BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB1662 (PAB1662) DE:CAROTENOID BIOSYNTHETIC GENE ERWCRTS
related
(370 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||D75084 carotenoid biosynthetic gene erwcrts related PAB1662... 739 0.0
pir||D71063 hypothetical protein PH1202 - Pyrococcus horikoshii ... 668 0.0
pir||H69162 conserved hypothetical protein MTH48 - Methanobacter... 333 1e-90
sp|Q58272|Y862_METJA HYPOTHETICAL PROTEIN MJ0862 >gi|2128035|pir... 276 3e-73
gi|10803607 ORF H0660 [Halobacterium sp. NRC-1] >gi|10803696|ref... 272 5e-72
gb|AAG20768.1| (AE005145) carotenoid biosynthetic protein; Crt_1... 272 5e-72
gi|11499868 carotenoid biosynthetic gene ERWCRTS, putative [Arch... 266 4e-70
gb|AAK40424.1| FMN-dependent dehydrogenase, conserved hypothetic... 256 3e-67
sp|P95997|YC08_SULSO HYPOTHETICAL PROTEIN C05008 >gi|7444263|pir... 256 3e-67
sp|P74287|YF56_SYNY3 HYPOTHETICAL 37.5 KD PROTEIN sll1556 >gi|74... 255 7e-67
pir||C72560 hypothetical protein APE1765 - Aeropyrum pernix (str... 249 3e-65
pir||C71704 hypothetical protein RP452 - Rickettsia prowazekii >... 243 2e-63
emb|CAC11250.1| (AL445063) conserved hypothetical protein [Therm... 240 3e-62
sp|Q01335|YCR6_ERWHE HYPOTHETICAL 37.2 KD PROTEIN IN CRTE-CRTX I... 230 2e-59
gb|AAF77222.1|AC009601_16 (AC009601) L165.10 [Leishmania major] ... 215 6e-55
pir||G75437 conserved hypothetical protein - Deinococcus radiodu... 206 2e-52
pir||C70185 carotenoid biosynthesis protein homolog - Lyme disea... 194 1e-48
dbj|BAB07793.1| (AB037666) hypothetical protein [Streptomyces sp... 193 2e-48
dbj|BAB07820.1| (AB037907) hypothetical protein [Streptomyces gr... 183 2e-45
sp|P50740|YPGA_BACSU HYPOTHETICAL 22.6 KD PROTEIN IN CMK-GPSA IN... 159 5e-38
>pir||D75084 carotenoid biosynthetic gene erwcrts related PAB1662 - Pyrococcus
abyssi (strain Orsay) >gi|5458489|emb|CAB49977.1|
(AJ248286) CAROTENOID BIOSYNTHETIC GENE ERWCRTS related
[Pyrococcus abyssi]
Length = 370
Score = 739 bits (1886), Expect = 0.0
Identities = 370/370 (100%), Positives = 370/370 (100%)
Query: 1 MEEQTILRKFEHIKHCLTKNVEAHVTNGFEDVHLIHKSLPEIDKDEIDLSVKFLGRKFDY 60
MEEQTILRKFEHIKHCLTKNVEAHVTNGFEDVHLIHKSLPEIDKDEIDLSVKFLGRKFDY
Sbjct: 1 MEEQTILRKFEHIKHCLTKNVEAHVTNGFEDVHLIHKSLPEIDKDEIDLSVKFLGRKFDY 60
Query: 61 PIMITGMTGGTRKGEIAWRINRTLAQAAQELNIPLGLGSQRAMIEKPETWESYYVRDVAP 120
PIMITGMTGGTRKGEIAWRINRTLAQAAQELNIPLGLGSQRAMIEKPETWESYYVRDVAP
Sbjct: 61 PIMITGMTGGTRKGEIAWRINRTLAQAAQELNIPLGLGSQRAMIEKPETWESYYVRDVAP 120
Query: 121 DVFLVGNLGAPQFGRNAKKRYSVDEVLYAIEKIEADAIAIHMNPLQESIQPEGDTTFSGV 180
DVFLVGNLGAPQFGRNAKKRYSVDEVLYAIEKIEADAIAIHMNPLQESIQPEGDTTFSGV
Sbjct: 121 DVFLVGNLGAPQFGRNAKKRYSVDEVLYAIEKIEADAIAIHMNPLQESIQPEGDTTFSGV 180
Query: 181 LEALAEITSTIDYPVIAKETGAGVSKEVAVELEAVGVDAIDISGLGGTSWSAVEYYRTKD 240
LEALAEITSTIDYPVIAKETGAGVSKEVAVELEAVGVDAIDISGLGGTSWSAVEYYRTKD
Sbjct: 181 LEALAEITSTIDYPVIAKETGAGVSKEVAVELEAVGVDAIDISGLGGTSWSAVEYYRTKD 240
Query: 241 GEKRNLALKFWDWGIKTAISLAEVRWATNLPIIASGGMRDGITMAKALAMGASMVGIALP 300
GEKRNLALKFWDWGIKTAISLAEVRWATNLPIIASGGMRDGITMAKALAMGASMVGIALP
Sbjct: 241 GEKRNLALKFWDWGIKTAISLAEVRWATNLPIIASGGMRDGITMAKALAMGASMVGIALP 300
Query: 301 VLRPAAKGDVEGVIRIIKGYAEEIRNVMFLVGARNIKELRKVPLVITGFVREWLLQRIDL 360
VLRPAAKGDVEGVIRIIKGYAEEIRNVMFLVGARNIKELRKVPLVITGFVREWLLQRIDL
Sbjct: 301 VLRPAAKGDVEGVIRIIKGYAEEIRNVMFLVGARNIKELRKVPLVITGFVREWLLQRIDL 360
Query: 361 NSYLRARFKM 370
NSYLRARFKM
Sbjct: 361 NSYLRARFKM 370
>pir||D71063 hypothetical protein PH1202 - Pyrococcus horikoshii
>gi|3257619|dbj|BAA30302.1| (AP000005) 371aa long
hypothetical protein [Pyrococcus horikoshii]
Length = 371
Score = 668 bits (1705), Expect = 0.0
Identities = 323/368 (87%), Positives = 355/368 (95%)
Query: 2 EEQTILRKFEHIKHCLTKNVEAHVTNGFEDVHLIHKSLPEIDKDEIDLSVKFLGRKFDYP 61
EE TILRKFEHI+HCL +NVEAHV+NGFEDV+ +HKSLPEIDKDEIDL+V+FLGRKFDYP
Sbjct: 3 EELTILRKFEHIEHCLKRNVEAHVSNGFEDVYFVHKSLPEIDKDEIDLTVEFLGRKFDYP 62
Query: 62 IMITGMTGGTRKGEIAWRINRTLAQAAQELNIPLGLGSQRAMIEKPETWESYYVRDVAPD 121
IMITGMTGGTR+ EIA +INRTLA AA+ELNIP G+GSQRAMIEKPETWESYYVRDVAPD
Sbjct: 63 IMITGMTGGTRREEIAGKINRTLAMAAEELNIPFGVGSQRAMIEKPETWESYYVRDVAPD 122
Query: 122 VFLVGNLGAPQFGRNAKKRYSVDEVLYAIEKIEADAIAIHMNPLQESIQPEGDTTFSGVL 181
+FL+GNLGAPQFG+NAKKRYSV EVLYAIEKIEADAIAIHMNPLQES+QPEGDTT++GVL
Sbjct: 123 IFLIGNLGAPQFGKNAKKRYSVKEVLYAIEKIEADAIAIHMNPLQESVQPEGDTTYAGVL 182
Query: 182 EALAEITSTIDYPVIAKETGAGVSKEVAVELEAVGVDAIDISGLGGTSWSAVEYYRTKDG 241
EALAEI S+I+YPVIAKETGAGVSKEVA+ELE+VG+DAIDISGLGGTSWSAVEYYR KD
Sbjct: 183 EALAEIKSSINYPVIAKETGAGVSKEVAIELESVGIDAIDISGLGGTSWSAVEYYRAKDS 242
Query: 242 EKRNLALKFWDWGIKTAISLAEVRWATNLPIIASGGMRDGITMAKALAMGASMVGIALPV 301
EKR +ALKFWDWGIKTAISLAEVRWATNLPIIASGGMRDG+ MAKALAMGAS+VGIALPV
Sbjct: 243 EKRKIALKFWDWGIKTAISLAEVRWATNLPIIASGGMRDGVMMAKALAMGASLVGIALPV 302
Query: 302 LRPAAKGDVEGVIRIIKGYAEEIRNVMFLVGARNIKELRKVPLVITGFVREWLLQRIDLN 361
LRPAA+GDVEGV+RII+GYAEEI+NVMFLVGARNI+ELR+VPLVITGFVREWLLQRIDLN
Sbjct: 303 LRPAARGDVEGVVRIIRGYAEEIKNVMFLVGARNIRELRRVPLVITGFVREWLLQRIDLN 362
Query: 362 SYLRARFK 369
SYLR+RFK
Sbjct: 363 SYLRSRFK 370
>pir||H69162 conserved hypothetical protein MTH48 - Methanobacterium
thermoautotrophicum (strain Delta H)
>gi|2621084|gb|AAB84555.1| (AE000797) conserved protein
[Methanobacterium thermoautotrophicum]
Length = 349
Score = 333 bits (846), Expect = 1e-90
Identities = 172/351 (49%), Positives = 240/351 (68%), Gaps = 18/351 (5%)
Query: 8 RKFEHIKHCLTKNVEAHVTNGFEDVHLIHKSLPEIDKDEIDLSVKFLGRKFDYPIMITGM 67
RK EH+ C + +VE GFED+ ++H+++PEI+K++ID+S+ FLGR+ P+MI+ +
Sbjct: 5 RKLEHLILCASCDVEYRKKTGFEDIEIVHRAIPEINKEKIDISLDFLGRELSSPVMISAI 64
Query: 68 TGGTRKGEIAWRINRTLAQAAQELNIPLGLGSQRAMIEKPETWESYYV-RDVAPDVFLVG 126
TGG + +INR LA+AA++L I LGLGSQRA +E PE +Y + R+ AP L+G
Sbjct: 65 TGGH---PASMKINRELARAAEKLGIALGLGSQRAGVEHPELEGTYTIAREEAPSAMLIG 121
Query: 127 NLGAPQFGRNAKKRYSVDEVLYAIEKIEADAIAIHMNPLQESIQPEGDTTFSGVLEALAE 186
N+G+ ++ A+E I+ADA+A+H+NPLQESIQP GD SG LE+++
Sbjct: 122 NIGSSH----------IEYAERAVEMIDADALAVHLNPLQESIQPGGDVDSSGALESISA 171
Query: 187 ITSTIDYPVIAKETGAGVSKEVAVELEAVGVDAIDISGLGGTSWSAVEYYRTKDGEKRNL 246
I ++D PV+ KETGAG+ E A+ELE+ GV AID++G GGTSW+AVE YR D R L
Sbjct: 172 IVESVDVPVMVKETGAGICSEDAIELESCGVSAIDVAGAGGTSWAAVETYRADD---RYL 228
Query: 247 ALKFWDWGIKTAISLAEVRWATNLPIIASGGMRDGITMAKALAMGASMVGIALPVLRPAA 306
FWDWGI TA S EV + ++P+IASGG+R GI AKA+++GA MVGIALPVL A
Sbjct: 229 GELFWDWGIPTAASTVEVVESVSIPVIASGGIRSGIDAAKAISLGAEMVGIALPVLEAAG 288
Query: 307 KGDVEGVIRIIKGYAEEIRNVMFLVGARNIKELRKVPLVITGFVREWLLQR 357
G E VI++I+G+ E +R M+L GA + +L+K P++ITG EWL QR
Sbjct: 289 HGYRE-VIKVIEGFNEALRTAMYLAGAETLDDLKKSPVIITGHTGEWLNQR 338
>sp|Q58272|Y862_METJA HYPOTHETICAL PROTEIN MJ0862 >gi|2128035|pir||F64407 carotenoid
biosynthesis protein homolog - Methanococcus jannaschii
>gi|1591547|gb|AAB98867.1| (U67530) carotenoid
biosynthetic gene ERWCRTS isolog [Methanococcus
jannaschii]
Length = 359
Score = 276 bits (698), Expect = 3e-73
Identities = 156/358 (43%), Positives = 227/358 (62%), Gaps = 15/358 (4%)
Query: 7 LRKFEHIKHCLTKNVEAHVTNGFEDVHLIHKSLPEIDKDEIDLSVKFLGRKFDYPIMITG 66
+RK EHI C NVE T ED+ LIHK I+ ++I+ ++ G+K PI+++G
Sbjct: 10 VRKLEHIFLCSYCNVEYEKTTLLEDIELIHKGTCGINFNDIETEIELFGKKLSAPIIVSG 69
Query: 67 MTGGTRKGEIAWRINRTLAQAAQELNIPLGLGSQRAMIEKPETWESY-YVRDVAPDVFLV 125
MTGG K + IN+ +A+A +EL + +G+GSQRA I E ++Y VRD ++ ++
Sbjct: 70 MTGGHSKAK---EINKNIAKAVEELGLGMGVGSQRAAIVNDELIDTYSIVRDYTNNL-VI 125
Query: 126 GNLGAPQFGRNAKKRYSVDEVLYAIEKIEADAIAIHMNPLQESIQPEGDTTFSGVLEALA 185
GNLGA F + +D+ AIE I+ADAIAIH NPLQE IQPEGD F + + L
Sbjct: 126 GNLGAVNFIVDDWDEEIIDK---AIEMIDADAIAIHFNPLQEIIQPEGDLNFKNLYK-LK 181
Query: 186 EITSTI-----DYPVIAKETGAGVSKEVAVELEAVGVDAIDISGLGGTSWSAVEYYRTKD 240
EI S + P IAK+ G G SKE A+ L+ +G DAID+ G GGTSW+ VE YR K+
Sbjct: 182 EIISNYKKSYKNIPFIAKQVGEGFSKEDALILKDIGFDAIDVQGSGGTSWAKVEIYRVKE 241
Query: 241 GEKRNLALKFWDWGIKTAISLAEVRWATNLPIIASGGMRDGITMAKALAMGASMVGIALP 300
E + LA KF +WGI TA S+ EV+ + +I SGG+R G+ +AK +A+G +ALP
Sbjct: 242 EEIKRLAEKFANWGIPTAASIFEVKSVYDGIVIGSGGIRGGLDIAKCIAIGCDCCSVALP 301
Query: 301 VLRPAAKGDVEGVIRIIKGYAEEIRNVMFLVGARNIKELRKVPLVITGFVREWLLQRI 358
+L+ + KG E V+++++ Y +E++ MFLVGA NI+EL+K ++ G ++EW+ QR+
Sbjct: 302 ILKASLKG-WEEVVKVLESYIKELKIAMFLVGAENIEELKKTSYIVKGTLKEWISQRL 358
>gi|10803607 ORF H0660 [Halobacterium sp. NRC-1] >gi|10803696|ref|NP_046094.1|
ORF H1696 [Halobacterium sp. NRC-1]
>gi|7444262|pir||T08277 carotenoid biosynthesis protein
homolog H0660 - Halobacterium sp. (strain NRC-1) plasmid
pNRC100 >gi|2822338|gb|AAC82844.1| (AF016485) ORF H0660
[Halobacterium sp. NRC-1] >gi|2822427|gb|AAC82933.1|
(AF016485) ORF H1696 [Halobacterium sp. NRC-1]
Length = 379
Score = 272 bits (688), Expect = 5e-72
Identities = 159/360 (44%), Positives = 219/360 (60%), Gaps = 17/360 (4%)
Query: 4 QTILRKFEHIKHCLTKNVEAHVTNGFEDVHLIHKSLPEIDKDEIDLSVKFLGRKFDYPIM 63
QT RK +H++ ++VE T GF+DVHL+H +LPE+D D ID S+ FLG PI
Sbjct: 27 QTEDRKDDHLQIVQERDVETTGT-GFDDVHLVHNALPELDYDAIDPSIDFLGHDLSAPIF 85
Query: 64 ITGMTGGTRKGEIAWRINRTLAQAAQELNIPLGLGSQRAMIEKPE--TWESY-YVRDVAP 120
I MTGG INR LA+AA E I +GLGSQRA +E + ESY VRD AP
Sbjct: 86 IESMTGGHHN---TTEINRALARAASETGIAMGLGSQRAGLELDDERVLESYTVVRDAAP 142
Query: 121 DVFLVGNLGAPQFGRNAKKRYSVDEVLYAIEKIEADAIAIHMNPLQESIQPEGDTTFSGV 180
D F+ GNLGA Q + Y ++ V A+E I+ADA+A+H+N LQE+ QPEGD
Sbjct: 143 DAFIYGNLGAAQL-----REYDIEMVEQAVEMIDADALAVHLNFLQEATQPEGDVDGRNC 197
Query: 181 LEALAEITSTIDYPVIAKETGAGVSKEVAVELEAVGVDAIDISGLGGTSWSAVEYYRTKD 240
+ A+ ++ + P+I KETG G+S E A EL A GVDA+D++G GGT+WS +E YR
Sbjct: 198 VAAIERVSEALSVPIIVKETGNGISGETARELTAAGVDALDVAGKGGTTWSGIEAYRAAA 257
Query: 241 G---EKRNLALKFWDWGIKTAISLAEVRWATNLPIIASGGMRDGITMAKALAMGASMVGI 297
++ + F +WGI TA S E A + +IASGG+R G+ +AKA+A+GA G+
Sbjct: 258 ANAPRQKQIGTLFREWGIPTAASTIEC-VAEHDCVIASGGVRTGLDVAKAIALGARAGGL 316
Query: 298 ALPVLRPAAKGDVEGVIRIIKGYAEEIRNVMFLVGARNIKELRKVPLVITGFVREWLLQR 357
A P L+PA G + VI + E+R MF+ G+ +I EL++V V+ G RE++ QR
Sbjct: 317 AKPFLKPATDGP-DAVIERVGDLIAELRTAMFVTGSGSIDELQQVEYVLHGKTREYVEQR 375
>gb|AAG20768.1| (AE005145) carotenoid biosynthetic protein; Crt_1 [Halobacterium
sp. NRC-1] >gi|10584461|gb|AAG21040.1| (AE005169)
carotenoid biosynthetic protein; Crt_2 [Halobacterium
sp. NRC-1]
Length = 360
Score = 272 bits (688), Expect = 5e-72
Identities = 159/360 (44%), Positives = 219/360 (60%), Gaps = 17/360 (4%)
Query: 4 QTILRKFEHIKHCLTKNVEAHVTNGFEDVHLIHKSLPEIDKDEIDLSVKFLGRKFDYPIM 63
QT RK +H++ ++VE T GF+DVHL+H +LPE+D D ID S+ FLG PI
Sbjct: 8 QTEDRKDDHLQIVQERDVETTGT-GFDDVHLVHNALPELDYDAIDPSIDFLGHDLSAPIF 66
Query: 64 ITGMTGGTRKGEIAWRINRTLAQAAQELNIPLGLGSQRAMIEKPE--TWESY-YVRDVAP 120
I MTGG INR LA+AA E I +GLGSQRA +E + ESY VRD AP
Sbjct: 67 IESMTGGHHN---TTEINRALARAASETGIAMGLGSQRAGLELDDERVLESYTVVRDAAP 123
Query: 121 DVFLVGNLGAPQFGRNAKKRYSVDEVLYAIEKIEADAIAIHMNPLQESIQPEGDTTFSGV 180
D F+ GNLGA Q + Y ++ V A+E I+ADA+A+H+N LQE+ QPEGD
Sbjct: 124 DAFIYGNLGAAQL-----REYDIEMVEQAVEMIDADALAVHLNFLQEATQPEGDVDGRNC 178
Query: 181 LEALAEITSTIDYPVIAKETGAGVSKEVAVELEAVGVDAIDISGLGGTSWSAVEYYRTKD 240
+ A+ ++ + P+I KETG G+S E A EL A GVDA+D++G GGT+WS +E YR
Sbjct: 179 VAAIERVSEALSVPIIVKETGNGISGETARELTAAGVDALDVAGKGGTTWSGIEAYRAAA 238
Query: 241 G---EKRNLALKFWDWGIKTAISLAEVRWATNLPIIASGGMRDGITMAKALAMGASMVGI 297
++ + F +WGI TA S E A + +IASGG+R G+ +AKA+A+GA G+
Sbjct: 239 ANAPRQKQIGTLFREWGIPTAASTIEC-VAEHDCVIASGGVRTGLDVAKAIALGARAGGL 297
Query: 298 ALPVLRPAAKGDVEGVIRIIKGYAEEIRNVMFLVGARNIKELRKVPLVITGFVREWLLQR 357
A P L+PA G + VI + E+R MF+ G+ +I EL++V V+ G RE++ QR
Sbjct: 298 AKPFLKPATDGP-DAVIERVGDLIAELRTAMFVTGSGSIDELQQVEYVLHGKTREYVEQR 356
>gi|11499868 carotenoid biosynthetic gene ERWCRTS, putative [Archaeoglobus
fulgidus] >gi|7444261|pir||G69535 carotenoid
biosynthetic protein ERWCRTS homolog - Archaeoglobus
fulgidus >gi|2648236|gb|AAB88970.1| (AE000947)
carotenoid biosynthetic gene ERWCRTS, putative
[Archaeoglobus fulgidus]
Length = 317
Score = 266 bits (672), Expect = 4e-70
Identities = 141/322 (43%), Positives = 208/322 (63%), Gaps = 12/322 (3%)
Query: 34 LIHKSLPEIDKDEIDLSVKFLGRKFDYPIMITGMTGGTRKGEIAWRINRTLAQAAQELNI 93
LIHK+LPE+D +ID ++F G+K +P++I MTGG + + IN L +A +E I
Sbjct: 3 LIHKALPEVDYWKIDTEIEFFGKKLSFPLLIASMTGGHPETK---EINARLGEAVEEAGI 59
Query: 94 PLGLGSQRAMIEKPETWESY-YVRDVAPDVFLVGNLGAPQFGRNAKKRYSVDEVLYAIEK 152
+G+GSQRA IE +S+ VR+ AP+ F+ N+G PQ V+ V A+E
Sbjct: 60 GMGVGSQRAAIEDESLADSFTVVREKAPNAFVYANIGMPQVIERG-----VEIVDRAVEM 114
Query: 153 IEADAIAIHMNPLQESIQPEGDTTFSGVLEALAEITSTIDYPVIAKETGAGVSKEVAVEL 212
I+ADA+AIH+N LQE+IQPEGD LE L E+ ++ PVIAKETGAG+S+EVAV L
Sbjct: 115 IDADAVAIHLNYLQEAIQPEGDLNAEKGLEVLEEVCRSVKVPVIAKETGAGISREVAVML 174
Query: 213 EAVGVDAIDISGLGGTSWSAVEYYRTKDGEKRNLALKFWDWGIKTAISLAEVRWATNLPI 272
+ GV AID+ G GGT++S VE YR D +++ + FWDWG+ TA S+ + R LP+
Sbjct: 175 KRAGVSAIDVGGKGGTTFSGVEVYRVNDEVSKSVGIDFWDWGLPTAFSIVDCRGI--LPV 232
Query: 273 IASGGMRDGITMAKALAMGASMVGIALPVLRPAAKGDVEGVIRIIKGYAEEIRNVMFLVG 332
IA+GG+R G+ +AK++A+GA + ALP LR AA E V I+ + ++ MFL G
Sbjct: 233 IATGGLRSGLDVAKSIAIGAELGSAALPFLR-AAVESAEKVREEIEYFRRGLKTAMFLTG 291
Query: 333 ARNIKELRKVPLVITGFVREWL 354
+N++EL+ + + ++G ++EW+
Sbjct: 292 CKNVEELKGLKVFVSGRLKEWI 313
>gb|AAK40424.1| FMN-dependent dehydrogenase, conserved hypothetical [Sulfolobus
solfataricus]
Length = 368
Score = 256 bits (647), Expect = 3e-67
Identities = 150/367 (40%), Positives = 223/367 (59%), Gaps = 15/367 (4%)
Query: 8 RKFEHIKHCLTKNVEAHVTNGF-EDVHLIHKSLPEIDKDEIDLSVKFLGRKFDYPIMITG 66
RK EH++ +NV+ ++ F DV L+H+ P I EI+ KF ++ PIM+TG
Sbjct: 7 RKVEHVEIAAFENVDGLSSSTFLNDVILVHQGFPGISFSEINTKTKFFRKEISAPIMVTG 66
Query: 67 MTGGTRKGEIAWRINRTLAQAAQELNIPLGLGSQRAMIEKPETWESY-YVRDVAPDVFLV 125
MTGG + E+ RINR +A+ A++ IP+G+GSQR IEK E ES+ VR VAP + ++
Sbjct: 67 MTGG--RNELG-RINRIIAEVAEKFGIPMGVGSQRVAIEKAEARESFTIVRKVAPTIPII 123
Query: 126 GNLGAPQFGRNAKKRYSVDEVLYAIEKIEADAIAIHMNPLQESIQPEGDTTFS-GVLEAL 184
NLG PQ K Y + E AI+ IEADAIA+H+NP QE QPEG+ + LE L
Sbjct: 124 ANLGMPQL----VKGYGLKEFQDAIQMIEADAIAVHLNPAQEVFQPEGEPEYQIYALERL 179
Query: 185 AEITSTIDYPVIAKETGAGVSKEVAVELEAVGVDAIDISGLGGTSWSAVEYYR--TKDGE 242
+I+ + P+I KE+G G+S E A L + G+ D SG GGT+W A+E R +
Sbjct: 180 RDISKELSVPIIVKESGNGISMETAKLLYSYGIKNFDTSGQGGTNWIAIEMIRDIRRGNW 239
Query: 243 KRNLALKFWDWGIKTAISLAEVRWA-TNLPIIASGGMRDGITMAKALAMGASMVGIALPV 301
K A F DWG+ TA S+ EVR++ + ++ SGG+R G+ AKA+A+GA + G+ALPV
Sbjct: 240 KAESAKNFLDWGVPTAASIIEVRYSIPDAFLVGSGGIRSGLDAAKAIALGADIAGMALPV 299
Query: 302 LRPAAKGDVEGVIRIIKGYAEEIRNVMFLVGARNIKELRKVPLVITGFVREWLLQR-IDL 360
L+ A +G E + + + E++ M L G++N++ L++ +VI G ++EW R I+L
Sbjct: 300 LKSAIEGK-ESLEQFFRKIIFELKATMMLTGSKNVEALKRSSIVILGKLKEWAEYRGINL 358
Query: 361 NSYLRAR 367
+ Y + R
Sbjct: 359 SIYEKVR 365
>sp|P95997|YC08_SULSO HYPOTHETICAL PROTEIN C05008 >gi|7444263|pir||S75425 hypothetical
protein c05008 - Sulfolobus solfataricus
>gi|1707831|emb|CAA69539.1| (Y08257) carotenoid
biosynthetic gene ERWCRTS homolog [Sulfolobus
solfataricus]
Length = 368
Score = 256 bits (647), Expect = 3e-67
Identities = 150/367 (40%), Positives = 223/367 (59%), Gaps = 15/367 (4%)
Query: 8 RKFEHIKHCLTKNVEAHVTNGF-EDVHLIHKSLPEIDKDEIDLSVKFLGRKFDYPIMITG 66
RK EH++ +NV+ ++ F DV L+H+ P I EI+ KF ++ PIM+TG
Sbjct: 7 RKVEHVEIAAFENVDGLSSSTFLNDVILVHQGFPGISFSEINTKTKFFRKEISAPIMVTG 66
Query: 67 MTGGTRKGEIAWRINRTLAQAAQELNIPLGLGSQRAMIEKPETWESY-YVRDVAPDVFLV 125
MTGG + E+ RINR +A+ A++ IP+G+GSQR IEK E ES+ VR VAP + ++
Sbjct: 67 MTGG--RNELG-RINRIIAEVAEKFGIPMGVGSQRVAIEKAEARESFTIVRKVAPTIPII 123
Query: 126 GNLGAPQFGRNAKKRYSVDEVLYAIEKIEADAIAIHMNPLQESIQPEGDTTFS-GVLEAL 184
NLG PQ K Y + E AI+ IEADAIA+H+NP QE QPEG+ + LE L
Sbjct: 124 ANLGMPQL----VKGYGLKEFQDAIQMIEADAIAVHLNPAQEVFQPEGEPEYQIYALERL 179
Query: 185 AEITSTIDYPVIAKETGAGVSKEVAVELEAVGVDAIDISGLGGTSWSAVEYYR--TKDGE 242
+I+ + P+I KE+G G+S E A L + G+ D SG GGT+W A+E R +
Sbjct: 180 RDISKELSVPIIVKESGNGISMETAKLLYSYGIKNFDTSGQGGTNWIAIEMIRDIRRGNW 239
Query: 243 KRNLALKFWDWGIKTAISLAEVRWA-TNLPIIASGGMRDGITMAKALAMGASMVGIALPV 301
K A F DWG+ TA S+ EVR++ + ++ SGG+R G+ AKA+A+GA + G+ALPV
Sbjct: 240 KAESAKNFLDWGVPTAASIIEVRYSIPDAFLVGSGGIRSGLDAAKAIALGADIAGMALPV 299
Query: 302 LRPAAKGDVEGVIRIIKGYAEEIRNVMFLVGARNIKELRKVPLVITGFVREWLLQR-IDL 360
L+ A +G E + + + E++ M L G++N++ L++ +VI G ++EW R I+L
Sbjct: 300 LKSAIEGK-ESLEQFFRKIIFELKATMMLTGSKNVEALKRSSIVILGKLKEWAEYRGINL 358
Query: 361 NSYLRAR 367
+ Y + R
Sbjct: 359 SIYEKVR 365
>sp|P74287|YF56_SYNY3 HYPOTHETICAL 37.5 KD PROTEIN sll1556 >gi|7429104|pir||S75922
hypothetical protein sll1556 - Synechocystis sp. (strain
PCC 6803) >gi|1653467|dbj|BAA18381.1| (D90913)
hypothetical protein [Synechocystis sp.]
Length = 349
Score = 255 bits (644), Expect = 7e-67
Identities = 145/344 (42%), Positives = 209/344 (60%), Gaps = 10/344 (2%)
Query: 3 EQTILRKFEHIKHCLTKNVEAH-VTNGFEDVHLIHKSLPEIDKDEIDLSVKFLGRKFDYP 61
+ T RK +HI+ L ++V ++ GFE + L H +LP +D D +DL + G+ YP
Sbjct: 2 DSTPHRKSDHIRIVLEEDVVGKGISTGFERLMLEHCALPAVDLDAVDLGLTLWGKSLTYP 61
Query: 62 IMITGMTGGTRKGEIAWRINRTLAQAAQELNIPLGLGSQRAMIEKPETWESYYVRDVAPD 121
+I+ MTGGT + + +IN LA+ AQ L I +GLGSQRA IE P+ +Y VR VAPD
Sbjct: 62 WLISSMTGGTPEAK---QINLFLAEVAQALGIAMGLGSQRAAIENPDLAFTYQVRSVAPD 118
Query: 122 VFLVGNLGAPQFGRNAKKRYSVDEVLYAIEKIEADAIAIHMNPLQESIQPEGDTTFSGVL 181
+ L NLG Q Y +++ A++ IEADA+ +H+NPLQE++QP+GD +SG+
Sbjct: 119 ILLFANLGLVQLNYG----YGLEQAQRAVDMIEADALILHLNPLQEAVQPDGDRLWSGLW 174
Query: 182 EALAEITSTIDYPVIAKETGAGVSKEVAVELEAVGVDAIDISGLGGTSWSAVEYYRTKDG 241
L + ++ PVI KE G G+S VA L+ GV AID++G GGTSWS VE +R D
Sbjct: 175 SKLEALVEALEVPVIVKEVGNGISGPVAKRLQECGVGAIDVAGAGGTSWSEVEAHRQTDR 234
Query: 242 EKRNLALKFWDWGIKTAISLAEVRWAT-NLPIIASGGMRDGITMAKALAMGASMVGIALP 300
+ + +A F DWG+ TA SL +V T + + ASGG+R GI AKA+A+GA++VG A P
Sbjct: 235 QAKEVAHNFADWGLPTAWSLQQVVQNTEQILVFASGGIRSGIDGAKAIALGATLVGSAAP 294
Query: 301 VLRPAAKGDVEGVIRIIKGYAEEIRNVMFLVGARNIKELRKVPL 344
VL AK + + V + E++ F A N+ +L +VPL
Sbjct: 295 VL-AEAKINAQRVYDHYQARLRELQIAAFCCDAANLTQLAQVPL 337
>pir||C72560 hypothetical protein APE1765 - Aeropyrum pernix (strain K1)
>gi|5105455|dbj|BAA80768.1| (AP000062) 361aa long
hypothetical protein [Aeropyrum pernix]
Length = 361
Score = 249 bits (630), Expect = 3e-65
Identities = 136/339 (40%), Positives = 203/339 (59%), Gaps = 10/339 (2%)
Query: 17 LTKNVEAHVTNGFEDVHLIHKSLPEIDKDEIDLSVKFLGRKFDYPIMITGMTGGTRKGEI 76
++ VE+ + E V ++H PE++ ++ L + F G + P++ITGMTGG ++
Sbjct: 3 VSSKVESRESTLLEYVRIVHNPTPEVNLGDVSLEIDFCGGRLRAPLVITGMTGG--HPDV 60
Query: 77 AWRINRTLAQAAQELNIPLGLGSQRAMIEKPETWESYYV-RDVAPDVFLVGNLGAPQFGR 135
W INR LA A+EL I +G+GSQRA IE P ++ R+ AP+ FL+ NLGAPQ
Sbjct: 61 EW-INRELASVAEELGIAIGVGSQRAAIEDPSLARTFRAAREAAPNAFLIANLGAPQLSL 119
Query: 136 NAKKRYSVDEVLYAIEKIEADAIAIHMNPLQESIQPEGDTTFSGVLEALAEITSTIDYPV 195
YSV EV A+E I+ADAIAIH+NP QE+ QPEGD + GV+ +AE PV
Sbjct: 120 G----YSVREVRMAVEMIDADAIAIHLNPGQEAYQPEGDPFYRGVVGKIAEAAEAAGVPV 175
Query: 196 IAKETGAGVSKEVAVELEAVGVDAIDISGLGGTSWSAVEYYRTKDGEKRNLALKFWD-WG 254
I KETG G+S+E +L A+GV D++GLGGT+W +E R + A D WG
Sbjct: 176 IVKETGNGLSREAVAQLRALGVRCFDVAGLGGTNWIKIEVLRGRKAGSPLEAGPLQDFWG 235
Query: 255 IKTAISLAEVRWAT-NLPIIASGGMRDGITMAKALAMGASMVGIALPVLRPAAKGDVEGV 313
TA +L E R A + IIASGG+R+G+ A+A+A+GA G+ALP +R G +
Sbjct: 236 NPTAAALMEARTAAPDAYIIASGGVRNGLDAARAIALGADAAGVALPAIRSLLSGGRQAT 295
Query: 314 IRIIKGYAEEIRNVMFLVGARNIKELRKVPLVITGFVRE 352
++++K +++ +++VG ++ L + P+V+ G + E
Sbjct: 296 LKLLKAIEYQLKTAVYMVGETRVRGLWRAPIVVWGRLAE 334
>pir||C71704 hypothetical protein RP452 - Rickettsia prowazekii
>gi|3861009|emb|CAA14909.1| (AJ235271) unknown
[Rickettsia prowazekii]
Length = 342
Score = 243 bits (614), Expect = 2e-63
Identities = 139/341 (40%), Positives = 209/341 (60%), Gaps = 9/341 (2%)
Query: 6 ILRKFEHIKHCLTKNVEAHVTNGFEDVHLIHKSLPEIDKDEIDLSVKFLGRKFDYPIMIT 65
I RK EHI+ L +NV + + +G E + IH +LPEI+ D ID + FLG+ PI+I+
Sbjct: 9 IERKQEHIEINLKQNVNSTLKSGLESIKFIHNALPEINYDSIDTTTTFLGKDMKAPILIS 68
Query: 66 GMTGGTRKGEIAWRINRTLAQAAQELNIPLGLGSQRAMIEKPETWESYYVRDVAPDVFLV 125
MTGGT + A IN LAQAAQ+ I +GLGS R ++ KP+T +++ VR VAPD+ L+
Sbjct: 69 SMTGGTAR---ARDINYRLAQAAQKSGIAMGLGSMRILLTKPDTIKTFTVRHVAPDIPLL 125
Query: 126 GNLGAPQFGRNAKKRYSVDEVLYAIEKIEADAIAIHMNPLQESIQPEGDTTFSGVLEALA 185
N+GA Q + E Y I+ I+ADA+ +H+N L E QPEG+ + +L +
Sbjct: 126 ANIGAVQLNYGVTPK----ECQYLIDTIKADALILHLNVLHELTQPEGNKNWENLLPKIK 181
Query: 186 EITSTIDYPVIAKETGAGVSKEVAVELEAVGVDAIDISGLGGTSWSAVEYYRTKDGEKRN 245
E+ + + PVI KE G G+SK+VA +L GV +DI+G GGTSWS VE YR K+ +
Sbjct: 182 EVINYLSVPVIVKEVGYGLSKQVAKKLIKAGVKVLDIAGSGGTSWSQVEAYRAKNSMQNR 241
Query: 246 LALKFWDWGIKTAISLAEVR-WATNLPIIASGGMRDGITMAKALAMGASMVGIALPVLRP 304
+A F +WGI T SL ++ + ++ IIASGG++ GI AKA+ MGA++ G+A +L+
Sbjct: 242 IASSFINWGITTLDSLKMLQEISKDITIIASGGLQSGIDGAKAIRMGANIFGLAGKLLKA 301
Query: 305 AAKGDVEGVIRIIKGYAEEIRNVMFLVGARNIKELRKVPLV 345
A + V+ I+ E+++ M G+ +K+L K ++
Sbjct: 302 ADIAE-SLVLEEIQVIIEQLKITMLCTGSCTLKDLAKAEIM 341
>emb|CAC11250.1| (AL445063) conserved hypothetical protein [Thermoplasma
acidophilum]
Length = 348
Score = 240 bits (605), Expect = 3e-62
Identities = 141/351 (40%), Positives = 216/351 (61%), Gaps = 14/351 (3%)
Query: 8 RKFEHIKHCLTKNVEAHVTNGFEDVHLIHKSLPEIDKDEIDLSVKFLGRKFDYPIMITGM 67
RK EHI+ ++V + N ++D+ L+H++ PE++ DEID SV FLG+K +P++I+ M
Sbjct: 5 RKEEHIRIAENEDVSSF-HNFWDDISLMHEADPEVNYDEIDTSVDFLGKKLKFPMIISSM 63
Query: 68 TGGTRKGEIAWRINRTLAQAAQELNIPLGLGSQRAMIEKPETWESYYVRDVAPDVFLVGN 127
TGG EIA INR LA AA+ I +G+GS RA I ++Y V + + + N
Sbjct: 64 TGGA---EIAKNINRNLAVAAERFGIGMGVGSMRAAIVDRSIEDTYSVINESHVPLKIAN 120
Query: 128 LGAPQFGRNAKKRYSVDEVLYAIEKIEADAIAIHMNPLQESIQPEGDTTFSGVLEALAEI 187
+GAPQ R K S ++ Y + I+AD +A+H N LQE +QPEGD GV++ + ++
Sbjct: 121 IGAPQLVRQDKDAVSNRDIAYIYDLIKADFLAVHFNFLQEMVQPEGDRNSKGVIDRIKDL 180
Query: 188 TSTIDYPVIAKETGAGVSKEVAVELEAVGVDAIDISGLGGTSWSAVEYYRTK---DGEKR 244
+ + + +IAKETG+G S+ A L GV AI++SG+ GT+++AVEYYR + + EK
Sbjct: 181 SGS--FNIIAKETGSGFSRRTAERLIDAGVKAIEVSGVSGTTFAAVEYYRARKENNLEKM 238
Query: 245 NLALKFWDWGIKTAISLAEVRWATNL-PIIASGGMRDGITMAKALAMGASMVGIALPVLR 303
+ FW+WGI S A V + ++L P+I SGG+R+G+ +AKA+AMGA+ G A +L+
Sbjct: 239 RIGETFWNWGIP---SPASVYYCSDLAPVIGSGGLRNGLDLAKAIAMGATAGGFARSLLK 295
Query: 304 PAAKGDVEGVIRIIKGYAEEIRNVMFLVGARNIKELRKVPLVITGFVREWL 354
A D E +++ I+ E R +FL G +N+ EL+ VI +R WL
Sbjct: 296 D-ADTDPEMLMKNIELIQREFRVALFLTGNKNVYELKFTKKVIVDPLRSWL 345
>sp|Q01335|YCR6_ERWHE HYPOTHETICAL 37.2 KD PROTEIN IN CRTE-CRTX INTERGENIC REGION (ORF6)
>gi|1073298|pir||S52979 hypothetical protein 6 - Erwinia
herbicola >gi|148409|gb|AAA64978.1| (M87280) gene not
found in Erwinia uredovora crt gene cluster; ORF6
[Erwinia herbicola]
Length = 347
Score = 230 bits (581), Expect = 2e-59
Identities = 137/346 (39%), Positives = 201/346 (57%), Gaps = 11/346 (3%)
Query: 2 EEQTILRKFEHIKHCLT-KNVEAHVTNGFEDVHLIHKSLPEIDKDEIDLSVKFLGRKFDY 60
+E+ + RK +H+ L + + GFE H +LPE++ +I L FL R+
Sbjct: 3 DERLVQRKNDHLDIVLDPRRAVTQASAGFERWRFTHCALPELNFSDITLETTFLNRQLQA 62
Query: 61 PIMITGMTGGTRKGEIAWRINRTLAQAAQELNIPLGLGSQRAMIEKPETWE-SYYVRDVA 119
P++I+ MTGG + INR LA+AAQ L I +G+GSQR IE +R +A
Sbjct: 63 PLLISSMTGGVERSR---HINRHLAEAAQVLKIAMGVGSQRVAIESDAGLGLDKTLRQLA 119
Query: 120 PDVFLVGNLGAPQFGRNAKKRYSVDEVLYAIEKIEADAIAIHMNPLQESIQPEGDTTFSG 179
PDV L+ NLGA Q R +D A+E IEADA+ +H+NPLQE++QP GD + G
Sbjct: 120 PDVPLLANLGAAQL----TGRKGIDYARRAVEMIEADALIVHLNPLQEALQPGGDRDWRG 175
Query: 180 VLEALAEITSTIDYPVIAKETGAGVSKEVAVELEAVGVDAIDISGLGGTSWSAVEYYRTK 239
L A+ + + P++ KE GAG+S+ VA +L GV ID++G GGTSW+AVE R
Sbjct: 176 RLAAIETLVRELPVPLVVKEVGAGISRTVAGQLIDAGVTVIDVAGAGGTSWAAVEGERAA 235
Query: 240 DGEKRNLALKFWDWGIKTAISLAEVRWA-TNLPIIASGGMRDGITMAKALAMGASMVGIA 298
++R++A F DWGI TA +L ++ A +P+IASGG+++G+ AKAL +GA MVG A
Sbjct: 236 TEQQRSVANVFADWGIPTAEALVDIAEAWPQMPLIASGGIKNGVDAAKALRLGACMVGQA 295
Query: 299 LPVLRPAAKGDVEGVIRIIKGYAEEIRNVMFLVGARNIKELRKVPL 344
VL A E VI E++R F G+R++ +L++ +
Sbjct: 296 AAVLGSAGV-STEKVIDHFNVIIEQLRVACFCTGSRSLSDLKQADI 340
>gb|AAF77222.1|AC009601_16 (AC009601) L165.10 [Leishmania major]
>gi|9864748|gb|AAG01358.1|AC068666_5 (AC068666) L165.10
[Leishmania major]
Length = 357
Score = 215 bits (542), Expect = 6e-55
Identities = 128/347 (36%), Positives = 192/347 (54%), Gaps = 14/347 (4%)
Query: 8 RKFEHIKHCLTKNVEAHV--TNGFEDVHLIHKSLPEIDKDEIDLSVKFLGRKFDYPIMIT 65
RK +HI CL ++VE H T+ + L +K+LPE+D +ID S +F+G++ +P I+
Sbjct: 17 RKKDHIDICLHQDVEPHKRRTSIWNKYTLPYKALPEVDLQKIDTSCEFMGKRISFPFFIS 76
Query: 66 GMTGGTRKGEIAWRINRTLAQAAQELNIPLGLGSQRAMIEKPETWESYYVRDVAPDVFLV 125
MTGG G + IN LA+A + IP GLGS R + ++ V++ P V ++
Sbjct: 77 SMTGGEAHGRV---INENLAKACEAEKIPFGLGSMRIINRYASAVHTFNVKEFCPSVPML 133
Query: 126 GNLGAPQFGRNAKKRYSVDEVLYAIEKIEADAIAIHMNPLQESIQPEGDTTFSGVLEALA 185
N+G Q + EV + + AD + IH+N QE QPEGDT F G++E L
Sbjct: 134 ANIGLVQLNYG----FGPKEVNNLVNSVRADGLCIHLNHTQEVCQPEGDTNFEGLIEKLR 189
Query: 186 EITSTIDYPVIAKETGAGVSKEVAVELEAVGVDAIDISGLGGTSWSAVEYYRTK-DGEKR 244
++ I PV+ K G G+ E V ++A GV +D+SG GGTSW+ +E R E+
Sbjct: 190 QLLPHIKVPVLVKGVGHGIDYESMVAIKASGVKYVDVSGCGGTSWAWIEGRRQPYKAEEE 249
Query: 245 NLALKFWDWGIKTAISLAEVRWAT---NLPIIASGGMRDGITMAKALAMGASMVGIALPV 301
N+ D G+ T + L E T +L +IA GG+R+G+ +AKAL MGA A+P
Sbjct: 250 NIGYLLRDIGVPTDVCLRESAPLTVNGDLHLIAGGGIRNGMDVAKALMMGAEYATAAMPF 309
Query: 302 LRPAAKGDVEGVIRIIKGYAEEIRNVMFLVGARNIKELRKVPLVITG 348
L A + E V +I+ +E+R MF GARNI+ELR++ ++ G
Sbjct: 310 LAAALESS-EAVRAVIQRMRQELRVSMFTCGARNIEELRRMKVIELG 355
>pir||G75437 conserved hypothetical protein - Deinococcus radiodurans (strain
R1) >gi|6458821|gb|AAF10661.1|AE001959_1 (AE001959)
conserved hypothetical protein [Deinococcus radiodurans]
Length = 286
Score = 206 bits (520), Expect = 2e-52
Identities = 118/295 (40%), Positives = 177/295 (60%), Gaps = 16/295 (5%)
Query: 49 LSVKFLGRKFDYPIMITGMTGGTRKGEIAWRINRTLAQAAQELNIPLGLGSQRAMIEKPE 108
L FLGR+ P++I MTGG K + INR LA AA+ L + + LGSQR M+E P+
Sbjct: 3 LDTVFLGRRLKAPVLIGAMTGGAEKAGV---INRNLATAARNLGLGMMLGSQRVMLEHPD 59
Query: 109 TWESYYVRDVAPDVFLVGNLGAPQFGRNAKKRYSVDEVLYAIEKIEADAIAIHMNPLQES 168
WES+ VR+VAP++ L+GNLGA QF Y ++ A++++ ADA+AIH+NPLQE+
Sbjct: 60 AWESFNVREVAPEILLIGNLGAAQFMLG----YGAEQARRAVDEVMADALAIHLNPLQEA 115
Query: 169 IQPEGDTTFSGVLEALAEITSTIDYPVIAKETGAGVSKEVAVELEAVGVDAIDISGLGGT 228
+Q GDT + GV L ++ +D+PVI KE G G+ L A D++G GGT
Sbjct: 116 LQRGGDTRWQGVTYRLKQVARELDFPVIIKEVGHGLDAATLRALADGPFAAYDVAGAGGT 175
Query: 229 SWSAVEYYRTKDGEKRNLALKFWDWGIKTAISLAEVRWATNLP---IIASGGMRDGITMA 285
SW+ VE G+ + L + G+ TA +L + R LP +IASGG+R G+ A
Sbjct: 176 SWARVEQL-VAHGQVHSPDL--CELGVPTAQALRQAR--KTLPGAQLIASGGIRSGLDAA 230
Query: 286 KALAMGASMVGIALPVLRPAAKGDVEGVIRIIKGYAEEIRNVMFLVGARNIKELR 340
+AL++GA +V +A P+L PA E ++ + +E+R +F+ G R+++E+R
Sbjct: 231 RALSLGAEVVAVARPLLEPALDSS-EAAEAWLRNFIQELRVALFVGGYRDVREVR 284
>pir||C70185 carotenoid biosynthesis protein homolog - Lyme disease spirochete
>gi|2688617|gb|AAC67033.1| (AE001169) carotenoid
biosynthesis protein, putative [Borrelia burgdorferi]
Length = 360
Score = 194 bits (488), Expect = 1e-48
Identities = 107/354 (30%), Positives = 192/354 (54%), Gaps = 11/354 (3%)
Query: 1 MEEQTILRKFEHIKHCLTKNVEAHVTNGFEDVHLIHKSLPEIDKDEIDLSVKFLGRKFDY 60
+E + K HI+ CL KN N + + L H +L + + EI++ + G
Sbjct: 9 IEPNILENKKRHIEICLNKNDVKGGCNFLKFIKLKHNALSDFNFSEINIKEEIFGYNISM 68
Query: 61 PIMITGMTGGTRKGEIAWRINRTLAQAAQELNIPLGLGSQRAMIEKPETWESYYVRDVAP 120
P+ I+ MTGG+++G N++L + A L IP+GLGS + + + PE + ++ A
Sbjct: 69 PVFISSMTGGSKEGN---DFNKSLVRIANYLKIPIGLGSFKLLFKYPEYIRDFTLKRYAH 125
Query: 121 DVFLVGNLGAPQFGRNAKKRYSVDEVLYAIEKIEADAIAIHMNPLQESIQPEGDTTFSGV 180
++ L N+GA Q + + ++ I+++E DAI +H+N QE ++ +GD F G+
Sbjct: 126 NIPLFANVGAVQI-----VEFGISKIAEMIKRLEVDAIIVHLNAGQELMKVDGDRNFKGI 180
Query: 181 LEALAEITSTIDYPVIAKETGAGVSKEVAVELEAVGVDAIDISGLGGTSWSAVEYYRTKD 240
E++A+++ + P+I KETG G+S + EL ++G +D++G GGT+W VE ++ +
Sbjct: 181 RESIAKLSDFLSVPLIVKETGFGISPKDVKELFSLGASYVDLAGSGGTNWILVEGMKSNN 240
Query: 241 GEKRNLALKFWDWGIKTAISLAEVRWATNLPIIASGGMRDGITMAKALAMGASMVGIALP 300
N+A F DWGI + +L + + I ASGG G+ +AK +A+GA ++G+A
Sbjct: 241 ---LNIASCFSDWGIPSVFTLLSIDDSLKANIFASGGYETGMDIAKGIALGARLIGVAAV 297
Query: 301 VLRPAAKGDVEGVIRIIKGYAEEIRNVMFLVGARNIKELRKVPLVITGFVREWL 354
VLR + V + Y ++ MFL G++++ E R ++ ++ + L
Sbjct: 298 VLRAFYDSGEDAVFGLFSDYEHILKMSMFLSGSKSLLEFRNNKYFLSSYLLDEL 351
>dbj|BAB07793.1| (AB037666) hypothetical protein [Streptomyces sp. CL190]
Length = 363
Score = 193 bits (486), Expect = 2e-48
Identities = 115/351 (32%), Positives = 195/351 (54%), Gaps = 18/351 (5%)
Query: 8 RKFEHIKHCLTKNVEAHVTNGFEDVHLIHKSLPEIDKDEIDLSVKFLGRKFDYPIMITGM 67
RK +H++ + ++ N F+DV +H +L ID+ ++ L+ F G + PI I M
Sbjct: 6 RKDDHVRLAIEQHNAHSGRNQFDDVSFVHHALAGIDRPDVSLATSFAGISWQVPIYINAM 65
Query: 68 TGGTRKGEIAWRINRTLAQAAQELNIPLGLGSQRAMIEKPETWESYYV-RDVAPDVFLVG 126
TGG+ K + INR LA AA+E +P+ GS A I+ P +++ V RD P+ F++
Sbjct: 66 TGGSEKTGL---INRDLATAARETGVPIASGSMNAYIKDPSCADTFRVLRDENPNGFVIA 122
Query: 127 NLGAPQFGRNAKKRYSVDEVLYAIEKIEADAIAIHMNPLQESIQPEGDTTFSGVLEALAE 186
N+ A +VD AI+ IEA+A+ IH+N QE+ PEGD +F+ + + +
Sbjct: 123 NINATT---------TVDNAQRAIDLIEANALQIHINTAQETPMPEGDRSFASWVPQIEK 173
Query: 187 ITSTIDYPVIAKETGAGVSKEVAVELEAVGVDAIDISGLGGTSWSAVEYYRTKDGEKRNL 246
I + +D PVI KE G G+S++ + L +GV A D+SG GGT ++ +E R + G+ L
Sbjct: 174 IAAAVDIPVIVKEVGNGLSRQTILLLADLGVQAADVSGRGGTDFARIENGRRELGDYAFL 233
Query: 247 ALKFWDWGIKTAISLAEVRWATNLPIIASGGMRDGITMAKALAMGASMVGIALPVLRPAA 306
WG TA L + + +LP++ASGG+R + + +ALA+GA VG + LR
Sbjct: 234 ----HGWGQSTAACLLDAQ-DISLPVLASGGVRHPLDVVRALALGARAVGSSAGFLRTLM 288
Query: 307 KGDVEGVIRIIKGYAEEIRNVMFLVGARNIKELRKVPLVITGFVREWLLQR 357
V+ +I + + +++ + ++GAR +L + +++ G +R++ R
Sbjct: 289 DDGVDALITKLTTWLDQLAALQTMLGARTPADLTRCDVLLHGELRDFCADR 339
>dbj|BAB07820.1| (AB037907) hypothetical protein [Streptomyces griseolosporeus]
Length = 364
Score = 183 bits (461), Expect = 2e-45
Identities = 120/361 (33%), Positives = 191/361 (52%), Gaps = 21/361 (5%)
Query: 8 RKFEHIKHCLTKNVEAHV-TNGFEDVHLIHKSLPEIDKDEIDLSVKFLGRKFDYPIMITG 66
RK +H++ T+ AH N F+DV +H +L ID+ ++ L+ F G + P+ I
Sbjct: 6 RKDDHVR-LATEQQRAHSGRNQFDDVSFVHHALAGIDRPDVRLATTFAGITWRLPLYINA 64
Query: 67 MTGGTRKGEIAWRINRTLAQAAQELNIPLGLGSQRAMIEKPETWESYYV-RDVAPDVFLV 125
MTGG+ K INR LA AA+E + GS A P +++ V R PD F++
Sbjct: 65 MTGGSAK---TGAINRDLAVAARETGAAIASGSMHAFFRDPSCADTFRVLRTENPDGFVM 121
Query: 126 GNLGAPQFGRNAKKRYSVDEVLYAIEKIEADAIAIHMNPLQESIQPEGDTTFSGVLEALA 185
N+ A SVD A++ IEA+A+ IH+N QE+ PEGD +F +A
Sbjct: 122 ANVNATA---------SVDNARRAVDLIEANALQIHLNTAQETPMPEGDRSFGSWPAQIA 172
Query: 186 EITSTIDYPVIAKETGAGVSKEVAVELEAVGVDAIDISGLGGTSWSAVEYYRTKDGEKRN 245
+IT+ +D PVI KE G G+S++ + L +GV D+SG GGT ++ +E R G+
Sbjct: 173 KITAAVDVPVIVKEVGNGLSRQTLLALPDLGVRVADVSGRGGTDFARIENSRRPLGDYAF 232
Query: 246 LALKFWDWGIKTAISLAEVRWATNLPIIASGGMRDGITMAKALAMGASMVGIALPVLRPA 305
L WG T L + + P++ASGG+R+ + +A+ALA+GA VG + LR
Sbjct: 233 L----HGWGQSTPACLLDAQ-DVGFPLLASGGIRNPLDVARALALGAGAVGSSGVFLRTL 287
Query: 306 AKGDVEGVIRIIKGYAEEIRNVMFLVGARNIKELRKVPLVITGFVREWLLQR-IDLNSYL 364
G V ++ I + +++ + ++GAR +L + ++I G +R + R ID+ +
Sbjct: 288 IDGGVSALVAQISTWLDQLAALQTMLGARTPADLTRCDVLIHGPLRSFCTDRGIDIGRFA 347
Query: 365 R 365
R
Sbjct: 348 R 348
>sp|P50740|YPGA_BACSU HYPOTHETICAL 22.6 KD PROTEIN IN CMK-GPSA INTERGENIC REGION
>gi|7474674|pir||D69935 conserved hypothetical protein
ypgA - Bacillus subtilis >gi|1146216|gb|AAC83963.1|
(L47648) similar to Erwinia herbicola carotenoid
biosynthesis cluster; putative [Bacillus subtilis]
>gi|2634705|emb|CAB14203.1| (Z99115) similar to
hypothetical proteins [Bacillus subtilis]
Length = 212
Score = 159 bits (398), Expect = 5e-38
Identities = 91/215 (42%), Positives = 135/215 (62%), Gaps = 11/215 (5%)
Query: 153 IEADAIAIHMNPLQESIQPEGDTTFSGVLEALAEITSTIDYPVIAKETGAGVSKEVAVEL 212
I A+A+ IH+N +QE + PEGD +FSG L+ + +I S + PVI KE G G+SK A +L
Sbjct: 2 IGANALQIHLNVIQEIVMPEGDRSFSGALKRIEQICSRVSVPVIVKEVGFGMSKASAGKL 61
Query: 213 EAVGVDAIDISGLGGTSWSAVEYYRTKDGEKRNLALKFWDWGIKTAISLAEVRWATNLP- 271
G A+DI G GGT++S +E R +R ++ F WGI TA SLAE+R + P
Sbjct: 62 YEAGAAAVDIGGYGGTNFSKIENLR----RQRQISF-FNSWGISTAASLAEIR--SEFPA 114
Query: 272 --IIASGGMRDGITMAKALAMGASMVGIALPVLRPAAKGDVEGVIRIIKGYAEEIRNVMF 329
+IASGG++D + +AKA+A+GAS G+A L+ EG++ I+ EE++ +M
Sbjct: 115 STMIASGGLQDALDVAKAIALGASCTGMAGHFLKALTDSGEEGLLEEIQLILEELKLIMT 174
Query: 330 LVGARNIKELRKVPLVITGFVREWLLQR-IDLNSY 363
++GAR I +L+K PLVI G WL +R ++ +SY
Sbjct: 175 VLGARTIADLQKAPLVIKGETHHWLTERGVNTSSY 209
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.319 0.137 0.397
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 136273883
Number of Sequences: 2977
Number of extensions: 5649939
Number of successful extensions: 14129
Number of sequences better than 1.0e-10: 20
Number of HSP's better than 0.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 14032
Number of HSP's gapped (non-prelim): 20
length of query: 370
length of database: 189,106,746
effective HSP length: 56
effective length of query: 314
effective length of database: 155,591,474
effective search space: 48855722836
effective search space used: 48855722836
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 166 (69.1 bits)