BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB1515 (PAB1515) DE:Hypothetical protein
(375 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||F75039 hypothetical protein PAB1515 - Pyrococcus abyssi (st... 775 0.0
pir||H71123 hypothetical protein PH0759 - Pyrococcus horikoshii ... 762 0.0
gi|11499037 conserved hypothetical protein [Archaeoglobus fulgid... 579 e-164
pir||F72711 hypothetical protein APE1109 - Aeropyrum pernix (str... 515 e-145
pir||D69092 conserved hypothetical protein MTH1686 - Methanobact... 503 e-141
emb|CAC12548.1| (AL445067) conserved hypothetical protein [Therm... 495 e-139
sp|Q57747|Y299_METJA HYPOTHETICAL PROTEIN MJ0299 >gi|2127711|pir... 476 e-133
gb|AAK40625.1| Conserved hypothetical protein [Sulfolobus solfat... 464 e-130
pir||A70454 conserved hypothetical protein aq_1790 - Aquifex aeo... 456 e-127
pir||S11602 hypothetical protein 1 (16S rRNA 5' region) - Thermo... 238 8e-62
>pir||F75039 hypothetical protein PAB1515 - Pyrococcus abyssi (strain Orsay)
>gi|5458724|emb|CAB50211.1| (AJ248287) hypothetical
protein [Pyrococcus abyssi]
Length = 375
Score = 775 bits (1980), Expect = 0.0
Identities = 375/375 (100%), Positives = 375/375 (100%)
Query: 1 MAVGEKITISVIKADVGGWPGHSRVHPALIEKAKEVLSEAQKEGTIIDFYVTYAGDDLQL 60
MAVGEKITISVIKADVGGWPGHSRVHPALIEKAKEVLSEAQKEGTIIDFYVTYAGDDLQL
Sbjct: 1 MAVGEKITISVIKADVGGWPGHSRVHPALIEKAKEVLSEAQKEGTIIDFYVTYAGDDLQL 60
Query: 61 IMTHKKGVDSPEVHGLAWEAFKKATEVAKELALYGAGQDLLKDAFSGNVRGLGPSVAEME 120
IMTHKKGVDSPEVHGLAWEAFKKATEVAKELALYGAGQDLLKDAFSGNVRGLGPSVAEME
Sbjct: 61 IMTHKKGVDSPEVHGLAWEAFKKATEVAKELALYGAGQDLLKDAFSGNVRGLGPSVAEME 120
Query: 121 ITLRKSEPIVTFHLDKTEPGAFNLPIFRMFADPFNTAGLVIDPKMHMGFRFEIWDILEHK 180
ITLRKSEPIVTFHLDKTEPGAFNLPIFRMFADPFNTAGLVIDPKMHMGFRFEIWDILEHK
Sbjct: 121 ITLRKSEPIVTFHLDKTEPGAFNLPIFRMFADPFNTAGLVIDPKMHMGFRFEIWDILEHK 180
Query: 181 KVIMNSPEEMYDILALIGAKGRYVIKRVYPKEGHPIPKDEPVAVVSTEKLYEVAGEYVGK 240
KVIMNSPEEMYDILALIGAKGRYVIKRVYPKEGHPIPKDEPVAVVSTEKLYEVAGEYVGK
Sbjct: 181 KVIMNSPEEMYDILALIGAKGRYVIKRVYPKEGHPIPKDEPVAVVSTEKLYEVAGEYVGK 240
Query: 241 DDPVAIVRAQSGLPALGEVLEPFAFPHLVSGWMRGSHNGPLMPVPLKYATPTRFDGPPRA 300
DDPVAIVRAQSGLPALGEVLEPFAFPHLVSGWMRGSHNGPLMPVPLKYATPTRFDGPPRA
Sbjct: 241 DDPVAIVRAQSGLPALGEVLEPFAFPHLVSGWMRGSHNGPLMPVPLKYATPTRFDGPPRA 300
Query: 301 VALGWQISPEGKLIGPVDLFDDPAFDWARQKALEITDYMRRHGPFEPHRLPLEEMEYTTL 360
VALGWQISPEGKLIGPVDLFDDPAFDWARQKALEITDYMRRHGPFEPHRLPLEEMEYTTL
Sbjct: 301 VALGWQISPEGKLIGPVDLFDDPAFDWARQKALEITDYMRRHGPFEPHRLPLEEMEYTTL 360
Query: 361 PGVLEKLKDRFEPIE 375
PGVLEKLKDRFEPIE
Sbjct: 361 PGVLEKLKDRFEPIE 375
>pir||H71123 hypothetical protein PH0759 - Pyrococcus horikoshii
>gi|3257167|dbj|BAA29850.1| (AP000003) 390aa long
hypothetical protein [Pyrococcus horikoshii]
Length = 390
Score = 762 bits (1946), Expect = 0.0
Identities = 367/375 (97%), Positives = 371/375 (98%)
Query: 1 MAVGEKITISVIKADVGGWPGHSRVHPALIEKAKEVLSEAQKEGTIIDFYVTYAGDDLQL 60
MAVGEKITISVIKADVGGWPGHSRVHPALIEKA+EVLSEAQK GTIIDFYVTYAGDDLQL
Sbjct: 16 MAVGEKITISVIKADVGGWPGHSRVHPALIEKAREVLSEAQKNGTIIDFYVTYAGDDLQL 75
Query: 61 IMTHKKGVDSPEVHGLAWEAFKKATEVAKELALYGAGQDLLKDAFSGNVRGLGPSVAEME 120
IMTHKKGVDSPEVHGLAWEAFKKATEVAKEL LYGAGQDLLKDAFSGNVRGLGPSVAEME
Sbjct: 76 IMTHKKGVDSPEVHGLAWEAFKKATEVAKELGLYGAGQDLLKDAFSGNVRGLGPSVAEME 135
Query: 121 ITLRKSEPIVTFHLDKTEPGAFNLPIFRMFADPFNTAGLVIDPKMHMGFRFEIWDILEHK 180
ITLRKSEPIVTFHLDKTEPGAFNLPIFRMFADPFNTAGLVIDPKMHMGFRFEIWDILEHK
Sbjct: 136 ITLRKSEPIVTFHLDKTEPGAFNLPIFRMFADPFNTAGLVIDPKMHMGFRFEIWDILEHK 195
Query: 181 KVIMNSPEEMYDILALIGAKGRYVIKRVYPKEGHPIPKDEPVAVVSTEKLYEVAGEYVGK 240
KVIM+SPEEMYDILALIGAK RYVIKRVYPKEGHP+PKDEPVAVVSTEKLYEVAGEYVGK
Sbjct: 196 KVIMSSPEEMYDILALIGAKSRYVIKRVYPKEGHPVPKDEPVAVVSTEKLYEVAGEYVGK 255
Query: 241 DDPVAIVRAQSGLPALGEVLEPFAFPHLVSGWMRGSHNGPLMPVPLKYATPTRFDGPPRA 300
DDPVAIVRAQSGLPALGEVLEPFAFPHLVSGWMRGSHNGPLMPVPLKYATPTRFDGPPRA
Sbjct: 256 DDPVAIVRAQSGLPALGEVLEPFAFPHLVSGWMRGSHNGPLMPVPLKYATPTRFDGPPRA 315
Query: 301 VALGWQISPEGKLIGPVDLFDDPAFDWARQKALEITDYMRRHGPFEPHRLPLEEMEYTTL 360
VALGWQISPEGKLIGPVDLFDDPAFDWARQKALEITDY+RRHGPFEPHRLP EEMEYTTL
Sbjct: 316 VALGWQISPEGKLIGPVDLFDDPAFDWARQKALEITDYIRRHGPFEPHRLPSEEMEYTTL 375
Query: 361 PGVLEKLKDRFEPIE 375
PGVLEKLKDRFEPIE
Sbjct: 376 PGVLEKLKDRFEPIE 390
>gi|11499037 conserved hypothetical protein [Archaeoglobus fulgidus]
>gi|7483125|pir||A69430 conserved hypothetical protein
AF1442 - Archaeoglobus fulgidus
>gi|2649129|gb|AAB89806.1| (AE001004) conserved
hypothetical protein [Archaeoglobus fulgidus]
Length = 370
Score = 579 bits (1476), Expect = e-164
Identities = 277/369 (75%), Positives = 313/369 (84%), Gaps = 1/369 (0%)
Query: 6 KITISVIKADVGGWPGHSRVHPALIEKAKEVLSEAQKEGTIIDFYVTYAGDDLQLIMTHK 65
K+T+S+IKADVG GH+ V L + A+E L A G IIDF V AGDDL+L+MTH
Sbjct: 3 KVTVSLIKADVGSVAGHTTVPDELKKAAEENLKNAVDSGLIIDFRVFNAGDDLELLMTHD 62
Query: 66 KGVDSPEVHGLAWEAFKKATEVAKELALYGAGQDLLKDAFSGNVRGLGPSVAEMEITLRK 125
KGVDS E+H LAWE F+KA +AKEL LYGAGQDLLKDAFSGNVRGLGP VAEME T RK
Sbjct: 63 KGVDSEEIHRLAWETFEKAAGIAKELKLYGAGQDLLKDAFSGNVRGLGPGVAEMEFTERK 122
Query: 126 SEPIVTFHLDKTEPGAFNLPIFRMFADPFNTAGLVIDPKMHMGFRFEIWDILEHKKVIMN 185
+EP++ F +DKTEPGAFN+PIFRMFADPFNTAGLVIDP MH GF FEIWDI E K+V M
Sbjct: 123 AEPVIAFMMDKTEPGAFNMPIFRMFADPFNTAGLVIDPTMHQGFVFEIWDIKESKRVFMR 182
Query: 186 SPEEMYDILALIGAKGRYVIKRVYPKEGHPIPKDEPVAVVSTEKLYEVAGEYVGKDDPVA 245
+PEEMYDILALIG K R+VIKRVYPKEG +P DEPVAV+STEKLYEVAGEYVGKDDPVA
Sbjct: 183 TPEEMYDILALIGGKSRFVIKRVYPKEGGKLPADEPVAVISTEKLYEVAGEYVGKDDPVA 242
Query: 246 IVRAQSGLPALGEVLEPFAFPHLVSGWMRGSHNGPLMPVPLKYATPTRFDGPPRAVALGW 305
+VRAQSGLPA+GEVLEPFAFPHLVSGWMRGSHNGP+MPVP KY+ TRFDGPPR +A G+
Sbjct: 243 LVRAQSGLPAVGEVLEPFAFPHLVSGWMRGSHNGPIMPVPFKYSKCTRFDGPPRCIAAGF 302
Query: 306 QISPEGKLIGPVDLFDDPAFDWARQKALEITDYMRRHGPFEPHRLPLEEMEYTTLPGVLE 365
Q++ GK+IGPVD+FDDPAFD+ RQKA+EI +YMRRHGPFEPHRLP E+MEYTTLP VLE
Sbjct: 303 QLA-NGKIIGPVDMFDDPAFDYTRQKAMEIAEYMRRHGPFEPHRLPSEDMEYTTLPKVLE 361
Query: 366 KLKDRFEPI 374
KLK RFE +
Sbjct: 362 KLKGRFEEV 370
>pir||F72711 hypothetical protein APE1109 - Aeropyrum pernix (strain K1)
>gi|5104779|dbj|BAA80094.1| (AP000060) 418aa long
hypothetical protein [Aeropyrum pernix]
Length = 418
Score = 515 bits (1312), Expect = e-145
Identities = 252/375 (67%), Positives = 299/375 (79%), Gaps = 6/375 (1%)
Query: 1 MAVGEKITISVIKADVGGWPGHSRVHPALIEKAKEVLSEAQKEGTIIDFYVTYAGDDLQL 60
++ G T+SVIKAD+G GH RVHP I A VL+EA+++G I FYVT AGDDLQL
Sbjct: 32 LSEGRTTTVSVIKADIGSLAGHHRVHPDTILAASRVLAEAKRKGVIKSFYVTNAGDDLQL 91
Query: 61 IMTHKKGVDSPEVHGLAWEAFKKATEVAKELALYGAGQDLLKDAFSGNVRGLGPSVAEME 120
IMTH KGVD+PE+H LAW AF++AT+VAK+L LY AGQDLL DAFSGN+RGLGP VAEME
Sbjct: 92 IMTHFKGVDNPEIHELAWTAFREATKVAKDLGLYAAGQDLLSDAFSGNIRGLGPGVAEME 151
Query: 121 ITLRKSEPIVTFHLDKTEPGAFNLPIFRMFADPFNTAGLVIDPKMHMGFRFEIWDILEHK 180
R SEPIV F DKTEPGAFNLP++++FADPFNTAGLVIDP++H GF FE+ D+ E K
Sbjct: 152 FVERPSEPIVVFMADKTEPGAFNLPLYKIFADPFNTAGLVIDPRLHDGFIFEVLDVFEGK 211
Query: 181 KVIMNSPEEMYDILALIGAKGRYVIKRVYPKEGHPIPKDEPVAVVSTEKLYEVAGEYVGK 240
V + +PEE+YD+LALIG RYV+KRVY K I AVVS+E+L +AG YVGK
Sbjct: 212 AVELRAPEEIYDLLALIGTPSRYVVKRVYRKSDREI-----AAVVSSERLSLIAGRYVGK 266
Query: 241 DDPVAIVRAQSGLPALGEVLEPFAFPHLVSGWMRGSHNGPLMPVPLKYATPTRFDGPPRA 300
DDPV IVRAQSG PA+GEVLEPFAFPHLV+GWMRGSH+GPLMPV LK + +RFDGPPR
Sbjct: 267 DDPVMIVRAQSGFPAVGEVLEPFAFPHLVAGWMRGSHHGPLMPVGLKDSKVSRFDGPPRV 326
Query: 301 VALGWQISPEGKLIGPVDLFDDPAFDWARQKALEITDYMRRHGPFEPHRLPLEEMEYTTL 360
+ALG+Q+ G+LIGP DLFDDPAFD AR++A I DY+RRHGPF PHRL EEMEYTTL
Sbjct: 327 IALGFQVK-NGELIGPADLFDDPAFDEARRQAQMIADYIRRHGPFMPHRLGPEEMEYTTL 385
Query: 361 PGVLEKLKDRFEPIE 375
P VL++LKDRF+P+E
Sbjct: 386 PEVLKRLKDRFKPVE 400
>pir||D69092 conserved hypothetical protein MTH1686 - Methanobacterium
thermoautotrophicum (strain Delta H)
>gi|2622816|gb|AAB86158.1| (AE000926) conserved protein
[Methanobacterium thermoautotrophicum]
Length = 365
Score = 503 bits (1282), Expect = e-141
Identities = 238/370 (64%), Positives = 296/370 (79%), Gaps = 6/370 (1%)
Query: 6 KITISVIKADVGGWPGHSRVHPALIEKAKEVLSEAQKEGTIIDFYVTYAGDDLQLIMTHK 65
K TISVIKADVG GH+ H AL +K E+L+ A++ G + D+Y+T GDD+ LIMTH+
Sbjct: 2 KTTISVIKADVGSVAGHAVAHEALKKKCDEILAGAKETGILEDYYITNCGDDIDLIMTHR 61
Query: 66 KGVDSPEVHGLAWEAFKKATEVAKELALYGAGQDLLKDAFSGNVRGLGPSVAEMEITLRK 125
G ++ EVH AW AF++AT+VA+ L LYGAGQDLL D FSGN++G+GP AEME R
Sbjct: 62 NGEENEEVHQTAWNAFREATDVARGLKLYGAGQDLLSDTFSGNIKGMGPGCAEMEFKERP 121
Query: 126 SEPIVTFHLDKTEPGAFNLPIFRMFADPFNTAGLVIDPKMHMGFRFEIWDILEHKKVIMN 185
S+P++ F DKTEPGAFNLP+FRMFADPFNTAGLVIDP +H G+ FE++D++EHKKV M
Sbjct: 122 SDPVIIFCCDKTEPGAFNLPLFRMFADPFNTAGLVIDPSLHNGYEFEVFDVVEHKKVTMA 181
Query: 186 SPEEMYDILALIGAKGRYVIKRVYPKEGHPIPKDEPVAVVSTEKLYEVAGEYVGKDDPVA 245
P+EMYD+LAL+G+ RYVIKR++ ++ E A VSTE+L +AG+Y+GKDDPVA
Sbjct: 182 CPDEMYDLLALLGSISRYVIKRIHRRD-----DGEIAASVSTERLNLMAGKYIGKDDPVA 236
Query: 246 IVRAQSGLPALGEVLEPFAFPHLVSGWMRGSHNGPLMPVPLKYATPTRFDGPPRAVALGW 305
IVRAQSG PA GEV+EPFAFPHLV GWMRGSHNGPLMPV + ATP RFDGPPR +ALG+
Sbjct: 237 IVRAQSGFPAAGEVVEPFAFPHLVGGWMRGSHNGPLMPVAQRDATPVRFDGPPRVIALGF 296
Query: 306 QISPEGKLIGPVDLFDDPAFDWARQKALEITDYMRRHGPFEPHRLPLEEMEYTTLPGVLE 365
Q++ + KL+GPVD+FDDP+FD +RQ A E+ +YMRRHGPFEPHRLP +EMEYT+LPGVLE
Sbjct: 297 QVA-DCKLVGPVDMFDDPSFDRSRQLASEVAEYMRRHGPFEPHRLPSDEMEYTSLPGVLE 355
Query: 366 KLKDRFEPIE 375
KL DRFE +E
Sbjct: 356 KLGDRFEDME 365
>emb|CAC12548.1| (AL445067) conserved hypothetical protein [Thermoplasma
acidophilum]
Length = 375
Score = 495 bits (1262), Expect = e-139
Identities = 240/370 (64%), Positives = 293/370 (78%), Gaps = 2/370 (0%)
Query: 6 KITISVIKADVGGWPGHSRVHPALIEKAKEVLSEAQKEGTIIDFYVTYAGDDLQLIMTHK 65
K+TIS IKAD+G PGHS V ++ + +E + + K I DF + + GDD Q+ M H
Sbjct: 2 KVTISHIKADIGSLPGHSIVDEKVMARIQEYIEDHGKN-LISDFRMAHVGDDAQITMVHT 60
Query: 66 KGVDSPEVHGLAWEAFKKATEVAKELALYGAGQDLLKDAFSGNVRGLGPSVAEMEITLRK 125
KG+DS E+H LAW AFK TEVAK+L LYGAGQDLLKD+FSGN++G+GP VAEMEI R
Sbjct: 61 KGIDSSEIHELAWNAFKAGTEVAKKLGLYGAGQDLLKDSFSGNLKGMGPGVAEMEINERP 120
Query: 126 SEPIVTFHLDKTEPGAFNLPIFRMFADPFNTAGLVIDPKMHMGFRFEIWDILEHKKVIMN 185
SEP + + +DKTEPGAFNLPI++MFADPFNT GLVID MH GFRFE+WD++EHK + ++
Sbjct: 121 SEPFIVYMMDKTEPGAFNLPIYKMFADPFNTPGLVIDEAMHSGFRFEVWDVIEHKAIFLD 180
Query: 186 SPEEMYDILALIGAKGRYVIKRVYPKEGHPIPKDEPVAVVSTEKLYEVAGEYVGKDDPVA 245
+PE +YD+LALIG+K RYVIKRVY K+ + +E VAV+ST+KL +AG+YVGKDDP A
Sbjct: 181 APEYLYDLLALIGSKERYVIKRVYTKKENKKLPEENVAVISTDKLSLIAGKYVGKDDPAA 240
Query: 246 IVRAQSGLPALGEVLEPFAFPHLVSGWMRGSHNGPLMPVPLKYATPTRFDGPPRAVALGW 305
+VR QSGLPA GE LE FAFP+LVSGWMRGS NGPLMPV +K A TRFDGPPR VALG+
Sbjct: 241 VVRIQSGLPAAGESLEAFAFPYLVSGWMRGSFNGPLMPVGMKDAKMTRFDGPPRVVALGY 300
Query: 306 QISPEGKLIGPVDLFDDPAFDWARQKALEITDYMRRHGPFEPHRLPLEEMEYTTLPGVLE 365
+ GKL GPVD+FDDPAFD+AR+ A E+TD++RR GPFEPHRLP +EMEYTTLP V+E
Sbjct: 301 -VLKSGKLEGPVDMFDDPAFDYARRVAGEMTDHLRRMGPFEPHRLPDQEMEYTTLPVVME 359
Query: 366 KLKDRFEPIE 375
KLKDRF IE
Sbjct: 360 KLKDRFVDIE 369
>sp|Q57747|Y299_METJA HYPOTHETICAL PROTEIN MJ0299 >gi|2127711|pir||D64337 16S rRNA
5'-region hypothetical protein 1 homolog - Methanococcus
jannaschii >gi|1591022|gb|AAB98286.1| (U67485) conserved
hypothetical protein [Methanococcus jannaschii]
Length = 389
Score = 476 bits (1213), Expect = e-133
Identities = 242/370 (65%), Positives = 285/370 (76%), Gaps = 7/370 (1%)
Query: 6 KITISVIKADVGGWPGHSRVHPALIEKAKEVLSEAQKEGTIIDFYVTYAGDDLQLIMTHK 65
K+TISVIKADVGG GH+ L+E + VL EA E I+D+YVT GDD+ LIM+HK
Sbjct: 8 KVTISVIKADVGGLCGHTLAPDELLEACEAVLEEAVDE-IILDYYVTRCGDDIDLIMSHK 66
Query: 66 KGVDSPEVHGLAWEAFKKATEVAKELALYGAGQDLLKDAFSGNVRGLGPSVAEMEITLRK 125
G D+ +VHGLAW AF++AT+VAKEL LYGAGQDLL D+FSGNVRG+GP AEME RK
Sbjct: 67 LGCDNEKVHGLAWRAFEEATKVAKELKLYGAGQDLLADSFSGNVRGMGPGCAEMEFVERK 126
Query: 126 SEPIVTFHLDKTEPGAFNLPIFRMFADPFNTAGLVIDPKMHMGFRFEIWDILEHKKVIMN 185
SEPIV F DKT+P AFN P+F+MFADPFNTAGLV DP M GF+FE+ D++ HKKV ++
Sbjct: 127 SEPIVVFCCDKTDPTAFNYPLFKMFADPFNTAGLVFDPSMISGFKFEVHDVVGHKKVFLD 186
Query: 186 SPEEMYDILALIGAKGRYVIKRVYPKEGHPIPKDEPVAVVSTEKLYEVAGEYVGKDDPVA 245
+PEEMY +LALIG +Y IKRVY + + I AVVSTEKL +AGEYVGKDDPVA
Sbjct: 187 TPEEMYMLLALIGDYEKYAIKRVYRRRDNEI-----AAVVSTEKLNYIAGEYVGKDDPVA 241
Query: 246 IVRAQSGLPALGEVLEPFAFPHLVSGWMRGSHNGPLMPVPLKYATPTRFDGPPRAVALGW 305
IVRAQSG PA+GEVLEPFA PH V GWMRGSH GPLMPV + ATPTRFDGP R +ALG+
Sbjct: 242 IVRAQSGFPAVGEVLEPFANPHFVPGWMRGSHWGPLMPVGEEDATPTRFDGPARIIALGF 301
Query: 306 QISPEGKLIGPVDLFDDPAFDWARQKALEITDYMRRHGPFEPHRLPLEEMEYTTLPGVLE 365
Q+ +G LIGP DLF D FD AR+KALE+ D +RR GPF+PHRLP MEYTT+P VLE
Sbjct: 302 QVC-DGMLIGPNDLFADKGFDKAREKALEMADIIRRMGPFQPHRLPATMMEYTTVPKVLE 360
Query: 366 KLKDRFEPIE 375
L+DRF P+E
Sbjct: 361 ALEDRFIPLE 370
>gb|AAK40625.1| Conserved hypothetical protein [Sulfolobus solfataricus]
Length = 382
Score = 464 bits (1181), Expect = e-130
Identities = 220/367 (59%), Positives = 279/367 (75%), Gaps = 6/367 (1%)
Query: 6 KITISVIKADVGGWPGHSRVHPALIEKAKEVLSEAQKEGTIIDFYVTYAGDDLQLIMTHK 65
K T+SVIKAD+G GH VHP I A ++L+EA++ I D+Y+TY GDDLQLIMTH
Sbjct: 2 KTTLSVIKADIGSLAGHHVVHPDTIAAANKILAEAKRNNIISDYYITYVGDDLQLIMTHN 61
Query: 66 KGVDSPEVHGLAWEAFKKATEVAKELALYGAGQDLLKDAFSGNVRGLGPSVAEMEITLRK 125
+G VH AW AFK+A ++AK+L LY AGQDLL D+FSGN+RG+GP +AE+E R
Sbjct: 62 RGELDTRVHETAWNAFKEAAKIAKDLGLYAAGQDLLSDSFSGNLRGMGPGIAEIEFEERP 121
Query: 126 SEPIVTFHLDKTEPGAFNLPIFRMFADPFNTAGLVIDPKMHMGFRFEIWDILEHKKVIMN 185
+EP+V F DKTEPGA+NLP++++FADPFNTAGLVIDP MH G++FE+ D+ E + +++N
Sbjct: 122 AEPVVIFMADKTEPGAYNLPLYKIFADPFNTAGLVIDPTMHEGYKFEVLDVYEGESIMLN 181
Query: 186 SPEEMYDILALIGAKGRYVIKRVYPKEGHPIPKDEPVAVVSTEKLYEVAGEYVGKDDPVA 245
+PEE YD+LALIG RY+++RVY K + +VVS E+L +AG+YVGKDDPV
Sbjct: 182 TPEESYDLLALIGTPSRYIVRRVYRK-----ADNLQASVVSVERLNLIAGKYVGKDDPVM 236
Query: 246 IVRAQSGLPALGEVLEPFAFPHLVSGWMRGSHNGPLMPVPLKYATPTRFDGPPRAVALGW 305
+VRAQ GLPALGE+LE F P+LV GWMRGSH GPLMPV K A TRFDGPPR ++LG+
Sbjct: 237 VVRAQHGLPALGEILEAFTVPYLVPGWMRGSHYGPLMPVSQKDARATRFDGPPRLISLGF 296
Query: 306 QISPEGKLIGPVDLFDDPAFDWARQKALEITDYMRRHGPFEPHRLPLEEMEYTTLPGVLE 365
I GKL+GP DLFDDPAFD R+ A+ I DY+R+HGPF PHRL +EMEYTTLP V+E
Sbjct: 297 NIK-NGKLVGPTDLFDDPAFDEVRRTAVIIADYIRKHGPFMPHRLEPQEMEYTTLPLVIE 355
Query: 366 KLKDRFE 372
KLK+RF+
Sbjct: 356 KLKNRFK 362
>pir||A70454 conserved hypothetical protein aq_1790 - Aquifex aeolicus
>gi|2984088|gb|AAC07627.1| (AE000756) hypothetical
protein [Aquifex aeolicus]
Length = 381
Score = 456 bits (1160), Expect = e-127
Identities = 219/370 (59%), Positives = 275/370 (74%), Gaps = 6/370 (1%)
Query: 6 KITISVIKADVGGWPGHSRVHPALIEKAKEVLSEAQKEGTIIDFYVTYAGDDLQLIMTHK 65
K+T+SVIKAD+GG+ GHS HP ++ +E + + ++G +ID + GDD+ ++MTH
Sbjct: 2 KVTLSVIKADIGGFVGHSSTHPDVVNAVREHVEKEVEKGNLIDCDILTCGDDIAIVMTHT 61
Query: 66 KGVDSPEVHGLAWEAFKKATEVAKELALYGAGQDLLKDAFSGNVRGLGPSVAEMEITLRK 125
GVD+ VH +AW+AF K TEVAK+L LYGAGQDLL D FSGNV+G+GP VAEME R
Sbjct: 62 HGVDAELVHKIAWDAFMKGTEVAKKLKLYGAGQDLLTDTFSGNVKGMGPGVAEMEFEERP 121
Query: 126 SEPIVTFHLDKTEPGAFNLPIFRMFADPFNTAGLVIDPKMHMGFRFEIWDILEHKKVIMN 185
SEP++ F DKT P A+NLP++ MFADP NTAGLVIDPKMH GF FE+ D+ K V +N
Sbjct: 122 SEPVIVFFADKTSPSAWNLPLYEMFADPMNTAGLVIDPKMHDGFTFEVLDVYTGKAVKLN 181
Query: 186 SPEEMYDILALIGAKGRYVIKRVYPKEGHPIPKDEPVAVVSTEKLYEVAGEYVGKDDPVA 245
+P E+YD+LALIG+ G+YV+K VY E A ST++L +AG+YVGKDDPV
Sbjct: 182 TPAEVYDLLALIGSVGKYVVKNVYRNY-----DGEIAATASTQRLSLIAGQYVGKDDPVL 236
Query: 246 IVRAQSGLPALGEVLEPFAFPHLVSGWMRGSHNGPLMPVPLKYATPTRFDGPPRAVALGW 305
IVRAQSG PA+GE+LEPFA P +V GWMRGSHNGPLMPV + A P+RFDGPPR + G+
Sbjct: 237 IVRAQSGFPAVGEILEPFARPWIVEGWMRGSHNGPLMPVSFEDARPSRFDGPPRVIGAGY 296
Query: 306 QISPEGKLIGPVDLFDDPAFDWARQKALEITDYMRRHGPFEPHRLPLEEMEYTTLPGVLE 365
Q++ GKLIGP D+F DPAFD ARQ A ++ D +RR G FEPHRLP EEMEYTTLP VL+
Sbjct: 297 QLA-NGKLIGPADMFKDPAFDKARQVAQDMADILRRQGIFEPHRLPAEEMEYTTLPKVLK 355
Query: 366 KLKDRFEPIE 375
KL++RF E
Sbjct: 356 KLENRFYDTE 365
>pir||S11602 hypothetical protein 1 (16S rRNA 5' region) - Thermoplasma
acidophilum
Length = 177
Score = 238 bits (601), Expect = 8e-62
Identities = 119/172 (69%), Positives = 140/172 (81%), Gaps = 1/172 (0%)
Query: 204 VIKRVYPKEGHPIPKDEPVAVVSTEKLYEVAGEYVGKDDPVAIVRAQSGLPALGEVLEPF 263
+IKRVY K+ + +E VAV+ST+KL +AG+YVGKDDP A+VR QSGLPA GE LE F
Sbjct: 1 MIKRVYTKKENKKLPEENVAVISTDKLSLIAGKYVGKDDPAAVVRIQSGLPAAGESLEAF 60
Query: 264 AFPHLVSGWMRGSHNGPLMPVPLKYATPTRFDGPPRAVALGWQISPEGKLIGPVDLFDDP 323
AFP+LVSGWMRGS NGPLMPV +K A TRFDGPPR VALG+ + GKL GPVD+FDDP
Sbjct: 61 AFPYLVSGWMRGSFNGPLMPVGMKDAKMTRFDGPPRVVALGY-VLKSGKLEGPVDMFDDP 119
Query: 324 AFDWARQKALEITDYMRRHGPFEPHRLPLEEMEYTTLPGVLEKLKDRFEPIE 375
AFD+AR+ A E+TD++RR GPFEPHRLP +EMEYTTLP V+EKLKDRF IE
Sbjct: 120 AFDYARRVAGEMTDHLRRMGPFEPHRLPDQEMEYTTLPVVMEKLKDRFVDIE 171
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.319 0.140 0.425
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 155056668
Number of Sequences: 2977
Number of extensions: 7240329
Number of successful extensions: 14523
Number of sequences better than 1.0e-10: 10
Number of HSP's better than 0.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 14486
Number of HSP's gapped (non-prelim): 10
length of query: 375
length of database: 189,106,746
effective HSP length: 53
effective length of query: 322
effective length of database: 157,386,935
effective search space: 50678593070
effective search space used: 50678593070
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 166 (69.1 bits)