BLASTP 2.0.10 [Aug-26-1999]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= PAB1665 (PAB1665) DE:Hypothetical protein
         (259 letters)

Database: ./suso.pep; /banques/blast2/nr.pep
           598,487 sequences; 189,106,746 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

pir||G75083 hypothetical protein PAB1665 - Pyrococcus abyssi (st...   509  e-143
sp|O58974|YC09_PYRHO HYPOTHETICAL PROTEIN PH1209 >gi|7448668|pir...   447  e-125
sp|Q58515|YB15_METJA HYPOTHETICAL PROTEIN MJ1115 >gi|2128044|pir...   326  2e-88
gi|11498031 conserved hypothetical protein [Archaeoglobus fulgid...   225  4e-58
pir||G72475 hypothetical protein APE2448 - Aeropyrum pernix (str...   194  7e-49
gb|AAG20579.1| (AE005129) Vng2518c [Halobacterium sp. NRC-1]          181  7e-45
sp|P72966|BTPA_SYNY3 PHOTOSYSTEM I BIOGENESIS PROTEIN BTPA >gi|7...   171  6e-42
sp|Q19408|YSMK_CAEEL HYPOTHETICAL 32.1 KD PROTEIN F13E9.3 IN CHR...   118  7e-26
gb|AAF50585.1| (AE003559) CG8607 gene product [Drosophila melano...   109  2e-23
sp|P39364|SGCQ_ECOLI PUTATIVE SGC REGION PROTEIN SGCQ >gi|136107...    96  5e-19

>pir||G75083 hypothetical protein PAB1665 - Pyrococcus abyssi (strain Orsay)
           >gi|5458484|emb|CAB49972.1| (AJ248286) hypothetical
           protein [Pyrococcus abyssi]
           Length = 259
           
 Score =  509 bits (1296), Expect = e-143
 Identities = 259/259 (100%), Positives = 259/259 (100%)

Query: 1   MDLGSKPLIGVVHLLPLPGSPGYRGSIEEILDRAISDAAKYQEAGFDAIILENYGDFPYS 60
           MDLGSKPLIGVVHLLPLPGSPGYRGSIEEILDRAISDAAKYQEAGFDAIILENYGDFPYS
Sbjct: 1   MDLGSKPLIGVVHLLPLPGSPGYRGSIEEILDRAISDAAKYQEAGFDAIILENYGDFPYS 60

Query: 61  KTISKETLASFAVIAKEVGREISIPIGINVLRNDCVASYSIAYSVRADFIRVNVLTGVAF 120
           KTISKETLASFAVIAKEVGREISIPIGINVLRNDCVASYSIAYSVRADFIRVNVLTGVAF
Sbjct: 61  KTISKETLASFAVIAKEVGREISIPIGINVLRNDCVASYSIAYSVRADFIRVNVLTGVAF 120

Query: 121 TDQGIIEGCARELAELRARLPSRIKVLADVHVKHATHFSSFEVALLDTVERGGADAVIIT 180
           TDQGIIEGCARELAELRARLPSRIKVLADVHVKHATHFSSFEVALLDTVERGGADAVIIT
Sbjct: 121 TDQGIIEGCARELAELRARLPSRIKVLADVHVKHATHFSSFEVALLDTVERGGADAVIIT 180

Query: 181 GSRTGSEVDIQELMLAKKISPVPVIVGSGLNPRNIRLFWRYADGFIVGTWVKEGGKTLNE 240
           GSRTGSEVDIQELMLAKKISPVPVIVGSGLNPRNIRLFWRYADGFIVGTWVKEGGKTLNE
Sbjct: 181 GSRTGSEVDIQELMLAKKISPVPVIVGSGLNPRNIRLFWRYADGFIVGTWVKEGGKTLNE 240

Query: 241 VSLERATRIAKVVKSLRGE 259
           VSLERATRIAKVVKSLRGE
Sbjct: 241 VSLERATRIAKVVKSLRGE 259


>sp|O58974|YC09_PYRHO HYPOTHETICAL PROTEIN PH1209 >gi|7448668|pir||C71064 hypothetical
           protein PH1209 - Pyrococcus horikoshii
           >gi|3257626|dbj|BAA30309.1| (AP000005) 259aa long
           hypothetical protein [Pyrococcus horikoshii]
           Length = 259
           
 Score =  447 bits (1137), Expect = e-125
 Identities = 210/257 (81%), Positives = 245/257 (94%)

Query: 1   MDLGSKPLIGVVHLLPLPGSPGYRGSIEEILDRAISDAAKYQEAGFDAIILENYGDFPYS 60
           M   +KPLIGVVHL PLPGSPGY+G ++E++DRAISDAAKYQEAGFDAIILENYGDFPYS
Sbjct: 1   MQFNNKPLIGVVHLPPLPGSPGYKGELDEVIDRAISDAAKYQEAGFDAIILENYGDFPYS 60

Query: 61  KTISKETLASFAVIAKEVGREISIPIGINVLRNDCVASYSIAYSVRADFIRVNVLTGVAF 120
           KT+ KET+++F+V+A EV REI++P+GINVLRNDC+A+YSIAYS++ADFIRVNVLTGVAF
Sbjct: 61  KTVGKETVSAFSVVANEVKREIALPLGINVLRNDCIAAYSIAYSIKADFIRVNVLTGVAF 120

Query: 121 TDQGIIEGCARELAELRARLPSRIKVLADVHVKHATHFSSFEVALLDTVERGGADAVIIT 180
           TDQGI+EGCARELAELR RLPSRI VLADVHVKHATHFS+FE ALLDT+ERGGADAVI+T
Sbjct: 121 TDQGIVEGCARELAELRTRLPSRIDVLADVHVKHATHFSNFENALLDTIERGGADAVIVT 180

Query: 181 GSRTGSEVDIQELMLAKKISPVPVIVGSGLNPRNIRLFWRYADGFIVGTWVKEGGKTLNE 240
           GSRTGSEVDIQEL+ AK+ISPVPV+VGSG+NPRNI+LFWRY+DGFIVGTWVKEGG+T+NE
Sbjct: 181 GSRTGSEVDIQELITAKRISPVPVLVGSGVNPRNIKLFWRYSDGFIVGTWVKEGGRTINE 240

Query: 241 VSLERATRIAKVVKSLR 257
           VS+ERAT++AK+VKSLR
Sbjct: 241 VSIERATKLAKLVKSLR 257


>sp|Q58515|YB15_METJA HYPOTHETICAL PROTEIN MJ1115 >gi|2128044|pir||B64439 hypothetical
           protein homolog MJ1115 - Methanococcus jannaschii
           >gi|1591754|gb|AAB99116.1| (U67554) conserved
           hypothetical protein [Methanococcus jannaschii]
           Length = 261
           
 Score =  326 bits (826), Expect = 2e-88
 Identities = 157/252 (62%), Positives = 199/252 (78%)

Query: 6   KPLIGVVHLLPLPGSPGYRGSIEEILDRAISDAAKYQEAGFDAIILENYGDFPYSKTISK 65
           KPLIG+VHL PLPGS  Y  + ++I+D AI +A K +EAGFDA+++EN+GD P+ K   K
Sbjct: 8   KPLIGMVHLKPLPGSYHYNDNFDDIVDFAIKEAKKLEEAGFDAVMIENFGDAPFKKEADK 67

Query: 66  ETLASFAVIAKEVGREISIPIGINVLRNDCVASYSIAYSVRADFIRVNVLTGVAFTDQGI 125
            T+AS AVIAK +  E+S+P+GIN+LRND + +YSIAY V+ADFIRVNVL+GVAFTDQGI
Sbjct: 68  ITIASMAVIAKAIKEEVSLPLGINILRNDAIGAYSIAYVVKADFIRVNVLSGVAFTDQGI 127

Query: 126 IEGCARELAELRARLPSRIKVLADVHVKHATHFSSFEVALLDTVERGGADAVIITGSRTG 185
           IEG A ELA+L+  LPS+IKV ADVHVKHA HF  FE +LLDTVERG ADAVII+G RTG
Sbjct: 128 IEGKAYELAKLKKLLPSKIKVFADVHVKHAYHFIDFESSLLDTVERGLADAVIISGKRTG 187

Query: 186 SEVDIQELMLAKKISPVPVIVGSGLNPRNIRLFWRYADGFIVGTWVKEGGKTLNEVSLER 245
            EVDI++L LAK++  VPVIVGSG N  N+R+ W YADGFI+GTW+K+ GK  NE+ ++R
Sbjct: 188 KEVDIEKLKLAKELVDVPVIVGSGTNYNNLRILWSYADGFIIGTWIKKDGKANNEIDIDR 247

Query: 246 ATRIAKVVKSLR 257
           A +I  +   L+
Sbjct: 248 AKKIVNLANKLK 259


>gi|11498031 conserved hypothetical protein [Archaeoglobus fulgidus]
           >gi|3915360|sp|O29828|Y419_ARCFU HYPOTHETICAL PROTEIN
           AF0419 >gi|7448670|pir||C69302 conserved hypothetical
           protein AF0419 - Archaeoglobus fulgidus
           >gi|2650208|gb|AAB90814.1| (AE001075) conserved
           hypothetical protein [Archaeoglobus fulgidus]
           Length = 246
           
 Score =  225 bits (568), Expect = 4e-58
 Identities = 121/249 (48%), Positives = 163/249 (64%), Gaps = 6/249 (2%)

Query: 6   KPLIGVVHLLPLPGSPGYRGSIEEILDRAISDAAKYQEAGFDAIILENYGDFPYSKTISK 65
           K +IGVVHLLPLPGSP +   +  ++D+A+ DA   +E G DA+ILENYGD P+ K + K
Sbjct: 3   KTVIGVVHLLPLPGSPEHT-DLSAVIDKAVKDARAIEEGGADALILENYGDKPFLKEVGK 61

Query: 66  ETLASFAVIAKEVGREISIPIGINVLRNDCVASYSIAYSVRADFIRVNVLTGVAFTDQGI 125
           ET+A+  VIA EV R++SI +GINVLRND VA+ +IA +V ADF+RVN L   + + +GI
Sbjct: 62  ETVAAMTVIACEVKRDVSIGLGINVLRNDAVAALAIAKAVNADFVRVNQLFFTSVSPEGI 121

Query: 126 IEGCARELAELRARLPSRIKVLADVHVKHATHFSSFEVALLDTVERGGADAVIITGSRTG 185
           +EG A E+   +  +  R  + AD+ VKHA HF+S E   L+  ER  ADAVI+TG  TG
Sbjct: 122 LEGKAGEVMRYKKLVDCRAMIFADIAVKHAVHFASLEDYCLN-AERSLADAVILTGKTTG 180

Query: 186 SEVDIQELMLAKKISPVPVIVGSGLNPRNIRLFWRYADGFIVGTWVKEGGKTLNEVSLER 245
            EV ++EL  AKK   +PV+ GSG+N  N     ++ DG IVGT++K GG     V  ER
Sbjct: 181 GEVSLEELKYAKKTLKMPVLAGSGVNAENAARILKWCDGVIVGTYIKRGGL----VDAER 236

Query: 246 ATRIAKVVK 254
             RI +  K
Sbjct: 237 VRRIVRAAK 245


>pir||G72475 hypothetical protein APE2448 - Aeropyrum pernix (strain K1)
           >gi|5106152|dbj|BAA81463.1| (AP000064) 287aa long
           hypothetical protein [Aeropyrum pernix]
           Length = 287
           
 Score =  194 bits (489), Expect = 7e-49
 Identities = 112/274 (40%), Positives = 161/274 (57%), Gaps = 22/274 (8%)

Query: 6   KPLIGVVHLLPLPGSPGYRG-----------SIEEILDRAISDAAKYQEAGFDAIILENY 54
           KPL+GVVHL PLPGS GY+            S+EEI++ A+S+A+ Y++AGFD +ILENY
Sbjct: 8   KPLLGVVHLPPLPGSTGYKARRYPPRLGKVWSLEEIIEYAVSEASVYEDAGFDGVILENY 67

Query: 55  GDFPYSKTISKETLASFAVIAKEVGREISIPIGINVLRNDCVASYSIAYSVRADFIRVNV 114
           GD PY KT     +++   I +EV   + IP+G+N+LRN  V + + AYS    FIRVN 
Sbjct: 68  GDTPYPKTPGPLQVSAMTRIVREVSSAVGIPVGVNMLRNGSVEALASAYSGGGSFIRVNS 127

Query: 115 LTGVAFTDQGIIEGCARELAELRARL----PSRIKVLADVHVKHATHFSSFEVA--LLDT 168
           L     + +GI+E  A  LA+  A L      RI++LADV VKH+       +A  + D 
Sbjct: 128 LCETRLSPEGILEPDAARLAKSLALLGILEERRIEILADVDVKHSQPLVETSIAQTVRDC 187

Query: 169 VERGGAD--AVIITGSRTGSEVDIQELMLAKKIS---PVPVIVGSGLNPRNIRLFWRYAD 223
           +ER G     V++TG  TG   D  E++ A + +    V  +VGSG++  N+  +W  AD
Sbjct: 188 IERSGVPIAGVVLTGHATGGAPDADEVVAAARTASEYEVKTVVGSGVSQLNLSKYWHIAD 247

Query: 224 GFIVGTWVKEGGKTLNEVSLERATRIAKVVKSLR 257
           GFI+G+ +K GGK  N +  E+A  IA + + LR
Sbjct: 248 GFIIGSSIKLGGKPWNPIDKEKARLIASLAERLR 281


>gb|AAG20579.1| (AE005129) Vng2518c [Halobacterium sp. NRC-1]
           Length = 267
           
 Score =  181 bits (455), Expect = 7e-45
 Identities = 101/258 (39%), Positives = 150/258 (57%), Gaps = 10/258 (3%)

Query: 7   PLIGVVHLLPLPGSPGYR-GSIEEILDRAISDAAKYQEAGFDAIILENYGDFP-YSKTIS 64
           P++G+VHL PLPG+PGY  G+   I D A+ DA++ +  G DA+++EN+GD P Y+  + 
Sbjct: 10  PVVGMVHLSPLPGAPGYDDGNRPAIRDAALRDASRLEAGGVDALLVENFGDAPFYADDVP 69

Query: 65  KETLASFAVIAKEVGREISIPIGINVLRNDCVASYSIAYSVRADFIRVNVLTGVAFTDQG 124
           K  +AS A + +++ RE  +P+G+NVLRND  A+ SIA +  ADF+RVNV TG   TDQG
Sbjct: 70  KHVVASMAALVRDITREAEVPVGVNVLRNDAEAAVSIAAAADADFVRVNVHTGARLTDQG 129

Query: 125 IIEGCARELAELRARL-PSRIKVLADVHVKHATHFSS--FEVALLDTVERGGADAVIITG 181
           ++ G A E   LR RL  + + +LAD+ VKH+   +       + + +ERG AD VI +G
Sbjct: 130 VVGGQAAETVRLRDRLDAAEVSMLADIDVKHSAALAERPLSEGVAELLERGHADGVIASG 189

Query: 182 SRTGSEVDIQELMLA-----KKISPVPVIVGSGLNPRNIRLFWRYADGFIVGTWVKEGGK 236
           + TG   D   L        +  +  PV VGSG+    +      ADG IVGT +K+ G+
Sbjct: 190 AGTGHATDHDHLQAVVDARDRLDADAPVFVGSGVTQETVGATLDLADGAIVGTALKQNGE 249

Query: 237 TLNEVSLERATRIAKVVK 254
           T   V  +R   +    +
Sbjct: 250 TTAPVDGDRVRALVDAAR 267


>sp|P72966|BTPA_SYNY3 PHOTOSYSTEM I BIOGENESIS PROTEIN BTPA >gi|7448669|pir||S74944
           hypothetical protein sll0634 - Synechocystis sp. (strain
           PCC 6803) >gi|1652059|dbj|BAA16984.1| (D90902)
           hypothetical protein [Synechocystis sp.]
           >gi|1923214|gb|AAC45087.1| (U37695) biogenesis of
           thylakoid protein A [Synechocystis PCC6803]
           Length = 287
           
 Score =  171 bits (430), Expect = 6e-42
 Identities = 101/238 (42%), Positives = 144/238 (60%), Gaps = 5/238 (2%)

Query: 7   PLIGVVHLLPLPGSPGYRGSIEEILDRAISDAAKYQEAGFDAIILENYGDFPYSKT-ISK 65
           P+IGVVHLLPLP S  + G++  +++RA  +A      G D II+EN+ D P+ K  +  
Sbjct: 12  PVIGVVHLLPLPTSARWGGNLTAVIERAEQEATALAAGGVDGIIVENFFDAPFPKQRVDP 71

Query: 66  ETLASFAVIAKEVGREISIPIGINVLRNDCVASYSIAYSVRADFIRVNVLTGVAFTDQGI 125
             +++  +I   +   +  P+GINVLRND  ++ +IA  V A FIRVNVLTGV  TDQG+
Sbjct: 72  AVVSAMTLIVDRLQNLVVAPVGINVLRNDAHSALAIASCVGAKFIRVNVLTGVMATDQGL 131

Query: 126 IEGCARELAELRARLPSRIKVLADVHVKHATHFS--SFEVALLDTVERGGADAVIITGSR 183
           IEG A EL   R  L S + +LADV VKHA      +   A+ DT+ERG AD +I++G  
Sbjct: 132 IEGNAHELLRYRRELSSDVAILADVLVKHARPLGTPNLTTAVTDTIERGLADGIILSGWA 191

Query: 184 TGSEVDIQELMLAKKISP-VPVIVGSGLNPRNIRLFWRYADGFIVGTWVKEGGKTLNE 240
           TGS  ++++L LA   +   PV +GSG +  NI    + A+G IV + +K  G  +NE
Sbjct: 192 TGSPPNLEDLELATNAAKGTPVFIGSGADEDNIGQLIQAANGVIVASSLKRHG-NINE 248


>sp|Q19408|YSMK_CAEEL HYPOTHETICAL 32.1 KD PROTEIN F13E9.3 IN CHROMOSOME IV PRECURSOR
           >gi|7499015|pir||T20841 hypothetical protein F13E9.3 -
           Caenorhabditis elegans >gi|3875846|emb|CAA93406.1|
           (Z69383) predicted using Genefinder [Caenorhabditis
           elegans]
           Length = 298
           
 Score =  118 bits (293), Expect = 7e-26
 Identities = 80/264 (30%), Positives = 131/264 (49%), Gaps = 11/264 (4%)

Query: 4   GSKPLIGVVHLLPLPGSPGYRGSIEEILDRAISDAAKYQEAGFDAIILENYGDFPYSKT- 62
           GS  ++ +    P   +P     +  IL +   +A  Y + G D +I+EN  D PY K  
Sbjct: 35  GSGEVVVIGAEKPKDKTPSNTLPMSAILKKVRKEADVYFKNGVDGVIVENMHDVPYVKPP 94

Query: 63  -----ISKETLASFAVIAKEVGREISIPIGINVLRNDCVASYSIAYSVRADFIRVNVLTG 117
                +S   LAS  ++        +   GI +L      + ++AY+   DFIR      
Sbjct: 95  ASPEIVSSMALASDQLVKSRDAHHPAALTGIQILAAANREALAVAYTTGMDFIRAEGFVY 154

Query: 118 VAFTDQGIIEGCARELAELRARLPSR-IKVLADVHVKHATHFSSFEVALLDTVERGG--- 173
               D+G I+GCA  L   R+ L +  I +  D+  KH+ H  + +V++ +  +      
Sbjct: 155 SHVADEGWIDGCAGGLLRYRSSLKAENIAIFTDIKKKHSAHSVTSDVSIHEMAKDAKFNC 214

Query: 174 ADAVIITGSRTGSEVDIQELMLAKKISPVPVIVGSGLNPRNIRLFWRYADGFIVGTWVKE 233
           AD VI+TGS TGS   ++E++   K+   PV++GSG+N +N R F + A GFIVG+  K 
Sbjct: 215 ADGVIVTGSATGSAASLEEMIQVMKVQEFPVLIGSGINGKNAREFVK-AHGFIVGSDFKI 273

Query: 234 GGKTLNEVSLERATRIAKVVKSLR 257
           GG+  N++   R ++  K V +L+
Sbjct: 274 GGEWKNDLDSGRISKFMKHVNTLK 297


>gb|AAF50585.1| (AE003559) CG8607 gene product [Drosophila melanogaster]
           Length = 278
           
 Score =  109 bits (271), Expect = 2e-23
 Identities = 70/248 (28%), Positives = 121/248 (48%), Gaps = 8/248 (3%)

Query: 18  PGSPGYRGSIEEILDRAISDAAKYQEAGFDAIILENYGDFPY--SKTISKETLASFAVIA 75
           PG+P Y G+ ++ ++ AI +A  Y++   DA+++EN  D PY   + +  E +A    + 
Sbjct: 28  PGTPRYAGNWKQTIENAIYEANLYKKHQLDAVLIENMHDIPYVPERLLGAEIVACMTRLG 87

Query: 76  KEVGREI--SIPIGINVLRNDCVASYSIAYSVRADFIRVNVLTGVAFTDQGIIEGCAREL 133
           + V   I   IP G+ VL      + +IA + +  FIR          D+G  + CA +L
Sbjct: 88  RAVREVIPQEIPCGVQVLACGNKQALAIAKASQLQFIRAEGFVFGHVADEGFTDACAGDL 147

Query: 134 AELRARLPSR-IKVLADVHVKHATHFSSFEVALLDTVERGG---ADAVIITGSRTGSEVD 189
              R  + +  + +  D+  KH++H  + +V+LL+T         D +IITG+ TG    
Sbjct: 148 LRYRKLIDAEDVLIFTDLKKKHSSHAITADVSLLETAHAAEFFMTDGIIITGTATGHAAS 207

Query: 190 IQELMLAKKISPVPVIVGSGLNPRNIRLFWRYADGFIVGTWVKEGGKTLNEVSLERATRI 249
            ++L        VP+I+GSG+   NI  +++ A   I+G+  K  G  L E+S       
Sbjct: 208 PEDLQQLSGRVKVPLIIGSGVTRDNIDSYYKDAHAVIIGSHFKRNGNWLEEISEPAVDEF 267

Query: 250 AKVVKSLR 257
            + +  LR
Sbjct: 268 MQKICQLR 275


>sp|P39364|SGCQ_ECOLI PUTATIVE SGC REGION PROTEIN SGCQ >gi|1361076|pir||S56528
           hypothetical 29.4K protein (fecI-fimB intergenic region)
           - Escherichia coli >gi|537144|gb|AAA97199.1| (U14003)
           ORF_f268a [Escherichia coli] >gi|1790757|gb|AAC77259.1|
           (AE000501) putative nucleoside triphosphatase
           [Escherichia coli K12]
           Length = 268
           
 Score = 95.6 bits (234), Expect = 5e-19
 Identities = 72/258 (27%), Positives = 120/258 (45%), Gaps = 8/258 (3%)

Query: 6   KPLIGVVHLLPLPGSPGYRGSI--EEILDRAISDAAKYQEAGFDAIILENYGDFPYSKTI 63
           K +I + HL  LPG P +   +    ++D+A  D    Q  G DA++  N    PY   +
Sbjct: 12  KAVIAMCHLRALPGDPSFDAQLGMNWVIDKAWDDLMALQNGGVDAVMFSNEFSLPYLTKV 71

Query: 64  SKETLASFAVIAKEVGREISIPIGINVLRNDCVASYSIAYSVRADFIRVNVLTGVAFTDQ 123
             ET A+ A I  ++  +I IP G+NVL  D VAS+ +A +  A FIR  + TG   +D 
Sbjct: 72  RPETTAAMARIIGQLMSDIRIPFGVNVLW-DPVASFDLAMATGAKFIR-EIFTGAYASDF 129

Query: 124 GIIEGCARELAELRARL-PSRIKVLADVHVKHATHFSSFEVALL--DTVERGGADAVIIT 180
           G+ +    E    + R+    +K L ++  + A +  + ++  +   TV     DA+ ++
Sbjct: 130 GVWDTNVGETIRHQHRIGAGEVKTLFNIVPEAAVYLGNRDICSIAKSTVFNNHPDALCVS 189

Query: 181 GSRTGSEVDIQELMLAKKISP-VPVIVGSGLNPRNIRLFWRYADGFIVGTWVKEGGKTLN 239
           G   G+  D   L   K+  P   V+  +G+   N+      ADG +  T  K+ G   N
Sbjct: 190 GLTAGTRTDSALLKRVKETVPDTVVLANTGVCLENVEEQLSIADGCVTATTFKKDGVFAN 249

Query: 240 EVSLERATRIAKVVKSLR 257
            V   R ++  + V  +R
Sbjct: 250 FVDQARVSQFMEKVHHIR 267


  Database: ./suso.pep
    Posted date:  Jul 6, 2001  5:57 PM
  Number of letters in database: 840,471
  Number of sequences in database:  2977
  
  Database: /banques/blast2/nr.pep
    Posted date:  Dec 14, 2000 12:46 PM
  Number of letters in database: 188,266,275
  Number of sequences in database:  595,510
  
Lambda     K      H
   0.320    0.139    0.392 

Gapped
Lambda     K      H
   0.270   0.0470    0.230 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 91084978
Number of Sequences: 2977
Number of extensions: 3720559
Number of successful extensions: 9097
Number of sequences better than 1.0e-10: 10
Number of HSP's better than  0.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 9070
Number of HSP's gapped (non-prelim): 10
length of query: 259
length of database: 189,106,746
effective HSP length: 56
effective length of query: 203
effective length of database: 155,591,474
effective search space: 31585069222
effective search space used: 31585069222
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.8 bits)
S2: 164 (68.3 bits)