BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB1633 (PAB1633) DE:TWITCHING MOBILITY (PILT) RELATED PROTEIN
(PILT)
(608 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||H75089 twitching mobility (pilt) related protein (pilt) PAB... 1192 0.0
pir||D71053 hypothetical protein PH1123 - Pyrococcus horikoshii ... 1103 0.0
emb|CAC11461.1| (AL445063) conserved hypothetical protein [Therm... 640 0.0
pir||D64491 hypothetical protein homolog MJ1533 - Methanococcus ... 627 e-178
pir||G69130 conserved hypothetical protein MTH246 - Methanobacte... 586 e-166
gi|11499533 conserved hypothetical protein [Archaeoglobus fulgid... 579 e-164
pir||S28724 conserved hypothetical protein (hisI 3' region) - Me... 561 e-159
gb|AAG20653.1| (AE005134) Vng2615c [Halobacterium sp. NRC-1] 555 e-157
pir||E72741 hypothetical protein APE0462 - Aeropyrum pernix (str... 448 e-125
gb|AAK40888.1| Conserved hypothetical protein [Sulfolobus solfat... 429 e-119
emb|CAB57726.1| (Y18930) hypothetical protein [Sulfolobus solfat... 429 e-119
emb|CAA27651.1| (X04021) putative 29K protein [Methanococcus van... 210 5e-53
>pir||H75089 twitching mobility (pilt) related protein (pilt) PAB1633 -
Pyrococcus abyssi (strain Orsay)
>gi|5458533|emb|CAB50021.1| (AJ248286) TWITCHING
MOBILITY (PILT) RELATED PROTEIN (PILT) [Pyrococcus
abyssi]
Length = 608
Score = 1192 bits (3051), Expect = 0.0
Identities = 608/608 (100%), Positives = 608/608 (100%)
Query: 1 MLVGGETMKVIVPDTSVIVDGRLTQYLKRVREKVKVVVPEAVVAEIEHQANEGKAIGHTG 60
MLVGGETMKVIVPDTSVIVDGRLTQYLKRVREKVKVVVPEAVVAEIEHQANEGKAIGHTG
Sbjct: 1 MLVGGETMKVIVPDTSVIVDGRLTQYLKRVREKVKVVVPEAVVAEIEHQANEGKAIGHTG 60
Query: 61 LEELKKLRELADKGKILLEFYGERPELWQIKRAKAGEIDHMVREVARELNAVLITGDQVQ 120
LEELKKLRELADKGKILLEFYGERPELWQIKRAKAGEIDHMVREVARELNAVLITGDQVQ
Sbjct: 61 LEELKKLRELADKGKILLEFYGERPELWQIKRAKAGEIDHMVREVARELNAVLITGDQVQ 120
Query: 121 RDIAIAKGIEVIYLESKREPKTRLEDFFDDETMSVHLKAGVRPLAKKGRPGEWKLVPIRD 180
RDIAIAKGIEVIYLESKREPKTRLEDFFDDETMSVHLKAGVRPLAKKGRPGEWKLVPIRD
Sbjct: 121 RDIAIAKGIEVIYLESKREPKTRLEDFFDDETMSVHLKAGVRPLAKKGRPGEWKLVPIRD 180
Query: 181 KPLDEEELEEIADDIVERARRDPESFIELDEPGATVVQLRNYRIVIAKPPFSDRIEITAV 240
KPLDEEELEEIADDIVERARRDPESFIELDEPGATVVQLRNYRIVIAKPPFSDRIEITAV
Sbjct: 181 KPLDEEELEEIADDIVERARRDPESFIELDEPGATVVQLRNYRIVIAKPPFSDRIEITAV 240
Query: 241 RPIKKLSIEDYNLSGKLLERLKEKAEGILVAGPPGAGKTTFVQALAEWYASMGKIVKTME 300
RPIKKLSIEDYNLSGKLLERLKEKAEGILVAGPPGAGKTTFVQALAEWYASMGKIVKTME
Sbjct: 241 RPIKKLSIEDYNLSGKLLERLKEKAEGILVAGPPGAGKTTFVQALAEWYASMGKIVKTME 300
Query: 301 KPRDLQVSEEITQYTALNGSMEKTGDVLLLVRPDYTIFDEMRKTSDFLIYTDLRLAGVGM 360
KPRDLQVSEEITQYTALNGSMEKTGDVLLLVRPDYTIFDEMRKTSDFLIYTDLRLAGVGM
Sbjct: 301 KPRDLQVSEEITQYTALNGSMEKTGDVLLLVRPDYTIFDEMRKTSDFLIYTDLRLAGVGM 360
Query: 361 VGVVHATKPIDAIQRFIGRVELGMIPQIVDTVIFIKGGKVAKVLTLEYKVKVPTGMKEED 420
VGVVHATKPIDAIQRFIGRVELGMIPQIVDTVIFIKGGKVAKVLTLEYKVKVPTGMKEED
Sbjct: 361 VGVVHATKPIDAIQRFIGRVELGMIPQIVDTVIFIKGGKVAKVLTLEYKVKVPTGMKEED 420
Query: 421 LARPVIEVRDFETGQLEYEIYTFGEEVSVVPIKKEEKAPALKLAEKRLKQEIQRFLPDVY 480
LARPVIEVRDFETGQLEYEIYTFGEEVSVVPIKKEEKAPALKLAEKRLKQEIQRFLPDVY
Sbjct: 421 LARPVIEVRDFETGQLEYEIYTFGEEVSVVPIKKEEKAPALKLAEKRLKQEIQRFLPDVY 480
Query: 481 TEVEVVTPHKAVVYADEYDIPAIIGKKGKRIQELEKRLGISIEVKSLSEKQPEVKEKIPV 540
TEVEVVTPHKAVVYADEYDIPAIIGKKGKRIQELEKRLGISIEVKSLSEKQPEVKEKIPV
Sbjct: 481 TEVEVVTPHKAVVYADEYDIPAIIGKKGKRIQELEKRLGISIEVKSLSEKQPEVKEKIPV 540
Query: 541 EIDEKKKSIVLRVSPDYARKPLRFYAGNEYVFTATPSKKGVVKVSKSSPVGKLLQKYLRE 600
EIDEKKKSIVLRVSPDYARKPLRFYAGNEYVFTATPSKKGVVKVSKSSPVGKLLQKYLRE
Sbjct: 541 EIDEKKKSIVLRVSPDYARKPLRFYAGNEYVFTATPSKKGVVKVSKSSPVGKLLQKYLRE 600
Query: 601 GFEIWASL 608
GFEIWASL
Sbjct: 601 GFEIWASL 608
>pir||D71053 hypothetical protein PH1123 - Pyrococcus horikoshii
>gi|3257539|dbj|BAA30222.1| (AP000005) 605aa long
hypothetical protein [Pyrococcus horikoshii]
Length = 605
Score = 1103 bits (2821), Expect = 0.0
Identities = 552/602 (91%), Positives = 587/602 (96%), Gaps = 1/602 (0%)
Query: 8 MKVIVPDTSVIVDGRLTQYLKRVREKVKVVVPEAVVAEIEHQANEGKAIGHTGLEELKKL 67
++VIVPDTSVIVDGRLTQYL+RVREKVK+VVPEAVVAEIEHQANEGKAIGHTGLEELKKL
Sbjct: 4 VRVIVPDTSVIVDGRLTQYLRRVREKVKIVVPEAVVAEIEHQANEGKAIGHTGLEELKKL 63
Query: 68 RELADKGKILLEFYGERPELWQIKRAKAGEIDHMVREVARELNAVLITGDQVQRDIAIAK 127
RELADKGKILLEFYGERPELWQIKRAKAGEIDHMVREVARELNA LITGDQVQRDIAIAK
Sbjct: 64 RELADKGKILLEFYGERPELWQIKRAKAGEIDHMVREVARELNATLITGDQVQRDIAIAK 123
Query: 128 GIEVIYLESKREPKTRLEDFFDDETMSVHLKAGVRPLAKKGRPGEWKLVPIRDKPLDEEE 187
GIEVIYLE KREPKTRLEDFFD+ETMSVHLKAGV+PLAKKG+PGEWKLVPIR++PL EEE
Sbjct: 124 GIEVIYLEGKREPKTRLEDFFDEETMSVHLKAGVKPLAKKGKPGEWKLVPIREEPLSEEE 183
Query: 188 LEEIADDIVERARRDPESFIELDEPGATVVQLRNYRIVIAKPPFSDRIEITAVRPIKKLS 247
LE+IADDIVERA+RDPESFIELDEPGATVVQLRNYR+VIAKPPFSDRIEITAVRPIKKLS
Sbjct: 184 LEDIADDIVERAKRDPESFIELDEPGATVVQLRNYRVVIAKPPFSDRIEITAVRPIKKLS 243
Query: 248 IEDYNLSGKLLERLKEKAEGILVAGPPGAGKTTFVQALAEWYASMGKIVKTMEKPRDLQV 307
I+DYNLS KLLERLKEKAEGILVAGPPGAGKTTFVQALAEWYASMGKIVKTMEKPRDLQV
Sbjct: 244 IDDYNLSEKLLERLKEKAEGILVAGPPGAGKTTFVQALAEWYASMGKIVKTMEKPRDLQV 303
Query: 308 SEEITQYTALNGSMEKTGDVLLLVRPDYTIFDEMRKTSDFLIYTDLRLAGVGMVGVVHAT 367
EEITQYTAL+GSMEKTGDVLLLVRPDYTIFDEMRKTSDFLIY DLRLAGVGMVGVVHAT
Sbjct: 304 REEITQYTALDGSMEKTGDVLLLVRPDYTIFDEMRKTSDFLIYADLRLAGVGMVGVVHAT 363
Query: 368 KPIDAIQRFIGRVELGMIPQIVDTVIFIKGGKVAKVLTLEYKVKVPTGMKEEDLARPVIE 427
KPIDA+QRFIGRVELGMIPQIVDTVIFIKGGKVAKVLTLEYKVKVPTGMKEEDLARPVIE
Sbjct: 364 KPIDAVQRFIGRVELGMIPQIVDTVIFIKGGKVAKVLTLEYKVKVPTGMKEEDLARPVIE 423
Query: 428 VRDFETGQLEYEIYTFGEEVSVVPIKKEEKAPALKLAEKRLKQEIQRFLPDVYTEVEVVT 487
VRDFETGQLEYEIYTFGEEVSVVPIKKEEKAPALKLAE++LKQEIQ+FLPDVYTEVEVV
Sbjct: 424 VRDFETGQLEYEIYTFGEEVSVVPIKKEEKAPALKLAERKLKQEIQKFLPDVYTEVEVVN 483
Query: 488 PHKAVVYADEYDIPAIIGKKGKRIQELEKRLGISIEVKSLSEKQ-PEVKEKIPVEIDEKK 546
PHKAV+YADEYDIP IIG+KGKRIQELEKRLGI+I+VKSL EK+ +V+EKIPVE++EKK
Sbjct: 484 PHKAVIYADEYDIPLIIGRKGKRIQELEKRLGINIDVKSLGEKEVGKVEEKIPVEVEEKK 543
Query: 547 KSIVLRVSPDYARKPLRFYAGNEYVFTATPSKKGVVKVSKSSPVGKLLQKYLREGFEIWA 606
KSIVLRVSPD+A+KPLRFYAG +YVFTATPSKKGVVKV K+SPVGKLL++Y+ E +EIWA
Sbjct: 544 KSIVLRVSPDFAKKPLRFYAGKDYVFTATPSKKGVVKVGKNSPVGKLLKRYIDENYEIWA 603
Query: 607 SL 608
SL
Sbjct: 604 SL 605
>emb|CAC11461.1| (AL445063) conserved hypothetical protein [Thermoplasma
acidophilum]
Length = 593
Score = 640 bits (1633), Expect = 0.0
Identities = 328/597 (54%), Positives = 435/597 (71%), Gaps = 8/597 (1%)
Query: 12 VPDTSVIVDGRLTQYLKRVREKVKVVVPEAVVAEIEHQANEGKAIGHTGLEELKKLRELA 71
VPDTSVIVDGR TQY++ +E V++PEA+++E+EHQANEG+AIG LEELKKLR L
Sbjct: 4 VPDTSVIVDGRFTQYIQD-KEDANVILPEAMLSEVEHQANEGRAIGFAALEELKKLRSLE 62
Query: 72 DKGKILLEFYGERPELWQIKRAKAGEIDHMVREVARELNAVLITGDQVQRDIAIAKGIEV 131
+GKI +E GERP WQIKRAK+GEID M+R VA + +A+L+TGD +QRD+AI KGI V
Sbjct: 63 KEGKITIEIVGERPREWQIKRAKSGEIDEMIRSVALQYDAMLVTGDNIQRDVAIIKGINV 122
Query: 132 IYLESKREPKTRLEDFFDDETMSVHLKAGVRPLAKKGRPGEWKLVPIRDKPLDEEELEEI 191
YL + +E+FF+D TMSVHLKAG P+ K G+PG K + D L+ +LE I
Sbjct: 123 DYLPPPEKVVKNIEEFFEDTTMSVHLKAGTNPVLKDGKPGSIKYRRL-DYILNRSDLENI 181
Query: 192 ADDIVERARRDPESFIELDEPGATVVQLRNYRIVIAKPPFSDRIEITAVRPIKKLSIEDY 251
A +IV+R + + +SFIE+D GATVVQL+N RIVI +PPFSD IEITAVRP+ KL I+ Y
Sbjct: 182 ASNIVKRGKLEADSFIEMDAQGATVVQLKNIRIVITRPPFSDDIEITAVRPVVKLGIDYY 241
Query: 252 NLSGKLLERLKEKAEGILVAGPPGAGKTTFVQALAEWYASMGKIVKTMEKPRDLQVSEEI 311
+L K+ ERL+ A GILVAG PGAGK+TFVQALAE++ + GKIVKTME+PRDL VS+EI
Sbjct: 242 DLDDKIKERLESSASGILVAGAPGAGKSTFVQALAEFFNARGKIVKTMERPRDLDVSKEI 301
Query: 312 TQYTALNGSMEKTGDVLLLVRPDYTIFDEMRKTSDFLIYTDLRLAGVGMVGVVHATKPID 371
TQYT L GSME TGD+LLLVRPDYTIFDEMR T+DF +Y DLRLAGVGMVGVVHAT+ ID
Sbjct: 302 TQYTELEGSMEMTGDILLLVRPDYTIFDEMRVTNDFKVYADLRLAGVGMVGVVHATRAID 361
Query: 372 AIQRFIGRVELGMIPQIVDTVIFIKGGKVAKVLTLEYKVKVPTGMKEEDLARPVIEVRDF 431
A+QRFIGR+ELG+IPQI+DT+I+I G+VA+VL+ +Y VK+P GM +EDLARPVI V D
Sbjct: 362 ALQRFIGRIELGLIPQIIDTIIYINNGQVAQVLSTQYTVKIPYGMTQEDLARPVIVVSDL 421
Query: 432 ETGQLEYEIYTFGEEVSVVPIKKEEKAPALKLAEKRLKQEIQRFLPDVYTEVEVVTPHKA 491
+G+ YEIY+FGE+V VVP+K+ +++ KLA R++ I+R + EV++V +A
Sbjct: 422 ISGKDLYEIYSFGEQVVVVPVKERKESSISKLAVDRIEDYIKRMIRSDDVEVKMVGDSRA 481
Query: 492 VVYADEYDIPAIIGKKGKRIQELEKRLGISIEVKSLSEKQPEVKEKIPVEIDEKKKSIVL 551
+V D IP +IG+ GK I E+EK+LGI I+V+ ++K VEI K ++
Sbjct: 482 IVRVDPKYIPKLIGRSGKNITEIEKKLGIKIDVEESGSNAE--RQKAGVEIKNK----II 535
Query: 552 RVSPDYARKPLRFYAGNEYVFTATPSKKGVVKVSKSSPVGKLLQKYLREGFEIWASL 608
+ + K +R Y G + A S KG+V++ S+ +G + +++ G +I+ S+
Sbjct: 536 YIDVGHPNKHVRIYLGEVPILQALSSSKGIVRIKLSTEIGNAIYNHIKNGGDIFYSI 592
>pir||D64491 hypothetical protein homolog MJ1533 - Methanococcus jannaschii
>gi|1592164|gb|AAB99554.1| (U67594) conserved
hypothetical protein [Methanococcus jannaschii]
Length = 642
Score = 627 bits (1599), Expect = e-178
Identities = 329/616 (53%), Positives = 448/616 (72%), Gaps = 17/616 (2%)
Query: 9 KVIVPDTSVIVDGRLTQYLKRVREK-VKVVVPEAVVAEIEHQANEGKAIGHTGLEELKKL 67
K + DT V++DGR+T+ ++R + K +++PEAVV+E+E+QAN G+ IG+ G+EEL+KL
Sbjct: 27 KKVCVDTCVVIDGRITELIERGKLKDATIIIPEAVVSELEYQANMGREIGYKGIEELRKL 86
Query: 68 RELADKGKILLEFYGERPELWQIKRAKAGEIDHMVREVARELNAVLITGDQVQRDIAIAK 127
E A + I +E+YGERP +I AK+GEID M+R+VA+E N++L+T D +Q ++A A+
Sbjct: 87 IEKASEHNIKVEYYGERPTREEIFLAKSGEIDAMIRKVAKETNSILLTSDWIQYNLAKAQ 146
Query: 128 GIEVIYLES-KREPKTRLEDFFDDETMSVHLKAGVRPLAKKGRPGEWKLVPIRDKPLDEE 186
GIE +LE+ + E + L+ +FD+ETMSVHLK G P AKKG+PGE KLVPI DK L +E
Sbjct: 147 GIEAYFLEAAEEEVELVLDKYFDEETMSVHLKEGCLPYAKKGKPGEVKLVPIGDKELTKE 206
Query: 187 ELEEIADDIVERARRDPESFIELDEPGATVVQLRNYRIVIAKPPFSDRIEITAVRPIKKL 246
E+E+I D+I++ A ++ F E+ GATV+QL N RI IA+PPFS+ +E+TAVRP+ K
Sbjct: 207 EMEDIIDNIIKYAEQN-NGFFEIQRKGATVIQLGNIRISIARPPFSEALEVTAVRPVVKA 265
Query: 247 SIEDYNLSGKLLERLKEKAEGILVAGPPGAGKTTFVQALAEWYASMGKIVKTMEKPRDLQ 306
S+EDY LS KL+ERLKE+AEGI V+GPPG+GK+TFV ALAE+Y S GKIVKTME PRDLQ
Sbjct: 266 SLEDYELSDKLMERLKERAEGIFVSGPPGSGKSTFVAALAEFYRSQGKIVKTMESPRDLQ 325
Query: 307 VSEEITQYTALNGSMEKTGDVLLLVRPDYTIFDEMRKTSDFLIYTDLRLAGVGMVGVVHA 366
VS+EITQY L G MEKT D+LLLVRPDYTI+DE+RKT DF I+ D+R+AGVGMVGVVHA
Sbjct: 326 VSKEITQYAPLEGDMEKTCDILLLVRPDYTIYDEVRKTRDFEIFADMRMAGVGMVGVVHA 385
Query: 367 TKPIDAIQRFIGRVELGMIPQIVDTVIFIKGGKVAKVLTLEYKVKVPTGMKEEDLARPVI 426
+KPIDAIQR IGRVELG+IPQ+VDTVIFIK GK+ KV +++ VKVP GM EEDLARPVI
Sbjct: 386 SKPIDAIQRLIGRVELGVIPQVVDTVIFIKDGKIQKVYEIDFTVKVPYGMVEEDLARPVI 445
Query: 427 EVRDFETGQLEYEIYTFGEEVSVVPIKKE--EKAPALKLAEKRLKQEIQRFLPDVYTEVE 484
EV+DFETG++EYEIYT+GE+V V+PIK+E +KAP AE++L++ +++ LP +
Sbjct: 446 EVKDFETGRVEYEIYTYGEQVVVMPIKEEGGKKAPIYGYAEEKLEEILKKLLPRKAKPMV 505
Query: 485 VVTPHKAV-VYADEYDIPAIIGKKGKRIQELEKRLGISIEVKSLSEKQPEVKEKI----- 538
VT ++ + E I AIIGK GK I +LE LG+ I VK +++ + E+I
Sbjct: 506 KVTGDNSIDLIVPEKYIGAIIGKGGKEISKLEDMLGLKISVKEKEKEEEKDMERIYRKYE 565
Query: 539 ------PVEIDEKKKSIVLRVSPDYARKPLRFYAGNEYVFTATPSKKGVVKVSKSSPVGK 592
I E K +V+ V D+A + +R Y + + T T G V+++K + VGK
Sbjct: 566 YVNELESTRIYETDKYVVVDVGEDFAGENIRIYIDGKLLTTVTVRNDGTVRINKKTKVGK 625
Query: 593 LLQKYLREGFEIWASL 608
+ + + EG +I+ L
Sbjct: 626 EILEAIDEGRDIYVDL 641
>pir||G69130 conserved hypothetical protein MTH246 - Methanobacterium
thermoautotrophicum (strain Delta H)
>gi|2621295|gb|AAB84752.1| (AE000811) twitching mobility
(PilT) related protein [Methanobacterium
thermoautotrophicum]
Length = 610
Score = 586 bits (1494), Expect = e-166
Identities = 304/604 (50%), Positives = 424/604 (69%), Gaps = 10/604 (1%)
Query: 11 IVPDTSVIVDGRLTQYLKRVREK-VKVVVPEAVVAEIEHQANEGKAIGHTGLEELKKLRE 69
IVPDTSVIVDGR+T ++ + +V+VPEAVV+E+E+QAN G+ G GLEELK L++
Sbjct: 3 IVPDTSVIVDGRITGIVQEDEFRGSEVIVPEAVVSELEYQANRGRETGFNGLEELKNLQK 62
Query: 70 LADKGKILLEFYGERPELWQIKRAKAGEIDHMVREVARELNAVLITGDQVQRDIAIAKGI 129
L + I + F G RP + +I ++ GEID M+R ARE +A+LIT D+VQ ++ A+G+
Sbjct: 63 LHKENIISMIFVGRRPTVDEISLSRGGEIDAMIRSTAREYDALLITSDRVQAEVGKAQGL 122
Query: 130 EVIYLESKREPKTRLE--DFFDDETMSVHLKAGVRPLAKKGRPGEWKLVPIRDKPLDEEE 187
+V Y++ + LE +FD+ TMSVHLK V P+AKKGRPGE +LV I +PL +
Sbjct: 123 DVFYIKPEVLEYEELEISKYFDENTMSVHLKENVVPMAKKGRPGEIQLVEIGKRPLKHSD 182
Query: 188 LEEIADDIVERARRDPESFIELDEPGATVVQLRNYRIVIAKPPFSDRIEITAVRPIKKLS 247
+ +A +IVERA+ D +SFIE++ GATVVQ R YRI IA+PPFS+ EITAVRP+ ++S
Sbjct: 183 ISRMAREIVERAKSDFKSFIEIEMEGATVVQFREYRISIARPPFSEAFEITAVRPVARVS 242
Query: 248 IEDYNLSGKLLERLKEKAEGILVAGPPGAGKTTFVQALAEWYA-SMGKIVKTMEKPRDLQ 306
+EDY LS +L+ERL++ A+G+L+AG PGAGK+TF QA+AE+Y+ M +VKTME PRDLQ
Sbjct: 243 LEDYRLSDRLVERLRDTAKGVLIAGSPGAGKSTFAQAVAEFYSRDMKAVVKTMESPRDLQ 302
Query: 307 VSEEITQYTALNGSMEKTGDVLLLVRPDYTIFDEMRKTSDFLIYTDLRLAGVGMVGVVHA 366
V +EITQY + M+KT D+LLLVRPDYTI+DE+RKT DF I+ D+RLAGVGMVGVVHA
Sbjct: 303 VGDEITQYAPIERDMQKTADILLLVRPDYTIYDELRKTRDFRIFADMRLAGVGMVGVVHA 362
Query: 367 TKPIDAIQRFIGRVELGMIPQIVDTVIFIKGGKVAKVLTLEYKVKVPTGMKEEDLARPVI 426
T+PIDAIQR +GRVELG+IP +VDT IFI+ G+V V + VKVPTGM+E DLARPVI
Sbjct: 363 TRPIDAIQRILGRVELGVIPSVVDTTIFIEDGEVKAVYDVSLTVKVPTGMQEADLARPVI 422
Query: 427 EVRDFETGQLEYEIYTFGEEVSVVPIKKE----EKAPALKLAEKRLKQEIQRFLPDVYTE 482
E+RD E+G+L +EIYT+GE+ V+ + K K A ++AE+ +++E +R +P
Sbjct: 423 EIRDLESGELMHEIYTYGEQTIVMDVSKAAPSGRKPSAHRIAEREIEREFRRRIPGARVR 482
Query: 483 VEVVTPHKAVVYADEYDIPAIIGKKGKRIQELEKRLGISIEVKSLSEKQPEVKEKIPVEI 542
VE+ + +A V+ DE IP +IGKKGK I+E+E +GISI V+ L E++ E ++PVE+
Sbjct: 483 VELESDERARVWIDEKYIPQVIGKKGKTIEEIENSIGISIGVEPLEEREIEETLEVPVEL 542
Query: 543 DEKKKSIVLRVSPDYARKPLRFYAGNEYVFTATPSKKGVVKVSKSSPVGKLLQKYLREGF 602
+VL D +EY+FTAT KKG +K+ + + ++ + ++
Sbjct: 543 --AGNYVVLNFGKDAVGVSFDILVDDEYLFTATVGKKGTIKLRRDIELADIIMEAVKNSI 600
Query: 603 EIWA 606
+ A
Sbjct: 601 PVRA 604
>gi|11499533 conserved hypothetical protein [Archaeoglobus fulgidus]
>gi|7483185|pir||F69493 conserved hypothetical protein
AF1951 - Archaeoglobus fulgidus
>gi|2648590|gb|AAB89303.1| (AE000968) conserved
hypothetical protein [Archaeoglobus fulgidus]
Length = 606
Score = 579 bits (1476), Expect = e-164
Identities = 313/604 (51%), Positives = 424/604 (69%), Gaps = 20/604 (3%)
Query: 4 GGETMKVIVPDTSVIVDGRLTQYLKRVREKVKVVVPEAVVAEIEHQANEGKAIGHTGLEE 63
G + MK +V DTSV++ GR+T+ L+ K ++VPEAV+AE+E QAN GK G GL E
Sbjct: 14 GWKEMKYVV-DTSVVISGRVTEMLESGEIKGTIIVPEAVMAELEAQANFGKMTGFQGLSE 72
Query: 64 LKKLRELA-DKGKILLEFYGERPELWQIKRAKAGEIDHMVREVARELNAVLITGDQVQRD 122
++KL +LA DKG ++ F GERP+L I+ AK GEID+++REVA E +AVL+T D+VQ
Sbjct: 73 IEKLTKLAKDKGFEVI-FAGERPKLEHIRLAKGGEIDNLIREVAAEFDAVLVTSDRVQHL 131
Query: 123 IAIAKGIEVIYLESK--REPKTRLEDFFDDETMSVHLKAGVRPLAKKGRPGEWKLVPIRD 180
+A AKGIE IY+ + R TR+ FF +T SVHL+ GV P AK+GR G+ KLV + D
Sbjct: 132 VARAKGIETIYVRPRVVRPENTRIMSFFTPDTASVHLREGVPPYAKRGRIGDLKLVKLDD 191
Query: 181 KPLDEEELEEIADDIVERARRDPESFIELDEPGATVVQLRNYRIVIAKPPFSDRIEITAV 240
+P+ EEL EIA++I+E AR+D +S IE++ GATVVQLR RI IA+ PF+DR+EITAV
Sbjct: 192 RPMSYEELNEIANEILEAARQDEDSSIEIERRGATVVQLRELRIAIAERPFADRMEITAV 251
Query: 241 RPIKKLSIEDYNLSGKLLERLKEKAEGILVAGPPGAGKTTFVQALAEWYASMGKIVKTME 300
RPI ++SI++Y +S +L R+ E+ GIL++GPPGAGK+TF ++A + G IVKTME
Sbjct: 252 RPIAQVSIDEYGVSEELKRRIVERQRGILISGPPGAGKSTFAASVANFLLENGYIVKTME 311
Query: 301 KPRDLQVSEEITQYTALNGSMEKTGDVLLLVRPDYTIFDEMRKTSDFLIYTDLRLAGVGM 360
PRDL V +EITQY L G M T D+LLLVRPDYTI+DE+R+TSDF ++ D+RLAGVGM
Sbjct: 312 SPRDLMVRDEITQYAPLEGDMSLTSDILLLVRPDYTIYDELRRTSDFQVFADMRLAGVGM 371
Query: 361 VGVVHATKPIDAIQRFIGRVELGMIPQIVDTVIFIKGGKVAKVLTLEYKVKVPTGMKEED 420
+GV HAT+ +DAIQR IGRVELGMIPQ+VDTV+FI G++ KV L + VKVPTGM E D
Sbjct: 372 IGVTHATRAVDAIQRMIGRVELGMIPQVVDTVVFIDAGRIVKVYELSFTVKVPTGMTEAD 431
Query: 421 LARPVIEVRDFETGQLEYEIYTFGEEVSVVPIKKEEKAPALKLAEKRLKQEIQRFLPDVY 480
LARPVIEVRDFET LEYEIYT+GE+V V+PI+ +E A L+++I +++ D
Sbjct: 432 LARPVIEVRDFETKNLEYEIYTYGEQVVVMPIETDENLKA------ALEEKISKYVDDF- 484
Query: 481 TEVEVVTPHKAVVYADEYDIPAIIGKKGKRIQELEKRLGISIEVKSLSEKQPEVKEKIPV 540
EVE+V KAV+ E IP +IG+KG+RI+ +E ISI+V EV+E++
Sbjct: 485 -EVEMV-GRKAVIKVPEKHIPTLIGRKGRRIKNIEDEFKISIDV-----IPKEVEEEVEA 537
Query: 541 EIDEKKKSIVLRVSPDYARKPLRFYAGNEYVFTATPSKKGVVKVSKSSPVGKLLQKYLRE 600
++E K V+ + + + YAG+EY+FTA S+KG +++ K GK L+ L +
Sbjct: 538 SVEESGKHYVIH-AKGLEGRTVDVYAGDEYLFTALVSRKGWIRIRKDKEGGKSLRLALAK 596
Query: 601 GFEI 604
I
Sbjct: 597 NLPI 600
>pir||S28724 conserved hypothetical protein (hisI 3' region) - Methanococcus
vannielii >gi|44719|emb|CAA27650.1| (X04021)
hypothetical protein [Methanococcus vannielii]
Length = 634
Score = 561 bits (1430), Expect = e-159
Identities = 296/612 (48%), Positives = 426/612 (69%), Gaps = 16/612 (2%)
Query: 11 IVPDTSVIVDGRLTQYLKR-VREKVKVVVPEAVVAEIEHQANEGKAIGHTGLEELKKLRE 69
I DT VI+DGR+T+++++ + E K++VPEAV++E+E QAN+G+ IG+ G+EELK L +
Sbjct: 25 ITVDTCVIIDGRITEFIEKGLIENCKIIVPEAVISELEAQANKGREIGYFGIEELKNLID 84
Query: 70 LADKGKILLEFYGERPELWQIKRAKAGEIDHMVREVARELNAVLITGDQVQRDIAIAKGI 129
++ + I +E+YGERP + ++ A+ GEID ++R+VARE ++L T D++Q ++A+A+GI
Sbjct: 85 ISKEKGIEIEYYGERPSIDEVSLARGGEIDAIIRKVARETKSILFTSDKIQYNLAVAQGI 144
Query: 130 EVIYLES-KREPKTRLEDFFDDETMSVHLKAGVRPLAKKGRPGEWKLVPIRDKPLDEEEL 188
+L+ ++ ++ +FD+ T SVHLK P K+G+PG +L+P + L + +L
Sbjct: 145 LAKFLKVVEKRVDLFIKKYFDEITSSVHLKEDCIPYVKRGKPGNVRLIPYIPETLTKNDL 204
Query: 189 EEIADDIVERARRDPESFIELDEPGATVVQLRNYRIVIAKPPFSDRIEITAVRPIKKLSI 248
+ + D+I++ ++ IE++ GATV+QL N RI I +PPFS+ +EITAVRPI K+S+
Sbjct: 205 KVLIDNILKYTEQN-NGLIEIERFGATVIQLGNLRISITRPPFSEALEITAVRPITKVSL 263
Query: 249 EDYNLSGKLLERLKEKAEGILVAGPPGAGKTTFVQALAEWYASMGKIVKTMEKPRDLQVS 308
EDYNLS L ERL + AEG+ V+G PG+GK+TFV ALAE + +MGKIVKTME PRDLQV
Sbjct: 264 EDYNLSEDLKERL-DNAEGVFVSGAPGSGKSTFVAALAERFKNMGKIVKTMESPRDLQVG 322
Query: 309 EEITQYTALNGSMEKTGDVLLLVRPDYTIFDEMRKTSDFLIYTDLRLAGVGMVGVVHATK 368
EITQY L GSMEKT D+LLLVRPDYTI+DE+RKT DF I+ D+R+AGVGMVGVVHA+K
Sbjct: 323 NEITQYAPLEGSMEKTCDILLLVRPDYTIYDEVRKTKDFEIFADMRMAGVGMVGVVHASK 382
Query: 369 PIDAIQRFIGRVELGMIPQIVDTVIFIKGGKVAKVLTLEYKVKVPTGMKEEDLARPVIEV 428
PID+IQR IGRVELG+IPQIVDTV+FI+ GK+ KV +E+ VKVP GMKE DLARPVIEV
Sbjct: 383 PIDSIQRLIGRVELGIIPQIVDTVVFIEKGKIGKVYDVEFNVKVPHGMKEADLARPVIEV 442
Query: 429 RDFETGQLEYEIYTFGEEVSVVPIKK--EEKAPALKLAEKRLKQEIQRFLP-DVYTEVEV 485
DF T EYEIYT+GE+V V+PI++ +K P LK AE+++ + +++ LP E++V
Sbjct: 443 VDFLTRSPEYEIYTYGEQVVVMPIRETATKKGPVLKYAEEKISEILKKHLPKKSKPEIKV 502
Query: 486 VTPHKAVVYADEYDIPAIIGKKGKRIQELEKRLGISIEVKSLSE---------KQPEVKE 536
+ V E IP+IIGK GK I ++E+ G+ I V+ +E + +
Sbjct: 503 INNDTVEVKVLEKFIPSIIGKGGKEISKIEELTGLRISVREKTEFEEIDKIGGSYEFIND 562
Query: 537 KIPVEIDEKKKSIVLRVSPDYARKPLRFYAGNEYVFTATPSKKGVVKVSKSSPVGKLLQK 596
++ E K IV+ V D+ ++ Y +YV TAT S G V +SK + +GK L+
Sbjct: 563 YETTKLTETGKHIVVEVGEDFIGANIKVYVEGQYVCTATVSSSGNVNISKKTVIGKELEN 622
Query: 597 YLREGFEIWASL 608
+R+G +I+ +
Sbjct: 623 AMRKGKDIYVEI 634
>gb|AAG20653.1| (AE005134) Vng2615c [Halobacterium sp. NRC-1]
Length = 619
Score = 555 bits (1416), Expect = e-157
Identities = 298/604 (49%), Positives = 410/604 (67%), Gaps = 19/604 (3%)
Query: 11 IVPDTSVIVDGRLTQYLKR-VREKVKVVVPEAVVAEIEHQANEGKAIGHTGLEELKKLRE 69
+VPDTSV+VDGR+++ ++ E V VPEAVV E+E QAN G+ G LEEL++L E
Sbjct: 3 VVPDTSVVVDGRISRGVEDGTYEGATVYVPEAVVGEVEAQANGGRQTGWDALEELQRLVE 62
Query: 70 LADKGKILLEFYGERPELWQIKRAKAGEIDHMVREVARELNAVLITGDQVQRDIAIAKGI 129
LAD G I +E+ GER + IKRA AG ID ++R+VA +A +T D VQ ++A KGI
Sbjct: 63 LADDGAITVEYVGERADEDDIKRAAAGAIDAIIRDVAAAHDATFVTSDIVQAEVAEGKGI 122
Query: 130 EVIYLESKREPKTR---LEDFFDDETMSVHLKAGVRPLAKKGRPGEWKLVPIRDKPLDEE 186
+V +LE EP +E++ D++TMS+HLKAG+ P AK+G GE + I + LDE
Sbjct: 123 DVEFLEPL-EPDFEALAIEEYLDEDTMSLHLKAGMVPKAKRGDVGEIEYQAIGEDALDES 181
Query: 187 ELEEIADDIVERARRDPESFIELDEPGATVVQLRNYRIVIAKPPFSDRIEITAVRPIKKL 246
+ E A +IV A+R ++FIEL E G T+ Q+R+ RI I++PPFS+R+EITAVRPI K
Sbjct: 182 LVREYATEIVSTAKRADDAFIELSEDGMTIAQVRDLRIAISEPPFSERVEITAVRPIVKT 241
Query: 247 SIEDYNLSGKLLERLKEKAEGILVAGPPGAGKTTFVQALAEWYASMGKIVKTMEKPRDLQ 306
+++DY + L ERL E+ G+L+AG PGAGK+TF QA+AE+ A G +VKTMEKPRDLQ
Sbjct: 242 TMDDYTQADALRERLLERDRGVLIAGAPGAGKSTFAQAVAEFLADAGNVVKTMEKPRDLQ 301
Query: 307 VSEEITQYTALNGSMEKTGDVLLLVRPDYTIFDEMRKTSDFLIYTDLRLAGVGMVGVVHA 366
+ EE+TQYTAL+GSMEKT D LL+VRPDYTI+DE+RKT DF +++D+RLAGVGMVGVVHA
Sbjct: 302 LDEEVTQYTALSGSMEKTADSLLMVRPDYTIYDEVRKTDDFEVFSDMRLAGVGMVGVVHA 361
Query: 367 TKPIDAIQRFIGRVELGMIPQIVDTVIFIKGGKVAKVLTLEYKVKVPTGMKEEDLARPVI 426
T+PIDA+QR +GRVELGMIPQIVDTV++I+ G V V + +VKVP G+ EEDLARPVI
Sbjct: 362 TRPIDALQRLVGRVELGMIPQIVDTVVYIEAGNVETVYDVTTEVKVPEGLMEEDLARPVI 421
Query: 427 EVRDFETGQLEYEIYTFGEEVSVVPIKKEEKAPALKLAEKRLKQEIQRFLPDVYTE---V 483
+VRDFET YE+YTF +V VP+ E +K KQE++R + + V
Sbjct: 422 QVRDFETNVPAYELYTFNRQVVTVPLDGESGGAGESGVDKLAKQEVEREIQAATRDRVAV 481
Query: 484 EVVTPHKAVVYADEYDIPAIIGKKGKRIQELEKRLGISIEVKSLSEKQPEVKEKIPVEID 543
++ P+ AVVY + DI +IGK G RI ++E RLGI I+V++L E+ E + D
Sbjct: 482 DIRGPNDAVVYVSDDDISHVIGKGGGRIADIENRLGIDIDVRTLDERPTESAADPDSDTD 541
Query: 544 EKK-----------KSIVLRVSPDYARKPLRFYAGNEYVFTATPSKKGVVKVSKSSPVGK 592
+ + + I++ + D A + + A EY+FTAT + G +KVS+ S + +
Sbjct: 542 DAQAGEIVTPEITSRHIIVPMGDDRAGETVEVQADGEYLFTATVGRGGDIKVSRGSTIAE 601
Query: 593 LLQK 596
L++
Sbjct: 602 ELER 605
>pir||E72741 hypothetical protein APE0462 - Aeropyrum pernix (strain K1)
>gi|5104109|dbj|BAA79425.1| (AP000059) 513aa long
hypothetical protein [Aeropyrum pernix]
Length = 513
Score = 448 bits (1141), Expect = e-125
Identities = 230/480 (47%), Positives = 319/480 (65%), Gaps = 12/480 (2%)
Query: 4 GGETMKVIVPDTSVIVDGRLTQYLKRVREKVKVVVPEAVVAEIEHQANEGKAIGHTGLEE 63
GGE V + D +VDG + + + +V++ A+V + +A G++ G+ GL E
Sbjct: 6 GGE---VYLLDLDSVVDGSALRMISSGGLRGRVLIHSALVDYLYSEAKRGRSAGYAGLAE 62
Query: 64 LKKLRELADKGKILLEFYGERPELWQIKRAKAGEIDHMVREVARELNAVLITGDQVQRDI 123
L +L + A G + + + +++ GE+ ++R A + A L+T D VQ
Sbjct: 63 LSRLMD-AGVGDVEIVVVEDDA---RVQPRDEGELKSVLRRYALRVGATLVTSDPVQARA 118
Query: 124 AIAKGIEVIYLESKREPKTRLEDFFDDETMSVHLKAGVRPLAKKGRPGEWKLVPIRDKPL 183
A A G+ V++ R + R+E+FFD TMSVHLK GV PLAK G+PG W V + DKPL
Sbjct: 119 ARALGVSVLFTGRSRTGRIRIEEFFDGRTMSVHLKEGVPPLAKVGKPGSWMFVSLSDKPL 178
Query: 184 DEEELEEIADDIVERARRDPESFIELDEPGATVVQLRNYRIVIAKPPFSDRIEITAVRPI 243
E+EEIA +I+E + + E FIE+D G+T+VQL++YRIVI +PP SD E+TAV+P+
Sbjct: 179 TRAEIEEIAREIIEASALEEEGFIEIDRSGSTIVQLKDYRIVITRPPLSDGWEVTAVKPV 238
Query: 244 KKLSIEDYNLSGKLLERLKEKAEGILVAGPPGAGKTTFVQALAEWYASMGKIVKTMEKPR 303
KL +EDY+L KL RL E+AEGIL+AG PG GKTTF QALA +YA GK+VKT+E PR
Sbjct: 239 AKLRLEDYSLPEKLYNRLLERAEGILIAGAPGMGKTTFAQALATFYAEQGKVVKTIESPR 298
Query: 304 DLQVSEEITQYTALNGSMEKTGDVLLLVRPDYTIFDEMRKTSDFLIYTDLRLAGVGMVGV 363
D+++ +TQY+ + + D+LLL RPDYT++DE+R DF +Y DLRLAG+GM+GV
Sbjct: 299 DMRLPPNVTQYSKNYADLGELHDILLLSRPDYTVYDELRSDEDFQLYVDLRLAGIGMIGV 358
Query: 364 VHATKPIDAIQRFIGRVELGMIPQIVDTVIFIKGGKVAKVLTLEYKVKVPTGMKEEDLAR 423
VHAT PIDA+QRF+ RVELGMIP I+DTVIFI G+V+KV L VK+PTG++E +L+R
Sbjct: 359 VHATTPIDAVQRFLRRVELGMIPSIIDTVIFIDSGEVSKVYELSITVKLPTGLREAELSR 418
Query: 424 PVIEVRDFETGQLEYEIYTFGEEVSVVPIKKEEKAPALKLAEKRLKQEIQRFLPDVYTEV 483
PV+EVRDF TG+LEYEIYTFGE+ VVP+++ E + I++ LPD EV
Sbjct: 419 PVVEVRDFITGELEYEIYTFGEQTMVVPVRERRGR-----GEAAILGAIRKLLPDAEVEV 473
>gb|AAK40888.1| Conserved hypothetical protein [Sulfolobus solfataricus]
Length = 510
Score = 429 bits (1091), Expect = e-119
Identities = 219/523 (41%), Positives = 333/523 (62%), Gaps = 16/523 (3%)
Query: 3 VGGETMKVIVPDTSVIVDGRLTQYLKRVREKVKVVVPEAVVAEIEHQANEGKAIGHTGLE 62
+G + ++ D S ++ G +++YL++ +++ ++++AE+E ++N+G L+
Sbjct: 1 MGIRILNDLMLDKSALLFG-VSKYLEKGIITGNILIHKSLLAELEKESNDGLVSAEIALD 59
Query: 63 ELKKLRELADKGKILLEFYGERPELWQIKRAKAGEIDHMVREVARELNAVLITGDQVQRD 122
E+KKL+++ ++ + E GE +K GE + + RE E +++T D+ Q+
Sbjct: 60 EVKKLKDITERILVNFEIVGEN--------SKKGEANELSREYCLEKGCIMVTADETQKK 111
Query: 123 IAIAKGIEVIYLESKREPKTRLEDFFDDETMSVHLKAGVRPLAKKGRPGEWKLVPIRDKP 182
I GI+ +L+ E E FFDDETMS+H+K P AKKG+PG WK V + +KP
Sbjct: 112 ICDVMGIQYSFLQPL-EQSLSFESFFDDETMSLHIKEDTVPRAKKGKPGNWKFVNLSNKP 170
Query: 183 LDEEELEEIADDIVERARRDPESFIELDEPGATVVQLRNYRIVIAKPPFSDRIEITAVRP 242
+ +++ IA++I+ R SFIE++ G+ ++QL NYR+VI +PP SD EIT RP
Sbjct: 171 MLSVDVKRIANEIINGVRFIKGSFIEIERKGSLIIQLGNYRVVITRPPLSDGWEITITRP 230
Query: 243 IKKLSIEDYNLSGKLLERLKEKAEGILVAGPPGAGKTTFVQALAEWYASMGKIVKTMEKP 302
+ + +EDY L +L++RL+E+AEGI++AG PG GKTTF QAL+E+Y +GKIVKT+E P
Sbjct: 231 VVRKRLEDYGLDERLIKRLEERAEGIIIAGAPGMGKTTFAQALSEYYMRLGKIVKTIESP 290
Query: 303 RDLQVSEEITQYTALNGSMEKTGDVLLLVRPDYTIFDEMRKTSDFLIYTDLRLAGVGMVG 362
RD+ + EITQY+ + + D+LLL RPDYT++DEMR DF +Y DLRLAG+GMVG
Sbjct: 291 RDMHLPPEITQYSKNYAEIGELHDILLLSRPDYTVYDEMRNDEDFKLYIDLRLAGIGMVG 350
Query: 363 VVHATKPIDAIQRFIGRVELGMIPQIVDTVIFIKGGKVAKVLTLEYKVKVPTGMKEEDLA 422
VVHAT PIDAI RF+ RV++G IP I+DT+IFI G V+KV TLE VKVP G+KE DLA
Sbjct: 351 VVHATSPIDAIHRFVNRVDIGTIPNILDTIIFINSGNVSKVYTLEITVKVPAGLKEADLA 410
Query: 423 RPVIEVRDFETGQLEYEIYTFGEEVSVVPIKKEEKAPALKLAEKRLKQEIQRFLPDVYTE 482
RPV+E++D TG EYEIY FGE+ +VP+ + L E ++ + + +P +
Sbjct: 411 RPVVEIKDLVTGNTEYEIYVFGEQTMIVPV---NRGITLNNMEFKISKIVNNIIPKATVK 467
Query: 483 VEVVTPHKAVVYADEYDIPAIIGKKGKRIQELEKRLGISIEVK 525
E + V+ + +I K +R++ LEK+ I I++K
Sbjct: 468 YE---DGEYVIVIPKEEIGKYNRKLVQRLKRLEKKNNIKIKIK 507
>emb|CAB57726.1| (Y18930) hypothetical protein [Sulfolobus solfataricus]
Length = 510
Score = 429 bits (1091), Expect = e-119
Identities = 219/523 (41%), Positives = 333/523 (62%), Gaps = 16/523 (3%)
Query: 3 VGGETMKVIVPDTSVIVDGRLTQYLKRVREKVKVVVPEAVVAEIEHQANEGKAIGHTGLE 62
+G + ++ D S ++ G +++YL++ +++ ++++AE+E ++N+G L+
Sbjct: 1 MGIRILNDLMLDKSALLFG-VSKYLEKGIITGNILIHKSLLAELEKESNDGLVSAEIALD 59
Query: 63 ELKKLRELADKGKILLEFYGERPELWQIKRAKAGEIDHMVREVARELNAVLITGDQVQRD 122
E+KKL+++ ++ + E GE +K GE + + RE E +++T D+ Q+
Sbjct: 60 EVKKLKDITERILVNFEIVGEN--------SKKGEANELSREYCLEKGCIMVTADETQKK 111
Query: 123 IAIAKGIEVIYLESKREPKTRLEDFFDDETMSVHLKAGVRPLAKKGRPGEWKLVPIRDKP 182
I GI+ +L+ E E FFDDETMS+H+K P AKKG+PG WK V + +KP
Sbjct: 112 ICDVMGIQYSFLQPL-EQSLSFESFFDDETMSLHIKEDTVPRAKKGKPGNWKFVNLSNKP 170
Query: 183 LDEEELEEIADDIVERARRDPESFIELDEPGATVVQLRNYRIVIAKPPFSDRIEITAVRP 242
+ +++ IA++I+ R SFIE++ G+ ++QL NYR+VI +PP SD EIT RP
Sbjct: 171 MLSVDVKRIANEIINGVRFIKGSFIEIERKGSLIIQLGNYRVVITRPPLSDGWEITITRP 230
Query: 243 IKKLSIEDYNLSGKLLERLKEKAEGILVAGPPGAGKTTFVQALAEWYASMGKIVKTMEKP 302
+ + +EDY L +L++RL+E+AEGI++AG PG GKTTF QAL+E+Y +GKIVKT+E P
Sbjct: 231 VVRKRLEDYGLDERLIKRLEERAEGIIIAGAPGMGKTTFAQALSEYYMRLGKIVKTIESP 290
Query: 303 RDLQVSEEITQYTALNGSMEKTGDVLLLVRPDYTIFDEMRKTSDFLIYTDLRLAGVGMVG 362
RD+ + EITQY+ + + D+LLL RPDYT++DEMR DF +Y DLRLAG+GMVG
Sbjct: 291 RDMHLPPEITQYSKNYAEIGELHDILLLSRPDYTVYDEMRNDEDFKLYIDLRLAGIGMVG 350
Query: 363 VVHATKPIDAIQRFIGRVELGMIPQIVDTVIFIKGGKVAKVLTLEYKVKVPTGMKEEDLA 422
VVHAT PIDAI RF+ RV++G IP I+DT+IFI G V+KV TLE VKVP G+KE DLA
Sbjct: 351 VVHATSPIDAIHRFVNRVDIGTIPNILDTIIFINSGNVSKVYTLEITVKVPAGLKEADLA 410
Query: 423 RPVIEVRDFETGQLEYEIYTFGEEVSVVPIKKEEKAPALKLAEKRLKQEIQRFLPDVYTE 482
RPV+E++D TG EYEIY FGE+ +VP+ + L E ++ + + +P +
Sbjct: 411 RPVVEIKDLVTGNTEYEIYVFGEQTMIVPV---NRGITLNNMEFKISKIVNNIIPKATVK 467
Query: 483 VEVVTPHKAVVYADEYDIPAIIGKKGKRIQELEKRLGISIEVK 525
E + V+ + +I K +R++ LEK+ I I++K
Sbjct: 468 YE---DGEYVIVIPKEEIGKYNRKLVQRLKRLEKKNNIKIKIK 507
>emb|CAA27651.1| (X04021) putative 29K protein [Methanococcus vannielii]
Length = 261
Score = 210 bits (528), Expect = 5e-53
Identities = 117/261 (44%), Positives = 166/261 (62%), Gaps = 12/261 (4%)
Query: 360 MVGVVHATKPIDAIQRFIGRVELGMIPQIVDTVIFIKGGKVAKVLTLEYKVKVPTGMKEE 419
MVGVVHA+KPID+IQR IGRVELG+IPQIVDTV+FI+ GK+ KV +E+ VKVP GMKE
Sbjct: 1 MVGVVHASKPIDSIQRLIGRVELGIIPQIVDTVVFIEKGKIGKVYDVEFNVKVPHGMKEA 60
Query: 420 DLARPVIEVRDFETGQLEYEIYTFGEEVSVVPIKK--EEKAPALKLAEKRLKQEIQRFLP 477
DLARPVIEV DF T EYEIYT+GE+V V+PI++ +K P LK AE+++ + +++ LP
Sbjct: 61 DLARPVIEVVDFLTRSPEYEIYTYGEQVVVMPIRETATKKGPVLKYAEEKISEILKKHLP 120
Query: 478 -DVYTEVEVVTPHKAVVYADEYDIPAIIGKKGKRIQELEKRLGISIEVKSLSE------- 529
E++V+ V E IP+IIGK GK I ++E+ G+ I V+ +E
Sbjct: 121 KKSKPEIKVINNDTVEVKVLEKFIPSIIGKGGKEISKIEELTGLRISVREKTEFEEIDKI 180
Query: 530 --KQPEVKEKIPVEIDEKKKSIVLRVSPDYARKPLRFYAGNEYVFTATPSKKGVVKVSKS 587
+ + ++ E K IV+ V D+ ++ Y +YV TAT S G V +SK
Sbjct: 181 GGSYEFINDYETTKLTETGKHIVVEVGEDFIGANIKVYVEGQYVCTATVSSSGNVNISKK 240
Query: 588 SPVGKLLQKYLREGFEIWASL 608
+ +GK L+ +R+G +I+ +
Sbjct: 241 TVIGKELENAMRKGKDIYVEI 261
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.316 0.137 0.379
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 224049142
Number of Sequences: 2977
Number of extensions: 9778725
Number of successful extensions: 41234
Number of sequences better than 1.0e-10: 12
Number of HSP's better than 0.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 41182
Number of HSP's gapped (non-prelim): 14
length of query: 608
length of database: 189,106,746
effective HSP length: 61
effective length of query: 547
effective length of database: 152,599,039
effective search space: 83471674333
effective search space used: 83471674333
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.6 bits)
S2: 168 (69.9 bits)