BLASTP 2.0.10 [Aug-26-1999]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= PAB1633 (PAB1633) DE:TWITCHING MOBILITY (PILT) RELATED PROTEIN
(PILT)
         (608 letters)

Database: ./suso.pep; /banques/blast2/nr.pep
           598,487 sequences; 189,106,746 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

pir||H75089 twitching mobility (pilt) related protein (pilt) PAB...  1192  0.0
pir||D71053 hypothetical protein PH1123 - Pyrococcus horikoshii ...  1103  0.0
emb|CAC11461.1| (AL445063) conserved hypothetical protein [Therm...   640  0.0
pir||D64491 hypothetical protein homolog MJ1533 - Methanococcus ...   627  e-178
pir||G69130 conserved hypothetical protein MTH246 - Methanobacte...   586  e-166
gi|11499533 conserved hypothetical protein [Archaeoglobus fulgid...   579  e-164
pir||S28724 conserved hypothetical protein (hisI 3' region) - Me...   561  e-159
gb|AAG20653.1| (AE005134) Vng2615c [Halobacterium sp. NRC-1]          555  e-157
pir||E72741 hypothetical protein APE0462 - Aeropyrum pernix (str...   448  e-125
gb|AAK40888.1| Conserved hypothetical protein [Sulfolobus solfat...   429  e-119
emb|CAB57726.1| (Y18930) hypothetical protein [Sulfolobus solfat...   429  e-119
emb|CAA27651.1| (X04021) putative 29K protein [Methanococcus van...   210  5e-53

>pir||H75089 twitching mobility (pilt) related protein (pilt) PAB1633 -
           Pyrococcus abyssi (strain Orsay)
           >gi|5458533|emb|CAB50021.1| (AJ248286) TWITCHING
           MOBILITY (PILT) RELATED PROTEIN (PILT) [Pyrococcus
           abyssi]
           Length = 608
           
 Score = 1192 bits (3051), Expect = 0.0
 Identities = 608/608 (100%), Positives = 608/608 (100%)

Query: 1   MLVGGETMKVIVPDTSVIVDGRLTQYLKRVREKVKVVVPEAVVAEIEHQANEGKAIGHTG 60
           MLVGGETMKVIVPDTSVIVDGRLTQYLKRVREKVKVVVPEAVVAEIEHQANEGKAIGHTG
Sbjct: 1   MLVGGETMKVIVPDTSVIVDGRLTQYLKRVREKVKVVVPEAVVAEIEHQANEGKAIGHTG 60

Query: 61  LEELKKLRELADKGKILLEFYGERPELWQIKRAKAGEIDHMVREVARELNAVLITGDQVQ 120
           LEELKKLRELADKGKILLEFYGERPELWQIKRAKAGEIDHMVREVARELNAVLITGDQVQ
Sbjct: 61  LEELKKLRELADKGKILLEFYGERPELWQIKRAKAGEIDHMVREVARELNAVLITGDQVQ 120

Query: 121 RDIAIAKGIEVIYLESKREPKTRLEDFFDDETMSVHLKAGVRPLAKKGRPGEWKLVPIRD 180
           RDIAIAKGIEVIYLESKREPKTRLEDFFDDETMSVHLKAGVRPLAKKGRPGEWKLVPIRD
Sbjct: 121 RDIAIAKGIEVIYLESKREPKTRLEDFFDDETMSVHLKAGVRPLAKKGRPGEWKLVPIRD 180

Query: 181 KPLDEEELEEIADDIVERARRDPESFIELDEPGATVVQLRNYRIVIAKPPFSDRIEITAV 240
           KPLDEEELEEIADDIVERARRDPESFIELDEPGATVVQLRNYRIVIAKPPFSDRIEITAV
Sbjct: 181 KPLDEEELEEIADDIVERARRDPESFIELDEPGATVVQLRNYRIVIAKPPFSDRIEITAV 240

Query: 241 RPIKKLSIEDYNLSGKLLERLKEKAEGILVAGPPGAGKTTFVQALAEWYASMGKIVKTME 300
           RPIKKLSIEDYNLSGKLLERLKEKAEGILVAGPPGAGKTTFVQALAEWYASMGKIVKTME
Sbjct: 241 RPIKKLSIEDYNLSGKLLERLKEKAEGILVAGPPGAGKTTFVQALAEWYASMGKIVKTME 300

Query: 301 KPRDLQVSEEITQYTALNGSMEKTGDVLLLVRPDYTIFDEMRKTSDFLIYTDLRLAGVGM 360
           KPRDLQVSEEITQYTALNGSMEKTGDVLLLVRPDYTIFDEMRKTSDFLIYTDLRLAGVGM
Sbjct: 301 KPRDLQVSEEITQYTALNGSMEKTGDVLLLVRPDYTIFDEMRKTSDFLIYTDLRLAGVGM 360

Query: 361 VGVVHATKPIDAIQRFIGRVELGMIPQIVDTVIFIKGGKVAKVLTLEYKVKVPTGMKEED 420
           VGVVHATKPIDAIQRFIGRVELGMIPQIVDTVIFIKGGKVAKVLTLEYKVKVPTGMKEED
Sbjct: 361 VGVVHATKPIDAIQRFIGRVELGMIPQIVDTVIFIKGGKVAKVLTLEYKVKVPTGMKEED 420

Query: 421 LARPVIEVRDFETGQLEYEIYTFGEEVSVVPIKKEEKAPALKLAEKRLKQEIQRFLPDVY 480
           LARPVIEVRDFETGQLEYEIYTFGEEVSVVPIKKEEKAPALKLAEKRLKQEIQRFLPDVY
Sbjct: 421 LARPVIEVRDFETGQLEYEIYTFGEEVSVVPIKKEEKAPALKLAEKRLKQEIQRFLPDVY 480

Query: 481 TEVEVVTPHKAVVYADEYDIPAIIGKKGKRIQELEKRLGISIEVKSLSEKQPEVKEKIPV 540
           TEVEVVTPHKAVVYADEYDIPAIIGKKGKRIQELEKRLGISIEVKSLSEKQPEVKEKIPV
Sbjct: 481 TEVEVVTPHKAVVYADEYDIPAIIGKKGKRIQELEKRLGISIEVKSLSEKQPEVKEKIPV 540

Query: 541 EIDEKKKSIVLRVSPDYARKPLRFYAGNEYVFTATPSKKGVVKVSKSSPVGKLLQKYLRE 600
           EIDEKKKSIVLRVSPDYARKPLRFYAGNEYVFTATPSKKGVVKVSKSSPVGKLLQKYLRE
Sbjct: 541 EIDEKKKSIVLRVSPDYARKPLRFYAGNEYVFTATPSKKGVVKVSKSSPVGKLLQKYLRE 600

Query: 601 GFEIWASL 608
           GFEIWASL
Sbjct: 601 GFEIWASL 608


>pir||D71053 hypothetical protein PH1123 - Pyrococcus horikoshii
           >gi|3257539|dbj|BAA30222.1| (AP000005) 605aa long
           hypothetical protein [Pyrococcus horikoshii]
           Length = 605
           
 Score = 1103 bits (2821), Expect = 0.0
 Identities = 552/602 (91%), Positives = 587/602 (96%), Gaps = 1/602 (0%)

Query: 8   MKVIVPDTSVIVDGRLTQYLKRVREKVKVVVPEAVVAEIEHQANEGKAIGHTGLEELKKL 67
           ++VIVPDTSVIVDGRLTQYL+RVREKVK+VVPEAVVAEIEHQANEGKAIGHTGLEELKKL
Sbjct: 4   VRVIVPDTSVIVDGRLTQYLRRVREKVKIVVPEAVVAEIEHQANEGKAIGHTGLEELKKL 63

Query: 68  RELADKGKILLEFYGERPELWQIKRAKAGEIDHMVREVARELNAVLITGDQVQRDIAIAK 127
           RELADKGKILLEFYGERPELWQIKRAKAGEIDHMVREVARELNA LITGDQVQRDIAIAK
Sbjct: 64  RELADKGKILLEFYGERPELWQIKRAKAGEIDHMVREVARELNATLITGDQVQRDIAIAK 123

Query: 128 GIEVIYLESKREPKTRLEDFFDDETMSVHLKAGVRPLAKKGRPGEWKLVPIRDKPLDEEE 187
           GIEVIYLE KREPKTRLEDFFD+ETMSVHLKAGV+PLAKKG+PGEWKLVPIR++PL EEE
Sbjct: 124 GIEVIYLEGKREPKTRLEDFFDEETMSVHLKAGVKPLAKKGKPGEWKLVPIREEPLSEEE 183

Query: 188 LEEIADDIVERARRDPESFIELDEPGATVVQLRNYRIVIAKPPFSDRIEITAVRPIKKLS 247
           LE+IADDIVERA+RDPESFIELDEPGATVVQLRNYR+VIAKPPFSDRIEITAVRPIKKLS
Sbjct: 184 LEDIADDIVERAKRDPESFIELDEPGATVVQLRNYRVVIAKPPFSDRIEITAVRPIKKLS 243

Query: 248 IEDYNLSGKLLERLKEKAEGILVAGPPGAGKTTFVQALAEWYASMGKIVKTMEKPRDLQV 307
           I+DYNLS KLLERLKEKAEGILVAGPPGAGKTTFVQALAEWYASMGKIVKTMEKPRDLQV
Sbjct: 244 IDDYNLSEKLLERLKEKAEGILVAGPPGAGKTTFVQALAEWYASMGKIVKTMEKPRDLQV 303

Query: 308 SEEITQYTALNGSMEKTGDVLLLVRPDYTIFDEMRKTSDFLIYTDLRLAGVGMVGVVHAT 367
            EEITQYTAL+GSMEKTGDVLLLVRPDYTIFDEMRKTSDFLIY DLRLAGVGMVGVVHAT
Sbjct: 304 REEITQYTALDGSMEKTGDVLLLVRPDYTIFDEMRKTSDFLIYADLRLAGVGMVGVVHAT 363

Query: 368 KPIDAIQRFIGRVELGMIPQIVDTVIFIKGGKVAKVLTLEYKVKVPTGMKEEDLARPVIE 427
           KPIDA+QRFIGRVELGMIPQIVDTVIFIKGGKVAKVLTLEYKVKVPTGMKEEDLARPVIE
Sbjct: 364 KPIDAVQRFIGRVELGMIPQIVDTVIFIKGGKVAKVLTLEYKVKVPTGMKEEDLARPVIE 423

Query: 428 VRDFETGQLEYEIYTFGEEVSVVPIKKEEKAPALKLAEKRLKQEIQRFLPDVYTEVEVVT 487
           VRDFETGQLEYEIYTFGEEVSVVPIKKEEKAPALKLAE++LKQEIQ+FLPDVYTEVEVV 
Sbjct: 424 VRDFETGQLEYEIYTFGEEVSVVPIKKEEKAPALKLAERKLKQEIQKFLPDVYTEVEVVN 483

Query: 488 PHKAVVYADEYDIPAIIGKKGKRIQELEKRLGISIEVKSLSEKQ-PEVKEKIPVEIDEKK 546
           PHKAV+YADEYDIP IIG+KGKRIQELEKRLGI+I+VKSL EK+  +V+EKIPVE++EKK
Sbjct: 484 PHKAVIYADEYDIPLIIGRKGKRIQELEKRLGINIDVKSLGEKEVGKVEEKIPVEVEEKK 543

Query: 547 KSIVLRVSPDYARKPLRFYAGNEYVFTATPSKKGVVKVSKSSPVGKLLQKYLREGFEIWA 606
           KSIVLRVSPD+A+KPLRFYAG +YVFTATPSKKGVVKV K+SPVGKLL++Y+ E +EIWA
Sbjct: 544 KSIVLRVSPDFAKKPLRFYAGKDYVFTATPSKKGVVKVGKNSPVGKLLKRYIDENYEIWA 603

Query: 607 SL 608
           SL
Sbjct: 604 SL 605


>emb|CAC11461.1| (AL445063) conserved hypothetical protein [Thermoplasma
           acidophilum]
           Length = 593
           
 Score =  640 bits (1633), Expect = 0.0
 Identities = 328/597 (54%), Positives = 435/597 (71%), Gaps = 8/597 (1%)

Query: 12  VPDTSVIVDGRLTQYLKRVREKVKVVVPEAVVAEIEHQANEGKAIGHTGLEELKKLRELA 71
           VPDTSVIVDGR TQY++  +E   V++PEA+++E+EHQANEG+AIG   LEELKKLR L 
Sbjct: 4   VPDTSVIVDGRFTQYIQD-KEDANVILPEAMLSEVEHQANEGRAIGFAALEELKKLRSLE 62

Query: 72  DKGKILLEFYGERPELWQIKRAKAGEIDHMVREVARELNAVLITGDQVQRDIAIAKGIEV 131
            +GKI +E  GERP  WQIKRAK+GEID M+R VA + +A+L+TGD +QRD+AI KGI V
Sbjct: 63  KEGKITIEIVGERPREWQIKRAKSGEIDEMIRSVALQYDAMLVTGDNIQRDVAIIKGINV 122

Query: 132 IYLESKREPKTRLEDFFDDETMSVHLKAGVRPLAKKGRPGEWKLVPIRDKPLDEEELEEI 191
            YL    +    +E+FF+D TMSVHLKAG  P+ K G+PG  K   + D  L+  +LE I
Sbjct: 123 DYLPPPEKVVKNIEEFFEDTTMSVHLKAGTNPVLKDGKPGSIKYRRL-DYILNRSDLENI 181

Query: 192 ADDIVERARRDPESFIELDEPGATVVQLRNYRIVIAKPPFSDRIEITAVRPIKKLSIEDY 251
           A +IV+R + + +SFIE+D  GATVVQL+N RIVI +PPFSD IEITAVRP+ KL I+ Y
Sbjct: 182 ASNIVKRGKLEADSFIEMDAQGATVVQLKNIRIVITRPPFSDDIEITAVRPVVKLGIDYY 241

Query: 252 NLSGKLLERLKEKAEGILVAGPPGAGKTTFVQALAEWYASMGKIVKTMEKPRDLQVSEEI 311
           +L  K+ ERL+  A GILVAG PGAGK+TFVQALAE++ + GKIVKTME+PRDL VS+EI
Sbjct: 242 DLDDKIKERLESSASGILVAGAPGAGKSTFVQALAEFFNARGKIVKTMERPRDLDVSKEI 301

Query: 312 TQYTALNGSMEKTGDVLLLVRPDYTIFDEMRKTSDFLIYTDLRLAGVGMVGVVHATKPID 371
           TQYT L GSME TGD+LLLVRPDYTIFDEMR T+DF +Y DLRLAGVGMVGVVHAT+ ID
Sbjct: 302 TQYTELEGSMEMTGDILLLVRPDYTIFDEMRVTNDFKVYADLRLAGVGMVGVVHATRAID 361

Query: 372 AIQRFIGRVELGMIPQIVDTVIFIKGGKVAKVLTLEYKVKVPTGMKEEDLARPVIEVRDF 431
           A+QRFIGR+ELG+IPQI+DT+I+I  G+VA+VL+ +Y VK+P GM +EDLARPVI V D 
Sbjct: 362 ALQRFIGRIELGLIPQIIDTIIYINNGQVAQVLSTQYTVKIPYGMTQEDLARPVIVVSDL 421

Query: 432 ETGQLEYEIYTFGEEVSVVPIKKEEKAPALKLAEKRLKQEIQRFLPDVYTEVEVVTPHKA 491
            +G+  YEIY+FGE+V VVP+K+ +++   KLA  R++  I+R +     EV++V   +A
Sbjct: 422 ISGKDLYEIYSFGEQVVVVPVKERKESSISKLAVDRIEDYIKRMIRSDDVEVKMVGDSRA 481

Query: 492 VVYADEYDIPAIIGKKGKRIQELEKRLGISIEVKSLSEKQPEVKEKIPVEIDEKKKSIVL 551
           +V  D   IP +IG+ GK I E+EK+LGI I+V+         ++K  VEI  K    ++
Sbjct: 482 IVRVDPKYIPKLIGRSGKNITEIEKKLGIKIDVEESGSNAE--RQKAGVEIKNK----II 535

Query: 552 RVSPDYARKPLRFYAGNEYVFTATPSKKGVVKVSKSSPVGKLLQKYLREGFEIWASL 608
            +   +  K +R Y G   +  A  S KG+V++  S+ +G  +  +++ G +I+ S+
Sbjct: 536 YIDVGHPNKHVRIYLGEVPILQALSSSKGIVRIKLSTEIGNAIYNHIKNGGDIFYSI 592


>pir||D64491 hypothetical protein homolog MJ1533 - Methanococcus jannaschii
           >gi|1592164|gb|AAB99554.1| (U67594) conserved
           hypothetical protein [Methanococcus jannaschii]
           Length = 642
           
 Score =  627 bits (1599), Expect = e-178
 Identities = 329/616 (53%), Positives = 448/616 (72%), Gaps = 17/616 (2%)

Query: 9   KVIVPDTSVIVDGRLTQYLKRVREK-VKVVVPEAVVAEIEHQANEGKAIGHTGLEELKKL 67
           K +  DT V++DGR+T+ ++R + K   +++PEAVV+E+E+QAN G+ IG+ G+EEL+KL
Sbjct: 27  KKVCVDTCVVIDGRITELIERGKLKDATIIIPEAVVSELEYQANMGREIGYKGIEELRKL 86

Query: 68  RELADKGKILLEFYGERPELWQIKRAKAGEIDHMVREVARELNAVLITGDQVQRDIAIAK 127
            E A +  I +E+YGERP   +I  AK+GEID M+R+VA+E N++L+T D +Q ++A A+
Sbjct: 87  IEKASEHNIKVEYYGERPTREEIFLAKSGEIDAMIRKVAKETNSILLTSDWIQYNLAKAQ 146

Query: 128 GIEVIYLES-KREPKTRLEDFFDDETMSVHLKAGVRPLAKKGRPGEWKLVPIRDKPLDEE 186
           GIE  +LE+ + E +  L+ +FD+ETMSVHLK G  P AKKG+PGE KLVPI DK L +E
Sbjct: 147 GIEAYFLEAAEEEVELVLDKYFDEETMSVHLKEGCLPYAKKGKPGEVKLVPIGDKELTKE 206

Query: 187 ELEEIADDIVERARRDPESFIELDEPGATVVQLRNYRIVIAKPPFSDRIEITAVRPIKKL 246
           E+E+I D+I++ A ++   F E+   GATV+QL N RI IA+PPFS+ +E+TAVRP+ K 
Sbjct: 207 EMEDIIDNIIKYAEQN-NGFFEIQRKGATVIQLGNIRISIARPPFSEALEVTAVRPVVKA 265

Query: 247 SIEDYNLSGKLLERLKEKAEGILVAGPPGAGKTTFVQALAEWYASMGKIVKTMEKPRDLQ 306
           S+EDY LS KL+ERLKE+AEGI V+GPPG+GK+TFV ALAE+Y S GKIVKTME PRDLQ
Sbjct: 266 SLEDYELSDKLMERLKERAEGIFVSGPPGSGKSTFVAALAEFYRSQGKIVKTMESPRDLQ 325

Query: 307 VSEEITQYTALNGSMEKTGDVLLLVRPDYTIFDEMRKTSDFLIYTDLRLAGVGMVGVVHA 366
           VS+EITQY  L G MEKT D+LLLVRPDYTI+DE+RKT DF I+ D+R+AGVGMVGVVHA
Sbjct: 326 VSKEITQYAPLEGDMEKTCDILLLVRPDYTIYDEVRKTRDFEIFADMRMAGVGMVGVVHA 385

Query: 367 TKPIDAIQRFIGRVELGMIPQIVDTVIFIKGGKVAKVLTLEYKVKVPTGMKEEDLARPVI 426
           +KPIDAIQR IGRVELG+IPQ+VDTVIFIK GK+ KV  +++ VKVP GM EEDLARPVI
Sbjct: 386 SKPIDAIQRLIGRVELGVIPQVVDTVIFIKDGKIQKVYEIDFTVKVPYGMVEEDLARPVI 445

Query: 427 EVRDFETGQLEYEIYTFGEEVSVVPIKKE--EKAPALKLAEKRLKQEIQRFLPDVYTEVE 484
           EV+DFETG++EYEIYT+GE+V V+PIK+E  +KAP    AE++L++ +++ LP     + 
Sbjct: 446 EVKDFETGRVEYEIYTYGEQVVVMPIKEEGGKKAPIYGYAEEKLEEILKKLLPRKAKPMV 505

Query: 485 VVTPHKAV-VYADEYDIPAIIGKKGKRIQELEKRLGISIEVKSLSEKQPEVKEKI----- 538
            VT   ++ +   E  I AIIGK GK I +LE  LG+ I VK   +++ +  E+I     
Sbjct: 506 KVTGDNSIDLIVPEKYIGAIIGKGGKEISKLEDMLGLKISVKEKEKEEEKDMERIYRKYE 565

Query: 539 ------PVEIDEKKKSIVLRVSPDYARKPLRFYAGNEYVFTATPSKKGVVKVSKSSPVGK 592
                    I E  K +V+ V  D+A + +R Y   + + T T    G V+++K + VGK
Sbjct: 566 YVNELESTRIYETDKYVVVDVGEDFAGENIRIYIDGKLLTTVTVRNDGTVRINKKTKVGK 625

Query: 593 LLQKYLREGFEIWASL 608
            + + + EG +I+  L
Sbjct: 626 EILEAIDEGRDIYVDL 641


>pir||G69130 conserved hypothetical protein MTH246 - Methanobacterium
           thermoautotrophicum (strain Delta H)
           >gi|2621295|gb|AAB84752.1| (AE000811) twitching mobility
           (PilT) related protein [Methanobacterium
           thermoautotrophicum]
           Length = 610
           
 Score =  586 bits (1494), Expect = e-166
 Identities = 304/604 (50%), Positives = 424/604 (69%), Gaps = 10/604 (1%)

Query: 11  IVPDTSVIVDGRLTQYLKRVREK-VKVVVPEAVVAEIEHQANEGKAIGHTGLEELKKLRE 69
           IVPDTSVIVDGR+T  ++    +  +V+VPEAVV+E+E+QAN G+  G  GLEELK L++
Sbjct: 3   IVPDTSVIVDGRITGIVQEDEFRGSEVIVPEAVVSELEYQANRGRETGFNGLEELKNLQK 62

Query: 70  LADKGKILLEFYGERPELWQIKRAKAGEIDHMVREVARELNAVLITGDQVQRDIAIAKGI 129
           L  +  I + F G RP + +I  ++ GEID M+R  ARE +A+LIT D+VQ ++  A+G+
Sbjct: 63  LHKENIISMIFVGRRPTVDEISLSRGGEIDAMIRSTAREYDALLITSDRVQAEVGKAQGL 122

Query: 130 EVIYLESKREPKTRLE--DFFDDETMSVHLKAGVRPLAKKGRPGEWKLVPIRDKPLDEEE 187
           +V Y++ +      LE   +FD+ TMSVHLK  V P+AKKGRPGE +LV I  +PL   +
Sbjct: 123 DVFYIKPEVLEYEELEISKYFDENTMSVHLKENVVPMAKKGRPGEIQLVEIGKRPLKHSD 182

Query: 188 LEEIADDIVERARRDPESFIELDEPGATVVQLRNYRIVIAKPPFSDRIEITAVRPIKKLS 247
           +  +A +IVERA+ D +SFIE++  GATVVQ R YRI IA+PPFS+  EITAVRP+ ++S
Sbjct: 183 ISRMAREIVERAKSDFKSFIEIEMEGATVVQFREYRISIARPPFSEAFEITAVRPVARVS 242

Query: 248 IEDYNLSGKLLERLKEKAEGILVAGPPGAGKTTFVQALAEWYA-SMGKIVKTMEKPRDLQ 306
           +EDY LS +L+ERL++ A+G+L+AG PGAGK+TF QA+AE+Y+  M  +VKTME PRDLQ
Sbjct: 243 LEDYRLSDRLVERLRDTAKGVLIAGSPGAGKSTFAQAVAEFYSRDMKAVVKTMESPRDLQ 302

Query: 307 VSEEITQYTALNGSMEKTGDVLLLVRPDYTIFDEMRKTSDFLIYTDLRLAGVGMVGVVHA 366
           V +EITQY  +   M+KT D+LLLVRPDYTI+DE+RKT DF I+ D+RLAGVGMVGVVHA
Sbjct: 303 VGDEITQYAPIERDMQKTADILLLVRPDYTIYDELRKTRDFRIFADMRLAGVGMVGVVHA 362

Query: 367 TKPIDAIQRFIGRVELGMIPQIVDTVIFIKGGKVAKVLTLEYKVKVPTGMKEEDLARPVI 426
           T+PIDAIQR +GRVELG+IP +VDT IFI+ G+V  V  +   VKVPTGM+E DLARPVI
Sbjct: 363 TRPIDAIQRILGRVELGVIPSVVDTTIFIEDGEVKAVYDVSLTVKVPTGMQEADLARPVI 422

Query: 427 EVRDFETGQLEYEIYTFGEEVSVVPIKKE----EKAPALKLAEKRLKQEIQRFLPDVYTE 482
           E+RD E+G+L +EIYT+GE+  V+ + K      K  A ++AE+ +++E +R +P     
Sbjct: 423 EIRDLESGELMHEIYTYGEQTIVMDVSKAAPSGRKPSAHRIAEREIEREFRRRIPGARVR 482

Query: 483 VEVVTPHKAVVYADEYDIPAIIGKKGKRIQELEKRLGISIEVKSLSEKQPEVKEKIPVEI 542
           VE+ +  +A V+ DE  IP +IGKKGK I+E+E  +GISI V+ L E++ E   ++PVE+
Sbjct: 483 VELESDERARVWIDEKYIPQVIGKKGKTIEEIENSIGISIGVEPLEEREIEETLEVPVEL 542

Query: 543 DEKKKSIVLRVSPDYARKPLRFYAGNEYVFTATPSKKGVVKVSKSSPVGKLLQKYLREGF 602
                 +VL    D           +EY+FTAT  KKG +K+ +   +  ++ + ++   
Sbjct: 543 --AGNYVVLNFGKDAVGVSFDILVDDEYLFTATVGKKGTIKLRRDIELADIIMEAVKNSI 600

Query: 603 EIWA 606
            + A
Sbjct: 601 PVRA 604


>gi|11499533 conserved hypothetical protein [Archaeoglobus fulgidus]
           >gi|7483185|pir||F69493 conserved hypothetical protein
           AF1951 - Archaeoglobus fulgidus
           >gi|2648590|gb|AAB89303.1| (AE000968) conserved
           hypothetical protein [Archaeoglobus fulgidus]
           Length = 606
           
 Score =  579 bits (1476), Expect = e-164
 Identities = 313/604 (51%), Positives = 424/604 (69%), Gaps = 20/604 (3%)

Query: 4   GGETMKVIVPDTSVIVDGRLTQYLKRVREKVKVVVPEAVVAEIEHQANEGKAIGHTGLEE 63
           G + MK +V DTSV++ GR+T+ L+    K  ++VPEAV+AE+E QAN GK  G  GL E
Sbjct: 14  GWKEMKYVV-DTSVVISGRVTEMLESGEIKGTIIVPEAVMAELEAQANFGKMTGFQGLSE 72

Query: 64  LKKLRELA-DKGKILLEFYGERPELWQIKRAKAGEIDHMVREVARELNAVLITGDQVQRD 122
           ++KL +LA DKG  ++ F GERP+L  I+ AK GEID+++REVA E +AVL+T D+VQ  
Sbjct: 73  IEKLTKLAKDKGFEVI-FAGERPKLEHIRLAKGGEIDNLIREVAAEFDAVLVTSDRVQHL 131

Query: 123 IAIAKGIEVIYLESK--REPKTRLEDFFDDETMSVHLKAGVRPLAKKGRPGEWKLVPIRD 180
           +A AKGIE IY+  +  R   TR+  FF  +T SVHL+ GV P AK+GR G+ KLV + D
Sbjct: 132 VARAKGIETIYVRPRVVRPENTRIMSFFTPDTASVHLREGVPPYAKRGRIGDLKLVKLDD 191

Query: 181 KPLDEEELEEIADDIVERARRDPESFIELDEPGATVVQLRNYRIVIAKPPFSDRIEITAV 240
           +P+  EEL EIA++I+E AR+D +S IE++  GATVVQLR  RI IA+ PF+DR+EITAV
Sbjct: 192 RPMSYEELNEIANEILEAARQDEDSSIEIERRGATVVQLRELRIAIAERPFADRMEITAV 251

Query: 241 RPIKKLSIEDYNLSGKLLERLKEKAEGILVAGPPGAGKTTFVQALAEWYASMGKIVKTME 300
           RPI ++SI++Y +S +L  R+ E+  GIL++GPPGAGK+TF  ++A +    G IVKTME
Sbjct: 252 RPIAQVSIDEYGVSEELKRRIVERQRGILISGPPGAGKSTFAASVANFLLENGYIVKTME 311

Query: 301 KPRDLQVSEEITQYTALNGSMEKTGDVLLLVRPDYTIFDEMRKTSDFLIYTDLRLAGVGM 360
            PRDL V +EITQY  L G M  T D+LLLVRPDYTI+DE+R+TSDF ++ D+RLAGVGM
Sbjct: 312 SPRDLMVRDEITQYAPLEGDMSLTSDILLLVRPDYTIYDELRRTSDFQVFADMRLAGVGM 371

Query: 361 VGVVHATKPIDAIQRFIGRVELGMIPQIVDTVIFIKGGKVAKVLTLEYKVKVPTGMKEED 420
           +GV HAT+ +DAIQR IGRVELGMIPQ+VDTV+FI  G++ KV  L + VKVPTGM E D
Sbjct: 372 IGVTHATRAVDAIQRMIGRVELGMIPQVVDTVVFIDAGRIVKVYELSFTVKVPTGMTEAD 431

Query: 421 LARPVIEVRDFETGQLEYEIYTFGEEVSVVPIKKEEKAPALKLAEKRLKQEIQRFLPDVY 480
           LARPVIEVRDFET  LEYEIYT+GE+V V+PI+ +E   A       L+++I +++ D  
Sbjct: 432 LARPVIEVRDFETKNLEYEIYTYGEQVVVMPIETDENLKA------ALEEKISKYVDDF- 484

Query: 481 TEVEVVTPHKAVVYADEYDIPAIIGKKGKRIQELEKRLGISIEVKSLSEKQPEVKEKIPV 540
            EVE+V   KAV+   E  IP +IG+KG+RI+ +E    ISI+V        EV+E++  
Sbjct: 485 -EVEMV-GRKAVIKVPEKHIPTLIGRKGRRIKNIEDEFKISIDV-----IPKEVEEEVEA 537

Query: 541 EIDEKKKSIVLRVSPDYARKPLRFYAGNEYVFTATPSKKGVVKVSKSSPVGKLLQKYLRE 600
            ++E  K  V+  +     + +  YAG+EY+FTA  S+KG +++ K    GK L+  L +
Sbjct: 538 SVEESGKHYVIH-AKGLEGRTVDVYAGDEYLFTALVSRKGWIRIRKDKEGGKSLRLALAK 596

Query: 601 GFEI 604
              I
Sbjct: 597 NLPI 600


>pir||S28724 conserved hypothetical protein (hisI 3' region) - Methanococcus
           vannielii >gi|44719|emb|CAA27650.1| (X04021)
           hypothetical protein [Methanococcus vannielii]
           Length = 634
           
 Score =  561 bits (1430), Expect = e-159
 Identities = 296/612 (48%), Positives = 426/612 (69%), Gaps = 16/612 (2%)

Query: 11  IVPDTSVIVDGRLTQYLKR-VREKVKVVVPEAVVAEIEHQANEGKAIGHTGLEELKKLRE 69
           I  DT VI+DGR+T+++++ + E  K++VPEAV++E+E QAN+G+ IG+ G+EELK L +
Sbjct: 25  ITVDTCVIIDGRITEFIEKGLIENCKIIVPEAVISELEAQANKGREIGYFGIEELKNLID 84

Query: 70  LADKGKILLEFYGERPELWQIKRAKAGEIDHMVREVARELNAVLITGDQVQRDIAIAKGI 129
           ++ +  I +E+YGERP + ++  A+ GEID ++R+VARE  ++L T D++Q ++A+A+GI
Sbjct: 85  ISKEKGIEIEYYGERPSIDEVSLARGGEIDAIIRKVARETKSILFTSDKIQYNLAVAQGI 144

Query: 130 EVIYLES-KREPKTRLEDFFDDETMSVHLKAGVRPLAKKGRPGEWKLVPIRDKPLDEEEL 188
              +L+  ++     ++ +FD+ T SVHLK    P  K+G+PG  +L+P   + L + +L
Sbjct: 145 LAKFLKVVEKRVDLFIKKYFDEITSSVHLKEDCIPYVKRGKPGNVRLIPYIPETLTKNDL 204

Query: 189 EEIADDIVERARRDPESFIELDEPGATVVQLRNYRIVIAKPPFSDRIEITAVRPIKKLSI 248
           + + D+I++   ++    IE++  GATV+QL N RI I +PPFS+ +EITAVRPI K+S+
Sbjct: 205 KVLIDNILKYTEQN-NGLIEIERFGATVIQLGNLRISITRPPFSEALEITAVRPITKVSL 263

Query: 249 EDYNLSGKLLERLKEKAEGILVAGPPGAGKTTFVQALAEWYASMGKIVKTMEKPRDLQVS 308
           EDYNLS  L ERL + AEG+ V+G PG+GK+TFV ALAE + +MGKIVKTME PRDLQV 
Sbjct: 264 EDYNLSEDLKERL-DNAEGVFVSGAPGSGKSTFVAALAERFKNMGKIVKTMESPRDLQVG 322

Query: 309 EEITQYTALNGSMEKTGDVLLLVRPDYTIFDEMRKTSDFLIYTDLRLAGVGMVGVVHATK 368
            EITQY  L GSMEKT D+LLLVRPDYTI+DE+RKT DF I+ D+R+AGVGMVGVVHA+K
Sbjct: 323 NEITQYAPLEGSMEKTCDILLLVRPDYTIYDEVRKTKDFEIFADMRMAGVGMVGVVHASK 382

Query: 369 PIDAIQRFIGRVELGMIPQIVDTVIFIKGGKVAKVLTLEYKVKVPTGMKEEDLARPVIEV 428
           PID+IQR IGRVELG+IPQIVDTV+FI+ GK+ KV  +E+ VKVP GMKE DLARPVIEV
Sbjct: 383 PIDSIQRLIGRVELGIIPQIVDTVVFIEKGKIGKVYDVEFNVKVPHGMKEADLARPVIEV 442

Query: 429 RDFETGQLEYEIYTFGEEVSVVPIKK--EEKAPALKLAEKRLKQEIQRFLP-DVYTEVEV 485
            DF T   EYEIYT+GE+V V+PI++   +K P LK AE+++ + +++ LP     E++V
Sbjct: 443 VDFLTRSPEYEIYTYGEQVVVMPIRETATKKGPVLKYAEEKISEILKKHLPKKSKPEIKV 502

Query: 486 VTPHKAVVYADEYDIPAIIGKKGKRIQELEKRLGISIEVKSLSE---------KQPEVKE 536
           +      V   E  IP+IIGK GK I ++E+  G+ I V+  +E             + +
Sbjct: 503 INNDTVEVKVLEKFIPSIIGKGGKEISKIEELTGLRISVREKTEFEEIDKIGGSYEFIND 562

Query: 537 KIPVEIDEKKKSIVLRVSPDYARKPLRFYAGNEYVFTATPSKKGVVKVSKSSPVGKLLQK 596
               ++ E  K IV+ V  D+    ++ Y   +YV TAT S  G V +SK + +GK L+ 
Sbjct: 563 YETTKLTETGKHIVVEVGEDFIGANIKVYVEGQYVCTATVSSSGNVNISKKTVIGKELEN 622

Query: 597 YLREGFEIWASL 608
            +R+G +I+  +
Sbjct: 623 AMRKGKDIYVEI 634


>gb|AAG20653.1| (AE005134) Vng2615c [Halobacterium sp. NRC-1]
           Length = 619
           
 Score =  555 bits (1416), Expect = e-157
 Identities = 298/604 (49%), Positives = 410/604 (67%), Gaps = 19/604 (3%)

Query: 11  IVPDTSVIVDGRLTQYLKR-VREKVKVVVPEAVVAEIEHQANEGKAIGHTGLEELKKLRE 69
           +VPDTSV+VDGR+++ ++    E   V VPEAVV E+E QAN G+  G   LEEL++L E
Sbjct: 3   VVPDTSVVVDGRISRGVEDGTYEGATVYVPEAVVGEVEAQANGGRQTGWDALEELQRLVE 62

Query: 70  LADKGKILLEFYGERPELWQIKRAKAGEIDHMVREVARELNAVLITGDQVQRDIAIAKGI 129
           LAD G I +E+ GER +   IKRA AG ID ++R+VA   +A  +T D VQ ++A  KGI
Sbjct: 63  LADDGAITVEYVGERADEDDIKRAAAGAIDAIIRDVAAAHDATFVTSDIVQAEVAEGKGI 122

Query: 130 EVIYLESKREPKTR---LEDFFDDETMSVHLKAGVRPLAKKGRPGEWKLVPIRDKPLDEE 186
           +V +LE   EP      +E++ D++TMS+HLKAG+ P AK+G  GE +   I +  LDE 
Sbjct: 123 DVEFLEPL-EPDFEALAIEEYLDEDTMSLHLKAGMVPKAKRGDVGEIEYQAIGEDALDES 181

Query: 187 ELEEIADDIVERARRDPESFIELDEPGATVVQLRNYRIVIAKPPFSDRIEITAVRPIKKL 246
            + E A +IV  A+R  ++FIEL E G T+ Q+R+ RI I++PPFS+R+EITAVRPI K 
Sbjct: 182 LVREYATEIVSTAKRADDAFIELSEDGMTIAQVRDLRIAISEPPFSERVEITAVRPIVKT 241

Query: 247 SIEDYNLSGKLLERLKEKAEGILVAGPPGAGKTTFVQALAEWYASMGKIVKTMEKPRDLQ 306
           +++DY  +  L ERL E+  G+L+AG PGAGK+TF QA+AE+ A  G +VKTMEKPRDLQ
Sbjct: 242 TMDDYTQADALRERLLERDRGVLIAGAPGAGKSTFAQAVAEFLADAGNVVKTMEKPRDLQ 301

Query: 307 VSEEITQYTALNGSMEKTGDVLLLVRPDYTIFDEMRKTSDFLIYTDLRLAGVGMVGVVHA 366
           + EE+TQYTAL+GSMEKT D LL+VRPDYTI+DE+RKT DF +++D+RLAGVGMVGVVHA
Sbjct: 302 LDEEVTQYTALSGSMEKTADSLLMVRPDYTIYDEVRKTDDFEVFSDMRLAGVGMVGVVHA 361

Query: 367 TKPIDAIQRFIGRVELGMIPQIVDTVIFIKGGKVAKVLTLEYKVKVPTGMKEEDLARPVI 426
           T+PIDA+QR +GRVELGMIPQIVDTV++I+ G V  V  +  +VKVP G+ EEDLARPVI
Sbjct: 362 TRPIDALQRLVGRVELGMIPQIVDTVVYIEAGNVETVYDVTTEVKVPEGLMEEDLARPVI 421

Query: 427 EVRDFETGQLEYEIYTFGEEVSVVPIKKEEKAPALKLAEKRLKQEIQRFLPDVYTE---V 483
           +VRDFET    YE+YTF  +V  VP+  E         +K  KQE++R +     +   V
Sbjct: 422 QVRDFETNVPAYELYTFNRQVVTVPLDGESGGAGESGVDKLAKQEVEREIQAATRDRVAV 481

Query: 484 EVVTPHKAVVYADEYDIPAIIGKKGKRIQELEKRLGISIEVKSLSEKQPEVKEKIPVEID 543
           ++  P+ AVVY  + DI  +IGK G RI ++E RLGI I+V++L E+  E       + D
Sbjct: 482 DIRGPNDAVVYVSDDDISHVIGKGGGRIADIENRLGIDIDVRTLDERPTESAADPDSDTD 541

Query: 544 EKK-----------KSIVLRVSPDYARKPLRFYAGNEYVFTATPSKKGVVKVSKSSPVGK 592
           + +           + I++ +  D A + +   A  EY+FTAT  + G +KVS+ S + +
Sbjct: 542 DAQAGEIVTPEITSRHIIVPMGDDRAGETVEVQADGEYLFTATVGRGGDIKVSRGSTIAE 601

Query: 593 LLQK 596
            L++
Sbjct: 602 ELER 605


>pir||E72741 hypothetical protein APE0462 - Aeropyrum pernix (strain K1)
           >gi|5104109|dbj|BAA79425.1| (AP000059) 513aa long
           hypothetical protein [Aeropyrum pernix]
           Length = 513
           
 Score =  448 bits (1141), Expect = e-125
 Identities = 230/480 (47%), Positives = 319/480 (65%), Gaps = 12/480 (2%)

Query: 4   GGETMKVIVPDTSVIVDGRLTQYLKRVREKVKVVVPEAVVAEIEHQANEGKAIGHTGLEE 63
           GGE   V + D   +VDG   + +     + +V++  A+V  +  +A  G++ G+ GL E
Sbjct: 6   GGE---VYLLDLDSVVDGSALRMISSGGLRGRVLIHSALVDYLYSEAKRGRSAGYAGLAE 62

Query: 64  LKKLRELADKGKILLEFYGERPELWQIKRAKAGEIDHMVREVARELNAVLITGDQVQRDI 123
           L +L + A  G + +    +     +++    GE+  ++R  A  + A L+T D VQ   
Sbjct: 63  LSRLMD-AGVGDVEIVVVEDDA---RVQPRDEGELKSVLRRYALRVGATLVTSDPVQARA 118

Query: 124 AIAKGIEVIYLESKREPKTRLEDFFDDETMSVHLKAGVRPLAKKGRPGEWKLVPIRDKPL 183
           A A G+ V++    R  + R+E+FFD  TMSVHLK GV PLAK G+PG W  V + DKPL
Sbjct: 119 ARALGVSVLFTGRSRTGRIRIEEFFDGRTMSVHLKEGVPPLAKVGKPGSWMFVSLSDKPL 178

Query: 184 DEEELEEIADDIVERARRDPESFIELDEPGATVVQLRNYRIVIAKPPFSDRIEITAVRPI 243
              E+EEIA +I+E +  + E FIE+D  G+T+VQL++YRIVI +PP SD  E+TAV+P+
Sbjct: 179 TRAEIEEIAREIIEASALEEEGFIEIDRSGSTIVQLKDYRIVITRPPLSDGWEVTAVKPV 238

Query: 244 KKLSIEDYNLSGKLLERLKEKAEGILVAGPPGAGKTTFVQALAEWYASMGKIVKTMEKPR 303
            KL +EDY+L  KL  RL E+AEGIL+AG PG GKTTF QALA +YA  GK+VKT+E PR
Sbjct: 239 AKLRLEDYSLPEKLYNRLLERAEGILIAGAPGMGKTTFAQALATFYAEQGKVVKTIESPR 298

Query: 304 DLQVSEEITQYTALNGSMEKTGDVLLLVRPDYTIFDEMRKTSDFLIYTDLRLAGVGMVGV 363
           D+++   +TQY+     + +  D+LLL RPDYT++DE+R   DF +Y DLRLAG+GM+GV
Sbjct: 299 DMRLPPNVTQYSKNYADLGELHDILLLSRPDYTVYDELRSDEDFQLYVDLRLAGIGMIGV 358

Query: 364 VHATKPIDAIQRFIGRVELGMIPQIVDTVIFIKGGKVAKVLTLEYKVKVPTGMKEEDLAR 423
           VHAT PIDA+QRF+ RVELGMIP I+DTVIFI  G+V+KV  L   VK+PTG++E +L+R
Sbjct: 359 VHATTPIDAVQRFLRRVELGMIPSIIDTVIFIDSGEVSKVYELSITVKLPTGLREAELSR 418

Query: 424 PVIEVRDFETGQLEYEIYTFGEEVSVVPIKKEEKAPALKLAEKRLKQEIQRFLPDVYTEV 483
           PV+EVRDF TG+LEYEIYTFGE+  VVP+++          E  +   I++ LPD   EV
Sbjct: 419 PVVEVRDFITGELEYEIYTFGEQTMVVPVRERRGR-----GEAAILGAIRKLLPDAEVEV 473


>gb|AAK40888.1| Conserved hypothetical protein [Sulfolobus solfataricus]
           Length = 510
           
 Score =  429 bits (1091), Expect = e-119
 Identities = 219/523 (41%), Positives = 333/523 (62%), Gaps = 16/523 (3%)

Query: 3   VGGETMKVIVPDTSVIVDGRLTQYLKRVREKVKVVVPEAVVAEIEHQANEGKAIGHTGLE 62
           +G   +  ++ D S ++ G +++YL++      +++ ++++AE+E ++N+G       L+
Sbjct: 1   MGIRILNDLMLDKSALLFG-VSKYLEKGIITGNILIHKSLLAELEKESNDGLVSAEIALD 59

Query: 63  ELKKLRELADKGKILLEFYGERPELWQIKRAKAGEIDHMVREVARELNAVLITGDQVQRD 122
           E+KKL+++ ++  +  E  GE         +K GE + + RE   E   +++T D+ Q+ 
Sbjct: 60  EVKKLKDITERILVNFEIVGEN--------SKKGEANELSREYCLEKGCIMVTADETQKK 111

Query: 123 IAIAKGIEVIYLESKREPKTRLEDFFDDETMSVHLKAGVRPLAKKGRPGEWKLVPIRDKP 182
           I    GI+  +L+   E     E FFDDETMS+H+K    P AKKG+PG WK V + +KP
Sbjct: 112 ICDVMGIQYSFLQPL-EQSLSFESFFDDETMSLHIKEDTVPRAKKGKPGNWKFVNLSNKP 170

Query: 183 LDEEELEEIADDIVERARRDPESFIELDEPGATVVQLRNYRIVIAKPPFSDRIEITAVRP 242
           +   +++ IA++I+   R    SFIE++  G+ ++QL NYR+VI +PP SD  EIT  RP
Sbjct: 171 MLSVDVKRIANEIINGVRFIKGSFIEIERKGSLIIQLGNYRVVITRPPLSDGWEITITRP 230

Query: 243 IKKLSIEDYNLSGKLLERLKEKAEGILVAGPPGAGKTTFVQALAEWYASMGKIVKTMEKP 302
           + +  +EDY L  +L++RL+E+AEGI++AG PG GKTTF QAL+E+Y  +GKIVKT+E P
Sbjct: 231 VVRKRLEDYGLDERLIKRLEERAEGIIIAGAPGMGKTTFAQALSEYYMRLGKIVKTIESP 290

Query: 303 RDLQVSEEITQYTALNGSMEKTGDVLLLVRPDYTIFDEMRKTSDFLIYTDLRLAGVGMVG 362
           RD+ +  EITQY+     + +  D+LLL RPDYT++DEMR   DF +Y DLRLAG+GMVG
Sbjct: 291 RDMHLPPEITQYSKNYAEIGELHDILLLSRPDYTVYDEMRNDEDFKLYIDLRLAGIGMVG 350

Query: 363 VVHATKPIDAIQRFIGRVELGMIPQIVDTVIFIKGGKVAKVLTLEYKVKVPTGMKEEDLA 422
           VVHAT PIDAI RF+ RV++G IP I+DT+IFI  G V+KV TLE  VKVP G+KE DLA
Sbjct: 351 VVHATSPIDAIHRFVNRVDIGTIPNILDTIIFINSGNVSKVYTLEITVKVPAGLKEADLA 410

Query: 423 RPVIEVRDFETGQLEYEIYTFGEEVSVVPIKKEEKAPALKLAEKRLKQEIQRFLPDVYTE 482
           RPV+E++D  TG  EYEIY FGE+  +VP+    +   L   E ++ + +   +P    +
Sbjct: 411 RPVVEIKDLVTGNTEYEIYVFGEQTMIVPV---NRGITLNNMEFKISKIVNNIIPKATVK 467

Query: 483 VEVVTPHKAVVYADEYDIPAIIGKKGKRIQELEKRLGISIEVK 525
            E     + V+   + +I     K  +R++ LEK+  I I++K
Sbjct: 468 YE---DGEYVIVIPKEEIGKYNRKLVQRLKRLEKKNNIKIKIK 507


>emb|CAB57726.1| (Y18930) hypothetical protein [Sulfolobus solfataricus]
           Length = 510
           
 Score =  429 bits (1091), Expect = e-119
 Identities = 219/523 (41%), Positives = 333/523 (62%), Gaps = 16/523 (3%)

Query: 3   VGGETMKVIVPDTSVIVDGRLTQYLKRVREKVKVVVPEAVVAEIEHQANEGKAIGHTGLE 62
           +G   +  ++ D S ++ G +++YL++      +++ ++++AE+E ++N+G       L+
Sbjct: 1   MGIRILNDLMLDKSALLFG-VSKYLEKGIITGNILIHKSLLAELEKESNDGLVSAEIALD 59

Query: 63  ELKKLRELADKGKILLEFYGERPELWQIKRAKAGEIDHMVREVARELNAVLITGDQVQRD 122
           E+KKL+++ ++  +  E  GE         +K GE + + RE   E   +++T D+ Q+ 
Sbjct: 60  EVKKLKDITERILVNFEIVGEN--------SKKGEANELSREYCLEKGCIMVTADETQKK 111

Query: 123 IAIAKGIEVIYLESKREPKTRLEDFFDDETMSVHLKAGVRPLAKKGRPGEWKLVPIRDKP 182
           I    GI+  +L+   E     E FFDDETMS+H+K    P AKKG+PG WK V + +KP
Sbjct: 112 ICDVMGIQYSFLQPL-EQSLSFESFFDDETMSLHIKEDTVPRAKKGKPGNWKFVNLSNKP 170

Query: 183 LDEEELEEIADDIVERARRDPESFIELDEPGATVVQLRNYRIVIAKPPFSDRIEITAVRP 242
           +   +++ IA++I+   R    SFIE++  G+ ++QL NYR+VI +PP SD  EIT  RP
Sbjct: 171 MLSVDVKRIANEIINGVRFIKGSFIEIERKGSLIIQLGNYRVVITRPPLSDGWEITITRP 230

Query: 243 IKKLSIEDYNLSGKLLERLKEKAEGILVAGPPGAGKTTFVQALAEWYASMGKIVKTMEKP 302
           + +  +EDY L  +L++RL+E+AEGI++AG PG GKTTF QAL+E+Y  +GKIVKT+E P
Sbjct: 231 VVRKRLEDYGLDERLIKRLEERAEGIIIAGAPGMGKTTFAQALSEYYMRLGKIVKTIESP 290

Query: 303 RDLQVSEEITQYTALNGSMEKTGDVLLLVRPDYTIFDEMRKTSDFLIYTDLRLAGVGMVG 362
           RD+ +  EITQY+     + +  D+LLL RPDYT++DEMR   DF +Y DLRLAG+GMVG
Sbjct: 291 RDMHLPPEITQYSKNYAEIGELHDILLLSRPDYTVYDEMRNDEDFKLYIDLRLAGIGMVG 350

Query: 363 VVHATKPIDAIQRFIGRVELGMIPQIVDTVIFIKGGKVAKVLTLEYKVKVPTGMKEEDLA 422
           VVHAT PIDAI RF+ RV++G IP I+DT+IFI  G V+KV TLE  VKVP G+KE DLA
Sbjct: 351 VVHATSPIDAIHRFVNRVDIGTIPNILDTIIFINSGNVSKVYTLEITVKVPAGLKEADLA 410

Query: 423 RPVIEVRDFETGQLEYEIYTFGEEVSVVPIKKEEKAPALKLAEKRLKQEIQRFLPDVYTE 482
           RPV+E++D  TG  EYEIY FGE+  +VP+    +   L   E ++ + +   +P    +
Sbjct: 411 RPVVEIKDLVTGNTEYEIYVFGEQTMIVPV---NRGITLNNMEFKISKIVNNIIPKATVK 467

Query: 483 VEVVTPHKAVVYADEYDIPAIIGKKGKRIQELEKRLGISIEVK 525
            E     + V+   + +I     K  +R++ LEK+  I I++K
Sbjct: 468 YE---DGEYVIVIPKEEIGKYNRKLVQRLKRLEKKNNIKIKIK 507


>emb|CAA27651.1| (X04021) putative 29K protein [Methanococcus vannielii]
           Length = 261
           
 Score =  210 bits (528), Expect = 5e-53
 Identities = 117/261 (44%), Positives = 166/261 (62%), Gaps = 12/261 (4%)

Query: 360 MVGVVHATKPIDAIQRFIGRVELGMIPQIVDTVIFIKGGKVAKVLTLEYKVKVPTGMKEE 419
           MVGVVHA+KPID+IQR IGRVELG+IPQIVDTV+FI+ GK+ KV  +E+ VKVP GMKE 
Sbjct: 1   MVGVVHASKPIDSIQRLIGRVELGIIPQIVDTVVFIEKGKIGKVYDVEFNVKVPHGMKEA 60

Query: 420 DLARPVIEVRDFETGQLEYEIYTFGEEVSVVPIKK--EEKAPALKLAEKRLKQEIQRFLP 477
           DLARPVIEV DF T   EYEIYT+GE+V V+PI++   +K P LK AE+++ + +++ LP
Sbjct: 61  DLARPVIEVVDFLTRSPEYEIYTYGEQVVVMPIRETATKKGPVLKYAEEKISEILKKHLP 120

Query: 478 -DVYTEVEVVTPHKAVVYADEYDIPAIIGKKGKRIQELEKRLGISIEVKSLSE------- 529
                E++V+      V   E  IP+IIGK GK I ++E+  G+ I V+  +E       
Sbjct: 121 KKSKPEIKVINNDTVEVKVLEKFIPSIIGKGGKEISKIEELTGLRISVREKTEFEEIDKI 180

Query: 530 --KQPEVKEKIPVEIDEKKKSIVLRVSPDYARKPLRFYAGNEYVFTATPSKKGVVKVSKS 587
                 + +    ++ E  K IV+ V  D+    ++ Y   +YV TAT S  G V +SK 
Sbjct: 181 GGSYEFINDYETTKLTETGKHIVVEVGEDFIGANIKVYVEGQYVCTATVSSSGNVNISKK 240

Query: 588 SPVGKLLQKYLREGFEIWASL 608
           + +GK L+  +R+G +I+  +
Sbjct: 241 TVIGKELENAMRKGKDIYVEI 261


  Database: ./suso.pep
    Posted date:  Jul 6, 2001  5:57 PM
  Number of letters in database: 840,471
  Number of sequences in database:  2977
  
  Database: /banques/blast2/nr.pep
    Posted date:  Dec 14, 2000 12:46 PM
  Number of letters in database: 188,266,275
  Number of sequences in database:  595,510
  
Lambda     K      H
   0.316    0.137    0.379 

Gapped
Lambda     K      H
   0.270   0.0470    0.230 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 224049142
Number of Sequences: 2977
Number of extensions: 9778725
Number of successful extensions: 41234
Number of sequences better than 1.0e-10: 12
Number of HSP's better than  0.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 41182
Number of HSP's gapped (non-prelim): 14
length of query: 608
length of database: 189,106,746
effective HSP length: 61
effective length of query: 547
effective length of database: 152,599,039
effective search space: 83471674333
effective search space used: 83471674333
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.6 bits)
S2: 168 (69.9 bits)