BLASTP 2.0.10 [Aug-26-1999]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= PAB1539 (PAB1539) DE:ARGINASE related (EC 3.5.3.1).
         (237 letters)

Database: ./suso.pep; /banques/blast2/nr.pep
           598,487 sequences; 189,106,746 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

pir||C75035 arginase related protein PAB1539 [imported] - Pyroco...   472  e-132
pir||E71128 arginase related protein PH0794 [similarity] - Pyroc...   364  e-100

>pir||C75035 arginase related protein PAB1539 [imported] - Pyrococcus abyssi
           (strain Orsay) >gi|5458689|emb|CAB50176.1| (AJ248287)
           ARGINASE related (EC 3.5.3.1). [Pyrococcus abyssi]
           Length = 237
           
 Score =  472 bits (1201), Expect = e-132
 Identities = 237/237 (100%), Positives = 237/237 (100%)

Query: 1   MTVFVINGEEPNVEGVKYVAKLLKREGLVNEIRAVKLEDIPIDYSYVIGDHSGTYAILER 60
           MTVFVINGEEPNVEGVKYVAKLLKREGLVNEIRAVKLEDIPIDYSYVIGDHSGTYAILER
Sbjct: 1   MTVFVINGEEPNVEGVKYVAKLLKREGLVNEIRAVKLEDIPIDYSYVIGDHSGTYAILER 60

Query: 61  LGVKKVLSIDAHTDLMQDYFDHASWLAYALKDGIVEKASIVGAVLMIPTTEKTKLWTKGV 120
           LGVKKVLSIDAHTDLMQDYFDHASWLAYALKDGIVEKASIVGAVLMIPTTEKTKLWTKGV
Sbjct: 61  LGVKKVLSIDAHTDLMQDYFDHASWLAYALKDGIVEKASIVGAVLMIPTTEKTKLWTKGV 120

Query: 121 KVFPALPRTRKVRGKWKAYINLKQHGMGRVIREARKFLGREIHLTIDMDVLRPEYRIARF 180
           KVFPALPRTRKVRGKWKAYINLKQHGMGRVIREARKFLGREIHLTIDMDVLRPEYRIARF
Sbjct: 121 KVFPALPRTRKVRGKWKAYINLKQHGMGRVIREARKFLGREIHLTIDMDVLRPEYRIARF 180

Query: 181 QHGELTLRELLDLIEEIGKAFRIVSFDIAELSHRVIKSKYGRRAVVETFSRLMEVRA 237
           QHGELTLRELLDLIEEIGKAFRIVSFDIAELSHRVIKSKYGRRAVVETFSRLMEVRA
Sbjct: 181 QHGELTLRELLDLIEEIGKAFRIVSFDIAELSHRVIKSKYGRRAVVETFSRLMEVRA 237


>pir||E71128 arginase related protein PH0794 [similarity] - Pyrococcus
           horikoshii >gi|3257204|dbj|BAA29887.1| (AP000003) 237aa
           long hypothetical protein [Pyrococcus horikoshii]
           Length = 237
           
 Score =  364 bits (924), Expect = e-100
 Identities = 170/235 (72%), Positives = 209/235 (88%)

Query: 1   MTVFVINGEEPNVEGVKYVAKLLKREGLVNEIRAVKLEDIPIDYSYVIGDHSGTYAILER 60
           MTVF+ NGEEPN EGV+YVAKLLKREGLV +I    L++IP+D SYV+GDHSGTY IL++
Sbjct: 1   MTVFIPNGEEPNQEGVRYVAKLLKREGLVRDINFATLDEIPLDNSYVLGDHSGTYFILKK 60

Query: 61  LGVKKVLSIDAHTDLMQDYFDHASWLAYALKDGIVEKASIVGAVLMIPTTEKTKLWTKGV 120
           +  K ++S+DAHTDLMQDYFDHASWLAYALKD ++E+AS++GAVLMIPTT  TKLWT+ V
Sbjct: 61  IRPKAMISLDAHTDLMQDYFDHASWLAYALKDNVIERASVIGAVLMIPTTSGTKLWTRRV 120

Query: 121 KVFPALPRTRKVRGKWKAYINLKQHGMGRVIREARKFLGREIHLTIDMDVLRPEYRIARF 180
           K+FPALPRTRKVRGKWKAYINLKQHG+  VI+EA++FLG+EI+L+ID+D+L PEYRIARF
Sbjct: 121 KIFPALPRTRKVRGKWKAYINLKQHGVKAVIKEAKEFLGKEIYLSIDLDILSPEYRIARF 180

Query: 181 QHGELTLRELLDLIEEIGKAFRIVSFDIAELSHRVIKSKYGRRAVVETFSRLMEV 235
           QHGELTL+ELLDLI++I + F I++FDIAE+S+RV KSKYGRRA++E FS L EV
Sbjct: 181 QHGELTLKELLDLIDKIKENFDIIAFDIAEISYRVAKSKYGRRAIIEAFSSLKEV 235


  Database: ./suso.pep
    Posted date:  Jul 6, 2001  5:57 PM
  Number of letters in database: 840,471
  Number of sequences in database:  2977
  
  Database: /banques/blast2/nr.pep
    Posted date:  Dec 14, 2000 12:46 PM
  Number of letters in database: 188,266,275
  Number of sequences in database:  595,510
  
Lambda     K      H
   0.323    0.141    0.402 

Gapped
Lambda     K      H
   0.270   0.0470    0.230 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 82360424
Number of Sequences: 2977
Number of extensions: 3330079
Number of successful extensions: 9169
Number of sequences better than 1.0e-10: 2
Number of HSP's better than  0.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 9167
Number of HSP's gapped (non-prelim): 2
length of query: 237
length of database: 189,106,746
effective HSP length: 54
effective length of query: 183
effective length of database: 156,788,448
effective search space: 28692285984
effective search space used: 28692285984
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.9 bits)
S2: 164 (68.3 bits)