BLASTP 2.0.10 [Aug-26-1999]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= PAB1626 1073550 1073197 -118 !not a gene!
         (118 letters)

Database: ./suso.pep; /banques/blast2/nr.pep
           598,487 sequences; 189,106,746 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

pir||H71051 hypothetical protein PH1111 - Pyrococcus horikoshii ...   102  1e-21

>pir||H71051 hypothetical protein PH1111 - Pyrococcus horikoshii
           >gi|3257527|dbj|BAA30210.1| (AP000005) 135aa long
           hypothetical protein [Pyrococcus horikoshii]
           Length = 135
           
 Score =  102 bits (253), Expect = 1e-21
 Identities = 52/62 (83%), Positives = 54/62 (86%)

Query: 57  IKPLSVIAIPTLHLFLLLIKYAKALLRASFALLPINVWKKYLTTLPSLTISTKTVSSSGI 116
           +KPLSVIAIPTLH F LLI YAKALLRAS ALLPI VWKKYL T PSLTIST+TVSSSGI
Sbjct: 1   MKPLSVIAIPTLHFFFLLIMYAKALLRASLALLPIRVWKKYLVTFPSLTISTRTVSSSGI 60

Query: 117 TE 118
            E
Sbjct: 61  IE 62


  Database: ./suso.pep
    Posted date:  Jul 6, 2001  5:57 PM
  Number of letters in database: 840,471
  Number of sequences in database:  2977
  
  Database: /banques/blast2/nr.pep
    Posted date:  Dec 14, 2000 12:46 PM
  Number of letters in database: 188,266,275
  Number of sequences in database:  595,510
  
Lambda     K      H
   0.325    0.137    0.392 

Gapped
Lambda     K      H
   0.270   0.0470    0.230 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24993684
Number of Sequences: 2977
Number of extensions: 592971
Number of successful extensions: 1957
Number of sequences better than 1.0e-10: 1
Number of HSP's better than  0.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1955
Number of HSP's gapped (non-prelim): 2
length of query: 118
length of database: 189,106,746
effective HSP length: 53
effective length of query: 65
effective length of database: 157,386,935
effective search space: 10230150775
effective search space used: 10230150775
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 40 (21.6 bits)
S2: 160 (66.7 bits)