BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB1538 (PAB1538) DE:MET-10+ RELATED PROTEIN.
(278 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||D75035 met-10+ related protein. PAB1538 - Pyrococcus abyssi... 561 e-159
pir||D71128 hypothetical protein PH0793 - Pyrococcus horikoshii ... 505 e-142
sp|Q58952|YF57_METJA HYPOTHETICAL PROTEIN MJ1557 >gi|2128934|pir... 209 3e-53
gi|11499555 conserved hypothetical protein [Archaeoglobus fulgid... 183 2e-45
pir||C69027 conserved hypothetical protein MTH1200 - Methanobact... 179 4e-44
gb|AAG20549.1| (AE005125) Vng2475c [Halobacterium sp. NRC-1] 151 1e-35
pir||F69117 conserved hypothetical protein MTH1873 - Methanobact... 140 2e-32
pir||D75117 hypothetical protein PAB0505 - Pyrococcus abyssi (st... 138 1e-31
emb|CAC12055.1| (AL445065) conserved hypothetical protein [Therm... 131 1e-29
gb|AAD48952.1|AF149414_1 (AF149414) contains similarity to Pfam ... 127 1e-28
gi|8923676 hypothetical protein FLJ20772 [Homo sapiens] >gi|7021... 127 1e-28
gb|AAF19556.1|AC005761_4 (AC005761) L952.4 [Leishmania major] >g... 125 4e-28
sp|Q58293|Y883_METJA HYPOTHETICAL PROTEIN MJ0883 >gi|2128555|pir... 124 1e-27
pir||B71015 hypothetical protein PH1416 - Pyrococcus horikoshii ... 124 1e-27
gb|AAG19508.1| (AE005042) Vng1117c [Halobacterium sp. NRC-1] 115 6e-25
gi|11498311 conserved hypothetical protein [Archaeoglobus fulgid... 104 1e-21
pir||A71232 hypothetical protein PH0115 - Pyrococcus horikoshii ... 101 1e-20
pir||A72674 hypothetical protein APE0815 - Aeropyrum pernix (str... 91 1e-17
pir||T20173 hypothetical protein C53A5.2 - Caenorhabditis elegan... 88 1e-16
pir||T47729 hypothetical protein F18O21.80 - Arabidopsis thalian... 87 2e-16
pir||F75198 hypothetical protein PAB2272 - Pyrococcus abyssi (st... 85 9e-16
emb|CAC11965.1| (AL445065) conserved hypothetical protein [Therm... 85 1e-15
pir||T22045 hypothetical protein F40F9.10 - Caenorhabditis elega... 84 2e-15
dbj|BAA92631.1| (AB037814) KIAA1393 protein [Homo sapiens] 83 4e-15
gb|AAF47727.1| (AE003477) CG12032 gene product [Drosophila melan... 83 4e-15
gb|AAK42582.1| Conserved hypothetical protein [Sulfolobus solfat... 81 1e-14
gi|6321861 Yhr070wp [Saccharomyces cerevisiae] >gi|731672|sp|P38... 76 6e-13
pir||JC4255 met-10+ protein - Neurospora crassa >gi|773387|gb|AA... 74 2e-12
>pir||D75035 met-10+ related protein. PAB1538 - Pyrococcus abyssi (strain Orsay)
>gi|5458690|emb|CAB50177.1| (AJ248287) MET-10+ RELATED
PROTEIN. [Pyrococcus abyssi]
Length = 278
Score = 561 bits (1431), Expect = e-159
Identities = 278/278 (100%), Positives = 278/278 (100%)
Query: 1 MRTQVIKPRIREILSRELPPDLLALLPKRWVKLGDILLLPLRPELEPYKYRIAEVYAKVL 60
MRTQVIKPRIREILSRELPPDLLALLPKRWVKLGDILLLPLRPELEPYKYRIAEVYAKVL
Sbjct: 1 MRTQVIKPRIREILSRELPPDLLALLPKRWVKLGDILLLPLRPELEPYKYRIAEVYAKVL 60
Query: 61 GVKTVLRKGHIYGETRKPDYEILYGNDTITVHVENGIKYKLDVAKIMFSPANVKERVRMA 120
GVKTVLRKGHIYGETRKPDYEILYGNDTITVHVENGIKYKLDVAKIMFSPANVKERVRMA
Sbjct: 61 GVKTVLRKGHIYGETRKPDYEILYGNDTITVHVENGIKYKLDVAKIMFSPANVKERVRMA 120
Query: 121 KVAKPNELVVDMFAGIGHLSLPIAVYGKARVIAIEKDPYTFKFLLENIQLNKVQDRMSAY 180
KVAKPNELVVDMFAGIGHLSLPIAVYGKARVIAIEKDPYTFKFLLENIQLNKVQDRMSAY
Sbjct: 121 KVAKPNELVVDMFAGIGHLSLPIAVYGKARVIAIEKDPYTFKFLLENIQLNKVQDRMSAY 180
Query: 181 NMDNRDFPGENIADRILMGYVVKTAEFIPKALSIAKDEAIIHYHNTVPEKLMPEEPFATF 240
NMDNRDFPGENIADRILMGYVVKTAEFIPKALSIAKDEAIIHYHNTVPEKLMPEEPFATF
Sbjct: 181 NMDNRDFPGENIADRILMGYVVKTAEFIPKALSIAKDEAIIHYHNTVPEKLMPEEPFATF 240
Query: 241 KKIAREHGYEAEKINELRIKRYAPGVWHVVVDIKVFKK 278
KKIAREHGYEAEKINELRIKRYAPGVWHVVVDIKVFKK
Sbjct: 241 KKIAREHGYEAEKINELRIKRYAPGVWHVVVDIKVFKK 278
>pir||D71128 hypothetical protein PH0793 - Pyrococcus horikoshii
>gi|3257203|dbj|BAA29886.1| (AP000003) 278aa long
hypothetical protein [Pyrococcus horikoshii]
Length = 278
Score = 505 bits (1287), Expect = e-142
Identities = 241/277 (87%), Positives = 267/277 (96%)
Query: 1 MRTQVIKPRIREILSRELPPDLLALLPKRWVKLGDILLLPLRPELEPYKYRIAEVYAKVL 60
MRTQ IKPRIREILS+ELP +L+ LLPKRWV++GD+LLLPLRPELEPYK+RIAEVYA+VL
Sbjct: 1 MRTQGIKPRIREILSKELPEELVKLLPKRWVRIGDVLLLPLRPELEPYKHRIAEVYAEVL 60
Query: 61 GVKTVLRKGHIYGETRKPDYEILYGNDTITVHVENGIKYKLDVAKIMFSPANVKERVRMA 120
GVKTVLRKGHI+GETRKPDYE+LYG+DT+TVHVENGIKYKLDVAKIMFSPANVKERVRMA
Sbjct: 61 GVKTVLRKGHIHGETRKPDYELLYGSDTVTVHVENGIKYKLDVAKIMFSPANVKERVRMA 120
Query: 121 KVAKPNELVVDMFAGIGHLSLPIAVYGKARVIAIEKDPYTFKFLLENIQLNKVQDRMSAY 180
KVAKP+ELVVDMFAGIGHLSLPIAVYGKA+VIAIEKDPYTFKFL+ENI LNKV+DRMSAY
Sbjct: 121 KVAKPDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAY 180
Query: 181 NMDNRDFPGENIADRILMGYVVKTAEFIPKALSIAKDEAIIHYHNTVPEKLMPEEPFATF 240
NMDNRDFPGENIADRILMGYVV+T EFIPKALSIAKD AIIHYHNTVPEKLMP EPF TF
Sbjct: 181 NMDNRDFPGENIADRILMGYVVRTHEFIPKALSIAKDGAIIHYHNTVPEKLMPREPFETF 240
Query: 241 KKIAREHGYEAEKINELRIKRYAPGVWHVVVDIKVFK 277
K+I +E+GY+ EK+NEL+IKRYAPGVWHVV+D++VFK
Sbjct: 241 KRITKEYGYDVEKLNELKIKRYAPGVWHVVLDLRVFK 277
>sp|Q58952|YF57_METJA HYPOTHETICAL PROTEIN MJ1557 >gi|2128934|pir||D64494 conserved
hypothetical protein MJ1557 - Methanococcus jannaschii
>gi|1500450|gb|AAB99577.1| (U67596) met-10+ related
protein [Methanococcus jannaschii]
Length = 249
Score = 209 bits (526), Expect = 3e-53
Identities = 109/247 (44%), Positives = 159/247 (64%), Gaps = 6/247 (2%)
Query: 29 RWVKLGDILLLPLRPELEPYKYRIAEVYAKVLGVKTVLRKGHIYGETRKPDYEILYGNDT 88
++ K+GD++++ + E + I E+ + +L I GE R P +ILYG +T
Sbjct: 4 KYQKIGDVVIV----KKELSEDEIREIVKRTKCKAILLYTTQITGEFRTPHVKILYGKET 59
Query: 89 ITVHVENGIKYKLDVAKIMFSPANVKERVRMAKVAKPNELVVDMFAGIGHLSLPIAVYGK 148
T+H E G +KLDVAKIM+S N++ER RMA ++ NE+VVDMFAGIG+ ++P+A Y K
Sbjct: 60 ETIHKEYGCLFKLDVAKIMWSQGNIEERKRMAFISNENEVVVDMFAGIGYFTIPLAKYSK 119
Query: 149 ARVI-AIEKDPYTFKFLLENIQLNKVQDRMSAYNMDNRDFPGENIADRILMGYVVKTAEF 207
+++ AIEK+P + +L ENI+LNK+ + + DNRD +++ADR++MGYV KT +F
Sbjct: 120 PKLVYAIEKNPTAYHYLCENIKLNKLNNVIPIL-ADNRDVELKDVADRVIMGYVHKTHKF 178
Query: 208 IPKALSIAKDEAIIHYHNTVPEKLMPEEPFATFKKIAREHGYEAEKINELRIKRYAPGVW 267
+ K KD +IHYH TV EK+M E P K A ++GY+ +IK+YAPGVW
Sbjct: 179 LDKTFEFLKDRGVIHYHETVAEKIMYERPIERLKFYAEKNGYKLIDYEVRKIKKYAPGVW 238
Query: 268 HVVVDIK 274
HVVVD K
Sbjct: 239 HVVVDAK 245
>gi|11499555 conserved hypothetical protein [Archaeoglobus fulgidus]
>gi|7450736|pir||D69496 conserved hypothetical protein
AF1973 - Archaeoglobus fulgidus
>gi|2648568|gb|AAB89282.1| (AE000967) conserved
hypothetical protein [Archaeoglobus fulgidus]
Length = 336
Score = 183 bits (459), Expect = 2e-45
Identities = 100/271 (36%), Positives = 165/271 (59%), Gaps = 7/271 (2%)
Query: 7 KPRIREILSRELPPDLLALLPKRWVKLGDILLLPLRPELEPYKYRIAEVYAKVLGVKTVL 66
K +REIL ++P +L+ P + +GDI+++ L Y I E ++ K V
Sbjct: 72 KRSLREILRGKVPEELI---PTNYKVIGDIVVVKLDERAREYAKVIGEALMQINPCKAVW 128
Query: 67 RKGHIYGETRKPDYEILYGNDTITVHVENGIKYKLDVAKIMFSPANVKERVRMAKVAKPN 126
YG RKP E++ G ++T H ENG ++++DVAK+MFS N ER+R+A++ +
Sbjct: 129 CDYGRYGMKRKPRMELIAGEGSVTEHRENGCRFRIDVAKVMFSLGNQAERMRIARLVEDG 188
Query: 127 ELVVDMFAGIGHLSLPIAVYGKA-RVIAIEKDPYTFKFLLENIQLNKVQDRMSAYNMDNR 185
E+VVDMFAGIG+ S+PIAV+ KA R+ +IE +P ++K LLENI+LN V + + D++
Sbjct: 189 EVVVDMFAGIGYFSIPIAVHSKARRIYSIEINPESYKLLLENIKLNDVGNIVPILG-DSQ 247
Query: 186 DFPGENIADRILMGYVVKTAEFIPKALSIAKDEAIIHYHNTVPEKLMPEEPFATFKKIAR 245
E +ADR++MG++ +++ A+ K+ ++HYH PE ++ + P +K R
Sbjct: 248 FVTPEGVADRVVMGHIY-CHDYLHTAIRALKERGVVHYHEATPEAVI-DRPVRRVEKACR 305
Query: 246 EHGYEAEKINELRIKRYAPGVWHVVVDIKVF 276
+ G + + ++K Y+PGV+HVVVD +V+
Sbjct: 306 KMGKKCRILGFKKVKNYSPGVYHVVVDAEVY 336
>pir||C69027 conserved hypothetical protein MTH1200 - Methanobacterium
thermoautotrophicum (strain Delta H)
>gi|2622309|gb|AAB85689.1| (AE000888) met-10+ related
protein [Methanobacterium thermoautotrophicum]
Length = 244
Score = 179 bits (449), Expect = 4e-44
Identities = 91/248 (36%), Positives = 151/248 (60%), Gaps = 10/248 (4%)
Query: 29 RWVKLGDILLLPLRPELEPYKYRIAEVYAKVLGVKTVLRKGHIYGETRKPDYEILYGNDT 88
+W ++GDI++L + +P E ++ GV++V+R I+G R+P +L G+ T
Sbjct: 5 KWARIGDIIVLNREAD-DP------EALLEMEGVRSVIRVEGIHGPLRRPRVRVLAGSGT 57
Query: 89 ITVHVENGIKYKLDVAKIMFSPANVKERVRMAKVAKPNELVVDMFAGIGHLSLPIAVYG- 147
TVH ENG +++D++++M+S N+ ER R+ + + E VVDMFAGIG+ S+P+AV+
Sbjct: 58 ETVHKENGCLFRIDLSRVMWSRGNINERARIPSLVEEGETVVDMFAGIGYFSIPVAVHSD 117
Query: 148 KARVIAIEKDPYTFKFLLENIQLNKVQDRMSAYNMDNRDFPGENIADRILMGYVVKTAEF 207
RV ++E +P +F+ L NI LN+V+ + D R+ E ADR++MGYV +T F
Sbjct: 118 PGRVYSVELNPDSFELLKSNITLNRVEGIIEPILGDCREVAPELDADRVIMGYVGRTHHF 177
Query: 208 IPKALSIAKDEAIIHYHNTVPEKLMPEEPFATFKKIAREHGYEAEKINELRIKRYAPGVW 267
+ A+ +D +IHYH T PE + P ++ A H +++ IK+Y+PGVW
Sbjct: 178 LDAAMECVRDGGVIHYHETAPEAIRFSRPLRRIERAA--HPRRVSLLDKRVIKKYSPGVW 235
Query: 268 HVVVDIKV 275
HVV+D+++
Sbjct: 236 HVVLDVRI 243
>gb|AAG20549.1| (AE005125) Vng2475c [Halobacterium sp. NRC-1]
Length = 346
Score = 151 bits (377), Expect = 1e-35
Identities = 99/267 (37%), Positives = 141/267 (52%), Gaps = 26/267 (9%)
Query: 27 PKRWVKLGDILLLPLRPELEPYKYRIAEVYAKVLGVK----TVLRKGH-IYGETRKPDYE 81
P W LG ++L P EV A +L + TVL +G + GE R PD
Sbjct: 87 PSSWAVLGSVILADFTDCPRP-----GEVGAALLELHREADTVLDRGDGVAGEHRTPDVS 141
Query: 82 ILYGN-DTITVHVENGIKYKLDVAKIMFSPANVKERVRMAKVAKPNELVVDMFAGIGHLS 140
++ G+ DT TVHVE+G +Y LD+A +MFSP N ER RM P E V+DMFAG+G+ +
Sbjct: 142 VVAGDGDTETVHVEHGTRYALDLAAVMFSPGNKAERARMGDATGPGERVLDMFAGVGYFA 201
Query: 141 LPIAVYGKARVIAIEKDPYTFKFLLENIQLNKVQDRMSAYNMDNRDFPGENIADRILMGY 200
LP+A G A V A+EK+P F+FL EN QLN V + + D R+ ADRI+MGY
Sbjct: 202 LPMARAG-ATVTAVEKNPTAFRFLAENAQLNDVAETLDTILGDCREVDAP--ADRIVMGY 258
Query: 201 -----------VVKTAEFIPKALSIAKDEAIIHYHNTVPEKLMPEEPFATFKKIAREHGY 249
T ++ AL ++H H+ VPE + E P + + + G
Sbjct: 259 YDALGGGPVGDAASTPGYLDAALDNLVSGGVLHAHSAVPEAELWERPLSRLRAGCQRAGR 318
Query: 250 EAEKI-NELRIKRYAPGVWHVVVDIKV 275
A + + R+K ++ GV+HVV+D +V
Sbjct: 319 PAPTVLDTRRVKSHSEGVFHVVIDARV 345
>pir||F69117 conserved hypothetical protein MTH1873 - Methanobacterium
thermoautotrophicum (strain Delta H)
>gi|2623010|gb|AAB86339.1| (AE000939) met-10+ protein
[Methanobacterium thermoautotrophicum]
Length = 352
Score = 140 bits (349), Expect = 2e-32
Identities = 84/274 (30%), Positives = 150/274 (54%), Gaps = 10/274 (3%)
Query: 9 RIREILSRELPPDLLALLPKRWVKLGDILLLPLRPELEPYKYRIAEVYAKVLGVKTV-LR 67
R +IL ++P D LA + + + +GD ++L + EL+ Y++ I E + G K V ++
Sbjct: 69 RFTDILKSKIPEDALASIRRSFDIIGDTVILEIPEELQDYRFIIGEAALEFTGRKAVYMK 128
Query: 68 KGHIYGETRKPDYEILYGND-TITVHVENGIKYKLDVAKIMFSPANVKERVRMAKVAKPN 126
+ + G TR + E++ G+ + T+H E G + K+D+ + FSP ER +A K
Sbjct: 129 RSGVKGVTRTRELELIAGSALSETIHQEYGSRIKVDIKDVYFSPRLANERETVAAQVKDG 188
Query: 127 ELVVDMFAGIGHLSLPIAVYGKA-RVIAIEKDPYTFKFLLENIQLNKVQDRMSAYNMDNR 185
E+V+DMFAG G ++ +A +G+A RV A++ +P +++ EN +LN +D + A D R
Sbjct: 189 EVVLDMFAGAGPFAIAVARHGRASRVYAVDINPAAVRYIEENARLNHAEDVIVAVEGDVR 248
Query: 186 DF--PGENIADRILMGYVVKTAEFIPKALSIAKDEAIIHYHNTVPEKLMPEEPFATFKKI 243
+F E AD I+M EF+ A+ +D +IHY+ + + P K+
Sbjct: 249 EFLRDRECFADHIIMNLPGSACEFLDDAIRALRDGGVIHYYEFARDF---KTPVNRLKEA 305
Query: 244 AREHGYEAEKINELRIKRYAPGVWHVVVDIKVFK 277
A+ + + ++ R+K +PGVWH+ +D ++ K
Sbjct: 306 AKP--FHVDVLDMRRVKSRSPGVWHMGIDARIRK 337
>pir||D75117 hypothetical protein PAB0505 - Pyrococcus abyssi (strain Orsay)
>gi|5458164|emb|CAB49653.1| (AJ248285) hypothetical
protein [Pyrococcus abyssi]
Length = 330
Score = 138 bits (343), Expect = 1e-31
Identities = 95/268 (35%), Positives = 148/268 (54%), Gaps = 9/268 (3%)
Query: 11 REILSRELPPDLLALLPKRWVKLGDILLLPLRPELEPYKYRIAEVYAKV-LGVKTVLRKG 69
REI++ +P +L LP + +G+I ++ + EL+ Y I +V VK V KG
Sbjct: 67 REIVN--VPQELRRFLPTSFDIIGNIAIIEIPEELKGYAKEIGRAIVEVHKNVKAVYMKG 124
Query: 70 H-IYGETRKPDYEILYG-NDTITVHVENGIKYKLDVAKIMFSPANVKERVRMAKVAKPNE 127
I GE R + + G N T T+H ENGI+ KLDVAK+ FSP ER+R+ K+A+ E
Sbjct: 125 SKIEGEYRTRELIHIAGENITETIHRENGIRLKLDVAKVYFSPRLATERMRVFKMAQEGE 184
Query: 128 LVVDMFAGIGHLSLPIAVYGKARVIAIEKDPYTFKFLLENIQLNKVQDRMSAYNMDNRDF 187
+V DMFAG+G S+ +A + V A + +P+ K+L ENI+LNKV + + D+R+
Sbjct: 185 VVFDMFAGVGPFSILLAKKAEL-VFACDINPWAIKYLEENIKLNKVNNVVPILG-DSREI 242
Query: 188 PGENIADRILMGYVVKTAEFIPKALSIAKDEAIIHYHNTVPEKLMPEEPFATFKKIAREH 247
E ADRI+M EF+ A+S D +IHY+ PE +++A +
Sbjct: 243 --EVKADRIIMNLPKYAHEFLEHAISCINDGGVIHYYGFGPEGDPYGWHLERIRELANKF 300
Query: 248 GYEAEKINELRIKRYAPGVWHVVVDIKV 275
G + E + + I+ YAP +++ +D +V
Sbjct: 301 GVKVEVLGKRVIRNYAPRQYNIAIDFRV 328
>emb|CAC12055.1| (AL445065) conserved hypothetical protein [Thermoplasma
acidophilum]
Length = 329
Score = 131 bits (326), Expect = 1e-29
Identities = 88/275 (32%), Positives = 141/275 (51%), Gaps = 10/275 (3%)
Query: 2 RTQVIKPRIREILSRELPPDLLALLPKRWVKLGDILLLPLRPELEPYKYRIAEVYAKVLG 61
R + IK ++++LS+E +P RWV+ G+ L L P + + +V + LG
Sbjct: 63 RQENIKEMMKDLLSKEY--GYHGNVPDRWVRYGNALFLN-----SPIEECVFKVMKRFLG 115
Query: 62 VKTVLRKGHIYGETRKPDYEILYGNDTITVHVENGIKYKLDVAKIMFSPANVKERVRMAK 121
+++V I G R P E LYG +H+ENGI++K D KIMFSP N ER RM
Sbjct: 116 IESVYVYHGIAGSERIPVVEFLYGRRGEVIHIENGIRFKFDPEKIMFSPGNTNERTRMRY 175
Query: 122 VAKPNELVVDMFAGIGHLSLPIAVYGK-ARVIAIEKDPYTFKFLLENIQLNKVQDRMSAY 180
+ E V+DMF+GIG+ +LP+A YG R+ A + +P +L EN +N V++ +
Sbjct: 176 MTFEGETVLDMFSGIGYFALPVAKYGNPMRIFACDINPDAIHYLKENAVINGVENIVVPI 235
Query: 181 NMDNRDFPGENIADRILMGYVVKTAEFIPKALSIAKDEAIIHYHNTVPEKLMPEEPFATF 240
D+R + D I+MG K+ F+P AL +K I H+ V ++ + + +
Sbjct: 236 LGDSRLSCPKGPFDSIIMGN-FKSLMFLPGALERSKKNTRIILHHLVSQEDLGSYKY-SI 293
Query: 241 KKIAREHGYEAEKINELRIKRYAPGVWHVVVDIKV 275
GY + +K YAP ++HV +++
Sbjct: 294 MSYTSSLGYLTAVEDSHIVKSYAPKMFHVSTTLRI 328
>gb|AAD48952.1|AF149414_1 (AF149414) contains similarity to Pfam family PF00145 (C-5
cytosine-specific DNA methylase); score=10.4. E=0.051,
N=1 [Arabidopsis thaliana] >gi|7267225|emb|CAB80832.1|
(AL161501) contains similarity to Pfam family PF00145
(C-5 cytosine-specific DNA methylase), score=10.4.
E=0.051, N=1, coded for by A. thaliana cDNA
T41604~strong similarity to~Contains Prokaryotic
membrane lipoprotein lipid attachment site AA40-50~con>
Length = 977
Score = 127 bits (317), Expect = 1e-28
Identities = 85/256 (33%), Positives = 132/256 (51%), Gaps = 11/256 (4%)
Query: 4 QVIKPRIREILSRE-LPPDLLALLPKRWVKLGDILLLPLRPELEPYKYRIAE----VYAK 58
Q ++ I IL ++ LP +LL LP++W +LGDI+++P +P I + +K
Sbjct: 710 QRMREDITSILKQKGLPEELLDELPQKWERLGDIVVVPATSFKDPTWSSINDEVWCAVSK 769
Query: 59 VLGVKTVLRKGHIYGE-TRKPDYEILYGNDTITVHVENGIKYKLDVAKIMFSPANVKERV 117
L + R+G + TR EIL G++ H ENGI Y D K MFS N+ E++
Sbjct: 770 SLSANRLARQGRVEPNGTRDSTLEILVGDNGWVNHRENGILYSFDATKCMFSWGNLSEKL 829
Query: 118 RMAKVAKPNELVVDMFAGIGHLSLPIAVYGKARVI-AIEKDPYTFKFLLENIQLNKVQDR 176
RM +A NE+VVD+FAGIG+ LP V KA+++ A E +P+ + L N++ N V +R
Sbjct: 830 RMGNMACENEVVVDLFAGIGYFVLPFLVRAKAKLVYACEWNPHAIEALRRNVEANSVSER 889
Query: 177 MSAYNMDNRDFPGENIADRILMGYVVKT-AEFIPKALSIAKDEAIIHYHNTV---PEKLM 232
DNR + +ADR+ +G + + ++ ++ + I+H H V E
Sbjct: 890 CIILEGDNRITAPKGVADRVNLGLIPSSEGSWVTAIQALRPEGGILHVHGNVKDSDESSW 949
Query: 233 PEEPFATFKKIAREHG 248
E T IAR G
Sbjct: 950 GEHVTKTLSDIARAEG 965
>gi|8923676 hypothetical protein FLJ20772 [Homo sapiens]
>gi|7021077|dbj|BAA91374.1| (AK000779) unnamed protein
product [Homo sapiens]
Length = 448
Score = 127 bits (316), Expect = 1e-28
Identities = 83/249 (33%), Positives = 131/249 (52%), Gaps = 22/249 (8%)
Query: 21 DLLALLPKRWVKLGDILLLP-----------LRPELEPYKYRIAEVYAKVLGVKTVLRKG 69
+L A LP+ W + G++LLL L PEL E A LGV+ + ++G
Sbjct: 125 ELEADLPRSWQRHGNLLLLSEDCFQAKQWKNLGPELW-------ETVALALGVQRLAKRG 177
Query: 70 HIYGE-TRKPDYEILYGNDTITVHVENGIKYKLDVAKIMFSPANVKERVRMAKVAKPNEL 128
+ + TR P +L G+ HV+NGI+YK DV + MFS N+ E++R+A ++ E+
Sbjct: 178 RVSPDGTRTPAVTLLLGDHGWVEHVDNGIRYKFDVTQCMFSFGNITEKLRVASLSCAGEV 237
Query: 129 VVDMFAGIGHLSLPIAVY-GKARVIAIEKDPYTFKFLLENIQLNKVQDRMSAYNMDNRDF 187
+VD++AGIG+ +LP V+ G A V A E +P+ L N+++N V DR + DNR
Sbjct: 238 LVDLYAGIGYFTLPFLVHAGAAFVHACEWNPHAVVALRNNLEINGVADRCQIHFGDNRKL 297
Query: 188 PGENIADRILMGYVVKTAEFIPKALSIAKDEA--IIHYHNTVPEKLMPEEPFATFKKIAR 245
NIADR+++G + + E P A + + +A I+H H V K+ +
Sbjct: 298 KLSNIADRVILGLIPSSEEGWPIACQVLRQDAGGILHIHQNVESSPGKNLQALGVSKVEK 357
Query: 246 EHGYEAEKI 254
EH ++I
Sbjct: 358 EHWLYPQQI 366
>gb|AAF19556.1|AC005761_4 (AC005761) L952.4 [Leishmania major]
>gi|6759105|gb|AAF27942.1|AC005767_3 (AC005767) L952.4
[Leishmania major] >gi|6778464|gb|AAF28368.1|AC005766_2
(AC005766) L952.4 [Leishmania major]
Length = 390
Score = 125 bits (312), Expect = 4e-28
Identities = 93/311 (29%), Positives = 139/311 (43%), Gaps = 63/311 (20%)
Query: 25 LLPKRWVKLGDILLLPLRP-----ELEPYKYRIAEVYAKVLGVKTVLRKGHIYGETRKPD 79
L P+++ G ++++ L EL P AE +A VL +L I GE R+P
Sbjct: 78 LFPRKFEVHGHVVVIRLNDGTSVEELRPLARFFAESFAPVLVDVVLLDVDGIVGELRRPS 137
Query: 80 YEILYGNDT----------------------------------------------ITVHV 93
+IL+ DT T HV
Sbjct: 138 LQILFQADTALTEYATSLRRTVQRRWGGARKRGQPSCMTSDAVESTLNRWTASPTFTAHV 197
Query: 94 ENGIKYKLDVAKIMFSPANVKERVRMAKVAKPNELVVDMFAGIGHLSLPIAVYGK-ARVI 152
ENG+ Y DV+++MFS N ER+ V +E+VVDMF GIG+ +LP+A++G A +
Sbjct: 198 ENGVIYSFDVSRVMFSSGNTTERIHFGTVTAADEVVVDMFCGIGYFTLPLAMHGNVAAIH 257
Query: 153 AIEKDPYTFKFLLENIQLNKVQDRMSAYNMDNRDFPGENI---ADRILMGYVVKTAEFIP 209
A+EK+P + F+ N LNKV + DNR+ GE + DR+LMGY+ F+P
Sbjct: 258 ALEKNPDSIDFVKLNAVLNKVDHLIHPVCGDNREV-GEELLGKCDRVLMGYIPTCKSFLP 316
Query: 210 KALSIAK------DEAIIHYHNTVPEKLMPEEPFATFKKIAREHGYEAEKINELR-IKRY 262
+A S K ++HYH + +E + E +I +LR +K Y
Sbjct: 317 RAASFLKRNEAGRSSGVVHYHFLADKLCAAQEALRDVQDELGEEVAAFVRIADLRCVKSY 376
Query: 263 APGVWHVVVDI 273
AP +H V D+
Sbjct: 377 APKRFHFVADL 387
>sp|Q58293|Y883_METJA HYPOTHETICAL PROTEIN MJ0883 >gi|2128555|pir||C64410 hypothetical
protein MJ0883 - Methanococcus jannaschii
>gi|1499713|gb|AAB98887.1| (U67532) conserved
hypothetical protein [Methanococcus jannaschii]
Length = 336
Score = 124 bits (309), Expect = 1e-27
Identities = 88/276 (31%), Positives = 152/276 (54%), Gaps = 16/276 (5%)
Query: 7 KPRIREILSRELPPDL-LALLPKRWVKLGDILLLPLRPEL-EPYKYRIAEVYAKVLGVKT 64
KP REI+S++ ++ L+ + +GD+++L + E+ E + I E+ K++ K
Sbjct: 73 KPSFREIISKKYRKEIDEGLISLSYDVVGDLVILQISDEVDEKIRKEIGELAYKLIPCKG 132
Query: 65 VLR-KGHIYGETRKPDYEILYG-NDTITVHVENGIKYKLDVAKIMFSPANVKERVRMAKV 122
V R K + GE R + E L G N T+T+H ENG + +D+AK+ FSP ER R+ K
Sbjct: 133 VFRRKSEVKGEFRVRELEHLAGENRTLTIHKENGYRLWVDIAKVYFSPRLGGERARIMKK 192
Query: 123 AKPNELVVDMFAGIGHLSLPIAVYGKARVIAIEKDPYTFKFLLENIQLNKVQDRMSAYNM 182
N++VVDMFAG+G S IA ++ AI+ +P+ + L +NI+LNK++ ++
Sbjct: 193 VSLNDVVVDMFAGVGPFS--IACKNAKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILS 250
Query: 183 DNRDFPGENIADRILMGYVVKTAEFIPKALSIAKDEAIIHYHNTVPEKLMPEEPFATFKK 242
D R+ + +R++M +FI KAL I ++ +IHY+ T+ + ++ F+K
Sbjct: 251 DVREVDVK--GNRVIMNLPKFAHKFIDKALDIVEEGGVIHYY-TIGKDF--DKAIKLFEK 305
Query: 243 IAREHGYEAEKINELRIKRYAPGVWHVVVDIKVFKK 278
+ E + + +K YAP + + +D K+ KK
Sbjct: 306 KC-----DCEVLEKRIVKSYAPREYILALDFKINKK 336
>pir||B71015 hypothetical protein PH1416 - Pyrococcus horikoshii
>gi|3257839|dbj|BAA30522.1| (AP000006) 330aa long
hypothetical protein [Pyrococcus horikoshii]
Length = 330
Score = 124 bits (309), Expect = 1e-27
Identities = 86/262 (32%), Positives = 139/262 (52%), Gaps = 9/262 (3%)
Query: 18 LPPDLLALLPKRWVKLGDILLLPLRPELEPYKYRIAEVYAKV-LGVKTVLRKG-HIYGET 75
+P +L LP + +G+I ++ + EL+ Y I +V VK V KG + GE
Sbjct: 72 IPRELRKFLPSSFDIIGNIAIIEIPSELQNYSNEIGGAIIRVHKSVKAVYMKGGSVEGEY 131
Query: 76 RKPDYEILYGND-TITVHVENGIKYKLDVAKIMFSPANVKERVRMAKVAKPNELVVDMFA 134
R + + G T T+H ENG++ KLD+ K+ FSP ER+R+ K+A+ E+V DMFA
Sbjct: 132 RVRNLIHIAGEKITETIHRENGVRLKLDITKVYFSPRLATERMRVFKMAREGEIVFDMFA 191
Query: 135 GIGHLSLPIAVYGKAR-VIAIEKDPYTFKFLLENIQLNKVQDRMSAYNMDNRDFPGENIA 193
G+G S+ +A KAR V A + +P+ K+L ENI+LNKV++ + + + A
Sbjct: 192 GVGPFSILLA--KKARMVFACDINPWAIKYLEENIKLNKVKNIIPILSDVTKVCVK---A 246
Query: 194 DRILMGYVVKTAEFIPKALSIAKDEAIIHYHNTVPEKLMPEEPFATFKKIAREHGYEAEK 253
DRI+M + F+ A+ + IIHY+ PEK ++A G + E
Sbjct: 247 DRIIMNLPKYASRFLEHAMRCVNNGGIIHYYGFGPEKDPYGWHVKRINEVAGRLGVKVEI 306
Query: 254 INELRIKRYAPGVWHVVVDIKV 275
+ + I+ YAP +++ +D +V
Sbjct: 307 LGKRIIRNYAPRQYNIAIDFRV 328
>gb|AAG19508.1| (AE005042) Vng1117c [Halobacterium sp. NRC-1]
Length = 327
Score = 115 bits (285), Expect = 6e-25
Identities = 80/262 (30%), Positives = 132/262 (49%), Gaps = 5/262 (1%)
Query: 19 PPDLLALLPKRWVKLGDILLLPLRPELEPYKYRIAEVYAKVLGVKTVLRKGHIYGETRKP 78
P D+L P + +LGDI+++ + A V + + + R I GE R
Sbjct: 69 PADILGFDPS-YARLGDIVIVDEDDSDRAHAIADAVVESDIPVEAVLNRASKIKGEQRVR 127
Query: 79 DYEILYGNDTITVHVENGIKYKLDVAKIMFSPANVKERVRMAKVAKPNELVVDMFAGIGH 138
+++++ G+ T TVH E G + LDVA + FSP ER R+ + E V DMFAG+G
Sbjct: 128 EWDVIAGDSTETVHREYGHAFALDVAAVYFSPRLATERHRVVEQVTAGEHVFDMFAGVGP 187
Query: 139 LSLPIAVYGKARVIAIEKDPYTFKFLLENIQLNKVQDRMSAYNMDNRDFPGE--NIADRI 196
++P+A G ARV+A + + +L N N V DR++ D R+ GE ADRI
Sbjct: 188 YAVPMASAG-ARVVATDVNETAIDYLQANAARNGVADRVTGVAGDVREVAGEYTGWADRI 246
Query: 197 LMGYVVKTAEFIPKALSIAKDEAIIHYHNTVPEKLMPEEPFATFKKIAREHGYEAEKINE 256
+M EF+ A+++A DE +H+++ E + A + AR Y+
Sbjct: 247 VMNLPHTADEFLETAVALAGDECTLHFYDIQHEDGRFDAGEAAIRAAARP-AYDVTVATR 305
Query: 257 LRIKRYAPGVWHVVVDIKVFKK 278
++ YAP ++VV+D+ + ++
Sbjct: 306 HTVRSYAPHEFNVVLDVSLSRR 327
>gi|11498311 conserved hypothetical protein [Archaeoglobus fulgidus]
>gi|7450738|pir||H69337 conserved hypothetical protein
AF0704 - Archaeoglobus fulgidus
>gi|2649912|gb|AAB90537.1| (AE001056) conserved
hypothetical protein [Archaeoglobus fulgidus]
Length = 273
Score = 104 bits (257), Expect = 1e-21
Identities = 78/274 (28%), Positives = 136/274 (49%), Gaps = 12/274 (4%)
Query: 10 IREILSRELPPDLLALLPKRWVKLGDILLLPLRPELEPYKYRIAEVYAKV-LGVKTVLRK 68
++E+L L + L L+ + + +GD++++ + E+ + I E K VKTVLRK
Sbjct: 3 LKELLKDRLSEEELKLVRRSFEIIGDVVIIEIPDEIMHHSRDIVEAILKRHKHVKTVLRK 62
Query: 69 -GHIYGETRKPDYEILYGNDTITVHVENGIKYKLDVAKIMFSPANVKERVRMAKVAKPNE 127
G + G R YE +YG T TV E+G ++ +D K +S ER R+A++ E
Sbjct: 63 VGEVDGVYRVARYEPIYGEKTETVVREHGCRFLVDPTKAYYSVKLSGERERIARLVGEGE 122
Query: 128 LVVDMFAGIGHLSLPIAVYGKAR-VIAIEKDPYTFKFLLENIQLNKVQDRMSAYNMDNRD 186
V+ MFAG+G + IA + R V+ +E +P+ ++ +N++LNKV+ + D +
Sbjct: 123 RVLVMFAGVGPYPIVIAKLARPREVVGVELNPHAVEYFRQNVRLNKVEGVVKVIEGDVEE 182
Query: 187 FPGE--NIADRILMGYVVKTAEFIPKALSIAKDEAIIHYH---NTVPEKLMPEEPFATFK 241
+ DR++M FI + +HY+ + EK++PE+ F+
Sbjct: 183 VVPQLSGQFDRVVMPAPYSAENFIHLLRGKVRRGGFVHYYTFDSQNEEKILPEKVRRKFE 242
Query: 242 KIAREHGYEAEKINELRIKRYAPGVWHVVVDIKV 275
+ G E E + R +AP V V+D++V
Sbjct: 243 ----DEGLEVEVVKMRRCGNFAPYVNRYVLDLRV 272
>pir||A71232 hypothetical protein PH0115 - Pyrococcus horikoshii
>gi|3256501|dbj|BAA29184.1| (AP000001) 296aa long
hypothetical protein [Pyrococcus horikoshii]
Length = 296
Score = 101 bits (248), Expect = 1e-20
Identities = 79/272 (29%), Positives = 143/272 (52%), Gaps = 17/272 (6%)
Query: 16 RELPPDLLALLPKRWVK-------LGDILLLPLRPELEPYKYRIAEVYAKVLG-VKTVLR 67
R++ +L LLPK V+ +GDI ++ + EL P K I E K+ +K + R
Sbjct: 29 RQIYRNLEDLLPKDVVEKVGRLDIVGDIAIISIPDELMPRKGVIVEAIRKLYPKIKVIAR 88
Query: 68 KGHIYGETRKPDYEILYGNDTI-TVHVENGIKYKLDVAKIMFSPANVKERVRMAKVAKPN 126
+G G R E+++G + + T+H ENG+ K+D++K+ F+P ER R+A++ K
Sbjct: 89 RGFHTGVYRVRRLEVIWGENRLQTIHKENGVLLKIDLSKVFFNPRMKGERYRLAQLIKDG 148
Query: 127 ELVVDMFAGIGHLSLPIAVYGKARVIAIEKDPYTFKFLLENIQLN--KVQDRMSAYNMDN 184
E ++ FAG+ +L IA + K ++A+E + K EN+ LN K++ ++S + D
Sbjct: 149 ERILIPFAGVLPYALVIARFRKVDIVAVELNDEAVKLAQENVLLNKDKLKGKISIIHGDV 208
Query: 185 RD-FPGENIADRILMGYVVKTAEFIPKALSIAKDEAIIHYHNTVPEKLMPEEPFATFKKI 243
D P DR++ K + + AL+++K + +HY++ + E + E K+
Sbjct: 209 FDVLPKLPSFDRVI-SPTPKGVDAL--ALTLSKAKRFLHYYDFIHEDKLGEFKEKIIKE- 264
Query: 244 AREHGYEAEKINELRIKRYAPGVWHVVVDIKV 275
++ G E K+ ++ Y P V+ V DI++
Sbjct: 265 CQKQGKEC-KVKVRKVADYKPHVYKVCADIEI 295
>pir||A72674 hypothetical protein APE0815 - Aeropyrum pernix (strain K1)
>gi|5104478|dbj|BAA79793.1| (AP000060) 341aa long
hypothetical protein [Aeropyrum pernix]
Length = 341
Score = 91.3 bits (223), Expect = 1e-17
Identities = 76/280 (27%), Positives = 140/280 (49%), Gaps = 14/280 (5%)
Query: 10 IREILSRELPPDLLALLPKRWVKLGDILLL--PLRP--ELEPYKYRIAEVYAKVLGVKTV 65
++EI L D ALL KR +GDI ++ P+ +E + E+ ++ V++V
Sbjct: 58 LKEIAEEVLGRDKAALLWKRIDIIGDIAVIKKPIHGGVSIEDLRLVAGELLRRLPHVRSV 117
Query: 66 -LRKGHIYG--ETRKPDYEILYGNDTITVHVENGIKYKLDVAKIMFSPANVKERVRMAKV 122
L G + G + R+ + T TV+ E+G ++ +D++K+ +P E +R+A++
Sbjct: 118 WLATGPVGGLFKVRRDLLHLAGEKRTSTVYREHGAEFLVDISKVFITPRLSFEHLRVARL 177
Query: 123 AKPNELVVDMFAGIGHLSLPIAVYGK-ARVIAIEKDPYTFKFLLENIQLNKVQDRMSAYN 181
KP E VV+MFAG+G S+ IA+ + ++V +I+ +P ++ ++ENI+LN+V+D +
Sbjct: 178 VKPGETVVNMFAGVGVFSIIIALKSRPSKVYSIDINPDAYRLMIENIRLNRVEDVVEPML 237
Query: 182 MDNRDFPGEN---IADRILMGYVVKTAEFIPKALSIAKDEAIIHYHNTVPEKLMPEEPFA 238
D+ E+ +ADR+LM ++I AL + +H + V +
Sbjct: 238 GDSARIVSESLRGVADRVLMPLPDLALDYIGHALDALRGRGWLHVYLHVDYERGKGHLRR 297
Query: 239 TFKKIARE---HGYEAEKINELRIKRYAPGVWHVVVDIKV 275
K + E G+ + ++ P + VVVD V
Sbjct: 298 ACKLVEAEVERRGWRVVEAKARVVRSVGPKLLQVVVDAVV 337
>pir||T20173 hypothetical protein C53A5.2 - Caenorhabditis elegans
>gi|3875209|emb|CAB03994.1| (Z81486) Similarity to
Neurospora met-10+ protein (TR:Q01392)~cDNA EST
EMBL:T00910 comes from this gene [Caenorhabditis
elegans] >gi|3878789|emb|CAB01437.1| (Z78015) Similarity
to Neurospora met-10+ protein (TR:Q01392)~cDNA EST
EMBL:T00910 comes from this gene [Caenorhabditis
elegans]
Length = 1150
Score = 88.2 bits (215), Expect = 1e-16
Identities = 65/194 (33%), Positives = 104/194 (53%), Gaps = 10/194 (5%)
Query: 30 WVKLGDILLLPLRPELEPYKYRIAEVYA-KVLGVKTVLRKGHIYGET-RKPDYEILYGND 87
+ + G I+ E+ P+++ IAEV KV KTV++KG+I R D E+L G D
Sbjct: 572 YTQTGHIIHCNFADEILPFRFIIAEVLLDKVNNCKTVVQKGNIITNVYRNLDLELLAGED 631
Query: 88 TITVHV-ENGIKYKLDVAKIMFSPANVKERVRMAKVAKPNELVVDMFAGIGHLSLPIAVY 146
V E G+++K+D +K+ ++ E R++ + LV D GIG LP +
Sbjct: 632 NYVTEVKETGLRFKMDFSKVYWNSRLSHEHERVSGMFNTQSLVYDACCGIGPFVLPATLK 691
Query: 147 GK-ARVIAIEKDPYTFKFLLENIQLNKV-QDRMSAYNMDNRDFPGENIADRI--LMGYVV 202
K RV+A + +P + K+L N+ LNK+ ++R+ +NMD + F EN+AD + LM
Sbjct: 692 RKPKRVVANDLNPESVKWLKVNVGLNKIKEERIEIHNMDAKMFIKENVADDVVRLMLEES 751
Query: 203 KTAEF---IPKALS 213
EF +PK +S
Sbjct: 752 TAGEFENEVPKPMS 765
>pir||T47729 hypothetical protein F18O21.80 - Arabidopsis thaliana
>gi|7572910|emb|CAB87411.1| (AL163763) putative protein
[Arabidopsis thaliana]
Length = 447
Score = 87.4 bits (213), Expect = 2e-16
Identities = 63/183 (34%), Positives = 99/183 (53%), Gaps = 6/183 (3%)
Query: 9 RIREILSRELPPDLLALLPKRWVKLGDILLLPLRPELEPYKYRIAEV-YAKVLG-VKTVL 66
+++++ E+ P + L W G I L L EL P+K IA+V Y K +KT++
Sbjct: 76 QLKKLSELEVVPHSVTLGYSYW-SAGHIAHLNLHDELLPFKDVIAKVIYDKNYPRIKTIV 134
Query: 67 RK-GHIYGETRKPDYEILYGNDTITVHVEN-GIKYKLDVAKIMFSPANVKERVRMAKVAK 124
K G I E R P +E+L G + + V+ G ++KLD + ++ E +R++ + K
Sbjct: 135 NKVGTISNEFRVPKFEVLAGENGMETEVKQYGARFKLDYGLVYWNSRLEHEHMRLSSLFK 194
Query: 125 PNELVVDMFAGIGHLSLPIAVYGKARVIAIEKDPYTFKFLLENIQLNKVQDRMSAYNMDN 184
P E V DMFAGIG ++P A G V A + +P + ++L N + NKV D + +NMD
Sbjct: 195 PGETVCDMFAGIGPFAIPAAQKG-CFVYANDLNPDSVRYLKINAKFNKVDDLICVHNMDA 253
Query: 185 RDF 187
R F
Sbjct: 254 RKF 256
>pir||F75198 hypothetical protein PAB2272 - Pyrococcus abyssi (strain Orsay)
>gi|5457546|emb|CAB49037.1| (AJ248283) hypothetical
protein [Pyrococcus abyssi]
Length = 333
Score = 85.0 bits (207), Expect = 9e-16
Identities = 70/273 (25%), Positives = 137/273 (49%), Gaps = 19/273 (6%)
Query: 16 RELPPDLLALLPKRWVK-------LGDILLLPLRPELEPYKYRIAEVYAKVLG-VKTVLR 67
R++ +L LLP+ K +GDI ++ + E+ + I K+ VK + R
Sbjct: 65 RQIYKNLEDLLPREIFKKLGRLDIVGDIAIVSIPDEILSEREVIVSAIRKLYPKVKVIAR 124
Query: 68 KGHIYGETRKPDYEILYGNDTI-TVHVENGIKYKLDVAKIMFSPANVKERVRMAKVAKPN 126
+G G R + E+++G + + T+H ENG+ K+D++K+ F+P ER R+A++
Sbjct: 125 RGFHSGLYRIRELEVIWGENRLHTIHKENGVLIKVDLSKVFFNPRMKGERYRIAQLVNDG 184
Query: 127 ELVVDMFAGIGHLSLPIAVYGKARVIAIEKDPYTFKFLLENIQLN--KVQDRMSAYNMDN 184
E ++ FAG+ L IA + V A+E + + K EN++LN +++ ++ + D
Sbjct: 185 ERILVPFAGVIPYPLVIARFKNVEVYAVEINEFAVKLAEENLELNRDRLKGKIKIIHGDV 244
Query: 185 RD-FPGENIADRILMGYVVKTAEFIPK-ALSIAKDEAIIHYHNTVPEKLMPEEPFATFKK 242
+ P DR+ V T + + +L+++K E +HY++ V E + ++
Sbjct: 245 FEVLPNLPNFDRV----VSPTPKGVDALSLTLSKAEKFLHYYDFVHESEIERFRERVLEE 300
Query: 243 IAREHGYEAEKINELRIKRYAPGVWHVVVDIKV 275
R G E +++ ++ Y P V+ V D+++
Sbjct: 301 -CRRQGKEC-RVSVRKVSDYKPHVYKVCADVEI 331
>emb|CAC11965.1| (AL445065) conserved hypothetical protein [Thermoplasma
acidophilum]
Length = 306
Score = 84.7 bits (206), Expect = 1e-15
Identities = 47/141 (33%), Positives = 79/141 (55%), Gaps = 3/141 (2%)
Query: 86 NDTITVHVENGIKYKLDVAKIMFSPANVKERVRMAKVAKPNELVVDMFAGIGHLSLPIAV 145
N+T+T + ENG + +DVAK FSP ER R+ E + DMFAG+G +S+ IA
Sbjct: 122 NNTVTEYRENGCSFTVDVAKAYFSPRLATERRRIVDQVSDGEFIFDMFAGVGPISIEIAR 181
Query: 146 YGKARVIAIEKDPYTFKFLLENIQLNKVQDRMSAYNMDNRDFPGENI--ADRILMGYVVK 203
Y + R+IA + + + L EN++ N ++ + + D R E + ADR++M +
Sbjct: 182 YRRVRIIAADINCDAVEMLKENMEKNPLRGIIEPFCEDAR-IAAERVTGADRVIMNHPTA 240
Query: 204 TAEFIPKALSIAKDEAIIHYH 224
+ EFI A+ ++ +I+Y+
Sbjct: 241 SFEFIDYAVKTLREGGVINYY 261
>pir||T22045 hypothetical protein F40F9.10 - Caenorhabditis elegans
>gi|3876961|emb|CAA94765.1| (Z70753) Weak similarity
with yeast proline utilization transactivator (Swiss
Prot accession number P25502) [Caenorhabditis elegans]
Length = 502
Score = 84.3 bits (205), Expect = 2e-15
Identities = 63/230 (27%), Positives = 114/230 (49%), Gaps = 9/230 (3%)
Query: 26 LPKRWVKLGDILLLPLRPELE-PYKYRIAEVYAKVLGVKTVLRKGH--IYGETRKPDYEI 82
LPK+W K GD+++ P ++Y E++A V V R G + E R P ++
Sbjct: 89 LPKKWEKHGDMIVFPQNTFTHINWRYIGRELWAVVAQSLNVARVGRKRLIDEERTPHVDL 148
Query: 83 LYGNDTITVHV-ENGIKYKLDVAKIMFSPANVKERVRMAKVAKPNELVVDMFAGIGHLSL 141
L G D +V E GIK+ D K +F + E R++K + + +VDM+A +G+ +L
Sbjct: 149 LLGADAWVDYVDERGIKFCYDATKRVFENSKKAEMKRISKWSCQGQTIVDMYASLGYYTL 208
Query: 142 PIAVYGKAR-VIAIEKDPYTFKFLLENIQLNKVQDRMSAYNMDNRDFPGENIADRILMGY 200
V +A+ V+AI+ + + L+ + Q+N V DR+ + D R + ADR+ +G
Sbjct: 209 TFLVSCEAKQVVAIDWNDEILESLIRSAQVNNVDDRLLVIHGDCRRVCPDQTADRVYLGL 268
Query: 201 VVK-TAEFIPKALSIAKDEAIIHYH---NTVPEKLMPEEPFATFKKIARE 246
+ A ++ ++ + I+H + + +K P++ KK+ E
Sbjct: 269 LPSCRAHWLAACKALKPEGGIVHINEILDMTEKKKTPQKTEKVEKKVVAE 318
>dbj|BAA92631.1| (AB037814) KIAA1393 protein [Homo sapiens]
Length = 500
Score = 82.7 bits (201), Expect = 4e-15
Identities = 50/159 (31%), Positives = 87/159 (54%), Gaps = 4/159 (2%)
Query: 32 KLGDILLLPLRPELEPYKYRIAEVYA-KVLGVKTVLRK-GHIYGETRKPDYEILYGNDTI 89
++G I L LR P+K+ I +V K G+ + + K +I R E+L G +
Sbjct: 193 RIGHIAHLNLRDHQLPFKHLIGQVMIDKNPGITSAVNKINNIDNMYRNFQMEVLSGEQNM 252
Query: 90 TVHV-ENGIKYKLDVAKIMFSPANVKERVRMAKVAKPNELVVDMFAGIGHLSLPIAVYGK 148
V EN Y+ D +K+ ++P E R+ ++ KP +++ D+FAG+G ++P+A
Sbjct: 253 MTKVRENNYTYEFDFSKVYWNPRLSTEHSRITELLKPGDVLFDVFAGVGPFAIPVA-KKN 311
Query: 149 ARVIAIEKDPYTFKFLLENIQLNKVQDRMSAYNMDNRDF 187
V A + +P + K+LL N +LNKV ++ +N+D +DF
Sbjct: 312 CTVFANDLNPESHKWLLYNCKLNKVDQKVKVFNLDGKDF 350
>gb|AAF47727.1| (AE003477) CG12032 gene product [Drosophila melanogaster]
Length = 537
Score = 82.7 bits (201), Expect = 4e-15
Identities = 58/189 (30%), Positives = 97/189 (50%), Gaps = 6/189 (3%)
Query: 12 EILSRELPPDLLALLPKRWVKLGDILLLPLRPELEPYKYRIAEVYA-KVLGVKTVLRKGH 70
EIL LP + L + ++G I L LR L PYK I +V K+ +TV+ K
Sbjct: 112 EILKSVLPTEEEGLTS--YSRIGHIAHLNLRDHLLPYKQLIGQVLRDKLPNCRTVVNKAS 169
Query: 71 IYGET-RKPDYEILYGNDTITVHV-ENGIKYKLDVAKIMFSPANVKERVRMAKVAKPNEL 128
T R E++ G+ V ENG+ ++ D +K+ ++P E R+ K+ K +++
Sbjct: 170 SIDNTYRNFQLELICGDPDYQVETKENGVPFEFDFSKVYWNPRLSTEHERIVKMLKSDDV 229
Query: 129 VVDMFAGIGHLSLPIAVYGKARVIAIEKDPYTFKFLLENIQLNKVQDRMSAYNMDNRDFP 188
+ D+FAG+G S+P A + V+A + +P +F++L N + NK + N D R F
Sbjct: 230 LYDVFAGVGPFSIP-AAKKRCHVLANDLNPESFRWLQHNAKRNKCLPNIKMSNKDGRQFI 288
Query: 189 GENIADRIL 197
E + + +L
Sbjct: 289 VEELREDLL 297
>gb|AAK42582.1| Conserved hypothetical protein [Sulfolobus solfataricus]
Length = 262
Score = 81.1 bits (197), Expect = 1e-14
Identities = 73/252 (28%), Positives = 121/252 (47%), Gaps = 12/252 (4%)
Query: 28 KRWVKLGDILLL--PLRPELEPYKYRIAEVYAKVLGVKTVL-RKGHIYGETRKPDYEILY 84
KR +GDI+++ P + E E+ + VK+V R + G R Y L
Sbjct: 16 KRIEIVGDIVIIGVPFNKKPEDLVEIANEILSTFPYVKSVWGRHRDVNGTYRLSTYVHLA 75
Query: 85 GND-TITVHVENGIKYKLDVAKIMFSPANVKERVRMAKVAKPNELVVDMFAGIGHLSLPI 143
G + TV+ E+ KY LD K+ FS E +R+A K +E++++MF+G G S+
Sbjct: 76 GEKRSETVYKEHKCKYFLDFTKVFFSEKLSYEHLRVATQVKRDEIIINMFSGFGPFSILS 135
Query: 144 AVYGKARVI-AIEKDPYTFKFLLENIQLNKVQDRMSAYNMDNRDFPGENIADRILMGYVV 202
AV G+ +++ +I+ +PY + +++ N++LNK + + Y + ADRI+
Sbjct: 136 AVLGRPKIVYSIDLNPYAYYYMMVNVELNKAYEVLPIYGDAFKRIYELEDADRIIAPLPE 195
Query: 203 KTAEFIPKALSIAKDEAIIHYHNTVPEKLMPEEPFATFKKIAREHGYEAEKINELRIKRY 262
+ AL K IIH + V E E+P +IA + Y + ++
Sbjct: 196 LADKAYEVALQKVKKGGIIHLYTEV-ETNKGEDPV----RIAM-NKYRGSYFGRI-VRSV 248
Query: 263 APGVWHVVVDIK 274
P +HVVVDIK
Sbjct: 249 NPHKYHVVVDIK 260
>gi|6321861 Yhr070wp [Saccharomyces cerevisiae] >gi|731672|sp|P38793|YHN0_YEAST
HYPOTHETICAL 56.5 KDA PROTEIN IN DYS1-PCL5 INTERGENIC
REGION >gi|626628|pir||S46697 hypothetical protein
YHR070w - yeast (Saccharomyces cerevisiae)
>gi|487945|gb|AAB68376.1| (U00061) Yhr070wp
[Saccharomyces cerevisiae]
Length = 499
Score = 75.7 bits (183), Expect = 6e-13
Identities = 59/186 (31%), Positives = 96/186 (50%), Gaps = 10/186 (5%)
Query: 9 RIREILSRELPPDLLALLPKRWVKLGDILLLPLRPELEPYKYRIAEVYA-KVLGVKTVLR 67
+ EIL LP L +P + G I L LR E +P+ I +V K ++ V+
Sbjct: 157 KAEEILRAVLPEQFLEEVPTGFTITGHIAHLNLRTEFKPFDSLIGQVILDKNNKIECVVD 216
Query: 68 K-GHIYGETRKPDYEILYG-NDTITVHV-ENGIKYKLDVAKIMFSPANVKERVRMAK-VA 123
K I + R +++ G +D++ V E+ +K D +K+ ++ E R+ K
Sbjct: 217 KVSSIATQFRTFPMKVIAGKSDSLVVEQKESNCTFKFDFSKVYWNSRLHTEHERLVKQYF 276
Query: 124 KPNELVVDMFAGIGHLSLPIAVYGKARVIAIEKD--PYTFKFLLENIQLNKVQDRMSAYN 181
+P ++V D+FAG+G ++P GK VI + D P ++K+L ENI LNKV + ++N
Sbjct: 277 QPGQVVCDVFAGVGPFAVPA---GKKDVIVLANDLNPESYKYLKENIALNKVAKTVKSFN 333
Query: 182 MDNRDF 187
MD DF
Sbjct: 334 MDGADF 339
>pir||JC4255 met-10+ protein - Neurospora crassa >gi|773387|gb|AAC41673.1|
(L40806) Restriction enzyme inactivation of met-10
complementation in this region. Sequence similarity to
S. cerevisiae chromosome VIII cosmid 9205, accession no.
U10556 CDS residues 22627-24126 [Neurospora crassa]
>gi|1583208|prf||2120297B met-10 gene [Neurospora
crassa]
Length = 475
Score = 73.7 bits (178), Expect = 2e-12
Identities = 66/213 (30%), Positives = 102/213 (46%), Gaps = 12/213 (5%)
Query: 12 EILSRELPPDLLALLPKRWVKLGDILLLPLRPELEPYKYRIAEVYA-KVLGVKTVLRKGH 70
+I++ LP +L +P + G + + LR PYK IAEV K ++TV+ K
Sbjct: 139 DIITSILPEELHDDIPSGFNTAGHVAHMNLRERYIPYKKVIAEVILDKTTNIRTVINKVD 198
Query: 71 IYG---ETRKPDYEILYGNDTITVHV-ENGIKYKLDVAKIMFSPANVKERVRMAKVAKPN 126
G E R YE+L G D + V V EN ++ D +K+ ++ E R+ + +P
Sbjct: 199 NVGAESEFRTFQYEVLAGPDDMQVQVTENACSFEFDYSKVYWNSKLEAEHRRLINMFEPG 258
Query: 127 ELVVDMFAGIGHLSLPIAVYGKARVIAIEKDPYTFKFLLENIQLNKVQDRMSAYNMDNRD 186
E+V D+ AGIG ++P G V A + +P + K++ I NKV + D R
Sbjct: 259 EVVCDVMAGIGPFAVPAGKKG-VFVWANDMNPESNKYMQVAINRNKVSQYVRPICEDGRT 317
Query: 187 FPGENIADRILMGYVVKTAEFI---PKALSIAK 216
F + AD +L + K E + PK S AK
Sbjct: 318 FI-HHAADSVLEAH--KNGEHVLIAPKPPSRAK 347
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.322 0.141 0.408
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 102872474
Number of Sequences: 2977
Number of extensions: 4209183
Number of successful extensions: 9407
Number of sequences better than 1.0e-10: 28
Number of HSP's better than 0.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 9340
Number of HSP's gapped (non-prelim): 30
length of query: 278
length of database: 189,106,746
effective HSP length: 54
effective length of query: 224
effective length of database: 156,788,448
effective search space: 35120612352
effective search space used: 35120612352
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.8 bits)
S2: 164 (68.3 bits)