BLASTP 2.0.10 [Aug-26-1999]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= PAB1585 (PAB1585) DE:Hypothetical protein
         (110 letters)

Database: ./suso.pep; /banques/blast2/nr.pep
           598,487 sequences; 189,106,746 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

pir||D75100 hypothetical protein PAB1585 - Pyrococcus abyssi (st...   217  2e-56
gi|11546068 hypothetical protein [Archaeoglobus fulgidus]             133  7e-31
pir||B69326 hypothetical protein AF0610 - Archaeoglobus fulgidus...    76  1e-13

>pir||D75100 hypothetical protein PAB1585 - Pyrococcus abyssi (strain Orsay)
           >gi|5458617|emb|CAB50105.1| (AJ248286) hypothetical
           protein [Pyrococcus abyssi]
           Length = 110
           
 Score =  217 bits (548), Expect = 2e-56
 Identities = 110/110 (100%), Positives = 110/110 (100%)

Query: 1   MVVLDTSIVIDRVKRKDEIKENITGITFVEYPAIIRYKKFHGNVLFPTFEDFLLAHKIQE 60
           MVVLDTSIVIDRVKRKDEIKENITGITFVEYPAIIRYKKFHGNVLFPTFEDFLLAHKIQE
Sbjct: 1   MVVLDTSIVIDRVKRKDEIKENITGITFVEYPAIIRYKKFHGNVLFPTFEDFLLAHKIQE 60

Query: 61  RLLKIGKPKAFADLLIASICISNNEELITKDKDFLDIARVSNLRVKVIDV 110
           RLLKIGKPKAFADLLIASICISNNEELITKDKDFLDIARVSNLRVKVIDV
Sbjct: 61  RLLKIGKPKAFADLLIASICISNNEELITKDKDFLDIARVSNLRVKVIDV 110


>gi|11546068 hypothetical protein [Archaeoglobus fulgidus]
           Length = 111
           
 Score =  133 bits (331), Expect = 7e-31
 Identities = 68/110 (61%), Positives = 87/110 (78%), Gaps = 1/110 (0%)

Query: 1   MVVLDTSIVIDRVKRKDEIKENITGITFVEYPAIIRYKKFHGNVLFPTFEDFLLAHKIQE 60
           MVV DT++VI+RVK+ + I+ENIT +T VE+P +I YKKFHG VL     D LL+ ++Q 
Sbjct: 1   MVVADTNLVIERVKKNESIEENITEVTIVEFPPVINYKKFHGKVLIIERGDVLLSIELQR 60

Query: 61  RLLKIGKP-KAFADLLIASICISNNEELITKDKDFLDIARVSNLRVKVID 109
           RL  + KP K F+DLLIASICI+ +EELITKD+DFLDIA VSNLRVK+I+
Sbjct: 61  RLRIVRKPRKPFSDLLIASICINRDEELITKDRDFLDIAEVSNLRVKLIE 110


>pir||B69326 hypothetical protein AF0610 - Archaeoglobus fulgidus
          >gi|2650012|gb|AAB90631.1| (AE001062) A. fulgidus
          predicted coding region AF0610 [Archaeoglobus fulgidus]
          Length = 75
          
 Score = 76.1 bits (184), Expect = 1e-13
 Identities = 36/69 (52%), Positives = 50/69 (72%)

Query: 1  MVVLDTSIVIDRVKRKDEIKENITGITFVEYPAIIRYKKFHGNVLFPTFEDFLLAHKIQE 60
          MVV DT++VI+RVK+ + I+ENIT +T VE+P +I YKKFHG VL     D LL+ ++Q 
Sbjct: 1  MVVADTNLVIERVKKNESIEENITEVTIVEFPPVINYKKFHGKVLIIERGDVLLSIELQR 60

Query: 61 RLLKIGKPK 69
          RL  + KP+
Sbjct: 61 RLRIVRKPR 69


  Database: ./suso.pep
    Posted date:  Jul 6, 2001  5:57 PM
  Number of letters in database: 840,471
  Number of sequences in database:  2977
  
  Database: /banques/blast2/nr.pep
    Posted date:  Dec 14, 2000 12:46 PM
  Number of letters in database: 188,266,275
  Number of sequences in database:  595,510
  
Lambda     K      H
   0.326    0.144    0.399 

Gapped
Lambda     K      H
   0.270   0.0470    0.230 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 36508771
Number of Sequences: 2977
Number of extensions: 1330240
Number of successful extensions: 3527
Number of sequences better than 1.0e-10: 3
Number of HSP's better than  0.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 3523
Number of HSP's gapped (non-prelim): 3
length of query: 110
length of database: 189,106,746
effective HSP length: 52
effective length of query: 58
effective length of database: 157,985,422
effective search space: 9163154476
effective search space used: 9163154476
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 40 (21.6 bits)
S2: 159 (66.3 bits)