BLASTP 2.0.10 [Aug-26-1999]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= PAB1599 (PAB1599) DE:Hypothetical protein
         (148 letters)

Database: ./suso.pep; /banques/blast2/nr.pep
           598,487 sequences; 189,106,746 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

pir||H75096 hypothetical protein PAB1599 - Pyrococcus abyssi (st...   300  7e-81

>pir||H75096 hypothetical protein PAB1599 - Pyrococcus abyssi (strain Orsay)
           >gi|5458589|emb|CAB50077.1| (AJ248286) hypothetical
           protein [Pyrococcus abyssi]
           Length = 148
           
 Score =  300 bits (759), Expect = 7e-81
 Identities = 148/148 (100%), Positives = 148/148 (100%)

Query: 1   MVKRMKSKLVYIDTGALIAFFDKRDKNHKIAVSYFESAILNGVRFVVGRPVLMEFINGAS 60
           MVKRMKSKLVYIDTGALIAFFDKRDKNHKIAVSYFESAILNGVRFVVGRPVLMEFINGAS
Sbjct: 1   MVKRMKSKLVYIDTGALIAFFDKRDKNHKIAVSYFESAILNGVRFVVGRPVLMEFINGAS 60

Query: 61  KVNGKRVAIQLKNLIYSSRYILIENETERDWEKAWEIFEKFDDQDGMDLVDCLSFAIMER 120
           KVNGKRVAIQLKNLIYSSRYILIENETERDWEKAWEIFEKFDDQDGMDLVDCLSFAIMER
Sbjct: 61  KVNGKRVAIQLKNLIYSSRYILIENETERDWEKAWEIFEKFDDQDGMDLVDCLSFAIMER 120

Query: 121 LGIKKAFTFDSDFETYGFIVVPRSQSNY 148
           LGIKKAFTFDSDFETYGFIVVPRSQSNY
Sbjct: 121 LGIKKAFTFDSDFETYGFIVVPRSQSNY 148


  Database: ./suso.pep
    Posted date:  Jul 6, 2001  5:57 PM
  Number of letters in database: 840,471
  Number of sequences in database:  2977
  
  Database: /banques/blast2/nr.pep
    Posted date:  Dec 14, 2000 12:46 PM
  Number of letters in database: 188,266,275
  Number of sequences in database:  595,510
  
Lambda     K      H
   0.324    0.140    0.406 

Gapped
Lambda     K      H
   0.270   0.0470    0.230 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 51371613
Number of Sequences: 2977
Number of extensions: 1941088
Number of successful extensions: 6435
Number of sequences better than 1.0e-10: 1
Number of HSP's better than  0.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 6434
Number of HSP's gapped (non-prelim): 1
length of query: 148
length of database: 189,106,746
effective HSP length: 52
effective length of query: 96
effective length of database: 157,985,422
effective search space: 15166600512
effective search space used: 15166600512
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 40 (21.5 bits)
S2: 161 (67.1 bits)