BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB1587 (PAB1587) DE:glycosyltransferase
(233 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||B75100 glycosyltransferase PAB1587 - Pyrococcus abyssi (str... 479 e-134
pir||E69142 mannosyltransferase - Methanobacterium thermoautotro... 148 7e-35
gi|11497999 glycosyltransferase, putative [Archaeoglobus fulgidu... 140 1e-32
pir||B71154 hypothetical protein PH0433 - Pyrococcus horikoshii ... 137 1e-31
gb|AAD01952.1| (AF033015) unknown [Listeria monocytogenes] 118 4e-26
pir||F75058 dolichol-p-glucose synthetase PAB1411 - Pyrococcus a... 117 1e-25
gi|11497940 dolichol-P-glucose synthetase, putative [Archaeoglob... 105 4e-22
sp|Q58619|YC22_METJA HYPOTHETICAL PROTEIN MJ1222 >gi|2128734|pir... 99 3e-20
gi|11497660 dolichol-P-glucose synthetase, putative [Archaeoglob... 99 6e-20
pir||D71038 hypothetical protein PH1596 - Pyrococcus horikoshii ... 94 1e-18
pir||D75177 dolichyl-phosphate mannose synthase PAB1971 - Pyroco... 93 3e-18
emb|CAC11300.1| (AL445063) conserved hypothetical protein [Therm... 93 3e-18
gb|AAG19351.1| (AE005030) galactosyltransferase homolog; Gst [Ha... 91 9e-18
pir||A71037 hypothetical protein PH1585 - Pyrococcus horikoshii ... 89 5e-17
pir||A75176 dolichyl-phosphate mannose synthase related protein ... 87 1e-16
gb|AAG19457.1| (AE005038) glycosyl transferase-like; Gtl [Haloba... 82 5e-15
pir||T38633 dolichol monophosphate mannose synthase - fission ye... 80 2e-14
pir||S77381 rfbJ protein - Synechocystis sp. (strain PCC 6803) >... 77 2e-13
gi|11498189 dolichol-P-glucose synthetase, putative [Archaeoglob... 77 2e-13
pir||G69047 conserved hypothetical protein MTH136 - Methanobacte... 76 4e-13
pir||G69148 dolichyl-phosphate mannose synthase related protein ... 73 4e-12
gb|AAG00234.1|AF283817_1 (AF283817) dolichol phosphate mannose s... 72 5e-12
gb|AAC98796.1| (AF007874) dolichol monophosphate mannose synthas... 72 7e-12
pir||D69148 dolichyl-phosphate mannose synthase related protein ... 72 7e-12
gi|4503363 dolichyl-phosphate mannosyltransferase polypeptide 1;... 70 3e-11
gb|AAF53817.1| (AE003663) CG10166 gene product [Drosophila melan... 69 5e-11
>pir||B75100 glycosyltransferase PAB1587 - Pyrococcus abyssi (strain Orsay)
>gi|5458615|emb|CAB50103.1| (AJ248286)
glycosyltransferase [Pyrococcus abyssi]
Length = 233
Score = 479 bits (1220), Expect = e-134
Identities = 233/233 (100%), Positives = 233/233 (100%)
Query: 1 MKRVVVLLPAYNEEETIGKVIDEIPVKKLEKEGYKVTVVVANGPSTDRTEEIARNKGAIV 60
MKRVVVLLPAYNEEETIGKVIDEIPVKKLEKEGYKVTVVVANGPSTDRTEEIARNKGAIV
Sbjct: 1 MKRVVVLLPAYNEEETIGKVIDEIPVKKLEKEGYKVTVVVANGPSTDRTEEIARNKGAIV 60
Query: 61 YNIAKGGKARDVKHALSMIDFPYDYLVMLDADYTYPPQYIYDIVKALEEYDVVIGSRLKG 120
YNIAKGGKARDVKHALSMIDFPYDYLVMLDADYTYPPQYIYDIVKALEEYDVVIGSRLKG
Sbjct: 61 YNIAKGGKARDVKHALSMIDFPYDYLVMLDADYTYPPQYIYDIVKALEEYDVVIGSRLKG 120
Query: 121 KIEDGAMPKVNKLGNWGLSLIATILYGKKISDVCTGMWGFRKYVLDSIEIDANGFDLEAN 180
KIEDGAMPKVNKLGNWGLSLIATILYGKKISDVCTGMWGFRKYVLDSIEIDANGFDLEAN
Sbjct: 121 KIEDGAMPKVNKLGNWGLSLIATILYGKKISDVCTGMWGFRKYVLDSIEIDANGFDLEAN 180
Query: 181 LYVEAVKKGFKIGEVPINYRKRPNKPKLGNGNPWGAVKTGLKIGWYLVRKRFK 233
LYVEAVKKGFKIGEVPINYRKRPNKPKLGNGNPWGAVKTGLKIGWYLVRKRFK
Sbjct: 181 LYVEAVKKGFKIGEVPINYRKRPNKPKLGNGNPWGAVKTGLKIGWYLVRKRFK 233
>pir||E69142 mannosyltransferase - Methanobacterium thermoautotrophicum (strain
Delta H) >gi|2621387|gb|AAB84837.1| (AE000818)
mannosyltransferase [Methanobacterium
thermoautotrophicum]
Length = 221
Score = 148 bits (369), Expect = 7e-35
Identities = 95/233 (40%), Positives = 139/233 (58%), Gaps = 21/233 (9%)
Query: 7 LLPAYNEEETIGKVIDEIPVKKLEKEGYKVTVVVANGPSTDRTEEIARNKGAIVYNIAKG 66
L+PAYNEE++IG +ID I + + E ++V + S+DRT EIA ++G V K
Sbjct: 4 LIPAYNEEKSIGPLIDRIKMLCPDSE-----IIVVDNNSSDRTSEIATSRGVRVIFEGKQ 58
Query: 67 GKARDVKHALSMIDFPYDYLVMLDADYTYPP---QYIYDIVKALEEYDVVIGSRLKGKIE 123
GKA + A + +Y VM+DAD TY P + + +++KA E DVV+GSRL G+ E
Sbjct: 59 GKANAMVAAFR--NTRTEYAVMMDADLTYLPDDSRVLVEVLKA-EGADVVLGSRLNGEKE 115
Query: 124 DGAMPKVNKLGNWGLSLIATILYGKKISDVCTGMWGFRKYVLDSI---EIDANGFDLEAN 180
DGA+ ++N +GN LS A+ILY +SDVCTG W F + + I ++ +GF+LEA
Sbjct: 116 DGAISRINTVGNHILSFTASILY-SPVSDVCTGHWAFNRRAIRHILEEGLNYSGFELEAE 174
Query: 181 LYVEAVKKGFKIGEVPINYRKRPNKPKLGNGNPWGAVKTGLKIGWYLVRKRFK 233
++ + + G KI EVPI YRKR ++PKL + G KI LV +R +
Sbjct: 175 MFSKLARAGLKIVEVPITYRKRSDEPKL------SSFTDGFKIFRTLVLERLR 221
>gi|11497999 glycosyltransferase, putative [Archaeoglobus fulgidus]
>gi|7445538|pir||C69298 glycosyltransferase homolog -
Archaeoglobus fulgidus >gi|2650247|gb|AAB90850.1|
(AE001078) glycosyltransferase, putative [Archaeoglobus
fulgidus]
Length = 305
Score = 140 bits (350), Expect = 1e-32
Identities = 88/223 (39%), Positives = 131/223 (58%), Gaps = 18/223 (8%)
Query: 4 VVVLLPAYNEEETIGKVIDEIPVKKLEKEGYKVTVVVANGPSTDRTEEIARNKGAIVYNI 63
V V++P NEEE IG+V++ K G++V V+ +G S DRT EIAR KGA V
Sbjct: 3 VTVVIPTLNEEEAIGEVVEGFA-----KRGFRVLVI--DGNSKDRTREIAREKGAEVVIQ 55
Query: 64 AKGGKARDVKHALSMIDFPYDYLVMLDADYTYPPQYIYDIVKALEE--YDVVIGSRLKGK 121
+ GK + V A ++D D LV++D D TY P+ +Y +++ ++E D VIG+R
Sbjct: 56 SGKGKGQAVAEAFEIVDS--DILVLVDGDGTYLPEEVYRLLEPIKEGGADHVIGNRF-AS 112
Query: 122 IEDGAMPKVNKLGNWGLSLIATILYGKKISDVCTGMWGFRKYVLDSIEIDANGFDLEANL 181
E GA ++N +GN L++ + YG ++ D+ +G +K V S+E+ GF++E L
Sbjct: 113 FEKGAFTRLNLIGNKLLNMFFRLAYGVELRDILSGYRALKKEVYKSVELTKPGFEVETEL 172
Query: 182 YVEAVKKGFKIGEVPINYRKRPNKPKLGNGNPWGAVKTGLKIG 224
VE + KGF+I EVPI YRKR K KL NP ++ G +IG
Sbjct: 173 TVETLAKGFRIVEVPITYRKRGGKTKL---NP---LRDGFRIG 209
>pir||B71154 hypothetical protein PH0433 - Pyrococcus horikoshii
>gi|3256836|dbj|BAA29519.1| (AP000002) 304aa long
hypothetical protein [Pyrococcus horikoshii]
Length = 304
Score = 137 bits (341), Expect = 1e-31
Identities = 91/226 (40%), Positives = 127/226 (55%), Gaps = 23/226 (10%)
Query: 4 VVVLLPAYNEEETIGKVIDEIPVKKLEKEGYKVTVVVANGPSTDRTEEIARNKGAIVYNI 63
V +L+P NEEE IG VI+E +K GY ++V +G STDRT EIA+ KGA V
Sbjct: 10 VTILIPTKNEEEGIGWVIEEF-----KKLGYN-NILVIDGHSTDRTREIAKEKGAKVVLQ 63
Query: 64 AKGGKARDVKHALSMIDFPYDYLVMLDADYTYPPQYIYDIVKALEEY-----DVVIGSRL 118
GK + V A +ID + +V++D D TY P+ D+ K LE + VIG+RL
Sbjct: 64 TGKGKGQAVAEAFKLIDS--EVVVLIDGDGTYDPK---DVEKMLEPIRRGIAEHVIGNRL 118
Query: 119 KGKIEDGAMPKVNKLGNWGLSLIATILYGKKISDVCTGMWGFRKYVLDSIEIDANGFDLE 178
+ EDGA ++N +GN + + LYG + D+ +G F K + S+E+ +GF++E
Sbjct: 119 EN-FEDGAFTRLNLIGNKIFNALFRFLYGVPVYDMLSGYRAFTKELYKSVELKKHGFEVE 177
Query: 179 ANLYVEAVKKGFKIGEVPINYRKRPNKPKLGNGNPWGAVKTGLKIG 224
L VE V KGF+I EVPINY KR K L +K G +IG
Sbjct: 178 TELTVETVAKGFRIAEVPINYYKRKGKANL------HPIKDGWRIG 217
>gb|AAD01952.1| (AF033015) unknown [Listeria monocytogenes]
Length = 315
Score = 118 bits (294), Expect = 4e-26
Identities = 79/235 (33%), Positives = 129/235 (54%), Gaps = 22/235 (9%)
Query: 2 KRVVVLLPAYNEEETIGKVIDEIPVKKLEKEGYKVTVVVANGPSTDRTEEIARNKGAIVY 61
++V VLLP YNEE TIGKVID+ +KE + V + S D+T EIA++ GAIV
Sbjct: 6 EKVAVLLPCYNEELTIGKVIDDF-----KKELPNADIYVYDNNSKDKTFEIAKDHGAIVR 60
Query: 62 NIAKGGKARDVKHALSMIDFPYDYLVMLDADYTYPPQYIYDIVKAL--EEYDVVIGSRLK 119
+ GK V+ + ID DY +M+D D TYP +Y ++I++ L +E ++VIG RL
Sbjct: 61 KEMRQGKGNVVRSMFADIDA--DYYLMVDGDDTYPAEYCHEILEVLRNKEANMVIGDRLS 118
Query: 120 GKIEDGAMPKVNKLG--NWGLSLIATIL---YGKKISDVCTGMWGFRKYVLDSIEIDANG 174
+G + NK ++G SL+ + + + D+ TG GF +Y + ++ + + G
Sbjct: 119 ----NGTYTEENKRNFHDFGNSLVRNTINRIFKSNLRDIMTGYRGFDRYFVKTMPVLSPG 174
Query: 175 FDLEANLYVEAVKKGFKIGEVPINYRKRPNKPKLGNGNPWGAVKTGLKIGWYLVR 229
F++E + + A++ F + E+ I+YR RP G+ + G K+ +VR
Sbjct: 175 FEIETEMSIHALENRFLVKEIEIDYRDRPE----GSESKLNTFSDGFKVIMTIVR 225
>pir||F75058 dolichol-p-glucose synthetase PAB1411 - Pyrococcus abyssi (strain
Orsay) >gi|5458876|emb|CAB50363.1| (AJ248287)
DOLICHOL-P-GLUCOSE SYNTHETASE [Pyrococcus abyssi]
Length = 378
Score = 117 bits (291), Expect = 1e-25
Identities = 79/208 (37%), Positives = 115/208 (54%), Gaps = 7/208 (3%)
Query: 4 VVVLLPAYNEEETIGKVIDEIPVKKLEKEGYKVTVVVANGPSTDRTEEIARNKGAIVYNI 63
V V+LP NEE+ + KVI +I + L + G ++V + S D+T EIARN GA V I
Sbjct: 10 VSVILPTMNEEKAVEKVIPQIK-ETLAQMGVTYEIIVVD-KSNDKTPEIARNLGAKV--I 65
Query: 64 AKGGKARDVKHALSMIDFPYDYLVMLDADYTYPPQYIYDIVKAL--EEYDVVIGSRLKGK 121
+ GK + Y+VM+D D +Y P+ I +++ L E D VIGSRLKGK
Sbjct: 66 RQKGKGYGDAYLEGFKVAKGKYIVMMDPDGSYDPKEIPKLLEILRKEAADFVIGSRLKGK 125
Query: 122 IEDGAMPKVNK-LGNWGLSLIATILYGKKISDVCTGMWGFRKYVLDSIEIDANGFDLEAN 180
IE GAMP +++ +GN L+ I L+ K+SD +G ++ L + + G + +
Sbjct: 126 IEPGAMPWLHRYIGNPLLTKILNFLFKIKVSDAHSGFRAIKRDALQKLTLKCRGMEFASE 185
Query: 181 LYVEAVKKGFKIGEVPINYRKRPNKPKL 208
+ +EA K G KI EVPI Y R + KL
Sbjct: 186 MIIEAAKAGLKIAEVPITYHPRIGESKL 213
>gi|11497940 dolichol-P-glucose synthetase, putative [Archaeoglobus fulgidus]
>gi|7483293|pir||H69290 dolichol-P-glucose synthetase
homolog - Archaeoglobus fulgidus
>gi|2650309|gb|AAB90908.1| (AE001082) dolichol-P-glucose
synthetase, putative [Archaeoglobus fulgidus]
Length = 371
Score = 105 bits (260), Expect = 4e-22
Identities = 81/211 (38%), Positives = 109/211 (51%), Gaps = 19/211 (9%)
Query: 4 VVVLLPAYNEEETIGKVIDEIPVKKLEKEGYKVTVVVANGPSTDRTEEIARNKGAIVYNI 63
+ V+LP NEE K I+EI VKK G K +VV + STD T EIA G V
Sbjct: 2 ITVVLPTKNEE----KAIEEI-VKKCLVVGVKEIIVVDD--STDSTPEIAEKLGCRVIKN 54
Query: 64 AKG-GKA--RDVKHALSMIDFPYDYLVMLDADYTYPPQYIYDIVKAL--EEYDVVIGSRL 118
KG G A +KHA D +V++DAD TY P I +V+ + +E DVVIGSR
Sbjct: 55 VKGYGNAYLEGLKHASG------DIIVLMDADGTYDPAEIPKLVEPILRDEADVVIGSRF 108
Query: 119 KGKIEDGAMPKVNK-LGNWGLSLIATILYGKKISDVCTGMWGFRKYVLDSIEIDANGFDL 177
KGKI GAMP +K LGN L+ + L+G SDV +G +K L +++ G +
Sbjct: 109 KGKIMPGAMPWHHKYLGNPLLTKLTNFLFGTGFSDVHSGFRAIKKSSLSQLDLKCPGMEF 168
Query: 178 EANLYVEAVKKGFKIGEVPINYRKRPNKPKL 208
++ G ++ EVP+ Y R KL
Sbjct: 169 ATEFVLKTTMSGLRLLEVPVTYYPRKGDSKL 199
>sp|Q58619|YC22_METJA HYPOTHETICAL PROTEIN MJ1222 >gi|2128734|pir||E64452 conserved
hypothetical protein MJ1222 - Methanococcus jannaschii
>gi|1591853|gb|AAB99226.1| (U67563) dolichol-P-glucose
synthetase isolog [Methanococcus jannaschii]
Length = 243
Score = 99.5 bits (244), Expect = 3e-20
Identities = 70/203 (34%), Positives = 113/203 (55%), Gaps = 18/203 (8%)
Query: 4 VVVLLPAYNEEETIGKVIDEIPVKKLEKEGYKVTVVVANGPSTDRTEEIARNKGAIV--- 60
+ V++PA+NEE+ IG+ + K L+KEGYK VVV +G S D+T EIA+ +G IV
Sbjct: 19 IFVVVPAFNEEKMIGETL-----KNLKKEGYKNIVVVDDG-SMDKTSEIAKKEGVIVCRH 72
Query: 61 -YNIAKGGK-ARDVKHALSMIDFPYDYLVMLDADYTYPPQYIYDIVKAL--EEYDVVIGS 116
N GG +K AL + ++ DAD + P+ + +VK + E YD+ IGS
Sbjct: 73 ILNRGLGGALGTGIKCALL---YKPKIIITFDADGQHHPKDVEKVVKPVLFEGYDMAIGS 129
Query: 117 RLKGKIEDGAMPKVNKLGNWGLSLIATILYGKKISDVCTGMWGFRKYVLDSI--EIDANG 174
R+ K E MP V ++GN+GL+ I ++ G ++D +G+ F I ++ ++
Sbjct: 130 RMMDKNELKNMPLVKRIGNFGLNFITYLMGGYFVTDSQSGLRAFSYEAAKKIIGDLKSDR 189
Query: 175 FDLEANLYVEAVKKGFKIGEVPI 197
+++ + + A K G K+ EVPI
Sbjct: 190 YEVSSEFIILAKKHGLKLKEVPI 212
>gi|11497660 dolichol-P-glucose synthetase, putative [Archaeoglobus fulgidus]
>gi|7483292|pir||G69254 dolichol-P-glucose synthetase
homolog - Archaeoglobus fulgidus
>gi|2650613|gb|AAB91190.1| (AE001104) dolichol-P-glucose
synthetase, putative [Archaeoglobus fulgidus]
Length = 369
Score = 98.7 bits (242), Expect = 6e-20
Identities = 79/214 (36%), Positives = 110/214 (50%), Gaps = 22/214 (10%)
Query: 3 RVVVLLPAYNEEETIGKVIDEIPVKKLEKEGYKVTVVVANGPSTDRTEEIARNKGAIVYN 62
+V ++LP +E+ +I KV+ + EKE ++ S DRT EIA G V
Sbjct: 2 KVSIVLPTKDEQNSIEKVVRDCLSLGFEKE------IIVVDDSADRTPEIAEKLGCKVIR 55
Query: 63 IAKG-GKA--RDVKHALSMIDFPYDYLVMLDADYTYP----PQYIYDIVKALEEYDVVIG 115
KG G+A +H+ D +VMLDAD +Y P+ I IVK E D+VIG
Sbjct: 56 GVKGYGRAFLEGFRHSSG------DIIVMLDADGSYDALEIPRLIEPIVKG--EADLVIG 107
Query: 116 SRLKGKIEDGAMPKVNK-LGNWGLSLIATILYGKKISDVCTGMWGFRKYVLDSIEIDANG 174
SR KGKI AMP ++ +GN L+ + +L+ K+SDV +GM RK L I+ G
Sbjct: 108 SRFKGKIMPKAMPWHHRYVGNPVLTKLTNLLFKTKLSDVHSGMRALRKDALAKIDPVCPG 167
Query: 175 FDLEANLYVEAVKKGFKIGEVPINYRKRPNKPKL 208
+ L ++A KG +I EVPI Y R KL
Sbjct: 168 MEFATELVLKAAIKGLRIVEVPITYHPRIGFSKL 201
>pir||D71038 hypothetical protein PH1596 - Pyrococcus horikoshii
>gi|3258025|dbj|BAA30708.1| (AP000006) 215aa long
hypothetical protein [Pyrococcus horikoshii]
Length = 215
Score = 94.0 bits (230), Expect = 1e-18
Identities = 67/201 (33%), Positives = 107/201 (52%), Gaps = 17/201 (8%)
Query: 3 RVVVLLPAYNEEETIGKVIDEIPVKKLEKEGYKVTVVVANGPSTDRTEEIARNKGAIVYN 62
++ V++PAYNEE IG V+ IP + V+V + S+D T ++A GA V
Sbjct: 6 KISVIIPAYNEERRIGNVLKGIP-------DFVDEVIVVDDGSSDGTSKVAMELGATVIR 58
Query: 63 IAK-GGKARDVKHALSMIDFPYDYLVMLDADYTYPPQYIYDIVKALEE--YDVVIGSRLK 119
+ K GK ++ L + D +V +DAD + P+ IY +VK + E D+VIG R+
Sbjct: 59 LNKNSGKGAAMREGLKI--STGDIIVFMDADGQHNPKEIYRLVKPIVEGRADLVIGRRI- 115
Query: 120 GKIEDGAMPKVNKLGNWGLSLIATILYGKKISDVCTGMWGFRKYVLDSIEIDANGFDLEA 179
I G P K+ N+ + + T+ KKI D +G R+ + IE D +++E
Sbjct: 116 --ITRGKRPMSRKISNFITTRLITLKTRKKILDTQSGFRAIRREFVPVIESDR--YEVET 171
Query: 180 NLYVEAVKKGFKIGEVPINYR 200
+ ++A+KKG +I EVPI+ R
Sbjct: 172 EVLIKAIKKGARILEVPISTR 192
>pir||D75177 dolichyl-phosphate mannose synthase PAB1971 - Pyrococcus abyssi
(strain Orsay) >gi|5458009|emb|CAB49499.1| (AJ248284)
DOLICHYL-PHOSPHATE MANNOSE SYNTHASE [Pyrococcus abyssi]
Length = 287
Score = 92.8 bits (227), Expect = 3e-18
Identities = 62/201 (30%), Positives = 109/201 (53%), Gaps = 11/201 (5%)
Query: 1 MKRVVVLLPAYNEEETIGKVIDEIPVKKLEKEGYKVTVVVANGPSTDRTEEIARNKGA-I 59
+ + +++PAYNEE+TIG V+D + ++ +E ++V + S DRT EIA++KG +
Sbjct: 62 LMKTYIVMPAYNEEKTIGDVLDSL-LRVFPREN----IIVVDDGSRDRTREIAKSKGVHV 116
Query: 60 VYNIAKGGKARDVKHALSMIDFP-YDYLVMLDADYTYPPQYIYDIVKALEE--YDVVIGS 116
V +I G + + + + +V DAD + + ++K + E D+ IGS
Sbjct: 117 VSHIINRGLGGALGTGIRYAVYKGAEIVVTFDADGQHIVEDALRVIKPVAEGKTDLAIGS 176
Query: 117 RLKGKIEDGAMPKVNKLGNWGLSLIATILYGKKISDVCTGMWGFRKYVLDSIEIDANGFD 176
R KG + MP V ++GN L+LI I + ISD +G+ F + ++I +G+
Sbjct: 177 RFKGNLNQ--MPLVKRVGNIALNLITAIFAFRYISDTQSGLRAFSRNCASRVKITCDGYA 234
Query: 177 LEANLYVEAVKKGFKIGEVPI 197
+ + + VEA +K +I E+PI
Sbjct: 235 VSSEIIVEASRKKCRIVEIPI 255
>emb|CAC11300.1| (AL445063) conserved hypothetical protein [Thermoplasma
acidophilum]
Length = 225
Score = 92.8 bits (227), Expect = 3e-18
Identities = 66/208 (31%), Positives = 104/208 (49%), Gaps = 11/208 (5%)
Query: 3 RVVVLLPAYNEEETIGKVIDEIPVKKLEKEGYKVTVVVANGPSTDRTEEIARNKGAIVYN 62
+V ++P NEE TIG VID I + E ++V + STDRT EIAR+KGA V
Sbjct: 7 KVSFVIPTINEEGTIGSVIDGIRSEFPNSE-----IIVVDTNSTDRTREIARSKGARVIE 61
Query: 63 IAKGGKARDVKHALSMIDFPYDYLVMLDADYTYPPQYIYDIVKAL--EEYDVVIGSRLKG 120
+ G R + + + +V +D D TYP + +++ L + D + R+
Sbjct: 62 EPRRGYGRAYQTGIPAASG--EIIVCMDGDGTYPTDVVKPLIELLIADRVDFISCDRITF 119
Query: 121 KIEDGAMPKVNKLGNWGLSLIATILYGKKISDVCTGMWGFRKYVLDSIEIDANGFDLEAN 180
+ ++ +GN L+L IL+ ++ D +GMW FR + ++ NG N
Sbjct: 120 RTSKN-YTTLHYVGNMVLNLTIRILFKVRMVDSQSGMWVFRSEIYRKMKNLGNGMSFSQN 178
Query: 181 LYVEAVKKGFKIGEVPINYRKRPNKPKL 208
+ +EAV+ G + E+PI Y R KPKL
Sbjct: 179 IKIEAVRHGVFM-EIPIRYGVRITKPKL 205
>gb|AAG19351.1| (AE005030) galactosyltransferase homolog; Gst [Halobacterium sp.
NRC-1]
Length = 229
Score = 91.3 bits (223), Expect = 9e-18
Identities = 70/206 (33%), Positives = 99/206 (47%), Gaps = 11/206 (5%)
Query: 4 VVVLLPAYNEEETIGKVIDEIPVKKLEKEGYKVTVVVANGPSTDRTEEIARNKGAIVYNI 63
V V + YNE I V+ +I + + VV +G S+DRT EIAR GA V
Sbjct: 11 VTVAMGTYNEAAAIDTVLTDIA----DATDDRARVVCVDG-SSDRTPEIAREHGATVIEQ 65
Query: 64 AKGGKARDVKHALSMIDFPYDYLVMLDADYTYPPQYIYDIVKALEE-YDVVIGSRLKGKI 122
G V AL D P ++ D D TYP + I + + E YDVV G RL
Sbjct: 66 EPQGYGVAVAAALDAADTPV--VITTDCDNTYPMERIPAFLARINEGYDVVSGDRLYWGA 123
Query: 123 EDGAMPKVNKLGNWGLSLIATILYGKKISDVCTGMWGFRKYVLDSIEIDANGFDLEANLY 182
+ MP N+LGN + I ++L G+++ D TGM +R V+D+I+ N L A L
Sbjct: 124 D--TMPAFNRLGNAAFAAITSLLVGERVHDTTTGMRAYRAPVIDAIDWTQN-TGLSAELL 180
Query: 183 VEAVKKGFKIGEVPINYRKRPNKPKL 208
+ + + + + E PI Y R KL
Sbjct: 181 IRPLCRNYDVIEEPIGYADRLGDTKL 206
>pir||A71037 hypothetical protein PH1585 - Pyrococcus horikoshii
>gi|3258014|dbj|BAA30697.1| (AP000006) 313aa long
hypothetical protein [Pyrococcus horikoshii]
Length = 313
Score = 88.9 bits (217), Expect = 5e-17
Identities = 71/240 (29%), Positives = 118/240 (48%), Gaps = 22/240 (9%)
Query: 1 MKRVVVLLPAYNEEETIGKVIDEIPVKKLEKEGYKVTVVVANGPSTDRTEEIARNKGA-- 58
+++ +++PAYNEE+TIG V+D + K+ K ++V + S D+T EIA++KG
Sbjct: 88 LRKTYIVMPAYNEEKTIGSVLDSL--LKVFKPN---NIIVVDDGSKDKTREIAKSKGVHV 142
Query: 59 ---IVYNIAKGGKARDVKHALSMIDFPYDYLVMLDADYTYPPQYIYDIVKALEE--YDVV 113
I+ G + +AL + +V DAD + + ++K + E D+
Sbjct: 143 ISHIINRGLGGALGTGIYYALMR---GAEIIVTFDADGQHLLEDALKVIKPVVEGRADLA 199
Query: 114 IGSRLKGKIEDGAMPKVNKLGNWGLSLIATILYGKKISDVCTGMWGFRKYVLDSIEIDAN 173
IGSR KG I G MP V ++GN L+ I + + ++D +G+ F + I+I +
Sbjct: 200 IGSRFKGDI--GQMPLVKRIGNIVLNTITAVFAMRYVTDSQSGLRAFSRACASKIKITCD 257
Query: 174 GFDLEANLYVEAVKKGFKIGEVPINYRKRPNKPKLGNGNPWGAVKTGLKIGWYLVRKRFK 233
G+ + + + VEA + KI EVPI K G V G+KI L+ F+
Sbjct: 258 GYAVSSEIIVEASRGKCKIVEVPIKAVYTEYSMKKGTN-----VMEGIKIAINLLLDIFR 312
>pir||A75176 dolichyl-phosphate mannose synthase related protein PAB1981 -
Pyrococcus abyssi (strain Orsay)
>gi|5457998|emb|CAB49488.1| (AJ248284)
DOLICHYL-PHOSPHATE MANNOSE SYNTHASE RELATED PROTEIN
[Pyrococcus abyssi]
Length = 211
Score = 87.4 bits (213), Expect = 1e-16
Identities = 65/205 (31%), Positives = 105/205 (50%), Gaps = 25/205 (12%)
Query: 3 RVVVLLPAYNEEETIGKVIDEIPVKKLEKEGYKVTVVVANGPSTDRTEEIARNKGAIVY- 61
+V V++PAYNEE+ IGKV+ EIP + V+V + S D T ++A+ G V
Sbjct: 2 KVSVIIPAYNEEKRIGKVLAEIP-------EFVNEVIVVDDGSKDNTADVAKRFGVRVIR 54
Query: 62 ---NIAKGGKARD-VKHALSMIDFPYDYLVMLDADYTYPPQYIYDIVKAL--EEYDVVIG 115
N KG R+ +KHA D +V +DAD + P+ I I+ + + D VIG
Sbjct: 55 LPENRGKGAAMREGIKHAKG------DIIVFMDADGQHDPKEIPKIIAPIIKGDADFVIG 108
Query: 116 SRLKGKIEDGAMPKVNKLGNWGLSLIATILYGKKISDVCTGMWGFRKYVLDSIEIDANGF 175
R+ I+ G P V KL N+ + + +K+ D +G ++ L IE + +
Sbjct: 109 KRV---IKAGKRPLVRKLSNFITTTLIRAKIKQKVDDTQSGFRAIKREFLPDIE--SERY 163
Query: 176 DLEANLYVEAVKKGFKIGEVPINYR 200
++E + ++ KKG +I EVP++ R
Sbjct: 164 EVETEVLIKVAKKGARIVEVPVSTR 188
>gb|AAG19457.1| (AE005038) glycosyl transferase-like; Gtl [Halobacterium sp. NRC-1]
Length = 305
Score = 82.3 bits (200), Expect = 5e-15
Identities = 62/208 (29%), Positives = 98/208 (46%), Gaps = 17/208 (8%)
Query: 2 KRVVVLLPAYNEEETIGKVID---EIPVKKLEKEGYKVTVVVANGPSTDRTEEIARNKGA 58
+ V L+P NE TI VID E+ V V+V +G S D T +A GA
Sbjct: 6 EEVCALVPTRNEAATIADVIDGLFEVGVGH---------VLVVDGNSADDTAAVAAEHGA 56
Query: 59 IVYNIAKGGKARDVKHALSMIDFPYDYLVMLDADYTYPPQYIYDIVKALE--EYDVVIGS 116
V + GK + V+ +S+I+ Y +++LD D T PP ++ L E + V+G
Sbjct: 57 EVVQQSGDGKGQAVREGVSLIEAAY--VLLLDGDGTNPPAQASRLLDPLVAGEAEHVVGD 114
Query: 117 RLKGKIEDGAMPKVNKLGNWGLSLIATILYGKKISDVCTGMWGFRKYVLDSIEIDANGFD 176
R + GAM +N++GN ++ ++G+ D+ +G F D + + A GF
Sbjct: 115 RT-ADMRPGAMSTLNQIGNRLINRAFHRIHGEDYGDILSGYRAFTAESFDRMFLSAEGFG 173
Query: 177 LEANLYVEAVKKGFKIGEVPINYRKRPN 204
+E + VE + VP YR RP+
Sbjct: 174 IETEMAVECSRHNITTRVVPTTYRARPD 201
>pir||T38633 dolichol monophosphate mannose synthase - fission yeast
(Schizosaccharomyces pombe) >gi|2258414|gb|AAC98795.1|
(AF007873) dolichol monophosphate mannose synthase
[Schizosaccharomyces pombe] >gi|2388967|emb|CAB11700.1|
(Z98979) dolichol-phosphate mannosyltransferase
[Schizosaccharomyces pombe]
Length = 236
Score = 80.4 bits (195), Expect = 2e-14
Identities = 64/234 (27%), Positives = 119/234 (50%), Gaps = 22/234 (9%)
Query: 1 MKRVVVLLPAYNEEETIGKVIDEIPVKKLEKEGYKVTVVVANGPSTDRTEEIAR------ 54
M + VLLP YNE + + +I + K ++E +V+ + S D T+E+A+
Sbjct: 1 MSKYSVLLPTYNERKNL-PIITYLIAKTFDQEKLDWEIVIIDDASPDGTQEVAKELQKIY 59
Query: 55 --NKGAIVYNIAKGGKARDVKHALSMIDFPYDYLVMLDADYTYPPQYIYDIVKALEE--Y 110
+K + K G H L D+++++DAD+++ P+Y+ + +K +E Y
Sbjct: 60 GEDKILLKPRSGKLGLGTAYIHGLKFATG--DFVIIMDADFSHHPKYLPEFIKLQKEHNY 117
Query: 111 DVVIGSRLKGKIEDGAMPKVN---KLGNWGLSLIATILYGKKISDVCTGMWGFRKYVLDS 167
D+V+G+R +DG + N K + G +L+A+ + G +SDV ++K VL++
Sbjct: 118 DIVLGTRY---AKDGGVYGWNLKRKFISRGANLLASTVLGTGVSDVTGSFRLYKKPVLET 174
Query: 168 I--EIDANGFDLEANLYVEAVKKGFKIGEVPINYRKR-PNKPKLGNGNPWGAVK 218
+ E+ + G+ + + A + + IGEVPI + R + KLG + G +K
Sbjct: 175 LMSEVTSKGYVFQMEIIARAREHNYTIGEVPIAFVDRLYGESKLGMDDILGYLK 228
>pir||S77381 rfbJ protein - Synechocystis sp. (strain PCC 6803)
>gi|1652563|dbj|BAA17484.1| (D90906) RfbJ protein
[Synechocystis sp.]
Length = 318
Score = 76.9 bits (186), Expect = 2e-13
Identities = 54/223 (24%), Positives = 105/223 (46%), Gaps = 13/223 (5%)
Query: 3 RVVVLLPAYNEEETIGKVIDEIPVKKLEKEGYKVTVVVANGPSTDRTEEIARNKGAIVYN 62
R+ VL+P NE TI +V+ + ++ + V + STD T +A+ GAIV
Sbjct: 10 RLAVLVPCRNEALTITQVVTDF-----RQQLPNAAIYVYDNCSTDDTATVAQQAGAIVRY 64
Query: 63 IAKGGKARDVKHALSMIDFPYDYLVMLDADYTYPPQYIYDIVKAL--EEYDVVIGSRLKG 120
+ GK ++ + D D +++D D TY + + ++ L E+ D+V+G+R
Sbjct: 65 EKQPGKGNVIRRMFA--DIEADIYILVDGDNTYEAEAVGRLIDRLINEQLDMVVGARRSE 122
Query: 121 KIEDGAMPKVNKLGNWGLSLIATILYGKKISDVCTGMWGFRKYVLDSIEIDANGFDLEAN 180
+ A ++ GN L I + +G ++ D+ +G F + + +NGF++E
Sbjct: 123 VKDKEAYRFGHRSGNQLLKGIVELQFGARLDDMLSGYRIFSRRFVKCFPAISNGFEIETE 182
Query: 181 LYVEAVKKGFKIGEVPINYRKRPNKPKLGNGNPWGAVKTGLKI 223
L + ++ E P+ Y+ RP+ G+ + + G ++
Sbjct: 183 LTIHTLELRLPFAEEPVLYQSRPS----GSESKLNTISDGFRV 221
>gi|11498189 dolichol-P-glucose synthetase, putative [Archaeoglobus fulgidus]
>gi|7483291|pir||E69322 dolichol-P-glucose synthetase
homolog - Archaeoglobus fulgidus
>gi|2650038|gb|AAB90655.1| (AE001064) dolichol-P-glucose
synthetase, putative [Archaeoglobus fulgidus]
Length = 581
Score = 76.9 bits (186), Expect = 2e-13
Identities = 53/208 (25%), Positives = 104/208 (49%), Gaps = 14/208 (6%)
Query: 3 RVVVLLPAYNEEETIGKVIDEIPVKKLEKEGYKVTVVVANGPSTDRTEEIARNKGAI--- 59
++ ++LPAYNE + + ++E+ +K EK GY +++A S D T+ IA A
Sbjct: 55 KISIVLPAYNEAKRLRGAVEEV-IKAAEKTGYDFEIIIAEDGSKDGTDRIAAELAASNPR 113
Query: 60 ---VYNIAKGGKARDVKHALSMIDFPYDYLVMLDADYTYPPQYIYDIVKAL--EEYDVVI 114
+++ + G+ R + +A S D +V +D D ++ ++V A+ E YD
Sbjct: 114 IKHLHSDERLGRGRALMNAFSKASG--DVVVYMDVDLATDLSHLKELVDAIIVEGYDFST 171
Query: 115 GSRLKGKIEDGAMPKVNKLGNWGLSLIATILYGKKISDVCTGMWGFRKYVLDSI--EIDA 172
GSRL K P ++ + G + + + G K+ D G FR+ ++ + E+
Sbjct: 172 GSRLM-KESQTDRPAKREIASRGYNFLVRLFLGSKLHDHQCGFKAFRRDLILDLGKEVKD 230
Query: 173 NGFDLEANLYVEAVKKGFKIGEVPINYR 200
N + + + V A K+G+++ E+P+ ++
Sbjct: 231 NHWFWDTEVLVLAQKRGYRVKEIPVRWK 258
>pir||G69047 conserved hypothetical protein MTH136 - Methanobacterium
thermoautotrophicum (strain Delta H)
>gi|2621176|gb|AAB84642.1| (AE000802) dolichyl-phosphate
mannose synthase [Methanobacterium thermoautotrophicum]
Length = 220
Score = 76.1 bits (184), Expect = 4e-13
Identities = 64/220 (29%), Positives = 101/220 (45%), Gaps = 21/220 (9%)
Query: 4 VVVLLPAYNEEETIGKVIDEIPVKKLEKEGYKVTVVVANGPSTDRTEEI-----ARNKGA 58
V V++P YNEE+T+ VI+ L GY+V V + S D T EI + G
Sbjct: 12 VAVVVPVYNEEKTVAGVIES-----LLDRGYRVIAV--DDGSRDSTPEILAGIASERDGL 64
Query: 59 IVY-NIAKGGKARDVKHAL-SMIDFPYDYLVMLDADYTYPPQYIYDIVKAL--EEYDVVI 114
VY ++ G ++ L + +D +V DAD + P I +++ L E DVVI
Sbjct: 65 SVYTHVINRGLGTALRTGLRAAVDEGASCIVTFDADGQHDPDDIEGVIEPLLKGEADVVI 124
Query: 115 GSRLKGKIEDGAMPKVNKLGNWGLSLIATILYGKKISDVCTGMWGFRKYVLDSIEIDANG 174
GSR + MP LGN ++L+ + YG ++SD +G+ F I+I + G
Sbjct: 125 GSR-----DFSEMPLSRSLGNTLMNLLTLLFYGCRVSDSQSGLRAFTARAASVIDIKSRG 179
Query: 175 FDLEANLYVEAVKKGFKIGEVPINYRKRPNKPKLGNGNPW 214
+ + + + E + G ++ EV I P G W
Sbjct: 180 YGVSSEIIGEIHRNGLRMREVTIKTIYTPETISKGPAPQW 219
>pir||G69148 dolichyl-phosphate mannose synthase related protein 1 -
Methanobacterium thermoautotrophicum (strain Delta H)
>gi|2621438|gb|AAB84883.1| (AE000823) dolichyl-phosphate
mannose synthase related protein [Methanobacterium
thermoautotrophicum]
Length = 248
Score = 72.6 bits (175), Expect = 4e-12
Identities = 62/213 (29%), Positives = 99/213 (46%), Gaps = 12/213 (5%)
Query: 3 RVVVLLPAYNEEETIGKVIDEIPVKKLEKEGYKVTVVVANGPSTDRTEEIARNKGAIVYN 62
RVV ++PA+NEE T+ V V+ + G V++ + STDRT + GA V +
Sbjct: 24 RVVTVIPAFNEERTVESV-----VRGALEHG---DVILVDDGSTDRTAALGEEAGARVIS 75
Query: 63 IAKG-GKARDVKHAL-SMIDFPYDYLVMLDADYTYPPQYIYDIVKALEEYDVVIGSRLKG 120
K GK +K + + YD +V +DAD + P I ++ A+ D +IGSR
Sbjct: 76 HPKNLGKGAALKTGIREALGGDYDVIVFMDADGQHDPSLIPELASAVNGGDFIIGSRFIR 135
Query: 121 KIEDGAMPKVNKLGNWGLSLIATILYGKKISDVCTGMWGF-RKYVLDSIEIDANGFDLEA 179
D +MP +L N + I + G +I+D +G +Y +EI + + E+
Sbjct: 136 NNHD-SMPLHRQLSNRITTWILRLATGYRITDSQSGFRAISARYAHLILEIPYDDYVYES 194
Query: 180 NLYVEAVKKGFKIGEVPINYRKRPNKPKLGNGN 212
E + +I EVPI K +G G+
Sbjct: 195 EAICETSRHRLRIAEVPITCTYGDEKSYIGVGD 227
>gb|AAG00234.1|AF283817_1 (AF283817) dolichol phosphate mannose synthase [Schistosoma
mansoni]
Length = 237
Score = 72.2 bits (174), Expect = 5e-12
Identities = 57/209 (27%), Positives = 98/209 (46%), Gaps = 15/209 (7%)
Query: 6 VLLPAYNEEETIGKVIDEIPVKKLEKEGYKVTVVVANGPSTDRTEEIAR--------NKG 57
++LP YNE+E + +I I K + K G+ +++ + S D T E+A+ NK
Sbjct: 6 IILPTYNEKENL-PIITWIIDKVMNKSGFPYELIIVDDNSPDGTGEVAKKLQSILGENKI 64
Query: 58 AIVYNIAKGGKARDVKHALSMIDFPYDYLVMLDADYTYPPQYIYDIVKALE--EYDVVIG 115
+ K G H L D+++++DAD ++ P++I + +K + +YDVV G
Sbjct: 65 ILKPRSGKLGLGSAYLHGLKFAKG--DFIIIMDADLSHHPKFIPEFIKLQKQHDYDVVTG 122
Query: 116 SRLKGKIEDGAMPKVNKLGNWGLSLIATILYGKKISDVCTGMWGFRKYVLDSI--EIDAN 173
+R KL + + IA +L K SD+ ++K VL + +
Sbjct: 123 TRYASNGGVSGWDLKRKLISRTANYIAQVLLRPKASDLTGSFRLYKKAVLQDLVSRCTSR 182
Query: 174 GFDLEANLYVEAVKKGFKIGEVPINYRKR 202
G+ + + V A G+KIGEV I + R
Sbjct: 183 GYVFQMEMIVLASSLGYKIGEVGITFVDR 211
>gb|AAC98796.1| (AF007874) dolichol monophosphate mannose synthase [Caenorhabditis
briggsae]
Length = 242
Score = 71.8 bits (173), Expect = 7e-12
Identities = 54/211 (25%), Positives = 103/211 (48%), Gaps = 21/211 (9%)
Query: 6 VLLPAYNEEETIGKVIDEIPVKKLEK--EGYKVTVVVANGPSTDRTEEIAR--------N 55
++LP YNE+E + I + +EK +G +++ + S D T+++A+ N
Sbjct: 12 IILPTYNEKENL-----PICIWLIEKYLKGISYEIIIVDDASPDGTQDVAKLLEKEYGEN 66
Query: 56 KGAIVYNIAKGGKARDVKHALSMIDFPYDYLVMLDADYTYPPQYIYDIVKALEEY--DVV 113
K I K G H LS ++++++DAD ++ P++I +++ ++Y D+V
Sbjct: 67 KILIKPRAGKLGLGTAYSHGLSFARG--EFIILMDADLSHHPKFIPEMIALQQKYKLDIV 124
Query: 114 IGSRLKGKIEDGAMPKVNKLGNWGLSLIATILYGKKISDVCTGMWGFRKYVLDSI--EID 171
G+R K K + G + +A L +SD+ ++K VL ++ E
Sbjct: 125 TGTRYKNGGGVSGWDLKRKTISKGANFLAQFLLNPGVSDLTGSFRLYKKEVLATLIAESV 184
Query: 172 ANGFDLEANLYVEAVKKGFKIGEVPINYRKR 202
+ G+ + + A K G++IGEVPI++ R
Sbjct: 185 SKGYVFQMEMMFRAKKSGYRIGEVPISFVDR 215
>pir||D69148 dolichyl-phosphate mannose synthase related protein 2 -
Methanobacterium thermoautotrophicum (strain Delta H)
>gi|2621435|gb|AAB84880.1| (AE000823) dolichyl-phosphate
mannose synthase related protein [Methanobacterium
thermoautotrophicum]
Length = 291
Score = 71.8 bits (173), Expect = 7e-12
Identities = 63/202 (31%), Positives = 95/202 (46%), Gaps = 15/202 (7%)
Query: 3 RVVVLLPAYNEEETIGKVIDEIPVKKLEKEGYKVTVVVANGPSTDRTEEIARNKGA-IVY 61
R+V ++PA+NEE IG V+ L E +VV +G S DRT +A GA ++
Sbjct: 2 RIVAVIPAFNEEVAIGSVV------LLTGEHVDEVIVVDDG-SADRTAHVAEMAGARVIR 54
Query: 62 NIAKGGKARDVKHALSMIDFPYDYLVMLDADYTYPPQYIYDIVKAL--EEYDVVIGSR-L 118
+ GK +K D D +V LDAD + P I +V+ + E DVV GSR L
Sbjct: 55 HHRNLGKGAALKTGFEAAD--ADVIVTLDADAQHNPAEIPKLVEPILRGEADVVNGSRYL 112
Query: 119 KGKIEDGAMPKVNKLGNWGLSLIATILYGKKISDVCTGMWGFRKYVLDSIEIDANGFDLE 178
G+ E+ P+ ++G L I G I+D +G F + GF +E
Sbjct: 113 HGRDEN--TPRYRRVGQKILDRATNISTGLDITDTQSGFRAFSSASIPHFRFRDPGFVVE 170
Query: 179 ANLYVEAVKKGFKIGEVPINYR 200
+ + +A + G +I EV + R
Sbjct: 171 SEMLADAAEAGLRIVEVEVGVR 192
>gi|4503363 dolichyl-phosphate mannosyltransferase polypeptide 1; dolichol
monophosphate mannose synthase [Homo sapiens]
>gi|11420524|ref|XP_009467.1| dolichyl-phosphate
mannosyltransferase polypeptide 1 [Homo sapiens]
>gi|3062806|dbj|BAA25646.1| (D86198)
dolichol-phosphate-mannose synthase [Homo sapiens]
>gi|5817251|emb|CAB53749.1| (AL034553) dJ914P20.1
(dolichyl-phosphate mannosyltransferase polypeptide 1,
catalytic subunit) [Homo sapiens]
Length = 260
Score = 69.9 bits (168), Expect = 3e-11
Identities = 56/215 (26%), Positives = 104/215 (48%), Gaps = 12/215 (5%)
Query: 6 VLLPAYNEEETIGKVIDEIPVKKLEKEGYKVTVVVANGPSTDRTEEIARNKGAIVYNIAK 65
VLLP YNE E + ++ + VK + G +++ + S D T ++A I +
Sbjct: 29 VLLPTYNERENLPLIV-WLLVKSFSESGINYEIIIIDDGSPDGTRDVAEQLEKIYGSDRI 87
Query: 66 GGKARDVKHALS------MIDFPYDYLVMLDADYTYPPQYIYDIVKALEE--YDVVIGSR 117
+ R+ K L M +Y++++DAD ++ P++I + ++ +E +D+V G+R
Sbjct: 88 LLRPREKKLGLGTAYIHGMKHATGNYIIIMDADLSHHPKFIPEFIRKQKEGNFDIVSGTR 147
Query: 118 LKGKIEDGAMPKVNKLGNWGLSLIATILYGKKISDVCTGMWGFRKYVLDSI--EIDANGF 175
KG K+ + G + + IL SD+ +RK VL+ + + + G+
Sbjct: 148 YKGNGGVYGWDLKRKIISRGANFLTQILLRPGASDLTGSFRLYRKEVLEKLIEKCVSKGY 207
Query: 176 DLEANLYVEAVKKGFKIGEVPINYRKRP-NKPKLG 209
+ + V A + + IGEVPI++ R + KLG
Sbjct: 208 VFQMEMIVRARQLNYTIGEVPISFVDRVYGESKLG 242
>gb|AAF53817.1| (AE003663) CG10166 gene product [Drosophila melanogaster]
Length = 241
Score = 69.1 bits (166), Expect = 5e-11
Identities = 56/213 (26%), Positives = 103/213 (48%), Gaps = 23/213 (10%)
Query: 6 VLLPAYNEEETIGKVIDEIPVKKLEKEGYKVTVVVANGPSTDRTEEIARNKGAI-----V 60
+L+P YNE++ + +I I VK ++ G + V+V + S D T ++A++ I +
Sbjct: 10 ILMPTYNEKDNLPIIIWLI-VKYMKASGLEYEVIVIDDGSPDGTLDVAKDLQKIYGEDKI 68
Query: 61 YNIAKGGKA-------RDVKHALSMIDFPYDYLVMLDADYTYPPQYIYDIVKALEE--YD 111
+G K +KHA D++V++DAD ++ P++I + +K +E YD
Sbjct: 69 VLRPRGSKLGLGTAYIHGIKHATG------DFIVIIDADLSHHPKFIPEFIKLQQEGNYD 122
Query: 112 VVIGSRLKGKIEDGAMPKVNKLGNWGLSLIATILYGKKISDVCTGMWGFRKYVLDS--IE 169
+V G+R G KL + G + ++ +L SD+ ++K VL+
Sbjct: 123 IVSGTRYAGNGGVFGWDFKRKLISRGANFLSQVLLRPNASDLTGSFRLYKKDVLEKCIAS 182
Query: 170 IDANGFDLEANLYVEAVKKGFKIGEVPINYRKR 202
+ G+ + + V A + G+ I EVPI + R
Sbjct: 183 CVSKGYVFQMEMLVRARQHGYTIAEVPITFVDR 215
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.318 0.141 0.416
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 90844007
Number of Sequences: 2977
Number of extensions: 3935345
Number of successful extensions: 8904
Number of sequences better than 1.0e-10: 26
Number of HSP's better than 0.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 8842
Number of HSP's gapped (non-prelim): 26
length of query: 233
length of database: 189,106,746
effective HSP length: 53
effective length of query: 180
effective length of database: 157,386,935
effective search space: 28329648300
effective search space used: 28329648300
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.6 bits)
S2: 164 (68.3 bits)