BLASTP 2.0.10 [Aug-26-1999] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= PAB1665 (PAB1665) DE:Hypothetical protein (259 letters) Database: ./suso.pep; /banques/blast2/nr.pep 598,487 sequences; 189,106,746 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value pir||G75083 hypothetical protein PAB1665 - Pyrococcus abyssi (st... 509 e-143 sp|O58974|YC09_PYRHO HYPOTHETICAL PROTEIN PH1209 >gi|7448668|pir... 447 e-125 sp|Q58515|YB15_METJA HYPOTHETICAL PROTEIN MJ1115 >gi|2128044|pir... 326 2e-88 gi|11498031 conserved hypothetical protein [Archaeoglobus fulgid... 225 4e-58 pir||G72475 hypothetical protein APE2448 - Aeropyrum pernix (str... 194 7e-49 gb|AAG20579.1| (AE005129) Vng2518c [Halobacterium sp. NRC-1] 181 7e-45 sp|P72966|BTPA_SYNY3 PHOTOSYSTEM I BIOGENESIS PROTEIN BTPA >gi|7... 171 6e-42 sp|Q19408|YSMK_CAEEL HYPOTHETICAL 32.1 KD PROTEIN F13E9.3 IN CHR... 118 7e-26 gb|AAF50585.1| (AE003559) CG8607 gene product [Drosophila melano... 109 2e-23 sp|P39364|SGCQ_ECOLI PUTATIVE SGC REGION PROTEIN SGCQ >gi|136107... 96 5e-19 >pir||G75083 hypothetical protein PAB1665 - Pyrococcus abyssi (strain Orsay) >gi|5458484|emb|CAB49972.1| (AJ248286) hypothetical protein [Pyrococcus abyssi] Length = 259 Score = 509 bits (1296), Expect = e-143 Identities = 259/259 (100%), Positives = 259/259 (100%) Query: 1 MDLGSKPLIGVVHLLPLPGSPGYRGSIEEILDRAISDAAKYQEAGFDAIILENYGDFPYS 60 MDLGSKPLIGVVHLLPLPGSPGYRGSIEEILDRAISDAAKYQEAGFDAIILENYGDFPYS Sbjct: 1 MDLGSKPLIGVVHLLPLPGSPGYRGSIEEILDRAISDAAKYQEAGFDAIILENYGDFPYS 60 Query: 61 KTISKETLASFAVIAKEVGREISIPIGINVLRNDCVASYSIAYSVRADFIRVNVLTGVAF 120 KTISKETLASFAVIAKEVGREISIPIGINVLRNDCVASYSIAYSVRADFIRVNVLTGVAF Sbjct: 61 KTISKETLASFAVIAKEVGREISIPIGINVLRNDCVASYSIAYSVRADFIRVNVLTGVAF 120 Query: 121 TDQGIIEGCARELAELRARLPSRIKVLADVHVKHATHFSSFEVALLDTVERGGADAVIIT 180 TDQGIIEGCARELAELRARLPSRIKVLADVHVKHATHFSSFEVALLDTVERGGADAVIIT Sbjct: 121 TDQGIIEGCARELAELRARLPSRIKVLADVHVKHATHFSSFEVALLDTVERGGADAVIIT 180 Query: 181 GSRTGSEVDIQELMLAKKISPVPVIVGSGLNPRNIRLFWRYADGFIVGTWVKEGGKTLNE 240 GSRTGSEVDIQELMLAKKISPVPVIVGSGLNPRNIRLFWRYADGFIVGTWVKEGGKTLNE Sbjct: 181 GSRTGSEVDIQELMLAKKISPVPVIVGSGLNPRNIRLFWRYADGFIVGTWVKEGGKTLNE 240 Query: 241 VSLERATRIAKVVKSLRGE 259 VSLERATRIAKVVKSLRGE Sbjct: 241 VSLERATRIAKVVKSLRGE 259 >sp|O58974|YC09_PYRHO HYPOTHETICAL PROTEIN PH1209 >gi|7448668|pir||C71064 hypothetical protein PH1209 - Pyrococcus horikoshii >gi|3257626|dbj|BAA30309.1| (AP000005) 259aa long hypothetical protein [Pyrococcus horikoshii] Length = 259 Score = 447 bits (1137), Expect = e-125 Identities = 210/257 (81%), Positives = 245/257 (94%) Query: 1 MDLGSKPLIGVVHLLPLPGSPGYRGSIEEILDRAISDAAKYQEAGFDAIILENYGDFPYS 60 M +KPLIGVVHL PLPGSPGY+G ++E++DRAISDAAKYQEAGFDAIILENYGDFPYS Sbjct: 1 MQFNNKPLIGVVHLPPLPGSPGYKGELDEVIDRAISDAAKYQEAGFDAIILENYGDFPYS 60 Query: 61 KTISKETLASFAVIAKEVGREISIPIGINVLRNDCVASYSIAYSVRADFIRVNVLTGVAF 120 KT+ KET+++F+V+A EV REI++P+GINVLRNDC+A+YSIAYS++ADFIRVNVLTGVAF Sbjct: 61 KTVGKETVSAFSVVANEVKREIALPLGINVLRNDCIAAYSIAYSIKADFIRVNVLTGVAF 120 Query: 121 TDQGIIEGCARELAELRARLPSRIKVLADVHVKHATHFSSFEVALLDTVERGGADAVIIT 180 TDQGI+EGCARELAELR RLPSRI VLADVHVKHATHFS+FE ALLDT+ERGGADAVI+T Sbjct: 121 TDQGIVEGCARELAELRTRLPSRIDVLADVHVKHATHFSNFENALLDTIERGGADAVIVT 180 Query: 181 GSRTGSEVDIQELMLAKKISPVPVIVGSGLNPRNIRLFWRYADGFIVGTWVKEGGKTLNE 240 GSRTGSEVDIQEL+ AK+ISPVPV+VGSG+NPRNI+LFWRY+DGFIVGTWVKEGG+T+NE Sbjct: 181 GSRTGSEVDIQELITAKRISPVPVLVGSGVNPRNIKLFWRYSDGFIVGTWVKEGGRTINE 240 Query: 241 VSLERATRIAKVVKSLR 257 VS+ERAT++AK+VKSLR Sbjct: 241 VSIERATKLAKLVKSLR 257 >sp|Q58515|YB15_METJA HYPOTHETICAL PROTEIN MJ1115 >gi|2128044|pir||B64439 hypothetical protein homolog MJ1115 - Methanococcus jannaschii >gi|1591754|gb|AAB99116.1| (U67554) conserved hypothetical protein [Methanococcus jannaschii] Length = 261 Score = 326 bits (826), Expect = 2e-88 Identities = 157/252 (62%), Positives = 199/252 (78%) Query: 6 KPLIGVVHLLPLPGSPGYRGSIEEILDRAISDAAKYQEAGFDAIILENYGDFPYSKTISK 65 KPLIG+VHL PLPGS Y + ++I+D AI +A K +EAGFDA+++EN+GD P+ K K Sbjct: 8 KPLIGMVHLKPLPGSYHYNDNFDDIVDFAIKEAKKLEEAGFDAVMIENFGDAPFKKEADK 67 Query: 66 ETLASFAVIAKEVGREISIPIGINVLRNDCVASYSIAYSVRADFIRVNVLTGVAFTDQGI 125 T+AS AVIAK + E+S+P+GIN+LRND + +YSIAY V+ADFIRVNVL+GVAFTDQGI Sbjct: 68 ITIASMAVIAKAIKEEVSLPLGINILRNDAIGAYSIAYVVKADFIRVNVLSGVAFTDQGI 127 Query: 126 IEGCARELAELRARLPSRIKVLADVHVKHATHFSSFEVALLDTVERGGADAVIITGSRTG 185 IEG A ELA+L+ LPS+IKV ADVHVKHA HF FE +LLDTVERG ADAVII+G RTG Sbjct: 128 IEGKAYELAKLKKLLPSKIKVFADVHVKHAYHFIDFESSLLDTVERGLADAVIISGKRTG 187 Query: 186 SEVDIQELMLAKKISPVPVIVGSGLNPRNIRLFWRYADGFIVGTWVKEGGKTLNEVSLER 245 EVDI++L LAK++ VPVIVGSG N N+R+ W YADGFI+GTW+K+ GK NE+ ++R Sbjct: 188 KEVDIEKLKLAKELVDVPVIVGSGTNYNNLRILWSYADGFIIGTWIKKDGKANNEIDIDR 247 Query: 246 ATRIAKVVKSLR 257 A +I + L+ Sbjct: 248 AKKIVNLANKLK 259 >gi|11498031 conserved hypothetical protein [Archaeoglobus fulgidus] >gi|3915360|sp|O29828|Y419_ARCFU HYPOTHETICAL PROTEIN AF0419 >gi|7448670|pir||C69302 conserved hypothetical protein AF0419 - Archaeoglobus fulgidus >gi|2650208|gb|AAB90814.1| (AE001075) conserved hypothetical protein [Archaeoglobus fulgidus] Length = 246 Score = 225 bits (568), Expect = 4e-58 Identities = 121/249 (48%), Positives = 163/249 (64%), Gaps = 6/249 (2%) Query: 6 KPLIGVVHLLPLPGSPGYRGSIEEILDRAISDAAKYQEAGFDAIILENYGDFPYSKTISK 65 K +IGVVHLLPLPGSP + + ++D+A+ DA +E G DA+ILENYGD P+ K + K Sbjct: 3 KTVIGVVHLLPLPGSPEHT-DLSAVIDKAVKDARAIEEGGADALILENYGDKPFLKEVGK 61 Query: 66 ETLASFAVIAKEVGREISIPIGINVLRNDCVASYSIAYSVRADFIRVNVLTGVAFTDQGI 125 ET+A+ VIA EV R++SI +GINVLRND VA+ +IA +V ADF+RVN L + + +GI Sbjct: 62 ETVAAMTVIACEVKRDVSIGLGINVLRNDAVAALAIAKAVNADFVRVNQLFFTSVSPEGI 121 Query: 126 IEGCARELAELRARLPSRIKVLADVHVKHATHFSSFEVALLDTVERGGADAVIITGSRTG 185 +EG A E+ + + R + AD+ VKHA HF+S E L+ ER ADAVI+TG TG Sbjct: 122 LEGKAGEVMRYKKLVDCRAMIFADIAVKHAVHFASLEDYCLN-AERSLADAVILTGKTTG 180 Query: 186 SEVDIQELMLAKKISPVPVIVGSGLNPRNIRLFWRYADGFIVGTWVKEGGKTLNEVSLER 245 EV ++EL AKK +PV+ GSG+N N ++ DG IVGT++K GG V ER Sbjct: 181 GEVSLEELKYAKKTLKMPVLAGSGVNAENAARILKWCDGVIVGTYIKRGGL----VDAER 236 Query: 246 ATRIAKVVK 254 RI + K Sbjct: 237 VRRIVRAAK 245 >pir||G72475 hypothetical protein APE2448 - Aeropyrum pernix (strain K1) >gi|5106152|dbj|BAA81463.1| (AP000064) 287aa long hypothetical protein [Aeropyrum pernix] Length = 287 Score = 194 bits (489), Expect = 7e-49 Identities = 112/274 (40%), Positives = 161/274 (57%), Gaps = 22/274 (8%) Query: 6 KPLIGVVHLLPLPGSPGYRG-----------SIEEILDRAISDAAKYQEAGFDAIILENY 54 KPL+GVVHL PLPGS GY+ S+EEI++ A+S+A+ Y++AGFD +ILENY Sbjct: 8 KPLLGVVHLPPLPGSTGYKARRYPPRLGKVWSLEEIIEYAVSEASVYEDAGFDGVILENY 67 Query: 55 GDFPYSKTISKETLASFAVIAKEVGREISIPIGINVLRNDCVASYSIAYSVRADFIRVNV 114 GD PY KT +++ I +EV + IP+G+N+LRN V + + AYS FIRVN Sbjct: 68 GDTPYPKTPGPLQVSAMTRIVREVSSAVGIPVGVNMLRNGSVEALASAYSGGGSFIRVNS 127 Query: 115 LTGVAFTDQGIIEGCARELAELRARL----PSRIKVLADVHVKHATHFSSFEVA--LLDT 168 L + +GI+E A LA+ A L RI++LADV VKH+ +A + D Sbjct: 128 LCETRLSPEGILEPDAARLAKSLALLGILEERRIEILADVDVKHSQPLVETSIAQTVRDC 187 Query: 169 VERGGAD--AVIITGSRTGSEVDIQELMLAKKIS---PVPVIVGSGLNPRNIRLFWRYAD 223 +ER G V++TG TG D E++ A + + V +VGSG++ N+ +W AD Sbjct: 188 IERSGVPIAGVVLTGHATGGAPDADEVVAAARTASEYEVKTVVGSGVSQLNLSKYWHIAD 247 Query: 224 GFIVGTWVKEGGKTLNEVSLERATRIAKVVKSLR 257 GFI+G+ +K GGK N + E+A IA + + LR Sbjct: 248 GFIIGSSIKLGGKPWNPIDKEKARLIASLAERLR 281 >gb|AAG20579.1| (AE005129) Vng2518c [Halobacterium sp. NRC-1] Length = 267 Score = 181 bits (455), Expect = 7e-45 Identities = 101/258 (39%), Positives = 150/258 (57%), Gaps = 10/258 (3%) Query: 7 PLIGVVHLLPLPGSPGYR-GSIEEILDRAISDAAKYQEAGFDAIILENYGDFP-YSKTIS 64 P++G+VHL PLPG+PGY G+ I D A+ DA++ + G DA+++EN+GD P Y+ + Sbjct: 10 PVVGMVHLSPLPGAPGYDDGNRPAIRDAALRDASRLEAGGVDALLVENFGDAPFYADDVP 69 Query: 65 KETLASFAVIAKEVGREISIPIGINVLRNDCVASYSIAYSVRADFIRVNVLTGVAFTDQG 124 K +AS A + +++ RE +P+G+NVLRND A+ SIA + ADF+RVNV TG TDQG Sbjct: 70 KHVVASMAALVRDITREAEVPVGVNVLRNDAEAAVSIAAAADADFVRVNVHTGARLTDQG 129 Query: 125 IIEGCARELAELRARL-PSRIKVLADVHVKHATHFSS--FEVALLDTVERGGADAVIITG 181 ++ G A E LR RL + + +LAD+ VKH+ + + + +ERG AD VI +G Sbjct: 130 VVGGQAAETVRLRDRLDAAEVSMLADIDVKHSAALAERPLSEGVAELLERGHADGVIASG 189 Query: 182 SRTGSEVDIQELMLA-----KKISPVPVIVGSGLNPRNIRLFWRYADGFIVGTWVKEGGK 236 + TG D L + + PV VGSG+ + ADG IVGT +K+ G+ Sbjct: 190 AGTGHATDHDHLQAVVDARDRLDADAPVFVGSGVTQETVGATLDLADGAIVGTALKQNGE 249 Query: 237 TLNEVSLERATRIAKVVK 254 T V +R + + Sbjct: 250 TTAPVDGDRVRALVDAAR 267 >sp|P72966|BTPA_SYNY3 PHOTOSYSTEM I BIOGENESIS PROTEIN BTPA >gi|7448669|pir||S74944 hypothetical protein sll0634 - Synechocystis sp. (strain PCC 6803) >gi|1652059|dbj|BAA16984.1| (D90902) hypothetical protein [Synechocystis sp.] >gi|1923214|gb|AAC45087.1| (U37695) biogenesis of thylakoid protein A [Synechocystis PCC6803] Length = 287 Score = 171 bits (430), Expect = 6e-42 Identities = 101/238 (42%), Positives = 144/238 (60%), Gaps = 5/238 (2%) Query: 7 PLIGVVHLLPLPGSPGYRGSIEEILDRAISDAAKYQEAGFDAIILENYGDFPYSKT-ISK 65 P+IGVVHLLPLP S + G++ +++RA +A G D II+EN+ D P+ K + Sbjct: 12 PVIGVVHLLPLPTSARWGGNLTAVIERAEQEATALAAGGVDGIIVENFFDAPFPKQRVDP 71 Query: 66 ETLASFAVIAKEVGREISIPIGINVLRNDCVASYSIAYSVRADFIRVNVLTGVAFTDQGI 125 +++ +I + + P+GINVLRND ++ +IA V A FIRVNVLTGV TDQG+ Sbjct: 72 AVVSAMTLIVDRLQNLVVAPVGINVLRNDAHSALAIASCVGAKFIRVNVLTGVMATDQGL 131 Query: 126 IEGCARELAELRARLPSRIKVLADVHVKHATHFS--SFEVALLDTVERGGADAVIITGSR 183 IEG A EL R L S + +LADV VKHA + A+ DT+ERG AD +I++G Sbjct: 132 IEGNAHELLRYRRELSSDVAILADVLVKHARPLGTPNLTTAVTDTIERGLADGIILSGWA 191 Query: 184 TGSEVDIQELMLAKKISP-VPVIVGSGLNPRNIRLFWRYADGFIVGTWVKEGGKTLNE 240 TGS ++++L LA + PV +GSG + NI + A+G IV + +K G +NE Sbjct: 192 TGSPPNLEDLELATNAAKGTPVFIGSGADEDNIGQLIQAANGVIVASSLKRHG-NINE 248 >sp|Q19408|YSMK_CAEEL HYPOTHETICAL 32.1 KD PROTEIN F13E9.3 IN CHROMOSOME IV PRECURSOR >gi|7499015|pir||T20841 hypothetical protein F13E9.3 - Caenorhabditis elegans >gi|3875846|emb|CAA93406.1| (Z69383) predicted using Genefinder [Caenorhabditis elegans] Length = 298 Score = 118 bits (293), Expect = 7e-26 Identities = 80/264 (30%), Positives = 131/264 (49%), Gaps = 11/264 (4%) Query: 4 GSKPLIGVVHLLPLPGSPGYRGSIEEILDRAISDAAKYQEAGFDAIILENYGDFPYSKT- 62 GS ++ + P +P + IL + +A Y + G D +I+EN D PY K Sbjct: 35 GSGEVVVIGAEKPKDKTPSNTLPMSAILKKVRKEADVYFKNGVDGVIVENMHDVPYVKPP 94 Query: 63 -----ISKETLASFAVIAKEVGREISIPIGINVLRNDCVASYSIAYSVRADFIRVNVLTG 117 +S LAS ++ + GI +L + ++AY+ DFIR Sbjct: 95 ASPEIVSSMALASDQLVKSRDAHHPAALTGIQILAAANREALAVAYTTGMDFIRAEGFVY 154 Query: 118 VAFTDQGIIEGCARELAELRARLPSR-IKVLADVHVKHATHFSSFEVALLDTVERGG--- 173 D+G I+GCA L R+ L + I + D+ KH+ H + +V++ + + Sbjct: 155 SHVADEGWIDGCAGGLLRYRSSLKAENIAIFTDIKKKHSAHSVTSDVSIHEMAKDAKFNC 214 Query: 174 ADAVIITGSRTGSEVDIQELMLAKKISPVPVIVGSGLNPRNIRLFWRYADGFIVGTWVKE 233 AD VI+TGS TGS ++E++ K+ PV++GSG+N +N R F + A GFIVG+ K Sbjct: 215 ADGVIVTGSATGSAASLEEMIQVMKVQEFPVLIGSGINGKNAREFVK-AHGFIVGSDFKI 273 Query: 234 GGKTLNEVSLERATRIAKVVKSLR 257 GG+ N++ R ++ K V +L+ Sbjct: 274 GGEWKNDLDSGRISKFMKHVNTLK 297 >gb|AAF50585.1| (AE003559) CG8607 gene product [Drosophila melanogaster] Length = 278 Score = 109 bits (271), Expect = 2e-23 Identities = 70/248 (28%), Positives = 121/248 (48%), Gaps = 8/248 (3%) Query: 18 PGSPGYRGSIEEILDRAISDAAKYQEAGFDAIILENYGDFPY--SKTISKETLASFAVIA 75 PG+P Y G+ ++ ++ AI +A Y++ DA+++EN D PY + + E +A + Sbjct: 28 PGTPRYAGNWKQTIENAIYEANLYKKHQLDAVLIENMHDIPYVPERLLGAEIVACMTRLG 87 Query: 76 KEVGREI--SIPIGINVLRNDCVASYSIAYSVRADFIRVNVLTGVAFTDQGIIEGCAREL 133 + V I IP G+ VL + +IA + + FIR D+G + CA +L Sbjct: 88 RAVREVIPQEIPCGVQVLACGNKQALAIAKASQLQFIRAEGFVFGHVADEGFTDACAGDL 147 Query: 134 AELRARLPSR-IKVLADVHVKHATHFSSFEVALLDTVERGG---ADAVIITGSRTGSEVD 189 R + + + + D+ KH++H + +V+LL+T D +IITG+ TG Sbjct: 148 LRYRKLIDAEDVLIFTDLKKKHSSHAITADVSLLETAHAAEFFMTDGIIITGTATGHAAS 207 Query: 190 IQELMLAKKISPVPVIVGSGLNPRNIRLFWRYADGFIVGTWVKEGGKTLNEVSLERATRI 249 ++L VP+I+GSG+ NI +++ A I+G+ K G L E+S Sbjct: 208 PEDLQQLSGRVKVPLIIGSGVTRDNIDSYYKDAHAVIIGSHFKRNGNWLEEISEPAVDEF 267 Query: 250 AKVVKSLR 257 + + LR Sbjct: 268 MQKICQLR 275 >sp|P39364|SGCQ_ECOLI PUTATIVE SGC REGION PROTEIN SGCQ >gi|1361076|pir||S56528 hypothetical 29.4K protein (fecI-fimB intergenic region) - Escherichia coli >gi|537144|gb|AAA97199.1| (U14003) ORF_f268a [Escherichia coli] >gi|1790757|gb|AAC77259.1| (AE000501) putative nucleoside triphosphatase [Escherichia coli K12] Length = 268 Score = 95.6 bits (234), Expect = 5e-19 Identities = 72/258 (27%), Positives = 120/258 (45%), Gaps = 8/258 (3%) Query: 6 KPLIGVVHLLPLPGSPGYRGSI--EEILDRAISDAAKYQEAGFDAIILENYGDFPYSKTI 63 K +I + HL LPG P + + ++D+A D Q G DA++ N PY + Sbjct: 12 KAVIAMCHLRALPGDPSFDAQLGMNWVIDKAWDDLMALQNGGVDAVMFSNEFSLPYLTKV 71 Query: 64 SKETLASFAVIAKEVGREISIPIGINVLRNDCVASYSIAYSVRADFIRVNVLTGVAFTDQ 123 ET A+ A I ++ +I IP G+NVL D VAS+ +A + A FIR + TG +D Sbjct: 72 RPETTAAMARIIGQLMSDIRIPFGVNVLW-DPVASFDLAMATGAKFIR-EIFTGAYASDF 129 Query: 124 GIIEGCARELAELRARL-PSRIKVLADVHVKHATHFSSFEVALL--DTVERGGADAVIIT 180 G+ + E + R+ +K L ++ + A + + ++ + TV DA+ ++ Sbjct: 130 GVWDTNVGETIRHQHRIGAGEVKTLFNIVPEAAVYLGNRDICSIAKSTVFNNHPDALCVS 189 Query: 181 GSRTGSEVDIQELMLAKKISP-VPVIVGSGLNPRNIRLFWRYADGFIVGTWVKEGGKTLN 239 G G+ D L K+ P V+ +G+ N+ ADG + T K+ G N Sbjct: 190 GLTAGTRTDSALLKRVKETVPDTVVLANTGVCLENVEEQLSIADGCVTATTFKKDGVFAN 249 Query: 240 EVSLERATRIAKVVKSLR 257 V R ++ + V +R Sbjct: 250 FVDQARVSQFMEKVHHIR 267 Database: ./suso.pep Posted date: Jul 6, 2001 5:57 PM Number of letters in database: 840,471 Number of sequences in database: 2977 Database: /banques/blast2/nr.pep Posted date: Dec 14, 2000 12:46 PM Number of letters in database: 188,266,275 Number of sequences in database: 595,510 Lambda K H 0.320 0.139 0.392 Gapped Lambda K H 0.270 0.0470 0.230 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 91084978 Number of Sequences: 2977 Number of extensions: 3720559 Number of successful extensions: 9097 Number of sequences better than 1.0e-10: 10 Number of HSP's better than 0.0 without gapping: 7 Number of HSP's successfully gapped in prelim test: 3 Number of HSP's that attempted gapping in prelim test: 9070 Number of HSP's gapped (non-prelim): 10 length of query: 259 length of database: 189,106,746 effective HSP length: 56 effective length of query: 203 effective length of database: 155,591,474 effective search space: 31585069222 effective search space used: 31585069222 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.8 bits) X3: 64 (24.9 bits) S1: 41 (21.8 bits) S2: 164 (68.3 bits)