BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB1473 (vorB) DE:2-KETOVALERATE OXIDOREDUCTASE SUBUNIT VORB
(EC 1.-.-.-) (VOR)
(311 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||A75047 2-ketovalerate oxidoreductase chain vorb (EC 1.-.-.-... 648 0.0
pir||B71114 probable ferredoxin oxidoreductase beta subunit - Py... 630 e-180
sp|O58414|VORB_PYRHO KETOISOVALERATE OXIDOREDUCTASE SUBUNIT VORB... 630 e-180
sp|Q51802|VORB_PYRFU KETOISOVALERATE OXIDOREDUCTASE SUBUNIT VORB... 625 e-178
emb|CAC11768.1| (AL445064) probable 2-ketovalerate ferredoxin ox... 317 8e-86
sp|Q57714|PORB_METJA PYRUVATE SYNTHASE SUBUNIT PORB (PYRUVATE OX... 301 9e-81
gb|AAF91265.1|AF230199_7 (AF230199) pyruvate oxidoreductase beta... 294 1e-78
sp|O27771|PORB_METTH PYRUVATE SYNTHASE SUBUNIT PORB (PYRUVATE OX... 286 2e-76
sp|Q51805|PORB_PYRFU PYRUVATE SYNTHASE SUBUNIT PORB (PYRUVATE OX... 285 5e-76
pir||F71114 probable ferredoxin oxidoreductase beta subunit - Py... 280 1e-74
sp|O58417|PORB_PYRHO PYRUVATE SYNTHASE SUBUNIT PORB (PYRUVATE OX... 280 1e-74
pir||F75046 pyruvate synthase (EC 1.2.7.1) beta chain PAB1476 - ... 277 2e-73
gb|AAK41453.1| Pyruvate synthase beta chain (Pyruvic-ferredoxin ... 267 1e-70
sp|Q56317|PORB_THEMA PYRUVATE SYNTHASE SUBUNIT PORB (PYRUVATE OX... 256 3e-67
gb|AAK42866.1| Pyruvate synthase beta chain (Pyruvic-ferredoxin ... 254 8e-67
gi|11499292 pyruvate ferredoxin oxidoreductase, subunit beta (po... 229 3e-59
gi|11499634 2-ketoisovalerate ferredoxin oxidoreductase, subunit... 210 1e-53
gb|AAK42309.1| Pyruvate synthase beta chain (Pyruvic-ferredoxin ... 208 7e-53
pir||S74042 probable pyruvate synthase (EC 1.2.7.1) beta chain -... 208 7e-53
pir||G64658 probable pyruvate synthase (EC 1.2.7.1) beta chain -... 207 2e-52
gb|AAC38207.1| (AF021092) PorB subunit of pyruvate:flavodoxin ox... 207 2e-52
gb|AAC02294.1| (AF013980) pyruvate:ferredoxin oxidoreductase bet... 206 2e-52
pir||A71858 pyruvate ferrodoxin oxidoreductase - Helicobacter py... 205 8e-52
emb|CAA70873.1| (Y09702) pyruvate-ferredoxin oxidoreductase [Des... 99 6e-20
pdb|1B0P|A Chain A, Crystal Structure Of Pyruvate-Ferredoxin Oxi... 99 6e-20
pir||D70403 ferredoxin oxidoreductase beta subunit - Aquifex aeo... 93 4e-18
dbj|BAA95606.1| (AB042412) pyruvate:ferredoxin oxidoreductase be... 87 3e-16
gb|AAD55754.1|AF132546_1 (AF132546) pyruvate:ferredoxin oxidored... 86 5e-16
sp|Q53046|NIFJ_RHORU PYRUVATE-FLAVODOXIN OXIDOREDUCTASE >gi|6288... 80 3e-14
pir||S70963 pyruvate (flavodoxin) dehydrogenase (EC 1.2.99.-) - ... 79 8e-14
gb|AAB49653.1| (U30149) pyruvate:ferredoxin oxidoreductase [Enta... 79 8e-14
pir||S58236 pyruvate (flavodoxin) dehydrogenase (EC 1.2.99.-) - ... 77 3e-13
dbj|BAB12024.1| (AB021127) pyruvate:NADP+ oxidoreductase [Euglen... 75 9e-13
pir||A71047 probable ferredoxin oxidoreductase beta subunit - Py... 73 4e-12
pir||T43258 pyruvate (flavodoxin) dehydrogenase (EC 1.2.99.-) pf... 70 3e-11
gb|AAC18834.1| (AF064550) putative pyruvate-ferredoxin oxidoredu... 70 4e-11
emb|CAB43933.1| (Y17726) pyruvate ferredoxin oxidoreductase [Clo... 70 4e-11
pir||T43259 pyruvate (flavodoxin) dehydrogenase (EC 1.2.99.-) pf... 69 7e-11
>pir||A75047 2-ketovalerate oxidoreductase chain vorb (EC 1.-.-.-) (vor) PAB1473
- Pyrococcus abyssi (strain Orsay)
>gi|5458783|emb|CAB50270.1| (AJ248287) 2-KETOVALERATE
OXIDOREDUCTASE SUBUNIT VORB (EC 1.-.-.-) (VOR)
[Pyrococcus abyssi]
Length = 311
Score = 648 bits (1653), Expect = 0.0
Identities = 311/311 (100%), Positives = 311/311 (100%)
Query: 1 MEVPEDVKRRLTLPFEENFFAGHTACQGCGASLGLRYVLKAYGRKTILVIPACCSTIIAG 60
MEVPEDVKRRLTLPFEENFFAGHTACQGCGASLGLRYVLKAYGRKTILVIPACCSTIIAG
Sbjct: 1 MEVPEDVKRRLTLPFEENFFAGHTACQGCGASLGLRYVLKAYGRKTILVIPACCSTIIAG 60
Query: 61 PWPYSALNANLFHTAFETTGAVISGIEAALKALGYKVKGEDGIMVVGWAGDGGTADIGLQ 120
PWPYSALNANLFHTAFETTGAVISGIEAALKALGYKVKGEDGIMVVGWAGDGGTADIGLQ
Sbjct: 61 PWPYSALNANLFHTAFETTGAVISGIEAALKALGYKVKGEDGIMVVGWAGDGGTADIGLQ 120
Query: 121 ALSGFLERGHDALYIMYDNEAYMNTGIQRSSSTPYGAWTTNTPGGKRHFLEKRHKKKVID 180
ALSGFLERGHDALYIMYDNEAYMNTGIQRSSSTPYGAWTTNTPGGKRHFLEKRHKKKVID
Sbjct: 121 ALSGFLERGHDALYIMYDNEAYMNTGIQRSSSTPYGAWTTNTPGGKRHFLEKRHKKKVID 180
Query: 181 IVIAHRIPYAATASVAYPEDFLRKLKKAQKIPGPSFIQLFAPCPTGWRAPTDKTIEIARL 240
IVIAHRIPYAATASVAYPEDFLRKLKKAQKIPGPSFIQLFAPCPTGWRAPTDKTIEIARL
Sbjct: 181 IVIAHRIPYAATASVAYPEDFLRKLKKAQKIPGPSFIQLFAPCPTGWRAPTDKTIEIARL 240
Query: 241 AVQTAYFPLFEYENGKYKINMPNPKKEPKPIEEFLKLQGRFKYMTKEDIEVLQKWVLEEW 300
AVQTAYFPLFEYENGKYKINMPNPKKEPKPIEEFLKLQGRFKYMTKEDIEVLQKWVLEEW
Sbjct: 241 AVQTAYFPLFEYENGKYKINMPNPKKEPKPIEEFLKLQGRFKYMTKEDIEVLQKWVLEEW 300
Query: 301 ERLKKLAEVFG 311
ERLKKLAEVFG
Sbjct: 301 ERLKKLAEVFG 311
>pir||B71114 probable ferredoxin oxidoreductase beta subunit - Pyrococcus
horikoshii >gi|3257089|dbj|BAA29772.1| (AP000003) 314aa
long hypothetical ferredoxin oxidoreductase beta subunit
[Pyrococcus horikoshii]
Length = 314
Score = 630 bits (1608), Expect = e-180
Identities = 297/311 (95%), Positives = 307/311 (98%)
Query: 1 MEVPEDVKRRLTLPFEENFFAGHTACQGCGASLGLRYVLKAYGRKTILVIPACCSTIIAG 60
ME+PE+VK+RLT+PFEENFFAGHTACQGCGASLGLRYVLKAYGRKTI+VIPACCSTIIAG
Sbjct: 4 MEIPEEVKKRLTIPFEENFFAGHTACQGCGASLGLRYVLKAYGRKTIVVIPACCSTIIAG 63
Query: 61 PWPYSALNANLFHTAFETTGAVISGIEAALKALGYKVKGEDGIMVVGWAGDGGTADIGLQ 120
PWPYSALNANLFHTAF TTGAVISGIEA LKALGYKVKGEDGIMVVGWAGDGGTADIGLQ
Sbjct: 64 PWPYSALNANLFHTAFATTGAVISGIEAGLKALGYKVKGEDGIMVVGWAGDGGTADIGLQ 123
Query: 121 ALSGFLERGHDALYIMYDNEAYMNTGIQRSSSTPYGAWTTNTPGGKRHFLEKRHKKKVID 180
ALSGF+ERGHDA+YIMYDNEAYMNTGIQRSSSTPYGAWTTNTPGGKRH LEKRHKKKVID
Sbjct: 124 ALSGFIERGHDAVYIMYDNEAYMNTGIQRSSSTPYGAWTTNTPGGKRHLLEKRHKKKVID 183
Query: 181 IVIAHRIPYAATASVAYPEDFLRKLKKAQKIPGPSFIQLFAPCPTGWRAPTDKTIEIARL 240
IVIAHRIPYAATASVAYPEDF+RKLKKAQKIPGPSFIQLFAPCPTGWRAPTDK+IEIARL
Sbjct: 184 IVIAHRIPYAATASVAYPEDFIRKLKKAQKIPGPSFIQLFAPCPTGWRAPTDKSIEIARL 243
Query: 241 AVQTAYFPLFEYENGKYKINMPNPKKEPKPIEEFLKLQGRFKYMTKEDIEVLQKWVLEEW 300
AVQTAYFPLFEYENGKYKINMPNPKKEPKPIEEFLKLQGRFKYMTKED+E LQKWVLEEW
Sbjct: 244 AVQTAYFPLFEYENGKYKINMPNPKKEPKPIEEFLKLQGRFKYMTKEDVEALQKWVLEEW 303
Query: 301 ERLKKLAEVFG 311
ERLKKLAEVFG
Sbjct: 304 ERLKKLAEVFG 314
>sp|O58414|VORB_PYRHO KETOISOVALERATE OXIDOREDUCTASE SUBUNIT VORB (VOR) (2-OXOISOVALERATE
OXIDOREDUCTASE BETA CHAIN) (2-OXOISOVALERATE-FERREDOXIN
OXIDOREDUCTASE BETA SUBUNIT)
Length = 311
Score = 630 bits (1608), Expect = e-180
Identities = 297/311 (95%), Positives = 307/311 (98%)
Query: 1 MEVPEDVKRRLTLPFEENFFAGHTACQGCGASLGLRYVLKAYGRKTILVIPACCSTIIAG 60
ME+PE+VK+RLT+PFEENFFAGHTACQGCGASLGLRYVLKAYGRKTI+VIPACCSTIIAG
Sbjct: 1 MEIPEEVKKRLTIPFEENFFAGHTACQGCGASLGLRYVLKAYGRKTIVVIPACCSTIIAG 60
Query: 61 PWPYSALNANLFHTAFETTGAVISGIEAALKALGYKVKGEDGIMVVGWAGDGGTADIGLQ 120
PWPYSALNANLFHTAF TTGAVISGIEA LKALGYKVKGEDGIMVVGWAGDGGTADIGLQ
Sbjct: 61 PWPYSALNANLFHTAFATTGAVISGIEAGLKALGYKVKGEDGIMVVGWAGDGGTADIGLQ 120
Query: 121 ALSGFLERGHDALYIMYDNEAYMNTGIQRSSSTPYGAWTTNTPGGKRHFLEKRHKKKVID 180
ALSGF+ERGHDA+YIMYDNEAYMNTGIQRSSSTPYGAWTTNTPGGKRH LEKRHKKKVID
Sbjct: 121 ALSGFIERGHDAVYIMYDNEAYMNTGIQRSSSTPYGAWTTNTPGGKRHLLEKRHKKKVID 180
Query: 181 IVIAHRIPYAATASVAYPEDFLRKLKKAQKIPGPSFIQLFAPCPTGWRAPTDKTIEIARL 240
IVIAHRIPYAATASVAYPEDF+RKLKKAQKIPGPSFIQLFAPCPTGWRAPTDK+IEIARL
Sbjct: 181 IVIAHRIPYAATASVAYPEDFIRKLKKAQKIPGPSFIQLFAPCPTGWRAPTDKSIEIARL 240
Query: 241 AVQTAYFPLFEYENGKYKINMPNPKKEPKPIEEFLKLQGRFKYMTKEDIEVLQKWVLEEW 300
AVQTAYFPLFEYENGKYKINMPNPKKEPKPIEEFLKLQGRFKYMTKED+E LQKWVLEEW
Sbjct: 241 AVQTAYFPLFEYENGKYKINMPNPKKEPKPIEEFLKLQGRFKYMTKEDVEALQKWVLEEW 300
Query: 301 ERLKKLAEVFG 311
ERLKKLAEVFG
Sbjct: 301 ERLKKLAEVFG 311
>sp|Q51802|VORB_PYRFU KETOISOVALERATE OXIDOREDUCTASE SUBUNIT VORB (VOR) (2-OXOISOVALERATE
OXIDOREDUCTASE BETA CHAIN) (2-OXOISOVALERATE-FERREDOXIN
OXIDOREDUCTASE BETA SUBUNIT) >gi|11252317|pir||T45086
pyruvate synthase (EC 1.2.7.1) beta chain [imported] -
Pyrococcus furiosus >gi|1197361|emb|CAA59503.1| (X85250)
2-ketovalerate ferredoxin oxidoreductase beta-2
[Pyrococcus furiosus]
Length = 311
Score = 625 bits (1594), Expect = e-178
Identities = 293/311 (94%), Positives = 309/311 (99%)
Query: 1 MEVPEDVKRRLTLPFEENFFAGHTACQGCGASLGLRYVLKAYGRKTILVIPACCSTIIAG 60
MEVPE++K+R+T+PFEE+F+AGHTACQGCGASLGLRYVLKAYG+KTILVIPACCSTIIAG
Sbjct: 1 MEVPENIKKRVTIPFEEHFYAGHTACQGCGASLGLRYVLKAYGKKTILVIPACCSTIIAG 60
Query: 61 PWPYSALNANLFHTAFETTGAVISGIEAALKALGYKVKGEDGIMVVGWAGDGGTADIGLQ 120
PWPYSA++ANLFHTAFETTGAVISGIEAALKA+GYKVKGEDGIMVVGWAGDGGTADIGLQ
Sbjct: 61 PWPYSAIDANLFHTAFETTGAVISGIEAALKAMGYKVKGEDGIMVVGWAGDGGTADIGLQ 120
Query: 121 ALSGFLERGHDALYIMYDNEAYMNTGIQRSSSTPYGAWTTNTPGGKRHFLEKRHKKKVID 180
ALSGFLERGHDA+YIMYDNEAYMNTGIQRSSSTPYGAWTTNTPGG+RHFLEKRHKKKVID
Sbjct: 121 ALSGFLERGHDAVYIMYDNEAYMNTGIQRSSSTPYGAWTTNTPGGRRHFLEKRHKKKVID 180
Query: 181 IVIAHRIPYAATASVAYPEDFLRKLKKAQKIPGPSFIQLFAPCPTGWRAPTDKTIEIARL 240
IVIAHRIPYAATAS+AYPEDF+RKLKKAQKI GPSFIQLFAPCPTGWRAPTDK+IEIARL
Sbjct: 181 IVIAHRIPYAATASIAYPEDFIRKLKKAQKISGPSFIQLFAPCPTGWRAPTDKSIEIARL 240
Query: 241 AVQTAYFPLFEYENGKYKINMPNPKKEPKPIEEFLKLQGRFKYMTKEDIEVLQKWVLEEW 300
AVQTAYFPLFEYENGKYKINMPNPKKEPKPIEEFLKLQGRFKYMTKEDIE LQKWVLEEW
Sbjct: 241 AVQTAYFPLFEYENGKYKINMPNPKKEPKPIEEFLKLQGRFKYMTKEDIETLQKWVLEEW 300
Query: 301 ERLKKLAEVFG 311
ERLKKLAEVFG
Sbjct: 301 ERLKKLAEVFG 311
>emb|CAC11768.1| (AL445064) probable 2-ketovalerate ferredoxin oxidoreductase beta-2
chain [Thermoplasma acidophilum]
Length = 300
Score = 317 bits (805), Expect = 8e-86
Identities = 154/301 (51%), Positives = 210/301 (69%), Gaps = 12/301 (3%)
Query: 12 TLPFEENFFAGHTACQGCGASLGLRYVLKAYGRKTILVIPACCSTIIAGPWPYSALNANL 71
++P EE GHTAC GCGA+L +RYVLKA G KT++ +PA C +I G P+ L+ +
Sbjct: 4 SIPKEELMAPGHTACHGCGATLAMRYVLKALGEKTVVSVPASCWAVIPGAMPFRTLDVPM 63
Query: 72 FHTAFETTGAVISGIEAALKALGYKVKGEDGIMVVGWAGDGGTADIGLQALSGFLERGHD 131
+T F TGA ISG+ G ++G+ VVG+AGDGGTADIGLQ LSG +ERGH+
Sbjct: 64 VYTPFAATGASISGLRE-----GLDIQGKSDYNVVGFAGDGGTADIGLQGLSGAMERGHN 118
Query: 132 ALYIMYDNEAYMNTGIQRSSSTPYGAWTTNTPGGKRHFLEKRHKKKVIDIVIAHRIPYAA 191
YIMYDNE YMNTG+QRS STPYGA TT TP GK +K +KK V D++IA +PY A
Sbjct: 119 VFYIMYDNEGYMNTGVQRSGSTPYGARTTTTPVGKERDFKKENKKIVADMMIAQNVPYVA 178
Query: 192 TASVAYPEDFLRKLKKAQKIPGPSFIQLFAPCPTGWRAPTDKTIEIARLAVQTAYFPLFE 251
TA+VAYPED ++K++ A+ + GP FIQ+ APCPTGW P +KTIEI+RLAVQ+ FPL+E
Sbjct: 179 TATVAYPEDLIKKIEHAKAVHGPKFIQILAPCPTGWYYPPEKTIEISRLAVQSRMFPLYE 238
Query: 252 YENGKYKINMPNPKKEPKPIE--EFLKLQGRFKYMTKEDIEVLQKWVLEEWERLKKLAEV 309
+ G++ +N K KPI+ E++K Q RFK++ + +IE L+++V E W +L + ++
Sbjct: 239 FIEGRFYLN-----KSFKPIDVSEYVKAQDRFKHLNEGEIENLRRYVEERWNQLLEWEKL 293
Query: 310 F 310
+
Sbjct: 294 Y 294
>sp|Q57714|PORB_METJA PYRUVATE SYNTHASE SUBUNIT PORB (PYRUVATE OXIDOREDUCTASE BETA CHAIN)
(POR) (PYRUVIC-FERREDOXIN OXIDOREDUCTASE BETA SUBUNIT)
>gi|2127891|pir||C64333 probable pyruvate synthase (EC
1.2.7.1) beta chain - Methanococcus jannaschii
>gi|1590994|gb|AAB98253.1| (U67482) pyruvate ferredoxin
oxidoreductase, subunit beta (porB) [Methanococcus
jannaschii]
Length = 298
Score = 301 bits (762), Expect = 9e-81
Identities = 154/295 (52%), Positives = 198/295 (66%), Gaps = 4/295 (1%)
Query: 11 LTLPFEENFFAGHTACQGCGASLGLRYVLKAYGRKTILVIPACCSTIIAGPWPYSALNAN 70
+ P EE F GH C GCGA++ R +LK G+ TI+ C ++ P+P ++
Sbjct: 4 MQFPREEYFAPGHRGCAGCGAAIVARLLLKVAGKDTIITNATGCLEVMTTPYPETSWRVP 63
Query: 71 LFHTAFETTGAVISGIEAALKALGYKVK--GEDGIMVVGWAGDGGTADIGLQALSGFLER 128
HTAFE A SGIEAA+KAL K + I V+ GDGGTADIG QALSG +ER
Sbjct: 64 WIHTAFENAAATASGIEAAVKALKRKRGKFADKKINVIAIGGDGGTADIGFQALSGAMER 123
Query: 129 GHDALYIMYDNEAYMNTGIQRSSSTPYGAWTTNTPGGKRHFLEKRHKKKVIDIVIAHRIP 188
GHD LYIMYDNEAYMNTGIQRSSSTP+ A TT +P G + E R KK + I+ AH IP
Sbjct: 124 GHDILYIMYDNEAYMNTGIQRSSSTPFMAATTTSPAGSKIRGEDRPKKDMTMIMAAHGIP 183
Query: 189 YAATASVAYPEDFLRKLKKAQKIPGPSFIQLFAPCPTGWRAPTDKTIEIARLAVQTAYFP 248
Y ATA ++YPEDF+RK+KKA I GP FIQ+ PC TGW P +KTIEI RLAV+T FP
Sbjct: 184 YVATACISYPEDFMRKVKKALSIEGPKFIQVLQPCTTGWGYPPEKTIEIGRLAVETGIFP 243
Query: 249 LFEYENGKYKINMPNPKKEPKPIEEFLKLQGRFKYMTKEDIEVLQKWVLEEWERL 303
L+E ENG+++I K+ KP+ E+LK+Q R++++T EDIE +QK++ E+ + L
Sbjct: 244 LYEIENGEFRITYKPAKR--KPVREYLKMQKRYRHLTDEDIERIQKYIDEKCKLL 296
>gb|AAF91265.1|AF230199_7 (AF230199) pyruvate oxidoreductase beta subunit [Methanococcus
maripaludis]
Length = 298
Score = 294 bits (744), Expect = 1e-78
Identities = 149/285 (52%), Positives = 192/285 (67%), Gaps = 4/285 (1%)
Query: 14 PFEENFFAGHTACQGCGASLGLRYVLKAYGRKTILVIPACCSTIIAGPWPYSALNANLFH 73
P EE F GH C GCGA++ R LKA G+ TI+ C ++ P+P +A H
Sbjct: 7 PREELFAPGHRGCAGCGAAIVARLALKAAGKNTIVANATGCLEVMTTPYPETAWRVPWIH 66
Query: 74 TAFETTGAVISGIEAALKALGYK--VKGEDGIMVVGWAGDGGTADIGLQALSGFLERGHD 131
AFE AV SG+E A+ AL K GE+ + V+ + GDGGTADIG QALSG +ERGHD
Sbjct: 67 VAFENAAAVASGVEGAVAALKRKRGKYGEEKVNVIAFGGDGGTADIGFQALSGAMERGHD 126
Query: 132 ALYIMYDNEAYMNTGIQRSSSTPYGAWTTNTPGGKRHFLEKRHKKKVIDIVIAHRIPYAA 191
+YIMYDNEAYMNTG+QRS STP A TT +P G E KK + I+ AH IPY A
Sbjct: 127 MVYIMYDNEAYMNTGVQRSGSTPLMASTTTSPAGSLIRGETMPKKNMPMIMAAHGIPYVA 186
Query: 192 TASVAYPEDFLRKLKKAQKIPGPSFIQLFAPCPTGWRAPTDKTIEIARLAVQTAYFPLFE 251
TAS++YPEDF+ K+KKA +I GP+FIQ+ PC TGW P DKTIE+ RLAV+T +PLFE
Sbjct: 187 TASISYPEDFMNKVKKACEINGPAFIQVMQPCTTGWGYPADKTIELGRLAVETGVWPLFE 246
Query: 252 YENGKYKINMPNPKKEPKPIEEFLKLQGRFKYMTKEDIEVLQKWV 296
ENG++K+N K+ KPIEE+LK+Q R++++ E+I V+QK +
Sbjct: 247 IENGEFKLNYKPLKR--KPIEEYLKVQKRYRHLNPEEISVIQKTI 289
>sp|O27771|PORB_METTH PYRUVATE SYNTHASE SUBUNIT PORB (PYRUVATE OXIDOREDUCTASE BETA CHAIN)
(POR) (PYRUVIC-FERREDOXIN OXIDOREDUCTASE BETA SUBUNIT)
>gi|7431598|pir||D69099 pyruvate synthase (EC 1.2.7.1)
beta chain - Methanobacterium thermoautotrophicum
(strain Delta H) >gi|2622869|gb|AAB86208.1| (AE000929)
pyruvate oxidoreductase, beta subunit [Methanobacterium
thermoautotrophicum]
Length = 288
Score = 286 bits (725), Expect = 2e-76
Identities = 142/286 (49%), Positives = 192/286 (66%), Gaps = 7/286 (2%)
Query: 11 LTLPFEENFFAGHTACQGCGASLGLRYVLKAYGRKTILVIPACCSTIIAGPWPYSALNAN 70
+ +P EE GH C GCGA++G+R LK G+ T+ V C +I P+P +A
Sbjct: 1 MKIPEEEFLAPGHRGCAGCGATVGVRLALKVLGKNTVAVSSTGCLEVITTPYPETAWRIP 60
Query: 71 LFHTAFETTGAVISGIEAALKALGYKVKGEDGIMVVGWAGDGGTADIGLQALSGFLERGH 130
H AFE AV SG+E ALKA KG D + VV +AGDGGTADIGLQALSG +ERGH
Sbjct: 61 WIHVAFENAAAVASGVERALKA-----KGRDDVNVVAFAGDGGTADIGLQALSGAMERGH 115
Query: 131 DALYIMYDNEAYMNTGIQRSSSTPYGAWTTNTPGGKRHFLEKRHKKKVIDIVIAHRIPYA 190
+ +YI YDNEAYMNTGIQRS+STPYGA TT +P GK F E R KK + I+ AH +PY
Sbjct: 116 NIIYICYDNEAYMNTGIQRSASTPYGASTTTSPHGKESFGEDRPKKNMPLIMAAHGVPYV 175
Query: 191 ATASVAYPEDFLRKLKKAQKIPGPSFIQLFAPCPTGWRAPTDKTIEIARLAVQTAYFPLF 250
ATAS++YPEDF+ K++KA++ GP++I L PC TGW KT+E+ RLAV+T + L+
Sbjct: 176 ATASISYPEDFMEKVRKAKETDGPAYIHLHQPCTTGWGFDPAKTVELGRLAVETGSWILY 235
Query: 251 EYENGKYKINMPNPKKEPKPIEEFLKLQGRFKYMTKEDIEVLQKWV 296
E E+G +++ ++ KP+EE+L Q RF+++T+E +Q++V
Sbjct: 236 EIEDGDFRVTYRPVQR--KPVEEYLNAQKRFRHLTEEQKARIQEYV 279
>sp|Q51805|PORB_PYRFU PYRUVATE SYNTHASE SUBUNIT PORB (PYRUVATE OXIDOREDUCTASE BETA CHAIN)
(POR) (PYRUVIC-FERREDOXIN OXIDOREDUCTASE BETA SUBUNIT)
>gi|11252319|pir||T45089 pyruvate synthase (EC 1.2.7.1)
beta chain [imported] - Pyrococcus furiosus
>gi|1197364|emb|CAA59506.1| (X85250) pyruvate ferredoxin
oxidoreductase beta-2 [Pyrococcus furiosus]
Length = 331
Score = 285 bits (721), Expect = 5e-76
Identities = 163/323 (50%), Positives = 197/323 (60%), Gaps = 34/323 (10%)
Query: 9 RRLTLPFEENFFAGHTACQGCGASLGLRYVLKA--------YGRKTILVIPAC--CSTII 58
R+ + E + GH AC GCG + LR KA YG I C ++
Sbjct: 4 RKPPITTREYWAPGHAACAGCGCATALRLATKALSEAMEEKYGDPNAFAIAHATGCMEVV 63
Query: 59 AGPWPYSALNANLFHTAFETTGAVISGIEAALKALGYKVKGEDGIMVVGWAGDGGTADIG 118
+ +PY+A A H AFE AV SGIEAA K LG K K I+ +G GDGGTADIG
Sbjct: 64 SAVFPYTAWKAPWIHVAFENAAAVASGIEAAWKKLGRKGK----ILAIG--GDGGTADIG 117
Query: 119 LQALSGFLERGHDALYIMYDNEAYMNTGIQRSSSTPYGAWTTNTPGGKRHFLEKRHKKKV 178
LQALSG LER H+ LY+MYDNEAYMNTGIQRSSSTPYGAWTT +P GK E + KK V
Sbjct: 118 LQALSGMLERWHNVLYLMYDNEAYMNTGIQRSSSTPYGAWTTTSPPGKYSVGEDKPKKWV 177
Query: 179 IDIVIAHRIPYAATASVAYPEDFLRKLKKAQKIPGPSFIQLFAPCPTGWRAPTDKTIEIA 238
I AH+IPY ATAS+ P DF+RK+KKA KI GP+F+Q+ CPTGWR+P +K +EIA
Sbjct: 178 ALIAAAHQIPYVATASIGNPLDFVRKIKKAGKIDGPAFVQVLCTCPTGWRSPLEKGVEIA 237
Query: 239 RLAVQTAYFPLFEYENG---KYKINMPNPKKE-------------PKPIEEFLKLQGRFK 282
RLA++T +PLFE ENG KI P + KPIEE+LKLQGRFK
Sbjct: 238 RLAIETGIWPLFEIENGDIWNIKIQPPGGGAKVYKEGNRVVRIEFKKPIEEYLKLQGRFK 297
Query: 283 YMTK--EDIEVLQKWVLEEWERL 303
++ K E IE L+ V W+ L
Sbjct: 298 HLFKRPEAIEELRNQVKAMWKVL 320
>pir||F71114 probable ferredoxin oxidoreductase beta subunit - Pyrococcus
horikoshii >gi|3257093|dbj|BAA29776.1| (AP000003) 334aa
long hypothetical ferredoxin oxidoreductase beta subunit
[Pyrococcus horikoshii]
Length = 334
Score = 280 bits (710), Expect = 1e-74
Identities = 157/323 (48%), Positives = 195/323 (59%), Gaps = 34/323 (10%)
Query: 9 RRLTLPFEENFFAGHTACQGCGASLGLRYVLKA--------YGRKTILVIPAC--CSTII 58
R+ + E + GH AC GCG ++ L+ KA YG I C ++
Sbjct: 7 RKPPITTREYWAPGHAACAGCGCAIALKLATKAFSEAMEEKYGDPNAFAIAQATGCMEVV 66
Query: 59 AGPWPYSALNANLFHTAFETTGAVISGIEAALKALGYKVKGEDGIMVVGWAGDGGTADIG 118
+ +PY+A H AFE A SG+EAA K LG K K I+ +G GDGGTADIG
Sbjct: 67 SAVFPYTAWKVPWIHVAFENAAAAASGVEAAWKKLGIKGK----ILAIG--GDGGTADIG 120
Query: 119 LQALSGFLERGHDALYIMYDNEAYMNTGIQRSSSTPYGAWTTNTPGGKRHFLEKRHKKKV 178
LQALSG LERGH+ +Y+MYDNEAYMNTGIQRSSSTPYGAWTT +P GK E R KK V
Sbjct: 121 LQALSGMLERGHNVVYLMYDNEAYMNTGIQRSSSTPYGAWTTTSPPGKYSIGEDRPKKWV 180
Query: 179 IDIVIAHRIPYAATASVAYPEDFLRKLKKAQKIPGPSFIQLFAPCPTGWRAPTDKTIEIA 238
I AH+IPYAATAS+ P D ++K+KKA K+ GP+FIQ+ CPTGWR P +K +EIA
Sbjct: 181 ALIAAAHQIPYAATASIGNPFDLVKKVKKAAKVDGPAFIQVHCTCPTGWRTPLEKGVEIA 240
Query: 239 RLAVQTAYFPLFEYENG---KYKINMPNPKKE-------------PKPIEEFLKLQGRFK 282
RLA++T +PLFE ENG KI P + KPIEE+LK QGRFK
Sbjct: 241 RLAIETGMWPLFEIENGDIWNIKIQPPGGGAKVYKEGGRVVRIEFKKPIEEYLKYQGRFK 300
Query: 283 YMTK--EDIEVLQKWVLEEWERL 303
++ K E IE L+ + W+ L
Sbjct: 301 HLFKRPEAIEELRNQIKAMWKVL 323
>sp|O58417|PORB_PYRHO PYRUVATE SYNTHASE SUBUNIT PORB (PYRUVATE OXIDOREDUCTASE BETA CHAIN)
(POR) (PYRUVIC-FERREDOXIN OXIDOREDUCTASE BETA SUBUNIT)
Length = 331
Score = 280 bits (710), Expect = 1e-74
Identities = 157/323 (48%), Positives = 195/323 (59%), Gaps = 34/323 (10%)
Query: 9 RRLTLPFEENFFAGHTACQGCGASLGLRYVLKA--------YGRKTILVIPAC--CSTII 58
R+ + E + GH AC GCG ++ L+ KA YG I C ++
Sbjct: 4 RKPPITTREYWAPGHAACAGCGCAIALKLATKAFSEAMEEKYGDPNAFAIAQATGCMEVV 63
Query: 59 AGPWPYSALNANLFHTAFETTGAVISGIEAALKALGYKVKGEDGIMVVGWAGDGGTADIG 118
+ +PY+A H AFE A SG+EAA K LG K K I+ +G GDGGTADIG
Sbjct: 64 SAVFPYTAWKVPWIHVAFENAAAAASGVEAAWKKLGIKGK----ILAIG--GDGGTADIG 117
Query: 119 LQALSGFLERGHDALYIMYDNEAYMNTGIQRSSSTPYGAWTTNTPGGKRHFLEKRHKKKV 178
LQALSG LERGH+ +Y+MYDNEAYMNTGIQRSSSTPYGAWTT +P GK E R KK V
Sbjct: 118 LQALSGMLERGHNVVYLMYDNEAYMNTGIQRSSSTPYGAWTTTSPPGKYSIGEDRPKKWV 177
Query: 179 IDIVIAHRIPYAATASVAYPEDFLRKLKKAQKIPGPSFIQLFAPCPTGWRAPTDKTIEIA 238
I AH+IPYAATAS+ P D ++K+KKA K+ GP+FIQ+ CPTGWR P +K +EIA
Sbjct: 178 ALIAAAHQIPYAATASIGNPFDLVKKVKKAAKVDGPAFIQVHCTCPTGWRTPLEKGVEIA 237
Query: 239 RLAVQTAYFPLFEYENG---KYKINMPNPKKE-------------PKPIEEFLKLQGRFK 282
RLA++T +PLFE ENG KI P + KPIEE+LK QGRFK
Sbjct: 238 RLAIETGMWPLFEIENGDIWNIKIQPPGGGAKVYKEGGRVVRIEFKKPIEEYLKYQGRFK 297
Query: 283 YMTK--EDIEVLQKWVLEEWERL 303
++ K E IE L+ + W+ L
Sbjct: 298 HLFKRPEAIEELRNQIKAMWKVL 320
>pir||F75046 pyruvate synthase (EC 1.2.7.1) beta chain PAB1476 - Pyrococcus
abyssi (strain Orsay) >gi|5458780|emb|CAB50267.1|
(AJ248287) PYRUVATE SYNTHASE SUBUNIT PORB (EC 1.2.7.1)
(PYRUVATE OXIDOREDUCTASE BETA CHAIN) (POR) [Pyrococcus
abyssi]
Length = 334
Score = 277 bits (700), Expect = 2e-73
Identities = 157/323 (48%), Positives = 192/323 (58%), Gaps = 34/323 (10%)
Query: 9 RRLTLPFEENFFAGHTACQGCGASLGLRYVLKA--------YGRKTILVIPAC--CSTII 58
R+ + E + GH AC GCG + LR KA YG I C ++
Sbjct: 7 RKPPITTREYWAPGHAACAGCGCATALRLATKAFSEAMEEKYGDPNAFAIAQATGCMEVV 66
Query: 59 AGPWPYSALNANLFHTAFETTGAVISGIEAALKALGYKVKGEDGIMVVGWAGDGGTADIG 118
+ +PY+A H AFE A SGIEAA K G K K I+ +G GDGGTADIG
Sbjct: 67 SAVFPYTAWKVPWVHVAFENAAAAASGIEAAWKKKGIKGK----ILAIG--GDGGTADIG 120
Query: 119 LQALSGFLERGHDALYIMYDNEAYMNTGIQRSSSTPYGAWTTNTPGGKRHFLEKRHKKKV 178
LQALSG LERGH+ +Y+MYDNEAYMNTGIQRSSSTPYGAWTT +P GK E R KK V
Sbjct: 121 LQALSGMLERGHNVVYLMYDNEAYMNTGIQRSSSTPYGAWTTTSPPGKYSIGEDRPKKWV 180
Query: 179 IDIVIAHRIPYAATASVAYPEDFLRKLKKAQKIPGPSFIQLFAPCPTGWRAPTDKTIEIA 238
I AH IPY ATAS+ P DF++K+KKA K+ GP+F+Q+ CPTGWR P +K IEIA
Sbjct: 181 ALIAAAHMIPYVATASIGNPFDFVKKVKKAAKVDGPAFVQVHCTCPTGWRTPLEKGIEIA 240
Query: 239 RLAVQTAYFPLFEYENG---KYKINMPNPKKE-------------PKPIEEFLKLQGRFK 282
RLA++T +PLFE ENG KI P + KPIEE+LK QGRFK
Sbjct: 241 RLAIETGMWPLFEIENGDIWHIKIQPPGGGAKVYKEGGRVVRIEFKKPIEEYLKYQGRFK 300
Query: 283 YMTK--EDIEVLQKWVLEEWERL 303
++ K E I+ L+ + W+ L
Sbjct: 301 HLFKRPEAIDELRNQIKAMWKVL 323
>gb|AAK41453.1| Pyruvate synthase beta chain (Pyruvic-ferredoxin oxidoreductase
beta chain) (porB-1) [Sulfolobus solfataricus]
Length = 300
Score = 267 bits (676), Expect = 1e-70
Identities = 138/292 (47%), Positives = 186/292 (63%), Gaps = 14/292 (4%)
Query: 19 FFAGHTACQGCGASLGLRYVLKAYGRKTILVIPACCSTIIAGPWPYSALNANLFHTAFET 78
F+ G+ AC GC L L+ G KT+LV+PA C+TII G + H+AF
Sbjct: 16 FYRGNAACPGCPIPKELDVALEVLGNKTVLVVPASCTTIIMGDTNGMPSTVPVVHSAFGA 75
Query: 79 TGAVISGIEAALKALGYKVKGEDGIMVVGWAGDGGTADIGLQALSGFLERGHDALYIMYD 138
A+ SGI +L+ ++G++ +V WAGDG T DIG A+SG ER D LYI YD
Sbjct: 76 AAAIGSGIVRSLR-----MRGDNDAIVAVWAGDGSTGDIGFAAVSGAAERNEDILYICYD 130
Query: 139 NEAYMNTGIQRSSSTPYGAWTTNTPGGKRHFLEKRHKKKVIDIVIAHRIPYAATASVAYP 198
NEAYMNTGIQRS TP GAWTT TP GKR KK + I+ H++PY ATAS+AY
Sbjct: 131 NEAYMNTGIQRSGLTPKGAWTTTTPEGKREV-----KKPLPFIIAEHKVPYVATASIAYI 185
Query: 199 EDFLRKLKKAQKIPGPSFIQLFAPCPTGWRAPTDKTIEIARLAVQTAYFPLFEYENGKYK 258
D+ K++KA++I G +I L +PCP GWR + TI+IA+LAV+T +PLFE ENG++K
Sbjct: 186 YDYEAKMRKAKQIRGFRYIHLLSPCPPGWRFDSKLTIDIAKLAVETGVWPLFEIENGEFK 245
Query: 259 INMPN----PKKEPKPIEEFLKLQGRFKYMTKEDIEVLQKWVLEEWERLKKL 306
+ + KK KP+ E+LKLQGRFK +T+E I+ +Q+ + E WE +K+L
Sbjct: 246 LTSVSKTLVEKKNRKPVAEYLKLQGRFKQLTEEQIKGIQEEIDEMWEEIKRL 297
>sp|Q56317|PORB_THEMA PYRUVATE SYNTHASE SUBUNIT PORB (PYRUVATE OXIDOREDUCTASE BETA CHAIN)
(POR) (PYRUVIC-FERREDOXIN OXIDOREDUCTASE BETA SUBUNIT)
>gi|7431600|pir||D72427 pyruvate synthase (EC 1.2.7.1)
beta chain - Thermotoga maritima (strain MSB8)
>gi|1197393|emb|CAA59458.1| (X85171) beta subunit of
pyruvate ferredoxin oxidoreductase [Thermotoga maritima]
>gi|4980502|gb|AAD35112.1|AE001690_6 (AE001690) pyruvate
ferredoxin oxidoreductase, beta subunit [Thermotoga
maritima]
Length = 324
Score = 256 bits (646), Expect = 3e-67
Identities = 134/298 (44%), Positives = 187/298 (61%), Gaps = 12/298 (4%)
Query: 22 GHTACQGCGASLGLRYVL---KAYGRKTILVIPACCSTIIAGPWPYSALNANLFHTAFET 78
GH C GCGA + +++V+ + G + ++ + C + +PY+A + H AFE
Sbjct: 22 GHRLCPGCGAPITVKFVMMIARHLGYEPVVGLATGCLEVSTSIYPYTAWSVPYIHNAFEN 81
Query: 79 TGAVISGIEAALKALGYKVK--GEDGIMVVGWAGDGGTADIGLQALSGFLERGHDALYIM 136
A +SG+E A KAL K K + + + GDGGT DIGLQ+LSG LERGH LY++
Sbjct: 82 VAATMSGVETAYKALKNKGKIPEDKKYAFIAFGGDGGTYDIGLQSLSGMLERGHKVLYVL 141
Query: 137 YDNEAYMNTGIQRSSSTPYGAWTTNTPGGKRHFLEKRHKKKVIDIVIAHRIPYAATASVA 196
YDNE YMNTG QRS STP G+ TT P GK+ + + KK +++IV AH YAATAS++
Sbjct: 142 YDNEGYMNTGNQRSGSTPPGSDTTTAPVGKKLPGKVQLKKNIVEIVAAHENVYAATASLS 201
Query: 197 YPEDFLRKLKKAQKIPGPSFIQLFAPCPTGWRAPTDKTIEIARLAVQTAYFPLFEYENGK 256
P DF K++KA GPSF+ +F+PC WR DKT+EI++LAV+T Y+PL+E E G
Sbjct: 202 EPMDFFAKVEKALNFDGPSFLAVFSPCVRFWRVNDDKTVEISKLAVETKYWPLYEVERGV 261
Query: 257 YKINMPNPKKEPKPIEEFLKLQGRFKYM-----TKEDIEVLQKWVLEEWERLKKLAEV 309
Y++ ++ KP+EEFLK QGRF+ + KE ++ LQ++V WERL L EV
Sbjct: 262 YRVT--RKPRQFKPVEEFLKAQGRFRKLLSRPDAKEIVDELQEYVDRRWERLLTLEEV 317
>gb|AAK42866.1| Pyruvate synthase beta chain (Pyruvic-ferredoxin oxidoreductase
beta chain) (porB-2) [Sulfolobus solfataricus]
Length = 299
Score = 254 bits (643), Expect = 8e-67
Identities = 129/290 (44%), Positives = 187/290 (64%), Gaps = 15/290 (5%)
Query: 21 AGHTACQGCGASLGLRYVLKAYGRKTILVIPACCSTIIAGPWPYSALNANLFHTAFETTG 80
+G +AC GC ++ +R + G+ +LV+ A CS++I G PY+A N + AF
Sbjct: 17 SGTSACPGCPENMAMRMLGMGLGKDVVLVVVAGCSSVIQGNAPYNAYNFPTVNVAFAAGP 76
Query: 81 AVISGIEAALKALGYKVKGEDGIMVVGWAGDGGTADIGLQALSGFLERGHDALYIMYDNE 140
A +G+ A YK KG++ + +V WAGDGG+ADIG +LSG ER + LY+ DNE
Sbjct: 77 ATAAGLARA-----YKQKGKN-VTIVVWAGDGGSADIGFASLSGAAERNDNILYLTVDNE 130
Query: 141 AYMNTGIQRSSSTPYGAWTTNTPGGKRHFLEKRHKKKVIDIVIAHRIPYAATASVAYPED 200
AYMN+G QRS STP+GA TT TP GK K +KK + ++IAH +PY ATASV YP D
Sbjct: 131 AYMNSGGQRSGSTPFGAITTTTPEGK-----KENKKNLPLLMIAHNVPYVATASVGYPHD 185
Query: 201 FLRKLKKAQKIPGPSFIQLFAPCPTGWRAPTDKTIEIARLAVQTAYFPLFEYENGKYKIN 260
++ KLKKA+++ G ++ + P P GW KT+E+A+LAVQT Y+PLFEY NGK I+
Sbjct: 186 YIEKLKKARQVEGFRYVHVLTPDPYGWLFDPSKTVEVAKLAVQTCYWPLFEYYNGKLNIS 245
Query: 261 MPN----PKKEPKPIEEFLKLQGRFKYMTKEDIEVLQKWVLEEWERLKKL 306
+ ++ +PI +FL +QGRFK +T E I++L++++ WE+LK +
Sbjct: 246 SESLHCLDRRTRRPIRDFLSIQGRFKKLTDEQIKILEQYIDNLWEKLKSM 295
>gi|11499292 pyruvate ferredoxin oxidoreductase, subunit beta (porB)
[Archaeoglobus fulgidus] >gi|7431599|pir||E69462
probable pyruvate synthase (EC 1.2.7.1) beta chain -
Archaeoglobus fulgidus >gi|2648852|gb|AAB89547.1|
(AE000986) pyruvate ferredoxin oxidoreductase, subunit
beta (porB) [Archaeoglobus fulgidus]
Length = 294
Score = 229 bits (578), Expect = 3e-59
Identities = 130/289 (44%), Positives = 170/289 (57%), Gaps = 11/289 (3%)
Query: 19 FFAGHTACQGCGASLGLRYVLKAYGRKTILVIPACCSTIIAGPWPYSALNANLFHTAFET 78
F +GH AC GCG + ++ VL K V C II+ + +A N H+ FE
Sbjct: 4 FGSGHGACPGCGLPIAVKTVLNLLDGKVFAVNSTGCLEIISSQYGKNAWNVPYIHSLFEN 63
Query: 79 TGAVISGIEAALKALGYKVKGEDGIMVVGWAGDGGTADIGLQALSGFLERGHDALYIMYD 138
AV +G+EAAL+AL K +G VV +AGDG TADIG+ LSG +R HD LYI D
Sbjct: 64 AAAVAAGVEAALRALKRKDEGH----VVVFAGDGATADIGIGTLSGAFDRNHDILYICLD 119
Query: 139 NEAYMNTGIQRSSSTPYGAWTTNTPGGKRHFLEKRHKKKVIDIVIAHRIPYAATASVAYP 198
NEAY NTG Q+S TP G TT TP GK + KK +I I +AH IPY A++SV Y
Sbjct: 120 NEAYQNTGHQQSGLTPPGESTTTTPAGKVLPGKVGRKKDMISIAVAHGIPYVASSSVGYV 179
Query: 199 EDFLRKLKKAQKIPGPSFIQLFAPCPTGWRAPTDKTIEIARLAVQTAYFPLFEYENGKYK 258
D RK+KKA K G +IQ+ +PC TGW I++ARLAV+T +PL E+E G K
Sbjct: 180 SDIRRKVKKAVKFEGAKYIQIHSPCVTGWGIDGSIAIKVARLAVETGLYPLVEFEYG--K 237
Query: 259 INMPNPKKEPKPIEEFLKLQGRFKYM-----TKEDIEVLQKWVLEEWER 302
+ K+ KP+EE+LKLQ RF+++ +E IE LQ++ E ER
Sbjct: 238 LTSVRKIKDRKPVEEYLKLQRRFRHLFTHEKGREMIETLQRFADENAER 286
>gi|11499634 2-ketoisovalerate ferredoxin oxidoreductase, subunit beta (vorB)
[Archaeoglobus fulgidus] >gi|7431603|pir||C69506
probable 2-oxoisovalerate--ferredoxin oxidoreductase (EC
1.2.7.-) beta chain AF2052 [similarity] - Archaeoglobus
fulgidus >gi|2648477|gb|AAB89197.1| (AE000961)
2-ketoisovalerate ferredoxin oxidoreductase, subunit
beta (vorB) [Archaeoglobus fulgidus]
Length = 278
Score = 210 bits (530), Expect = 1e-53
Identities = 122/290 (42%), Positives = 174/290 (59%), Gaps = 20/290 (6%)
Query: 22 GHTACQGCGASLGLRYVLKAYGRKTILVIPACCSTIIAGPWPYSALNANLFHTAFETTGA 81
G+ +CQGC S+ +R + + +LVIPA CST+IAG P SA+ + H F +T +
Sbjct: 5 GNASCQGCPISMAMRCLDEI--ENPVLVIPAGCSTVIAGLHPKSAMKCPVVHVPFASTHS 62
Query: 82 VISGIEAALKALGYKVKGEDGIMVVGWAGDGGTADIGLQALSGFLERGHDALYIMYDNEA 141
V G+ A K LG G VV W GDG ADIG ALS R D L ++ DNEA
Sbjct: 63 VACGLSEAYKKLGV------GATVVAWMGDGA-ADIGFAALSASATRKDDILTVVVDNEA 115
Query: 142 YMNTGIQRSSSTPYGAWTTNTPGGKRHFLEKRHKKKVIDIVIAHRIPYAATASVAYPEDF 201
YMNTG Q S ST + A TT +P GK ++ + +++AH++ Y ATASV Y D
Sbjct: 116 YMNTGTQSSLSTFWKAKTTTSPKGKTE-----DRRNLALVMLAHKVDYVATASVGYIHDL 170
Query: 202 LRKLKKAQKIPGPSFIQLFAPCPTGWRAPTDKTIEIARLAVQTAYFPLFEYENGKYKINM 261
RK + A K G F+ + APCP GWR P++KT+E+AR AV + + L+EY+ GK ++
Sbjct: 171 RRKFRIAGKKDGFRFLHVHAPCPPGWRFPSEKTVEVARKAVMSGAWILWEYD-GKLTLSP 229
Query: 262 PNPK----KEPKPIEEFLKLQGRFKYMTKEDIEVLQKWVLEEWERLKKLA 307
P+ K E P+EE+L QGRF+++++EDIE +++ + EEW+ L K +
Sbjct: 230 PSRKYADGSERIPLEEYLS-QGRFQHLSREDIEEIERRIEEEWKLLLKFS 278
>gb|AAK42309.1| Pyruvate synthase beta chain (Pyruvic-ferredoxin oxidoreductase
beta chain) (porB-like) [Sulfolobus solfataricus]
Length = 338
Score = 208 bits (524), Expect = 7e-53
Identities = 120/300 (40%), Positives = 179/300 (59%), Gaps = 12/300 (4%)
Query: 14 PFEENFFAGHTACQGCGASLGLRYVLKAYGRKTILVIPACCSTIIAGPWPYSALNANLFH 73
P EE + +GH CQGC ++L +R++ KA G +TI++ C + + ++ H
Sbjct: 22 PLEEFYTSGHRTCQGCESALVMRFLAKAAGPRTIVIGATGCMYVANTTYYTTSWIVPWVH 81
Query: 74 TAFETTGAVISGIEAALKALGYKVK-GEDGIMVVGWAGDGGTADIGLQALSGFLERGHDA 132
T TGA G AAL+AL K K ++ I V+ + GD G AD+GL +S + ++
Sbjct: 82 TQLGGTGAAALGTAAALRALMRKGKIKQEPINVIAFCGDLGCADMGLSGVSNAMTYDYNL 141
Query: 133 LYIMYDNEAYMNTGIQRSSSTPYGAWTT-NTPGGKRHFLEKRHKKKVIDIVIA-HR-IPY 189
L I+YDNE+ NT IQ +S TP+GA T+ + PG +R ++KR KK V+ ++IA HR + Y
Sbjct: 142 LIILYDNESSANTDIQETSMTPFGAQTSFSRPGKQRRIMKKRWKKSVVPMIIAGHRNVRY 201
Query: 190 AATASVAYPEDFLRKLKKAQKIPGPSFIQLFAPCPTGWRAPTDKTIEIARLAVQTAYFPL 249
AAT + AYP D + K++KA I GP+FI PCP GW + E+ LAV+T +PL
Sbjct: 202 AATMTPAYPLDSMNKIRKALTIGGPTFIHSLDPCPKGWDYDPKFSHELGVLAVETGLWPL 261
Query: 250 FEYENGKYKINMPNP-----KKEPKPIEEFLKLQGRFKYMTKEDIEVLQKWV---LEEWE 301
+EY +G+ N P + + KP++E+L+ QGRF + T+EDIE +Q+ V EEWE
Sbjct: 262 YEYIDGEIVYNEPTKSIVEGRMKRKPVKEYLEKQGRFSHFTEEDIEYVQRMVDEMYEEWE 321
>pir||S74042 probable pyruvate synthase (EC 1.2.7.1) beta chain - Sulfolobus
solfataricus >gi|1707736|emb|CAA69456.1| (Y08256)
pyruvate-ferredoxin oxidoreductase beta-2 [Sulfolobus
solfataricus]
Length = 338
Score = 208 bits (524), Expect = 7e-53
Identities = 120/300 (40%), Positives = 179/300 (59%), Gaps = 12/300 (4%)
Query: 14 PFEENFFAGHTACQGCGASLGLRYVLKAYGRKTILVIPACCSTIIAGPWPYSALNANLFH 73
P EE + +GH CQGC ++L +R++ KA G +TI++ C + + ++ H
Sbjct: 22 PLEEFYTSGHRTCQGCESALVMRFLAKAAGPRTIVIGATGCMYVANTTYYTTSWIVPWVH 81
Query: 74 TAFETTGAVISGIEAALKALGYKVK-GEDGIMVVGWAGDGGTADIGLQALSGFLERGHDA 132
T TGA G AAL+AL K K ++ I V+ + GD G AD+GL +S + ++
Sbjct: 82 TQLGGTGAAALGTAAALRALMRKGKIKQEPINVIAFCGDLGCADMGLSGVSNAMTYDYNL 141
Query: 133 LYIMYDNEAYMNTGIQRSSSTPYGAWTT-NTPGGKRHFLEKRHKKKVIDIVIA-HR-IPY 189
L I+YDNE+ NT IQ +S TP+GA T+ + PG +R ++KR KK V+ ++IA HR + Y
Sbjct: 142 LIILYDNESSANTDIQETSMTPFGAQTSFSRPGKQRRIMKKRWKKSVVPMIIAGHRNVRY 201
Query: 190 AATASVAYPEDFLRKLKKAQKIPGPSFIQLFAPCPTGWRAPTDKTIEIARLAVQTAYFPL 249
AAT + AYP D + K++KA I GP+FI PCP GW + E+ LAV+T +PL
Sbjct: 202 AATMTPAYPLDSMNKIRKALTIGGPTFIHSLDPCPKGWDYDPKFSHELGVLAVETGLWPL 261
Query: 250 FEYENGKYKINMPNP-----KKEPKPIEEFLKLQGRFKYMTKEDIEVLQKWV---LEEWE 301
+EY +G+ N P + + KP++E+L+ QGRF + T+EDIE +Q+ V EEWE
Sbjct: 262 YEYIDGEIVYNEPTKSIVEGRMKRKPVKEYLEKQGRFSHFTEEDIEYVQRMVDEMYEEWE 321
>pir||G64658 probable pyruvate synthase (EC 1.2.7.1) beta chain - Helicobacter
pylori (strain 26695) >gi|2314262|gb|AAD08155.1|
(AE000617) pyruvate ferredoxin oxidoreductase, beta
subunit [Helicobacter pylori 26695]
Length = 314
Score = 207 bits (521), Expect = 2e-52
Identities = 117/297 (39%), Positives = 166/297 (55%), Gaps = 6/297 (2%)
Query: 17 ENFFAGHTACQGCGASLGLRYVLKAYGRKTILVIPACCSTIIAGPWPYSALNANLFHTAF 76
E F H C GCG + +R VL A +L C + + +P+++ + H F
Sbjct: 16 EKFQGSHLLCPGCGHGIIVREVLNAVDGPIVLGNSTGCLEVCSAVYPHTSWDVPWIHIGF 75
Query: 77 ETTGAVISGIEAALKALGYKVKGE-DGIMVVGWAGDGGTADIGLQALSGFLERGHDALYI 135
E ISG+EA KAL K + + V + GDG + DIGLQ +SG +ERGHD YI
Sbjct: 76 ENGSTAISGVEAMYKALTNKGRYQGQKPKFVAFGGDGASYDIGLQFISGCMERGHDMTYI 135
Query: 136 MYDNEAYMNTGIQRSSSTPYGAWTTNTPGGKRHFLEKRHKKKVIDIVIAHRIPYAATASV 195
DNE Y NTG QRS STP GA T+ TP G F +K KK +++I+ +H +PY A S
Sbjct: 136 CLDNENYANTGGQRSGSTPLGASTSTTPAGSVSFGKKEKKKDIVNIMASHGVPYVAQLSP 195
Query: 196 AYPEDFLRKLKKAQKIPGPSFIQLFAPCPTGWRAPTDKTIEIARLAVQTAYFPLFEYENG 255
+D +K+K A GP FI +PC T W+ ++KTIE+A +AV + FPLFE NG
Sbjct: 196 NKWKDMNKKIKTALDTEGPCFINALSPCTTEWKFESNKTIELADMAVDSLMFPLFEIFNG 255
Query: 256 KYKINMPNPKKEPKPIEEFLKLQGRFKYMTKED----IEVLQKWVLEEWERLKKLAE 308
+ ++ + + P+ ++L Q RFK++ K++ IE LQK V E WE L++ E
Sbjct: 256 R-ELKITYRPRNIIPVRDYLGAQKRFKHLFKKENEHIIEELQKDVNERWEYLQRREE 311
>gb|AAC38207.1| (AF021092) PorB subunit of pyruvate:flavodoxin oxidoreductase
[Helicobacter pylori]
Length = 328
Score = 207 bits (521), Expect = 2e-52
Identities = 117/297 (39%), Positives = 166/297 (55%), Gaps = 6/297 (2%)
Query: 17 ENFFAGHTACQGCGASLGLRYVLKAYGRKTILVIPACCSTIIAGPWPYSALNANLFHTAF 76
E F H C GCG + +R VL A +L C + + +P+++ + H F
Sbjct: 16 EKFQGSHLLCPGCGHGIIVREVLNAVDGPIVLGNSTGCLEVCSAVYPHTSWDVPWIHIGF 75
Query: 77 ETTGAVISGIEAALKALGYKVKGE-DGIMVVGWAGDGGTADIGLQALSGFLERGHDALYI 135
E ISG+EA KAL K + + V + GDG + DIGLQ +SG +ERGHD YI
Sbjct: 76 ENGSTAISGVEAMYKALTNKGRYQGQKPKFVAFGGDGASYDIGLQFISGCMERGHDMTYI 135
Query: 136 MYDNEAYMNTGIQRSSSTPYGAWTTNTPGGKRHFLEKRHKKKVIDIVIAHRIPYAATASV 195
DNE Y NTG QRS STP GA T+ TP G F +K KK +++I+ +H +PY A S
Sbjct: 136 CLDNENYANTGGQRSGSTPLGASTSTTPAGSVSFGKKEKKKDIVNIMASHGVPYVAQLSP 195
Query: 196 AYPEDFLRKLKKAQKIPGPSFIQLFAPCPTGWRAPTDKTIEIARLAVQTAYFPLFEYENG 255
+D +K+K A GP FI +PC T W+ ++KTIE+A +AV + FPLFE NG
Sbjct: 196 NKWKDMNKKIKTALDTEGPCFINALSPCTTEWKFESNKTIELADMAVDSLMFPLFEIFNG 255
Query: 256 KYKINMPNPKKEPKPIEEFLKLQGRFKYMTKED----IEVLQKWVLEEWERLKKLAE 308
+ ++ + + P+ ++L Q RFK++ K++ IE LQK V E WE L++ E
Sbjct: 256 R-ELKITYRPRNIIPVRDYLGAQKRFKHLFKKENEHIIEELQKDVNERWEYLQRREE 311
>gb|AAC02294.1| (AF013980) pyruvate:ferredoxin oxidoreductase beta subunit
[Helicobacter pylori]
Length = 314
Score = 206 bits (520), Expect = 2e-52
Identities = 117/297 (39%), Positives = 166/297 (55%), Gaps = 6/297 (2%)
Query: 17 ENFFAGHTACQGCGASLGLRYVLKAYGRKTILVIPACCSTIIAGPWPYSALNANLFHTAF 76
E F H C GCG + +R VL A +L C + + +P+++ + H F
Sbjct: 16 EKFQGSHLLCPGCGHGIIVREVLNAVDGPIVLGNSTGCLEVCSAVYPHTSWDVPWIHIGF 75
Query: 77 ETTGAVISGIEAALKALGYKVKGE-DGIMVVGWAGDGGTADIGLQALSGFLERGHDALYI 135
E ISG+EA KAL K + + V + GDG + DIGLQ +SG +ERGHD YI
Sbjct: 76 ENGSTAISGVEAMYKALVNKGRYQGQKPKFVAFGGDGASYDIGLQFISGCMERGHDMTYI 135
Query: 136 MYDNEAYMNTGIQRSSSTPYGAWTTNTPGGKRHFLEKRHKKKVIDIVIAHRIPYAATASV 195
DNE Y NTG QRS STP GA T+ TP G F +K KK +++I+ +H +PY A S
Sbjct: 136 CLDNENYANTGGQRSGSTPLGASTSTTPAGSVSFGKKEKKKDIVNIMASHGVPYVAQLSP 195
Query: 196 AYPEDFLRKLKKAQKIPGPSFIQLFAPCPTGWRAPTDKTIEIARLAVQTAYFPLFEYENG 255
+D +K+K A GP FI +PC T W+ ++KTIE+A +AV + FPLFE NG
Sbjct: 196 NKWKDMNKKIKTALDTEGPCFINALSPCTTEWKFESNKTIELADMAVDSLMFPLFEIFNG 255
Query: 256 KYKINMPNPKKEPKPIEEFLKLQGRFKYMTKED----IEVLQKWVLEEWERLKKLAE 308
+ ++ + + P+ ++L Q RFK++ K++ IE LQK V E WE L++ E
Sbjct: 256 R-ELKITYRPRNIIPVRDYLGAQKRFKHLFKKENEHIIEELQKDVNERWEYLQRREE 311
>pir||A71858 pyruvate ferrodoxin oxidoreductase - Helicobacter pylori (strain
J99) >gi|4155627|gb|AAD06617.1| (AE001531) Pyruvate
ferrodoxin oxidoreductase [Helicobacter pylori J99]
Length = 314
Score = 205 bits (515), Expect = 8e-52
Identities = 116/297 (39%), Positives = 165/297 (55%), Gaps = 6/297 (2%)
Query: 17 ENFFAGHTACQGCGASLGLRYVLKAYGRKTILVIPACCSTIIAGPWPYSALNANLFHTAF 76
E F H C GCG + +R VL A +L C + + +P+++ + H F
Sbjct: 16 EKFQGSHLLCPGCGHGIIVREVLNAVDGPIVLGNSTGCLEVCSAVYPHTSWDVPWIHIGF 75
Query: 77 ETTGAVISGIEAALKALGYKVKGE-DGIMVVGWAGDGGTADIGLQALSGFLERGHDALYI 135
E ISG+EA KAL K + + V + GDG + DIG Q +SG +ERGHD YI
Sbjct: 76 ENGSTAISGVEAMYKALVNKGRYQGQRPKFVAFGGDGASYDIGFQFISGCMERGHDMTYI 135
Query: 136 MYDNEAYMNTGIQRSSSTPYGAWTTNTPGGKRHFLEKRHKKKVIDIVIAHRIPYAATASV 195
DNE Y NTG QRS STP GA T+ TP G F +K KK +++I+ +H +PY A S
Sbjct: 136 CLDNENYANTGGQRSGSTPLGASTSTTPAGSVSFGKKEKKKDIVNIMASHGVPYVAQLSP 195
Query: 196 AYPEDFLRKLKKAQKIPGPSFIQLFAPCPTGWRAPTDKTIEIARLAVQTAYFPLFEYENG 255
+D +K+K A GP FI +PC T W+ ++KTIE+A +AV + FPLFE NG
Sbjct: 196 NKWKDMNKKIKTALDTEGPCFINALSPCTTEWKFNSNKTIELADMAVDSLMFPLFEVFNG 255
Query: 256 KYKINMPNPKKEPKPIEEFLKLQGRFKYMTKED----IEVLQKWVLEEWERLKKLAE 308
+ ++ + + P+ ++L Q RFK++ K++ IE LQK V E WE L++ E
Sbjct: 256 R-ELKITYRPRNIIPVRDYLGAQKRFKHLFKKENEHIIEELQKDVNERWEYLQRREE 311
>emb|CAA70873.1| (Y09702) pyruvate-ferredoxin oxidoreductase [Desulfovibrio africanus]
Length = 1232
Score = 99.1 bits (243), Expect = 6e-20
Identities = 72/210 (34%), Positives = 102/210 (48%), Gaps = 17/210 (8%)
Query: 108 WAGDGGTADIGLQALSGFLERGHDALYIMYDNEAYMNTGIQRSSSTPYGAWTTNTPGGKR 167
+ GDG DIG L L G D + D E Y NTG Q S +TP GA GKR
Sbjct: 960 FGGDGWAYDIGYGGLDHVLASGEDVNVFVMDTEVYSNTGGQSSKATPTGAVAKFAAAGKR 1019
Query: 168 HFLEKRHKKKVIDIVIAHRIPYAATASVAY-PEDFLRKLKKAQKIPGPSFIQLFAPC-PT 225
KK + +V+ + Y AT S+ Y + FL+ LK+A+ PGPS + +A C
Sbjct: 1020 -----TGKKDLARMVMTYGYVYVATVSMGYSKQQFLKVLKEAESFPGPSLVIAYATCINQ 1074
Query: 226 GWRAPTDKTIEIARLAVQTAYFPLFEYE-----NGKYKINMPNPKKEPKPIEEFLKLQGR 280
G R K+ ++ AV++ Y+PLF Y+ GK + + K +EEFL Q R
Sbjct: 1075 GLRKGMGKSQDVMNTAVKSGYWPLFRYDPRLAAQGKNPFQL-DSKAPDGSVEEFLMAQNR 1133
Query: 281 FKYMTK---EDIEVLQKWVLEEWE-RLKKL 306
F + + ED + L+ V E + R K+L
Sbjct: 1134 FAVLDRSFPEDAKRLRAQVAHELDVRFKEL 1163
>pdb|1B0P|A Chain A, Crystal Structure Of Pyruvate-Ferredoxin Oxidoreductase From
Desulfovibrio Africanus >gi|4558092|pdb|1B0P|B Chain B,
Crystal Structure Of Pyruvate-Ferredoxin Oxidoreductase
From Desulfovibrio Africanus >gi|4558221|pdb|2PDA|A Chain
A, Crystal Structure Of The Complex Between Pyruvate-
Ferredoxin Oxidoreductase From Desulfovibrio Africanus
And Pyruvate. >gi|4558222|pdb|2PDA|B Chain B, Crystal
Structure Of The Complex Between Pyruvate- Ferredoxin
Oxidoreductase From Desulfovibrio Africanus And Pyruvate
Length = 1231
Score = 99.1 bits (243), Expect = 6e-20
Identities = 72/210 (34%), Positives = 102/210 (48%), Gaps = 17/210 (8%)
Query: 108 WAGDGGTADIGLQALSGFLERGHDALYIMYDNEAYMNTGIQRSSSTPYGAWTTNTPGGKR 167
+ GDG DIG L L G D + D E Y NTG Q S +TP GA GKR
Sbjct: 959 FGGDGWAYDIGYGGLDHVLASGEDVNVFVMDTEVYSNTGGQSSKATPTGAVAKFAAAGKR 1018
Query: 168 HFLEKRHKKKVIDIVIAHRIPYAATASVAY-PEDFLRKLKKAQKIPGPSFIQLFAPC-PT 225
KK + +V+ + Y AT S+ Y + FL+ LK+A+ PGPS + +A C
Sbjct: 1019 -----TGKKDLARMVMTYGYVYVATVSMGYSKQQFLKVLKEAESFPGPSLVIAYATCINQ 1073
Query: 226 GWRAPTDKTIEIARLAVQTAYFPLFEYE-----NGKYKINMPNPKKEPKPIEEFLKLQGR 280
G R K+ ++ AV++ Y+PLF Y+ GK + + K +EEFL Q R
Sbjct: 1074 GLRKGMGKSQDVMNTAVKSGYWPLFRYDPRLAAQGKNPFQL-DSKAPDGSVEEFLMAQNR 1132
Query: 281 FKYMTK---EDIEVLQKWVLEEWE-RLKKL 306
F + + ED + L+ V E + R K+L
Sbjct: 1133 FAVLDRSFPEDAKRLRAQVAHELDVRFKEL 1162
>pir||D70403 ferredoxin oxidoreductase beta subunit - Aquifex aeolicus
>gi|2983645|gb|AAC07212.1| (AE000728) ferredoxin
oxidoreductase beta subunit [Aquifex aeolicus]
Length = 286
Score = 93.2 bits (228), Expect = 4e-18
Identities = 77/262 (29%), Positives = 119/262 (45%), Gaps = 20/262 (7%)
Query: 11 LTLPFEENFFAGHTACQGCGASLGLRYVLKAYG--RKTILVIPACCSTIIAGPWPYSALN 68
+ LP+ + H+ C GC S RY+L + T++V C++++ +P+ AL+
Sbjct: 37 MDLPYAKELIEEHSLCAGCPESAAFRYILASLPSPEDTVIVNSTGCTSLV---FPHIALH 93
Query: 69 ANLFHTAFETTGAVISGIEAALKALGYKVKGEDGIMVVGWAGDGGTADIGLQALSGFLER 128
H F AV SGI+ L+ + K +D +++ AGDG T DIGL R
Sbjct: 94 T--VHPLFGNQNAVASGIKRVLE-WRFPDKPKDVVVI---AGDGATIDIGLDCTLQSFFR 147
Query: 129 GHDALYIMYDNEAYMNTGIQRSSSTPYGAWTTNTPGGKRHFLEKRHKKKVIDIVIAHRIP 188
I +DNE Y NTG Q S +TP G PGGK+ K + + I
Sbjct: 148 QEKITTICFDNEVYANTGGQDSGATPRGMEFKMAPGGKQW-----DKVPMWQLAIDSGCH 202
Query: 189 YAATASVAYPEDFLRKLKKAQKIP---GPSFIQLFAPCPTGWRAPTDKTIEIARLAVQTA 245
Y A +V+ P+ + +KKA + GP++I L+ PC +D+ + R
Sbjct: 203 YVARLTVSSPKKVEQVVKKAIYVAREVGPTYIHLYTPCILEIGLNSDQGLWEMRQR-DKE 261
Query: 246 YFPLFEYENGKYKINMPNPKKE 267
F FEY + K + K+E
Sbjct: 262 RFKFFEYMTDEAKEVIKKKKEE 283
>dbj|BAA95606.1| (AB042412) pyruvate:ferredoxin oxidoreductase beta subunit
[Hydrogenobacter thermophilus]
Length = 286
Score = 87.0 bits (212), Expect = 3e-16
Identities = 70/219 (31%), Positives = 100/219 (44%), Gaps = 21/219 (9%)
Query: 11 LTLPFEENFFAGHTACQGCGASLGLRYVLKAYGRK--TILVIPACCSTIIAGPWPYSALN 68
+ LP+ + H+ C GC S+ LRY+L + TI+V C++++ +P+ AL+
Sbjct: 37 MDLPYTKELIEEHSLCAGCPESMALRYILASLPNPEDTIIVNSTGCTSLV---FPHIALH 93
Query: 69 ANLFHTAFETTGAVISGIEAALK-ALGYKVKGEDGIMVVGWAGDGGTADIGLQALSGFLE 127
H+ F AV SGI+ L+ KVK VV AGDG DIGL
Sbjct: 94 T--VHSLFGNQNAVASGIKRVLEWRFPDKVKD-----VVVLAGDGAIVDIGLDCTLQSFF 146
Query: 128 RGHDALYIMYDNEAYMNTGIQRSSSTPYGAWTTNTPGGKRHFLEKRHKKKVIDIVIAHRI 187
R I +DNE Y NTG Q S T G P GK+ K + I I
Sbjct: 147 RQEKITTICFDNEVYANTGGQESGMTVKGHVFKMAPKGKQW-----DKVPMWQIAIDSGC 201
Query: 188 PYAATASVAYPEDFLRKLKKAQKIP---GPSFIQLFAPC 223
Y A +V+ P+ +KKA + GP+++ L+ PC
Sbjct: 202 HYVARLTVSSPKRVESVIKKAIYVAREVGPTYVHLYTPC 240
>gb|AAD55754.1|AF132546_1 (AF132546) pyruvate:ferredoxin oxidoreductase [Spironucleus
barkhanus]
Length = 1182
Score = 86.2 bits (210), Expect = 5e-16
Identities = 64/207 (30%), Positives = 103/207 (48%), Gaps = 17/207 (8%)
Query: 96 KVKGEDGIMVVGWAGDGGTADIGLQALSGFLERGHDALYIMYDNEAYMNTGIQRSSSTPY 155
++ + I+++G GDG DIG L L G D ++ D E Y NTG Q S STP
Sbjct: 970 EILNKPAIVIIG--GDGWAYDIGYGGLDHILASGQDFTILVVDTEVYSNTGGQCSKSTPL 1027
Query: 156 GAWTTNTPGGKRHFLEKRHKKKVIDIVIAHRIPYAATASVAYPEDF---LRKLKKAQKIP 212
GA GGKR+F KK + +IA + P AS+ +F ++ +++A +
Sbjct: 1028 GAVARFAAGGKRNF------KKDLG-MIAQQYPEVYVASINLNANFNHAVKSMREAVEWK 1080
Query: 213 GPSFIQLFAPCPTGWRAPTDKTIEIARLAVQTAYFPLFE-YENGKYKINMPNPKKEPKPI 271
GPS + ++PC ++ T+ + + +LA T Y+ ++ + K++ P P K +
Sbjct: 1081 GPSILIAYSPCIEHGQSMTE-SAQQEKLAAATGYWLSYDRHPERGLKMSTPKP---AKAV 1136
Query: 272 EEFLKLQGRFKYMTKEDIEVLQKWVLE 298
EFL Q RFK + + EV Q+ E
Sbjct: 1137 AEFLAKQNRFKQLASSEPEVAQQLAKE 1163
>sp|Q53046|NIFJ_RHORU PYRUVATE-FLAVODOXIN OXIDOREDUCTASE >gi|628896|pir||S41961 pyruvate
oxidoreductase - Rhodospirillum rubrum
>gi|453436|emb|CAA54651.1| (X77515) pyruvate
oxidoreductase [Rhodospirillum rubrum]
Length = 1191
Score = 80.0 bits (194), Expect = 3e-14
Identities = 91/366 (24%), Positives = 151/366 (40%), Gaps = 90/366 (24%)
Query: 25 ACQGCGASLGLRYVLKAYGRKTILVIPACCSTIIAGPWPYS-----------ALNANLFH 73
ACQGCG + L+ + + +G + ++ CS+I G P S A + +LF
Sbjct: 824 ACQGCGETPYLKLLTQMWGDRLMIANATGCSSIYGGNLPTSPYAKDANGRGPAWSNSLFE 883
Query: 74 T--------------------------AFETTGAVISGI--------EAALKA------- 92
A + +G ++ G+ EAA+ A
Sbjct: 884 DNAEFGLGFRLALDQHRSEAKRLLGALAPQLSGVLVDGLVANAANNDEAAIAAQRERVVS 943
Query: 93 --------LGYKVKGEDGIM-----VVGW--AGDGGTADIGLQALSGFLERGHDALYIMY 137
G++ + +G+ V W GDG DIG L + G + ++
Sbjct: 944 LRAELGGLTGWQARALEGLADYLVEKVVWIVGGDGWAYDIGYAGLDHVISSGRNVNILVM 1003
Query: 138 DNEAYMNTGIQRSSSTPYGAWTTNTPGGKRHFLEKRHKKKVIDIVIAHRIPYAAT-ASVA 196
D E Y NTG Q+S STP GA + GK KK + I +A+ Y A+ A A
Sbjct: 1004 DTEVYSNTGGQQSKSTPIGASAKFSVAGK-----ALPKKDLGQIAMANGHVYVASIAFGA 1058
Query: 197 YPEDFLRKLKKAQKIPGPSFIQLFAPC-PTGWRAPTDKTIEIA--RLAVQTAYFPLFEYE 253
LR L +A GPS I ++ C G+ D T ++ +LA++T Y+PL+ ++
Sbjct: 1059 SDNQTLRALSEAVSYEGPSLIIAYSHCIAHGY----DLTCGLSQQKLAIETGYWPLYRFD 1114
Query: 254 NGKYKINMP---NPKKEPKPIEEFLKLQGRFKYMTKED-------IEVLQKWVLEEWERL 303
K + + + +PI +++ +GRF+ + D +E ++ V W L
Sbjct: 1115 PRKMGVGPALSLDGVQPSRPIGDYMANEGRFRIIRDADPERYAMLLEAAEENVRSRWALL 1174
Query: 304 KKLAEV 309
++LA V
Sbjct: 1175 RQLAGV 1180
>pir||S70963 pyruvate (flavodoxin) dehydrogenase (EC 1.2.99.-) - Rhodospirillum
rubrum
Length = 1191
Score = 78.8 bits (191), Expect = 8e-14
Identities = 91/366 (24%), Positives = 150/366 (40%), Gaps = 90/366 (24%)
Query: 25 ACQGCGASLGLRYVLKAYGRKTILVIPACCSTIIAGPWPYS-----------ALNANLFH 73
ACQGCG + L+ + + +G + ++ CS+I G P S A + +LF
Sbjct: 824 ACQGCGETPYLKLLTQMWGDRLMIANATGCSSIYGGNLPTSPYAKDANGRGPAWSNSLFE 883
Query: 74 T--------------------------AFETTGAVISGI--------EAALKA------- 92
A + +G ++ G+ EAA+ A
Sbjct: 884 DNAEFGLGFRLALDQHRSEAKRLLGALAPQLSGVLVDGLVANAANNDEAAIAAQRERVVS 943
Query: 93 --------LGYKVKGEDGIM-----VVGW--AGDGGTADIGLQALSGFLERGHDALYIMY 137
G+ + +G+ V W GDG DIG L + G + ++
Sbjct: 944 LRAELGGLTGWGARALEGLADYLVEKVVWIVGGDGWAYDIGYAGLDHVISSGRNVNILVM 1003
Query: 138 DNEAYMNTGIQRSSSTPYGAWTTNTPGGKRHFLEKRHKKKVIDIVIAHRIPYAAT-ASVA 196
D E Y NTG Q+S STP GA + GK KK + I +A+ Y A+ A A
Sbjct: 1004 DTEVYSNTGGQQSKSTPIGASAKFSVAGK-----ALPKKDLGQIAMANGHVYVASIAFGA 1058
Query: 197 YPEDFLRKLKKAQKIPGPSFIQLFAPC-PTGWRAPTDKTIEIA--RLAVQTAYFPLFEYE 253
LR L +A GPS I ++ C G+ D T ++ +LA++T Y+PL+ ++
Sbjct: 1059 SDNQTLRALSEAVSYEGPSLIIAYSHCIAHGY----DLTCGLSQQKLAIETGYWPLYRFD 1114
Query: 254 NGKYKINMP---NPKKEPKPIEEFLKLQGRFKYMTKED-------IEVLQKWVLEEWERL 303
K + + + +PI +++ +GRF+ + D +E ++ V W L
Sbjct: 1115 PRKMGVGPALSLDGVQPSRPIGDYMANEGRFRIIRDADPERYAMLLEAAEENVRSRWALL 1174
Query: 304 KKLAEV 309
++LA V
Sbjct: 1175 RQLAGV 1180
>gb|AAB49653.1| (U30149) pyruvate:ferredoxin oxidoreductase [Entamoeba histolytica]
Length = 1162
Score = 78.8 bits (191), Expect = 8e-14
Identities = 59/191 (30%), Positives = 90/191 (46%), Gaps = 13/191 (6%)
Query: 110 GDGGTADIGLQALSGFLERGHDALYIMYDNEAYMNTGIQRSSSTPYGAWTTNTPGGKRHF 169
GDG DIG + L GH+ ++ D E Y NTG Q+S +T GA G
Sbjct: 956 GDGWAYDIGYNGVDHVLASGHNVNILVLDTEMYSNTGGQKSKATNLGAVVKFASSGC--- 1012
Query: 170 LEKRHKKKVIDIVIAHRIPYAATASV-AYPEDFLRKLKKAQKIPGPSFIQLFAPCPTGWR 228
KR KK + I +A+ Y A+ ++ A P + K+A+ G S I + PC
Sbjct: 1013 --KRPKKDLGAIAMAYGDVYVASIALGANPAQAFKAFKEAESYNGVSLIIAYCPCKE-QG 1069
Query: 229 APTDKTIEIARLAVQTAYFPLFEY-----ENGKYKINMPNPKKEPKPIEEFLKLQGRFKY 283
P K+IE A++AV + Y+ L+ Y E GK + + + + +E FL + RF
Sbjct: 1070 VPLQKSIEEAKMAVNSGYWSLYRYDPRLVEQGKPGLQL-DCSEVKGDLEAFLARENRFAL 1128
Query: 284 MTKEDIEVLQK 294
+ ++D E K
Sbjct: 1129 LGRKDKETADK 1139
>pir||S58236 pyruvate (flavodoxin) dehydrogenase (EC 1.2.99.-) - Entamoeba
histolytica >gi|929587|emb|CAA90575.1| (Z50193) pyruvate
oxidoreductase [Entamoeba histolytica]
Length = 1165
Score = 76.9 bits (186), Expect = 3e-13
Identities = 58/191 (30%), Positives = 90/191 (46%), Gaps = 14/191 (7%)
Query: 110 GDGGTADIGLQALSGFLERGHDALYIMYDNEAYMNTGIQRSSSTPYGAWTTNTPGGKRHF 169
GDG DIG + L GH+ ++ D E Y NTG Q+S +T GA G
Sbjct: 960 GDGWAYDIGYNGVDHVLASGHNVNILVLDTEMYSNTGGQKSKATNLGAVVKFASSGC--- 1016
Query: 170 LEKRHKKKVIDIVIAHRIPYAATASV-AYPEDFLRKLKKAQKIPGPSFIQLFAPCPTGWR 228
KR KK + I +A+ Y A+ ++ A P + K+A+ G PC + R
Sbjct: 1017 --KRPKKDLGAIAMAYGDVYVASIALGANPAQAFKAFKEAESYNGVFSYYCLLPCKS--R 1072
Query: 229 APTDKTIEIARLAVQTAYFPLFEY-----ENGKYKINMPNPKKEPKPIEEFLKLQGRFKY 283
+P K+IE A++AV + Y+ L+ Y E GK + + + + +E FL + RF
Sbjct: 1073 SPITKSIEEAKMAVNSGYWSLYRYDPRLVEQGKPGLQL-DCSEVKGDLEAFLARENRFAL 1131
Query: 284 MTKEDIEVLQK 294
+ ++D E K
Sbjct: 1132 LGRKDKETADK 1142
>dbj|BAB12024.1| (AB021127) pyruvate:NADP+ oxidoreductase [Euglena gracilis]
Length = 1803
Score = 75.3 bits (182), Expect = 9e-13
Identities = 53/185 (28%), Positives = 87/185 (46%), Gaps = 12/185 (6%)
Query: 110 GDGGTADIGLQALSGFLERGHDALYIMYDNEAYMNTGIQRSSSTPYGAWTTNTPGGKRHF 169
GDG DIG L L G + ++ D E Y NTG Q S ST + GGKR
Sbjct: 1029 GDGWANDIGFGGLDHVLASGQNLNVLVLDTEMYSNTGGQASKSTHMASVAKFALGGKR-- 1086
Query: 170 LEKRHKKKVIDIVIAHRIPYAATASVAYPEDFLRKLKKAQKIPGPSFIQLFAPC-PTGWR 228
+KK + ++ +++ Y AT S ++ +A+ GPS I +APC G R
Sbjct: 1087 ---TNKKNLTEMAMSYGNVYVATVSHGNMAQCVKAFVEAESYDGPSLIVGYAPCIEHGLR 1143
Query: 229 APTDKTIEIARLAVQTAYFPLFEYE-----NGKYKINMPNPKKEPKPIEEFLKLQGRFKY 283
A + ++ + A+ T Y+PL+ ++ GK + + K+ ++E+L Q R+
Sbjct: 1144 AGMARMVQESEAAIATGYWPLYRFDPRLATEGKNPFQL-DSKRIKGNLQEYLDRQNRYVN 1202
Query: 284 MTKED 288
+ K +
Sbjct: 1203 LKKNN 1207
>pir||A71047 probable ferredoxin oxidoreductase beta subunit - Pyrococcus
horikoshii >gi|3258094|dbj|BAA30777.1| (AP000006) 284aa
long hypothetical ferredoxin oxidoreductase beta subunit
[Pyrococcus horikoshii]
Length = 284
Score = 73.0 bits (176), Expect = 4e-12
Identities = 78/267 (29%), Positives = 113/267 (42%), Gaps = 35/267 (13%)
Query: 26 CQGCGASLGLRYV------LKAYGRKTILVIPACCSTIIAGPWPYSALNANLFHTAFETT 79
C GCG L LK R ++V CS IA P+ A+ HT T
Sbjct: 25 CPGCGGGTVLNAFANAIDQLKIDPRDLVVVSGIGCSAWIASPY----FLADTLHT---TH 77
Query: 80 GAVISGIEAALKALGYKVKGEDGIMVVGWAGDGGTADIGLQALSGFLERGHDALYIMYDN 139
G I+ A G KV D +VV +GDG A IG L R D I+ +N
Sbjct: 78 GRAIAF------ATGVKVGLPDKYVVV-ISGDGDLASIGGNHLIHAARRNVDITVILVNN 130
Query: 140 EAYMNTGIQRSSSTPYGAWTTNTPGGKRHFLEKRHKKKVIDIVIAHRIPYAATASVAYPE 199
Y TG Q + +TP+GA TT TP + H KV + V A Y A + A+
Sbjct: 131 FIYGMTGGQVAPTTPFGAITTTTP-----YRNIEHPLKVAETVAAAGASYVARWTTAHVY 185
Query: 200 DFLRKLKKAQKIPGPSFIQLFAPCPT--GWRAPTDKTIEIARLAVQTAYFPLFEYEN--- 254
+ +KKA G S +++ + CP G R + E+ R ++ + P+ + +N
Sbjct: 186 QLIESIKKALMTKGFSLVEVISQCPVQFGRRNKMKEPAEMLRWFLKNS-IPISKAKNMSE 244
Query: 255 ----GKYKINMPNPKKEPKPIEEFLKL 277
GK+ + +K P+ + E KL
Sbjct: 245 EELEGKFVVGEFVKRKRPEFVTELNKL 271
>pir||T43258 pyruvate (flavodoxin) dehydrogenase (EC 1.2.99.-) pfoA precursor,
hydrogenosomal - Trichomonas vaginalis
>gi|622958|gb|AAA85494.1| (U16822) pyruvate:ferredoxin
oxidoreductas proprotein [Trichomonas vaginalis]
Length = 1157
Score = 70.2 bits (169), Expect = 3e-11
Identities = 55/181 (30%), Positives = 86/181 (47%), Gaps = 9/181 (4%)
Query: 103 IMVVGWAGDGGTADIGLQALSGFLERGHDALYIMYDNEAYMNTGIQRSSSTPYGAWTTNT 162
+ +VG GDG DIG L L G + I+YD E Y NTG Q S +T GA +
Sbjct: 948 VWIVG--GDGWAYDIGYGGLDHVLASGENVKIIIYDTEVYSNTGGQCSKATSRGAVANFS 1005
Query: 163 PGGKRHFLEKRHKKKVIDIVIAHRIPY-AATASVAYPEDFLRKLKKAQKIPGPSFIQLFA 221
G + KK + I + +R Y A+T +A P L+ L++A++ GP+ I ++
Sbjct: 1006 AAG-----YTKAKKDLGAIAMTYRNIYVASTCLLADPNQALKALQEAKEYNGPAIIINYS 1060
Query: 222 PCPT-GWRAPTDKTIEIARLAVQTAYFPLFEYENGKYKINMPNPKKEPKPIEEFLKLQGR 280
PC G + T + + ++T Y LF Y K K + K+ ++ +K + R
Sbjct: 1061 PCINHGIKKGLGSTPKHCKDLLKTGYLNLFRYNPAKPKPLTVDTKQPDYNLDPLVKGENR 1120
Query: 281 F 281
F
Sbjct: 1121 F 1121
>gb|AAC18834.1| (AF064550) putative pyruvate-ferredoxin oxidoreductase [Clostridium
pasteurianum]
Length = 369
Score = 69.9 bits (168), Expect = 4e-11
Identities = 60/211 (28%), Positives = 93/211 (43%), Gaps = 18/211 (8%)
Query: 110 GDGGTADIGLQALSGFLERGHDALYIMYDNEAYMNTGIQRSSSTPYGAWTTNTPGGKRHF 169
GDG DIG L + G D + D E Y NTG Q S STP GA GK
Sbjct: 159 GDGWAYDIGFGGLDQVISTGDDVNIFVLDTEIYSNTGGQSSKSTPTGATAKFAAAGK--- 215
Query: 170 LEKRHKKKVIDIVIAHRIPYAATASV-AYPEDFLRKLKKAQKIPGPSFIQLFAPCPT-GW 227
K KK + + +++ Y A ++ A ++ + +A+ GPS I +APC + G
Sbjct: 216 --KTRKKDLGMMAMSYGYVYVAQIAMGANMNQTIKAITEAESYDGPSLIIAYAPCISHGI 273
Query: 228 RAPTDKTIEIARLAVQTAYFPLFEY-----ENGK--YKINMPNPKKEPKPI----EEFLK 276
R+ +I + AV T Y+ L+ + E GK + + P E K +
Sbjct: 274 RSGMGTSIMEQKKAVNTGYWHLYRFSPLLKEEGKNPFVLESKEPTGEFKNFINGEVRYTA 333
Query: 277 LQGRFKYMTKEDIEVLQKWVLEEWERLKKLA 307
L+ F + + ++ +K E +E K+LA
Sbjct: 334 LRTMFPEVADKMFDLAEKNAKERYESYKRLA 364
>emb|CAB43933.1| (Y17726) pyruvate ferredoxin oxidoreductase [Clostridium
pasteurianum]
Length = 1175
Score = 69.9 bits (168), Expect = 4e-11
Identities = 60/211 (28%), Positives = 93/211 (43%), Gaps = 18/211 (8%)
Query: 110 GDGGTADIGLQALSGFLERGHDALYIMYDNEAYMNTGIQRSSSTPYGAWTTNTPGGKRHF 169
GDG DIG L + G D + D E Y NTG Q S STP GA GK
Sbjct: 965 GDGWAYDIGFGGLDQVISTGDDVNIFVLDTEIYSNTGGQSSKSTPTGATAKFAAAGK--- 1021
Query: 170 LEKRHKKKVIDIVIAHRIPYAATASV-AYPEDFLRKLKKAQKIPGPSFIQLFAPCPT-GW 227
K KK + + +++ Y A ++ A ++ + +A+ GPS I +APC + G
Sbjct: 1022 --KTRKKDLGMMAMSYGYVYVAQIAMGANMNQTIKAITEAESYDGPSLIIAYAPCISHGI 1079
Query: 228 RAPTDKTIEIARLAVQTAYFPLFEY-----ENGK--YKINMPNPKKEPKPI----EEFLK 276
R+ +I + AV T Y+ L+ + E GK + + P E K +
Sbjct: 1080 RSGMGTSIMEQKKAVNTGYWHLYRFSPLLKEEGKNPFVLESKEPTGEFKNFINGEVRYTA 1139
Query: 277 LQGRFKYMTKEDIEVLQKWVLEEWERLKKLA 307
L+ F + + ++ +K E +E K+LA
Sbjct: 1140 LRTMFPEVADKMFDLAEKNAKERYESYKRLA 1170
>pir||T43259 pyruvate (flavodoxin) dehydrogenase (EC 1.2.99.-) pfoB precursor,
hydrogenosomal - Trichomonas vaginalis
>gi|622960|gb|AAA85495.1| (U16823) pyruvate:ferredoxin
oxidoreductase proprotein [Trichomonas vaginalis]
Length = 1157
Score = 69.1 bits (166), Expect = 7e-11
Identities = 54/181 (29%), Positives = 86/181 (46%), Gaps = 9/181 (4%)
Query: 103 IMVVGWAGDGGTADIGLQALSGFLERGHDALYIMYDNEAYMNTGIQRSSSTPYGAWTTNT 162
+ +VG GDG DIG L L G + I+YD E Y NTG Q S +T GA +
Sbjct: 948 VWIVG--GDGWAYDIGYGGLDHVLASGENVKIIIYDTEVYSNTGGQCSKATSRGAVANFS 1005
Query: 163 PGGKRHFLEKRHKKKVIDIVIAHRIPY-AATASVAYPEDFLRKLKKAQKIPGPSFIQLFA 221
G + KK + I + ++ Y A+T +A P L+ L++A++ GP+ I ++
Sbjct: 1006 AAG-----YTKAKKDLGAIAMTYKNIYVASTCLLADPNQALKALQEAKEYNGPAIIINYS 1060
Query: 222 PCPT-GWRAPTDKTIEIARLAVQTAYFPLFEYENGKYKINMPNPKKEPKPIEEFLKLQGR 280
PC G + T + + ++T Y LF Y K K + K+ ++ +K + R
Sbjct: 1061 PCINHGIKKGLGSTPKHCKDLLKTGYLNLFRYNPSKDKPLTVDTKQPDYNLDPLVKGENR 1120
Query: 281 F 281
F
Sbjct: 1121 F 1121
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.320 0.138 0.426
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 125000923
Number of Sequences: 2977
Number of extensions: 5537448
Number of successful extensions: 14605
Number of sequences better than 1.0e-10: 38
Number of HSP's better than 0.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 14494
Number of HSP's gapped (non-prelim): 50
length of query: 311
length of database: 189,106,746
effective HSP length: 52
effective length of query: 259
effective length of database: 157,985,422
effective search space: 40918224298
effective search space used: 40918224298
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.8 bits)
S2: 165 (68.7 bits)