BLASTP 2.0.10 [Aug-26-1999]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= PAB1650 (PAB1650) DE:Hypothetical protein
         (127 letters)

Database: ./suso.pep; /banques/blast2/nr.pep
           598,487 sequences; 189,106,746 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

pir||G75086 hypothetical protein PAB1650 - Pyrococcus abyssi (st...   254  2e-67
pir||C71054 hypothetical protein PH1129 - Pyrococcus horikoshii ...   203  6e-52

>pir||G75086 hypothetical protein PAB1650 - Pyrococcus abyssi (strain Orsay)
           >gi|5458508|emb|CAB49996.1| (AJ248286) hypothetical
           protein [Pyrococcus abyssi]
           Length = 127
           
 Score =  254 bits (643), Expect = 2e-67
 Identities = 127/127 (100%), Positives = 127/127 (100%)

Query: 1   MIERLRIREELTEEQYSKVLKVIERMKSKFPTSFSRKTKTGEKISFIDTNICGGLNFDIL 60
           MIERLRIREELTEEQYSKVLKVIERMKSKFPTSFSRKTKTGEKISFIDTNICGGLNFDIL
Sbjct: 1   MIERLRIREELTEEQYSKVLKVIERMKSKFPTSFSRKTKTGEKISFIDTNICGGLNFDIL 60

Query: 61  VGVREKPFVVVEVEGKKAMMAFGIMKYLLEEAGVEYSPECDGSEAYAELKKVMKAKNLFD 120
           VGVREKPFVVVEVEGKKAMMAFGIMKYLLEEAGVEYSPECDGSEAYAELKKVMKAKNLFD
Sbjct: 61  VGVREKPFVVVEVEGKKAMMAFGIMKYLLEEAGVEYSPECDGSEAYAELKKVMKAKNLFD 120

Query: 121 FLGGQTY 127
           FLGGQTY
Sbjct: 121 FLGGQTY 127


>pir||C71054 hypothetical protein PH1129 - Pyrococcus horikoshii
           >gi|3257546|dbj|BAA30229.1| (AP000005) 131aa long
           hypothetical protein [Pyrococcus horikoshii]
           Length = 131
           
 Score =  203 bits (511), Expect = 6e-52
 Identities = 96/122 (78%), Positives = 114/122 (92%)

Query: 1   MIERLRIREELTEEQYSKVLKVIERMKSKFPTSFSRKTKTGEKISFIDTNICGGLNFDIL 60
           MIERLRIREEL EEQY+KV+ VIE++KSKFPT FSR+TKTGEKISFI+T+ICGGLNFDIL
Sbjct: 1   MIERLRIREELDEEQYTKVITVIEKLKSKFPTVFSRRTKTGEKISFIETSICGGLNFDIL 60

Query: 61  VGVREKPFVVVEVEGKKAMMAFGIMKYLLEEAGVEYSPECDGSEAYAELKKVMKAKNLFD 120
           +G RE+PFVVVEVEG+KA  AFGIMK+L+EEAGVEYSPECDG++AY ELK+++KA+NL D
Sbjct: 61  IGKRERPFVVVEVEGRKAASAFGIMKFLMEEAGVEYSPECDGNQAYFELKRLVKARNLLD 120

Query: 121 FL 122
           FL
Sbjct: 121 FL 122


  Database: ./suso.pep
    Posted date:  Jul 6, 2001  5:57 PM
  Number of letters in database: 840,471
  Number of sequences in database:  2977
  
  Database: /banques/blast2/nr.pep
    Posted date:  Dec 14, 2000 12:46 PM
  Number of letters in database: 188,266,275
  Number of sequences in database:  595,510
  
Lambda     K      H
   0.319    0.138    0.378 

Gapped
Lambda     K      H
   0.270   0.0470    0.230 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 42988061
Number of Sequences: 2977
Number of extensions: 1580512
Number of successful extensions: 4269
Number of sequences better than 1.0e-10: 2
Number of HSP's better than  0.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 4267
Number of HSP's gapped (non-prelim): 2
length of query: 127
length of database: 189,106,746
effective HSP length: 55
effective length of query: 72
effective length of database: 156,189,961
effective search space: 11245677192
effective search space used: 11245677192
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 160 (66.7 bits)