5 bits (198), Expect = 3e-15
Identities = 33/66 (50%), Positives = 45/66 (68%), Gaps = 3/66 (4%)
Query: 38 TGDWRTFMPVIDESKCVKCYICWKFCPEPAIYIKEDG---FVAIDYDYCKGCGICANECP 94
TGDW T PV+D+ KC C C ++CP+ I +KE G + ++Y+YCKGCGICA+ CP
Sbjct: 21 TGDWGTHYPVVDKEKCTACKTCEQYCPDLCIEVKEFGDEKYAVVNYNYCKGCGICASVCP 80
Query: 95 TKAITM 100
+AI M
Sbjct: 81 FEAIKM 86
>gi|11499636 2-ketoisovalerate ferredoxin oxidoreductase, subunit delta (vorD)
[Archaeoglobus fulgidus] >gi|7430791|pir||E69506
probable 2-oxoisovalerate--ferredoxin oxidoreductase (EC
1.2.7.-) delta chain AF2054 [similarity] - Archaeoglobus
fulgidus >gi|2648489|gb|AAB89211.1| (AE000961)
2-ketoisovalerate ferredoxin oxidoreductase, subunit
delta (vorD) [Archaeoglobus fulgidus]
Length = 82
Score = 80.0 bits (194), Expect = 8e-15
Identities = 35/67 (52%), Positives = 41/67 (60%), Gaps = 2/67 (2%)
Query: 38 TGDWRTFMPVIDESKCVKCYICWKFCPEPAIYIKEDGFVAIDYDYCKGCGICANECPTKA 97
TG WR PV+DE KC C C+ +CPE I + D F IDY +CKGCG+C C KA
Sbjct: 18 TGSWRILRPVVDEKKCSGCKECFYYCPEGVIQV--DVFARIDYRFCKGCGVCGEVCRQKA 75
Query: 98 ITMVREE 104
I MV EE
Sbjct: 76 IVMVPEE 82
>pir||E64658 pyruvate ferredoxin oxidoreductase, delta subunit - Helicobacter
pylori >gi|2314260|gb|AAD08153.1| (AE000617) pyruvate
ferredoxin oxidoreductase, delta subunit [Helicobacter
pylori 26695] >gi|2935171|gb|AAC38205.1| (AF021092) PorD
subunit of pyruvate:flavodoxin oxidoreductase
[Helicobacter pylori] >gi|4155625|gb|AAD06615.1|
(AE001531) Pyruvate ferrodoxin oxidoreductase
[Helicobacter pylori J99]
Length = 130
Score = 72.6 bits (175), Expect = 1e-12
Identities = 27/66 (40%), Positives = 41/66 (61%), Gaps = 2/66 (3%)
Query: 41 WRTFMPVIDESKCVKCYICWKFCPEPAIYIKEDGFVAIDYDYCKGCGICANECPT--KAI 98
WR PV + + C+ C+ CW +CP+ AI +E +DY +CKGCG+C + CPT K++
Sbjct: 46 WRVAKPVHNNNICINCFNCWVYCPDAAILSREGKLKGVDYSHCKGCGVCVDVCPTNPKSL 105
Query: 99 TMVREE 104
M E+
Sbjct: 106 WMFEEQ 111
>gb|AAK42307.1| Pyruvate synthase delta chain (Pyruvic-ferredoxin oxidoreductase
delta chain) (porD-like) [Sulfolobus solfataricus]
Length = 363
Score = 70.6 bits (170), Expect = 5e-12
Identities = 29/59 (49%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 46 PVIDESKCVKCYICWKFCPEPAIYIKEDGFVAIDYDYCKGCGICANECPTK-AITMVRE 103
P +D C+KC +CW +CP+ DG+ I YDYC GCGICA CP K I MV E
Sbjct: 263 PTVDFDTCIKCKLCWVYCPDECFDETPDGYYDIAYDYCVGCGICAEVCPVKDCIVMVDE 321
>pir||S74040 pyruvate synthase delta chain - Sulfolobus solfataricus
>gi|1707734|emb|CAA69454.1| (Y08256) orf c01004
[Sulfolobus solfataricus]
Length = 363
Score = 70.6 bits (170), Expect = 5e-12
Identities = 29/59 (49%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 46 PVIDESKCVKCYICWKFCPEPAIYIKEDGFVAIDYDYCKGCGICANECPTK-AITMVRE 103
P +D C+KC +CW +CP+ DG+ I YDYC GCGICA CP K I MV E
Sbjct: 263 PTVDFDTCIKCKLCWVYCPDECFDETPDGYYDIAYDYCVGCGICAEVCPVKDCIVMVDE 321
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.322 0.140 0.461
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 44097635
Number of Sequences: 2977
Number of extensions: 1895749
Number of successful extensions: 6285
Number of sequences better than 1.0e-10: 21
Number of HSP's better than 0.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 6242
Number of HSP's gapped (non-prelim): 24
length of query: 105
length of database: 189,106,746
effective HSP length: 45
effective length of query: 60
effective length of database: 162,174,831
effective search space: 9730489860
effective search space used: 9730489860
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.9 bits)
S2: 160 (66.7 bits)