BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB1507 (taqD) DE:glycerol-3-phosphate cytidyltransferase,
putative
(148 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||A75041 probable glycerol-3-phosphate cytidyltransferase PAB... 296 6e-80
pir||H71120 hypothetical protein PH0735 - Pyrococcus horikoshii ... 269 1e-71
pir||B64447 hypothetical protein MJ1179 - Methanococcus jannasch... 125 3e-28
gi|11499013 glycerol-3-phosphate cytidyltransferase (taqD) [Arch... 109 2e-23
gb|AAK41228.1| Conserved hypothetical protein [Sulfolobus solfat... 106 1e-22
pir||F69212 autotrophic growth protein - Methanobacterium thermo... 104 4e-22
emb|CAC12265.1| (AL445066) Aut related protein [Thermoplasma aci... 103 9e-22
pir||E72454 hypothetical protein APE2281 - Aeropyrum pernix (str... 99 2e-20
pir||H70317 glycerol-3-phosphate cytidyltransferase - Aquifex ae... 94 6e-19
gb|AAG19246.1| (AE005020) glycerol-3-phosphate cytidyltransferas... 84 9e-16
pir||A70419 glycerol-3-phosphate cytidyltransferase - Aquifex ae... 80 1e-14
pir||H81319 probable ADP-heptose synthase Cj1150c [imported] - C... 80 1e-14
gb|AAD49846.1|AF163661_1 (AF163661) RfaE [Salmonella enterica] 78 5e-14
gb|AAD49847.1|AF163662_1 (AF163662) RfaE mutant [Salmonella ente... 78 5e-14
sp|P76658|RFAE_ECOLI ADP-HEPTOSE SYNTHASE >gi|7429268|pir||B6509... 76 3e-13
gb|AAC67351.1| (AC005499) putative phospholipid cytidylyltransfe... 73 1e-12
gi|4505651 phosphate cytidylyltransferase 2, ethanolamine [Homo ... 73 2e-12
pir||T34841 probable bifunctional synthase /transferase - Strept... 73 2e-12
gi|11427388 phosphate cytidylyltransferase 2, ethanolamine [Homo... 73 2e-12
gb|AAC28864.1| (AF080568) CTP:phosphoethanolamine cytidylyltrans... 72 4e-12
pir||C71887 probable adp-d-glycero-d-mannoheptose synthase - Hel... 70 1e-11
pir||C81009 aut protein NMB2076 [imported] - Neisseria meningiti... 70 1e-11
sp|O25529|RFAE_HELPY ADP-HEPTOSE SYNTHASE >gi|7429269|pir||B6462... 69 2e-11
gb|AAF53257.1| (AE003639) CG5547 gene product [alt 2] [Drosophil... 69 3e-11
gb|AAF53258.1| (AE003639) CG5547 gene product [alt 1] [Drosophil... 69 3e-11
gb|AAG02371.1|AF210249_31 (AF210249) sugar synthase BlmC [Strept... 68 6e-11
pir||I39548 aut protein - Alcaligenes eutrophus >gi|555666|gb|AA... 68 7e-11
sp|O05074|RFAE_HAEIN ADP-HEPTOSE SYNTHASE >gi|1073895|pir||C6412... 68 7e-11
pir||G82031 probable transferase NMA0356 [imported] - Neisseria ... 68 7e-11
>pir||A75041 probable glycerol-3-phosphate cytidyltransferase PAB1507 -
Pyrococcus abyssi (strain Orsay)
>gi|5458735|emb|CAB50222.1| (AJ248287)
glycerol-3-phosphate cytidyltransferase, putative
[Pyrococcus abyssi]
Length = 148
Score = 296 bits (751), Expect = 6e-80
Identities = 148/148 (100%), Positives = 148/148 (100%)
Query: 1 MAGNRRIRVVVGGVFDILHVGHIHFLKMAKELGDELIVIVAHDETVKKRKGRPPINPAED 60
MAGNRRIRVVVGGVFDILHVGHIHFLKMAKELGDELIVIVAHDETVKKRKGRPPINPAED
Sbjct: 1 MAGNRRIRVVVGGVFDILHVGHIHFLKMAKELGDELIVIVAHDETVKKRKGRPPINPAED 60
Query: 61 RAEVLRAIRYVDDVVIGEPGEISLELIKKLKPDVIALGPDQDFDCRTLKEKLRSIGLKVE 120
RAEVLRAIRYVDDVVIGEPGEISLELIKKLKPDVIALGPDQDFDCRTLKEKLRSIGLKVE
Sbjct: 61 RAEVLRAIRYVDDVVIGEPGEISLELIKKLKPDVIALGPDQDFDCRTLKEKLRSIGLKVE 120
Query: 121 VIRLPYLYKEDRAKTSKIIKRITEIFCD 148
VIRLPYLYKEDRAKTSKIIKRITEIFCD
Sbjct: 121 VIRLPYLYKEDRAKTSKIIKRITEIFCD 148
>pir||H71120 hypothetical protein PH0735 - Pyrococcus horikoshii
>gi|3257143|dbj|BAA29826.1| (AP000003) 148aa long
hypothetical protein [Pyrococcus horikoshii]
Length = 148
Score = 269 bits (681), Expect = 1e-71
Identities = 130/148 (87%), Positives = 141/148 (94%)
Query: 1 MAGNRRIRVVVGGVFDILHVGHIHFLKMAKELGDELIVIVAHDETVKKRKGRPPINPAED 60
M +R+IRVVVGGVFDI+H GH+HFLKMAKELGDELIVIVAHDETVKKRKGRPPINPAED
Sbjct: 1 MGSDRKIRVVVGGVFDIIHAGHVHFLKMAKELGDELIVIVAHDETVKKRKGRPPINPAED 60
Query: 61 RAEVLRAIRYVDDVVIGEPGEISLELIKKLKPDVIALGPDQDFDCRTLKEKLRSIGLKVE 120
RAEVL+AIRYVDDVVIG+PGEISL+LIK+LKPDVIALGPDQDFDC LK KL+SIGL VE
Sbjct: 61 RAEVLKAIRYVDDVVIGKPGEISLDLIKRLKPDVIALGPDQDFDCEDLKRKLKSIGLNVE 120
Query: 121 VIRLPYLYKEDRAKTSKIIKRITEIFCD 148
VIRLPYLYK+DRAKTSKII+RITEIFCD
Sbjct: 121 VIRLPYLYKKDRAKTSKIIERITEIFCD 148
>pir||B64447 hypothetical protein MJ1179 - Methanococcus jannaschii
>gi|1591806|gb|AAB99182.1| (U67559) glycerol-3-phosphate
cytidyltransferase (taqD) [Methanococcus jannaschii]
Length = 149
Score = 125 bits (310), Expect = 3e-28
Identities = 72/142 (50%), Positives = 88/142 (61%), Gaps = 2/142 (1%)
Query: 8 RVVVGGVFDILHVGHIHFLKMAKELGDELIVIVAHDETVKKRKGRPPINPAEDRAEVLRA 67
RVV G FDILH GH LK AK LGDELIVIVA DETVKK KGR PI P E R E++ A
Sbjct: 4 RVVTAGTFDILHPGHYEILKFAKSLGDELIVIVARDETVKKLKGRKPIIPEEQRREMVEA 63
Query: 68 IRYVDDVVIGEPGEISLELIKKLKPDVIALGPDQ-DFDCRTLKEKLRSIGLKVEVIRLPY 126
++ VD ++G + LE I +LKPD+I LGPDQ FD TLK++L L E++R
Sbjct: 64 LKPVDKAILGSL-KNKLEPILELKPDIIVLGPDQTTFDEETLKKELAKYNLYPEIVRFRG 122
Query: 127 LYKEDRAKTSKIIKRITEIFCD 148
K + I+K I FC+
Sbjct: 123 YKKCPFHSSFDIVKEIIRRFCN 144
>gi|11499013 glycerol-3-phosphate cytidyltransferase (taqD) [Archaeoglobus
fulgidus] >gi|7451667|pir||A69427 glycerol-3-phosphate
cytidyltransferase (taqD) homolog - Archaeoglobus
fulgidus >gi|2649161|gb|AAB89835.1| (AE001006)
glycerol-3-phosphate cytidyltransferase (taqD)
[Archaeoglobus fulgidus]
Length = 137
Score = 109 bits (269), Expect = 2e-23
Identities = 62/132 (46%), Positives = 83/132 (61%), Gaps = 3/132 (2%)
Query: 13 GVFDILHVGHIHFLKMAKELGDELIVIVAHDETVKKRKGRPPINPAEDRAEVLRAIRYVD 72
G FDI+H GHI FL+ AK+LGDELIVIVA ++ V+ + P+ P E R V+ AI+YVD
Sbjct: 4 GTFDIIHPGHITFLREAKKLGDELIVIVAREKNVRHKP--KPVVPEEQRRRVVEAIKYVD 61
Query: 73 DVVIGEPGEISLELIKKLKPDVIALGPDQDFDCRTLKEKLRSIGLKVEVIRLPYLYKEDR 132
++G+ ++ I +LKPDVI LG DQ FD LKE+LR L EV+R+
Sbjct: 62 KAILGDEDDM-FRPIMELKPDVIVLGHDQHFDEDWLKEELRKRNLNCEVVRIRVKEDCPL 120
Query: 133 AKTSKIIKRITE 144
+ KII+RI E
Sbjct: 121 CSSHKIIERILE 132
>gb|AAK41228.1| Conserved hypothetical protein [Sulfolobus solfataricus]
Length = 226
Score = 106 bits (263), Expect = 1e-22
Identities = 59/142 (41%), Positives = 88/142 (61%), Gaps = 3/142 (2%)
Query: 8 RVVVGGVFDILHVGHIHFLKMAKELGDELIVIVAHDETVKKRKGRPPINPAEDRAEVLRA 67
+V V G FDILH GHI FLK A + G + V VA D ++ KGR PIN + R E++++
Sbjct: 83 KVFVAGTFDILHPGHIEFLKEASKYG-RVYVTVARDSNSERIKGRKPINDEQTRLEIIKS 141
Query: 68 IRYVDDVVIGEPGEISLELIKKLKPDVIALGPDQDFDCRTLKEKLRSIGLKVEVIRL-PY 126
IRYV D ++G+ E L+ ++++ PD+I LGPDQ D L E+L+ GL ++IRL
Sbjct: 142 IRYVFDAILGDQ-EDFLKSVERINPDIIFLGPDQKVDEAKLLEELKKRGLSPQIIRLNER 200
Query: 127 LYKEDRAKTSKIIKRITEIFCD 148
+ K + T+ II I + +C+
Sbjct: 201 IRKWSHSSTTDIINEIKKRYCN 222
>pir||F69212 autotrophic growth protein - Methanobacterium thermoautotrophicum
(strain Delta H) >gi|2621935|gb|AAB85342.1| (AE000861)
autotrophic growth protein [Methanobacterium
thermoautotrophicum]
Length = 151
Score = 104 bits (258), Expect = 4e-22
Identities = 60/143 (41%), Positives = 89/143 (61%), Gaps = 5/143 (3%)
Query: 9 VVVGGVFDILHVGHIHFLKMAKELGDE---LIVIVAHDETVKKRKGRPPINPAEDRAEVL 65
V+ G FDI+H GH FL+ A++LG E L+V++A D TV+ RK R PI + R EV+
Sbjct: 4 VMATGTFDIIHPGHGFFLEEARKLGGEDARLVVVLARDSTVRARK-RTPIVGEKQRLEVV 62
Query: 66 RAIRYVDDVVIGEPGEISLELIKKLKPDVIALGPDQDFDCRTLKEKLRSIGLKVEVIRLP 125
R ++ VD+ +G ++ E++ ++KPD+IA+GPDQ FD L+++LR GL EV R+
Sbjct: 63 RMLKPVDEAYLGSETDM-FEIVHRIKPDIIAIGPDQKFDVDELRDELRRRGLGCEVRRIE 121
Query: 126 YLYKEDRAKTSKIIKRITEIFCD 148
+ T KIIKRI + D
Sbjct: 122 KYRDAELDSTCKIIKRIRSMEFD 144
>emb|CAC12265.1| (AL445066) Aut related protein [Thermoplasma acidophilum]
Length = 142
Score = 103 bits (255), Expect = 9e-22
Identities = 53/139 (38%), Positives = 89/139 (63%), Gaps = 3/139 (2%)
Query: 7 IRVVVGGVFDILHVGHIHFLKMAKELGDELIVIVAHDETVKKRKGRPPINPAEDRAEVLR 66
+RV+ GVFDI+H+GHIH+L+ +K+LGDEL+V+VA D T +K G+ PI R +++
Sbjct: 2 VRVMATGVFDIIHLGHIHYLRESKKLGDELVVVVARDSTARK-NGKVPIFDENSRLKLVS 60
Query: 67 AIRYVDDVVIGEPGEISLELIKKLKPDVIALGPDQDFDCRTLKEKLRSIGLKVEVIRLPY 126
++ VD ++G ++ ++ + ++ PD+I LG DQ FD LK KL IG+ ++R+
Sbjct: 61 ELKPVDRAILGHEDDM-MKTVVEVMPDIITLGYDQKFDEADLKRKLDQIGVNSRIVRIS- 118
Query: 127 LYKEDRAKTSKIIKRITEI 145
Y + +S + K+I E+
Sbjct: 119 KYDGNLNSSSMVRKKIMEL 137
>pir||E72454 hypothetical protein APE2281 - Aeropyrum pernix (strain K1)
>gi|5105982|dbj|BAA81293.1| (AP000064) 256aa long
hypothetical protein [Aeropyrum pernix]
Length = 256
Score = 99.5 bits (244), Expect = 2e-20
Identities = 53/120 (44%), Positives = 77/120 (64%), Gaps = 3/120 (2%)
Query: 8 RVVVGGVFDILHVGHIHFLKMAKELGDELIVIVAHDETVKKRKGRPPINPAEDRAEVLRA 67
RV VGG F+ILH GH+ L+ A LG +L V++A D TV+K KGR PI + R +V+ A
Sbjct: 112 RVFVGGTFEILHPGHVELLRYASSLG-KLYVVIARDSTVEKIKGRKPILGEKSRLKVVSA 170
Query: 68 IRYVDDVVIGEPGEISLELIKKLKPDVIALGPDQDFDCRTLKEKLRS-IGLKVEVIRLPY 126
+RYV + +G + L+ ++K+KPD+I LGPDQ FD L + + +G + EV+R Y
Sbjct: 171 VRYVYNAFLGSEKDF-LDSVEKVKPDIIVLGPDQGFDEEQLAAMVEARLGYRPEVVRFGY 229
>pir||H70317 glycerol-3-phosphate cytidyltransferase - Aquifex aeolicus
>gi|2982903|gb|AAC06521.1| (AE000677)
glycerol-3-phosphate cytidyltransferase [Aquifex
aeolicus]
Length = 157
Score = 94.4 bits (231), Expect = 6e-19
Identities = 58/140 (41%), Positives = 87/140 (61%), Gaps = 7/140 (5%)
Query: 9 VVVGGVFDILHVGHIHFLKMAKELGDELIVIVAHDETVKKRKG-RPPINPAEDRAEVLRA 67
V G FDI+H GH+ +L+ AK+LGD L+V + D +V++ KG R PI P E RA+VL +
Sbjct: 22 VFTNGCFDIIHAGHVDYLEKAKKLGDILVVGMNSDSSVRRIKGERRPIIPQEMRAKVLSS 81
Query: 68 IRYVDDVVIGEPGEISLELIKKLKPDVIALGPDQDFDCRTLKEKLRSIGLKVEVIRLPYL 127
++ VD VVI E + +LIK +KPDV+ G D D +E + S G K V+ +P+
Sbjct: 82 LKPVDYVVIFEE-DTPEKLIKAIKPDVLVKGGDWPLDKIVGREFVESYGGK--VLTIPFE 138
Query: 128 YKEDRAKTSKIIKRITEIFC 147
Y TSKI++++ E++C
Sbjct: 139 YD---ISTSKIVQKVLELYC 155
>gb|AAG19246.1| (AE005020) glycerol-3-phosphate cytidyltransferase; TaqD
[Halobacterium sp. NRC-1]
Length = 146
Score = 83.9 bits (204), Expect = 9e-16
Identities = 49/116 (42%), Positives = 67/116 (57%), Gaps = 3/116 (2%)
Query: 8 RVVVGGVFDILHVGHIHFLKMAKELGDELIVIVAHDETVKKRKGRPPINPAEDRAEVLRA 67
RVV G FD++H GH+H+L+ A +GDEL VI+A E V + PP+ P R +V+ A
Sbjct: 3 RVVAQGTFDLIHPGHVHYLEDAAAMGDELHVILARRENVTHKD--PPVLPNRQRRDVVAA 60
Query: 68 IRYVDDVVIGEPGEISLELIKKLKPDVIALGPDQDFDCRTLKEKLRSIGLKVEVIR 123
+ VD IG P +I I+ + PDVIALG DQ D ++ +L GL V R
Sbjct: 61 LDPVDHARIGHPEDI-FAPIEAIDPDVIALGFDQHHDAAAIEAELADRGLDCAVER 115
>pir||A70419 glycerol-3-phosphate cytidyltransferase - Aquifex aeolicus
>gi|2983785|gb|AAC07343.1| (AE000737)
glycerol-3-phosphate cytidyltransferase [Aquifex
aeolicus]
Length = 168
Score = 80.4 bits (195), Expect = 1e-14
Identities = 55/150 (36%), Positives = 83/150 (54%), Gaps = 13/150 (8%)
Query: 4 NRRIRVVVG-GVFDILHVGHIHFLKMAKELGDELIVIVAHDETVKKRKGRPPINPAEDRA 62
N++ +VV+ G FD+ H+GH++ LK AK LGD LIV V+ DE KG+ + P E RA
Sbjct: 2 NKKGKVVITYGTFDLFHIGHLNLLKRAKALGDFLIVGVSTDE-FNAIKGKKSVYPYEHRA 60
Query: 63 EVLRAIRYVDDVVIGEPGEISLELIKKLKPDVIALGPD--QDFD-----CRTL----KEK 111
E++R+I+YVD V+ E +E IKK DV +G D FD C + E
Sbjct: 61 EIVRSIKYVDLVIPERNWEQKIEDIKKYNVDVFVMGDDWKGKFDYLKEYCEVVYLPRTEG 120
Query: 112 LRSIGLKVEVIRLPYLYKEDRAKTSKIIKR 141
+ + LK +++L + +ED + I+ R
Sbjct: 121 ISTTELKEALVKLSNILEEDILRVLDIVVR 150
>pir||H81319 probable ADP-heptose synthase Cj1150c [imported] - Campylobacter
jejuni (strain NCTC 11168) >gi|6968583|emb|CAB73404.1|
(AL139077) putative ADP-heptose synthase [Campylobacter
jejuni]
Length = 461
Score = 80.0 bits (194), Expect = 1e-14
Identities = 59/142 (41%), Positives = 82/142 (57%), Gaps = 12/142 (8%)
Query: 4 NRRIRVVVGGVFDILHVGHIHFLKMAKELGDELIVIVAHDETVKKRKGRP-PINPAEDRA 62
N++I V G FDI+H GHI +L AK LGD LIV + D +VK+ KG P+N RA
Sbjct: 329 NKKI-VFTNGCFDIVHFGHIKYLDKAKRLGDVLIVGLNSDASVKRLKGESRPVNSEFQRA 387
Query: 63 EVLRAIRYVDDVVIGEPGEISLELIKKLKPDVIALGPDQDFDCRTLKEKLRSIGLKVEVI 122
+L A +VD VVI + + LELI LKPD++ G D K+KL +G + V
Sbjct: 388 CMLAAFYFVDFVVIFDE-DTPLELISFLKPDILVKGAD-------YKDKL-VVGADI-VS 437
Query: 123 RLPYLYKEDRAKTSKIIKRITE 144
R+ + E+ TSKII++I +
Sbjct: 438 RVELIDFEEGFSTSKIIEKIKD 459
>gb|AAD49846.1|AF163661_1 (AF163661) RfaE [Salmonella enterica]
Length = 477
Score = 78.0 bits (189), Expect = 5e-14
Identities = 53/135 (39%), Positives = 74/135 (54%), Gaps = 7/135 (5%)
Query: 9 VVVGGVFDILHVGHIHFLKMAKELGDELIVIVAHDETVKKRKGRP-PINPAEDRAEVLRA 67
V+ GVFDILH GH+ +L A++LGD LIV V D + K+ KG P+NP E R VL A
Sbjct: 343 VMTNGVFDILHAGHVSYLANARKLGDRLIVAVNSDASTKRLKGESRPVNPLEQRMIVLGA 402
Query: 68 IRYVDDVVIGEPGEISLELIKKLKPDVIALGPDQDFDCRTLKEKLRSIGLKVEVIRLPYL 127
+ VD VV E + LI + PD++ G D + E++ + G +V V+
Sbjct: 403 LESVDWVVSFEE-DTPQRLIAGILPDLLVKGGDYKPEEIAGSEEVWANGGEVMVLNF--- 458
Query: 128 YKEDRAKTSKIIKRI 142
ED T+ IIK+I
Sbjct: 459 --EDGCSTTNIIKKI 471
>gb|AAD49847.1|AF163662_1 (AF163662) RfaE mutant [Salmonella enterica]
Length = 473
Score = 78.0 bits (189), Expect = 5e-14
Identities = 53/135 (39%), Positives = 74/135 (54%), Gaps = 7/135 (5%)
Query: 9 VVVGGVFDILHVGHIHFLKMAKELGDELIVIVAHDETVKKRKGRP-PINPAEDRAEVLRA 67
V+ GVFDILH GH+ +L A++LGD LIV V D + K+ KG P+NP E R VL A
Sbjct: 339 VMTNGVFDILHAGHVSYLANARKLGDRLIVAVNSDASTKRLKGESRPVNPLEQRMIVLGA 398
Query: 68 IRYVDDVVIGEPGEISLELIKKLKPDVIALGPDQDFDCRTLKEKLRSIGLKVEVIRLPYL 127
+ VD VV E + LI + PD++ G D + E++ + G +V V+
Sbjct: 399 LESVDWVVSFEE-DTPQRLIAGILPDLLVKGGDYKPEEIAGSEEVWANGGEVMVLNF--- 454
Query: 128 YKEDRAKTSKIIKRI 142
ED T+ IIK+I
Sbjct: 455 --EDGCSTTNIIKKI 467
>sp|P76658|RFAE_ECOLI ADP-HEPTOSE SYNTHASE >gi|7429268|pir||B65093 ADP-heptose synthase
homolog - Escherichia coli (strain K-12)
>gi|1789432|gb|AAC76088.1| (AE000387) putative kinase
[Escherichia coli K12]
Length = 477
Score = 75.7 bits (183), Expect = 3e-13
Identities = 52/137 (37%), Positives = 75/137 (53%), Gaps = 7/137 (5%)
Query: 9 VVVGGVFDILHVGHIHFLKMAKELGDELIVIVAHDETVKKRKG-RPPINPAEDRAEVLRA 67
V+ GVFDILH GH+ +L A++LGD LIV V D + K+ KG P+NP E R VL A
Sbjct: 343 VMTNGVFDILHAGHVSYLANARKLGDRLIVAVNSDASTKRLKGDSRPVNPLEQRMIVLGA 402
Query: 68 IRYVDDVVIGEPGEISLELIKKLKPDVIALGPDQDFDCRTLKEKLRSIGLKVEVIRLPYL 127
+ VD VV E + LI + PD++ G D + +++ + G +V V+
Sbjct: 403 LEAVDWVVSFEE-DTPQRLIAGILPDLLVKGGDYKPEEIAGSKEVWANGGEVLVLNF--- 458
Query: 128 YKEDRAKTSKIIKRITE 144
ED T+ IIK+I +
Sbjct: 459 --EDGCSTTNIIKKIQQ 473
>gb|AAC67351.1| (AC005499) putative phospholipid cytidylyltransferase [Arabidopsis
thaliana]
Length = 421
Score = 73.4 bits (177), Expect = 1e-12
Identities = 33/84 (39%), Positives = 56/84 (66%), Gaps = 1/84 (1%)
Query: 7 IRVVVGGVFDILHVGHIHFLKMAKELGDELIVIVAHDETVKKRKGRPPINPAEDRAEVLR 66
+RV + G FD++H GH + L+ A+ LGD+L+V V DE + KG PP+ P +R +++
Sbjct: 55 VRVYMDGCFDMMHYGHCNALRQARALGDQLVVGVVSDEEIIANKG-PPVTPLHERMTMVK 113
Query: 67 AIRYVDDVVIGEPGEISLELIKKL 90
A+++VD+V+ P I+ + +KKL
Sbjct: 114 AVKWVDEVISDAPYAITEDFMKKL 137
Score = 72.6 bits (175), Expect = 2e-12
Identities = 47/137 (34%), Positives = 76/137 (55%), Gaps = 6/137 (4%)
Query: 9 VVVGGVFDILHVGHIHFLKMAKELGDELIVIVAHDETVKKRKG--RPPINPAEDRAEVLR 66
+ + G FD+ H GH+ L+ A+ELGD L+V + +D+TV ++G RP +N E VL
Sbjct: 257 IYIDGAFDLFHAGHVEILRRARELGDFLLVGIHNDQTVSAKRGAHRPIMNLHERSLSVL- 315
Query: 67 AIRYVDDVVIGEPGEISLELIKKLKPDVIALGP-DQDFDCRTLKEKLRSIGLKVEVIRLP 125
A RYVD+V+IG P E+S + I ++ G + D R ++ S+ + + + ++
Sbjct: 316 ACRYVDEVIIGAPWEVSRDTITTFDISLVVHGTVAESDDFRKEEDNPYSVPISMGIFQV- 374
Query: 126 YLYKEDRAKTSKIIKRI 142
L TS II+RI
Sbjct: 375 -LDSPLDITTSTIIRRI 390
>gi|4505651 phosphate cytidylyltransferase 2, ethanolamine [Homo sapiens]
>gi|1817548|dbj|BAA12311.1| (D84307) phosphoethanolamine
cytidylyltransferase [Homo sapiens]
Length = 389
Score = 72.6 bits (175), Expect = 2e-12
Identities = 43/116 (37%), Positives = 66/116 (56%), Gaps = 3/116 (2%)
Query: 3 GNRRIRVVVGGVFDILHVGHIHFLKMAKELGDELIVIVAHDETVKKRKGRPPINPAEDRA 62
G R +RV G +D++H GH + L+ A+ +GD LIV V DE + K KG PP+ E+R
Sbjct: 19 GRRAVRVWCDGCYDMVHYGHSNQLRQARAMGDYLIVGVHTDEEIAKHKG-PPVFTQEERY 77
Query: 63 EVLRAIRYVDDVVIGEPGEISLELIKKLKPDVIALGPD--QDFDCRTLKEKLRSIG 116
++++AI++VD+VV P +LE + K D G D D R E+++ G
Sbjct: 78 KMVQAIKWVDEVVPAAPYVTTLETLDKYNCDFCVHGNDITLTVDGRDTYEEVKQAG 133
>pir||T34841 probable bifunctional synthase /transferase - Streptomyces
coelicolor >gi|4455732|emb|CAB36595.1| (AL035478)
putative bifunctional synthase /transferase
[Streptomyces coelicolor A3(2)]
Length = 463
Score = 72.6 bits (175), Expect = 2e-12
Identities = 40/93 (43%), Positives = 56/93 (60%), Gaps = 2/93 (2%)
Query: 9 VVVGGVFDILHVGHIHFLKMAKELGDELIVIVAHDETVKKRK-GRPPINPAEDRAEVLRA 67
V GG FD+LH GH+ L+ A+ LGD L+V V D +V++ K G P+NP DR VLRA
Sbjct: 330 VAAGGCFDLLHAGHVGLLQAARRLGDCLVVCVNSDASVRRGKGGGRPVNPLADRVRVLRA 389
Query: 68 IRYVDDVVIGEPGEISLELIKKLKPDVIALGPD 100
+ VD V + + + L+ +L+PDV G D
Sbjct: 390 LACVDAVAVFDE-DTPERLLGELRPDVWVKGGD 421
>gi|11427388 phosphate cytidylyltransferase 2, ethanolamine [Homo sapiens]
Length = 373
Score = 72.6 bits (175), Expect = 2e-12
Identities = 43/116 (37%), Positives = 66/116 (56%), Gaps = 3/116 (2%)
Query: 3 GNRRIRVVVGGVFDILHVGHIHFLKMAKELGDELIVIVAHDETVKKRKGRPPINPAEDRA 62
G R +RV G +D++H GH + L+ A+ +GD LIV V DE + K KG PP+ E+R
Sbjct: 41 GRRAVRVWCDGCYDMVHYGHSNQLRQARAMGDYLIVGVHTDEEIAKHKG-PPVFTQEERY 99
Query: 63 EVLRAIRYVDDVVIGEPGEISLELIKKLKPDVIALGPD--QDFDCRTLKEKLRSIG 116
++++AI++VD+VV P +LE + K D G D D R E+++ G
Sbjct: 100 KMVQAIKWVDEVVPAAPYVTTLETLDKYNCDFCVHGNDITLTVDGRDTYEEVKQAG 155
>gb|AAC28864.1| (AF080568) CTP:phosphoethanolamine cytidylyltransferase [Rattus
norvegicus]
Length = 404
Score = 71.8 bits (173), Expect = 4e-12
Identities = 43/116 (37%), Positives = 66/116 (56%), Gaps = 3/116 (2%)
Query: 3 GNRRIRVVVGGVFDILHVGHIHFLKMAKELGDELIVIVAHDETVKKRKGRPPINPAEDRA 62
G R +RV G +D++H GH + L+ A+ +GD LIV V DE + K KG PP+ E+R
Sbjct: 19 GQRTVRVWCDGCYDMVHYGHSNQLRQARAMGDYLIVGVHTDEEIAKHKG-PPVFTQEERY 77
Query: 63 EVLRAIRYVDDVVIGEPGEISLELIKKLKPDVIALGPD--QDFDCRTLKEKLRSIG 116
++++AI++VD+VV P +LE + K D G D D R E+++ G
Sbjct: 78 KMVQAIKWVDEVVPAAPYVTTLETLDKHNCDFCVHGNDITLTVDGRDTYEEVKQAG 133
>pir||C71887 probable adp-d-glycero-d-mannoheptose synthase - Helicobacter
pylori (strain J99) >gi|4155356|gb|AAD06368.1|
(AE001509) putative ADP-D-glycero-D-mannoheptose
synthase [Helicobacter pylori J99]
Length = 463
Score = 70.2 bits (169), Expect = 1e-11
Identities = 42/99 (42%), Positives = 63/99 (63%), Gaps = 4/99 (4%)
Query: 4 NRRIRVVVGGVFDILHVGHIHFLKMAKELGDELIVIVAHDETVKKRKG-RPPINPAEDRA 62
N++ V G FDILH GH +L+ AK LGD L+V + D ++K+ KG + PI +DRA
Sbjct: 328 NQQKIVFTNGCFDILHKGHASYLQKAKALGDILVVGLNSDNSIKRLKGDKRPIVSEKDRA 387
Query: 63 EVLRAIRYVDDVVI-GEPGEISLELIKKLKPDVIALGPD 100
+L ++ VD VV+ GE + ++LI+ LKPD++ G D
Sbjct: 388 FLLASLSCVDYVVVFGE--DTPIKLIQALKPDILVKGAD 424
>pir||C81009 aut protein NMB2076 [imported] - Neisseria meningitidis (group B
strain MD58) >gi|7227339|gb|AAF42395.1| (AE002557) aut
protein [Neisseria meningitidis MC58]
Length = 168
Score = 69.9 bits (168), Expect = 1e-11
Identities = 41/129 (31%), Positives = 70/129 (53%), Gaps = 5/129 (3%)
Query: 9 VVVGGVFDILHVGHIHFLKMAKELGDELIVIVAHDETVKK--RKGRPPINPAEDRAEVLR 66
V G FDILH GH+ +L A+ +GD L++ + D +V++ + G P+NP E+RA V
Sbjct: 32 VFTNGCFDILHRGHVTYLAQARSMGDALVLALNTDASVRRLGKGGDRPVNPLENRAAVAA 91
Query: 67 AIRYVDDVVIGEPGEISLELIKKLKPDVIALGPDQDFDCRTLKEKLRSIGLKVEVIRLPY 126
A+ V D+V G+ LI+ +KP+++ G D D + ++ +V +P+
Sbjct: 92 ALESV-DLVTWFDGDTPAALIEAVKPEILVKGGDWAAD--KIVGAAETLARGGQVFSIPF 148
Query: 127 LYKEDRAKT 135
L++ KT
Sbjct: 149 LHQTSTTKT 157
>sp|O25529|RFAE_HELPY ADP-HEPTOSE SYNTHASE >gi|7429269|pir||B64627 ADP-heptose synthase -
Helicobacter pylori (strain 26695)
>gi|2313990|gb|AAD07904.1| (AE000596) ADP-heptose
synthase (rfaE) [Helicobacter pylori 26695]
Length = 461
Score = 69.5 bits (167), Expect = 2e-11
Identities = 39/93 (41%), Positives = 59/93 (62%), Gaps = 2/93 (2%)
Query: 9 VVVGGVFDILHVGHIHFLKMAKELGDELIVIVAHDETVKKRKG-RPPINPAEDRAEVLRA 67
+ G FD+LH GH +L+ AK LGD LIV + D ++K+ KG + PI +DRA +L +
Sbjct: 331 IFTNGCFDLLHKGHASYLQKAKALGDILIVGLNSDASIKRLKGDKRPIVSEKDRAFLLAS 390
Query: 68 IRYVDDVVIGEPGEISLELIKKLKPDVIALGPD 100
+ VD VV+ E + ++LI+ LKPD++ G D
Sbjct: 391 LSCVDYVVVFEE-DTPIKLIQALKPDILVKGAD 422
>gb|AAF53257.1| (AE003639) CG5547 gene product [alt 2] [Drosophila melanogaster]
Length = 363
Score = 68.7 bits (165), Expect = 3e-11
Identities = 39/91 (42%), Positives = 55/91 (59%), Gaps = 1/91 (1%)
Query: 9 VVVGGVFDILHVGHIHFLKMAKELGDELIVIVAHDETVKKRKG-RPPINPAEDRAEVLRA 67
V V G FD+ HVGH+ FL+ AK+LGD LIV + D V KG PI +R + A
Sbjct: 197 VYVAGAFDLFHVGHLDFLEKAKKLGDYLIVGLHTDPVVNSYKGSNYPIMNLHERVLSVLA 256
Query: 68 IRYVDDVVIGEPGEISLELIKKLKPDVIALG 98
++V++VVIG P ++ EL++ K DV+ G
Sbjct: 257 CKFVNEVVIGAPYCVTEELLEHFKIDVVCHG 287
>gb|AAF53258.1| (AE003639) CG5547 gene product [alt 1] [Drosophila melanogaster]
Length = 206
Score = 68.7 bits (165), Expect = 3e-11
Identities = 39/91 (42%), Positives = 55/91 (59%), Gaps = 1/91 (1%)
Query: 9 VVVGGVFDILHVGHIHFLKMAKELGDELIVIVAHDETVKKRKG-RPPINPAEDRAEVLRA 67
V V G FD+ HVGH+ FL+ AK+LGD LIV + D V KG PI +R + A
Sbjct: 40 VYVAGAFDLFHVGHLDFLEKAKKLGDYLIVGLHTDPVVNSYKGSNYPIMNLHERVLSVLA 99
Query: 68 IRYVDDVVIGEPGEISLELIKKLKPDVIALG 98
++V++VVIG P ++ EL++ K DV+ G
Sbjct: 100 CKFVNEVVIGAPYCVTEELLEHFKIDVVCHG 130
>gb|AAG02371.1|AF210249_31 (AF210249) sugar synthase BlmC [Streptomyces verticillus]
Length = 498
Score = 67.9 bits (163), Expect = 6e-11
Identities = 43/100 (43%), Positives = 60/100 (60%), Gaps = 3/100 (3%)
Query: 2 AGNRRIRVVVGGVFDILHVGHIHFLKMAKELGDELIVIVAHDETVKKRKG-RPPINPAED 60
A +RR+ V G FD+LH GH+ L AKELGD L+V V D +V++ KG R P+ P +
Sbjct: 352 ARDRRV-VFTNGCFDLLHGGHVSCLSRAKELGDLLVVGVNSDASVRRLKGPRRPVIPLAE 410
Query: 61 RAEVLRAIRYVDDVVIGEPGEISLELIKKLKPDVIALGPD 100
R VL A+ V D+V+ + LI+ L+P+V A G D
Sbjct: 411 RMRVLAALSCV-DLVVPFDDDSPAALIEALRPEVYAKGGD 449
>pir||I39548 aut protein - Alcaligenes eutrophus >gi|555666|gb|AAA50211.1|
(U07639) Aut [Ralstonia eutropha]
Length = 164
Score = 67.5 bits (162), Expect = 7e-11
Identities = 48/138 (34%), Positives = 74/138 (52%), Gaps = 8/138 (5%)
Query: 9 VVVGGVFDILHVGHIHFLKMAKELGDELIVIVAHDETVKK--RKGRPPINPAEDRAEVLR 66
V GVFDILH GH +L A+ LG L+V V D +VK + P+N DR +L
Sbjct: 31 VFTNGVFDILHRGHATYLAQARALGASLVVGVNSDASVKMLGKGDDRPLNHESDRMALLA 90
Query: 67 AIRYVDDVVIGEPGEISLELIKKLKPDVIALGPDQDFDCRTLKEKLRSIGLKVEVIRLPY 126
A+ VD V + + +ELI+ ++PD+ G D D D +RS G + +P+
Sbjct: 91 ALESVDLVAMFRE-QTPVELIRLVRPDIYVKGGDYDIDTLEETRLVRSWG--GQAYAIPF 147
Query: 127 LYKEDRAKTSKIIKRITE 144
L+ DR+ T+K++ R+ +
Sbjct: 148 LH--DRS-TTKLLTRVRQ 162
>sp|O05074|RFAE_HAEIN ADP-HEPTOSE SYNTHASE >gi|1073895|pir||C64127 ADP-heptose synthase
homolog - Haemophilus influenzae (strain Rd KW20)
>gi|1574367|gb|AAC23172.1| (U32828) ADP-heptose synthase
(rfaE) [Haemophilus influenzae Rd]
Length = 476
Score = 67.5 bits (162), Expect = 7e-11
Identities = 46/135 (34%), Positives = 75/135 (55%), Gaps = 7/135 (5%)
Query: 9 VVVGGVFDILHVGHIHFLKMAKELGDELIVIVAHDETVKKRKGRP-PINPAEDRAEVLRA 67
V+ G FDILH GHI +L+ A++LGD LIV V D++VK+ KG PIN E+R VL
Sbjct: 343 VMTNGCFDILHPGHISYLENARKLGDRLIVAVNSDDSVKRLKGESRPINNLENRMAVLAG 402
Query: 68 IRYVDDVVIGEPGEISLELIKKLKPDVIALGPDQDFDCRTLKEKLRSIGLKVEVIRLPYL 127
+ V D ++ + LI ++ PD++ G D + +++ + G V+V+
Sbjct: 403 LASV-DWLVPFTEDTPQRLIGEILPDLLVKGGDYKPEEIAGSKEVWANGGDVKVLNF--- 458
Query: 128 YKEDRAKTSKIIKRI 142
E+ T+ +I++I
Sbjct: 459 --ENGCSTTNVIEKI 471
>pir||G82031 probable transferase NMA0356 [imported] - Neisseria meningitidis
(group A strain Z2491) >gi|7379109|emb|CAB83658.1|
(AL162752) putative transferase [Neisseria meningitidis
Z2491]
Length = 168
Score = 67.5 bits (162), Expect = 7e-11
Identities = 41/129 (31%), Positives = 69/129 (52%), Gaps = 5/129 (3%)
Query: 9 VVVGGVFDILHVGHIHFLKMAKELGDELIVIVAHDETVKK--RKGRPPINPAEDRAEVLR 66
V G FDILH GH+ +L A+ +G L++ + D +V++ + G PINP E+RA V
Sbjct: 32 VFTNGCFDILHRGHVTYLAQARSMGGALVLALNTDASVRRLGKGGDRPINPLENRAAVAA 91
Query: 67 AIRYVDDVVIGEPGEISLELIKKLKPDVIALGPDQDFDCRTLKEKLRSIGLKVEVIRLPY 126
A+ V D+V G+ LI+ +KP+++ G D D + ++ +V +P+
Sbjct: 92 ALESV-DLVTWFDGDTPAALIEAVKPEILVKGGDWAAD--KIVGAAETLARGGQVFSIPF 148
Query: 127 LYKEDRAKT 135
L++ KT
Sbjct: 149 LHQTSTTKT 157
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.323 0.145 0.414
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 52958187
Number of Sequences: 2977
Number of extensions: 2063701
Number of successful extensions: 6214
Number of sequences better than 1.0e-10: 29
Number of HSP's better than 0.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 26
Number of HSP's that attempted gapping in prelim test: 6160
Number of HSP's gapped (non-prelim): 34
length of query: 148
length of database: 189,106,746
effective HSP length: 51
effective length of query: 97
effective length of database: 158,583,909
effective search space: 15382639173
effective search space used: 15382639173
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.9 bits)
S2: 161 (67.1 bits)