BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB1475 (porA) DE:PYRUVATE SYNTHASE SUBUNIT PORA (EC 1.2.7.1)
(PYRUVATE OXIDOREDUCTASE ALPHA CHAIN) (POR)
(395 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||G75046 pyruvate synthase (EC 1.2.7.1) alpha chain PAB1475 -... 786 0.0
pir||E71114 probable ferredoxin oxidoreductase alpha-2 subunit -... 755 0.0
sp|O73986|PORA_PYRHO PYRUVATE SYNTHASE SUBUNIT PORA (PYRUVATE OX... 755 0.0
sp|Q51804|PORA_PYRFU PYRUVATE SYNTHASE SUBUNIT PORA (PYRUVATE OX... 727 0.0
gb|AAF91264.1|AF230199_6 (AF230199) pyruvate oxidoreductase alph... 430 e-119
sp|P56810|PORA_METTH PYRUVATE SYNTHASE SUBUNIT PORA (PYRUVATE OX... 414 e-114
sp|Q57715|PORA_METJA PYRUVATE SYNTHASE SUBUNIT PORA (PYRUVATE OX... 411 e-114
sp|Q51801|VORA_PYRFU KETOISOVALERATE OXIDOREDUCTASE SUBUNIT VORA... 392 e-108
pir||A71114 probable ferredoxin oxidoreductase alpha subunit - P... 388 e-107
sp|O58413|VORA_PYRHO KETOISOVALERATE OXIDOREDUCTASE SUBUNIT VORA... 388 e-107
pir||B75047 probable 2-oxoisovalerate--ferredoxin oxidoreductase... 383 e-105
emb|CAA59457.1| (X85171) alpha subunit of pyruvate ferredoxin ox... 340 2e-92
sp|O05651|PORA_THEMA PYRUVATE SYNTHASE SUBUNIT PORA (PYRUVATE OX... 340 2e-92
emb|CAC11767.1| (AL445064) probable 2-ketovalerate ferredoxin ox... 326 3e-88
gi|11499291 pyruvate ferredoxin oxidoreductase, subunit alpha (p... 322 5e-87
gb|AAK41454.1| Pyruvate synthase alpha chain (Pyruvic-ferredoxin... 308 6e-83
gb|AAK42867.1| Pyruvate synthase alpha chain (Pyruvic-ferredoxin... 282 5e-75
pir||H71857 pyruvate ferrodoxin oxidoreductase - Helicobacter py... 277 2e-73
pir||F64658 pyruvate synthase (EC 1.2.7.1) alpha chain - Helicob... 275 6e-73
gb|AAC02293.1| (AF013980) pyruvate:ferredoxin oxidoreductase alp... 273 2e-72
gb|AAK42308.1| Pyruvate synthase alpha chain (Pyruvic-ferredoxin... 264 2e-69
pir||S74041 pyruvate synthase (EC 1.2.7.1) alpha chain - Sulfolo... 264 2e-69
gi|11499635 2-ketoisovalerate ferredoxin oxidoreductase, subunit... 243 3e-63
gb|AAC38206.1| (AF021092) PorA subunit of pyruvate:flavodoxin ox... 230 2e-59
emb|CAB43933.1| (Y17726) pyruvate ferredoxin oxidoreductase [Clo... 165 9e-40
gb|AAD55756.1|AF132673_1 (AF132673) pyruvate:ferredoxin oxidored... 162 5e-39
emb|CAB43935.1| (Y17727) pyruvate ferredoxin oxidoreductase [Clo... 159 7e-38
pir||A81294 pyruvate-flavodoxin oxidoreductase Cj1476c [imported... 151 2e-35
sp|P19543|NIFJ_ENTAG PYRUVATE-FLAVODOXIN OXIDOREDUCTASE >gi|4690... 150 3e-35
sp|P03833|NIFJ_KLEPN PYRUVATE-FLAVODOXIN OXIDOREDUCTASE >gi|4382... 148 1e-34
pir||QQKBFP pyruvate (flavodoxin) dehydrogenase nifJ (EC 1.2.99.... 148 1e-34
pir||G71262 probable pyruvate (flavodoxin) dehydrogenase (EC 1.2... 145 7e-34
gb|AAC83148.1| (AF061850) putative pyruvate oxidoreductase; POR ... 143 3e-33
emb|CAA70873.1| (Y09702) pyruvate-ferredoxin oxidoreductase [Des... 138 9e-32
pdb|1B0P|A Chain A, Crystal Structure Of Pyruvate-Ferredoxin Oxi... 138 9e-32
emb|CAA57480.1| (X81893) nifJ [Enterobacter agglomerans] 138 1e-31
pir||C70403 ferredoxin oxidoreductase alpha subunit - Aquifex ae... 138 1e-31
dbj|BAA95605.1| (AB042412) pyruvate:ferredoxin oxidoreductase al... 138 1e-31
sp|P52647|NIFJ_ECOLI PROBABLE PYRUVATE-FLAVODOXIN OXIDOREDUCTASE... 134 1e-30
sp|P52965|NIFJ_SYNY3 PUTATIVE PYRUVATE-FLAVODOXIN OXIDOREDUCTASE... 134 2e-30
emb|CAB43934.1| (Y17727) pyruvate ferredoxin oxidoreductase [Clo... 133 3e-30
pir||F82447 pyruvate-flavoredoxin oxidoreductase VCA0530 [import... 130 3e-29
pir||B70400 ferredoxin oxidoreductase alpha subunit - Aquifex ae... 129 4e-29
sp|Q06879|NIFJ_ANASP PYRUVATE-FLAVODOXIN OXIDOREDUCTASE >gi|2126... 123 2e-27
gb|AAD55754.1|AF132546_1 (AF132546) pyruvate:ferredoxin oxidored... 119 5e-26
dbj|BAB12024.1| (AB021127) pyruvate:NADP+ oxidoreductase [Euglen... 115 7e-25
gb|AAB49653.1| (U30149) pyruvate:ferredoxin oxidoreductase [Enta... 115 9e-25
sp|Q53046|NIFJ_RHORU PYRUVATE-FLAVODOXIN OXIDOREDUCTASE >gi|6288... 113 4e-24
pir||S70963 pyruvate (flavodoxin) dehydrogenase (EC 1.2.99.-) - ... 113 4e-24
pir||H72214 hypothetical protein TM1759 - Thermotoga maritima (s... 112 8e-24
pir||T43259 pyruvate (flavodoxin) dehydrogenase (EC 1.2.99.-) pf... 111 1e-23
pir||S58236 pyruvate (flavodoxin) dehydrogenase (EC 1.2.99.-) - ... 109 4e-23
pir||T43258 pyruvate (flavodoxin) dehydrogenase (EC 1.2.99.-) pf... 109 5e-23
pir||C75168 2-ketoglutarate ferredoxin oxidoreductase, chain alp... 108 2e-22
pir||B71047 probable ferredoxin oxidoreductase alpha subunit - P... 105 1e-21
pir||T18528 probable pyruvate (flavodoxin) dehydrogenase (EC 1.2... 103 3e-21
pir||A69194 2-oxoacid--ferredoxin oxidoreductase (EC 1.2.7.-) al... 98 2e-19
sp|O26800|VORB_METTH KETOISOVALERATE OXIDOREDUCTASE SUBUNIT VORB... 98 2e-19
pir||H69004 2-oxoglutarate--ferredoxin oxidoreductase (EC 1.2.7.... 94 2e-18
sp|O27112|KORA_METTH 2-OXOGLUTARATE SYNTHASE SUBUNIT KORA (2-KET... 94 2e-18
gb|AAD55757.1|AF146519_1 (AF146519) putative pyruvate:ferredoxin... 90 3e-17
pir||F75168 2-ketoglutarate ferredoxin oxidoreductase, chain alp... 89 7e-17
pir||F71046 probable ferredoxin oxidoreductase alpha subunit - P... 87 3e-16
sp|Q57724|KORA_METJA 2-OXOGLUTARATE SYNTHASE SUBUNIT KORA (2-KET... 85 1e-15
emb|CAA34396.1| (X16345) nifJ [Klebsiella pneumoniae] 80 3e-14
pir||E64593 2-oxoacid--ferredoxin oxidoreductase (EC 1.2.7.-) al... 72 1e-11
gb|AAC38211.1| (AF021094) OorA subunit of 2-oxoglutarate:accepto... 71 2e-11
emb|CAA25502.1| (X01007) URF [Klebsiella pneumoniae] 71 3e-11
pir||G71919 chain of 2-oxoglutarate oxidoreductase - Helicobacte... 69 6e-11
>pir||G75046 pyruvate synthase (EC 1.2.7.1) alpha chain PAB1475 - Pyrococcus
abyssi (strain Orsay) >gi|5458781|emb|CAB50268.1|
(AJ248287) PYRUVATE SYNTHASE SUBUNIT PORA (EC 1.2.7.1)
(PYRUVATE OXIDOREDUCTASE ALPHA CHAIN) (POR) [Pyrococcus
abyssi]
Length = 395
Score = 786 bits (2007), Expect = 0.0
Identities = 395/395 (100%), Positives = 395/395 (100%)
Query: 1 MPIRTVMKANEAAAWAAKLAKPKVIAAFPITPSTLVPEKISEFVANGELDAEFIKVESEH 60
MPIRTVMKANEAAAWAAKLAKPKVIAAFPITPSTLVPEKISEFVANGELDAEFIKVESEH
Sbjct: 1 MPIRTVMKANEAAAWAAKLAKPKVIAAFPITPSTLVPEKISEFVANGELDAEFIKVESEH 60
Query: 61 SAISALVGASAAGVRTFTATASQGLALMHEVLFIAAGMRLPIVMAIGNRALSAPINIWND 120
SAISALVGASAAGVRTFTATASQGLALMHEVLFIAAGMRLPIVMAIGNRALSAPINIWND
Sbjct: 61 SAISALVGASAAGVRTFTATASQGLALMHEVLFIAAGMRLPIVMAIGNRALSAPINIWND 120
Query: 121 WQDTISQRDTGWIQFYAENNQEALDLILLAYKVAEDERVLLPAMVGFDAFILTHTVEPVE 180
WQDTISQRDTGWIQFYAENNQEALDLILLAYKVAEDERVLLPAMVGFDAFILTHTVEPVE
Sbjct: 121 WQDTISQRDTGWIQFYAENNQEALDLILLAYKVAEDERVLLPAMVGFDAFILTHTVEPVE 180
Query: 181 IPDQEVVDEFLGEYEPKHAYLDPKRPITQGTLAFPAHYMEARYLVWEAMENARKVIDEAF 240
IPDQEVVDEFLGEYEPKHAYLDPKRPITQGTLAFPAHYMEARYLVWEAMENARKVIDEAF
Sbjct: 181 IPDQEVVDEFLGEYEPKHAYLDPKRPITQGTLAFPAHYMEARYLVWEAMENARKVIDEAF 240
Query: 241 AEFEKKFGRKYQKIEEYRTDDAEIIFVTMGSLAGTLKDWVDKKREEGYKVGAAKMTVYRP 300
AEFEKKFGRKYQKIEEYRTDDAEIIFVTMGSLAGTLKDWVDKKREEGYKVGAAKMTVYRP
Sbjct: 241 AEFEKKFGRKYQKIEEYRTDDAEIIFVTMGSLAGTLKDWVDKKREEGYKVGAAKMTVYRP 300
Query: 301 FPVEEIRELAKKTKVLAFIEKDISMGLYGAVFTDASAALINESEKPLMLDFIAGLGGRDV 360
FPVEEIRELAKKTKVLAFIEKDISMGLYGAVFTDASAALINESEKPLMLDFIAGLGGRDV
Sbjct: 301 FPVEEIRELAKKTKVLAFIEKDISMGLYGAVFTDASAALINESEKPLMLDFIAGLGGRDV 360
Query: 361 TFNQLDEALSIAKEALEKGKVEKPIHWIGLRKELL 395
TFNQLDEALSIAKEALEKGKVEKPIHWIGLRKELL
Sbjct: 361 TFNQLDEALSIAKEALEKGKVEKPIHWIGLRKELL 395
>pir||E71114 probable ferredoxin oxidoreductase alpha-2 subunit - Pyrococcus
horikoshii >gi|3257092|dbj|BAA29775.1| (AP000003) 398aa
long hypothetical ferredoxin oxidoreductase alpha-2
subunit [Pyrococcus horikoshii]
Length = 398
Score = 755 bits (1928), Expect = 0.0
Identities = 375/395 (94%), Positives = 388/395 (97%)
Query: 1 MPIRTVMKANEAAAWAAKLAKPKVIAAFPITPSTLVPEKISEFVANGELDAEFIKVESEH 60
MPIRTVMKANEAAAWAAKLAKPKVIAAFPITPSTLVPEKISEFVANGELDAEFIKVESEH
Sbjct: 4 MPIRTVMKANEAAAWAAKLAKPKVIAAFPITPSTLVPEKISEFVANGELDAEFIKVESEH 63
Query: 61 SAISALVGASAAGVRTFTATASQGLALMHEVLFIAAGMRLPIVMAIGNRALSAPINIWND 120
SAISA+VGASAAGVRTFTATASQGLALMHEVLFIAAGMRLPIVMAIGNR+LSAPINIWND
Sbjct: 64 SAISAVVGASAAGVRTFTATASQGLALMHEVLFIAAGMRLPIVMAIGNRSLSAPINIWND 123
Query: 121 WQDTISQRDTGWIQFYAENNQEALDLILLAYKVAEDERVLLPAMVGFDAFILTHTVEPVE 180
WQD+ISQRDTGWIQFYAENNQEALDLILLAYKVAEDERVLLPAMVGFDAFILTHTVEPVE
Sbjct: 124 WQDSISQRDTGWIQFYAENNQEALDLILLAYKVAEDERVLLPAMVGFDAFILTHTVEPVE 183
Query: 181 IPDQEVVDEFLGEYEPKHAYLDPKRPITQGTLAFPAHYMEARYLVWEAMENARKVIDEAF 240
IPDQEVVDEFLGEYEPKHAYLDPKRPITQGTLAFPAHYMEA+YLVW+AME ARKVIDEAF
Sbjct: 184 IPDQEVVDEFLGEYEPKHAYLDPKRPITQGTLAFPAHYMEAKYLVWDAMEKARKVIDEAF 243
Query: 241 AEFEKKFGRKYQKIEEYRTDDAEIIFVTMGSLAGTLKDWVDKKREEGYKVGAAKMTVYRP 300
AEFEK+FGRKYQKIEEY+TDDAEIIFVTMGSLAGTLKDWVDKKREEGYKVGAAKMTVYRP
Sbjct: 244 AEFEKRFGRKYQKIEEYKTDDAEIIFVTMGSLAGTLKDWVDKKREEGYKVGAAKMTVYRP 303
Query: 301 FPVEEIRELAKKTKVLAFIEKDISMGLYGAVFTDASAALINESEKPLMLDFIAGLGGRDV 360
FPVEEIR LAKK KVL FIEKDIS+GLYGAVF DASAAL+NESE+PLMLDFIAGLGGRDV
Sbjct: 304 FPVEEIRALAKKAKVLGFIEKDISIGLYGAVFIDASAALVNESERPLMLDFIAGLGGRDV 363
Query: 361 TFNQLDEALSIAKEALEKGKVEKPIHWIGLRKELL 395
TF QLD+AL IA+EALEKG+VEKPIHWIGLRKELL
Sbjct: 364 TFGQLDDALRIAEEALEKGEVEKPIHWIGLRKELL 398
>sp|O73986|PORA_PYRHO PYRUVATE SYNTHASE SUBUNIT PORA (PYRUVATE OXIDOREDUCTASE ALPHA
CHAIN) (POR) (PYRUVIC-FERREDOXIN OXIDOREDUCTASE ALPHA
SUBUNIT)
Length = 395
Score = 755 bits (1928), Expect = 0.0
Identities = 375/395 (94%), Positives = 388/395 (97%)
Query: 1 MPIRTVMKANEAAAWAAKLAKPKVIAAFPITPSTLVPEKISEFVANGELDAEFIKVESEH 60
MPIRTVMKANEAAAWAAKLAKPKVIAAFPITPSTLVPEKISEFVANGELDAEFIKVESEH
Sbjct: 1 MPIRTVMKANEAAAWAAKLAKPKVIAAFPITPSTLVPEKISEFVANGELDAEFIKVESEH 60
Query: 61 SAISALVGASAAGVRTFTATASQGLALMHEVLFIAAGMRLPIVMAIGNRALSAPINIWND 120
SAISA+VGASAAGVRTFTATASQGLALMHEVLFIAAGMRLPIVMAIGNR+LSAPINIWND
Sbjct: 61 SAISAVVGASAAGVRTFTATASQGLALMHEVLFIAAGMRLPIVMAIGNRSLSAPINIWND 120
Query: 121 WQDTISQRDTGWIQFYAENNQEALDLILLAYKVAEDERVLLPAMVGFDAFILTHTVEPVE 180
WQD+ISQRDTGWIQFYAENNQEALDLILLAYKVAEDERVLLPAMVGFDAFILTHTVEPVE
Sbjct: 121 WQDSISQRDTGWIQFYAENNQEALDLILLAYKVAEDERVLLPAMVGFDAFILTHTVEPVE 180
Query: 181 IPDQEVVDEFLGEYEPKHAYLDPKRPITQGTLAFPAHYMEARYLVWEAMENARKVIDEAF 240
IPDQEVVDEFLGEYEPKHAYLDPKRPITQGTLAFPAHYMEA+YLVW+AME ARKVIDEAF
Sbjct: 181 IPDQEVVDEFLGEYEPKHAYLDPKRPITQGTLAFPAHYMEAKYLVWDAMEKARKVIDEAF 240
Query: 241 AEFEKKFGRKYQKIEEYRTDDAEIIFVTMGSLAGTLKDWVDKKREEGYKVGAAKMTVYRP 300
AEFEK+FGRKYQKIEEY+TDDAEIIFVTMGSLAGTLKDWVDKKREEGYKVGAAKMTVYRP
Sbjct: 241 AEFEKRFGRKYQKIEEYKTDDAEIIFVTMGSLAGTLKDWVDKKREEGYKVGAAKMTVYRP 300
Query: 301 FPVEEIRELAKKTKVLAFIEKDISMGLYGAVFTDASAALINESEKPLMLDFIAGLGGRDV 360
FPVEEIR LAKK KVL FIEKDIS+GLYGAVF DASAAL+NESE+PLMLDFIAGLGGRDV
Sbjct: 301 FPVEEIRALAKKAKVLGFIEKDISIGLYGAVFIDASAALVNESERPLMLDFIAGLGGRDV 360
Query: 361 TFNQLDEALSIAKEALEKGKVEKPIHWIGLRKELL 395
TF QLD+AL IA+EALEKG+VEKPIHWIGLRKELL
Sbjct: 361 TFGQLDDALRIAEEALEKGEVEKPIHWIGLRKELL 395
>sp|Q51804|PORA_PYRFU PYRUVATE SYNTHASE SUBUNIT PORA (PYRUVATE OXIDOREDUCTASE ALPHA
CHAIN) (POR) (PYRUVIC-FERREDOXIN OXIDOREDUCTASE ALPHA
SUBUNIT) >gi|11280155|pir||T45088 pyruvate synthase (EC
1.2.7.1) alpha-2 chain [imported] - Pyrococcus furiosus
>gi|1197363|emb|CAA59505.1| (X85250) pyruvate ferredoxin
oxidoreductase alpha-2 [Pyrococcus furiosus]
Length = 396
Score = 727 bits (1857), Expect = 0.0
Identities = 357/395 (90%), Positives = 383/395 (96%)
Query: 1 MPIRTVMKANEAAAWAAKLAKPKVIAAFPITPSTLVPEKISEFVANGELDAEFIKVESEH 60
MPIR VMKANEAAAWAAKLAKPKVIAAFPITPSTL+PEKISEFVANGELDAEFIKVESEH
Sbjct: 1 MPIRKVMKANEAAAWAAKLAKPKVIAAFPITPSTLIPEKISEFVANGELDAEFIKVESEH 60
Query: 61 SAISALVGASAAGVRTFTATASQGLALMHEVLFIAAGMRLPIVMAIGNRALSAPINIWND 120
SAISA VGA+AAGVRTFTATASQGLALMHE+LFIAAGMRLPIVMAIGNRALSAPINIWND
Sbjct: 61 SAISACVGAAAAGVRTFTATASQGLALMHEILFIAAGMRLPIVMAIGNRALSAPINIWND 120
Query: 121 WQDTISQRDTGWIQFYAENNQEALDLILLAYKVAEDERVLLPAMVGFDAFILTHTVEPVE 180
WQDTISQRDTGW+QFYAENNQEALDLIL+AYKVAEDERVLLPAMVGFDAFILTHTVEPVE
Sbjct: 121 WQDTISQRDTGWMQFYAENNQEALDLILIAYKVAEDERVLLPAMVGFDAFILTHTVEPVE 180
Query: 181 IPDQEVVDEFLGEYEPKHAYLDPKRPITQGTLAFPAHYMEARYLVWEAMENARKVIDEAF 240
IPDQEVVDEFLGEYEPKHAY+DP RPITQG+LAFPAHYME+RY VWEAME A+KVIDEAF
Sbjct: 181 IPDQEVVDEFLGEYEPKHAYIDPARPITQGSLAFPAHYMESRYTVWEAMERAKKVIDEAF 240
Query: 241 AEFEKKFGRKYQKIEEYRTDDAEIIFVTMGSLAGTLKDWVDKKREEGYKVGAAKMTVYRP 300
AEFEKKFGRKYQKIEEY+T+DA+IIFVTMGSLAGTL +W+DKKREEGYKVGAAK+TVYRP
Sbjct: 241 AEFEKKFGRKYQKIEEYKTEDADIIFVTMGSLAGTLNEWIDKKREEGYKVGAAKITVYRP 300
Query: 301 FPVEEIRELAKKTKVLAFIEKDISMGLYGAVFTDASAALINESEKPLMLDFIAGLGGRDV 360
FPVEEIRELAKK KVLAF+EK+I++GLYGAVFTDASAALINESEKPLM+DFI G GGRDV
Sbjct: 301 FPVEEIRELAKKAKVLAFLEKNITIGLYGAVFTDASAALINESEKPLMVDFIVGHGGRDV 360
Query: 361 TFNQLDEALSIAKEALEKGKVEKPIHWIGLRKELL 395
TFNQLDEAL IA++AL++GKVE PI+WIGLR EL+
Sbjct: 361 TFNQLDEALEIAEKALKEGKVENPINWIGLRWELV 395
>gb|AAF91264.1|AF230199_6 (AF230199) pyruvate oxidoreductase alpha subunit [Methanococcus
maripaludis]
Length = 387
Score = 430 bits (1093), Expect = e-119
Identities = 223/393 (56%), Positives = 286/393 (72%), Gaps = 16/393 (4%)
Query: 6 VMKANEAAAWAAKLAKPKVIAAFPITPSTLVPEKISEFVANGELDAEFIKVESEHSAISA 65
V+ AAA AAKLA VIAA+PITP T EK+++FVANGEL+AE+IKVESEHSA+SA
Sbjct: 6 VITGTSAAAEAAKLADVDVIAAYPITPQTTCVEKLADFVANGELNAEYIKVESEHSAMSA 65
Query: 66 LVGASAAGVRTFTATASQGLALMHEVLFIAAGMRLPIVMAIGNRALSAPINIWNDWQDTI 125
+GASAAG R FTAT+SQGLALMHEVLF AAGMR+P+VM NRALSAPINIWND QD++
Sbjct: 66 SIGASAAGARAFTATSSQGLALMHEVLFAAAGMRVPVVMMNANRALSAPINIWNDQQDSL 125
Query: 126 SQRDTGWIQFYAENNQEALDLILLAYKVAEDERVLLPAMVGFDAFILTHTVEPVEIPDQE 185
SQRDTGWIQ YAE+NQE LDL++ A+K+AEDE+VLLP MV D FILTHTVEPV +P QE
Sbjct: 126 SQRDTGWIQLYAEDNQEVLDLVIQAFKIAEDEKVLLPVMVNLDGFILTHTVEPVTLPKQE 185
Query: 186 VVDEFLGEYEPKHAYLDPKRPITQGTLAFPAHYMEARYLVWEAMENARKVIDEAFAEFEK 245
V +F+G YEPKHAYLDPK+P+TQG L P +YME RY + AMENA+KVI + F +
Sbjct: 186 NVLDFIGTYEPKHAYLDPKKPMTQGALGDPNYYMETRYAIETAMENAKKVIADVHDAFAE 245
Query: 246 KFGRKYQK--IEEYRTDDAEIIFVTMGSLAGTLKDWVDKKREEGYKVGAAKMTVYRPFPV 303
KF R Y IE Y + AE + V MGS+ GT+KD +D K++EG ++G K+ YRP P+
Sbjct: 246 KFNRAYGNGLIESYNLEKAENVIVAMGSICGTIKDMIDLKKKEGVEIGLLKIRCYRPLPI 305
Query: 304 EEIRELAKKTKVLAFIEKDISMGL-YGAVFTDASAALINESEKPLMLDFIAGLGGRDVTF 362
E I++ K K +A ++K IS+G+ GA++ D ++ L ++ +++I GLGGRD+T
Sbjct: 306 EMIKDALKNAKNVAILDKSISLGMNKGAIYADVASHLKDKK----TVNYIVGLGGRDIT- 360
Query: 363 NQLDEALSIAK--EALEKGKVEKPIHWIGLRKE 393
++ L I E E GK +WIGL++E
Sbjct: 361 --PEDILGIYDDVEISEDGKT----NWIGLKEE 387
>sp|P56810|PORA_METTH PYRUVATE SYNTHASE SUBUNIT PORA (PYRUVATE OXIDOREDUCTASE ALPHA
CHAIN) (POR) (PYRUVIC-FERREDOXIN OXIDOREDUCTASE ALPHA
SUBUNIT) >gi|7449945|pir||E69099 pyruvate synthase (EC
1.2.7.1) alpha chain - Methanobacterium
thermoautotrophicum (strain Delta H)
>gi|2622870|gb|AAB86209.1| (AE000929) pyruvate
oxidoreductase, alpha subunit [Methanobacterium
thermoautotrophicum]
Length = 383
Score = 414 bits (1052), Expect = e-114
Identities = 209/388 (53%), Positives = 284/388 (72%), Gaps = 11/388 (2%)
Query: 6 VMKANEAAAWAAKLAKPKVIAAFPITPSTLVPEKISEFVANGELDAEFIKVESEHSAISA 65
V+ AN+A A AAKLAKPKVI +PITP T + E +++FVA+GEL AE+I+VESEHSA+SA
Sbjct: 5 VISANQAVAEAAKLAKPKVIPVYPITPQTSISEYLAKFVADGELKAEYIRVESEHSAMSA 64
Query: 66 LVGASAAGVRTFTATASQGLALMHEVLFIAAGMRLPIVMAIGNRALSAPINIWNDWQDTI 125
VGAS AGVR FTAT+SQGLALMHE+++ AAG+R PIVMA NRALSAP++IWND QD+I
Sbjct: 65 CVGASGAGVRVFTATSSQGLALMHEIVYAAAGLRNPIVMANANRALSAPLSIWNDQQDSI 124
Query: 126 SQRDTGWIQFYAENNQEALDLILLAYKVAEDERVLLPAMVGFDAFILTHTVEPVEIPDQE 185
++RD+GW+Q Y E+ QEALD +LL+Y+V+ED VLLP+MV D FILTHTVEPV+IP QE
Sbjct: 125 AERDSGWMQIYVESGQEALDSVLLSYRVSEDRDVLLPSMVCLDGFILTHTVEPVDIPSQE 184
Query: 186 VVDEFLGEYEPKHAYLDPKRPITQGTLAFPAHYMEARYLVWEAMENARKVIDEAFAEFEK 245
VD FL E++P+ LDP P++ GT P +YMEARY V +AME +RK+I+ A EF +
Sbjct: 185 DVDSFLPEFQPQ-VMLDPDEPMSLGTFTDPDYYMEARYEVEKAMERSRKIIERACREFSE 243
Query: 246 KFGRKYQKIEEYRTDDAEIIFVTMGSLAGTLKDWVDKKREEGYKVGAAKMTVYRPFPVEE 305
FGR+Y +EEYR +DAEII V MGS+ TL++ +D+ R++G VG K+ V+RPFP EE
Sbjct: 244 MFGREYGLVEEYRCEDAEIILVAMGSVCSTLREVIDELRDKGKAVGLLKVRVHRPFPAEE 303
Query: 306 IRELAKKTKVLAFIEKDISMGLYGAVFTDASAALINESEKPLMLDFIAGLGGRDVTFNQL 365
I+ + +A ++K+I+ + GA++T+ SA L + + FI GLGGRD+T +
Sbjct: 304 IKSAVRNASKVAVLDKNITFSVGGALYTEISALLRDRE----VYGFIVGLGGRDITPAHI 359
Query: 366 DEALSIAKEALEKGKVEKPIHWIGLRKE 393
+E + + E+ + WIGL++E
Sbjct: 360 EEIVRRTENP------ERSVTWIGLKEE 381
>sp|Q57715|PORA_METJA PYRUVATE SYNTHASE SUBUNIT PORA (PYRUVATE OXIDOREDUCTASE ALPHA
CHAIN) (POR) (PYRUVIC-FERREDOXIN OXIDOREDUCTASE ALPHA
SUBUNIT) >gi|2127892|pir||D64333 pyruvate synthase (EC
1.2.7.1) alpha chain - Methanococcus jannaschii
>gi|1590995|gb|AAB98254.1| (U67482) pyruvate ferredoxin
oxidoreductase, subunit alpha (porA) [Methanococcus
jannaschii]
Length = 389
Score = 411 bits (1045), Expect = e-114
Identities = 214/390 (54%), Positives = 279/390 (70%), Gaps = 12/390 (3%)
Query: 6 VMKANEAAAWAAKLAKPKVIAAFPITPSTLVPEKISEFVANGELDAEFIKVESEHSAISA 65
V+ AAA AAKLA VIAA+PITP T EK++EFVANGELDAE+IKVESEHSA+SA
Sbjct: 9 VITGTSAAAEAAKLADVDVIAAYPITPQTTCVEKLAEFVANGELDAEYIKVESEHSAMSA 68
Query: 66 LVGASAAGVRTFTATASQGLALMHEVLFIAAGMRLPIVMAIGNRALSAPINIWNDWQDTI 125
+GA+A G RTFTATASQGLALMHE+LFIA+GMRLPIVM + NRALSAPINIWND QD+I
Sbjct: 69 CIGAAATGARTFTATASQGLALMHEMLFIASGMRLPIVMMVANRALSAPINIWNDHQDSI 128
Query: 126 SQRDTGWIQFYAENNQEALDLILLAYKVAEDERVLLPAMVGFDAFILTHTVEPVEIPDQE 185
++RD+GWIQ Y E+NQE LD I+ AYK+AE+E VLLP MV D FILTHTVEPV IP E
Sbjct: 129 AERDSGWIQIYVEDNQETLDSIIQAYKIAENEDVLLPVMVCLDGFILTHTVEPVTIPKAE 188
Query: 186 VVDEFLGEYEPKHAYLDPKRPITQGTLAFPAHYMEARYLVWEAMENARKVIDEAFAEFEK 245
V EFLG YEPKHAYLDP RPITQG + P YME R + EAME A+KVI + EF +
Sbjct: 189 RVREFLGVYEPKHAYLDPDRPITQGPVGVPDCYMETRKQIEEAMERAKKVIRDVNEEFAE 248
Query: 246 KFGRKYQK--IEEYRTDDAEIIFVTMGSLAGTLKDWVDKKREEGYKVGAAKMTVYRPFPV 303
F RKY +E Y D+A+ + V MGS+ GT+K +D+ ++EG VG ++ +RPFP
Sbjct: 249 WFKRKYGNGLVEAYNLDNADTVLVAMGSVCGTIKYVIDELKKEGKNVGLLRIRAFRPFPK 308
Query: 304 EEIRELAKKTKVLAFIEKDISMGL-YGAVFTDASAALINESEKPLMLDFIAGLGGRDVTF 362
E+++EL K +A ++K+IS+G GA+ + ++ L N+ + ++I GLGGRD+
Sbjct: 309 EDVKELLKDANNIAVLDKNISLGFNKGALGIEMASILKNKK----VCNYIVGLGGRDIKI 364
Query: 363 NQLDEALSIAKEALEKGKVEKPIHWIGLRK 392
+ + ++ ++A + + W+GL++
Sbjct: 365 DDIKTIINHVEKAEDDSTL-----WVGLKE 389
>sp|Q51801|VORA_PYRFU KETOISOVALERATE OXIDOREDUCTASE SUBUNIT VORA (VOR) (2-OXOISOVALERATE
OXIDOREDUCTASE ALPHA CHAIN) (2-OXOISOVALERATE-FERREDOXIN
OXIDOREDUCTASE ALPHA SUBUNIT) >gi|11280154|pir||T45085
2-oxoisovalerate--ferredoxin oxidoreductase (EC 1.2.7.-)
alpha chain vorA - Pyrococcus furiosus
>gi|1197360|emb|CAA59502.1| (X85250) 2-ketovalerate
ferredoxin oxidoreductase alpha-2 [Pyrococcus furiosus]
Length = 394
Score = 392 bits (997), Expect = e-108
Identities = 206/392 (52%), Positives = 275/392 (69%), Gaps = 3/392 (0%)
Query: 2 PIRTVMKANEAAAWAAKLAKPKVIAAFPITPSTLVPEKISEFVANGELDAEFIKVESEHS 61
PIR V+ N AAA+AA A+ +V+AA+PITP T + EKI+EF+ANGE D ++I VESEHS
Sbjct: 5 PIRKVVSGNYAAAYAALHARVQVVAAYPITPQTSIIEKIAEFIANGEADIQYIPVESEHS 64
Query: 62 AISALVGASAAGVRTFTATASQGLALMHEVLFIAAGMRLPIVMAIGNRALSAPINIWNDW 121
A++A +GASA G RTFTAT++QGLALMHE+L AAG RLPIVM NRA++ P ++W+D
Sbjct: 65 AMAACIGASATGARTFTATSAQGLALMHEMLHWAAGARLPIVMVDVNRAMAPPWSVWDDQ 124
Query: 122 QDTISQRDTGWIQFYAENNQEALDLILLAYKVAEDERVLLPAMVGFDAFILTHTVEPVEI 181
D++SQRDTGW+QFYAENNQE D +L+AYKVA E V +PAMV AFIL+HT + VE+
Sbjct: 125 TDSLSQRDTGWMQFYAENNQEVYDGVLMAYKVA--ETVNVPAMVVESAFILSHTYDVVEM 182
Query: 182 PDQEVVDEFLGEYEPKHAYLDPKRPITQGTLAFPAHYMEARYLVWEAMENARKVIDEAFA 241
QE+VDEFL +P ++ + PI G LA P Y E RY + +A E A+KVI E
Sbjct: 183 IPQELVDEFLPPRKPLYSLANFDEPIAVGALATPNDYYEFRYKLAKAHEEAKKVIKEVGK 242
Query: 242 EFEKKFGRKY-QKIEEYRTDDAEIIFVTMGSLAGTLKDWVDKKREEGYKVGAAKMTVYRP 300
EF ++FGR Y Q IE DDA+ +F+ MGSL GT+K+ VD R+EGYKVG AK+ +RP
Sbjct: 243 EFGERFGRDYSQMIETGYIDDADFVFMGMGSLMGTVKEAVDLLRKEGYKVGYAKVRWFRP 302
Query: 301 FPVEEIRELAKKTKVLAFIEKDISMGLYGAVFTDASAALINESEKPLMLDFIAGLGGRDV 360
FP EE+ E+A+ K +A ++++ S G G +FT++ AL N S PLM ++I GLGGRDV
Sbjct: 303 FPKEELVEIAESVKGIAVLDRNFSFGQEGILFTESKGALYNSSAHPLMKNYIVGLGGRDV 362
Query: 361 TFNQLDEALSIAKEALEKGKVEKPIHWIGLRK 392
T + K+ +E GKV+K + W L++
Sbjct: 363 TVKDIKAIADDMKKVIESGKVDKEVVWYHLKR 394
>pir||A71114 probable ferredoxin oxidoreductase alpha subunit - Pyrococcus
horikoshii >gi|3257088|dbj|BAA29771.1| (AP000003) 397aa
long hypothetical ferredoxin oxidoreductase alpha
subunit [Pyrococcus horikoshii]
Length = 397
Score = 388 bits (986), Expect = e-107
Identities = 201/392 (51%), Positives = 271/392 (68%), Gaps = 3/392 (0%)
Query: 2 PIRTVMKANEAAAWAAKLAKPKVIAAFPITPSTLVPEKISEFVANGELDAEFIKVESEHS 61
PI+ V+ N AAA+AA A+ +V+AA+PITP T + EKI+EF+ANGE D ++I VESEHS
Sbjct: 8 PIKKVVSGNYAAAYAALHARVQVVAAYPITPQTSIIEKIAEFIANGEADIQYIPVESEHS 67
Query: 62 AISALVGASAAGVRTFTATASQGLALMHEVLFIAAGMRLPIVMAIGNRALSAPINIWNDW 121
A++A +GASA G R FTAT++QGLALMHE+L AAG RLPIVM NRA++ P ++W+D
Sbjct: 68 AMAACIGASATGARVFTATSAQGLALMHEMLHWAAGSRLPIVMVNVNRAMAPPWSVWDDQ 127
Query: 122 QDTISQRDTGWIQFYAENNQEALDLILLAYKVAEDERVLLPAMVGFDAFILTHTVEPVEI 181
D++SQRDTGW+QFYAENNQE D +L+AYKVA E V +P M+ AFIL+HT E V +
Sbjct: 128 TDSLSQRDTGWMQFYAENNQEVYDGVLMAYKVA--ETVNIPTMIIESAFILSHTYEVVNM 185
Query: 182 PDQEVVDEFLGEYEPKHAYLDPKRPITQGTLAFPAHYMEARYLVWEAMENARKVIDEAFA 241
QE+VDEFL +P + D + PI G LA PA Y E RY + +A E A+KVI
Sbjct: 186 IPQELVDEFLPPRKPLYTLTDFENPIAVGALATPADYYEFRYKIAKAHEEAKKVIKSVGK 245
Query: 242 EFEKKFGRKYQK-IEEYRTDDAEIIFVTMGSLAGTLKDWVDKKREEGYKVGAAKMTVYRP 300
EF ++FGR Y K IE +DA+ +F+ MGSL GT+K+ VD R+EGYKVG AK+ +RP
Sbjct: 246 EFGERFGRDYSKMIETGYIEDADFVFMGMGSLMGTVKEAVDLLRKEGYKVGYAKVRWFRP 305
Query: 301 FPVEEIRELAKKTKVLAFIEKDISMGLYGAVFTDASAALINESEKPLMLDFIAGLGGRDV 360
FP EE+ E+A+ K +A ++++ S G G +FT+A AL N +P+M D+I GLGGRD
Sbjct: 306 FPKEELLEIAESVKGIAVLDRNFSFGQEGILFTEAKGALYNTGVRPIMKDYIVGLGGRDF 365
Query: 361 TFNQLDEALSIAKEALEKGKVEKPIHWIGLRK 392
T + K+ +E GK++K I W L++
Sbjct: 366 TVRDVKAIAEDMKKVVESGKLDKEIEWYHLKR 397
>sp|O58413|VORA_PYRHO KETOISOVALERATE OXIDOREDUCTASE SUBUNIT VORA (VOR) (2-OXOISOVALERATE
OXIDOREDUCTASE ALPHA CHAIN) (2-OXOISOVALERATE-FERREDOXIN
OXIDOREDUCTASE ALPHA SUBUNIT)
Length = 394
Score = 388 bits (986), Expect = e-107
Identities = 201/392 (51%), Positives = 271/392 (68%), Gaps = 3/392 (0%)
Query: 2 PIRTVMKANEAAAWAAKLAKPKVIAAFPITPSTLVPEKISEFVANGELDAEFIKVESEHS 61
PI+ V+ N AAA+AA A+ +V+AA+PITP T + EKI+EF+ANGE D ++I VESEHS
Sbjct: 5 PIKKVVSGNYAAAYAALHARVQVVAAYPITPQTSIIEKIAEFIANGEADIQYIPVESEHS 64
Query: 62 AISALVGASAAGVRTFTATASQGLALMHEVLFIAAGMRLPIVMAIGNRALSAPINIWNDW 121
A++A +GASA G R FTAT++QGLALMHE+L AAG RLPIVM NRA++ P ++W+D
Sbjct: 65 AMAACIGASATGARVFTATSAQGLALMHEMLHWAAGSRLPIVMVNVNRAMAPPWSVWDDQ 124
Query: 122 QDTISQRDTGWIQFYAENNQEALDLILLAYKVAEDERVLLPAMVGFDAFILTHTVEPVEI 181
D++SQRDTGW+QFYAENNQE D +L+AYKVA E V +P M+ AFIL+HT E V +
Sbjct: 125 TDSLSQRDTGWMQFYAENNQEVYDGVLMAYKVA--ETVNIPTMIIESAFILSHTYEVVNM 182
Query: 182 PDQEVVDEFLGEYEPKHAYLDPKRPITQGTLAFPAHYMEARYLVWEAMENARKVIDEAFA 241
QE+VDEFL +P + D + PI G LA PA Y E RY + +A E A+KVI
Sbjct: 183 IPQELVDEFLPPRKPLYTLTDFENPIAVGALATPADYYEFRYKIAKAHEEAKKVIKSVGK 242
Query: 242 EFEKKFGRKYQK-IEEYRTDDAEIIFVTMGSLAGTLKDWVDKKREEGYKVGAAKMTVYRP 300
EF ++FGR Y K IE +DA+ +F+ MGSL GT+K+ VD R+EGYKVG AK+ +RP
Sbjct: 243 EFGERFGRDYSKMIETGYIEDADFVFMGMGSLMGTVKEAVDLLRKEGYKVGYAKVRWFRP 302
Query: 301 FPVEEIRELAKKTKVLAFIEKDISMGLYGAVFTDASAALINESEKPLMLDFIAGLGGRDV 360
FP EE+ E+A+ K +A ++++ S G G +FT+A AL N +P+M D+I GLGGRD
Sbjct: 303 FPKEELLEIAESVKGIAVLDRNFSFGQEGILFTEAKGALYNTGVRPIMKDYIVGLGGRDF 362
Query: 361 TFNQLDEALSIAKEALEKGKVEKPIHWIGLRK 392
T + K+ +E GK++K I W L++
Sbjct: 363 TVRDVKAIAEDMKKVVESGKLDKEIEWYHLKR 394
>pir||B75047 probable 2-oxoisovalerate--ferredoxin oxidoreductase (EC 1.2.7.-)
alpha chain PAB1472 [similarity] - Pyrococcus abyssi
(strain Orsay) >gi|5458784|emb|CAB50271.1| (AJ248287)
KETOISOVALERATE OXIDOREDUCTASE SUBUNIT VORA (EC 1.-.-.-)
(VOR) [Pyrococcus abyssi]
Length = 395
Score = 383 bits (972), Expect = e-105
Identities = 196/392 (50%), Positives = 274/392 (69%), Gaps = 3/392 (0%)
Query: 2 PIRTVMKANEAAAWAAKLAKPKVIAAFPITPSTLVPEKISEFVANGELDAEFIKVESEHS 61
PI+ V+ N AAA+A A+ +V+AA+PITP T + EKI+EF+ANGE D ++I VESEHS
Sbjct: 6 PIKKVVSGNYAAAYAVLHARVQVVAAYPITPQTSIIEKIAEFIANGEADIQYIPVESEHS 65
Query: 62 AISALVGASAAGVRTFTATASQGLALMHEVLFIAAGMRLPIVMAIGNRALSAPINIWNDW 121
A++A +GASA G R FTAT++QGLALMHE+L AAG RLPIVM NRA++ P ++W+D
Sbjct: 66 AMAACIGASATGARVFTATSAQGLALMHEMLHWAAGARLPIVMVDVNRAMAPPWSVWDDQ 125
Query: 122 QDTISQRDTGWIQFYAENNQEALDLILLAYKVAEDERVLLPAMVGFDAFILTHTVEPVEI 181
D++SQRDTGW+QFYAENNQE D +L+A+KVA E V +PAMV AFIL+HT E V +
Sbjct: 126 TDSLSQRDTGWMQFYAENNQEVYDGVLMAFKVA--ETVNVPAMVVESAFILSHTYEIVNM 183
Query: 182 PDQEVVDEFLGEYEPKHAYLDPKRPITQGTLAFPAHYMEARYLVWEAMENARKVIDEAFA 241
QE+VDEFL +P ++ D + PI G LA PA Y E RY + A E A+KVI +
Sbjct: 184 IPQELVDEFLPPRKPLYSLADFENPIAVGALATPADYYEFRYKLARAHEEAKKVIKDVGR 243
Query: 242 EFEKKFGRKY-QKIEEYRTDDAEIIFVTMGSLAGTLKDWVDKKREEGYKVGAAKMTVYRP 300
EF ++FGR Y + IE+ DDA+ +F+ MGSL GT+K+ V+ R++GYKVG AK+ +RP
Sbjct: 244 EFGERFGRDYSEMIEKAYIDDADFVFMGMGSLMGTVKEAVELLRKQGYKVGYAKVRWFRP 303
Query: 301 FPVEEIRELAKKTKVLAFIEKDISMGLYGAVFTDASAALINESEKPLMLDFIAGLGGRDV 360
FP EE+ E+A+ K +A ++++ S G G +FT+A AL N +P+M ++I GLGGRD
Sbjct: 304 FPREELLEIAESVKGIAVLDRNFSFGQEGILFTEAKGALYNNGARPIMKNYIVGLGGRDF 363
Query: 361 TFNQLDEALSIAKEALEKGKVEKPIHWIGLRK 392
T + + K+ +E GK+++ + W L++
Sbjct: 364 TVSDVKAIAEDMKKVIESGKLDREVEWYHLKR 395
>emb|CAA59457.1| (X85171) alpha subunit of pyruvate ferredoxin oxidoreductase
[Thermotoga maritima]
>gi|4980501|gb|AAD35111.1|AE001690_5 (AE001690) pyruvate
ferredoxin oxidoreductase, alpha subunit [Thermotoga
maritima]
Length = 394
Score = 340 bits (863), Expect = 2e-92
Identities = 176/389 (45%), Positives = 251/389 (64%), Gaps = 3/389 (0%)
Query: 4 RTVMKANEAAAWAAKLAKPKVIAAFPITPSTLVPEKISEFVANGELDAEFIKVESEHSAI 63
R + EA A A + +P V+AA+PITP T + E + FVA+G + E I VESEHSA+
Sbjct: 9 RVAVTGAEAVANAMRQIEPDVVAAYPITPQTPIVEYFARFVADGVVRTEMIPVESEHSAM 68
Query: 64 SALVGASAAGVRTFTATASQGLALMHEVLFIAAGMRLPIVMAIGNRALSAPINIWNDWQD 123
SA+VGA+AAG R TAT++ GLALMHE+++IAA RLPIVM + NRALS PINI D D
Sbjct: 69 SAVVGAAAAGARAMTATSANGLALMHEIVYIAASYRLPIVMPVVNRALSGPINIHCDHSD 128
Query: 124 TISQRDTGWIQFYAENNQEALDLILLAYKVAEDERVLLPAMVGFDAFILTHTVEPVEIPD 183
+++RD+GWIQ +AE NQEA D +LA ++AE E V LP MV D FIL+H VEPVE
Sbjct: 129 AMAERDSGWIQLFAETNQEAYDFTILAVRLAEHEDVRLPVMVNLDGFILSHGVEPVEFYP 188
Query: 184 QEVVDEFLGEYEPKHAYLDPKRPITQGTLAFPAHYMEARYLVWEAMENARKVIDEAFAEF 243
E+V +F+GE +P + LD + P+T G L +Y E + EAMEN +KV E EF
Sbjct: 189 DELVKKFVGELKPMYPLLDTEHPVTWGPLDLYDYYFEHKRQQIEAMENVKKVFPEIAKEF 248
Query: 244 EKKFGRKYQKIEEYRTDDAEIIFVTMGSLAGTLKDWVDKKREEGYKVGAAKMTVYRPFPV 303
E+ FGRKY +E YR +DAE + V +GS T+K VD+ REEGYKVG+ K+ ++RPFP
Sbjct: 249 EETFGRKYWFVEPYRMEDAEHVMVALGSTNSTIKYVVDELREEGYKVGSLKIWMFRPFPK 308
Query: 304 EEIRELAKKTKVLAFIEKDISMGLYGAVFTDASAALINESEKPLMLDFIAGLGGRDVTFN 363
E+++EL K + +++ +S G ++ +AL + +P++ ++ GLGGRD+
Sbjct: 309 EQLQELLNGRKSVVVLDRAVSFGAEAPLYEAVKSALYEVAARPMLGSYVYGLGGRDIKPE 368
Query: 364 QLDEALSIAKEALEKGKVEKPIHWIGLRK 392
+ +A ++A+ + ++GLR+
Sbjct: 369 HIRKAF---EDAINGNLIADEQRYLGLRE 394
>sp|O05651|PORA_THEMA PYRUVATE SYNTHASE SUBUNIT PORA (PYRUVATE OXIDOREDUCTASE ALPHA
CHAIN) (POR) (PYRUVIC-FERREDOXIN OXIDOREDUCTASE ALPHA
SUBUNIT) >gi|7449946|pir||C72427 pyruvate synthase (EC
1.2.7.1) alpha chain - Thermotoga maritima (strain MSB8)
Length = 392
Score = 340 bits (863), Expect = 2e-92
Identities = 176/389 (45%), Positives = 251/389 (64%), Gaps = 3/389 (0%)
Query: 4 RTVMKANEAAAWAAKLAKPKVIAAFPITPSTLVPEKISEFVANGELDAEFIKVESEHSAI 63
R + EA A A + +P V+AA+PITP T + E + FVA+G + E I VESEHSA+
Sbjct: 7 RVAVTGAEAVANAMRQIEPDVVAAYPITPQTPIVEYFARFVADGVVRTEMIPVESEHSAM 66
Query: 64 SALVGASAAGVRTFTATASQGLALMHEVLFIAAGMRLPIVMAIGNRALSAPINIWNDWQD 123
SA+VGA+AAG R TAT++ GLALMHE+++IAA RLPIVM + NRALS PINI D D
Sbjct: 67 SAVVGAAAAGARAMTATSANGLALMHEIVYIAASYRLPIVMPVVNRALSGPINIHCDHSD 126
Query: 124 TISQRDTGWIQFYAENNQEALDLILLAYKVAEDERVLLPAMVGFDAFILTHTVEPVEIPD 183
+++RD+GWIQ +AE NQEA D +LA ++AE E V LP MV D FIL+H VEPVE
Sbjct: 127 AMAERDSGWIQLFAETNQEAYDFTILAVRLAEHEDVRLPVMVNLDGFILSHGVEPVEFYP 186
Query: 184 QEVVDEFLGEYEPKHAYLDPKRPITQGTLAFPAHYMEARYLVWEAMENARKVIDEAFAEF 243
E+V +F+GE +P + LD + P+T G L +Y E + EAMEN +KV E EF
Sbjct: 187 DELVKKFVGELKPMYPLLDTEHPVTWGPLDLYDYYFEHKRQQIEAMENVKKVFPEIAKEF 246
Query: 244 EKKFGRKYQKIEEYRTDDAEIIFVTMGSLAGTLKDWVDKKREEGYKVGAAKMTVYRPFPV 303
E+ FGRKY +E YR +DAE + V +GS T+K VD+ REEGYKVG+ K+ ++RPFP
Sbjct: 247 EETFGRKYWFVEPYRMEDAEHVMVALGSTNSTIKYVVDELREEGYKVGSLKIWMFRPFPK 306
Query: 304 EEIRELAKKTKVLAFIEKDISMGLYGAVFTDASAALINESEKPLMLDFIAGLGGRDVTFN 363
E+++EL K + +++ +S G ++ +AL + +P++ ++ GLGGRD+
Sbjct: 307 EQLQELLNGRKSVVVLDRAVSFGAEAPLYEAVKSALYEVAARPMLGSYVYGLGGRDIKPE 366
Query: 364 QLDEALSIAKEALEKGKVEKPIHWIGLRK 392
+ +A ++A+ + ++GLR+
Sbjct: 367 HIRKAF---EDAINGNLIADEQRYLGLRE 392
>emb|CAC11767.1| (AL445064) probable 2-ketovalerate ferredoxin oxidoreductase
alpha-2 chain [Thermoplasma acidophilum]
Length = 402
Score = 326 bits (827), Expect = 3e-88
Identities = 171/391 (43%), Positives = 254/391 (64%), Gaps = 10/391 (2%)
Query: 4 RTVMKANEAAAWAAKLAKPKVIAAFPITPSTLVPEKISEFVANGELDAEFIKVESEHSAI 63
RT+M N+A A+ AKLA+ K I+A+PITP T + EK++ +AN ELDA++++VESEHSA+
Sbjct: 18 RTIMTGNDAVAYGAKLARVKFISAYPITPQTTIVEKLASMIANDELDAKYVEVESEHSAL 77
Query: 64 SALVGASAAGVRTFTATASQGLALMHEVLFIAAGMRLPIVMAIGNRALSAPINIWNDWQD 123
+A+ + GVR++TAT+S GL MHE+L AG RLPIVM++ NRA+ P NIW D D
Sbjct: 78 AAVFASELTGVRSYTATSSHGLLYMHEMLHWVAGQRLPIVMSVVNRAIGPPWNIWADQSD 137
Query: 124 TISQRDTGWIQFYAENNQEALDLILLAYKVAEDERVLLPAMVGFDAFILTHTVEPVEIPD 183
TI+QRDTGW+Q Y+E+NQEA+D I++ YK+AE+ V+LP M DAFIL+HT EPV + D
Sbjct: 138 TINQRDTGWMQVYSESNQEAMDTIIMGYKIAENSGVMLPLMSMEDAFILSHTSEPVTMRD 197
Query: 184 QEVVDEFLGEYEPKHAYLDPKRPITQGTLAFP-AHYMEARYLVWEAMENARKVIDEAFAE 242
Q++V+E+L + + K +DP+ P+ G+ P +ME + + ++M NARKVI E +
Sbjct: 198 QDLVNEYLPDLDLKFR-IDPENPMGYGSYDTPDGSFMEFKKDMIDSMNNARKVIKEETQK 256
Query: 243 FEKKFGRKY-QKIEEYRTDDAEIIFVTMGSLAGTLKDWVDKKREEGYKVGAAKMTVYRPF 301
F + F Y IE YR DDA+ + MG++A T + +D+ RE G +G ++ +RPF
Sbjct: 257 FNEMFETNYGALIERYRMDDADYAIIAMGTVASTARFVIDRLRENGLNIGLIRIRYFRPF 316
Query: 302 PVEEIRELAKKTKVLAFIEKDISMGLYGAVFTDASAALINESEKPLMLDFIAGLGGRDVT 361
P +EI E K K I++ +S GL G +++ + L P+ FI G+GGRDV
Sbjct: 317 PYDEILEDLKNVKSAGVIDRSVSFGLAGVTYSEVISGLYGRINIPVS-SFIVGIGGRDV- 374
Query: 362 FNQLDEALSIAKEALEKGKVEKPIHWIGLRK 392
++++ SIA E + G HWI +++
Sbjct: 375 --RIEDIESIA-ETIRNGST--GTHWINVKR 400
>gi|11499291 pyruvate ferredoxin oxidoreductase, subunit alpha (porA)
[Archaeoglobus fulgidus] >gi|7449947|pir||D69462
pyruvate synthase (EC 1.2.7.1) alpha chain -
Archaeoglobus fulgidus >gi|2648853|gb|AAB89548.1|
(AE000986) pyruvate ferredoxin oxidoreductase, subunit
alpha (porA) [Archaeoglobus fulgidus]
Length = 391
Score = 322 bits (816), Expect = 5e-87
Identities = 178/377 (47%), Positives = 239/377 (63%), Gaps = 3/377 (0%)
Query: 3 IRTVMKANEAAAWAAKLAKPKVIAAFPITPSTLVPEKISEFVANGEL-DAEFIKVESEHS 61
+R V++ + A++ KL KP VI A+PITP T + E ++ ANGEL DAE+I ESE
Sbjct: 1 MRKVVRGFYSVAYSVKLCKPNVICAYPITPQTEIVENLAAMYANGELGDAEYITAESEFG 60
Query: 62 AISALVGASAAGVRTFTATASQGLALMHEVLFIAAGMRLPIVMAIGNRALSAPINIWNDW 121
A S LVGASAAG R FTAT SQGL LM EVLF AAGMRLPIV+ NRALSAP++IWND
Sbjct: 61 AASMLVGASAAGARVFTATCSQGLILMSEVLFNAAGMRLPIVLVNTNRALSAPLSIWNDH 120
Query: 122 QDTISQRDTGWIQFYAENNQEALDLILLAYKVAEDERVLLPAMVGFDAFILTHTVEPVEI 181
QD+++ RD G +Q Y ENNQEA D+I AYKVAE+ +VLLP M+ D + LTH EPV++
Sbjct: 121 QDSMAMRDAGIMQVYVENNQEAHDMIPQAYKVAENRKVLLPFMICMDGYKLTHAYEPVDL 180
Query: 182 PDQEVVDEFLGEYEPKHAYLDPKRPITQGTLAFPAHYMEARYLVWEAMENARKVIDEAFA 241
+QE VD FL YEP AY+ K+P+ G A P YME R + +AME ARK++ + F
Sbjct: 181 LEQETVDSFLPPYEPA-AYMTTKKPLAFGCYAPPHVYMEFRVAMQQAMERARKIMLDVFK 239
Query: 242 EFEKKFGRKYQKIEEYRTDDAEIIFVTMGSLAGTLKDWVDKKREEGYKVGAAKMTVYRPF 301
E+ + GR + D++I V MGS+ G L+ V++ R EG VG K+ +RPF
Sbjct: 240 EWGELTGRDWGGHITVDFPDSKIFVVAMGSVVGLLRKVVEELRGEGLSVGLIKIRTFRPF 299
Query: 302 PVEEIRELAKKTKVLAFIEKDISMGLYGAVFTDASAALINESEKPLMLDFIAGLGGRDVT 361
PVEE+RE K + + +++ +S G G V + +A+ S + F GLGGRD+
Sbjct: 300 PVEELREALKDAEKVIVLDRSVSFGYEGPVSIELKSAIYGHSSAEI-YSFAVGLGGRDMP 358
Query: 362 FNQLDEALSIAKEALEK 378
+ L++ + E EK
Sbjct: 359 KDFLEKIIRDVAEGREK 375
>gb|AAK41454.1| Pyruvate synthase alpha chain (Pyruvic-ferredoxin oxidoreductase
alpha chain) (porA-1) [Sulfolobus solfataricus]
Length = 385
Score = 308 bits (781), Expect = 6e-83
Identities = 160/352 (45%), Positives = 232/352 (65%), Gaps = 5/352 (1%)
Query: 10 NEAAAWAAKLAKPKVIAAFPITPSTLVPEKISEFVANGELDAEFIKVESEHSAISALVGA 69
N A A+A K AKPKV+A FPITP T + EK+SE++++ EL AE IKVESEHSA++++ GA
Sbjct: 14 NHAVAYAVKQAKPKVLAVFPITPQTTMLEKLSEYISSEELKAELIKVESEHSALASIYGA 73
Query: 70 SAAGVRTFTATASQGLALMHEVLFIAAGMRLPIVMAIGNRALSAPINIWNDWQDTISQRD 129
+ AG R FTAT+SQGL M E+++ A G R+PIV A+ RA++ P +IW+D QD +S+RD
Sbjct: 74 ALAGARVFTATSSQGLLYMTEMIYWAGGQRVPIVAAVATRAIAEPWSIWDDHQDFVSKRD 133
Query: 130 TGWIQFYAENNQEALDLILLAYKVAEDERVLLPAMVGFDAFILTHTVEPVEIPDQEVVDE 189
WIQ AEN QEA D+ + A++++EDERV+LP M+GFD FILTHT+E +E+ + VD
Sbjct: 134 AIWIQIMAENVQEAYDMTIQAFRISEDERVILPVMMGFDGFILTHTMERIEVLEDNEVDN 193
Query: 190 FLGEYEPKHAYLDPKRPITQGTLAFPAHYMEARYLVWEAMENARKVIDEAFAEFEKKFGR 249
FL + +D PI G +A P Y++ RY +AME A+ VI+E E+E+ GR
Sbjct: 194 FLPPRQ--FNLIDFSDPIAIGPIATPEEYIKYRYEAMKAMERAKGVIEEIMGEYERISGR 251
Query: 250 K-YQKIEEYRTDDAEIIFVTMGSLAGTLKDWVDKKREEGYKVGAAKMTVYRPFPVEEIRE 308
K + +E Y+ +DA+ +FVTMG+ +G K VD+ R+ G K G K+ V+RPFP E++ E
Sbjct: 252 KQHGLVECYKCEDAKYVFVTMGAWSGDGKAAVDRLRDSGVKTGLLKIRVFRPFPKEKVEE 311
Query: 309 LAKKTKVLAFIEKDISMGLYGAVFTDASAALINESEKPLMLDFIAGLGGRDV 360
+ K + ++ S G G + + AAL + + +AG+GG+DV
Sbjct: 312 YLRSMKGVVVFDRAYSYGYGGILVNEIKAALY--GYRVPVYSVVAGIGGKDV 361
>gb|AAK42867.1| Pyruvate synthase alpha chain (Pyruvic-ferredoxin oxidoreductase
alpha chain) (porA-2) [Sulfolobus solfataricus]
Length = 400
Score = 282 bits (714), Expect = 5e-75
Identities = 154/367 (41%), Positives = 220/367 (58%), Gaps = 7/367 (1%)
Query: 3 IRTVMKANEAAAWAAKLAKPKVIAAFPITPSTLVPEKISEFVANGELDAEFIKVESEHSA 62
IR ++ NEA A KLA+ V +PITP T + EK++E A GE++ E ++VESEHSA
Sbjct: 2 IRKIISGNEAVALGVKLARVGVTGIYPITPQTTIIEKLAEMRAKGEIETEIVRVESEHSA 61
Query: 63 ISALVGASAAGVRTFTATASQGLALMHEVLFIAAGMRLPIVMAIGNRALSAPINIWNDWQ 122
++A GA+ GVR FTATASQGL MHE+++ AG R+P+VM +G RA+ AP NIWN+
Sbjct: 62 MAATFGAALGGVRAFTATASQGLLYMHEMVWWVAGSRVPVVMVVGTRAVGAPWNIWNEHT 121
Query: 123 DTISQRDTGWIQFYAENNQEALDLILLAYKVAEDERVLLPAMVGFDAFILTHTVEPVEIP 182
D S+RD+GWI +A N QEALDL L A++++EDERV LP M+G D FIL+HT V IP
Sbjct: 122 DFTSERDSGWIMAFASNPQEALDLTLQAFRISEDERVFLPMMIGMDGFILSHTKTNVLIP 181
Query: 183 DQEVVDEFLGEYEPKHAYLDPKRPITQGTLAFPAHYMEARYLVWEAMENARKVIDEAFAE 242
DQ+ VD+FL + +DP+ P+ G + P YM R + A+ N+ VI E E
Sbjct: 182 DQDQVDDFLPPRRQPYV-IDPEDPVGMGNIFPPEGYMRLRESIDLALRNSEDVIKEIGRE 240
Query: 243 FEKKFG--RKYQKIE-EYRTDDAEIIFVTMGSLAGTLKDWVDKKREEGYKVGAAKMTVYR 299
+ KK Y + Y+ +DA+ V MG+ AG + VD RE+G K+G ++ R
Sbjct: 241 YNKKINPLGDYSTLNVSYKLEDADYAVVLMGAWAGDAMEAVDTLREKGIKIGMLRIRYLR 300
Query: 300 PFPVEEIRELAKKTKVLAFIEKDISMGLYGA-VFTDASAALINESEKPLMLDFIAGLGGR 358
P+ +EIR K K + +++ S G G ++ + + + N P + ++GLGG
Sbjct: 301 PWSEKEIRNTLKDKKAVLVLDRSTSFGRGGGPLYVEIKSTISN--VVPQIKGVVSGLGGV 358
Query: 359 DVTFNQL 365
V N L
Sbjct: 359 TVNKNDL 365
>pir||H71857 pyruvate ferrodoxin oxidoreductase - Helicobacter pylori (strain
J99) >gi|4155626|gb|AAD06616.1| (AE001531) Pyruvate
ferrodoxin oxidoreductase [Helicobacter pylori J99]
Length = 407
Score = 277 bits (700), Expect = 2e-73
Identities = 156/389 (40%), Positives = 232/389 (59%), Gaps = 3/389 (0%)
Query: 6 VMKANEAAAWAAKLAKPKVIAAFPITPSTLVPEKISEFVANGELDAEFIKVESEHSAISA 65
V N A++ A + A+ VIAA+PITPST + + F NG +D EF+ VESEH+A+SA
Sbjct: 12 VWDGNTASSNALRQAQIDVIAAYPITPSTPIVQNYGSFKDNGYVDGEFVLVESEHAAMSA 71
Query: 66 LVGASAAGVRTFTATASQGLALMHEVLFIAAGMRLPIVMAIGNRALSAPINIWNDWQDTI 125
VGA+AAG R TAT+SQGLALM EVL+ A+GMRLPIV+ + NRAL+AP+NI D D
Sbjct: 72 CVGAAAAGGRVSTATSSQGLALMVEVLYQASGMRLPIVLNLVNRALAAPLNIHGDHSDMY 131
Query: 126 SQRDTGWIQFYAENNQEALDLILLAYKVAEDERVLLPAMVGFDAFILTHTVEPVEIPDQE 185
RD+GWI N QEA D L+A+++AE ++V +P +V D F+ +HTV+ V
Sbjct: 132 LSRDSGWISLCTCNPQEAYDFTLMAFRIAEHQKVRVPTIVNQDGFLCSHTVQNVRPLSDA 191
Query: 186 VVDEFLGEYEPKHAYLDPKRPITQGTLAFPAHYMEARYLVWEAMENARKVIDEAFAEFEK 245
V +F+GEY+ KH+ LD +P++ G A + E + + A+ +A VI+E F +F K
Sbjct: 192 VAYQFVGEYQTKHSLLDFDKPVSYGAQAEEEWHYEHKAQLHHAIMSASSVIEEVFNDFAK 251
Query: 246 KFGRKYQKIEEYRTDDAEIIFVTMGSLAGTLKDWVDKKREEGYKVGAAKMTVYRPFPVEE 305
GR+Y + ++ +DAEI +G+ + + R++G K G A + RPFP E
Sbjct: 252 LTGRQYHLTKTFQLEDAEIAIFALGTTYESAIVAAKEMRKKGIKAGVATIHSLRPFPYER 311
Query: 306 IRELAKKTKVLAFIEKDISMGLYGAVFTDASAALINE--SEKPLMLDFIAGLGGRDVTFN 363
+ + K K LA ++K G GA+F + ++A+ ++ P++ ++I GLG RD+T
Sbjct: 312 LGQDLKNLKALAILDKSSPAGAMGAMFNEVTSAVYQTQGTKHPVVSNYIYGLGERDMTIV 371
Query: 364 QLDEALSIAKEALEKGKVEKPI-HWIGLR 391
L E E KG + P ++GLR
Sbjct: 372 HLCEIFEEINEDALKGTLTHPTQQFVGLR 400
>pir||F64658 pyruvate synthase (EC 1.2.7.1) alpha chain - Helicobacter pylori
(strain 26695) >gi|2314261|gb|AAD08154.1| (AE000617)
pyruvate ferredoxin oxidoreductase, alpha subunit
[Helicobacter pylori 26695]
Length = 407
Score = 275 bits (696), Expect = 6e-73
Identities = 155/388 (39%), Positives = 231/388 (58%), Gaps = 3/388 (0%)
Query: 6 VMKANEAAAWAAKLAKPKVIAAFPITPSTLVPEKISEFVANGELDAEFIKVESEHSAISA 65
V N A++ A + A+ VIAA+PITPST + + F NG +D EF+ VESEH+A+SA
Sbjct: 12 VWDGNTASSNALRQAQIDVIAAYPITPSTPIVQNYGSFKDNGYVDGEFVLVESEHAAMSA 71
Query: 66 LVGASAAGVRTFTATASQGLALMHEVLFIAAGMRLPIVMAIGNRALSAPINIWNDWQDTI 125
VGA+AAG R TAT+SQGLALM EVL+ A+GMRLPIV+ + NRAL+AP+NI D D
Sbjct: 72 CVGAAAAGGRVSTATSSQGLALMVEVLYQASGMRLPIVLNLVNRALAAPLNIHGDHSDMY 131
Query: 126 SQRDTGWIQFYAENNQEALDLILLAYKVAEDERVLLPAMVGFDAFILTHTVEPVEIPDQE 185
RD+GWI N QEA D L+A+++AE ++V +P +V D F+ +HTV+ V
Sbjct: 132 LSRDSGWISLCTCNPQEAYDFTLMAFRIAEHQKVRVPTIVNQDGFLCSHTVQNVRPLSDA 191
Query: 186 VVDEFLGEYEPKHAYLDPKRPITQGTLAFPAHYMEARYLVWEAMENARKVIDEAFAEFEK 245
V +F+GEY+ KH+ LD +P++ G A + E + + A+ +A VI+E F +F K
Sbjct: 192 VAYQFVGEYQTKHSLLDFDKPVSYGAQAEEEWHYEHKAQLHHAIMSASSVIEEVFNDFAK 251
Query: 246 KFGRKYQKIEEYRTDDAEIIFVTMGSLAGTLKDWVDKKREEGYKVGAAKMTVYRPFPVEE 305
GR+Y + ++ +DAEI +G+ + + R++G K G A + RPFP E
Sbjct: 252 LTGRQYHLTKTFQLEDAEIAIFALGTTYESAIVAAKEMRKKGIKAGVATIHSLRPFPYER 311
Query: 306 IRELAKKTKVLAFIEKDISMGLYGAVFTDASAALINE--SEKPLMLDFIAGLGGRDVTFN 363
+ + K K LA ++K G GA+F + ++A+ ++ P++ ++I GLG RD+T
Sbjct: 312 LGQDLKNLKALAILDKSSPAGTMGAMFNEVTSAVYQTQGTKHPVVSNYIYGLGERDMTIA 371
Query: 364 QLDEALSIAKEALEKGKVEKPI-HWIGL 390
L E E KG + P ++GL
Sbjct: 372 HLCEIFEEINEDALKGTLTHPTQQFVGL 399
>gb|AAC02293.1| (AF013980) pyruvate:ferredoxin oxidoreductase alpha subunit
[Helicobacter pylori]
Length = 396
Score = 273 bits (691), Expect = 2e-72
Identities = 152/375 (40%), Positives = 228/375 (60%), Gaps = 2/375 (0%)
Query: 6 VMKANEAAAWAAKLAKPKVIAAFPITPSTLVPEKISEFVANGELDAEFIKVESEHSAISA 65
V N A++ A + A+ VIAA+PITPST + + F NG +D EF+ VESEH+A+SA
Sbjct: 12 VWDGNTASSNALRQAQIDVIAAYPITPSTPIVQNYGSFKDNGYIDGEFVLVESEHAAMSA 71
Query: 66 LVGASAAGVRTFTATASQGLALMHEVLFIAAGMRLPIVMAIGNRALSAPINIWNDWQDTI 125
VGA+AAG R TAT+SQGLALM EVL+ A+GMRLPIV+ + NRAL+AP+NI D D
Sbjct: 72 CVGAAAAGGRVSTATSSQGLALMVEVLYQASGMRLPIVLNLVNRALAAPLNIHGDHSDMY 131
Query: 126 SQRDTGWIQFYAENNQEALDLILLAYKVAEDERVLLPAMVGFDAFILTHTVEPVEIPDQE 185
RD+GWI N QEA D L+A+K+AE ++V +P +V D F+ +HTV+ V
Sbjct: 132 LSRDSGWISLCTCNPQEAYDFTLMAFKIAEHQKVRVPTIVNQDGFLCSHTVQNVRPLSDA 191
Query: 186 VVDEFLGEYEPKHAYLDPKRPITQGTLAFPAHYMEARYLVWEAMENARKVIDEAFAEFEK 245
V +F+GEY+ KH+ LD +P++ G A + E + + A+ +A VI+E F +F K
Sbjct: 192 VAYQFVGEYQTKHSLLDFDKPVSYGAQAEEEWHYEHKAQLHHAIMSASSVIEEVFNDFAK 251
Query: 246 KFGRKYQKIEEYRTDDAEIIFVTMGSLAGTLKDWVDKKREEGYKVGAAKMTVYRPFPVEE 305
GR+Y + ++ +DAEI +G+ + + R++G K G A + RPFP E+
Sbjct: 252 LTGRQYHLTKTFQLEDAEIAIFALGTTYESAIVAAKEMRKKGIKAGVATIHSLRPFPYEK 311
Query: 306 IRELAKKTKVLAFIEKDISMGLYGAVFTDASAALINE--SEKPLMLDFIAGLGGRDVTFN 363
+ + K K LA ++K G GA+F + ++A+ ++ P++ ++I GLG RD+T
Sbjct: 312 LGQDLKNLKALAILDKSSPAGAMGAMFNEVTSAVYQTQGTKHPVVSNYIYGLGERDMTIA 371
Query: 364 QLDEALSIAKEALEK 378
L + L + + L K
Sbjct: 372 HLWKFLKKSMKTLLK 386
>gb|AAK42308.1| Pyruvate synthase alpha chain (Pyruvic-ferredoxin oxidoreductase
alpha chain) (porA-like) [Sulfolobus solfataricus]
Length = 415
Score = 264 bits (667), Expect = 2e-69
Identities = 145/400 (36%), Positives = 221/400 (55%), Gaps = 15/400 (3%)
Query: 6 VMKANEAAAWAAKLAKPKVIAAFPITPSTLVPEKISEFVANGELDAEFIKVESEHSAISA 65
+M +A A AA A V+AA+PI P T V + IS+ +A+GELDAEFI E EH
Sbjct: 13 LMNGTQAVAHAAMYADVDVVAAYPIRPYTEVMDTISKLIADGELDAEFIVAEGEHGQFET 72
Query: 66 LVGASAAGVRTFTATASQGLALMHEVLFIAAGMRLPIVMAIGNRALSAPINIWNDWQDTI 125
+ AS AG RT ++ G E + + A R P+V IGNRAL P + D +
Sbjct: 73 VKHASLAGARTLVGSSGVGWLYAMEAIVVTATDRAPVVAIIGNRALDDPGAYGVEHNDAL 132
Query: 126 SQRDTGWIQFYAENNQEALDLILLAYKVAEDERVLLPAMVGFDAFILTHTVEPVEIPDQE 185
RD GW+ + + QEA D LLAY++AED+RVLLP + D LTH+ + V +P +E
Sbjct: 133 MVRDVGWLLVWVDTAQEAFDTALLAYRIAEDQRVLLPLGISMDGGFLTHSEQIVRLPPRE 192
Query: 186 VVDEFLGEYEPKHAYLDPKRPITQGTLAFPAHYMEARYLVWEAMENARKVIDEAFAEFEK 245
+V FL Y + P PIT ME R EAME AR VI EA+ EF+K
Sbjct: 193 LVKNFLPPYNRGKYLVHPDNPITVAPQVNEDWVMEIRRQHEEAMERARSVIVEAYEEFKK 252
Query: 246 KFGR-----------KYQKIEEYRTDDAEIIFVTMGSLAGTLKDWVDKKREEGYKVGAAK 294
FGR + +E Y DDAE++ + MG+++ +K + R +GYKVG +
Sbjct: 253 VFGRYPGSTSDLQMPENPFVEPYMIDDAEVVLIGMGTVSKPMKVAIKNMRRQGYKVGMLR 312
Query: 295 MTVYRPFPVEEIRELAKKTKVLAFIEKDISMG---LYGAVFTDASAALINESEKPLMLDF 351
+ +RPFP +++ ++V+ I++D SMG G ++ + ++L + ++P +++F
Sbjct: 313 IRWFRPFPTQDVIRYLANSRVVCVIDRDYSMGSPNRGGVIYHEVRSSLYDLDQRPRVMNF 372
Query: 352 IAGLGGRDVTFNQLDEALSIAKEALEKGKVEKPIHWIGLR 391
I GLGGR++T +++ + I E + + KP++W+G+R
Sbjct: 373 IGGLGGREITIQDVEKIIKIGYEHRDT-PITKPVYWVGVR 411
>pir||S74041 pyruvate synthase (EC 1.2.7.1) alpha chain - Sulfolobus
solfataricus >gi|1707735|emb|CAA69455.1| (Y08256)
pyruvate-ferredoxin oxidoreductase alpha-2 [Sulfolobus
solfataricus]
Length = 415
Score = 264 bits (667), Expect = 2e-69
Identities = 145/400 (36%), Positives = 221/400 (55%), Gaps = 15/400 (3%)
Query: 6 VMKANEAAAWAAKLAKPKVIAAFPITPSTLVPEKISEFVANGELDAEFIKVESEHSAISA 65
+M +A A AA A V+AA+PI P T V + IS+ +A+GELDAEFI E EH
Sbjct: 13 LMNGTQAVAHAAMYADVDVVAAYPIRPYTEVMDTISKLIADGELDAEFIVAEGEHGQFET 72
Query: 66 LVGASAAGVRTFTATASQGLALMHEVLFIAAGMRLPIVMAIGNRALSAPINIWNDWQDTI 125
+ AS AG RT ++ G E + + A R P+V IGNRAL P + D +
Sbjct: 73 VKHASLAGARTLVGSSGVGWLYAMEAIVVTATDRAPVVAIIGNRALDDPGAYGVEHNDAL 132
Query: 126 SQRDTGWIQFYAENNQEALDLILLAYKVAEDERVLLPAMVGFDAFILTHTVEPVEIPDQE 185
RD GW+ + + QEA D LLAY++AED+RVLLP + D LTH+ + V +P +E
Sbjct: 133 MVRDVGWLLVWVDTAQEAFDTALLAYRIAEDQRVLLPLGISMDGGFLTHSEQIVRLPPRE 192
Query: 186 VVDEFLGEYEPKHAYLDPKRPITQGTLAFPAHYMEARYLVWEAMENARKVIDEAFAEFEK 245
+V FL Y + P PIT ME R EAME AR VI EA+ EF+K
Sbjct: 193 LVKNFLPPYNRGKYLVHPDNPITVAPQVNEDWVMEIRRQHEEAMERARSVIVEAYEEFKK 252
Query: 246 KFGR-----------KYQKIEEYRTDDAEIIFVTMGSLAGTLKDWVDKKREEGYKVGAAK 294
FGR + +E Y DDAE++ + MG+++ +K + R +GYKVG +
Sbjct: 253 VFGRYPGSTSDLQMPENPFVEPYMIDDAEVVLIGMGTVSKPMKVAIKNMRRQGYKVGMLR 312
Query: 295 MTVYRPFPVEEIRELAKKTKVLAFIEKDISMG---LYGAVFTDASAALINESEKPLMLDF 351
+ +RPFP +++ ++V+ I++D SMG G ++ + ++L + ++P +++F
Sbjct: 313 IRWFRPFPTQDVIRYLANSRVVCVIDRDYSMGSPNRGGVIYHEVRSSLYDLDQRPRVMNF 372
Query: 352 IAGLGGRDVTFNQLDEALSIAKEALEKGKVEKPIHWIGLR 391
I GLGGR++T +++ + I E + + KP++W+G+R
Sbjct: 373 IGGLGGREITIQDVEKIIKIGYEHRDT-PITKPVYWVGVR 411
>gi|11499635 2-ketoisovalerate ferredoxin oxidoreductase, subunit alpha (vorA)
[Archaeoglobus fulgidus] >gi|7449955|pir||D69506
probable 2-oxoisovalerate--ferredoxin oxidoreductase (EC
1.2.7.-) alpha chain AF2053 [similarity] - Archaeoglobus
fulgidus >gi|2648476|gb|AAB89196.1| (AE000961)
2-ketoisovalerate ferredoxin oxidoreductase, subunit
alpha (vorA) [Archaeoglobus fulgidus]
Length = 366
Score = 243 bits (613), Expect = 3e-63
Identities = 145/368 (39%), Positives = 215/368 (58%), Gaps = 30/368 (8%)
Query: 3 IRTVMKANEAAAWAAKLAKPKVIAAFPITPSTLVPEKISEFVANGELDAEFIKVESEHSA 62
++ ++ +NEA A A KLAKP VIAA+PITP + + EK+SE V +GELD+ F++VESEHSA
Sbjct: 13 MKKLLTSNEAIAEAVKLAKPDVIAAYPITPQSPIVEKLSEMVDSGELDSRFVRVESEHSA 72
Query: 63 ISALVGASAAGVRTFTATASQGLALMHEVLFIAAGMRLPIVMAIGNRALSAPINIWNDWQ 122
+ ++GA+ AG R FTAT+S GLA M+E+ + AAG RLPIVMA+ R++ AP NI D
Sbjct: 73 MGVVIGAATAGARVFTATSSHGLAYMYEMCWWAAGSRLPIVMALAARSIGAPWNIHGDHL 132
Query: 123 DTISQRDTGWIQFYAENNQEALDLILLAYKVAEDERVLLPAMVGFDAFILTHTVEPVEIP 182
D ++ RD GWI AEN QEA D+ L A+ ++E+ V +P V D F ++HT E VE+
Sbjct: 133 DLMAMRDLGWIISVAENAQEAFDMTLNAFMLSEE--VNIPVAVAIDGFTMSHTAEVVEVR 190
Query: 183 DQEVVDEFLGEYEPKHAY-LDPKRPITQGTLAFPAHYMEARYLVWEAMENARKVIDEAFA 241
+ E+ K AY + P + + F M ARY + + +EN+ ++I
Sbjct: 191 EVEIPPR-------KQAYRILPGMDVALNAVTFGEARMTARYDLAKDLENSAELI----- 238
Query: 242 EFEKKFGRKYQKIEEYRTDDAEIIFVTMGSLAGTLKDWVDKKREEGYKVGAAKMTVYRPF 301
EK++G +E YR +DA+ V G L+G +KD VD REEG K+G ++ RPF
Sbjct: 239 --EKEYG---GLVERYRLEDADYAVVVTGGLSGDVKDAVDMLREEGVKMGVLRLKFIRPF 293
Query: 302 PVEEIRELAKKTKVLAFIEKDISMGLYGAVFTDASAALINESEKPLMLDFIAGLGGRDVT 361
P + ++ L + V+ D L G + + +A + ++ +AG+GGR T
Sbjct: 294 PKKAVKSLPSQVLVVDRANTD----LRGTLSVEVAACGVEN------VNVVAGIGGRYPT 343
Query: 362 FNQLDEAL 369
+L L
Sbjct: 344 VEELYSCL 351
>gb|AAC38206.1| (AF021092) PorA subunit of pyruvate:flavodoxin oxidoreductase
[Helicobacter pylori]
Length = 408
Score = 230 bits (581), Expect = 2e-59
Identities = 139/390 (35%), Positives = 214/390 (54%), Gaps = 4/390 (1%)
Query: 6 VMKANEAAAWAAKLAKPKVIAAFPITPSTLVPEKISEFVANGELDAEFIKVESEHSAISA 65
V N A++ A + A+ VIAA+PITPST + + F NG +D +F VESEH+A+SA
Sbjct: 12 VWDGNTASSNALRQAQIDVIAAYPITPSTPIVQNYGSFKDNGYIDGDFALVESEHAAMSA 71
Query: 66 LVGASAAGVRTFTATASQGLALMHEVLFI-AAGMRLPIVMAIGNRALSAPINIWNDWQDT 124
VGA+AAG R TAT+SQG + +GMR IV + NRAL+AP+NI D D
Sbjct: 72 CVGAAAAGGRVSTATSSQGSGVNGRGFITKVSGMRSAIVGNLVNRALAAPLNIHGDHSDM 131
Query: 125 ISQRDTGWIQFYAENNQEALDLILLAYKVAEDERVLLPAMVGFDAFILTHTVEPVEIPDQ 184
RD+GWI N QEA D L+A+K+ E ++V +P +V D F+ +HTV+ V
Sbjct: 132 YLSRDSGWISLCTCNPQEAYDFTLMAFKLGEHQKVRVPTIVNQDGFLCSHTVQNVRPLSD 191
Query: 185 EVVDEFLGEYEPKHAYLDPKRPITQGTLAFPAHYMEARYLVWEAMENARKVIDEAFAEFE 244
V +F+GEY+ KH+ +D +P++ G A + E + + A+ +A VI+E F +F
Sbjct: 192 GVAYQFVGEYQTKHSLVDFDKPVSYGAQAEEEWHYEHKARLHHAIMSASSVIEEVFNDFA 251
Query: 245 KKFGRKYQKIEEYRTDDAEIIFVTMGSLAGTLKDWVDKKREEGYKVGAAKMTVYRPFPVE 304
K GR+Y + ++ +DAEI +G+ + + R++G K G A + P +
Sbjct: 252 KLTGRQYHLTKTFQLEDAEIAIFALGTTYESAIVAAKEMRKKGIKAGVATIHSCAPSLMR 311
Query: 305 EIRELAKKTKVLAFIEKDISMGLYGAVFTDASAALINE--SEKPLMLDFIAGLGGRDVTF 362
+ K K LA ++K G GA+F + ++ + ++ P++ ++I GLG RD+T
Sbjct: 312 RLGRDLKNLKALAILDKRSPAGAMGAMFNEVTSTVYQTQGTKHPVVSNYIYGLGERDMTI 371
Query: 363 NQLDEALSIAKEALEKGKVEKPI-HWIGLR 391
L E E KG + P ++GLR
Sbjct: 372 AHLCEIFEEINEDALKGTLTHPTQQFVGLR 401
>emb|CAB43933.1| (Y17726) pyruvate ferredoxin oxidoreductase [Clostridium
pasteurianum]
Length = 1175
Score = 165 bits (413), Expect = 9e-40
Identities = 119/390 (30%), Positives = 200/390 (50%), Gaps = 16/390 (4%)
Query: 3 IRTVMKANEAAAWAAKLAKPKVIAAFPITPSTLVPEKISEFVANGELD-----AEFIKVE 57
I M NEAAA+A+ A +V A +PITPST + E + E+ A+ + + ++++
Sbjct: 4 IMKTMDGNEAAAYAS-YAFTEVAAIYPITPSTPMAESVDEWSAHDKKNIFDQAVNVVEMQ 62
Query: 58 SEHSAISALVGASAAGVRTFTATASQGLALMHEVLFIAAGMRLPIVMAIGNRALSA-PIN 116
SE A ++ G+ AAG T T TASQGL LM ++ AG +LP V + RA++ ++
Sbjct: 63 SEAGAAGSVHGSLAAGALTTTYTASQGLLLMIPNMYKIAGEQLPTVFHVSARAIATHALS 122
Query: 117 IWNDWQDTISQRDTGWIQFYAENNQEALDLILLAYKVAEDERVLLPAMVGFDAFILTHTV 176
I+ D QD ++ R TG+ + + QEA+DL +++ +V P + FD F +H
Sbjct: 123 IFGDHQDVMACRQTGFALLASSSVQEAMDLGCISHLSTIKSKV--PFLHFFDGFRTSHEY 180
Query: 177 EPVEIPDQEVVDEFLGEY----EPKHAYLDPKRPITQGTLAFPAHYMEARYLVWEAMENA 232
+ +EI D E + + +Y E + L+P+ P+ +GT P Y + R + +
Sbjct: 181 QKIEIIDYEDLKNLV-DYNSIKEFRDKALNPEHPVVRGTAQNPDIYFQGREASNKFYDAV 239
Query: 233 RKVIDEAFAEFEKKFGRKYQKIEEYRTDDAEIIFVTMGSLAGTLKDWVDKKREEGYKVGA 292
+++ E + GR+Y + Y DAE I + MGS+ T+ + +D R +G KVG
Sbjct: 240 PDIVENYMKEIKSITGREYHPFDYYGAPDAENIIIAMGSVCDTIDESIDYLRNKGEKVGV 299
Query: 293 AKMTVYRPFPVEEIRELAKKT-KVLAFIEKDISMG-LYGAVFTDASAALINESEKPLMLD 350
K+ +YRPF + + KT K +A +++ G L ++ D N +EKP+++
Sbjct: 300 IKVHLYRPFSSKYFFNVFPKTVKKIAVLDRTKEPGSLAEPLYLDVVHLFNNSAEKPIIIG 359
Query: 351 FIAGLGGRDVTFNQLDEALSIAKEALEKGK 380
GLG +D +Q+ + K K K
Sbjct: 360 GRYGLGSKDTRPSQILSVFNNLKSDNPKDK 389
>gb|AAD55756.1|AF132673_1 (AF132673) pyruvate:ferredoxin oxidoreductase [Clostridium
pasteurianum]
Length = 1098
Score = 162 bits (407), Expect = 5e-39
Identities = 110/364 (30%), Positives = 192/364 (52%), Gaps = 16/364 (4%)
Query: 7 MKANEAAAWAAKLAKPKVIAAFPITPSTLVPEKISEFVANGELDA-----EFIKVESEHS 61
M NEAAA+A+ A +V A +PITPST + E + E+ A+ + + ++++SE
Sbjct: 6 MDGNEAAAYAS-YAFTEVAAIYPITPSTPMAESVDEWSAHDKKNVFDQAVNVVEMQSEAG 64
Query: 62 AISALVGASAAGVRTFTATASQGLALMHEVLFIAAGMRLPIVMAIGNRALSA-PINIWND 120
A ++ G+ AAG T T TASQGL LM ++ AG +LP V + RA++ ++I+ D
Sbjct: 65 AAGSVHGSLAAGALTTTYTASQGLLLMIPNMYKIAGEQLPTVFHVSARAIATHALSIFGD 124
Query: 121 WQDTISQRDTGWIQFYAENNQEALDLILLAYKVAEDERVLLPAMVGFDAFILTHTVEPVE 180
QD ++ R TG+ + + QEA+DL +++ +V P + FD F +H ++ +E
Sbjct: 125 HQDVMACRQTGFALLASSSVQEAMDLGCISHLSTIKSKV--PFLHFFDGFRTSHEIQKIE 182
Query: 181 IPDQEVVDEFLGEYEPKHAY----LDPKRPITQGTLAFPAHYMEARYLVWEAMENARKVI 236
+ D E + + + + A+ L+P+ P+T+GT P Y + R + +++
Sbjct: 183 VIDYEDLRPLV-DIDAVKAFRNNALNPEHPVTRGTAENPDVYFQGREASNKYYNAIPELV 241
Query: 237 DEAFAEFEKKFGRKYQKIEEYRTDDAEIIFVTMGSLAGTLKDWVDKKREEGYKVGAAKMT 296
+ E K GR+Y Y +DAE I + MGS++ +++ +D +G KVG K+
Sbjct: 242 ENYMGEISKITGREYHLFNYYGAEDAERIIIAMGSISDAIEETIDYLNAKGEKVGVLKVH 301
Query: 297 VYRPFPVEE-IRELAKKTKVLAFIEKDISMGLYG-AVFTDASAALINESEKPLMLDFIAG 354
++RPF VE + + K K +A +++ G YG ++ D A P+++ G
Sbjct: 302 LFRPFSVEHFFKYIPKTVKKIAVLDRTKEPGSYGEPLYLDVVTAFYQSDLNPVIVGGRYG 361
Query: 355 LGGR 358
LG +
Sbjct: 362 LGSK 365
>emb|CAB43935.1| (Y17727) pyruvate ferredoxin oxidoreductase [Clostridium
pasteurianum]
Length = 1175
Score = 159 bits (397), Expect = 7e-38
Identities = 112/365 (30%), Positives = 185/365 (50%), Gaps = 16/365 (4%)
Query: 7 MKANEAAAWAAKLAKPKVIAAFPITPSTLVPEKISEFVANGELD-----AEFIKVESEHS 61
M N AAA A A V A +PITPS+ + E + E+ G + + ++++SE
Sbjct: 7 MDGNTAAAHIA-YAFTDVTAIYPITPSSPMAEHVDEWAVQGRKNLFGQTVKVMEMQSEAG 65
Query: 62 AISALVGASAAGVRTFTATASQGLALMHEVLFIAAGMRLPIVMAIGNRALSAP-INIWND 120
A A+ G+ AG T T TASQGL LM ++ AG LP V + RAL+ +NI+ D
Sbjct: 66 AAGAVHGSLQAGALTTTFTASQGLLLMIPNMYKIAGELLPGVFHVSARALATKSLNIFGD 125
Query: 121 WQDTISQRDTGWIQFYAENNQEALDLILLAYKVAEDERVLLPAMVGFDAFILTHTVEPVE 180
QD ++ R TG+ + QE +DL +A+ A +V P + FD F +H ++ +E
Sbjct: 126 HQDVMAARQTGFALLAEGSVQEVMDLSAVAHLAAIKGKV--PFLNFFDGFRTSHEIQKIE 183
Query: 181 IPDQEVVDEFLGEYEPKHAY----LDPKRPITQGTLAFPAHYMEARYLVWEAMENARKVI 236
+ D E + + + + A+ L+P+ P+T+GT P Y + R + +++
Sbjct: 184 VIDYEDLRPLV-DIDAVKAFRNNALNPEHPVTRGTAENPDVYFQGREASNKYYNAIPELV 242
Query: 237 DEAFAEFEKKFGRKYQKIEEYRTDDAEIIFVTMGSLAGTLKDWVDKKREEGYKVGAAKMT 296
+ E K GR+Y Y +DAE I + MGS++ +++ +D +G KVG K+
Sbjct: 243 ENYMGEISKITGREYHLFNYYGAEDAERIIIAMGSISDAIEETIDYLNAKGEKVGVLKVH 302
Query: 297 VYRPFPVEE-IRELAKKTKVLAFIEKDISMGLYG-AVFTDASAALINESEKPLMLDFIAG 354
++RPF VE + + K K +A +++ G YG ++ D A P+++ G
Sbjct: 303 LFRPFSVEHFFKYIPKTVKKIAVLDRTKEPGSYGEPLYLDVVTAFYQSDLNPVIVGGRYG 362
Query: 355 LGGRD 359
LG +D
Sbjct: 363 LGSKD 367
>pir||A81294 pyruvate-flavodoxin oxidoreductase Cj1476c [imported] -
Campylobacter jejuni (strain NCTC 11168)
>gi|6968902|emb|CAB73898.1| (AL139078)
pyruvate-flavodoxin oxidoreductase [Campylobacter
jejuni]
Length = 1186
Score = 151 bits (377), Expect = 2e-35
Identities = 118/393 (30%), Positives = 193/393 (49%), Gaps = 21/393 (5%)
Query: 3 IRTVMKANEAAAWAAKLAKPKVIAAFPITPSTLVPEKISEFVANGE-----LDAEFIKVE 57
I M NEAAA+AA A +V +PITPS+ + + + A G+ + + ++++
Sbjct: 4 IMKTMDGNEAAAYAA-YAFTEVAGIYPITPSSPMADYTDMWAAAGKKNLFGVPVKIVEMQ 62
Query: 58 SEHSAISALVGASAAGVRTFTATASQGLALMHEVLFIAAGMRLPIVMAIGNRALSAP-IN 116
SE A ++ G+ AG T T TASQGL L ++ AG LP V+ + R+L+A ++
Sbjct: 63 SEAGAAGSVHGSLQAGALTTTYTASQGLLLKIPNMYKIAGQLLPCVIHVAARSLAAQALS 122
Query: 117 IWNDWQDTISQRDTGWIQFYAENNQEALDLILLAYKVAEDERVLLPAMVGFDAFILTHTV 176
I+ D QD + R G+ + + QE +DL +A+ A RV P + FD F +H +
Sbjct: 123 IFGDHQDIYAARQIGFAMLCSHSVQETMDLAGVAHLAAIKGRV--PFLHFFDGFRTSHEI 180
Query: 177 EPVEIPDQEVVDEFLGE---YEPKHAYLDPKRPITQGTLAFPAHYMEARYLVWEAMENAR 233
+ VE+ D D L E ++ L+P+ P T+GT Y + R + +
Sbjct: 181 QKVEVMDYAHFDRLLDREALLEFRNNALNPENPKTRGTAQNDDIYFQTREVSNRFYDALP 240
Query: 234 KVIDEAFAEFEKKFGRKYQKIEEYRTDDAEIIFVTMGSLAGTLKDWVDKKREEGYKVGAA 293
V++E E K GR+Y+ Y + E + V MGS+ L++ VD +G KVG
Sbjct: 241 DVVNEYMQEISKITGREYKPFTYYGHKEPECVIVAMGSVTQALEEVVDYLNAKGEKVGIL 300
Query: 294 KMTVYRPFPVEEIRE-LAKKTKVLAFIEKDISMGLYG-AVFTDASAALINESEKPLMLDF 351
K+ +YRPF ++ + + K K +A +++ G G ++ D +A P+++
Sbjct: 301 KVYLYRPFSLKYFFDVMPKSVKKIAVLDRTKEPGSLGEPLYLDVKSAFYGRENAPVIVGG 360
Query: 352 IAGLGGRDVTFNQLDEALSIAKEALEKGKVEKP 384
GL +DV D A IA E K++ P
Sbjct: 361 RYGLSSKDV-----DPAQMIA--VFENLKLDNP 386
>sp|P19543|NIFJ_ENTAG PYRUVATE-FLAVODOXIN OXIDOREDUCTASE >gi|469077|emb|CAA55302.1|
(X78558) nifJ [Pantoea agglomerans]
>gi|1480137|emb|CAA68011.1| (X99694) nifJ [Enterobacter
agglomerans]
Length = 1173
Score = 150 bits (374), Expect = 3e-35
Identities = 107/365 (29%), Positives = 178/365 (48%), Gaps = 14/365 (3%)
Query: 7 MKANEAAAWAAKLAKPKVIAAFPITPSTLVPEKISEFVANGELD-----AEFIKVESEHS 61
M N AAA+ + A V A +PITPST + E + E+ A G+ + + ++++SE
Sbjct: 8 MDGNTAAAYVS-YAFTDVTAIYPITPSTPMAESVDEWAAQGKKNLFGQTVKIMEMQSESG 66
Query: 62 AISALVGASAAGVRTFTATASQGLALMHEVLFIAAGMRLPIVMAIGNRALSA-PINIWND 120
A A+ GA AG T TASQGL LM ++ AG LP V + RAL+ +NI+ D
Sbjct: 67 AAGAIHGALQAGALATTYTASQGLLLMTPNMYKIAGELLPAVFHVSARALATNSLNIFGD 126
Query: 121 WQDTISQRDTGWIQFYAENNQEALDLILLAYKVAEDERVLLPAMVGFDAFILTHTVEPVE 180
QD+ + R TG + Q+ +DL +A+ A R+ P + FD F +H ++ +E
Sbjct: 127 HQDSYAVRHTGCAMLAESSVQQVMDLAAVAHLTAIKGRI--PFINFFDGFRTSHEIQKIE 184
Query: 181 IPDQEVVDEFLGE---YEPKHAYLDPKRPITQGTLAFPAHYMEARYLVWEAMENARKVID 237
+ D E + L + L P P+ +GT P Y + R + ++++
Sbjct: 185 VLDYEDLAHLLDRDAVARFRQNALHPDHPVVRGTAQNPDIYFQEREASNKFYMALPEMVE 244
Query: 238 EAFAEFEKKFGRKYQKIEEYRTDDAEIIFVTMGSLAGTLKDWVDKKREEGYKVGAAKMTV 297
A+ GR+Y Y DA + + MGS+ T+++ VD G KVG + +
Sbjct: 245 SYMAKISALTGREYHLFNYYGAPDAGRMIIAMGSVCETIQETVDYLNARGEKVGVLTVHL 304
Query: 298 YRPFPVEE-IRELAKKTKVLAFIEKDISMG-LYGAVFTDASAALINESEKPLMLDFIAGL 355
YRPF ++ + + K +A +++ G L ++ D +A N +P+++ L
Sbjct: 305 YRPFSLKHFFKYIPKSVSNIAVLDRTKEPGSLAEPLYLDVKSAFYNSDWRPVIVGGRYAL 364
Query: 356 GGRDV 360
GG+D+
Sbjct: 365 GGKDI 369
>sp|P03833|NIFJ_KLEPN PYRUVATE-FLAVODOXIN OXIDOREDUCTASE >gi|43821|emb|CAA31665.1|
(X13303) nifJ protein (AA 1-1171) [Klebsiella
pneumoniae]
Length = 1171
Score = 148 bits (370), Expect = 1e-34
Identities = 109/370 (29%), Positives = 176/370 (47%), Gaps = 14/370 (3%)
Query: 7 MKANEAAAWAAKLAKPKVIAAFPITPSTLVPEKISEFVANGELD-----AEFIKVESEHS 61
M N AAAW + A +V A +PITPST + E + E+ A G+ + ++++SE
Sbjct: 8 MDGNAAAAWIS-YAFTEVAAIYPITPSTPMAENVDEWAAQGKKNLFGQPVRLMEMQSEAG 66
Query: 62 AISALVGASAAGVRTFTATASQGLALMHEVLFIAAGMRLPIVMAIGNRALSA-PINIWND 120
A A+ GA AG T T TASQGL LM ++ AG LP V + RAL+ +NI+ D
Sbjct: 67 AAGAVHGALQAGALTTTYTASQGLLLMIPNMYKIAGELLPGVFHVSARALATNSLNIFGD 126
Query: 121 WQDTISQRDTGWIQFYAENNQEALDLILLAYKVAEDERVLLPAMVGFDAFILTHTVEPVE 180
QD ++ R TG N Q+ +DL +A+ A R+ P + FD F +H ++ +E
Sbjct: 127 HQDVMAVRQTGCAMLAENNVQQVMDLSAVAHLAAIKGRI--PFVNFFDGFRTSHEIQKIE 184
Query: 181 IPDQEVVDEFLGE---YEPKHAYLDPKRPITQGTLAFPAHYMEARYLVWEAMENARKVID 237
+ + E + L + L P P+ +GT P Y + R + +++
Sbjct: 185 VLEYEQLATLLDRPALDSFRRNALHPDHPVIRGTAQNPDIYFQEREAGNRFYQALPDIVE 244
Query: 238 EAFAEFEKKFGRKYQKIEEYRTDDAEIIFVTMGSLAGTLKDWVDKKREEGYKVGAAKMTV 297
+ GR+Y DAE + + MGS+ T+++ VD G KVG + +
Sbjct: 245 SYMTQISALTGREYHLFNYTGAADAERVIIAMGSVCDTVQEVVDTLNAAGEKVGLLSVHL 304
Query: 298 YRPFPVEE-IRELAKKTKVLAFIEKDISMGLYG-AVFTDASAALINESEKPLMLDFIAGL 355
+RPF + +L K + +A +++ G + D A + + PL++ L
Sbjct: 305 FRPFSLAHFFAQLPKTVQRIAVLDRTKEPGAQAEPLCLDVKNAFYHHDDAPLIVGGRYAL 364
Query: 356 GGRDVTFNQL 365
GG+DV N +
Sbjct: 365 GGKDVLPNDI 374
>pir||QQKBFP pyruvate (flavodoxin) dehydrogenase nifJ (EC 1.2.99.-) - Klebsiella
pneumoniae >gi|43863|emb|CAA31501.1| (X13109)
pyruvate-flavodoxin oxidoreductase [Klebsiella
pneumoniae]
Length = 1171
Score = 148 bits (370), Expect = 1e-34
Identities = 109/370 (29%), Positives = 176/370 (47%), Gaps = 14/370 (3%)
Query: 7 MKANEAAAWAAKLAKPKVIAAFPITPSTLVPEKISEFVANGELD-----AEFIKVESEHS 61
M N AAAW + A +V A +PITPST + E + E+ A G+ + ++++SE
Sbjct: 8 MDGNAAAAWIS-YAFTEVAAIYPITPSTPMAENVDEWAAQGKKNLFGQPVRLMEMQSEAG 66
Query: 62 AISALVGASAAGVRTFTATASQGLALMHEVLFIAAGMRLPIVMAIGNRALSA-PINIWND 120
A A+ GA AG T T TASQGL LM ++ AG LP V + RAL+ +NI+ D
Sbjct: 67 AAGAVHGALQAGALTTTYTASQGLLLMIPNMYKIAGELLPGVFHVSARALATNSLNIFGD 126
Query: 121 WQDTISQRDTGWIQFYAENNQEALDLILLAYKVAEDERVLLPAMVGFDAFILTHTVEPVE 180
QD ++ R TG N Q+ +DL +A+ A R+ P + FD F +H ++ +E
Sbjct: 127 HQDVMAVRQTGCAMLAENNVQQVMDLSAVAHLAAIKGRI--PFVNFFDGFRTSHEIQKIE 184
Query: 181 IPDQEVVDEFLGE---YEPKHAYLDPKRPITQGTLAFPAHYMEARYLVWEAMENARKVID 237
+ + E + L + L P P+ +GT P Y + R + +++
Sbjct: 185 VLEYEQLATLLDRPALDSFRRNALHPDHPVIRGTAQNPDIYFQEREAGNRFYQALPDIVE 244
Query: 238 EAFAEFEKKFGRKYQKIEEYRTDDAEIIFVTMGSLAGTLKDWVDKKREEGYKVGAAKMTV 297
+ GR+Y DAE + + MGS+ T+++ VD G KVG + +
Sbjct: 245 SYMTQISALTGREYHLFNYTGAADAERVIIAMGSVCDTVQEVVDTLNAAGEKVGLLSVHL 304
Query: 298 YRPFPVEE-IRELAKKTKVLAFIEKDISMGLYG-AVFTDASAALINESEKPLMLDFIAGL 355
+RPF + +L K + +A +++ G + D A + + PL++ L
Sbjct: 305 FRPFSLAHFFAQLPKTVQRIAVLDRTKEPGAQAEPLCLDVKNAFYHHDDAPLIVGGRYAL 364
Query: 356 GGRDVTFNQL 365
GG+DV N +
Sbjct: 365 GGKDVLPNDI 374
>pir||G71262 probable pyruvate (flavodoxin) dehydrogenase (EC 1.2.99.-) TP0939 -
syphilis spirochete >gi|3323259|gb|AAC65895.1|
(AE001262) pyruvate oxidoreductase [Treponema pallidum]
Length = 1184
Score = 145 bits (363), Expect = 7e-34
Identities = 112/376 (29%), Positives = 187/376 (48%), Gaps = 24/376 (6%)
Query: 6 VMKANEAAAWAAKLAKPKVIAAFPITPSTLVPEKISEFVANGELD-----AEFIKVESEH 60
+M N A A A +VIA FPITPS+ + E E+ A G + ++++SE
Sbjct: 8 MMDGNTAVGHVAH-ALSEVIAIFPITPSSPMGEIADEYSARGRTNIWGTVPTVVELQSEA 66
Query: 61 SAISALVGASAAGVRTFTATASQGLALMHEVLFIAAGMRLPIVMAIGNRAL-SAPINIWN 119
A A+ GA G + T TASQGL LM ++ AG V + RA+ ++ ++I+
Sbjct: 67 GASGAVHGALTTGALSSTFTASQGLLLMIPNMYKIAGELTSAVFHVAARAVATSSLSIFG 126
Query: 120 DWQDTISQRDTGWIQFYAENNQEALDLILLAYKVAEDERVLLPAMVGFDAFILTHTVEPV 179
D QD ++ R TGW + + QEA+D ++A+ + RV P + FD F +H ++ +
Sbjct: 127 DHQDVMACRQTGWALLASNSVQEAMDTAVIAHAATLEARV--PFVHFFDGFRTSHEIQKI 184
Query: 180 EIPDQEVVDEFLGEYEPKHAY----LDPKRPITQGTLAFPAHYMEARYLVWEAMENARKV 235
E +V+ + + E HA+ L P++P+ +GT P Y + R V A +
Sbjct: 185 EEVSYDVMRAMIDD-ELVHAHRMRGLTPEKPVVRGTAQNPDVYFQVRESVNRYYAVAPSI 243
Query: 236 IDEAFAEFEKKFGRKYQKIEEYRTDDAEIIFVTMGSLAGTLKDWVDKKREEGYKVGAAKM 295
+ +A + GR+Y+ + Y DAE + V +GS + +++ VD +G K G K+
Sbjct: 244 VQKAMDRYAALTGRQYRLFDYYGAPDAEKVIVMIGSGSEAVEETVDVLNAQGGKCGLVKV 303
Query: 296 TVYRPFPVE-EIRELAKKTKVLAFIEKDISMGLYG-AVFTDASAALIN-ESEK------- 345
+YRPF E + L K + +A +++ G G ++ D A+ +S+K
Sbjct: 304 RLYRPFSAECFVNALPKTVQAIAVLDRTKEPGSLGEPLYEDVRTAIGQMQSQKKCPFTHY 363
Query: 346 PLMLDFIAGLGGRDVT 361
PL+L GLG ++ T
Sbjct: 364 PLVLGGRYGLGSKEFT 379
>gb|AAC83148.1| (AF061850) putative pyruvate oxidoreductase; POR [Brachyspira
pilosicoli]
Length = 275
Score = 143 bits (357), Expect = 3e-33
Identities = 89/262 (33%), Positives = 133/262 (49%), Gaps = 6/262 (2%)
Query: 45 ANGELDAEFIKVESEHSAISALVGASAAGVRTFTATASQGLALMHEVLFIAAGMRLPIVM 104
ANG I + EH A GA+ AG R F AT++ GL E L + AG R P+V+
Sbjct: 3 ANGRHTVCMIPGDGEHGAAGICYGATTAGGRVFNATSANGLLFAMEQLPVQAGTRFPMVL 62
Query: 105 AIGNRALSAPINIWNDWQDTISQRDTGWIQFYAENNQEALDLILLAYKVAEDERVLLPAM 164
+ NR +S P++I D D + +TGWI A Q D + A K+A E+ LP +
Sbjct: 63 NVVNRTVSGPLDIKCDQSDIMMALNTGWIIIMAHTTQMVYDFNIFALKIA--EKAKLPII 120
Query: 165 VGFDAFILTHTVEPVEI-PDQEVVDEFLGEYEPKHAYLDP-KRPITQGTLAFPAHYMEAR 222
V D F +H + + + + + V +FLG+Y P+ ++P K P+T G ++
Sbjct: 121 VSSDGFFTSHQKKKIHLFKNDKDVQDFLGKYTPEVTSVEPTKNPVTIGPYMNEDELTGSK 180
Query: 223 YLVWEAMENARKVIDEAFAEFEKKFGRKYQKIEEYRTDDAEIIFVTMGSL--AGTLKDWV 280
+ +A+E++R +I E F EF GRKY IE + + AE+ + GS GTL
Sbjct: 181 LQLSQALEDSRAIIAEVFEEFASLSGRKYSPIETHNMEGAEVALMLCGSAYETGTLAVDE 240
Query: 281 DKKREEGYKVGAAKMTVYRPFP 302
+K K+GA +T RPFP
Sbjct: 241 MRKANPNLKIGAFAITQIRPFP 262
>emb|CAA70873.1| (Y09702) pyruvate-ferredoxin oxidoreductase [Desulfovibrio
africanus]
Length = 1232
Score = 138 bits (345), Expect = 9e-32
Identities = 109/364 (29%), Positives = 177/364 (47%), Gaps = 19/364 (5%)
Query: 10 NEAAAWAAKLAKPKVIAAFPITPSTLVPEKISEFVANGELDA-----EFIKVESEHSAIS 64
N A A A A +V A +PITPS+ + E+ ++ A G + +++SE A
Sbjct: 11 NTATAHVA-YAMSEVAAIYPITPSSTMGEEADDWAAQGRKNIFGQTLTIREMQSEAGAAG 69
Query: 65 ALVGASAAGVRTFTATASQGLALMHEVLFIAAGMRLPIVMAIGNRALSA-PINIWNDWQD 123
A+ GA AAG T T TASQGL LM ++ +G LP V + RA++A ++I+ D QD
Sbjct: 70 AVHGALAAGALTTTFTASQGLLLMIPNMYKISGELLPGVFHVTARAIAAHALSIFGDHQD 129
Query: 124 TISQRDTGWIQFYAENNQEALDLILLAYKVAEDERVLLPAMVGFDAFILTHTVEPVEIPD 183
+ R TG+ + + QEA D+ L+A+ A + V P M FD F +H ++ +E+ D
Sbjct: 130 IYAARQTGFAMLASSSVQEAHDMALVAHLAAIESNV--PFMHFFDGFRTSHEIQKIEVLD 187
Query: 184 QE-----VVDEFLGEYEPKHAYLDPKRPITQGTLAFPAHYMEARYLVWEAMENARKVIDE 238
V + L E+ K ++P+ P +GT P Y + R ++ E
Sbjct: 188 YADMASLVNQKALAEFRAKS--MNPEHPHVRGTAQNPDIYFQGREAANPYYLKVPGIVAE 245
Query: 239 AFAEFEKKFGRKYQKIEEYRTDDAEIIFVTMGSLAGTLKDWVDKKREEGYKVGAAKMTVY 298
+ GR Y+ + DAE + V+MGS T+++ ++ +G K+G K+ +Y
Sbjct: 246 YMQKVASLTGRSYKLFDYVGAPDAERVIVSMGSSCETIEEVINHLAAKGEKIGLIKVRLY 305
Query: 299 RPFPVEE-IRELAKKTKVLAFIEKDISMGLYG-AVFTDASAALINESE-KPLMLDFIAGL 355
RPF E L KV+ +++ G G ++ D +A + E P +L GL
Sbjct: 306 RPFVSEAFFAALPASAKVITVLDRTKEPGAPGDPLYLDVCSAFVERGEAMPKILAGRYGL 365
Query: 356 GGRD 359
G ++
Sbjct: 366 GSKE 369
>pdb|1B0P|A Chain A, Crystal Structure Of Pyruvate-Ferredoxin Oxidoreductase
From Desulfovibrio Africanus >gi|4558092|pdb|1B0P|B
Chain B, Crystal Structure Of Pyruvate-Ferredoxin
Oxidoreductase From Desulfovibrio Africanus
>gi|4558221|pdb|2PDA|A Chain A, Crystal Structure Of The
Complex Between Pyruvate- Ferredoxin Oxidoreductase From
Desulfovibrio Africanus And Pyruvate.
>gi|4558222|pdb|2PDA|B Chain B, Crystal Structure Of The
Complex Between Pyruvate- Ferredoxin Oxidoreductase From
Desulfovibrio Africanus And Pyruvate
Length = 1231
Score = 138 bits (345), Expect = 9e-32
Identities = 109/364 (29%), Positives = 177/364 (47%), Gaps = 19/364 (5%)
Query: 10 NEAAAWAAKLAKPKVIAAFPITPSTLVPEKISEFVANGELDA-----EFIKVESEHSAIS 64
N A A A A +V A +PITPS+ + E+ ++ A G + +++SE A
Sbjct: 10 NTATAHVA-YAMSEVAAIYPITPSSTMGEEADDWAAQGRKNIFGQTLTIREMQSEAGAAG 68
Query: 65 ALVGASAAGVRTFTATASQGLALMHEVLFIAAGMRLPIVMAIGNRALSA-PINIWNDWQD 123
A+ GA AAG T T TASQGL LM ++ +G LP V + RA++A ++I+ D QD
Sbjct: 69 AVHGALAAGALTTTFTASQGLLLMIPNMYKISGELLPGVFHVTARAIAAHALSIFGDHQD 128
Query: 124 TISQRDTGWIQFYAENNQEALDLILLAYKVAEDERVLLPAMVGFDAFILTHTVEPVEIPD 183
+ R TG+ + + QEA D+ L+A+ A + V P M FD F +H ++ +E+ D
Sbjct: 129 IYAARQTGFAMLASSSVQEAHDMALVAHLAAIESNV--PFMHFFDGFRTSHEIQKIEVLD 186
Query: 184 QE-----VVDEFLGEYEPKHAYLDPKRPITQGTLAFPAHYMEARYLVWEAMENARKVIDE 238
V + L E+ K ++P+ P +GT P Y + R ++ E
Sbjct: 187 YADMASLVNQKALAEFRAKS--MNPEHPHVRGTAQNPDIYFQGREAANPYYLKVPGIVAE 244
Query: 239 AFAEFEKKFGRKYQKIEEYRTDDAEIIFVTMGSLAGTLKDWVDKKREEGYKVGAAKMTVY 298
+ GR Y+ + DAE + V+MGS T+++ ++ +G K+G K+ +Y
Sbjct: 245 YMQKVASLTGRSYKLFDYVGAPDAERVIVSMGSSCETIEEVINHLAAKGEKIGLIKVRLY 304
Query: 299 RPFPVEE-IRELAKKTKVLAFIEKDISMGLYG-AVFTDASAALINESE-KPLMLDFIAGL 355
RPF E L KV+ +++ G G ++ D +A + E P +L GL
Sbjct: 305 RPFVSEAFFAALPASAKVITVLDRTKEPGAPGDPLYLDVCSAFVERGEAMPKILAGRYGL 364
Query: 356 GGRD 359
G ++
Sbjct: 365 GSKE 368
>emb|CAA57480.1| (X81893) nifJ [Enterobacter agglomerans]
Length = 308
Score = 138 bits (344), Expect = 1e-31
Identities = 96/304 (31%), Positives = 150/304 (48%), Gaps = 12/304 (3%)
Query: 7 MKANEAAAWAAKLAKPKVIAAFPITPSTLVPEKISEFVANGELD-----AEFIKVESEHS 61
M N AAA+ + A V A +PITPST + E + E+ A G+ + + ++++SE
Sbjct: 8 MDGNTAAAYVS-YAFTDVTAIYPITPSTPMAESVDEWAAQGKKNLFGQTVKVMEMQSESG 66
Query: 62 AISALVGASAAGVRTFTATASQGLALMHEVLFIAAGMRLPIVMAIGNRALSA-PINIWND 120
A A+ GA AG T TASQGL LM ++ AG LP V + RAL+ +NI+ D
Sbjct: 67 AAGAIHGALQAGALATTYTASQGLLLMTPNMYKIAGELLPAVFHVSARALATNSLNIFGD 126
Query: 121 WQDTISQRDTGWIQFYAENNQEALDLILLAYKVAEDERVLLPAMVGFDAFILTHTVEPVE 180
QD ++ R TG + Q+ +DL +A+ A R+ P + FD F +H ++ +E
Sbjct: 127 HQDVMAVRQTGCAMLAESSVQQVMDLAAVAHLTAIKGRI--PFINFFDGFRTSHEIQKIE 184
Query: 181 IPDQEVVDEFL---GEYEPKHAYLDPKRPITQGTLAFPAHYMEARYLVWEAMENARKVID 237
+ D E + L + L P P+ +GT P Y + R + ++++
Sbjct: 185 VLDYEELAALLDWDAVTRFRQNALHPDHPVVRGTAQNPDIYFQEREASNKFYMALPEMVE 244
Query: 238 EAFAEFEKKFGRKYQKIEEYRTDDAEIIFVTMGSLAGTLKDWVDKKREEGYKVGAAKMTV 297
A+ K GR+Y Y DA + + MGS+ T+++ VD G KVG + +
Sbjct: 245 SYMAKISKLTGREYHLFNYYGAPDAGRMIIAMGSVCETIQETVDYLNASGEKVGVLTVHL 304
Query: 298 YRPF 301
YRPF
Sbjct: 305 YRPF 308
>pir||C70403 ferredoxin oxidoreductase alpha subunit - Aquifex aeolicus
>gi|2983644|gb|AAC07211.1| (AE000728) ferredoxin
oxidoreductase alpha subunit [Aquifex aeolicus]
Length = 404
Score = 138 bits (344), Expect = 1e-31
Identities = 97/337 (28%), Positives = 161/337 (46%), Gaps = 19/337 (5%)
Query: 10 NEAAAWAAKLAKPKVIAAFPITPSTLVPEKISEFVANGELDAEFIKVESEHSAISALVGA 69
+EA AAK A ++PITP + + E G + F + ESE +S + G
Sbjct: 39 SEAVKEAAKRASVDASISYPITPQSEAAHMLGELWREGYIGVYF-RGESEFGVMSEVAGC 97
Query: 70 SAAGVRTFTATASQGLALMHEVLFIAAGMRLPIVMAIGNRALSAPINIWNDWQDTISQRD 129
+ AG RT T T+ G EV + AG RLPI + + R +++P++I D + D
Sbjct: 98 AMAGARTITTTSGPGTMRAMEVFPMWAGSRLPIQLVLMARGINSPLSIQPDNLEISFLLD 157
Query: 130 TGWIQFYAENNQEALDLILLAYKVAEDERVLLPAMVGFDAFILTHTVEPVEIPDQEVVDE 189
TG + ++AE QE D+I+ + VAE V +P + D F ++HT E V +P +++
Sbjct: 158 TGCMVWHAETAQELFDMIIAGFVVAEQPDVHVPIITAIDGFFISHTREAVYLPPEDIA-- 215
Query: 190 FLGEYEPKHAYLDP-KRPITQGTLAFPAHYMEARYLVWEAMENARKVIDEAFAEFEKKFG 248
L Y P A + P + G M++ Y+ + A + + A E + +
Sbjct: 216 -LPPYNPYKAPMPPIDMEMPPGRFMRDPFVMKSNYISY-ATHASWQFEVRAAIERSRPYA 273
Query: 249 RKYQK--IEEYRTDDAEIIFVTMGSLAGTLKDWVD-KKREEGYKVGAAKMTVYRPFPVEE 305
+ Y + +E + + E++F+ G+ A K+ EEG K ++ RPFP EE
Sbjct: 274 KHYLRGLVEHFGDPEGEVLFIASGTAAAQAKEATQILIHEEGIKARVLRLKTLRPFPTEE 333
Query: 306 IRELAKKTK--------VLAFIEKDISMGLYGAVFTD 334
+RE K K V+ ++E+++ LYG +TD
Sbjct: 334 VREAVKGAKYIFIPEFNVVGWLEREVKRALYG--YTD 368
>dbj|BAA95605.1| (AB042412) pyruvate:ferredoxin oxidoreductase alpha subunit
[Hydrogenobacter thermophilus]
Length = 400
Score = 138 bits (343), Expect = 1e-31
Identities = 93/333 (27%), Positives = 156/333 (45%), Gaps = 14/333 (4%)
Query: 7 MKANEAAAWAAKLAKPKVIAAFPITPSTLVPEKISEFVANGELDAEFIKVESEHSAISAL 66
M +EA A K A ++PITP + I E G + F + ESE +S +
Sbjct: 33 MTGSEAVKEAVKRASVDASVSYPITPQSEAAHLIGELWVEGYVGVYF-RGESEFGVMSEI 91
Query: 67 VGASAAGVRTFTATASQGLALMHEVLFIAAGMRLPIVMAIGNRALSAPINIWNDWQDTIS 126
G + AG RT T T+ G E + AG R+P+ + + R ++AP++I D +
Sbjct: 92 AGCALAGARTITTTSGPGTLRAMENFPMWAGTRIPVQLVLMARGVNAPLSIQPDNLEVSF 151
Query: 127 QRDTGWIQFYAENNQEALDLILLAYKVAEDERVLLPAMVGFDAFILTHTVEPVEIPDQEV 186
DTG + +YAE Q+ D+IL + VAE V +P + D F ++HT E V +P ++
Sbjct: 152 LLDTGCMIWYAETAQDLFDMILAGFVVAEQPDVHVPVITVVDGFFVSHTRETVMLPPDDI 211
Query: 187 VDEFLGEYEPKHAYLDPKRPITQGTLAFPAHYMEARYLVWEAMENARKVIDEAFAEFEKK 246
Y +D + P G M++ Y+ + + + + A E +
Sbjct: 212 ALPPYNPYRAPMPVIDAEVP--PGRFLRDPFVMKSNYISYATHASWQWEV-RAAIERSRP 268
Query: 247 FGRKYQK--IEEYRTDDAEIIFVTMGSLAGTLKDWVDKKREEGYKVGAAKMTVYRPFPVE 304
+ + Y + IE + +A+++FV G+ + K+ V +EG K+ RPFP+E
Sbjct: 269 YAKHYLRGLIEHFGDPEADLVFVACGTASAQAKEAVRMLEDEGISARVVKLKTIRPFPIE 328
Query: 305 EIRELAKKTK--------VLAFIEKDISMGLYG 329
E+RE K K V+ ++E+++ LYG
Sbjct: 329 ELREATKGAKYIFVPEFNVVGWLEREVRRYLYG 361
>sp|P52647|NIFJ_ECOLI PROBABLE PYRUVATE-FLAVODOXIN OXIDOREDUCTASE >gi|7431614|pir||E64888
probable pyruvate (flavodoxin) dehydrogenase (EC
1.2.99.-) ydbK - Escherichia coli
>gi|1742250|dbj|BAA14982.1| (D90775) Pyruvate-flavodoxin
oxidoreductase (EC 1.-.-.-). [Escherichia coli]
>gi|1742256|dbj|BAA14987.1| (D90776) Pyruvate-flavodoxin
oxidoreductase (EC 1.-.-.-). [Escherichia coli]
>gi|1787642|gb|AAC74460.1| (AE000234) putative
oxidoreductase, Fe-S subunit [Escherichia coli K12]
Length = 1174
Score = 134 bits (335), Expect = 1e-30
Identities = 101/350 (28%), Positives = 167/350 (46%), Gaps = 18/350 (5%)
Query: 23 KVIAAFPITPSTLVPEKISEFVANGELDA-----EFIKVESEHSAISALVGASAAGVRTF 77
+VIA +PITPS+ + E+ + NG + ++++SE AI+ + GA G +
Sbjct: 19 EVIAIYPITPSSTMAEQADAWAGNGLKNVWGDTPRVVEMQSEAGAIATVHGALQTGALST 78
Query: 78 TATASQGLALMHEVLFIAAGMRLPIVMAIGNRALSA-PINIWNDWQDTISQRDTGWIQFY 136
+ T+SQGL LM L+ AG P V+ + R ++ ++I+ D D ++ R TG
Sbjct: 79 SFTSSQGLLLMIPTLYKLAGELTPFVLHVAARTVATHALSIFGDHSDVMAVRQTGCAMLC 138
Query: 137 AENNQEALDLILLAYKVAEDERVLLPAMVGFDAFILTHTVEPVEIPDQEVVDEFLGEYE- 195
A N QEA D L++ RV P + FD F +H + + + + + + + E
Sbjct: 139 AANVQEAQDFALISQIATLKSRV--PFIHFFDGFRTSHEINKIVPLADDTILDLMPQVEI 196
Query: 196 --PKHAYLDPKRPITQGTLAFPAHYMEARYLVWEAMENARKVIDEAFAEFEKKFGRKYQK 253
+ L+P+ P+ +GT A P Y ++R +++A +F GR+YQ
Sbjct: 197 DAHRARALNPEHPVIRGTSANPDTYFQSREATNPWYNAVYDHVEQAMNDFSAATGRQYQP 256
Query: 254 IEEYRTDDAEIIFVTMGSLAGTLKDWVDKKREEGYKVGAAKMTVYRPFPVEE-IRELAKK 312
E Y AE + + MGS GT ++ VD+ G KVG K+ +YRPF + ++ L
Sbjct: 257 FEYYGHPQAERVIILMGSAIGTCEEVVDELLTRGEKVGVLKVRLYRPFSAKHLLQALPGS 316
Query: 313 TKVLAFIEKDISMG-----LYGAVFTDASAALINESEKPLMLDFIAGLGG 357
+ +A +++ G LY V T A A N E+ + I G G
Sbjct: 317 VRSVAVLDRTKEPGAQAEPLYLDVMT-ALAEAFNNGERETLPRVIGGRYG 365
>sp|P52965|NIFJ_SYNY3 PUTATIVE PYRUVATE-FLAVODOXIN OXIDOREDUCTASE >gi|7431613|pir||S77082
pyruvate (flavodoxin) dehydrogenase (EC 1.2.99.-) nifJ -
Synechocystis sp. (strain PCC 6803)
>gi|1006618|dbj|BAA10774.1| (D64005) pyruvate
oxidoreductase [Synechocystis sp.]
Length = 1199
Score = 134 bits (334), Expect = 2e-30
Identities = 108/372 (29%), Positives = 179/372 (48%), Gaps = 14/372 (3%)
Query: 1 MPIRTVMKANEAAAWAAKLAKPKVIAAFPITPSTLVPEKISEFVANGELDAE-----FIK 55
+P + NEA A A L +VIA +PITPS+ + E + A + ++
Sbjct: 3 LPTYATLDGNEAVARVAYLLS-EVIAIYPITPSSPMGEWSDAWAAEHRPNLWGTVPLVVE 61
Query: 56 VESEHSAISALVGASAAGVRTFTATASQGLALMHEVLFIAAGMRLPIVMAIGNRALSAP- 114
++SE A + GA +G T T TASQGL LM + AG +V+ + R+L+A
Sbjct: 62 MQSEGGAAGTVHGALQSGALTTTFTASQGLMLMLPNMHKIAGELTAMVLHVAARSLAAQG 121
Query: 115 INIWNDWQDTISQRDTGWIQFYAENNQEALDLILLAYKVAEDERVLLPAMVGFDAFILTH 174
++I+ D D ++ R+TG+ + + QEA D L+A + R+ P + FD F +H
Sbjct: 122 LSIFGDHSDVMAARNTGFAMLSSNSVQEAHDFALIATATSFATRI--PGLHFFDGFRTSH 179
Query: 175 TVEPVEIPDQEVVDEFLGEYEP---KHAYLDPKRPITQGTLAFPAHYMEARYLVWEAMEN 231
+ +E+ QEV+ + + + + L P RP +GT P Y +AR V +
Sbjct: 180 EEQKIELLPQEVLRGLIKDEDVLAHRGRALTPDRPKLRGTAQNPDVYFQARETVNPFYAS 239
Query: 232 ARKVIDEAFAEFEKKFGRKYQKIEEYRTDDAEIIFVTMGSLAGTLKDWVDKKREEGYKVG 291
V+++ +F + GR Y+ E +AE + V MGS A T ++ VD +G KVG
Sbjct: 240 YPNVLEQVMEQFGQLTGRHYRPYEYCGHPEAERVIVLMGSGAETAQETVDFLTAQGEKVG 299
Query: 292 AAKMTVYRPFPVEE-IRELAKKTKVLAFIEKDISMGLYG-AVFTDASAALINESEKPLML 349
K+ +YRPF + + L K + +A +++ G G ++ D A P ++
Sbjct: 300 LLKVRLYRPFAGDRLVNALPKTVQKIAVLDRCKEPGSIGEPLYQDVLTAFFEAGMMPKII 359
Query: 350 DFIAGLGGRDVT 361
GL ++ T
Sbjct: 360 GGRYGLSSKEFT 371
>emb|CAB43934.1| (Y17727) pyruvate ferredoxin oxidoreductase [Clostridium
pasteurianum]
Length = 1181
Score = 133 bits (332), Expect = 3e-30
Identities = 105/366 (28%), Positives = 177/366 (47%), Gaps = 17/366 (4%)
Query: 7 MKANEAAAWAAKLAKPKVIAAFPITPSTLVPEKISEFVANGELD-----AEFIKVESEHS 61
M N AAA A A V +PITPS+ + + + + A G+ + + ++++SE
Sbjct: 8 MDGNTAAAHVA-YAYTDVAGIYPITPSSPMADSVDMWSAAGQENIFGNQVKVVEMQSEAG 66
Query: 62 AISALVGASAAGVRTFTATASQGLALMHEVLFIAAGMRLPIVMAIGNRALSA-PINIWND 120
A + G+ AAG T T TASQGL LM ++ AG LP V + R +++ +NI+ D
Sbjct: 67 AAGTVHGSLAAGALTTTFTASQGLLLMIPNMYKIAGEMLPSVFHVSARTVASHALNIFGD 126
Query: 121 WQDTISQRDTGWIQFYAENNQEALDLILLAYKVAEDERVLLPAMVGFDAFILTHTVEPVE 180
D + R G+ N QE +DL +A+ A + +V P + FD F +H ++ +E
Sbjct: 127 HSDVYACRQVGFAMLAETNPQEVMDLSPVAHLAALEGKV--PFINFFDGFRTSHEIQKIE 184
Query: 181 IPDQEVVDEFLGEYEPK----HAYLDPKRPITQGTLAFPAHYMEARYLVWEAMENARKVI 236
D E + E K HA L+P++P +G+ + + R A N ++
Sbjct: 185 KWDYEDLKEMCNMDAVKAFRDHA-LNPEKPAMRGSHENGDVFFQHREACNTAYNNLPAIV 243
Query: 237 DEAFAEFEKKFGRKYQKIEEYRTDDAEIIFVTMGSLAGTLKDWVDKKREEGYKVGAAKMT 296
++ A+ +K G Y Y +DA+ + + MGS+ ++ +D +G KVG K+
Sbjct: 244 EKYMAKVNEKLGTDYDLFNYYGAEDADRVIIAMGSICDVAEEVIDYLTAKGEKVGLVKVR 303
Query: 297 VYRPFPVEEI-RELAKKTKVLAFIEKDISMGLYG-AVFTDASAALINESEKPLMLDF-IA 353
+YRP+ E I + L K K +A +++ G G ++ D + L ++L
Sbjct: 304 LYRPWVSESILKALPKTAKKVAVLDRTKEPGALGDPLYLDVATTLREAGLNDIILTAGRY 363
Query: 354 GLGGRD 359
GLG +D
Sbjct: 364 GLGSKD 369
>pir||F82447 pyruvate-flavoredoxin oxidoreductase VCA0530 [imported] - Vibrio
cholerae (group O1 strain N16961)
>gi|9657937|gb|AAF96433.1| (AE004384)
pyruvate-flavoredoxin oxidoreductase [Vibrio cholerae]
Length = 1079
Score = 130 bits (323), Expect = 3e-29
Identities = 100/359 (27%), Positives = 172/359 (47%), Gaps = 22/359 (6%)
Query: 6 VMKANEAAAWAAKLAKPKVIAAFPITPSTLVPEKISEFVANGELDA-----EFIKVESEH 60
+ AN A A A +V+A +PITPST + E ++ + + + + ++++SE
Sbjct: 4 ITDANTAVARVAYQLS-EVLAVYPITPSTSMAESCEQWASQQKSNLLGDVPKLVEMQSEA 62
Query: 61 SAISALVGASAAGVRTFTATASQGLALMHEVLFIAAGMRLPIVMAIGNRALSA-PINIWN 119
+I+ + GA+ +G T T+SQGL LM L+ AG P V+ + R ++ ++I+
Sbjct: 63 GSIAVVHGAAMSGALATTFTSSQGLLLMIPSLYKLAGELTPCVIHVAARTVATHALSIYC 122
Query: 120 DWQDTISQRDTGWIQFYAENNQEALDLILLAYKVAEDERVLLPAMVGFDAFILTHTVEPV 179
D D ++ R TG A N QEA DL +A A R LP + FD F+ +H + +
Sbjct: 123 DHSDVMAIRQTGVAMLCASNAQEAQDLAAIATFSALQCR--LPFVHFFDGFLTSHAITQI 180
Query: 180 EIPDQEVVDEFLGEYEPKHAYLD-------PKRPITQGTLAFPAHYMEARYLVWEAMENA 232
E +E + L P A +D P RP +G A P Y + R ++
Sbjct: 181 EPLSEEALSALL----PMPALVDFRTRVLTPDRPTLRGATADPDSYFQCREAQTPYHQST 236
Query: 233 RKVIDEAFAEFEKKFGRKYQKIEEYRTDDAEIIFVTMGSLAGTLKDWVDKKREEGYKVGA 292
+ + FE + GR+YQ E A+ + V MGS T+K V ++G ++G
Sbjct: 237 PEQVQNIMDCFETQTGRRYQLAEYIGHPQAQSVIVAMGSSVDTIKQVVLAGVQQGERIGV 296
Query: 293 AKMTVYRPFPVEEIRELAKKTKV-LAFIEKDISMGLYG-AVFTDASAALINESEKPLML 349
++ +YRPFP + +R+ T ++ +++ G +G ++ D +AL + + L
Sbjct: 297 IQIRLYRPFPSQALRDALPATVTHISVLDRTKEPGSHGEPLYLDVLSALYTQRANSIRL 355
>pir||B70400 ferredoxin oxidoreductase alpha subunit - Aquifex aeolicus
>gi|2983615|gb|AAC07184.1| (AE000726) ferredoxin
oxidoreductase alpha subunit [Aquifex aeolicus]
Length = 389
Score = 129 bits (322), Expect = 4e-29
Identities = 103/378 (27%), Positives = 166/378 (43%), Gaps = 32/378 (8%)
Query: 10 NEAAAWAAKLAKPKVIAAFPITPSTLVPEKISEFVANGELDAEFIKVESEHSAISALVGA 69
++A A A K A V A+PITP + + + A G + ++ + E E+ A+SA+ GA
Sbjct: 26 SQAFAEAVKRANVDVAIAYPITPQSETMHLVGDLYAQGYVK-DYYRAEEEYGAMSAIAGA 84
Query: 70 SAAGVRTFTATASQGLALMHEVLFIAAGMRLPIVMAIGNRALSAPINIWNDWQDTISQRD 129
G R FTAT+ GL E + G R+P V+ + R ++AP++I D + +
Sbjct: 85 VRGGARAFTATSGPGLLRGLEAIVSWPGHRIPAVLGVMTRVVNAPLSIQPDNVEISYLLN 144
Query: 130 TGWIQFYAENNQEALDLILLAYKVAEDERVLLPAMVGFDAFILTHTVEPVEIPDQEVV-- 187
+G + +AEN Q+ D L + ++E V LP +V + F +TH VE+P +++
Sbjct: 145 SGLVVLHAENQQDVFDFTLAGFVISEKVDVYLPVVVATEGFFVTHAKGYVELPPEDMKLP 204
Query: 188 --DEFLGEYEPKHAYLDPKR-----PITQGTLAFPAHYMEARYLVWEAMENARKVIDEAF 240
D + P + P R P+ + + + VW A A K I
Sbjct: 205 PRDPYKAPVPPTDCEIPPARIQRDAPVQKSNFMSYLIHAVWQQEVWSANRRAAKWIKHYL 264
Query: 241 AEFEKKFGRKYQKIEEYRTDDAEIIFVTMGSLAGTLKDWVDKKREEGYKVGAAKMTVYRP 300
+ E DAE+ V G A ++ EG VG K+ RP
Sbjct: 265 G-----------GLIEVVNPDAEVFVVASGCAAAQGREAQRYATMEGLNVGLIKVKSLRP 313
Query: 301 FPVEEIRELAKKTKVLAFIEKDISMGLYGAVFTDASAALINESEKPLMLDFIAGLGGR-- 358
FPV+EIRE K K + E +I G + + AA+ N +++D GG
Sbjct: 314 FPVDEIREALKNAKAVIVPEHNI----VGWLAKEVKAAIPNSG---IVVDGPRVYGGMTL 366
Query: 359 --DVTFNQLDEALSIAKE 374
++ ++ +A I KE
Sbjct: 367 PVELIMEEIYKAFGIKKE 384
>sp|Q06879|NIFJ_ANASP PYRUVATE-FLAVODOXIN OXIDOREDUCTASE >gi|2126544|pir||I39613 pyruvate
(flavodoxin) dehydrogenase nifJ (EC 1.2.99.-) - Anabaena
sp >gi|289139|gb|AAC36818.1| (L14925) nitrogen fixation
protein [Anabaena sp.]
Length = 1197
Score = 123 bits (307), Expect = 2e-27
Identities = 104/359 (28%), Positives = 173/359 (47%), Gaps = 29/359 (8%)
Query: 10 NEAAAWAAKLAKPKVIAAFPITPSTLVPEKISEFVANGELDA-----EFIKVESEHSAIS 64
NEA A A +VIA +PITPS+ + E ++A G + ++++SE A
Sbjct: 11 NEAVARVAYKLN-EVIAIYPITPSSAMGEWADAWMAEGRPNLWGTVPSVVQMQSEGGAAG 69
Query: 65 ALVGASAAGVRTFTATASQGLALMHEVLFIAAGMRLPIVMAIGNRALSA-PINIWNDWQD 123
A+ GA G + T TASQGL LM L+ G +V+ + R+L+ ++I+ D D
Sbjct: 70 AVHGALQTGSLSTTFTASQGLLLMIPNLYKIGGELTSMVVHVAARSLATHALSIFGDHSD 129
Query: 124 TISQRDTGWIQFYAENNQEALDLILLAYKVAEDERVLLPAMVGFDAFILTHTVEPVEIPD 183
++ R TG+ + + QE+ D L+A+ D RV + FD F +H V+ VE+
Sbjct: 130 VMAARGTGFAMLCSASVQESHDFALIAHAATLDTRVSF--LHFFDGFRTSHEVQKVELLA 187
Query: 184 QEVVDEFLGE---YEPKHAYLDPKRPITQGTLAFPAHYMEAR------YLVWEAMENARK 234
+ V + E + + L P P+ +GT P + +AR Y A+ +
Sbjct: 188 DDDVRSLINEDKIFAHRARALTPDSPLLRGTAQNPDVFFQAREGANPYYNACPAI--VQG 245
Query: 235 VIDEAFAEFEKKFGRKYQKIEEYRTDDAEIIFVTMGSLAGTLKDWVDKKREEGYKVGAAK 294
++D+ F E + GR YQ E + DA+ + + MGS T+ + VD G KVG K
Sbjct: 246 IMDKFFGE---RTGRYYQIYEYHGASDADRLIIIMGSGCETVHETVDYLNARGEKVGVLK 302
Query: 295 MTVYRPFPVEE-IRELAKKTKVLAFIEKDISMG-----LYGAVFTDASAALINESEKPL 347
+ ++RP+ VE ++ L + +A +++ G LY V T +N++ P+
Sbjct: 303 VRLFRPWDVERFVQALPHSVQAIAVLDRTKEPGSAGEPLYQDVVTAIHEGWVNKNNSPV 361
>gb|AAD55754.1|AF132546_1 (AF132546) pyruvate:ferredoxin oxidoreductase [Spironucleus
barkhanus]
Length = 1182
Score = 119 bits (296), Expect = 5e-26
Identities = 89/289 (30%), Positives = 145/289 (49%), Gaps = 13/289 (4%)
Query: 28 FPITPSTLVPEKISEFVANGELDA-----EFIKVESEHSAISALVGASAAGVRTFTATAS 82
FPI+PS+ + E + E+ + G L+A ++ E A AL GA G + T TAS
Sbjct: 21 FPISPSSPMAELVDEWASKGRLNAFDQVHRVTELNHEGGAAGALHGALLNGSLSSTYTAS 80
Query: 83 QGLALMHEVLFIAAGMRLPIVMAIGNRALSA-PINIWNDWQDTISQRDTGWIQFYAENNQ 141
QGL LM L+ A LP V+ + R ++ ++I D D ++ + TG + + Q
Sbjct: 81 QGLLLMIPNLYKMAAEHLPGVLHVAARTIATHSLSIHGDHSDIMAIKQTGISILVSPDVQ 140
Query: 142 EALDLILLAYKVAEDERVLLPAMVGFDAFILTHTVEPVEIPDQEVVDEFLGEYEP----K 197
EA+D L+A+ A + P + FD + +HT++ VE+ + + F+ YE +
Sbjct: 141 EAMDFALVAHIAAINADT--PFIHAFDGYRTSHTIKKVEVISYDKIKPFV-PYEKIAEFR 197
Query: 198 HAYLDPKRPITQGTLAFPAHYMEARYLVWEAMENARKVIDEAFAEFEKKFGRKYQKIEEY 257
H L+ +RP G+ P +M+++ ++AF EK GRKY+ I+ +
Sbjct: 198 HKSLNSQRPEAYGSCMGPPVWMQSQEADNLHYSKILGHFEDAFVTVEKITGRKYEVIQYH 257
Query: 258 RTDDAEIIFVTMGSLAGTLKDWVDKKREEGYKVGAAKMTVYRPFPVEEI 306
DA + V MGS T+++ VD +G KVGA + ++RPFP I
Sbjct: 258 GCADATDVIVIMGSGCITVRETVDYLNAQGRKVGAIFINLFRPFPSAHI 306
>dbj|BAB12024.1| (AB021127) pyruvate:NADP+ oxidoreductase [Euglena gracilis]
Length = 1803
Score = 115 bits (286), Expect = 7e-25
Identities = 98/345 (28%), Positives = 165/345 (47%), Gaps = 15/345 (4%)
Query: 28 FPITPSTLVPEKISEFVANGELDA-----EFIKVESEHSAISALVGASAAGVRTFTATAS 82
+PITPS+++ E ++A G +A + +++SE A AL GA AAG T TAS
Sbjct: 92 YPITPSSVMGELADVWMAQGRKNAFGQVVDVREMQSEAGAAGALHGALAAGAIATTFTAS 151
Query: 83 QGLALMHEVLFIAAGMRLPIVMAIGNRALSA-PINIWNDWQDTISQRDTGWIQFYAENNQ 141
QGL LM ++ AG +P V+ + R L+ ++I+ D ++ R TGW + Q
Sbjct: 152 QGLLLMIPNMYKIAGELMPSVIHVAARELAGHALSIFGGHADVMAVRQTGWAMLCSHTVQ 211
Query: 142 EALDLILLAYKVAEDERVLLPAMVGFDAFILTHTVEPVEIPDQEVVDEFL--GEYEPKHA 199
++ D+ L+++ + P + FD F +H V +++ + + + G E A
Sbjct: 212 QSHDMALISHVATLKSSI--PFVHFFDGFRTSHEVNKIKMLPYAELKKLVPPGTMEQHWA 269
Query: 200 Y-LDPKRPITQGTLAFPAHYMEARYLVWEAMENARKVIDEAFAEFEKKFGRKYQKIEEYR 258
L+P P +GT Y + + + +V+ E E GR Y+ E
Sbjct: 270 RSLNPMHPTIRGTNQSADIYFQNMESANQYYTDLAEVVQETMDEVAPYIGRHYKIFEYVG 329
Query: 259 TDDAEIIFVTMGSLAGTLKDWVDKKREEGYKVGAAKMTVYRPFPVEEIRELAKKT-KVLA 317
DAE + V MGS A T+ + VD + G KVGA + +YRP+ + ++ KT K +A
Sbjct: 330 APDAEEVTVLMGSGATTVNEAVDLLVKRGKKVGAVLVHLYRPWSTKAFEKVLPKTVKRIA 389
Query: 318 FIEKDISMGLYG-AVFTDASAA--LINESEKPLMLDFIAGLGGRD 359
+++ + G ++ D SA L E + ++ GLG +D
Sbjct: 390 ALDRCKEVTALGEPLYLDVSATLNLFPERQNVKVIGGRYGLGSKD 434
>gb|AAB49653.1| (U30149) pyruvate:ferredoxin oxidoreductase [Entamoeba histolytica]
Length = 1162
Score = 115 bits (285), Expect = 9e-25
Identities = 100/386 (25%), Positives = 176/386 (44%), Gaps = 21/386 (5%)
Query: 10 NEAAAWAAKLAKPKVIAAFPITPSTLVPEKISEFVANGELDA-----EFIKVESEHSAIS 64
N+AAA+ + A V FPITPS+ + E + + G + + ++ESE A
Sbjct: 7 NQAAAYVS-YALSDVSFIFPITPSSPMAENADVWSSQGRKNVFGQVVDVYEMESEAGASG 65
Query: 65 ALVGASAAGVRTFTATASQGLALMHEVLFIAAGMRLPIVMAIGNRALSAP-INIWNDWQD 123
A+ G AAG T T SQGL LM + AG LP V + RAL+ ++I+ D D
Sbjct: 66 AVHGGCAAGSLVSTYTCSQGLMLMIPNMIKIAGEHLPCVFHVTARALAGQALSIFGDHSD 125
Query: 124 TISQRDTGWIQFYAENNQEALDLILLAYKVAEDERVLLPAMVGFDAFILTHTVEPVEIPD 183
++ R TG+ + N Q+ DL ++A+ + LP M FD F +H ++ +
Sbjct: 126 VMACRSTGFCLLSSHNVQQCHDLAIVAHLATLEAS--LPFMHFFDGFRTSHEIQKIHQLT 183
Query: 184 QEVVDEFLGEYEPKHAY---LDPKRPITQGTLAFPAHYMEARYLVWEAMENARKVIDEAF 240
+ + + A+ L+P P +GT P + +A +++ +
Sbjct: 184 YDQIKSLVDMKYVDRAHKRGLNPIHPSQRGTSQGPDVFFQAVEKSNADYLKVPEIVQKYM 243
Query: 241 AEFEKKFGRKYQKIEEYRTDDAEIIFVTMGSLAGTLKDWVDKKREEGYKVGAAKMTVYRP 300
+ + GR Y+ E Y DAE + V MG+ L++ VD + G KVG + +YRP
Sbjct: 244 DKVGELTGRHYKIFEYYGAADAERVVVVMGAAVPVLEECVDYLMKSGEKVGVLSVHLYRP 303
Query: 301 FPVEE-IRELAKKTKVLAFIEKDISMGLYG-AVFTDASAALINESEKPLMLDFIAGLGGR 358
+ + + +L ++ +++ G +G ++ D + L++ + + GLG +
Sbjct: 304 WSAKHFLEQLPNTVTKISVLDRTKEAGSFGEPLYLDVATTLLDAGKHIKCVGGRYGLGSK 363
Query: 359 DVTFNQLDEALSIAKEALEKGKVEKP 384
+ T ++AK + K E+P
Sbjct: 364 EFT-------PAMAKAVFDNLKNEEP 382
>sp|Q53046|NIFJ_RHORU PYRUVATE-FLAVODOXIN OXIDOREDUCTASE >gi|628896|pir||S41961 pyruvate
oxidoreductase - Rhodospirillum rubrum
>gi|453436|emb|CAA54651.1| (X77515) pyruvate
oxidoreductase [Rhodospirillum rubrum]
Length = 1191
Score = 113 bits (280), Expect = 4e-24
Identities = 101/363 (27%), Positives = 165/363 (44%), Gaps = 18/363 (4%)
Query: 10 NEAAAWAAKLAKPKVIAAFPITPSTLVPEKISEFVANGELDA-----EFIKVESEHSAIS 64
NEA A A +V +PITPS+ + E E+ A G + + ++++SE A
Sbjct: 12 NEACASVAYRVS-EVAVIYPITPSSTMGELSDEWSAKGLTNIWGAVPQVVEMQSEGGAAG 70
Query: 65 ALVGASAAGVRTFTATASQGLALMHEVLFIAAGMRLPIVMAIGNRALSA-PINIWNDWQD 123
A GA G T TASQGL LM ++ AG P M + R L+ ++I+ D D
Sbjct: 71 ACHGAIQTGSLGTTFTASQGLLLMIPNMYKIAGELTPFCMHVTARTLATHALSIFGDQSD 130
Query: 124 TISQRDTGWIQFYAENNQEALDLILLAYKVAEDERVLLPAMVGFDAFILTHTVEPVEIPD 183
++ R TG+ + + QEA DL +A+ + + R+ P + FD F +H V +E+
Sbjct: 131 VMACRQTGFAILASASVQEAHDLASVAHGASLESRI--PFLHFFDGFRTSHEVNKIELMT 188
Query: 184 QE----VVDEFLGEYEPKHAYLDPKRPITQGTLAFPAHYMEARYLVWEAMENARKVIDEA 239
+ ++D+ L A L P P+T+GT P + +A+ + ++
Sbjct: 189 DDDLHAMIDDDLVAAHRARA-LTPDTPVTRGTAQNPDTFFQAQEARNPFYDACPAIVQSY 247
Query: 240 FAEFEKKFGRKYQKIEEYRTDDAEIIFVTMGSLAGTLKDWVDKKREEGYKVGAAKMTVYR 299
GR+Y + AE + V MGS A T+ + VD G K+G K+ ++R
Sbjct: 248 MDRLAALTGRRYGLFDYVGHPQAERVVVIMGSGAETVAETVDWLVARGEKIGVVKVRLFR 307
Query: 300 PFPVEE-IRELAKKTKVLAFIEKDISMGLYG-AVFTDASAALINESEKPLMLDFI--AGL 355
PF V+ + L + +A +++ G G ++ D AL L + A +
Sbjct: 308 PFSVDAFVAALPVSVRAIAVLDRCKESGAIGEPLYLDVVGALARAKALGLRAGIVDPAVI 367
Query: 356 GGR 358
GGR
Sbjct: 368 GGR 370
>pir||S70963 pyruvate (flavodoxin) dehydrogenase (EC 1.2.99.-) - Rhodospirillum
rubrum
Length = 1191
Score = 113 bits (280), Expect = 4e-24
Identities = 101/363 (27%), Positives = 165/363 (44%), Gaps = 18/363 (4%)
Query: 10 NEAAAWAAKLAKPKVIAAFPITPSTLVPEKISEFVANGELDA-----EFIKVESEHSAIS 64
NEA A A +V +PITPS+ + E E+ A G + + ++++SE A
Sbjct: 12 NEACASVAYRVS-EVAVIYPITPSSTMGELSDEWSAKGLTNIWGAVPQVVEMQSEGGAAG 70
Query: 65 ALVGASAAGVRTFTATASQGLALMHEVLFIAAGMRLPIVMAIGNRALSA-PINIWNDWQD 123
A GA G T TASQGL LM ++ AG P M + R L+ ++I+ D D
Sbjct: 71 ACHGAIQTGSLGTTFTASQGLLLMIPNMYKIAGELTPFCMHVTARTLATHALSIFGDQSD 130
Query: 124 TISQRDTGWIQFYAENNQEALDLILLAYKVAEDERVLLPAMVGFDAFILTHTVEPVEIPD 183
++ R TG+ + + QEA DL +A+ + + R+ P + FD F +H V +E+
Sbjct: 131 VMACRQTGFAILASASVQEAHDLASVAHGASLESRI--PFLHFFDGFRTSHEVNKIELMT 188
Query: 184 QE----VVDEFLGEYEPKHAYLDPKRPITQGTLAFPAHYMEARYLVWEAMENARKVIDEA 239
+ ++D+ L A L P P+T+GT P + +A+ + ++
Sbjct: 189 DDDLHAMIDDDLVAAHRARA-LTPDTPVTRGTAQNPDTFFQAQEARNPFYDACPAIVQSY 247
Query: 240 FAEFEKKFGRKYQKIEEYRTDDAEIIFVTMGSLAGTLKDWVDKKREEGYKVGAAKMTVYR 299
GR+Y + AE + V MGS A T+ + VD G K+G K+ ++R
Sbjct: 248 MDRLAALTGRRYGLFDYVGHPQAERVVVIMGSGAETVAETVDWLVARGEKIGVVKVRLFR 307
Query: 300 PFPVEE-IRELAKKTKVLAFIEKDISMGLYG-AVFTDASAALINESEKPLMLDFI--AGL 355
PF V+ + L + +A +++ G G ++ D AL L + A +
Sbjct: 308 PFSVDAFVAALPVSVRAIAVLDRCKESGAIGEPLYLDVVGALARAKALGLRAGIVDPAVI 367
Query: 356 GGR 358
GGR
Sbjct: 368 GGR 370
>pir||H72214 hypothetical protein TM1759 - Thermotoga maritima (strain MSB8)
>gi|4982338|gb|AAD36824.1|AE001814_6 (AE001814)
2-oxoisovalerate oxidoreductase, beta subunit, putative
[Thermotoga maritima]
Length = 356
Score = 112 bits (277), Expect = 8e-24
Identities = 100/343 (29%), Positives = 155/343 (45%), Gaps = 36/343 (10%)
Query: 4 RTVMKANEAAAWAAKLAKPKVIAAFPITPSTLVPEKISEFVANG--ELDAEFIKVESEHS 61
+ +MK NEA A +A A ++ A+PITP + +I+E++A E+ F++ ESE +
Sbjct: 6 KLMMKGNEAIAESAIRAGCRLYFAYPITPQS----EIAEYMARRLPEVGGVFLQTESEIA 61
Query: 62 AISALVGASAAGVRTFTATASQGLALMHEVLFIAAGMRLPIVMAIGNRALSAPINIWNDW 121
++ + GA+ G R T+T+S G +LM E + AG LP V R NI
Sbjct: 62 TVNMVYGAACTGKRVMTSTSSPGFSLMQEGISYIAGAELPCVFVDVVRGGPGLGNIQPSQ 121
Query: 122 QDTIS------QRDTGWIQFYAENNQEALDLILLAYKVAEDERVLLPAMVGFDAFILTHT 175
D D I QEA+DL LA+ +A+ R P ++ D I
Sbjct: 122 GDYFQAVKGGGHGDYRLIVLAPSTLQEAVDLTQLAFDLAD--RYRNPVLILADGMI-GQM 178
Query: 176 VEPVEIPDQEVVDEFLGEYEPKHAYLDPKRPITQGTLAFPAHYMEARYLVWEAMENARKV 235
+EPVE+P+ + P H+ +G H + A + +E K
Sbjct: 179 MEPVELPEMRDLSTL-----PDHSDW-----ALRGARNREPHRIAAFNIDPVGLEKMNKR 228
Query: 236 IDEAFAEFEKKFGRKYQKIEEYRTDDAEIIFVTMGSLAGTLKDWVDKKREEGYKVGAAKM 295
+ E + E Q+ EEYR D AE + V G++ LK VD REEG G +
Sbjct: 229 LQEKYRLIEAS----EQRWEEYRVDGAEYLMVGYGTMGRILKSVVDSLREEGIPAGLFRP 284
Query: 296 TVYRPFPVEEIRELAKKTKVLAFIE-------KDISMGLYGAV 331
PFP ++ELAKK +++ +E +D+ + + G V
Sbjct: 285 VTLWPFPKRRLKELAKKVQLIFVVEMSSGQMVEDVQISVEGKV 327
>pir||T43259 pyruvate (flavodoxin) dehydrogenase (EC 1.2.99.-) pfoB precursor,
hydrogenosomal - Trichomonas vaginalis
>gi|622960|gb|AAA85495.1| (U16823) pyruvate:ferredoxin
oxidoreductase proprotein [Trichomonas vaginalis]
Length = 1157
Score = 111 bits (276), Expect = 1e-23
Identities = 97/335 (28%), Positives = 156/335 (45%), Gaps = 33/335 (9%)
Query: 28 FPITPSTLVPEKISEFVANGELDAEFIKV-----ESEHSAISALVGASAAGVRTFTATAS 82
+PITP+T + E + ++A G + KV +SE A +A+ GA+A G T TAS
Sbjct: 31 YPITPATTMGELVDAWIAQGRKNIWGNKVNMAMMQSEGGAAAAVHGATAVGALCATFTAS 90
Query: 83 QGLALMHEVLFIAAGMRLPIVMAIGNRAL-SAPINIWNDWQDTISQRDTGWIQFYAENNQ 141
QG LM ++ G P V I R + ++ ++I+ND D + R TG ++ Q
Sbjct: 91 QGALLMIPDMYKIVGEMCPAVFHIAARCIATSALSIYNDHGDIYACRATGMPILFSNGVQ 150
Query: 142 EALDLILLAYKVAEDERVLLPAMVGFDAFILTHTVEPVEIPDQEVV-----DEFLGEYEP 196
EA DL +A+ + LP + FD F +H + E D E + + L +
Sbjct: 151 EAHDLAAVAHLTS--IHTGLPFIHTFDGFRTSHEINTYEELDNETLWPLIDQKALAAFRA 208
Query: 197 KHAYLDPKRPITQGTLAFPAHYMEARYLVWEAMENARKVIDEAFAEFEK-------KFGR 249
+ L+P+ P +GT+ P + VW+ E RK AE EK K GR
Sbjct: 209 RS--LNPEHPSERGTICGPEY-------VWQMHEKLRKPYQALPAEVEKMMKALGDKTGR 259
Query: 250 KYQKIEEYRTDDAEIIFVTMGSLAGTLKDWVDKKREEGYKVGAAKMTVYRPFPVEEIR-E 308
Y+ + D E + + MGS +++++ + E YK G K+ +YRPF VE
Sbjct: 260 YYKPYQYAGPRDPENVIIMMGSGCDPVEEFITEHPE--YKTGLIKVYLYRPFSVEMFNAA 317
Query: 309 LAKKTKVLAFIEKDIS-MGLYGAVFTDASAALINE 342
+ K + ++K + G +F D +AA+I +
Sbjct: 318 IPSSVKRVCVLDKVVDPTGPREPLFEDVAAAIIGQ 352
>pir||S58236 pyruvate (flavodoxin) dehydrogenase (EC 1.2.99.-) - Entamoeba
histolytica >gi|929587|emb|CAA90575.1| (Z50193) pyruvate
oxidoreductase [Entamoeba histolytica]
Length = 1165
Score = 109 bits (271), Expect = 4e-23
Identities = 102/391 (26%), Positives = 181/391 (46%), Gaps = 28/391 (7%)
Query: 10 NEAAAWAAKLAKPKVIAAFPITPSTLVPEKISEFVANGELDA-----EFIKVESEHSAIS 64
N+AAA+ + A V FPITPS+ + E + + G + + ++ESE A
Sbjct: 7 NQAAAYVS-YALSDVSFIFPITPSSPMAENADVWSSQGRKNVFGQVVDVYEMESEAGASG 65
Query: 65 ALVGASAAGVRTFTATASQGLALMHEVLFIAAGMRLPIVMAIGNRALS-APINIWNDWQD 123
A+ G AAG T T SQGL LM + AG LP V + RAL+ ++I+ D D
Sbjct: 66 AVHGGCAAGSLVSTYTCSQGLMLMIPNMIKIAGEHLPCVFHVTARALAEQALSIFGDHSD 125
Query: 124 TISQRDTGWIQFYAENNQEALDLILLAYKVAEDERVLLPAMVGFDAFILTHTVEPVEIPD 183
++ R TG+ + N Q+ DL ++A+ + LP M FD F +H ++ +
Sbjct: 126 VMACRSTGFCLLSSHNVQQCHDLAIVAHLATLE--ASLPFMHFFDGFRTSHEIQKIHQLT 183
Query: 184 QEVVDEFLGEYEPKHAY---LDPKRPITQGTLAFPAHYMEARYLVWEAMENAR--KVIDE 238
+ + + A+ L+P P +GT P + + + + + +++ +
Sbjct: 184 YDQIKSLVDMKYVDRAHKRGLNPIHPSQRGTSQGPDVILPSLLKIKSNADYLKVPEIVQK 243
Query: 239 AFAEFEKKFGRKYQKIEEYRTDDAEIIFVTMGSLAGTLKDWVD---KKREEGYKVGAAKM 295
+ + GR Y+ E Y DAE + V MG+ L++ VD K+ EE KVG +
Sbjct: 244 YMDKVGELTGRHYKIFEYYGAADAERVVVVMGAAVPVLEECVDYLMKELEE--KVGVLSV 301
Query: 296 TVYRPFPVEE-IRELAKKTKVLAFIEKDISMGLYG-AVFTDASAALINESEKPLMLDFIA 353
+YRP+ + + +L ++ +++ GL+G ++ D + L++ + +
Sbjct: 302 HLYRPWSAKHFLEQLPNTVTKISVLDRTKEAGLFGEPLYLDVATTLLDAGKHIKCVGGRY 361
Query: 354 GLGGRDVTFNQLDEALSIAKEALEKGKVEKP 384
GLG ++ T ++AK + K E+P
Sbjct: 362 GLGSKEFT-------PAMAKAVFDNLKNEEP 385
>pir||T43258 pyruvate (flavodoxin) dehydrogenase (EC 1.2.99.-) pfoA precursor,
hydrogenosomal - Trichomonas vaginalis
>gi|622958|gb|AAA85494.1| (U16822) pyruvate:ferredoxin
oxidoreductas proprotein [Trichomonas vaginalis]
Length = 1157
Score = 109 bits (270), Expect = 5e-23
Identities = 96/335 (28%), Positives = 154/335 (45%), Gaps = 33/335 (9%)
Query: 28 FPITPSTLVPEKISEFVANGELDAEFIKV-----ESEHSAISALVGASAAGVRTFTATAS 82
+PITP+T + E + ++A G + KV +SE A +A+ GA+A G T TAS
Sbjct: 31 YPITPATTMGELVDAWIAQGRKNIWGNKVHMAMMQSEGGAAAAVHGATAVGALCATFTAS 90
Query: 83 QGLALMHEVLFIAAGMRLPIVMAIGNRAL-SAPINIWNDWQDTISQRDTGWIQFYAENNQ 141
QG LM ++ G P V I R + ++ ++I+ND D + R TG ++ Q
Sbjct: 91 QGALLMIPDMYKIIGEMCPAVFHISARCIATSALSIYNDHGDIYACRATGMPILFSNGVQ 150
Query: 142 EALDLILLAYKVAEDERVLLPAMVGFDAFILTHTVEPVEIPDQEVV-----DEFLGEYEP 196
EA DL +A+ LP + FD F +H + E D E + + L +
Sbjct: 151 EAHDLAAVAHLTT--IHTGLPFIHTFDGFRTSHEINTYEELDNETLWPLIDQKALAAFRA 208
Query: 197 KHAYLDPKRPITQGTLAFPAHYMEARYLVWEAMENARKVIDEAFAEFEK-------KFGR 249
+ L+P+ P +GT+ P + VW+ E RK E EK K GR
Sbjct: 209 RS--LNPEHPSERGTICGPEY-------VWQMHEKLRKPFQALPTEVEKMMKALGDKTGR 259
Query: 250 KYQKIEEYRTDDAEIIFVTMGSLAGTLKDWVDKKREEGYKVGAAKMTVYRPFPVEEIR-E 308
Y+ + D E + + MGS +++++ + E +K G K+ ++RPF VE
Sbjct: 260 YYKPYQYAGPRDPENVIIMMGSGCDPVEEYITEHPE--FKTGLIKVHLFRPFSVEMFNAA 317
Query: 309 LAKKTKVLAFIEKDIS-MGLYGAVFTDASAALINE 342
+ K + ++K + G +F D +AALI E
Sbjct: 318 IPASVKKICVLDKVVDPTGPREPLFEDVAAALIGE 352
>pir||C75168 2-ketoglutarate ferredoxin oxidoreductase, chain alpha (kora-1)
PAB2359 - Pyrococcus abyssi (strain Orsay)
>gi|5457936|emb|CAB49426.1| (AJ248284) 2-ketoglutarate
ferredoxin oxidoreductase, subunit alpha (korA-1)
[Pyrococcus abyssi]
Length = 408
Score = 108 bits (266), Expect = 2e-22
Identities = 102/337 (30%), Positives = 155/337 (45%), Gaps = 26/337 (7%)
Query: 7 MKANEAAAWAAKLAKPKVIAAFPITPSTLVPEKISEFVANGELDAEFIKVESEHSAISAL 66
M +EA A+ A A + A +PITPS+ + E ++ + ++ ++++E E ++I+A+
Sbjct: 37 MMGDEAVAYGAIFAGCRFYAGYPITPSSEIAETMARELP--KVGGYYLQMEDEIASIAAM 94
Query: 67 VGASAAGVRTFTATASQGLALMHEVLFIAAGMRLPIVMAIGNRALSAPINIWNDWQDTIS 126
VGAS G++ TAT+ G +LM E L A P+V+ R+ + Q
Sbjct: 95 VGASWTGLKVMTATSGPGFSLMQENLGYAVMTETPLVLVDVQRSGPSTGQATKGAQGDFF 154
Query: 127 QRDTGW------IQFYAENNQEALDLILLAYKVAEDERVLLPAMVGFDAFILTHTVEPVE 180
Q G + + ++A + A+ VAE R+ P +V FD IL HT E +
Sbjct: 155 QARWGTHGDHPIVAISPVSVEDAFWETIRAFNVAE--RLRTPVVVLFDG-ILGHTREQIR 211
Query: 181 IPDQ---EVVDEFLGEYEPKHAYLDPKRPITQGTLAFP--AHYMEARYLVWEAMENARKV 235
IPD E+V L + E + A L P G P H EN +
Sbjct: 212 IPDPDEVEIVYRKLPQNE-EEARLPFGDPHGDGVPPMPLFGHGYFTHVTGSTHKENGLRD 270
Query: 236 I--DEAFAEFEKKFGRK-------YQKIEEYRTDDAEIIFVTMGSLAGTLKDWVDKKREE 286
+ E + ++ RK Y+K EEY TDDAEI+ V+ G A V K R+E
Sbjct: 271 VYTQEVHDKLVRRIHRKIEQNREVYEKYEEYYTDDAEILVVSWGVSARPSLGAVLKARKE 330
Query: 287 GYKVGAAKMTVYRPFPVEEIRELAKKTKVLAFIEKDI 323
G KVG PFP E +REL KK + + E ++
Sbjct: 331 GIKVGLFVPKTVHPFPGERMRELGKKVRAILVPEMNL 367
>pir||B71047 probable ferredoxin oxidoreductase alpha subunit - Pyrococcus
horikoshii >gi|3258095|dbj|BAA30778.1| (AP000006) 408aa
long hypothetical ferredoxin oxidoreductase alpha
subunit [Pyrococcus horikoshii]
Length = 408
Score = 105 bits (259), Expect = 1e-21
Identities = 99/336 (29%), Positives = 148/336 (43%), Gaps = 24/336 (7%)
Query: 7 MKANEAAAWAAKLAKPKVIAAFPITPSTLVPEKISEFVANGELDAEFIKVESEHSAISAL 66
M +EA A+ A A + A +PITPS+ + E ++ + ++ ++++E E +I+A+
Sbjct: 37 MMGDEAIAYGAIFAGCRFYAGYPITPSSEIAETMARELP--KVGGYYLQMEDEIGSIAAM 94
Query: 67 VGASAAGVRTFTATASQGLALMHEVLFIAAGMRLPIVMAIGNRALSAPINIWNDWQDTIS 126
+GAS G++ TAT+ G +LM E + A PIV+ R+ + Q
Sbjct: 95 IGASWTGLKAMTATSGPGFSLMQENIGYAVMTETPIVVVNVQRSGPSTGQATKGAQGDFF 154
Query: 127 QR------DTGWIQFYAENNQEALDLILLAYKVAEDERVLLPAMVGFDAFILTHTVEPVE 180
Q D I + ++A + A+ +AE R P +V FD IL HT E +
Sbjct: 155 QARWGTHGDHPMIAVSPISVEDAFWETIRAFNIAEKLRT--PVIVLFDG-ILGHTREQIR 211
Query: 181 IPDQEVVDEFL-----GEYEPKHAYLDPKRPITQGTLAFPAHYMEARYLVWEAMENARKV 235
IPD + V+ E E K + DP F Y R V
Sbjct: 212 IPDPDEVEITYRKLPGSEEEAKLPFGDPHGDGVPPMPLFGHGYFTHVTGSTHKENGLRDV 271
Query: 236 -IDEAFAEFEKKFGRK-------YQKIEEYRTDDAEIIFVTMGSLAGTLKDWVDKKREEG 287
E + ++ RK Y+K EEY TDDAEI+ V+ G A V K REEG
Sbjct: 272 YTQEVHDKLVRRIHRKIEQNRDVYEKYEEYYTDDAEILVVSWGVSARPSLGAVLKAREEG 331
Query: 288 YKVGAAKMTVYRPFPVEEIRELAKKTKVLAFIEKDI 323
K G PFP E +REL KK + + E ++
Sbjct: 332 IKAGLFVPKTVHPFPGERMRELGKKVRAILVPEMNL 367
>pir||T18528 probable pyruvate (flavodoxin) dehydrogenase (EC 1.2.99.-) -
Giardia intestinalis >gi|960283|gb|AAA74894.1| (L27221)
pyruvate:ferredoxin oxidoreductase [Giardia
intestinalis]
Length = 1253
Score = 103 bits (255), Expect = 3e-21
Identities = 87/330 (26%), Positives = 157/330 (47%), Gaps = 18/330 (5%)
Query: 26 AAFPITPSTLVPEKISEFVANGELD--AEFIKVE---SEHSAISALVGASAAGVRTFTAT 80
A FPITPS+++ E I ++ A G+ + + V SE AI GA+ AG T T +
Sbjct: 31 AIFPITPSSVMAEMIEQYAAQGKKNIFGNVVTVRQAWSELGAIGTCHGAATAGALTATFS 90
Query: 81 ASQGLALMHEVLFIAAGMRLPIVMAIGNRALS-APINIWNDWQDTISQRDTGWIQFYAEN 139
+SQG+ LM L+ AG R+P V+ + R + A ++ D D + T + N
Sbjct: 91 SSQGVLLMISNLYHMAGERIPFVLHVATRTVGMAATSLATDHTDVYAIEGTNMCALSSCN 150
Query: 140 NQEALDLILLAYKVAEDERVLLPAMVGFDAFILTHTVEPVEI-PDQEVVDEFLGE----- 193
QE D+ L+A+ A + + F+ + ++H E +++ D + +FL E
Sbjct: 151 VQECYDMSLVAHTTATNVQAAFCHF--FEGYRVSHQFETIQVFKDDADIKDFLSEDQLAK 208
Query: 194 YEPKHAYLDPKRPITQGTLAFPAHYMEARYLVWEAMENARKVIDEAFAEFEKKFGRKYQK 253
+ ++A +D RPI +M+ ++ I+EAF +K GR+Y
Sbjct: 209 WRSENA-MDTDRPIASNIGLGGEIHMQIVESQGAVFDSIPYRIEEAFDLLHRKTGRRYHC 267
Query: 254 IEEYRTDDAEIIFVTMGSLAGTLKDWVDK-KREEGYKVGAAKMTVYRPFPVEEI-RELAK 311
E + +++ V MG+ + T ++ VD E +VG ++ ++RPF +E + K
Sbjct: 268 FEYFGHPTPDVVVVVMGATSLTFENVVDALVNRENRRVGFVRVRLFRPFSIELFSNAIPK 327
Query: 312 KTKVLAFIEKDIS-MGLYGAVFTDASAALI 340
KV+ +++ + G ++ + AAL+
Sbjct: 328 SAKVVVALDRAPELLNAGGTLYRETLAALM 357
>pir||A69194 2-oxoacid--ferredoxin oxidoreductase (EC 1.2.7.-) alpha chain -
Methanobacterium thermoautotrophicum (strain Delta H)
>gi|2621790|gb|AAB85209.1| (AE000849) 2-oxoisovalerate
oxidoreductase, beta subunit [Methanobacterium
thermoautotrophicum]
Length = 348
Score = 97.9 bits (240), Expect = 2e-19
Identities = 87/311 (27%), Positives = 142/311 (44%), Gaps = 27/311 (8%)
Query: 6 VMKANEAAAWAAKLAKPKVIAAFPITPSTLVPEKISEFVANGELDAEFIKVESEHSAISA 65
++K N A A A +PITP++ + + S + + +F++ ESE +AI+
Sbjct: 1 MVKGNTAVIIGAMYAGCDCYFGYPITPASEILHEASRYFPM--VGRKFVQAESEEAAINM 58
Query: 66 LVGASAAGVRTFTATASQGLALMHEVLFIAAGMRLPIVMAIGNRALSAPINI---WNDWQ 122
+ GA+AAG R TA++ G++L E + AG LP V+ RA NI D+
Sbjct: 59 VYGAAAAGHRVMTASSGPGISLKQEGISFLAGAELPAVIVDVMRAGPGLGNIGPEQGDYN 118
Query: 123 DTISQRDTGWIQ---FYAENNQEALDLILLAYKVAEDERVLLPAMVGFDAFILTHTVEPV 179
+ G + + QE DL + A+++A+ R P +V DA +L EP+
Sbjct: 119 QIVKGGGHGNYRNMVLAPSSVQEMCDLTMEAFELADKYR--NPVVVLTDA-VLGQMAEPL 175
Query: 180 EIPDQEVVDEFLGEYEPKHAYLDPKRPITQGTLAFPAHYMEARYLVWEAMENARKVIDEA 239
P++ V E+ P ++ G + + + +L ++ +E + E
Sbjct: 176 RFPEEAV------EHRPDTSW------AVCGNRETMKNLVTSIFLDFDELEEFNFYLQEK 223
Query: 240 FAEFEKKFGRKYQKIEEYRTDDAEIIFVTMGSLAGTLKDWVDKKREEGYKVGAAKMTVYR 299
+A E+ R EEY DDAEI+ V G + + V+ R EG VG +
Sbjct: 224 YARIEENEVR----YEEYLVDDAEIVMVAYGISSRVARSAVETARAEGINVGLLRPITLF 279
Query: 300 PFPVEEIRELA 310
PFP + IRELA
Sbjct: 280 PFPSDRIRELA 290
>sp|O26800|VORB_METTH KETOISOVALERATE OXIDOREDUCTASE SUBUNIT VORB (VOR) (2-OXOISOVALERATE
OXIDOREDUCTASE BETA CHAIN) (2-OXOISOVALERATE-FERREDOXIN
OXIDOREDUCTASE BETA SUBUNIT)
Length = 352
Score = 97.9 bits (240), Expect = 2e-19
Identities = 87/311 (27%), Positives = 142/311 (44%), Gaps = 27/311 (8%)
Query: 6 VMKANEAAAWAAKLAKPKVIAAFPITPSTLVPEKISEFVANGELDAEFIKVESEHSAISA 65
++K N A A A +PITP++ + + S + + +F++ ESE +AI+
Sbjct: 5 MVKGNTAVIIGAMYAGCDCYFGYPITPASEILHEASRYFPM--VGRKFVQAESEEAAINM 62
Query: 66 LVGASAAGVRTFTATASQGLALMHEVLFIAAGMRLPIVMAIGNRALSAPINI---WNDWQ 122
+ GA+AAG R TA++ G++L E + AG LP V+ RA NI D+
Sbjct: 63 VYGAAAAGHRVMTASSGPGISLKQEGISFLAGAELPAVIVDVMRAGPGLGNIGPEQGDYN 122
Query: 123 DTISQRDTGWIQ---FYAENNQEALDLILLAYKVAEDERVLLPAMVGFDAFILTHTVEPV 179
+ G + + QE DL + A+++A+ R P +V DA +L EP+
Sbjct: 123 QIVKGGGHGNYRNMVLAPSSVQEMCDLTMEAFELADKYR--NPVVVLTDA-VLGQMAEPL 179
Query: 180 EIPDQEVVDEFLGEYEPKHAYLDPKRPITQGTLAFPAHYMEARYLVWEAMENARKVIDEA 239
P++ V E+ P ++ G + + + +L ++ +E + E
Sbjct: 180 RFPEEAV------EHRPDTSW------AVCGNRETMKNLVTSIFLDFDELEEFNFYLQEK 227
Query: 240 FAEFEKKFGRKYQKIEEYRTDDAEIIFVTMGSLAGTLKDWVDKKREEGYKVGAAKMTVYR 299
+A E+ R EEY DDAEI+ V G + + V+ R EG VG +
Sbjct: 228 YARIEENEVR----YEEYLVDDAEIVMVAYGISSRVARSAVETARAEGINVGLLRPITLF 283
Query: 300 PFPVEEIRELA 310
PFP + IRELA
Sbjct: 284 PFPSDRIRELA 294
>pir||H69004 2-oxoglutarate--ferredoxin oxidoreductase (EC 1.2.7.-) alpha chain
- Methanobacterium thermoautotrophicum (strain Delta H)
>gi|2622136|gb|AAB85529.1| (AE000875) 2-oxoglutarate
oxidoreductase, alpha subunit [Methanobacterium
thermoautotrophicum]
Length = 378
Score = 94.4 bits (231), Expect = 2e-18
Identities = 89/339 (26%), Positives = 148/339 (43%), Gaps = 23/339 (6%)
Query: 7 MKANEAAAWAAKLAKPKVIAAFPITPSTLVPEKISEFVANGELDAEFIKVESEHSAISAL 66
++ N+A A A A + A +PITPST + E+++ + F+++E E A+ A+
Sbjct: 9 IQGNDACARGAIKAGCRFFAGYPITPSTEIAEEMALLLPRE--GGVFVQMEDEIGALGAV 66
Query: 67 VGASAAGVRTFTATASQGLALMHEVLFIAAGMRLPIVMAIGNRALSAPINIWNDWQDTIS 126
+GA +GVR TAT+ G +LM E + AA P+V+ R + Q +
Sbjct: 67 IGAVWSGVRGMTATSGPGFSLMQEHVGYAAMTETPLVIVNVQRGSPSTGQPTMASQSDMM 126
Query: 127 QRDTGW------IQFYAENNQEALDLILLAYKVAEDERVLLPAMVGFDAFILTHTVEPVE 180
Q G I + QE D + A+ +AE+ RV P MV D I+ H E +
Sbjct: 127 QARWGSHGDYEIIALSPSSVQECFDFTVRAFNLAEEYRV--PVMVMGDE-IVGHMREKIT 183
Query: 181 IPDQEVVDEFLGEYEPKHAYLDPKRPITQGTLAFPAHYMEARYLVWEAMENARKVIDEAF 240
IPD+ + + G P +L P G PA R V + D +
Sbjct: 184 IPDRVKIRKRRGPSVPPEEFLPFSAP-EDGVPEMPAFGDGYRIPVTGLTHDEGGYPDASN 242
Query: 241 AEFEKKFGRKY-----------QKIEEYRTDDAEIIFVTMGSLAGTLKDWVDKKREEGYK 289
E + ++ ++E T+DA I ++ G+ + ++ V RE+G +
Sbjct: 243 PEGHHRLVKRLCDKILRHRDRISDVQEELTEDAYITVISYGAPSRSVATAVKMAREDGVR 302
Query: 290 VGAAKMTVYRPFPVEEIRELAKKTKVLAFIEKDISMGLY 328
G K+ PFP E+R A+++ L +E ++ Y
Sbjct: 303 AGYLKINTPWPFPETEVRAAAERSGKLLVVEMNLGQMFY 341
>sp|O27112|KORA_METTH 2-OXOGLUTARATE SYNTHASE SUBUNIT KORA (2-KETOGLUTARATE
OXIDOREDUCTASE ALPHA CHAIN) (KOR)
(2-OXOGLUTARATE-FERREDOXIN OXIDOREDUCTASE ALPHA SUBUNIT)
Length = 376
Score = 94.4 bits (231), Expect = 2e-18
Identities = 89/339 (26%), Positives = 148/339 (43%), Gaps = 23/339 (6%)
Query: 7 MKANEAAAWAAKLAKPKVIAAFPITPSTLVPEKISEFVANGELDAEFIKVESEHSAISAL 66
++ N+A A A A + A +PITPST + E+++ + F+++E E A+ A+
Sbjct: 7 IQGNDACARGAIKAGCRFFAGYPITPSTEIAEEMALLLPRE--GGVFVQMEDEIGALGAV 64
Query: 67 VGASAAGVRTFTATASQGLALMHEVLFIAAGMRLPIVMAIGNRALSAPINIWNDWQDTIS 126
+GA +GVR TAT+ G +LM E + AA P+V+ R + Q +
Sbjct: 65 IGAVWSGVRGMTATSGPGFSLMQEHVGYAAMTETPLVIVNVQRGSPSTGQPTMASQSDMM 124
Query: 127 QRDTGW------IQFYAENNQEALDLILLAYKVAEDERVLLPAMVGFDAFILTHTVEPVE 180
Q G I + QE D + A+ +AE+ RV P MV D I+ H E +
Sbjct: 125 QARWGSHGDYEIIALSPSSVQECFDFTVRAFNLAEEYRV--PVMVMGDE-IVGHMREKIT 181
Query: 181 IPDQEVVDEFLGEYEPKHAYLDPKRPITQGTLAFPAHYMEARYLVWEAMENARKVIDEAF 240
IPD+ + + G P +L P G PA R V + D +
Sbjct: 182 IPDRVKIRKRRGPSVPPEEFLPFSAP-EDGVPEMPAFGDGYRIPVTGLTHDEGGYPDASN 240
Query: 241 AEFEKKFGRKY-----------QKIEEYRTDDAEIIFVTMGSLAGTLKDWVDKKREEGYK 289
E + ++ ++E T+DA I ++ G+ + ++ V RE+G +
Sbjct: 241 PEGHHRLVKRLCDKILRHRDRISDVQEELTEDAYITVISYGAPSRSVATAVKMAREDGVR 300
Query: 290 VGAAKMTVYRPFPVEEIRELAKKTKVLAFIEKDISMGLY 328
G K+ PFP E+R A+++ L +E ++ Y
Sbjct: 301 AGYLKINTPWPFPETEVRAAAERSGKLLVVEMNLGQMFY 339
>gb|AAD55757.1|AF146519_1 (AF146519) putative pyruvate:ferredoxin oxidoreductase 2 [Giardia
intestinalis]
Length = 512
Score = 90.5 bits (221), Expect = 3e-17
Identities = 69/244 (28%), Positives = 118/244 (48%), Gaps = 8/244 (3%)
Query: 70 SAAGVRTFTATASQGLALMHEVLFIAAGMRLPIVMAIGNRALSA-PINIWNDWQDTISQR 128
S G+ T TASQGL LM ++ AG LP V + R ++ +++ D D ++ R
Sbjct: 15 SDTGLLASTYTASQGLLLMIPNMYKMAGEHLPAVFHVAARTIATHSLSVHGDHADIMAVR 74
Query: 129 DTGWIQFYAENNQEALDLILLAYKVAEDERVLLPAMVGFDAFILTHTVEPVEIPDQEVVD 188
TG +E+ QEA+D+ + A+ A P + FD F +HT++ VE+ D E +
Sbjct: 75 QTGCTIMVSEDIQEAMDMAIAAHLTAIYSSY--PVVHAFDGFRTSHTIKKVELIDYEHLR 132
Query: 189 EFLGEYEPKHAY----LDPKRPITQGTLAFPAHYMEARYLVWEAMENARKVIDEAFAEFE 244
+ Y+ A+ L P+ P +G+ P +M+A + ++ AF +
Sbjct: 133 PHV-PYDEIEAFRQKSLSPQHPEMRGSCQGPPIWMQAGEADNKHYAEIPGHVERAFEKVR 191
Query: 245 KKFGRKYQKIEEYRTDDAEIIFVTMGSLAGTLKDWVDKKREEGYKVGAAKMTVYRPFPVE 304
+ GR Y+ + DA + + MGS T+ + V+ E G KVG + ++RPF +
Sbjct: 192 EITGRSYKFFNYFGAPDATAVVIIMGSGYLTVHEVVEYLVERGDKVGVVCVHLFRPFCGD 251
Query: 305 EIRE 308
++ E
Sbjct: 252 KLLE 255
>pir||F75168 2-ketoglutarate ferredoxin oxidoreductase, chain alpha (kora-2)
PAB0346 - Pyrococcus abyssi (strain Orsay)
>gi|5457939|emb|CAB49429.1| (AJ248284) 2-ketoglutarate
ferredoxin oxidoreductase, subunit alpha (korA-2)
[Pyrococcus abyssi]
Length = 385
Score = 89.3 bits (218), Expect = 7e-17
Identities = 94/331 (28%), Positives = 148/331 (44%), Gaps = 32/331 (9%)
Query: 7 MKANEAAAWAAKLAKPKVIAAFPITPSTLVPEKISEFVANGELDAEFIKVESEHSAISAL 66
++ +EA A AA LA + A +PITP++ + E ++ ++ +D I++E E ++I+A+
Sbjct: 13 IQGDEAIARAAILAGCRFYAGYPITPASEIFEAMALYMPL--VDGVVIQMEDEIASIAAI 70
Query: 67 VGASAAGVRTFTATASQGLALMHEVLFIAAGMRLPIVM--------AIGNRALSAPINIW 118
+GAS AG + TAT+ G +LM E + A PIV+ + G L + +I
Sbjct: 71 IGASWAGAKAMTATSGPGFSLMQENIGYAVMTETPIVVVDVQRGGPSTGQPTLPSQGDIM 130
Query: 119 NDWQDTISQRDTGWIQFYAENNQEALDLILLAYKVAEDERVLLPAMVGFDAFILTHTVEP 178
T D I QEA D + A+ +AE R P ++ DA + H E
Sbjct: 131 QSIWGT--HGDHSLIVLSPSTVQEAFDFTIRAFNLAEKYRT--PVILLSDAEV-GHMRER 185
Query: 179 VEIPDQ---EVVDEFL--GEYEPKHAYLDPKRPITQGTLAFPAHYMEARYLVWEAMEN-- 231
V IP+ E+V+ L E E K + DP F Y Y+ +
Sbjct: 186 VYIPEPDEIEIVNRKLPQNEEEAKLPFGDPHGDFVPPMPIFGRGY--RTYVTGLTHDERG 243
Query: 232 -----ARKVIDEAFAEFEKKFGRKYQKIEEYRT---DDAEIIFVTMGSLAGTLKDWVDKK 283
R+V + +K R + I +Y DDAE+ VT G +A + + +
Sbjct: 244 RPRTVEREVHERVIRRIVEKIERNKKDIFDYEARELDDAEVAIVTTGIVARSALRAIKEL 303
Query: 284 REEGYKVGAAKMTVYRPFPVEEIRELAKKTK 314
RE G K G K+ PF E I ++A K +
Sbjct: 304 RELGIKAGLLKINTIWPFDFELIEKIAGKVE 334
>pir||F71046 probable ferredoxin oxidoreductase alpha subunit - Pyrococcus
horikoshii >gi|3258091|dbj|BAA30774.1| (AP000006) 385aa
long hypothetical ferredoxin oxidoreductase alpha
subunit [Pyrococcus horikoshii]
Length = 385
Score = 87.4 bits (213), Expect = 3e-16
Identities = 95/329 (28%), Positives = 145/329 (43%), Gaps = 28/329 (8%)
Query: 7 MKANEAAAWAAKLAKPKVIAAFPITPSTLVPEKISEFVANGELDAEFIKVESEHSAISAL 66
++ +EA A AA LA + A +PITP++ + E ++ ++ +D I++E E +I+A+
Sbjct: 13 IQGDEAIARAAILAGCRFYAGYPITPASEIFEAMALYMPL--IDGVVIQMEDEIGSIAAV 70
Query: 67 VGASAAGVRTFTATASQGLALMHEVLFIAAGMRLPIVM--------AIGNRALSAPINIW 118
+GAS AGV+ TAT+ G +LM E + A PIV+ + G L + +I
Sbjct: 71 IGASWAGVKAMTATSGPGFSLMQENIGYAVMTETPIVVVNVQRGGPSTGQPTLPSQGDIM 130
Query: 119 NDWQDTISQRDTGWIQFYAENNQEALDLILLAYKVAEDERVLLPAMVGFDAFILTHTVEP 178
T D I QEA D + A+ +AE R P ++ DA + H E
Sbjct: 131 QSIWGT--HGDHTLIVLSPSTVQEAFDFTIRAFNLAEKYRT--PVILLSDAEV-GHMRER 185
Query: 179 VEIPDQ---EVVDEFL--GEYEPKHAYLDPKRPITQGTLAFPAHYME-ARYLVWEAMENA 232
V IP+ E+V+ L E E K + DP F Y L +
Sbjct: 186 VYIPEPDEIEIVNRKLPGSEEEAKLPFGDPHGDGVPPMPIFGKGYRTYVTGLTHDEKGRP 245
Query: 233 RKVIDEAFAEFEKKFGRKYQK-------IEEYRTDDAEIIFVTMGSLAGTLKDWVDKKRE 285
R V E ++ K +K E DDAEI VT G +A + + + R
Sbjct: 246 RTVEREVHERLIRRIFEKIEKNKKDIFDYEARELDDAEIAIVTTGIVARSALRAIKELRN 305
Query: 286 EGYKVGAAKMTVYRPFPVEEIRELAKKTK 314
G K G K+ PF E I ++A+K +
Sbjct: 306 LGIKAGLLKINTIWPFDFELIEKVAEKVE 334
>sp|Q57724|KORA_METJA 2-OXOGLUTARATE SYNTHASE SUBUNIT KORA (2-KETOGLUTARATE
OXIDOREDUCTASE ALPHA CHAIN) (KOR)
(2-OXOGLUTARATE-FERREDOXIN OXIDOREDUCTASE ALPHA SUBUNIT)
>gi|2127893|pir||E64334 2-oxoacid--ferredoxin
oxidoreductase (EC 1.2.7.-) alpha chain - Methanococcus
jannaschii >gi|1592279|gb|AAB98264.1| (U67483)
2-ketoglutarate ferredoxin oxidoreductase, subunit alpha
(korA) [Methanococcus jannaschii]
Length = 366
Score = 85.0 bits (207), Expect = 1e-15
Identities = 95/366 (25%), Positives = 168/366 (44%), Gaps = 37/366 (10%)
Query: 7 MKANEAAAWAAKLAKPKVIAAFPITPSTLVPEKISEFVANGELDAEFIKVESEHSAISAL 66
M+ N+A A A A + A +PITPST + E ++ + ++ +I++E E +I+A+
Sbjct: 6 MQGNQACAKGAIKAGCRFFAGYPITPSTEIAEAMARELP--KVGGYYIQMEDEIGSIAAV 63
Query: 67 VGASAAGVRTFTATASQGLALMHEVLFIAAGMRLPIVM--------AIGNRALSAPINIW 118
+GAS G++ TAT+ G +LM E + A P V+ + G +++ ++
Sbjct: 64 IGASWGGLKAMTATSGPGFSLMQENIGFAYMTETPCVVVDIQRGGPSTGQPTMASQGDMM 123
Query: 119 N-DWQDTISQRDTGWIQFYAENNQEALDLILLAYKVAEDERVLLPAMVGFDAFILTHTVE 177
W S D I + QE D ++A+ AE R+ P V D I+ H E
Sbjct: 124 QCRWG---SHGDYEVIALAPSSVQEMYDFTIMAFNYAEKYRI--PVFVMADE-IVGHMRE 177
Query: 178 PVEIPDQ-EVVDEFLGEYEP-KHAY----LDPKRPITQGTLAFPAHYMEARYLVWEAMEN 231
V + D E+++ E +P K Y L P+ P+ + H + +
Sbjct: 178 KVILHDNIEIINRKKPEEKPCKKPYPFDKLIPEMPVFGE--GYNVHITGLTHDERGYPDV 235
Query: 232 ARKVIDEAFAEFEKKFGRKYQKIEEYRTD--DAEIIFVTMGSLAGTLKDWVDKKREEGYK 289
+ + D+ K + +I ++ + DAEI+FV GS + T+K V RE+G
Sbjct: 236 SPETHDKLVRRIVNKIRKNKDEIIKWEGENLDAEIVFVCYGSPSRTVKHAVRNLREKGLD 295
Query: 290 VGAAKMTVYRPFPVEEIRELAKKTKVLAFIEKDISMG-LYGAVFTDASAALINESEKPLM 348
VG ++ PFP +L KK K + ++++G +Y V + ++E+ ++
Sbjct: 296 VGYIRLITVYPFP----DDLLKKLKAKKVVVPEMNLGQIYYEV-----ERVCKKAEEVIL 346
Query: 349 LDFIAG 354
+D I G
Sbjct: 347 VDKIGG 352
>emb|CAA34396.1| (X16345) nifJ [Klebsiella pneumoniae]
Length = 167
Score = 80.4 bits (195), Expect = 3e-14
Identities = 56/150 (37%), Positives = 81/150 (53%), Gaps = 8/150 (5%)
Query: 7 MKANEAAAWAAKLAKPKVIAAFPITPSTLVPEKISEFVANGELD-----AEFIKVESEHS 61
M N AAAW + A +V A +PITPST + E + E+ A G+ + ++++SE
Sbjct: 8 MDGNAAAAWIS-YAFTEVAAIYPITPSTPMAENVDEWAAQGKKNLFGQPVRLMEMQSEAG 66
Query: 62 AISALVGASAAGVRTFTATASQGLALMHEVLFIAAGMRLPIVMAIGNRALSA-PINIWND 120
A A+ GA AG T T TASQGL LM ++ AG LP V + RAL+ +NI+ D
Sbjct: 67 AAGAVHGALQAGALTTTYTASQGLLLMIPNMYKIAGELLPGVFHVSARALATNSLNIFGD 126
Query: 121 WQDTISQRDTGWIQFYAENNQEALDLILLA 150
D ++ R +G N Q+ +DL +A
Sbjct: 127 -HDVMAVRQSGCAMLAENNVQQVMDLSTIA 155
>pir||E64593 2-oxoacid--ferredoxin oxidoreductase (EC 1.2.7.-) alpha chain -
Helicobacter pylori (strain 26695)
>gi|2313707|gb|AAD07654.1| (AE000572) ferredoxin
oxidoreductase, alpha subunit [Helicobacter pylori
26695]
Length = 375
Score = 72.2 bits (174), Expect = 1e-11
Identities = 85/341 (24%), Positives = 146/341 (41%), Gaps = 37/341 (10%)
Query: 6 VMKANEAAAWAAKLAKPKVIAAFPITPSTLVPEKISEFVANGELDAEFIKVESEHSAISA 65
+ NE A AA + +PITPS+ + +S VA + FI++E E S IS
Sbjct: 5 ISDGNELVAKAAIEVGCRFFGGYPITPSSDIMHAMS--VALPKCGGHFIQMEDEISGISV 62
Query: 66 LVGASAAGVRTFTATASQGLALMHEVLFIAAGMRLPIVMAIGNRALSAPINIWNDWQDTI 125
+GAS +G ++ TA++ G++L E + + +P+V+A R S P +
Sbjct: 63 SLGASMSGTKSMTASSGPGISLKVEQIGYSFMAEIPLVIADVMR--SGPS---TGMPTRV 117
Query: 126 SQRDTGWIQ-----------FYAENNQEALDLILLAYKVAEDERVLLPAMVGFDAFILTH 174
+Q D +++ N +EA + A+ +A E ++ P + D + H
Sbjct: 118 AQGDVNFLRHPIHGDFKAVALAPANLEEAYTETVRAFNLA--EMLMTPVFLLMDETV-GH 174
Query: 175 TVEPVEIPDQEVVD-------EFLG---EYEPKHAYLDPKRPITQGTLAFPAHYMEARY- 223
V+IPD E V EFLG +Y+P D + + H +
Sbjct: 175 MYGKVQIPDLEEVQKMTINRKEFLGDKKDYKPYGVAQDEPAVLNPFFKGYRYHVSGLHHG 234
Query: 224 ---LVWEAMENARKVIDEAFAEFEKKFGRKYQKIEEYRTDDAEIIFVTMGSLAGTLKDWV 280
E + +ID F + E K + EE + AEI+ + GS++ +K+ +
Sbjct: 235 PIGFPTEDAKIGGDLIDRLFNKIESK-QDIINENEEMDLEGAEIVVIAYGSVSLAVKEAL 293
Query: 281 -DKKREEGYKVGAAKMTVYRPFPVEEIRELAKKTKVLAFIE 320
D +E KVG + P P + ++E+ K + + IE
Sbjct: 294 KDYHKESKQKVGFFRPKTLWPSPAKRLKEIGDKYEKILVIE 334
>gb|AAC38211.1| (AF021094) OorA subunit of 2-oxoglutarate:acceptor oxidoreductase
[Helicobacter pylori]
Length = 371
Score = 71.0 bits (171), Expect = 2e-11
Identities = 84/338 (24%), Positives = 143/338 (41%), Gaps = 31/338 (9%)
Query: 6 VMKANEAAAWAAKLAKPKVIAAFPITPSTLVPEKISEFVANGELDAEFIKVESEHSAISA 65
+ NE A AA + +PITPS+ + +S VA FI++E E S IS
Sbjct: 5 ISDGNELVAKAAIEVGCRFFGGYPITPSSDIMHAMS--VALPNCGGHFIQMEDEISGISV 62
Query: 66 LVGASAAGVRTFTATASQGLALMHEVLFIAAGMRLPIVMAIGNRALSAPINIWNDWQDTI 125
+GAS +G ++ TA++ G++L E + + +P+V+A R S P +
Sbjct: 63 SLGASMSGTKSMTASSGPGISLKVEQIGYSFMAEIPLVIADVMR--SGPS---TGMPTRV 117
Query: 126 SQRDTGWIQFYAENNQEALDLILLAYKVAEDERVL---LPAMVGFDAFILT-----HTVE 177
Q D +++ + +A+ L + + A E L M+ F+L H
Sbjct: 118 DQGDVNFLRHPIHGDFKAVALAPASLEEAYTETARAFNLAEMLMTPVFLLMDETVGHMYG 177
Query: 178 PVEIPDQEVVD-------EFLG---EYEPKHAYLDPKRPITQGTLAFPAHYMEARY---- 223
V+IPD E V EF+G +Y+P D + + H +
Sbjct: 178 KVQIPDLEEVQKTTINRKEFVGDKKDYKPYGVAQDEPAVLNPFFKGYRYHVSGLHHGPIG 237
Query: 224 LVWEAMENARKVIDEAFAEFEKKFGRKYQKIEEYRTDDAEIIFVTMGSLAGTLKDWV-DK 282
E + +ID F + E K + EE + AEI+ + GS++ +K+ + D
Sbjct: 238 FPTEDAKIGGDLIDRLFNKIESK-QDIINENEEMDLEGAEIVIIAYGSVSLAVKEALKDY 296
Query: 283 KREEGYKVGAAKMTVYRPFPVEEIRELAKKTKVLAFIE 320
+E KVG + P P + ++E+ K + + IE
Sbjct: 297 HKESNQKVGFFRPKTLWPSPAKRLKEIGDKYEKILVIE 334
>emb|CAA25502.1| (X01007) URF [Klebsiella pneumoniae]
Length = 127
Score = 70.6 bits (170), Expect = 3e-11
Identities = 48/120 (40%), Positives = 67/120 (55%), Gaps = 7/120 (5%)
Query: 7 MKANEAAAWAAKLAKPKVIAAFPITPSTLVPEKISEFVANGELD-----AEFIKVESEHS 61
M N AAAW + A +V A +PITPST + E + E+ A G+ + ++++SE
Sbjct: 8 MDGNAAAAWIS-YAFTEVAAIYPITPSTPMAENVDEWAAQGKKNLFGQPVRLMEMQSEAG 66
Query: 62 AISALVGASAAGVRTFTATASQGLALMHEVLFIAAGMRLPIVMAIGNRALSA-PINIWND 120
A A+ GA AG T T TASQGL LM ++ AG LP V + RAL+ +NI+ D
Sbjct: 67 AAGAVHGALQAGALTTTYTASQGLLLMIPNMYKIAGELLPGVFHVSARALATNSLNIFGD 126
>pir||G71919 chain of 2-oxoglutarate oxidoreductase - Helicobacter pylori
(strain J99) >gi|4155084|gb|AAD06119.1| (AE001486)
SUBUNIT OF 2-OXOGLUTARATE OXIDOREDUCTASE [Helicobacter
pylori J99]
Length = 375
Score = 69.5 bits (167), Expect = 6e-11
Identities = 83/341 (24%), Positives = 144/341 (41%), Gaps = 37/341 (10%)
Query: 6 VMKANEAAAWAAKLAKPKVIAAFPITPSTLVPEKISEFVANGELDAEFIKVESEHSAISA 65
+ NE A AA + +PITPS+ + +S VA + FI++E E S IS
Sbjct: 5 ISDGNELVAKAAIEVGCRFFGGYPITPSSDIMHAMS--VALPKCGGHFIQMEDEISGISV 62
Query: 66 LVGASAAGVRTFTATASQGLALMHEVLFIAAGMRLPIVMAIGNRALSAPINIWNDWQDTI 125
+GAS +G ++ TA++ G++L E + + +P+V+A R S P +
Sbjct: 63 SLGASMSGTKSMTASSGPGISLKVEQIGYSFMAEIPLVIADVMR--SGPS---TGMPTRV 117
Query: 126 SQRDTGWIQ-----------FYAENNQEALDLILLAYKVAEDERVLLPAMVGFDAFILTH 174
+Q D +++ N +EA + A+ +A E ++ P + D + H
Sbjct: 118 AQGDVNFLRHPIHGDFKAVALAPANLEEAYTETVRAFNLA--EMLMTPVFLLMDETV-GH 174
Query: 175 TVEPVEIPDQEVVD-------EFLG---EYEPKHAYLDPKRPITQGTLAFPAHYMEARY- 223
V+IPD E V EF G +Y+P D + + H +
Sbjct: 175 MYGKVQIPDLEEVQKMTINRKEFAGDKKDYKPYGVAQDEPAVLNPFFKGYRYHVSGLHHG 234
Query: 224 ---LVWEAMENARKVIDEAFAEFEKKFGRKYQKIEEYRTDDAEIIFVTMGSLAGTLKDWV 280
E + +ID F + E K + EE + EI+ + GS++ +K+ +
Sbjct: 235 PIGFPTEDAKIGGDLIDRLFHKIESK-QDIINENEEMDLEGTEIVIIAYGSVSLAVKEAL 293
Query: 281 -DKKREEGYKVGAAKMTVYRPFPVEEIRELAKKTKVLAFIE 320
D +E KVG + P P + ++E+ K + + IE
Sbjct: 294 KDYNKESKQKVGFFRPKTLWPSPAKRLKEIGDKYEKILVIE 334
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.319 0.135 0.387
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 138190127
Number of Sequences: 2977
Number of extensions: 5664194
Number of successful extensions: 16900
Number of sequences better than 1.0e-10: 69
Number of HSP's better than 0.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 41
Number of HSP's that attempted gapping in prelim test: 16697
Number of HSP's gapped (non-prelim): 75
length of query: 395
length of database: 189,106,746
effective HSP length: 58
effective length of query: 337
effective length of database: 154,394,500
effective search space: 52030946500
effective search space used: 52030946500
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 166 (69.1 bits)