BLASTP 2.0.10 [Aug-26-1999]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= PAB1583 (PAB1583) DE:ACETYLTRANSFERASE
         (268 letters)

Database: ./suso.pep; /banques/blast2/nr.pep
           598,487 sequences; 189,106,746 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

pir||F75100 acetyltransferase PAB1583 - Pyrococcus abyssi (strai...   553  e-157
pir||G71115 hypothetical protein PH0694 - Pyrococcus horikoshii ...   363  2e-99

>pir||F75100 acetyltransferase PAB1583 - Pyrococcus abyssi (strain Orsay)
           >gi|5458619|emb|CAB50107.1| (AJ248286) ACETYLTRANSFERASE
           [Pyrococcus abyssi]
           Length = 268
           
 Score =  553 bits (1410), Expect = e-157
 Identities = 268/268 (100%), Positives = 268/268 (100%)

Query: 1   MQIREARPEDRPFIEDISRLTWEGEDYLAKVFDDWLGDNFYVLEVEGKVVGTVKLTILPG 60
           MQIREARPEDRPFIEDISRLTWEGEDYLAKVFDDWLGDNFYVLEVEGKVVGTVKLTILPG
Sbjct: 1   MQIREARPEDRPFIEDISRLTWEGEDYLAKVFDDWLGDNFYVLEVEGKVVGTVKLTILPG 60

Query: 61  KVGWLEGLRVHPEYRGRGYGRVLHNFMLDLGKRLAQEGKIKALEFATYFFNKASISLAEK 120
           KVGWLEGLRVHPEYRGRGYGRVLHNFMLDLGKRLAQEGKIKALEFATYFFNKASISLAEK
Sbjct: 61  KVGWLEGLRVHPEYRGRGYGRVLHNFMLDLGKRLAQEGKIKALEFATYFFNKASISLAEK 120

Query: 121 TGFYVKAKFFVFGAKTESFEPEEPTKVDLELKHLTLGIIPVGWRFVRRSEEAVDWIKKNA 180
           TGFYVKAKFFVFGAKTESFEPEEPTKVDLELKHLTLGIIPVGWRFVRRSEEAVDWIKKNA
Sbjct: 121 TGFYVKAKFFVFGAKTESFEPEEPTKVDLELKHLTLGIIPVGWRFVRRSEEAVDWIKKNA 180

Query: 181 ELYEINGVYFLASKLWTVFTPLDVGLPLLKLMLPGMAWVARERGEEEFEVMLPSGVKPLL 240
           ELYEINGVYFLASKLWTVFTPLDVGLPLLKLMLPGMAWVARERGEEEFEVMLPSGVKPLL
Sbjct: 181 ELYEINGVYFLASKLWTVFTPLDVGLPLLKLMLPGMAWVARERGEEEFEVMLPSGVKPLL 240

Query: 241 PGIKRLNLYLWDETENPNVLVFRKEVRV 268
           PGIKRLNLYLWDETENPNVLVFRKEVRV
Sbjct: 241 PGIKRLNLYLWDETENPNVLVFRKEVRV 268


>pir||G71115 hypothetical protein PH0694 - Pyrococcus horikoshii
           >gi|3257102|dbj|BAA29785.1| (AP000003) 272aa long
           hypothetical protein [Pyrococcus horikoshii]
           Length = 272
           
 Score =  363 bits (921), Expect = 2e-99
 Identities = 161/267 (60%), Positives = 219/267 (81%), Gaps = 1/267 (0%)

Query: 3   IREARPEDRPFIEDISRLTWEGEDYLAKVFDDWLGD-NFYVLEVEGKVVGTVKLTILPGK 61
           IREA+P+D+P IE+I+RLTW+GEDYLA VFD+W+ D NFYVLE+ GKV+GTVKLT LP +
Sbjct: 6   IREAKPQDKPSIEEIARLTWDGEDYLACVFDEWIKDGNFYVLELNGKVIGTVKLTFLPNR 65

Query: 62  VGWLEGLRVHPEYRGRGYGRVLHNFMLDLGKRLAQEGKIKALEFATYFFNKASISLAEKT 121
           VGW+EGLRVHP Y GRG+G++LH+F+++ G  LA EGKI+ALEF+TYF NK +I++AEK 
Sbjct: 66  VGWMEGLRVHPNYHGRGFGKMLHDFIVEKGMVLANEGKIEALEFSTYFLNKKTIAMAEKD 125

Query: 122 GFYVKAKFFVFGAKTESFEPEEPTKVDLELKHLTLGIIPVGWRFVRRSEEAVDWIKKNAE 181
           GF+VKA+FFV   +   FE EEPT+++  ++ LTLGIIPVGWRF++RSEEA++WI++NAE
Sbjct: 126 GFWVKARFFVASVRVSDFEAEEPTRIEPRIEDLTLGIIPVGWRFIKRSEEALEWIRRNAE 185

Query: 182 LYEINGVYFLASKLWTVFTPLDVGLPLLKLMLPGMAWVARERGEEEFEVMLPSGVKPLLP 241
           +YE NG++FL  K  T FTPL+ G  +L+++LP MAWVA+E+  EEF +MLPS VKP+LP
Sbjct: 186 VYEYNGLHFLGPKNGTTFTPLEPGPAVLRVLLPAMAWVAKEKNREEFSLMLPSSVKPVLP 245

Query: 242 GIKRLNLYLWDETENPNVLVFRKEVRV 268
             +R+ +++WD  + PNV VFRK++ V
Sbjct: 246 VFRRIGVHIWDNAKEPNVFVFRKKLGV 272


  Database: ./suso.pep
    Posted date:  Jul 6, 2001  5:57 PM
  Number of letters in database: 840,471
  Number of sequences in database:  2977
  
  Database: /banques/blast2/nr.pep
    Posted date:  Dec 14, 2000 12:46 PM
  Number of letters in database: 188,266,275
  Number of sequences in database:  595,510
  
Lambda     K      H
   0.322    0.143    0.438 

Gapped
Lambda     K      H
   0.270   0.0470    0.230 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 107328812
Number of Sequences: 2977
Number of extensions: 4660136
Number of successful extensions: 10537
Number of sequences better than 1.0e-10: 2
Number of HSP's better than  0.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 10534
Number of HSP's gapped (non-prelim): 2
length of query: 268
length of database: 189,106,746
effective HSP length: 50
effective length of query: 218
effective length of database: 159,182,396
effective search space: 34701762328
effective search space used: 34701762328
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.8 bits)
S2: 164 (68.3 bits)