BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB1668 (PAB1668) DE:ATP-BINDING TRANSPORT PROTEIN
(315 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||A75083 ATP-binding transport protein PAB1668 - Pyrococcus a... 629 e-179
emb|CAB37661.1| (AJ224479) cdd4-like protein [Bacillus sphaericus] 195 5e-49
pir||E75122 hypothetical protein PAB1845 - Pyrococcus abyssi (st... 195 5e-49
pir||H71008 probable ATP-binding transport protein - Pyrococcus ... 189 4e-47
emb|CAB60255.1| (AJ250862) MrsF protein [Bacillus sp. HIL-Y85/54... 186 3e-46
gb|AAF99566.1| (AF167161) unknown [Staphylococcus aureus] 183 2e-45
dbj|BAB04164.1| (AP001508) ABC transporter (ATP-binding protein)... 181 8e-45
gi|11498736 ABC transporter, ATP-binding protein [Archaeoglobus ... 179 4e-44
sp|P42332|BCRA_BACLI BACITRACIN TRANSPORT ATP-BINDING PROTEIN BC... 178 6e-44
pir||JC5348 cdd4 protein - Clostridium difficile >gi|1770140|emb... 176 2e-43
pir||T31682 bcrA protein - Bacillus licheniformis >gi|4464278|gb... 176 4e-43
gb|AAB91597.1| (U09819) SpaF [Bacillus subtilis] 174 1e-42
pir||I40516 spaF protein - Bacillus subtilis 174 1e-42
pir||G69803 ABC transporter (ATP-binding protein) homolog yfiL -... 173 2e-42
pir||G71131 probable ATP-binding protein - Pyrococcus horikoshii... 171 7e-42
gb|AAF99691.1|AF267498_1 (AF267498) MutF [Streptococcus mutans] 171 1e-41
pir||C72303 ABC transporter, ATP-binding protein - Thermotoga ma... 168 8e-41
dbj|BAB04537.1| (AP001509) bacitracin ABC transporter (ATP-bindi... 168 1e-40
gb|AAF81232.1| (AF263012) ABC transporter ATP binding protein [S... 164 9e-40
pir||B72334 ABC transporter, ATP-binding protein - Thermotoga ma... 164 2e-39
dbj|BAB06933.1| (AP001518) ABC transporter (ATP-binding protein)... 162 4e-39
pir||A70082 ABC transporter (ATP-binding protein) homolog yxlF -... 162 4e-39
gb|AAC62423.1| (AF084104) NatA [Bacillus firmus] 162 5e-39
pir||B69065 ABC transporter (ATP-binding, daunorubicin resistanc... 162 5e-39
gb|AAG20087.1| (AE005088) ABC transport protein; Trp2 [Halobacte... 161 8e-39
gb|AAC36155.1| (AF003632) PilH [Myxococcus xanthus] 161 1e-38
pir||A70194 ABC transporter, ATP-binding protein homolog - Lyme ... 161 1e-38
pir||H71066 probable ATP-binding transport protein - Pyrococcus ... 161 1e-38
emb|CAB93668.1| (AJ276653) RumF protein [Ruminococcus gnavus] 159 4e-38
pir||S74476 ABC-type transport protein slr1113 - Synechocystis s... 159 5e-38
pir||H75288 ABC transporter, ATP-binding protein - Deinococcus r... 159 5e-38
gb|AAC72253.1| (U91581) LctF [Lactococcus lactis subsp. lactis] 158 7e-38
dbj|BAB04009.1| (AP001508) ABC transporter (ATP-binding protein)... 157 1e-37
dbj|BAB04167.1| (AP001508) ABC transporter (ATP-binding protein)... 155 5e-37
sp|P75776|YBHF_ECOLI HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 155 6e-37
pir||B64816 ABC-type transport protein ybhF - Escherichia coli >... 155 6e-37
sp|P75444|YD34_MYCPN HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 155 6e-37
dbj|BAA75396.1| (AB013378) YhaQ [Bacillus halodurans] 155 6e-37
pir||H75077 abc transporter, ATP-binding protein PAB1696 - Pyroc... 155 6e-37
sp|P22040|Y415_SYNY3 HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 155 8e-37
emb|CAC08286.1| (AL392148) putative ABC transporter ATP-binding ... 154 1e-36
gb|AAD16030.1| (AF082183) ABC transporter MutF [Streptococcus mu... 154 1e-36
dbj|BAB04722.1| (AP001510) ABC transporter (ATP-binding protein)... 153 2e-36
gb|AAG20956.1| (AE005162) daunorubicin resistance ABC transporte... 153 3e-36
pir||F82934 ABC transporter UU093 [imported] - Ureaplasma urealy... 152 4e-36
gb|AAG20473.1| (AE005119) copper transport ATP-binding protein; ... 152 7e-36
pir||A75184 ATP-binding transport protein PAB0434 - Pyrococcus a... 150 2e-35
sp|P54592|YHCH_BACSU HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 150 2e-35
pir||T44443 gliding motility protein [imported] - Flavobacterium... 150 3e-35
pir||T36062 probable ABC-type transport system ATP-binding prote... 150 3e-35
gb|AAK41504.1| ABC transporter, ATP binding protein [Sulfolobus ... 149 5e-35
dbj|BAB08166.1| (AB030831) SrtF [Streptococcus pyogenes] 148 6e-35
gb|AAG19009.1| (AE005000) daunorubicin resistance ABC transporte... 148 8e-35
gb|AAK41395.1| ABC transporter, ATP binding protein [Sulfolobus ... 147 2e-34
pir||C69819 ABC transporter (ATP-binding protein) homolog yhaQ -... 147 2e-34
sp|Q58429|YA23_METJA HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 146 2e-34
pir||S74048 probable daunorubicin resistance protein - Sulfolobu... 146 2e-34
gb|AAK42315.1| ABC transporter, ATP binding protein. [Sulfolobus... 146 2e-34
emb|CAB95908.1| (AL359988) putative ABC transport system ATP-bin... 146 3e-34
gb|AAK40417.1| ABC transporter, ATP binding protein [Sulfolobus ... 146 4e-34
pir||S75436 hypothetical protein c05019 - Sulfolobus solfataricu... 146 4e-34
pir||C69049 ABC transporter (ATP-binding protein) - Methanobacte... 145 7e-34
pir||A83142 probable ATP-binding component of ABC transporter PA... 145 9e-34
pir||S76626 ABC-type transport protein sll0489 - Synechocystis s... 145 9e-34
pir||D72492 probable ABC transporter ATP-binding protein APE2579... 144 1e-33
gb|AAC44357.1| (U43537) ATP-binding protein involved in mithramy... 144 1e-33
pir||B71030 probable ATP-binding transport protein - Pyrococcus ... 143 3e-33
pir||T36505 probable ABC-type transport system ATP-binding compo... 143 3e-33
gi|11499468 daunorubicin resistance ATP-binding protein (drrA) [... 143 3e-33
emb|CAC11868.1| (AL445065) ATP-binding protein related resistanc... 143 3e-33
emb|CAA75761.1| (Y15759) ORF1 [Streptomyces rochei] 141 8e-33
pir||E72364 ABC transporter, ATP-binding protein - Thermotoga ma... 141 1e-32
pir||C83188 probable ATP-binding component of ABC transporter PA... 141 1e-32
dbj|BAB04885.1| (AP001511) ABC transporter (ATP-binding protein)... 141 1e-32
pir||E75108 daunorubicin resistance ATP-binding protein (drra-1)... 140 2e-32
sp|P26946|YATR_BACFI HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 140 2e-32
emb|CAC11986.1| (AL445065) ABC transporter cdd4-like protein Scn... 140 2e-32
pir||S47705 hypothetical protein f648 - Escherichia coli >gi|912... 139 3e-32
emb|CAC11214.1| (AL445063) gliding motility protein (gldA) relat... 139 3e-32
sp|P37624|YHIH_ECOLI HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 139 3e-32
pir||C72568 probable ATP-binding transport protein APE1829 - Aer... 138 7e-32
pir||E69771 ABC transporter (ATP-binding protein) homolog ydbJ -... 138 7e-32
pir||T09008 cdd4-like protein ScnF - Streptococcus pyogenes >gi|... 138 9e-32
emb|CAC11370.1| (AL445063) gliding motility protein related [The... 138 9e-32
pir||T36523 probable ABC-type transport system ATP-binding prote... 138 1e-31
dbj|BAB04773.1| (AP001510) transposase (08)/ABC transporter (ATP... 138 1e-31
pir||C71081 probable resistance ATP-binding protein - Pyrococcus... 137 2e-31
sp|P32010|DRRA_STRPE DAUNORUBICIN RESISTANCE ATP-BINDING PROTEIN... 137 2e-31
dbj|BAA83955.1| (AB024563) YFIL [Bacillus halodurans] 137 2e-31
dbj|BAB05817.1| (AP001514) ABC transporter (ATP-binding protein)... 137 2e-31
pir||H70610 probable ABC-typetransmembrane transport portein - M... 136 3e-31
gb|AAC17172.1| (AF065141) ABC transporter ATP-binding protein ho... 136 4e-31
emb|CAB94564.1| (AL359152) putative ABC transporter ATP-binding ... 136 4e-31
sp|P23703|NODI_RHILO NODULATION ATP-BINDING PROTEIN I >gi|95215|... 135 6e-31
gb|AAB61132.1| (U61158) GdmF [Staphylococcus gallinarum] 135 8e-31
sp|P19844|NOSF_PSEST COPPER TRANSPORT ATP-BINDING PROTEIN NOSF >... 134 1e-30
emb|CAB75312.1| (AL139164) putative ABC transporter ATP-binding ... 134 1e-30
pir||B75076 daunorubicin resistance ATP-binding protein drra PAB... 134 2e-30
pir||E83222 NosF protein PA3394 [imported] - Pseudomonas aerugin... 134 2e-30
sp|P50332|NODI_RHIGA NODULATION ATP-BINDING PROTEIN I >gi|100191... 133 2e-30
pir||H75157 daunorubicin resistance ATP-binding protein (drra-2)... 133 2e-30
pir||G82993 probable ATP-binding/permease fusion ABC transporter... 133 2e-30
gb|AAB61163.1| (U77778) putative ABC transporter subunit [Staphy... 132 4e-30
pir||C69012 ABC transporter (ATP-binding, daunorubicin resistanc... 132 4e-30
pir||C71197 probable ATP-binding transport protein - Pyrococcus ... 132 4e-30
pir||D75447 ABC transporter, ATP-binding protein - Deinococcus r... 132 4e-30
pir||E72384 ABC transporter, ATP-binding protein - Thermotoga ma... 132 7e-30
pir||T36741 probable ABC-type transport system ATP-binding prote... 132 7e-30
pir||C72615 probable transport ATP-binding protein APE1380 - Aer... 131 9e-30
emb|CAB88835.1| (AL353832) putative ABC-transport protein, ATP-b... 131 9e-30
dbj|BAB07612.1| (AP001520) ABC transporter (ATP-binding protein)... 131 9e-30
pir||F70501 probable ABC-typetransport protein - Mycobacterium t... 131 1e-29
pir||D72484 probable ATP-binding protein APE2516 - Aeropyrum per... 130 2e-29
sp|P72335|NODI_RHIS3 NODULATION ATP-BINDING PROTEIN I >gi|153162... 130 3e-29
emb|CAB94566.1| (AL359152) putative ABC transporter ATP-binding ... 130 3e-29
gb|AAK42548.1| ABC transporter, ATP binding protein [Sulfolobus ... 129 3e-29
pir||S34187 probable ABC-type transport protein TnrB2 - Streptom... 129 3e-29
pir||T29454 ABC transport protein - Streptomyces coelicolor >gi|... 129 3e-29
pir||C72336 ABC transporter, ATP-binding protein - Thermotoga ma... 129 3e-29
pir||F72742 probable transport ATP-binding protein APE0471 - Aer... 129 3e-29
pir||D81920 probable ABC-transporter ATP-binding protein NMA0763... 129 3e-29
gb|AAG19180.1| (AE005015) ABC transporter, ATP-binding protein; ... 129 3e-29
gi|11498626 ABC transporter, ATP-binding protein [Archaeoglobus ... 129 4e-29
pir||D72257 hypothetical protein TM1403 - Thermotoga maritima (s... 129 6e-29
sp|P46903|NATA_BACSU ATP-BINDING TRANSPORT PROTEIN NATA (NA+ ABC... 128 7e-29
emb|CAB88481.1| (AL353816) putative ABC transport system ATP-bin... 128 1e-28
gb|AAG34388.1|AF197468_4 (AF197468) ATP/GTP binding protein; Nos... 127 1e-28
sp|P26050|NODI_BRAJA NODULATION ATP-BINDING PROTEIN I >gi|281683... 127 1e-28
prf||1914270A nodulation protein [Bradyrhizobium japonicum] 127 1e-28
dbj|BAB07698.1| (AP001520) ABC transporter (ATP-binding protein)... 127 1e-28
gi|11498611 ABC transporter, ATP-binding protein [Archaeoglobus ... 127 2e-28
gb|AAC80570.1| (AF105431) NodI [Bradyrhizobium sp. SNU001] 127 2e-28
pir||F81183 copper ABC transporter, ATP-binding protein NMB0579 ... 127 2e-28
pir||G64435 cobalt transport ATP-binding protein O homolog - Met... 127 2e-28
gb|AAG32068.1|AF317790_1 (AF317790) ATP-binding transporter AviA... 127 2e-28
pir||T36064 ABC-type transport system ATP-binding protein - Stre... 126 4e-28
pir||T36764 probable ABC-type transport system ATP-binding prote... 126 4e-28
gb|AAG21390.1|AF302051_4 (AF302051) ABC transporter ATP binding ... 126 4e-28
pir||T18288 ABC transport protein - slime mold (Dictyostelium di... 125 5e-28
emb|CAC11998.1| (AL445065) ABC transporter related protein [Ther... 125 5e-28
emb|CAB94554.1| (AL359152) putative ABC transporter, ATP-binding... 125 8e-28
pir||A39025 probable membrane protein, cpn60 5'-region - Synecho... 124 1e-27
gb|AAK41557.1| Antibiotic ABC transporter, ATP binding protein [... 123 2e-27
pir||T36344 probable ABC-type transport system ATP-binding prote... 123 2e-27
dbj|BAB16596.1| (AB037937) ABC2 [Rattus norvegicus] 123 2e-27
gb|AAD32038.1|AF093787_6 (AF093787) ABC transporter homolog CylA... 123 3e-27
emb|CAC11779.1| (AL445064) daunorubicin resistance protein relat... 123 3e-27
pir||F82303 ABC transporter, ATP-binding protein VC0589 [importe... 122 4e-27
gb|AAK42130.1| Antibiotic ABC transporter ATP binding protein [S... 122 6e-27
pir||A70039 ABC transporter (ATP-binding protein) homolog yvfR -... 122 6e-27
sp|P36879|YADG_ECOLI HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 122 7e-27
gi|11499564 ABC transporter, ATP-binding protein [Archaeoglobus ... 122 7e-27
gi|11498739 ABC transporter, ATP-binding protein [Archaeoglobus ... 121 1e-26
pir||T07713 probable ABC-type transport protein T23J7.70 - Arabi... 121 1e-26
pir||A59189 ATP-binding cassette transporter - human (fragment) ... 121 1e-26
gb|AAG09372.1|AF178941_1 (AF178941) ATP-binding cassette sub-fam... 121 1e-26
dbj|BAB04371.1| (AP001509) ABC transporter (ATP-binding protein)... 121 1e-26
sp|Q45460|OPBA_BACSU CHOLINE TRANSPORT ATP-BINDING PROTEIN OPUBA... 120 2e-26
gb|AAD09159.1| (AF047429) putative ATP/GTP binding protein NosF ... 120 2e-26
gb|AAK43187.1| ABC transporter, ATP binding protein, putative [S... 120 3e-26
gb|AAD44229.1|AF143772_35 (AF143772) DrrA [Mycobacterium avium] 120 3e-26
pir||S60124 transport protein homolog C48B4.4 - Caenorhabditis e... 119 4e-26
pir||T42749 ATP-binding cassette transport protein homolog - Cae... 119 4e-26
sp|P34358|YLH4_CAEEL PUTATIVE ABC TRANSPORTER C48B4.4 IN CHROMOS... 119 4e-26
emb|CAA82383.2| (Z29117) contains similarity to Pfam domain: PF0... 119 4e-26
emb|CAA82384.2| (Z29117) contains similarity to Pfam domain: PF0... 119 4e-26
gb|AAF49312.2| (AE003523) CG6052 gene product [Drosophila melano... 119 4e-26
gb|AAG19162.1| (AE005013) Vng0668c [Halobacterium sp. NRC-1] 119 5e-26
emb|CAC08414.1| (AL392178) putative ABC transport system ATP-bin... 118 6e-26
gb|AAC23915.1| (AF000148) ATP-binding cassette transporter [Homo... 118 8e-26
gb|AAD20382.1| (AF125999) daunorubicin resistance protein A [Myc... 118 8e-26
gb|AAC05632.1| (AF001945) rim ABC transporter [Homo sapiens] 118 1e-25
emb|CAA75729.1| (Y15635) ABCR [Homo sapiens] 118 1e-25
sp|P78363|ABCR_HUMAN RETINAL-SPECIFIC ATP-BINDING CASSETTE TRANS... 118 1e-25
pir||B83294 probable ATP-binding component of ABC transporter PA... 118 1e-25
gi|11421340 ATP-binding cassette, sub-family A member 4 [Homo sa... 118 1e-25
gb|AAG35594.1|AF200948_1 (AF200948) ABC1 transporter [Leishmania... 118 1e-25
pir||F82572 sodium ABC transporter ATP-binding protein XF2329 [i... 117 1e-25
gb|AAA21451.1| (U01058) ABC family transporter [Entamoeba histol... 117 2e-25
pir||T07714 probable ABC-type transport protein T23J7.80 - Arabi... 117 2e-25
emb|CAB53353.1| (AJ010260) NosF protein [Paracoccus denitrificans] 117 2e-25
dbj|BAB10070.1| (AB010069) contains similarity to ABC transporte... 117 2e-25
gb|AAB01532.1| (U38418) ProV [Bacillus subtilis] 116 2e-25
sp|O34992|OPCA_BACSU GLYCINE BETAINE/CARNITINE/CHOLINE TRANSPORT... 116 2e-25
gi|6671495 ATP-binding cassette, sub-family A, member 4; ATP-bin... 116 3e-25
sp|P42246|YCBN_BACSU HYPOTHETICAL 31.7 KD PROTEIN IN GLTP-CWLJ I... 116 3e-25
gi|4557876 ATP-binding cassette, sub-family A member 4; ATP bind... 116 4e-25
pir||JN0849 hypothetical 35K protein - Streptomyces lividans >gi... 115 6e-25
gb|AAC48716.1| (U90126) ABC transporter [Bos taurus] 115 6e-25
pir||B75082 phosphate abc transporter, ATP-binding protein (pstb... 115 6e-25
gb|AAG39073.1|AF287263_1 (AF287263) ATP-binding cassette 1, sub-... 115 6e-25
gi|11498898 ABC transporter, ATP-binding protein [Archaeoglobus ... 115 7e-25
pir||S72783 probable ABC-type transport protein B1496_F3_97 - My... 114 1e-24
pir||S76278 ABC-type transport protein sll0759 - Synechocystis s... 114 1e-24
pir||T33783 hypothetical protein Y39D8C.1 - Caenorhabditis elega... 114 1e-24
gi|7304849 ATP-binding cassette 1, sub-family A, member 1 [Mus m... 114 2e-24
pir||T45470 ATP-binding ABC transport protein [imported] - Erysi... 113 3e-24
pir||C70529 probable ABC transporter - Mycobacterium tuberculosi... 113 3e-24
gb|AAF33771.1|AF219259_4 (AF219259) YhbG [Haemophilus ducreyi] 113 3e-24
emb|CAC08315.1| (AL392149) putative ABC transport system ATP-bin... 113 3e-24
gi|5915658 ATP-binding cassette, sub-family A member 1; ATP-bind... 113 4e-24
gb|AAF86276.1|AF275948_1 (AF275948) ABCA1 [Homo sapiens] 113 4e-24
gb|AAF98175.1|AF285167_1 (AF285167) ATP-binding cassette transpo... 113 4e-24
gi|11429275 ATP-binding cassette, sub-family A member 1 [Homo sa... 113 4e-24
pir||G75169 abc transporter ATP-binding protein PAB0350 - Pyroco... 112 5e-24
pir||G75200 cobalt abc transporter, ATP-binding protein (cbio) P... 112 6e-24
gi|11499200 spermidine/putrescine ABC transporter, ATP-binding p... 111 8e-24
pir||A71357 probable ABC transporter, ATP-binding protein (troB)... 111 1e-23
gb|AAD17957.1| (AF106002) toluene tolerance protein Ttg2A [Pseud... 111 1e-23
pir||E70871 hypothetical protein Rv1458c - Mycobacterium tubercu... 111 1e-23
gb|AAF23811.1|AF213822_26 (AF213822) ABC binding protein [Zymomo... 111 1e-23
pir||E71045 probable ABC transporter - Pyrococcus horikoshii >gi... 110 2e-23
pir||T07716 probable ABC-type transport protein T23J7.100 - Arab... 110 2e-23
pir||C69992 ABC transporter (ATP-binding protein) homolog ytgB -... 110 2e-23
gi|10956099 ABC transporter subunit PenJ [Pediococcus pentosaceu... 109 4e-23
pir||D82147 amino acid ABC transporter, ATP-binding protein VC18... 109 4e-23
dbj|BAB10073.1| (AB010069) contains similarity to ABC transporte... 109 4e-23
pir||S77512 ABC-type transport protein slr1901 - Synechocystis s... 109 5e-23
pir||H69999 ABC transporter (ATP-binding protein) homolog ytrB -... 108 9e-23
pir||G83245 probable ATP-binding component of ABC transporter PA... 106 3e-22
pir||A70180 spermidine/putrescine ABC transporter, ATP-binding p... 104 1e-21
pir||G75521 ABC transporter, ATP-binding protein - Deinococcus r... 104 1e-21
sp|Q07756|NODI_AZOCA NODULATION ATP-BINDING PROTEIN I >gi|486720... 104 1e-21
pir||E69162 sulfate transport system ATP-binding - Methanobacter... 104 1e-21
dbj|BAB09013.1| (AB012239) contains similarity to ABC transporte... 104 1e-21
pir||D83090 probable ATP-binding component of ABC transporter PA... 104 2e-21
gb|AAF23272.1|AF101263_2 (AF121672) ABC transporter MreA [Staphy... 103 3e-21
dbj|BAB04758.1| (AP001510) iron (III) dicitrate transport system... 103 3e-21
sp|P31134|POTG_ECOLI PUTRESCINE TRANSPORT ATP-BINDING PROTEIN PO... 102 5e-21
sp|P45031|YRBF_HAEIN HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 102 5e-21
gi|10957143 Potential ABC transporter [Lactococcus lactis] >gi|1... 102 5e-21
pir||E82210 amino acid ABC transporter, ATP-binding protein VC13... 102 5e-21
pir||T43868 phosphate transport system peripheral membrane prote... 102 7e-21
dbj|BAA76420.1| (AB024992) multidrug resistance protein [Cicer a... 102 7e-21
pir||F81929 probable iron-uptake permease ATP-binding protein NM... 101 1e-20
pir||G72418 sugar ABC transporter, ATP-binding protein - Thermot... 100 2e-20
pir||H82808 toluene tolerance protein XF0421 [imported] - Xylell... 100 3e-20
gb|AAD29104.1|AF039835_1 (AF039835) ATPase homolog GbuA [Listeri... 100 4e-20
pir||H72272 sugar ABC transporter, ATP-binding protein - Thermot... 100 4e-20
pir||T35757 probable branched chain amino acid transport ATP-bin... 100 4e-20
emb|CAB95741.1| (AJ276960) putative ABC transporter [Staphylococ... 99 5e-20
pir||T03543 probable cobalt transport system ATP-binding protein... 99 6e-20
emb|CAC05961.1| (AL391763) ATP-binding protein [Streptomyces coe... 99 6e-20
emb|CAB59828.1| (AJ012388) hypothetical protein [Lactococcus lac... 98 1e-19
gb|AAF99584.1|AF207710_9 (AF207710) MutF [Streptococcus mutans] 98 1e-19
gb|AAC05643.1| (AF033673) unknown [Pseudomonas marginalis pv. al... 98 1e-19
pir||E72314 ribose ABC transporter, ATP-binding protein - Thermo... 98 1e-19
gi|9964444 AMV130 [Amsacta moorei entomopoxvirus] >gi|9944653|gb... 98 1e-19
sp|Q57855|Y412_METJA HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 98 2e-19
pir||C64496 ABC transporter ATP-binding protein - Methanococcus ... 97 2e-19
gb|AAD45713.1|AF160811_1 (AF160811) L-arabinose transport, ATP b... 97 2e-19
emb|CAB76078.1| (AL157953) putative ABC transporter ATP-binding ... 97 2e-19
emb|CAB89826.1| (AJ271325) hypothetical protein [Pseudomonas chl... 97 2e-19
gb|AAD29087.1|AF082879_3 (AF082879) FepC [Yersinia enterocolitica] 97 3e-19
gb|AAF57490.1| (AE003792) CG8908 gene product [Drosophila melano... 97 3e-19
gb|AAK42824.1| ABC transporter, ATP binding protein [Sulfolobus ... 97 3e-19
pir||B70118 glycine betaine, L-proline ABC transporter, ATP-bind... 97 3e-19
gb|AAC62409.1| (AF084104) maltose transportor ATP-binding protei... 96 5e-19
dbj|BAA11021.1| (D64144) Putative product of this ORF shows sign... 96 7e-19
gb|AAB51510.1| (U91632) sugar transporter [Agrobacterium tumefac... 95 9e-19
gb|AAC18099.1| (AF058302) ATPase component of putative ABC trans... 95 9e-19
sp|P32721|ALSA_ECOLI D-ALLOSE TRANSPORT ATP-BINDING PROTEIN ALSA... 95 1e-18
pir||G81022 ABC transporter, ATP-binding protein NMB1966 [import... 95 1e-18
emb|CAA65866.1| (X97228) yhbG-pg [Porphyromonas gingivalis] 94 2e-18
pir||F36889 leuD 3'-region hypothetical protein - Lactococcus la... 94 2e-18
sp|Q02151|YLUD_LACLA HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 94 3e-18
pir||T35756 probable branched chain amino acid transport ATP-bin... 94 3e-18
pir||G72290 branched chain amino acid ABC transporter, ATP-bindi... 93 3e-18
pir||B81966 probable ABC transport ATP-binding protein NMA0485 [... 93 5e-18
gi|10957420 iron ABC transporter, ATP-binding protein [Deinococc... 92 6e-18
dbj|BAB07160.1| (AP001518) L-arabinose ABC transporter (ATP-bind... 92 6e-18
pir||G71014 probable dipeptide transport ATP-binding protein dpp... 92 8e-18
pir||E83001 probable ATP-binding component of ABC transporter PA... 92 8e-18
pir||T39978 M-factor ABC-type transport protein mam1 [imported] ... 92 1e-17
sp|P77795|YDCT_ECOLI HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 92 1e-17
pir||T40166 abc transporter - fission yeast (Schizosaccharomyces... 92 1e-17
gb|AAD05298.1| (AF082511) putative ATP-binding protein MglA [Tre... 92 1e-17
emb|CAB55736.1| (AL117387) putative ABC transport protein [Strep... 91 1e-17
emb|CAB69805.1| (AJ243712) putative ABC-transporter [Bacillus ce... 91 1e-17
pir||F81348 ABC transport system ATP-binding protein Cj0774c [im... 91 1e-17
gb|AAF50670.1| (AE003563) CG10226 gene product [Drosophila melan... 91 1e-17
gb|AAB63561.1| (U33937) FbpC [Neisseria gonorrhoeae] >gi|1588874... 91 2e-17
gb|AAD37495.1|AF109162_3 (AF109162) HmuV [Corynebacterium diphth... 91 2e-17
pir||H82355 peptide ABC transporter, ATP-binding protein VC0170 ... 91 2e-17
emb|CAC01581.1| (AL391041) putative branched amino acid transpor... 91 2e-17
pir||E82959 zinc transport protein ZnuC PA5500 [imported] - Pseu... 91 2e-17
gb|AAG20909.1| (AE005157) ABC transporter, ATP-binding protein; ... 91 2e-17
gb|AAK40988.1| ABC transporter, ATP binding protein. [Sulfolobus... 90 2e-17
pir||H70682 probable cysA - Mycobacterium tuberculosis (strain H... 90 2e-17
emb|CAB57615.1| (Y18930) ABC transporter/ATP-binding protein [Su... 90 2e-17
pir||A83621 probable ATP-binding component of ABC transporter PA... 90 2e-17
gb|AAF58271.1| (AE003815) Mdr50 gene product [Drosophila melanog... 90 3e-17
dbj|BAB07378.1| (AP001519) teichoic acid ABC transporter (ATP-bi... 90 3e-17
sp|P55453|Y4FO_RHISN PUTATIVE ABC TRANSPORTER ATP-BINDING PROTEI... 90 4e-17
sp|P46342|YQGK_BACSU HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 89 5e-17
gi|11498492 ribose ABC transporter, ATP-binding protein (rbsA-1)... 89 5e-17
sp|P34712|MDR1_CAEEL MULTIDRUG RESISTANCE PROTEIN 1 (P-GLYCOPROT... 89 7e-17
pir||T23476 hypothetical protein K08E7.9 - Caenorhabditis elegan... 89 7e-17
gb|AAA16186.1| (L07065) P-glycoprotein/multidrug resistance prot... 88 1e-16
pir||A47377 multidrug resistance protein Mdr50 - fruit fly (Dros... 88 1e-16
pir||G75117 dipeptide abc transporter, ATP-binding protein (dppf... 88 1e-16
sp|P42954|TAGH_BACSU TEICHOIC ACID TRANSLOCATION ATP-BINDING PRO... 88 2e-16
gb|AAD43625.1|AF071410_1 (AF071410) ATP-binding cassette multidr... 88 2e-16
sp|Q9ZCM4|Y700_RICPR HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 87 2e-16
pir||T21268 hypothetical protein F22E10.3 - Caenorhabditis elega... 87 2e-16
dbj|BAB04000.1| (AP001508) ABC transporter (ATP-binding protein)... 87 2e-16
pir||D70860 hypothetical protein Rv3041c - Mycobacterium tubercu... 87 3e-16
gi|10955070 agtA [Agrobacterium tumefaciens] >gi|6689864|gb|AAF2... 87 3e-16
pir||C82944 methylgalactoside permease ATP-binding protein UU015... 87 3e-16
dbj|BAA05389.1| (D26358) CmpD [Synechococcus sp.] 86 4e-16
sp|P77509|YPHE_ECOLI HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 86 4e-16
pir||A82184 ABC transporter, ATP-binding protein VC1568 [importe... 85 8e-16
gb|AAC46148.1| (U50597) YfeB [Yersinia pestis] 85 1e-15
sp|P55662|Y4TH_RHISN PROBABLE AMINO-ACID ABC TRANSPORTER ATP-BIN... 85 1e-15
pir||T35450 ABC transporter ATP binding protein - Streptomyces c... 85 1e-15
pir||A82497 ribose ABC transporter, ATP-binding protein VCA0128 ... 85 1e-15
pir||E83288 probable ATP-binding component of ABC transporter PA... 85 1e-15
gb|AAK42789.1| ABC transporter, ATP binding protein [Sulfolobus ... 84 2e-15
pir||B70394 ABC transporter - Aquifex aeolicus >gi|2983576|gb|AA... 84 2e-15
pir||A72688 probable high-affinity branched-chain amino acid tra... 84 2e-15
pir||H81448 probable molybdenum transport ATP-binding protein Cj... 84 2e-15
sp|P35116|NOCP_AGRTU NOPALINE PERMEASE ATP-BINDING PROTEIN P >gi... 84 2e-15
dbj|BAB06710.1| (AP001517) phosphate ABC transporter (ATP-bindin... 84 2e-15
emb|CAC16447.1| (AL450165) putative oligopeptide ABC transporter... 84 2e-15
sp|P36619|PMD1_SCHPO LEPTOMYCIN B RESISTANCE PROTEIN PMD1 >gi|10... 83 3e-15
gb|AAB88657.1| (U62933) multidrug resistance protein 1 [Aspergil... 83 3e-15
pir||T41534 leptomycin B resistance protein, ABC transporter - f... 83 3e-15
gb|AAD37310.1|AF135170_1 (AF135170) ribose ABC transporter [Yers... 83 4e-15
emb|CAB39282.1| (AJ133704) NatA protein [Anabaena sp.] 83 5e-15
pir||D70184 probable ribose/galactose ABC transporter mglA - Lym... 82 7e-15
sp|O52618|NODI_RHIME NODULATION ATP-BINDING PROTEIN I >gi|280954... 82 9e-15
gi|10954825 Probable nocP gene [Agrobacterium tumefaciens] >gi|6... 82 9e-15
gb|AAD55753.1|AF108387_1 (AF108387) transporter associated with ... 82 1e-14
pir||D75579 branched-chain amino acid ABC transporter, ATP-bindi... 82 1e-14
pir||G83031 probable ATP-binding component of ABC transporter PA... 82 1e-14
dbj|BAB07365.1| (AP001519) oligopeptide ABC transporter (ATP-bin... 82 1e-14
sp|P30294|LIVF_SALTY HIGH-AFFINITY BRANCHED-CHAIN AMINO ACID TRA... 81 2e-14
sp|P22731|LIVF_ECOLI HIGH-AFFINITY BRANCHED-CHAIN AMINO ACID TRA... 81 2e-14
pir||S47673 leucine transport protein livF - Escherichia coli >g... 81 2e-14
gb|AAB94549.1| (AF016580) HutD [Vibrio cholerae] 81 2e-14
pir||D81263 probable ABC transport system ATP-binding protein Cj... 81 2e-14
dbj|BAB04188.1| (AP001508) phosphonates transport system [Bacill... 81 2e-14
sp|P47365|MGLA_MYCGE GALACTOSIDE TRANSPORT ATP-BINDING PROTEIN M... 80 3e-14
pir||E82504 phosphate ABC transporter, ATP-binding protein VCA00... 80 3e-14
gb|AAA83887.1| (J05516) livF gene product [Escherichia coli] 80 4e-14
pir||H75586 probable urea/short-chain amide ABC transporter, ATP... 80 4e-14
gb|AAA62693.1| (M57689) sporulation protein [Bacillus subtilis] ... 79 8e-14
pir||T31958 hypothetical protein F02E11.1 - Caenorhabditis elega... 78 1e-13
gi|11498428 branched-chain amino acid ABC transporter, ATP-bindi... 78 1e-13
gb|AAF77616.1|AF151721_2 (AF151721) oligopeptide permease subuni... 78 1e-13
pir||H82417 ABC transporter, ATP-binding protein VCA0782 [import... 78 1e-13
dbj|BAB07815.1| (AB036417) CysA protein [Acetabularia acetabulum] 78 1e-13
pir||T19982 hypothetical protein C47A10.1 - Caenorhabditis elega... 78 1e-13
emb|CAA61526.1| (X89237) oligopeptidepermease [Streptococcus pyo... 77 2e-13
sp|P75516|MGLA_MYCPN GALACTOSIDE TRANSPORT ATP-BINDING PROTEIN M... 77 2e-13
sp|P45247|LOLD_HAEIN LIPOPROTEIN RELEASING SYSTEM ATP-BINDING PR... 77 3e-13
dbj|BAB06054.1| (AP001515) ABC transporter (ATP-binding protein)... 77 3e-13
dbj|BAA90507.1| (AP001111) similar to ABC transporter of Arabido... 76 4e-13
pir||S76273 hypothetical protein - Synechocystis sp. (strain PCC... 76 5e-13
gb|AAG32327.1| (AF305548) oligopeptide permease [Streptococcus p... 76 5e-13
emb|CAB90903.1| (AL355753) putative ABC-transport protein, ATP-b... 76 7e-13
sp|P18766|AMIF_STRPN OLIGOPEPTIDE TRANSPORT ATP-BINDING PROTEIN ... 75 1e-12
pir||T18939 hypothetical protein C05A9.1 - Caenorhabditis elegan... 75 1e-12
gb|AAK43146.1| ABC transporter, ATP binding protein [Sulfolobus ... 73 4e-12
gb|AAD05459.1| (AF064070) putative ABC-2 transporter hydrophilic... 73 4e-12
gb|AAB51079.1| (L40491) leucocin A translocator [Leuconostoc gel... 73 6e-12
pir||G75026 oligopeptide transport ATP-binding protein appd. PAB... 73 6e-12
pir||T34595 ABC-transporter ATP-binding protein - Streptomyces c... 72 7e-12
gb|AAC71714.1| (AF061267) ATPase component HtxD [Pseudomonas stu... 72 7e-12
pir||T47650 ABC transporter-like protein - Arabidopsis thaliana ... 72 1e-11
pir||D82056 ABC transporter, ATP-binding protein VC2608 [importe... 72 1e-11
sp|P57383|LOLD_BUCAI LIPOPROTEIN RELEASING SYSTEM ATP-BINDING PR... 72 1e-11
pir||F71163 probable oligopeptide transport ATP-binding protein ... 71 1e-11
pir||C82442 probable peptide ABC transporter, ATP-binding protei... 71 1e-11
pir||D83419 probable ATP-binding component of ABC transporter PA... 71 1e-11
pir||T21109 hypothetical protein F19B6.4 - Caenorhabditis elegan... 71 2e-11
emb|CAC12447.1| (AL445067) probable dipeptide transport system, ... 70 4e-11
gb|AAC98048.1| (AC005896) putative ABC transporter [Arabidopsis ... 69 5e-11
pir||C81108 ABC transporter, ATP-binding protein NMB1226 [import... 69 5e-11
pir||T47648 ABC transporter-like protein - Arabidopsis thaliana ... 69 5e-11
gb|AAG34709.1|AF320001_2 (AF320001) putative ATP binding protein... 69 5e-11
pir||T47652 ABC transporter-like protein - Arabidopsis thaliana ... 69 6e-11
dbj|BAB09414.1| (AB016893) ABC transporter, ATP-binding protein-... 69 6e-11
dbj|BAB10100.1| (AB015472) ABC transporter [Arabidopsis thaliana] 69 9e-11
>pir||A75083 ATP-binding transport protein PAB1668 - Pyrococcus abyssi (strain
Orsay) >gi|5458478|emb|CAB49966.1| (AJ248286)
ATP-BINDING TRANSPORT PROTEIN [Pyrococcus abyssi]
Length = 315
Score = 629 bits (1605), Expect = e-179
Identities = 315/315 (100%), Positives = 315/315 (100%)
Query: 1 MPTYIIETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYG 60
MPTYIIETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYG
Sbjct: 1 MPTYIIETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYG 60
Query: 61 EIKIIGMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQAREL 120
EIKIIGMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQAREL
Sbjct: 61 EIKIIGMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQAREL 120
Query: 121 MAYTGVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKIL 180
MAYTGVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKIL
Sbjct: 121 MAYTGVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKIL 180
Query: 181 ELAKSGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAKIESTDYDVVVSDNEK 240
ELAKSGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAKIESTDYDVVVSDNEK
Sbjct: 181 ELAKSGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAKIESTDYDVVVSDNEK 240
Query: 241 LLKFLRDKIYVREVWEEEGIVRVKLDERFSEKFFLELPAFLASEKLAIKLFKPHTSPLER 300
LLKFLRDKIYVREVWEEEGIVRVKLDERFSEKFFLELPAFLASEKLAIKLFKPHTSPLER
Sbjct: 241 LLKFLRDKIYVREVWEEEGIVRVKLDERFSEKFFLELPAFLASEKLAIKLFKPHTSPLER 300
Query: 301 ILMKRFNMGWKNGEQ 315
ILMKRFNMGWKNGEQ
Sbjct: 301 ILMKRFNMGWKNGEQ 315
>emb|CAB37661.1| (AJ224479) cdd4-like protein [Bacillus sphaericus]
Length = 311
Score = 195 bits (491), Expect = 5e-49
Identities = 113/300 (37%), Positives = 172/300 (56%), Gaps = 28/300 (9%)
Query: 4 YIIETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIK 63
YI++T+ L+K FGK V N+NL++ KG +YGFLGPNGAGKTTTI+ML G +KP+ G IK
Sbjct: 11 YIVQTQNLSKNFGKEQAVSNINLQIRKGEIYGFLGPNGAGKTTTIRMLLGLMKPSSGTIK 70
Query: 64 IIGMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMAY 123
I ++ ++R++I+ NVG + E P Y +T +E L + ++LG+PK + E++
Sbjct: 71 IFQKDIVKDRIQILANVGSLVENPSYYPHLTAYENLEALRKILGVPK----TRIDEVLQT 126
Query: 124 TGVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILELA 183
+ A K++ S G +QR+ A+AL+ +PELLILDEPT+ LDP G +E I L
Sbjct: 127 VRLKEAANKKVKGFSLGMKQRLGIAAALLHNPELLILDEPTNGLDPSGIIEIRNLIKRLP 186
Query: 184 KS-GKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAKIESTDYDVVVSDNEK-- 240
K G T+ ISSH++SEI++M VG++ G LI Q + + K VS+ EK
Sbjct: 187 KEYGMTIIISSHLLSEIDQMATQVGIVSKGTLIFQDSIEGMRKFAQPKVTFKVSNGEKGW 246
Query: 241 --------LLKFLRDKIYVREVWEEE-------------GIVRVKLDERFSEKFFLELPA 279
+ D I++ E +E+ + RV+ ++R E FL++ A
Sbjct: 247 RSLLANGIKANYQDDVIFLEECSDEKVAHIVQVLVQEGISVFRVEEEKRSLEDIFLQMTA 306
>pir||E75122 hypothetical protein PAB1845 - Pyrococcus abyssi (strain Orsay)
>gi|5458205|emb|CAB49694.1| (AJ248285) hypothetical
protein [Pyrococcus abyssi]
Length = 305
Score = 195 bits (491), Expect = 5e-49
Identities = 102/267 (38%), Positives = 160/267 (59%), Gaps = 3/267 (1%)
Query: 5 IIETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIKI 64
+IE + LTK +GK V NL+L+V KG ++GFLGPNGAGKTTTI + G + P G +++
Sbjct: 3 VIEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSVRL 62
Query: 65 IGMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMAYT 124
+G ++ +E +K +G++PE Y+++T + L + +PK + + EL+
Sbjct: 63 LGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLKLV 122
Query: 125 GVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILELAK 184
G+ + + K++ S G +QR+L A AL+ DPELLILDEPTS LDP G ILE K
Sbjct: 123 GLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQKK 182
Query: 185 SGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAK--IESTDYDVVVSDNEKLL 242
GKTVF SSHI+SE+E + + VG+I G+L G + ++ K +E Y++ V +
Sbjct: 183 QGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYEIKVETKQPFP 242
Query: 243 KF-LRDKIYVREVWEEEGIVRVKLDER 268
+ L D I + ++ + + ++ K D R
Sbjct: 243 EIELPDVIRIEKIADNKVLIFAKSDIR 269
>pir||H71008 probable ATP-binding transport protein - Pyrococcus horikoshii
>gi|3257789|dbj|BAA30472.1| (AP000006) 308aa long
hypothetical ATP-binding transport protein [Pyrococcus
horikoshii]
Length = 308
Score = 189 bits (475), Expect = 4e-47
Identities = 103/270 (38%), Positives = 158/270 (58%), Gaps = 3/270 (1%)
Query: 4 YIIETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIK 63
Y IE ++LTK +GK + NL+ V +G V+GFLGPNGAGKTTTI + G + P G+++
Sbjct: 2 YAIEVEKLTKSYGKFKAIDNLSFVVDEGIVFGFLGPNGAGKTTTILSMLGIIIPDSGDVR 61
Query: 64 IIGMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMAY 123
I+G ++ +E +K +G++PE Y+++T + L + + K + + EL+
Sbjct: 62 ILGYDIFKEPLKAKERLGFLPENATIYEELTAWRNLDFFASFYRMSKQEKEKRIEELLKL 121
Query: 124 TGVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILELA 183
G+ + + K + S G RQR+L A AL+ DPELLILDEPTS LDP G I E
Sbjct: 122 VGLWDVRYRKAKTFSKGMRQRLLLAQALINDPELLILDEPTSGLDPEGARLVKDIIREQR 181
Query: 184 KSGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAK--IESTDYDVVVSDNEKL 241
K GKTVF SSHI+SE+E + + VG+I G+L G + ++ K +E Y++ + + L
Sbjct: 182 KQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYEIKIETKQPL 241
Query: 242 LKF-LRDKIYVREVWEEEGIVRVKLDERFS 270
+ + D I + + E + I+ K D R S
Sbjct: 242 PELEIPDIIRIEKTTENKAIIFAKSDIRES 271
>emb|CAB60255.1| (AJ250862) MrsF protein [Bacillus sp. HIL-Y85/54728]
Length = 303
Score = 186 bits (468), Expect = 3e-46
Identities = 116/300 (38%), Positives = 167/300 (55%), Gaps = 27/300 (9%)
Query: 1 MPTYIIETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYG 60
M I+ T +LTK + K V LNL++ +G +YGFLGPNGAGKTTTI+ML G +KPT G
Sbjct: 1 MNDQIVVTHDLTKKYKKHTSVDGLNLRIRRGEIYGFLGPNGAGKTTTIRMLLGLIKPTKG 60
Query: 61 EIKIIGMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQAREL 120
I+I G + + R++I++ +G + E P Y ++T +E L + RL GLP+ Q E+
Sbjct: 61 NIEIFGQNLNKNRLQILQRIGSLVESPTYYGNLTGYENLEAVRRLRGLPE----QQVNEV 116
Query: 121 MAYTGVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKIL 180
+ + ++A +E S G +QR+ A AL+ P+LLILDEPT+ LDP G E I
Sbjct: 117 LETVRLSKVANRLTKEYSLGMKQRLGIAVALLSSPDLLILDEPTNGLDPSGIQEIRELIK 176
Query: 181 ELAKSGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAKIESTDYDVVVSD--- 237
EL KSG +V +SSH++SEI++M VG+I +G++I Q + L + V VSD
Sbjct: 177 ELPKSGMSVIVSSHLLSEIDQMATQVGIINNGKMIFQDSIASLHQKRKPLLKVGVSDVIE 236
Query: 238 -----NEKLLKFLRDKIY-------------VREVWEEEGIVRVKLDE--RFSEKFFLEL 277
N K LK K Y + + G+ +L+E R E FLEL
Sbjct: 237 AKTILNRKGLKVDLQKNYLWLSQTEPEFVSEINSILLHSGLSVFRLEEKTRSLEDIFLEL 296
>gb|AAF99566.1| (AF167161) unknown [Staphylococcus aureus]
Length = 309
Score = 183 bits (460), Expect = 2e-45
Identities = 103/238 (43%), Positives = 146/238 (61%), Gaps = 4/238 (1%)
Query: 5 IIETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIKI 64
IIE LTK +G + V NL++ V G +YGFLG NGAGKTTTI+ML G +KPT G IKI
Sbjct: 7 IIEINNLTKQYGSQIAVNNLSITVESGQIYGFLGRNGAGKTTTIRMLLGLIKPTKGNIKI 66
Query: 65 IGMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMAYT 124
E + +I++N+G M E P Y ++T E L ++LG+ K+ A+ + E++
Sbjct: 67 FEKEFESNKTEILKNIGAMVETPGFYSNLTAKENLTINAKILGIQKENAIEEVLEIV--- 123
Query: 125 GVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILELAK 184
G+ + S G +QR+ A AL+ +PELLILDEPT+ LDP+G E I +LA+
Sbjct: 124 GLASEKVKLFKNYSLGMKQRLGIARALLHNPELLILDEPTNGLDPIGIKEIRKLIKDLAQ 183
Query: 185 SGK-TVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAKIESTDYDVVVSDNEKL 241
S T+ ISSHI+SEIE++ + VG+I +G L+E+ DL K + VSD EK+
Sbjct: 184 SRNITILISSHILSEIEQLVDKVGIIHNGVLLEEIMYEDLKKKNRQFISISVSDEEKV 241
>dbj|BAB04164.1| (AP001508) ABC transporter (ATP-binding protein) [Bacillus
halodurans]
Length = 306
Score = 181 bits (455), Expect = 8e-45
Identities = 108/302 (35%), Positives = 180/302 (58%), Gaps = 10/302 (3%)
Query: 4 YIIETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIK 63
Y+IET LT + + V +NLKV +G +YGFLGPNGAGKTTTI+ML G +K ++G IK
Sbjct: 6 YLIETNNLTMTYKHVHAVDRINLKVKEGEIYGFLGPNGAGKTTTIRMLLGLIKASHGSIK 65
Query: 64 IIGMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMAY 123
I G ++ + R+ I++N+G + E P Y ++ + L + +++ +PK + + + EL+
Sbjct: 66 IFGKDLKQHRLDILKNIGALVESPSYYPHLSGEDNLETVRKIVKVPKSR-IAEVLELVRL 124
Query: 124 TGVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILELA 183
T ++A K++E S G +QR+ A+AL+ +P L+ILDEPT+ LDP G +E IL L
Sbjct: 125 T---KVADRKVQEYSLGMKQRLAIAAALLANPRLVILDEPTNGLDPAGIIEIRNLILRLP 181
Query: 184 KS-GKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAKIESTDYDVVVSDNEKLL 242
K G TV +SSH++SE+E++ + VG+I G+LI Q + +L K + + S E
Sbjct: 182 KEYGITVLLSSHLLSEVEQVASQVGIIAKGKLIFQDSIEELRKKANRKIFLSTSHPEVAA 241
Query: 243 KFLRDKIYVREVWEEEGIVRVKLDERFSEKFFLELPAFLASEKLAIKLFKPHTSPLERIL 302
L+++ + + G+V +++R E+ + AF+ + + + TS LE I
Sbjct: 242 TILQER-GINVDTQARGLV---MNDRSDEEIAQLVKAFVEKD-IDVYRISDETSSLEEIF 296
Query: 303 MK 304
++
Sbjct: 297 LQ 298
>gi|11498736 ABC transporter, ATP-binding protein [Archaeoglobus fulgidus]
>gi|7445762|pir||G69391 ABC transporter, ATP-binding
protein homolog - Archaeoglobus fulgidus
>gi|2649451|gb|AAB90107.1| (AE001025) ABC transporter,
ATP-binding protein [Archaeoglobus fulgidus]
Length = 294
Score = 179 bits (449), Expect = 4e-44
Identities = 100/253 (39%), Positives = 146/253 (57%), Gaps = 13/253 (5%)
Query: 6 IETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIKII 65
IE + LTK F + ++L V +G ++GFLGPNGAGKTTTI G +KPT G ++I
Sbjct: 4 IEVENLTKVFNGFRALDGISLVVERGEIFGFLGPNGAGKTTTINCCLGLIKPTSGSVRIA 63
Query: 66 GMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMAYTG 125
GM++ + V++ GY+PE Y ++T + L+Y PKD EL+A G
Sbjct: 64 GMDVEEKPVEVKEICGYLPENYGFYPNLTARQNLLYFSEFYANPKDNV----DELLALVG 119
Query: 126 VGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILELAKS 185
+ A K+ E S G +QR+ A AL+ DPE++ LDEPT+ LDP G +F I EL +
Sbjct: 120 LQDSADKKVGEFSRGMKQRLALAQALINDPEVVFLDEPTNGLDPQGIADFRKIIRELNQK 179
Query: 186 GKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAKIESTDYDVVVSDNEKLLKFL 245
GKT F SSHI+SE+ +C+ VG+I G++++ GK+ +L S +VVV +
Sbjct: 180 GKTFFFSSHILSEVREVCSVVGIINRGRIVKVGKISEL----SGSMEVVVQTEPR----- 230
Query: 246 RDKIYVREVWEEE 258
D+ +RE E E
Sbjct: 231 ADESLLREFGEVE 243
>sp|P42332|BCRA_BACLI BACITRACIN TRANSPORT ATP-BINDING PROTEIN BCRA
>gi|7445603|pir||S77627 bacitracin transport protein
bcrA - Bacillus licheniformis >gi|437315|gb|AAA99504.1|
(L20573) TTG start codon [Bacillus licheniformis]
Length = 306
Score = 178 bits (448), Expect = 6e-44
Identities = 102/261 (39%), Positives = 160/261 (61%), Gaps = 5/261 (1%)
Query: 5 IIETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIKI 64
II+T +LTK +G + V +LN+ V +G +YGFLG NGAGKTTTI+ML G +KPT G+I+I
Sbjct: 4 IIKTTDLTKMYGSQKSVDHLNINVKQGDIYGFLGRNGAGKTTTIRMLLGLIKPTSGQIEI 63
Query: 65 IGMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMAYT 124
G + + +I+R +G + E P Y ++T E L+ +++G+ K A+++ E++
Sbjct: 64 FGENFFKNKKEILRRIGSIVEVPGFYANLTARENLLINAKIIGIHKKNAIDEVLEIV--- 120
Query: 125 GVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILELAK 184
G+ + + S G +QR+ A AL+ PELLILDEPT+ LDP+G E I LAK
Sbjct: 121 GLQHETKKLVGKFSLGMKQRLGIARALLHYPELLILDEPTNGLDPIGIKEMRRLIHSLAK 180
Query: 185 SGK-TVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAKIESTDYDVVVSDNEKLLK 243
T+FISSHI+SEIE++ ++VG+I +G+L+E+ L K + +SD K +
Sbjct: 181 ERNITIFISSHILSEIEQLVDHVGIIHEGKLLEEIPFDHLKKRNRKYLEFQLSDQNKAVV 240
Query: 244 FLRDKIYVREV-WEEEGIVRV 263
+ + + ++GI+RV
Sbjct: 241 LMEQHFDIHDYEVHQDGIIRV 261
>pir||JC5348 cdd4 protein - Clostridium difficile >gi|1770140|emb|CAA63569.1|
(X92982) cdd4 [Clostridium difficile]
Length = 301
Score = 176 bits (443), Expect = 2e-43
Identities = 111/306 (36%), Positives = 173/306 (56%), Gaps = 19/306 (6%)
Query: 5 IIETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIKI 64
II T+ L+K + K V +++L+VP+GAVYGFLGPNGAGK+TT+KML G KPT G I I
Sbjct: 4 IIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINI 63
Query: 65 IGMEM-PRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMAY 123
+G E+ + R+ I++++G + E P Y +T E + M RLL LPK K VN+A +++
Sbjct: 64 LGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPK-KNVNEALKIVRL 122
Query: 124 TGVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILELA 183
K+ + S G +QR+ A A+M P+LLILDEPT+ LDP G I +I EL
Sbjct: 123 ENQKN---KKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAG----IEEIRELI 175
Query: 184 KS-----GKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAKIESTDYDVVVSDN 238
KS G TV ISSH++SEI+++ +G+I G+L+ Q +++L + + +
Sbjct: 176 KSLPEKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNV 235
Query: 239 EKLLKFLRDKIYVREVWEEEGIVRVKLDERFSEKFFLELPAFLASEKLAIKLFKPHTSPL 298
K L K Y+ + ++G + + E + ++ L + + + H L
Sbjct: 236 VSAQKLLNTKGYMSLI--QDGYLTI---ENLKDSDVAKINGMLVHSNIDVFRIEEHKKSL 290
Query: 299 ERILMK 304
E I ++
Sbjct: 291 EDIFLE 296
>pir||T31682 bcrA protein - Bacillus licheniformis >gi|4464278|gb|AAD21213.1|
(AF007865) BcrA [Bacillus licheniformis]
Length = 306
Score = 176 bits (441), Expect = 4e-43
Identities = 104/262 (39%), Positives = 161/262 (60%), Gaps = 7/262 (2%)
Query: 5 IIETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIKI 64
II+T +LTK +G + V +LN+ V +G +YGFLG NGAGKTTTI+ML G +KPT G+I+I
Sbjct: 4 IIKTTDLTKMYGSQKSVDHLNINVKQGDIYGFLGRNGAGKTTTIRMLLGLIKPTSGQIEI 63
Query: 65 IGMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMAYT 124
G + + +I+R +G + E P Y ++T E L+ +++G+ K A+++ E++
Sbjct: 64 FGENFFKNKKEILRRIGSIVEVPGFYANLTARENLLINAKIIGIHKKNAIDEVLEIV--- 120
Query: 125 GVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILELAK 184
G+ + + S G +QR+ A AL+ PEL ILDEPT+ LDP+G E I LAK
Sbjct: 121 GLQHETKKLVGKFSLGMKQRLGIARALLHYPELSILDEPTNGLDPIGIKEMRRLIHSLAK 180
Query: 185 SGK-TVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAKIESTDYDVVVSDNEKLLK 243
T+FISSHI+SEIE++ ++VG+I +G+L+E+ L K + +SD K +
Sbjct: 181 ERNITIFISSHILSEIEQLVDHVGIIHEGKLLEEIPFDHLKKRNRKYLEFQLSDQNKAVV 240
Query: 244 FL--RDKIYVREVWEEEGIVRV 263
+ I+ EV ++GI+RV
Sbjct: 241 LMEQHSDIHDYEV-HQDGIIRV 261
>gb|AAB91597.1| (U09819) SpaF [Bacillus subtilis]
Length = 247
Score = 174 bits (436), Expect = 1e-42
Identities = 100/241 (41%), Positives = 145/241 (59%), Gaps = 9/241 (3%)
Query: 1 MPTYIIETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYG 60
M T ++ETK LTK FGK V +++L V K ++YG LGPNGAGK+TT+K+LTG L+ T G
Sbjct: 10 MSTVLLETKSLTKKFGKETAVADVSLTVQKNSIYGLLGPNGAGKSTTLKILTGILRKTSG 69
Query: 61 EIKIIGMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQAREL 120
EI G + R ++ +G + E P YD++T FE + LLGL +D+ + + +
Sbjct: 70 EILFDGHKWKRSD---LQTIGSLIEAPPLYDNLTAFENVKVHATLLGLSEDRIHSVLKTV 126
Query: 121 -MAYTGVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKI 179
M + G R + S G RQR+ A AL+ P+LLILDEPT+ LDP+G E I
Sbjct: 127 DMQHAGKKRAG-----QFSMGMRQRLGIAIALLNHPKLLILDEPTNGLDPIGIQELRDLI 181
Query: 180 LELAKSGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAKIESTDYDVVVSDNE 239
+ G TV +SSHI+SE+E++ +++G+I DG L QG++ +E +VV S E
Sbjct: 182 RSFPQEGITVILSSHILSEVEQIADHIGIIIDGHLGYQGEINKADDLEHLFMEVVKSTRE 241
Query: 240 K 240
K
Sbjct: 242 K 242
>pir||I40516 spaF protein - Bacillus subtilis
Length = 456
Score = 174 bits (436), Expect = 1e-42
Identities = 100/241 (41%), Positives = 145/241 (59%), Gaps = 9/241 (3%)
Query: 1 MPTYIIETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYG 60
M T ++ETK LTK FGK V +++L V K ++YG LGPNGAGK+TT+K+LTG L+ T G
Sbjct: 10 MSTVLLETKSLTKKFGKETAVADVSLTVQKNSIYGLLGPNGAGKSTTLKILTGILRKTSG 69
Query: 61 EIKIIGMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQAREL 120
EI G + R ++ +G + E P YD++T FE + LLGL +D+ + + +
Sbjct: 70 EILFDGHKWKRSD---LQTIGSLIEAPPLYDNLTAFENVKVHATLLGLSEDRIHSVLKTV 126
Query: 121 -MAYTGVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKI 179
M + G R + S G RQR+ A AL+ P+LLILDEPT+ LDP+G E I
Sbjct: 127 DMQHAGKKRAG-----QFSMGMRQRLGIAIALLNHPKLLILDEPTNGLDPIGIQELRDLI 181
Query: 180 LELAKSGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAKIESTDYDVVVSDNE 239
+ G TV +SSHI+SE+E++ +++G+I DG L QG++ +E +VV S E
Sbjct: 182 RSFPQEGITVILSSHILSEVEQIADHIGIIIDGHLGYQGEINKADDLEHLFMEVVKSTRE 241
Query: 240 K 240
K
Sbjct: 242 K 242
>pir||G69803 ABC transporter (ATP-binding protein) homolog yfiL - Bacillus
subtilis >gi|1817536|dbj|BAA11402.1| (D78508) YfiL
[Bacillus subtilis] >gi|2633155|emb|CAB12660.1| (Z99108)
similar to ABC transporter (ATP-binding protein)
[Bacillus subtilis]
Length = 311
Score = 173 bits (435), Expect = 2e-42
Identities = 94/302 (31%), Positives = 162/302 (53%), Gaps = 3/302 (0%)
Query: 5 IIETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIKI 64
+++ + + K +GK+ +V ++ + KG +G LGPNGAGK+TTI M++G + G I +
Sbjct: 1 MLQAENIKKAYGKKTIVKGISFSLKKGESFGLLGPNGAGKSTTISMISGLVPHDSGNITV 60
Query: 65 IGMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMAYT 124
G + +E K + +G +P+ Y +T E L++ G++ GL D+A +A E++ Y
Sbjct: 61 GGYVIGKETAKAKQKIGIVPQEIALYPTLTAHENLMFWGKMYGLTHDEAKKRAAEVLEYV 120
Query: 125 GVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILELAK 184
G+ A +KIE S G ++R+ +ALM PELLI+DEPT +DP R + + +L +
Sbjct: 121 GLTERAKDKIETFSGGMKRRINIGAALMHKPELLIMDEPTVGIDPQSRNHILETVKQLNE 180
Query: 185 SGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAKIESTDYDV---VVSDNEKL 241
+G TV +SH + E+E +C+ +G+I G++I G DL D + V NE
Sbjct: 181 TGMTVIYTSHYMEEVEFLCDRIGIIDQGEMIAIGTKTDLCSRLGGDTIIQLTVSGINEAF 240
Query: 242 LKFLRDKIYVREVWEEEGIVRVKLDERFSEKFFLELPAFLASEKLAIKLFKPHTSPLERI 301
L +R +V +V E +++ + EK L A + + + + LER+
Sbjct: 241 LVAIRSLAHVNDVTVHELELKIDISAAHHEKVVTSLLAEATAHHINLLSLQVQEPNLERL 300
Query: 302 LM 303
+
Sbjct: 301 FL 302
>pir||G71131 probable ATP-binding protein - Pyrococcus horikoshii
>gi|3257230|dbj|BAA29913.1| (AP000003) 312aa long
hypothetical ATP-binding protein [Pyrococcus horikoshii]
Length = 312
Score = 171 bits (430), Expect = 7e-42
Identities = 102/303 (33%), Positives = 163/303 (53%), Gaps = 7/303 (2%)
Query: 5 IIETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIKI 64
+IE LTK++G V + V +G V+GFLGPNGAGKTTTI+MLTG LKPT G++++
Sbjct: 7 VIEAINLTKYYGNFPAVRGVTFSVNEGEVFGFLGPNGAGKTTTIRMLTGVLKPTSGQVRV 66
Query: 65 IGMEMPR--ERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMA 122
+G +M R E++K + +G +PE Y D+T + L MG L GLPK + ++ EL+
Sbjct: 67 LGYDMTREPEKLKARQRMGIVPEMANPYIDLTAMQNLKLMGELYGLPKWEIEKRSIELLK 126
Query: 123 YTGVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILEL 182
+ K+ S G RQR++ A A++ DPEL LDEPTS LD + I +
Sbjct: 127 LFELYEKRNIKVRGFSKGMRQRLVLAMAMIADPELYFLDEPTSGLDVISARIIKDIIRDE 186
Query: 183 AKSGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAKIESTDYDVVVSDNEKLL 242
K+GKT+F+++H +++ +C +G+I+ G+L+ L ++ V VS L
Sbjct: 187 KKAGKTIFLTTHNMNDANELCERIGIIRKGKLVAIDTPEGLKRLTKEHLSVEVS----LK 242
Query: 243 KFLRDKIYVREVWEEEGI-VRVKLDERFSEKFFLELPAFLASEKLAIKLFKPHTSPLERI 301
+ D + E + +VK+ +K E+ + KL I + + LE +
Sbjct: 243 PMMFDPSVLSSALRVERLGDKVKIYTNDPDKTVKEIVEYAKERKLKIVSIRTLSPSLEDV 302
Query: 302 LMK 304
++
Sbjct: 303 FVE 305
>gb|AAF99691.1|AF267498_1 (AF267498) MutF [Streptococcus mutans]
Length = 233
Score = 171 bits (428), Expect = 1e-41
Identities = 96/232 (41%), Positives = 141/232 (60%), Gaps = 7/232 (3%)
Query: 4 YIIETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIK 63
Y++ETK LTK FGK+ V LNLKV + ++YG LGPNG+GK+TT+KM+TG L+ T G I
Sbjct: 3 YMLETKNLTKQFGKQTAVNQLNLKVERHSIYGLLGPNGSGKSTTLKMITGMLRKTSGHIL 62
Query: 64 IIGMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMAY 123
I G + R K + N+G + E P Y+++T E L +LGLP D +++ +++
Sbjct: 63 IDGHDWSR---KDLENIGALIESPPLYENLTARENLKVRTLMLGLP-DSRIDEVLKIVDL 118
Query: 124 TGVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILELA 183
T G+ + + S G +QR+ A AL+ P+LLILDEPT+ LDP+G E I
Sbjct: 119 TNTGK---KRAGQFSMGMKQRLGIAIALLNSPQLLILDEPTNGLDPIGIQELRNLIRSFP 175
Query: 184 KSGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAKIESTDYDVVV 235
G TV ISSHI+SEI+ +++G+I +G L Q ++ +E DVV+
Sbjct: 176 TQGITVIISSHILSEIQMTADHIGIIANGVLGYQDRIHQDEDLEKLFTDVVM 227
>pir||C72303 ABC transporter, ATP-binding protein - Thermotoga maritima (strain
MSB8) >gi|4981569|gb|AAD36105.1|AE001764_8 (AE001764)
ABC transporter, ATP-binding protein [Thermotoga
maritima]
Length = 293
Score = 168 bits (421), Expect = 8e-41
Identities = 102/256 (39%), Positives = 150/256 (57%), Gaps = 11/256 (4%)
Query: 5 IIETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIKI 64
++E ++LTK++GK V + V +G ++GF+GPNGAGKTTTI++L G + P G +I
Sbjct: 3 VVEVRDLTKYYGKSRGVEGVTFSVEEGEIFGFIGPNGAGKTTTIRLLLGLIFPDSGLAEI 62
Query: 65 IGMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMAYT 124
G ++ +E +I +NVGY+P Y ++T+ EFL Y + + +EL
Sbjct: 63 FGKDVLKEGKEIRKNVGYIPGEVSFYPEVTVEEFLRYSASFY---EKVDWDYVKEL---C 116
Query: 125 GVGRLAFNK-IEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILELA 183
GV L K I+ELS G +++V ALM P+LLILDEPT+ LDP+ + F +
Sbjct: 117 GVFSLDTKKRIKELSMGNKKKVAIVQALMHRPKLLILDEPTNGLDPIVQNTFFEILKNEK 176
Query: 184 KSGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAKIESTDYDVVVSDNEKLLK 243
+ G TVF SSHI+SE+ER+C+ V +IKDG++I KV +L + Y VV E L K
Sbjct: 177 EKGTTVFFSSHILSEVERLCDRVAMIKDGRIIRVEKVENL---KGERYKVVRVKGENLEK 233
Query: 244 FLRDKIYVREVWEEEG 259
L+D V + E G
Sbjct: 234 -LKDLAEVNRLKFENG 248
>dbj|BAB04537.1| (AP001509) bacitracin ABC transporter (ATP-binding protein)
[Bacillus halodurans]
Length = 314
Score = 168 bits (420), Expect = 1e-40
Identities = 94/263 (35%), Positives = 156/263 (58%), Gaps = 5/263 (1%)
Query: 3 TYIIETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEI 62
T +I T+ LTK F + ++ NLNL V KG +YGFLGPNGAGKTT +KML +KP+ GEI
Sbjct: 2 TKVITTRNLTKTFQGKEIISNLNLHVNKGEIYGFLGPNGAGKTTVMKMLMNFVKPSAGEI 61
Query: 63 KIIGMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMA 122
++ G + + ++++ +G M E P+ Y+ ++ E L +G K A+ +A E++
Sbjct: 62 ELFGQRLTSQSYEMLKRIGSMIEFPIFYEKLSARENLELHCEYMGYYKPSAIEEALEMVK 121
Query: 123 YTGVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILEL 182
G A +++ S G +QR+ A A+ PELLILDEP + LDP+G E L
Sbjct: 122 LQLTGSKA---VKDFSLGMKQRLGIARAICTKPELLILDEPINGLDPVGIKEIRQLFQTL 178
Query: 183 AKS-GKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAKIESTDYDVVVSDNEKL 241
G T+ ISSHI+SEIE++ + VG+I++G L+ + + D+ ++ +++ D K
Sbjct: 179 CNEYGVTILISSHILSEIEQIADTVGVIRNGMLVAEVALDDIRSQQTEYIELLTYDARKA 238
Query: 242 LKFLRDKIYVREV-WEEEGIVRV 263
L L +++ ++ V ++ ++R+
Sbjct: 239 LYVLDNELGLKNVKLMDQSLIRI 261
>gb|AAF81232.1| (AF263012) ABC transporter ATP binding protein [Streptomyces
griseus subsp. griseus]
Length = 318
Score = 164 bits (412), Expect = 9e-40
Identities = 91/237 (38%), Positives = 143/237 (59%), Gaps = 7/237 (2%)
Query: 3 TYIIETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEI 62
T +IE ++TK FG + LNL VP+G VYG+LGPNGAGK+TTI+ML G +PT G++
Sbjct: 2 TPLIECTDVTKKFGDFTALSRLNLTVPQGVVYGYLGPNGAGKSTTIRMLMGLSRPTSGQV 61
Query: 63 KIIGMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMA 122
+++G + V+ R +GY+P + +TI + L GRL GL D A EL+
Sbjct: 62 RVLGQDPTDPEVR--RRIGYLPGELRLDERLTIGQTLASWGRLRGLT-DTAYRD--ELVQ 116
Query: 123 YTGVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILEL 182
G+ ++ LS+G R++V A M PELLILDEPT+ LDPL + F+ + E
Sbjct: 117 RFGID--PSRRVRGLSTGNRRKVGLVGAFMAKPELLILDEPTNGLDPLMQQVFLATVEEA 174
Query: 183 AKSGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAKIESTDYDVVVSDNE 239
+G++V +SSHI+SE+ER+ + V +++ G+L G ++L + + + + ++ E
Sbjct: 175 RDNGQSVLLSSHILSEVERVADVVAVLQGGRLAASGPTQELRRRAAQRFHITFAEGE 231
>pir||B72334 ABC transporter, ATP-binding protein - Thermotoga maritima (strain
MSB8) >gi|4981322|gb|AAD35875.1|AE001747_18 (AE001747)
ABC transporter, ATP-binding protein [Thermotoga
maritima]
Length = 260
Score = 164 bits (410), Expect = 2e-39
Identities = 83/222 (37%), Positives = 135/222 (60%), Gaps = 1/222 (0%)
Query: 5 IIETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIKI 64
+I + LT+ FG V +++L V G +YGFLGPNGAGKTTTIKMLTG LKPT GE++I
Sbjct: 11 LIVARGLTRKFGDFTAVDHIDLSVRPGEIYGFLGPNGAGKTTTIKMLTGVLKPTEGEVEI 70
Query: 65 IGMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMAYT 124
+GM+M ++I +++G +P+ P Y +T EFL ++ + L +++ + EL
Sbjct: 71 LGMKMSTHEIEIKKSIGVIPDEPKIYSHLTGKEFLDFIIEIYDLKEEEIDKRIAELCEAF 130
Query: 125 GVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILELAK 184
V L ++ E+S G +Q+++ S M P+++ LDEPT LD + + A
Sbjct: 131 KVDYLG-KRVGEMSHGMKQKLMLVSVFMRKPKVIFLDEPTVGLDAKSARILKLLLRKYAD 189
Query: 185 SGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAKI 226
G +F+++HI+ E+MC+ +G+I G+LI +G + +L K+
Sbjct: 190 EGAAIFLTTHILEIAEKMCDRIGIINKGRLIAEGTMEELRKL 231
>dbj|BAB06933.1| (AP001518) ABC transporter (ATP-binding protein) [Bacillus
halodurans]
Length = 318
Score = 162 bits (407), Expect = 4e-39
Identities = 95/260 (36%), Positives = 149/260 (56%), Gaps = 6/260 (2%)
Query: 1 MPTYIIETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYG 60
M II+ E+TK + V +L+L + KG ++G LGPNGAGKTT+I M+ G +PT G
Sbjct: 1 MEEAIIKLNEITKRYDDHYAVDHLSLSIRKGEIFGLLGPNGAGKTTSILMMLGLSEPTSG 60
Query: 61 EIKIIGMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQAREL 120
+++ G++ + +++ R VGY+P+ Y DMT E L+Y L G+ K +A+ +A L
Sbjct: 61 TVQVAGIDSTKYPIEVKRKVGYLPDNVGFYPDMTGMENLLYTASLNGIQKIEAIERANTL 120
Query: 121 MAYTGVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKIL 180
+ G+ A K + S G +QR+ A LM PE++ILDEPT +DP G +F+ I
Sbjct: 121 LEKVGLTEAAKKKTGQYSRGMKQRLGLADVLMKGPEIIILDEPTLGIDPEGVRDFLHLIR 180
Query: 181 ELAKS-GKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGK----VRDLAKIESTDYDVVV 235
L ++ TV + SH + +++++C+ VG+ DG+L+ G V+ L K ES V
Sbjct: 181 NLNQNENLTVLLCSHHLHQVQQVCDRVGIFVDGKLLAYGDLDQLVKRLFKHESVVIHVAA 240
Query: 236 SD-NEKLLKFLRDKIYVREV 254
S +E LL L+ V+ V
Sbjct: 241 SPIDESLLNQLKTIEQVKNV 260
>pir||A70082 ABC transporter (ATP-binding protein) homolog yxlF - Bacillus
subtilis >gi|1783260|dbj|BAA11737.1| (D83026) homologous
to many ATP-binding transport proteins; hypothetical
[Bacillus subtilis] >gi|2636401|emb|CAB15892.1| (Z99123)
similar to ABC transporter (ATP-binding protein)
[Bacillus subtilis]
Length = 295
Score = 162 bits (407), Expect = 4e-39
Identities = 92/250 (36%), Positives = 144/250 (56%), Gaps = 7/250 (2%)
Query: 5 IIETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIKI 64
++ + L K + V N++ V + LGPNGAGKTTT++ML G L PT G IK+
Sbjct: 1 MLSIESLCKSYRHHEAVKNVSFHVNENECVALLGPNGAGKTTTLQMLAGLLSPTSGTIKL 60
Query: 65 IGMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMAYT 124
+G E+ R +GY+P+ P Y MT EFL + GRL GL K K + E++ +
Sbjct: 61 LG-----EKKLDRRLIGYLPQYPAFYSWMTANEFLTFAGRLSGLSKRKCQEKIGEMLEFV 115
Query: 125 GVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILELAK 184
G+ A +I S G +QR+ A AL+ P+ LILDEP S LDP GR E + + EL K
Sbjct: 116 GLHEAAHKRIGGYSGGMKQRLGLAQALLHKPKFLILDEPVSALDPTGRFEVLDMMREL-K 174
Query: 185 SGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAKIESTDYDVVVSDNEKLLKF 244
V S+H++ + E++C+ V ++K+G++ +G++++L + + T+ +S EKL +
Sbjct: 175 KHMAVLFSTHVLHDAEQVCDQVVIMKNGEISWKGELQELKQQQQTNV-FTLSVKEKLEGW 233
Query: 245 LRDKIYVREV 254
L +K YV +
Sbjct: 234 LEEKPYVSAI 243
>gb|AAC62423.1| (AF084104) NatA [Bacillus firmus]
Length = 299
Score = 162 bits (406), Expect = 5e-39
Identities = 88/273 (32%), Positives = 160/273 (58%), Gaps = 6/273 (2%)
Query: 6 IETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIKII 65
++ +TK FG+ V L+L++P G ++G LG NGAGKTTT +M+ G L+PT GE+
Sbjct: 3 LKINNITKRFGQSVAVDQLSLEIPSGEMFGMLGANGAGKTTTFRMMLGLLEPTEGEMTWK 62
Query: 66 GMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMAYTG 125
G ++ R + +GY+PE Y + + + L+Y+GRL G+ K + + R +
Sbjct: 63 GEKIDYSRTNV---IGYLPEERGLYPKLKVRDQLIYLGRLKGMHKKDIIPEMRMWLERFK 119
Query: 126 VGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILELAKS 185
V +IEELS G +Q++ F ++++ PELLILDEP S LDP+ +++L K
Sbjct: 120 VTDYETKRIEELSKGNQQKIQFIASVIHRPELLILDEPFSGLDPVNAELLKEAVIDLKKK 179
Query: 186 GKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAKIESTDYDVVVSDNEKLLKFL 245
G T+ SSH + +E +C ++ +++ G + +G++R++ + S +V + E+ + L
Sbjct: 180 GTTIVFSSHRMDHVEELCQHLCILRHGTPVVKGELREIKR--SFRNKFIVIEGERSFETL 237
Query: 246 RDKIYVREVWEEEGIVRVKL-DERFSEKFFLEL 277
++ V++ +++G VR+++ DE ++ F E+
Sbjct: 238 KNLPGVKKFQQKQGGVRLQVEDEEVAKVIFAEV 270
>pir||B69065 ABC transporter (ATP-binding, daunorubicin resistance) -
Methanobacterium thermoautotrophicum (strain Delta H)
>gi|2622603|gb|AAB85962.1| (AE000909) ABC transporter
(ATP-binding [Methanobacterium thermoautotrophicum]
Length = 350
Score = 162 bits (406), Expect = 5e-39
Identities = 80/211 (37%), Positives = 128/211 (59%)
Query: 4 YIIETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIK 63
Y IET +LTK +G V +LN+K+ K +++GFLGPNGAGKTTTIKMLT + P+ G +
Sbjct: 3 YAIETFDLTKVYGDFKAVDSLNMKIEKNSIFGFLGPNGAGKTTTIKMLTCLIPPSSGTAR 62
Query: 64 IIGMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMAY 123
+ G ++ + ++ + +G +P++ Y+D+T E + G+P+D ++ ELM
Sbjct: 63 VAGYDILKNPDEVRQQIGMVPQKVSLYEDLTARENVEMCADFYGMPEDLKESRIEELMEL 122
Query: 124 TGVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILELA 183
+ A + ++S GQ+Q+V ++L+ P++L LDEPT LDP + I EL
Sbjct: 123 VDIKYAADKPVGQMSGGQQQKVSLVASLIHQPDILFLDEPTIGLDPTTKRVLWDLIDELN 182
Query: 184 KSGKTVFISSHIVSEIERMCNYVGLIKDGQL 214
SG T+ + SH + E+E +C+YVG+I G L
Sbjct: 183 SSGHTIILCSHDMYEVELLCDYVGIINQGVL 213
>gb|AAG20087.1| (AE005088) ABC transport protein; Trp2 [Halobacterium sp. NRC-1]
Length = 249
Score = 161 bits (404), Expect = 8e-39
Identities = 81/213 (38%), Positives = 128/213 (60%), Gaps = 1/213 (0%)
Query: 6 IETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIKII 65
IE + LTK +G + ++L VP G+VYGFLGPNGAGKTTT++MLT ++PT G +
Sbjct: 6 IEARALTKRYGDTTAIERIDLAVPSGSVYGFLGPNGAGKTTTMRMLTTLVEPTSGTATVA 65
Query: 66 GMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMAYTG 125
G+E+ +R ++ N+GY+PE P + ++T E L Y+ L +P +A + +L+
Sbjct: 66 GVEVT-DRASVVPNIGYLPEEPPLHAELTAREQLRYIAGLRDIPDPRAEQRITDLLERFS 124
Query: 126 VGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILELAKS 185
+G A +I S G +Q+ A++ DP++L LDEPTS LDP I +L
Sbjct: 125 LGDDADRRISTYSKGMKQKTGIIQAMLHDPDVLFLDEPTSGLDPRAARTVRDTIADLTAG 184
Query: 186 GKTVFISSHIVSEIERMCNYVGLIKDGQLIEQG 218
TVF+S+HI+ ++ + + VG++ DG L+ +G
Sbjct: 185 DATVFLSTHILPVVDDLADTVGVLYDGSLVTEG 217
>gb|AAC36155.1| (AF003632) PilH [Myxococcus xanthus]
Length = 326
Score = 161 bits (403), Expect = 1e-38
Identities = 84/224 (37%), Positives = 132/224 (58%), Gaps = 4/224 (1%)
Query: 14 FFGKRNV--VYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIKIIGMEMPR 71
FF + V + L+L++ G VYG LGPNGAGK+TTIK+L G ++ + G+ + G P
Sbjct: 26 FFLNKQVKALQGLDLEIAPGQVYGLLGPNGAGKSTTIKILMGLVRASEGQALLFGE--PP 83
Query: 72 ERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMAYTGVGRLAF 131
+R + R VG++PE P Y+ +T EF+ GR+ GL + + ++ G+GR +
Sbjct: 84 DRPHVRRQVGFLPENPSLYEYLTGREFVTLAGRIFGLSGHELDQRVERVLGDVGMGRASD 143
Query: 132 NKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILELAKSGKTVFI 191
+I S G QR A AL+ P LL+LDEPTS LDPLGR + IL G T+
Sbjct: 144 LQIRRYSKGMVQRTALAQALISGPRLLVLDEPTSGLDPLGRRQMRDLILAERAKGTTILF 203
Query: 192 SSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAKIESTDYDVVV 235
+HI+S++E +C+ V ++ G+ +++G V+DL ++ ++VV
Sbjct: 204 CTHIISDVESLCDRVVVLVGGRRVQEGSVQDLVSAKAPSVEMVV 247
>pir||A70194 ABC transporter, ATP-binding protein homolog - Lyme disease
spirochete >gi|2688689|gb|AAC67099.1| (AE001175) ABC
transporter, ATP-binding protein [Borrelia burgdorferi]
Length = 309
Score = 161 bits (403), Expect = 1e-38
Identities = 96/308 (31%), Positives = 178/308 (57%), Gaps = 14/308 (4%)
Query: 5 IIETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIKI 64
+I +++TK +G ++N++ KV +G V G LGPNGAGK+T IK+LT P+ G +KI
Sbjct: 1 MINVEKVTKMYGPFTALFNVSFKVEEGEVLGILGPNGAGKSTLIKILTSFHYPSKGNVKI 60
Query: 65 IGMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMAYT 124
G ++ +I++ +GY+PE+ Y ++++ E+L ++ + G+ K K + +++
Sbjct: 61 FGKDIVEHSKEILQQIGYVPEKLALYPELSVKEYLKFISEIKGVKKLK--KEIDRVISIF 118
Query: 125 GVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILELAK 184
+ + I +LS G RQRV A AL+ +P+L+ILDEPT+ LDP +EF + ELAK
Sbjct: 119 KLKEVEDKLISQLSKGFRQRVGIAGALINNPKLVILDEPTNGLDPNQIIEFKEFLRELAK 178
Query: 185 SGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLA--KIESTDYDVVV---SDNE 239
T+ SSHI+SE+E +C + ++ +G ++ ++ K++ + +++V S+NE
Sbjct: 179 E-STILFSSHILSEVESICKRIIIVNNGVIVADDTKENIIKNKLKEIEIELIVSKKSENE 237
Query: 240 KLLKFLRDKIY---VREVWEEEGIVRVKLDERFSEKFFLELPAFLASEKLAIKLFKPHTS 296
K + ++ I+ E E++ + +KL + +E+ +L +++ + +K P
Sbjct: 238 KKIFNSKNDIFSLIKLEEHEKDLNISLKLSQGKTEE---DLFSYIVKNNIILKAMIPKHE 294
Query: 297 PLERILMK 304
LE+I K
Sbjct: 295 SLEKIFSK 302
>pir||H71066 probable ATP-binding transport protein - Pyrococcus horikoshii
>gi|3257647|dbj|BAA30330.1| (AP000005) 253aa long
hypothetical ATP-binding transport protein [Pyrococcus
horikoshii]
Length = 253
Score = 161 bits (402), Expect = 1e-38
Identities = 76/222 (34%), Positives = 136/222 (61%)
Query: 5 IIETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIKI 64
+I + L K FG + V+ +N V G +YG LGPNG+GK+TT+++L+G + G++ +
Sbjct: 1 MIIVENLRKKFGSKEVLKGINFTVNDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVMV 60
Query: 65 IGMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMAYT 124
G+++ R+ +K+ VGY+PE P Y+ +T EF ++G + +P+D + + L+
Sbjct: 61 AGVDVSRDPMKVKEIVGYVPETPALYESLTPAEFFSFIGGVRRIPQDILEERVKRLVDAF 120
Query: 125 GVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILELAK 184
G+G+ I LS G +Q++ SAL+ DP++LILDE + LDP F + E +
Sbjct: 121 GIGKYMNQLIGTLSFGTKQKISLISALLHDPQVLILDEAMNGLDPKSARIFRELLFEFKE 180
Query: 185 SGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAKI 226
GK++ S+HI++ E MC+ +G+I +G+++ +G + +L +I
Sbjct: 181 EGKSIVFSTHILALAEVMCDRIGIIYEGRIVAEGTIDELREI 222
>emb|CAB93668.1| (AJ276653) RumF protein [Ruminococcus gnavus]
Length = 248
Score = 159 bits (398), Expect = 4e-38
Identities = 96/226 (42%), Positives = 142/226 (62%), Gaps = 15/226 (6%)
Query: 4 YIIETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIK 63
YII T++LTK + V ++L + KG++YGFLGPNGAGK+TT+KML G PT G +
Sbjct: 3 YIITTEKLTKKYKNFTSVNKVSLHIKKGSIYGFLGPNGAGKSTTMKMLLGLTAPTSGSFQ 62
Query: 64 IIGMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMAY 123
I G + P +R+ I++ +G E P Y ++T E L + R+LGLP++ AV A +L+
Sbjct: 63 IDGKQFPNDRLTILKRIGSFIEAPSFYANLTGRENLDIIRRILGLPQN-AVEDALDLVGL 121
Query: 124 TGVG-RLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILEL 182
+ G RLA ++ S G +QR+ A AL+G P +LILDEPT+ LDP G I +I L
Sbjct: 122 SQFGDRLA----KKYSLGMKQRLGLAGALLGRPPILILDEPTNGLDPSG----IHEIRNL 173
Query: 183 AKS-----GKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDL 223
KS TV ISSH++SEIE + + +G++ G+++ +G + DL
Sbjct: 174 IKSLPTFYDCTVLISSHMLSEIELIADDIGILNHGRMLFEGSLDDL 219
>pir||S74476 ABC-type transport protein slr1113 - Synechocystis sp. (strain PCC
6803) >gi|1651700|dbj|BAA16628.1| (D90899) ABC
transporter [Synechocystis sp.]
Length = 332
Score = 159 bits (397), Expect = 5e-38
Identities = 81/220 (36%), Positives = 135/220 (60%), Gaps = 2/220 (0%)
Query: 6 IETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIKII 65
+ T+ LTK F ++ V N++L + +GAVYG +GPNGAGKTT I+ML A +PT GEI +
Sbjct: 14 VVTQGLTKRFDRQGAVTNVDLSIAEGAVYGLMGPNGAGKTTLIRMLATAEEPTKGEIYLF 73
Query: 66 GMEMPR--ERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMAY 123
G + + ++I + +GY+P+ Y+D+ ++++L Y RL L ++ +E++
Sbjct: 74 GDRLVAGADNLRIKQYLGYLPDDYPLYEDLNVWDYLDYFARLYHLKNPGRRHRIQEVLEL 133
Query: 124 TGVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILELA 183
+ ++I LS G +QR+ A ++ +P LL+LDEP S LDPL R +F I L
Sbjct: 134 VQLTSKRHSRINSLSRGMKQRLSLARTIIHEPILLLLDEPVSGLDPLARQQFRDIIRVLQ 193
Query: 184 KSGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDL 223
+G T+ ISSH++S++ +C +G+++ G L+E + DL
Sbjct: 194 AAGMTILISSHVLSDLAELCTAIGVMELGCLVESTTLADL 233
>pir||H75288 ABC transporter, ATP-binding protein - Deinococcus radiodurans
(strain R1) >gi|6460124|gb|AAF11860.1|AE002063_3
(AE002063) ABC transporter, ATP-binding protein
[Deinococcus radiodurans]
Length = 327
Score = 159 bits (397), Expect = 5e-38
Identities = 86/222 (38%), Positives = 135/222 (60%), Gaps = 2/222 (0%)
Query: 2 PTYIIETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGE 61
P +IET+EL K + R VV L L V G V+GFLGPNGAGK+TT+KML G + P+ GE
Sbjct: 12 PGNVIETRELRKVYRDRAVVDGLTLTVGAGEVFGFLGPNGAGKSTTVKMLLGLVIPSGGE 71
Query: 62 IKIIGMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELM 121
+++ V+ +G++PE+ MT EFL + G+L G+ ++ + +++
Sbjct: 72 ARVLCGSPADPAVRA--RLGFLPEQFRFQLWMTAEEFLNFHGQLAGMKSNELRTRVPQVL 129
Query: 122 AYTGVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILE 181
G+G ++ S G QR A A++ P+L+ LDEPTS LDP+GR+E I
Sbjct: 130 EEVGLGGRGGEQLSGYSKGMLQRCGLAGAILARPQLVFLDEPTSALDPIGRVEVREIIER 189
Query: 182 LAKSGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDL 223
L G VF++SH++SE+E++C+ V +K G++++QG +R+L
Sbjct: 190 LKGEGVAVFLNSHLLSEVEQVCDRVAFVKAGRVLQQGSMREL 231
>gb|AAC72253.1| (U91581) LctF [Lactococcus lactis subsp. lactis]
Length = 306
Score = 158 bits (396), Expect = 7e-38
Identities = 95/229 (41%), Positives = 143/229 (61%), Gaps = 17/229 (7%)
Query: 5 IIETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIKI 64
I+ETK+L+K FGK V NL + V KG ++GFLGPNGAGK+TT+KM+ G L PT GE+K+
Sbjct: 6 ILETKKLSKKFGKEYSVRNLTISVKKGDIFGFLGPNGAGKSTTMKMILGLLHPTEGEVKV 65
Query: 65 IGMEMPRE-RVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMAY 123
G ++ + ++++VG + E P Y +++ E L + +LL LP + +++
Sbjct: 66 FGKKLDNSVKNSVLKDVGCLIEEPSFYPNLSGLENLKLVQKLLNLP----YHNIEKVLNI 121
Query: 124 TGVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILELA 183
+ ++ S G +QR+ A AL+ P+LLILDEPT+ LDP G I +I EL
Sbjct: 122 VKLEDQKNKLVKNYSLGMKQRLGIALALIKFPKLLILDEPTNGLDPTG----IREIRELI 177
Query: 184 KS-----GKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAKIE 227
KS G TV ISSH++SEIE++ N V +IK G+L+ +G +L+K+E
Sbjct: 178 KSLPEKYGITVLISSHLLSEIEQIANTVAIIKKGELLYEG---ELSKLE 223
>dbj|BAB04009.1| (AP001508) ABC transporter (ATP-binding protein) [Bacillus
halodurans]
Length = 301
Score = 157 bits (394), Expect = 1e-37
Identities = 94/300 (31%), Positives = 161/300 (53%), Gaps = 33/300 (11%)
Query: 6 IETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIKII 65
+E K +TK + ++ V++ ++ + G G +GPNGAGKTT IKM+T L PT G+I +
Sbjct: 3 LEIKSVTKKYKEKTAVHDFSMDLLSGECVGLIGPNGAGKTTLIKMITNILDPTRGDILLN 62
Query: 66 GMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMAYTG 125
G + ++ R +GY+P+ P Y MT E L++MG+L G+ K K E+++ G
Sbjct: 63 GKRIS----EMKREIGYLPQYPDFYQWMTASETLLFMGQLSGISKKKLTKSIPEILSKVG 118
Query: 126 VGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILELAKS 185
+ +K+ S G +QR+ A AL+ P +++DEP S LDP+GR E + I+E K
Sbjct: 119 LRGEENSKVSTFSGGMKQRLGIAQALLHKPSFIVMDEPVSALDPIGRREVL-NIIEEIKK 177
Query: 186 GKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDL--------AKIESTD------- 230
T+ +S+HI+++ E +C + +IK+G+ IE + +L ++E TD
Sbjct: 178 DSTILLSTHILADAEEICERLVMIKNGEKIEDTTMMELLNRNSKNKIRVEITDESKDWIE 237
Query: 231 --------YDVVVSDNE-----KLLKFLRDKIYVREVWEEEGIVRVKLDERFSEKFFLEL 277
DV V+ N+ K ++ ++ + + + IV+ +LD E+ FL+L
Sbjct: 238 VVKKLNYVQDVEVTGNKVNVEVKNIELHKNMLLANALKHDVNIVKFELDHDTLEELFLKL 297
>dbj|BAB04167.1| (AP001508) ABC transporter (ATP-binding protein) [Bacillus
halodurans]
Length = 307
Score = 155 bits (389), Expect = 5e-37
Identities = 96/265 (36%), Positives = 149/265 (56%), Gaps = 10/265 (3%)
Query: 5 IIETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIKI 64
IIE K L K + VV +++L VP+G V+GFLGPNG+GKTT ++ML G +K G+IKI
Sbjct: 2 IIEAKGLKKIYNHVPVVDDVDLLVPEGEVFGFLGPNGSGKTTVMRMLLGLVKTDGGDIKI 61
Query: 65 IGMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMAYT 124
+G + + R+ I++ VG + E P Y + + L L + +Q + +
Sbjct: 62 LGKSLEKNRLSILKEVGALIETPAYYGHLNAIDNLKIAATLRQIEDH---SQIEKTLDRV 118
Query: 125 GVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILEL-A 183
G+ K++ S G +QR+ A AL+ P+LL+LDEPT+ LDP G E I +L
Sbjct: 119 GLTSSKHKKVKSFSLGMKQRLGIAMALLHQPKLLLLDEPTNGLDPEGIQEMRELIRDLPK 178
Query: 184 KSGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRD-LAKIESTDYDVVVSDNEKLL 242
K G TVF+SSH++ EI+++ + VG+I G L+ QG+ D LA T V + +K+
Sbjct: 179 KEGVTVFVSSHLLGEIDQVASQVGVIYHGSLLYQGQKNDLLASHGGTTVSVHTPEKDKV- 237
Query: 243 KFLRDKIYVREVWEEEGIVRVKLDE 267
+++ V E + + +R K DE
Sbjct: 238 ----EQLLVMEGFHVQKSIRHKEDE 258
>sp|P75776|YBHF_ECOLI HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PROTEIN YBHF
Length = 578
Score = 155 bits (388), Expect = 6e-37
Identities = 88/255 (34%), Positives = 145/255 (56%), Gaps = 10/255 (3%)
Query: 5 IIETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIKI 64
+IE KELTK FG ++N V +G ++G LGPNGAGK+TT KM+ G L PT G+ +
Sbjct: 329 VIEAKELTKKFGDFAATDHVNFAVKRGEIFGLLGPNGAGKSTTFKMMCGLLVPTSGQALV 388
Query: 65 IGMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMAYT 124
+GM++ K +++GYM ++ Y ++T+ + L + + GL + +A N+ M+
Sbjct: 389 LGMDLKESSGKARQHLGYMAQKFSLYGNLTVEQNLRFFSGVYGL-RGRAQNEKISRMSEA 447
Query: 125 -GVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILELA 183
G+ +A + +EL G +QR+ A +LM +P++L LDEPTS +DPL R EF I +
Sbjct: 448 FGLKSIASHATDELPLGFKQRLALACSLMHEPDILFLDEPTSGVDPLTRREFWLHINSMV 507
Query: 184 KSGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAKIESTDYDVVVSDNEKLLK 243
+ G TV +++H + E E C+ +GL+ G+LI G DL + D + + ++
Sbjct: 508 EKGVTVMVTTHFMDEAE-YCDRIGLVYRGKLIASGTPDDLKAQSANDEQPDPTMEQAFIQ 566
Query: 244 FLRDKIYVREVWEEE 258
+ D W++E
Sbjct: 567 LIHD-------WDKE 574
Score = 120 bits (298), Expect = 2e-26
Identities = 73/241 (30%), Positives = 129/241 (53%), Gaps = 3/241 (1%)
Query: 24 LNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIKIIGMEMPRERVKIMRNVGYM 83
L+ + G V G +GP+GAGKTT ++ML G LKP G +IG + + + +GYM
Sbjct: 26 LDCTIHAGYVTGLVGPDGAGKTTLMRMLAGLLKPDSGSATVIGFDPIKNDGALHAVLGYM 85
Query: 84 PERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMAYTGVGRLAFNKIEELSSGQRQ 143
P++ Y+D+T+ E L L + + L+ +T +G +LS G +Q
Sbjct: 86 PQKFGLYEDLTVMENLNLYADLRSVTGEARKQTFARLLEFTSLGPFTGRLAGKLSGGMKQ 145
Query: 144 RVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILELAKSGKTVFISSHIVSEIERMC 203
++ A L+G+P++L+LDEP +DP+ R E + ELA G + S+ + E E+ C
Sbjct: 146 KLGLACTLVGEPKVLLLDEPGVGVDPISRRELWQMVHELAGEGMLILWSTSYLDEAEQ-C 204
Query: 204 NYVGLIKDGQLIEQGKVRDLAKIESTDYDVVVSDNEKLLKFLRDKIYVREVWEEEGIVRV 263
V L+ +G+L+ QG+ + L + + ++ S +E K L+ + + +V +G+++
Sbjct: 205 RDVLLMNEGELLYQGEPKALTQTMAGRSFLMTSPHEGNRKLLQRALKLPQV--SDGMIQG 262
Query: 264 K 264
K
Sbjct: 263 K 263
>pir||B64816 ABC-type transport protein ybhF - Escherichia coli
>gi|1787012|gb|AAC73881.1| (AE000181) putative
ATP-binding component of a transport system [Escherichia
coli K12] >gi|4062352|dbj|BAA35454.1| (D90716) ATP
binding cassette transporter ABC2 [Escherichia coli]
Length = 583
Score = 155 bits (388), Expect = 6e-37
Identities = 88/255 (34%), Positives = 145/255 (56%), Gaps = 10/255 (3%)
Query: 5 IIETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIKI 64
+IE KELTK FG ++N V +G ++G LGPNGAGK+TT KM+ G L PT G+ +
Sbjct: 334 VIEAKELTKKFGDFAATDHVNFAVKRGEIFGLLGPNGAGKSTTFKMMCGLLVPTSGQALV 393
Query: 65 IGMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMAYT 124
+GM++ K +++GYM ++ Y ++T+ + L + + GL + +A N+ M+
Sbjct: 394 LGMDLKESSGKARQHLGYMAQKFSLYGNLTVEQNLRFFSGVYGL-RGRAQNEKISRMSEA 452
Query: 125 -GVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILELA 183
G+ +A + +EL G +QR+ A +LM +P++L LDEPTS +DPL R EF I +
Sbjct: 453 FGLKSIASHATDELPLGFKQRLALACSLMHEPDILFLDEPTSGVDPLTRREFWLHINSMV 512
Query: 184 KSGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAKIESTDYDVVVSDNEKLLK 243
+ G TV +++H + E E C+ +GL+ G+LI G DL + D + + ++
Sbjct: 513 EKGVTVMVTTHFMDEAE-YCDRIGLVYRGKLIASGTPDDLKAQSANDEQPDPTMEQAFIQ 571
Query: 244 FLRDKIYVREVWEEE 258
+ D W++E
Sbjct: 572 LIHD-------WDKE 579
Score = 120 bits (298), Expect = 2e-26
Identities = 73/241 (30%), Positives = 129/241 (53%), Gaps = 3/241 (1%)
Query: 24 LNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIKIIGMEMPRERVKIMRNVGYM 83
L+ + G V G +GP+GAGKTT ++ML G LKP G +IG + + + +GYM
Sbjct: 31 LDCTIHAGYVTGLVGPDGAGKTTLMRMLAGLLKPDSGSATVIGFDPIKNDGALHAVLGYM 90
Query: 84 PERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMAYTGVGRLAFNKIEELSSGQRQ 143
P++ Y+D+T+ E L L + + L+ +T +G +LS G +Q
Sbjct: 91 PQKFGLYEDLTVMENLNLYADLRSVTGEARKQTFARLLEFTSLGPFTGRLAGKLSGGMKQ 150
Query: 144 RVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILELAKSGKTVFISSHIVSEIERMC 203
++ A L+G+P++L+LDEP +DP+ R E + ELA G + S+ + E E+ C
Sbjct: 151 KLGLACTLVGEPKVLLLDEPGVGVDPISRRELWQMVHELAGEGMLILWSTSYLDEAEQ-C 209
Query: 204 NYVGLIKDGQLIEQGKVRDLAKIESTDYDVVVSDNEKLLKFLRDKIYVREVWEEEGIVRV 263
V L+ +G+L+ QG+ + L + + ++ S +E K L+ + + +V +G+++
Sbjct: 210 RDVLLMNEGELLYQGEPKALTQTMAGRSFLMTSPHEGNRKLLQRALKLPQV--SDGMIQG 267
Query: 264 K 264
K
Sbjct: 268 K 268
>sp|P75444|YD34_MYCPN HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PROTEIN MPN334
(F10_ORF326) >gi|2146182|pir||S73828 hypothetical
protein bcrA - Mycoplasma pneumoniae (strain ATCC 29342)
>gi|1674195|gb|AAB96150.1| (AE000049) ABC transporter
ATP-binding protein [Mycoplasma pneumoniae]
Length = 326
Score = 155 bits (388), Expect = 6e-37
Identities = 94/279 (33%), Positives = 157/279 (55%), Gaps = 7/279 (2%)
Query: 3 TYIIETKELTKFFG---KRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTY 59
T I+E K L K FG K ++ ++N + G + F+G NGAGKTTTIK L + +
Sbjct: 4 TPIVEVKHLEKEFGFWRKNRILKDVNFAIMPGEFHAFIGQNGAGKTTTIKCLISSYQRFK 63
Query: 60 GEIKIIGMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARE 119
EI I G+ + K + + Y+PE + + E+L +G+L G +
Sbjct: 64 DEINIDGISNKNAKSKGV--ISYIPEYAVFPKHLNTHEYLYTLGKLSGCSLQTIKEKVDY 121
Query: 120 LMAYTGVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKI 179
+A + L F K + SSGQ+++VL AL DP+LLI+DEPT+NLDP R EF+
Sbjct: 122 WLARFQIEHLRFKKPNDFSSGQKKKVLLIQALFNDPKLLIMDEPTANLDPKTRNEFMDVC 181
Query: 180 LEL-AKSGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAKIESTDYDVVVSDN 238
EL ++ VF+SSHI++E+E C+ + +I +G+++ GK +++AK ++ Y + V+++
Sbjct: 182 YELNVRNKMAVFVSSHILAELENYCDSLTVIHEGEILFNGKTKNIAK-DNFGYRLKVNNS 240
Query: 239 EKLLKFLRDKIYVREVWEEEGIVRVKLDERFSEKFFLEL 277
+ L K+L+ + + + +V L ++ S KF +EL
Sbjct: 241 DSLRKWLKAQKIAYKYFPATDDFQVDLKQKQSNKFAVEL 279
>dbj|BAA75396.1| (AB013378) YhaQ [Bacillus halodurans]
Length = 314
Score = 155 bits (388), Expect = 6e-37
Identities = 91/265 (34%), Positives = 149/265 (55%), Gaps = 8/265 (3%)
Query: 2 PTYIIETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGE 61
P I++ +TK FG + +NL+V +G +YGF+GPNGAGK+TTI++L G LK + GE
Sbjct: 9 PMEIVKATNVTKRFGAFTALNRINLEVQRGEIYGFIGPNGAGKSTTIRILLGILKASEGE 68
Query: 62 IKIIGMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELM 121
KI G ++ + V+I +++ Y+P + ++T E + +L G K + E
Sbjct: 69 AKIFGKDVWSDAVEIHKHLAYVPGDVSLWPNLTGGEVIDLFMKLRGSVDKKRRDHFIERF 128
Query: 122 AYTGVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILE 181
K S G RQ+V +A +L ILDEPTS LDPL F +LE
Sbjct: 129 KLD-----PSKKCRTYSKGNRQKVALVAAFASGADLYILDEPTSGLDPLMERVFQECVLE 183
Query: 182 LAKSGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAKIESTDYDVVVSDNEKL 241
++GK+V +SSHI+SE+ER+C+ VG+I+ G++IE G + +L + T +V ++
Sbjct: 184 AKEAGKSVLLSSHILSEVERLCDKVGIIRQGEMIETGTLDELRHLTRT---TLVVKTKQP 240
Query: 242 LKFLRDKIYVREVWEEEGIVRVKLD 266
+ L+++ V ++ E+ G ++D
Sbjct: 241 IPALQEQKGVHDLAEKNGGFSFQVD 265
>pir||H75077 abc transporter, ATP-binding protein PAB1696 - Pyrococcus abyssi
(strain Orsay) >gi|5458437|emb|CAB49925.1| (AJ248286)
ABC transporter, ATP-binding protein [Pyrococcus abyssi]
Length = 253
Score = 155 bits (388), Expect = 6e-37
Identities = 76/226 (33%), Positives = 137/226 (59%)
Query: 5 IIETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIKI 64
+I + L K FG + V+ ++ V G +YG LGPNG+GK+TT+++L+G + G++ +
Sbjct: 1 MIIVENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIV 60
Query: 65 IGMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMAYT 124
G+E+ ++ +++ R VGY+PE P Y+ +T EF ++G + G+PKD + R+L+
Sbjct: 61 GGVEVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAF 120
Query: 125 GVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILELAK 184
+ + I LS G +Q++ S+L+ DP++LILDE + LDP F + E +
Sbjct: 121 EIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKE 180
Query: 185 SGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAKIESTD 230
GK++ S+H+++ E +C+ VG+I G++I +G V +L +I +
Sbjct: 181 EGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKEE 226
>sp|P22040|Y415_SYNY3 HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PROTEIN SLL0415
>gi|7445812|pir||S74323 ABC-type transport protein
sll0415 - Synechocystis sp. (strain PCC 6803)
>gi|1001104|dbj|BAA10241.1| (D64001) ABC transporter
[Synechocystis sp.]
Length = 354
Score = 155 bits (387), Expect = 8e-37
Identities = 91/264 (34%), Positives = 151/264 (56%), Gaps = 18/264 (6%)
Query: 5 IIETKELTKFFG-------KRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKP 57
++ET E++K + K + L++ V +G +G LGPNGAGKTT +K+L G ++
Sbjct: 47 VVETWEISKIYRTGFWMNQKVESLKPLSIAVQQGETFGLLGPNGAGKTTLLKILLGVIRA 106
Query: 58 TYGEIKIIGMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQA 117
+ G ++G + + K + VGY+PE YD +T +EFL Y+G L + K + +
Sbjct: 107 SGGRGTLLGKPIGDRQTK--QRVGYLPENAYFYDFLTAWEFLDYIGSLFQIGKQERQRRI 164
Query: 118 RELMAYTGVGRLAFNK--IEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEF 175
+ G+ + K + + S G QRV A AL+ DPE++ LDEP S LDPLGR +
Sbjct: 165 LAMCDLVGLAQKTAKKKQLRQYSKGMLQRVGMAQALINDPEVVFLDEPMSGLDPLGRYQV 224
Query: 176 IGKILELAKSGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAKIESTD--YDV 233
IL L + GKT+F +SHI++++E++C+ + ++ G+L+ G LA++ D Y+V
Sbjct: 225 REIILSLKEQGKTIFFNSHILADVEQICDRIAILARGELLCSG---SLAEVLGNDEGYEV 281
Query: 234 VV--SDNEKLLKFLRDKIYVREVW 255
V+ + E L K+L + ++VW
Sbjct: 282 VLKGGEEEALGKYLANLSQEQDVW 305
>emb|CAC08286.1| (AL392148) putative ABC transporter ATP-binding protein
[Streptomyces coelicolor]
Length = 327
Score = 154 bits (386), Expect = 1e-36
Identities = 91/223 (40%), Positives = 130/223 (57%), Gaps = 4/223 (1%)
Query: 5 IIETKELTKFF-GKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIK 63
+I T+ LTK + G + V L+L VP G+V+GFLGPNG+GKTTTI+ML G ++PT G +
Sbjct: 21 VIATRALTKRYRGGQLAVDGLDLTVPAGSVFGFLGPNGSGKTTTIRMLMGLIEPTSGSAR 80
Query: 64 IIGMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMAY 123
++G MPR ++ VG + E P Y ++ + L+ D + R A
Sbjct: 81 VLGRPMPRAARAVLPRVGALIEGPALYGFLSGRDNLLRYDAA-DPTADPRTRRERVAAAL 139
Query: 124 TGVGRLAFN--KIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILE 181
VG A K + S G +QR+ A+AL+ LL+LDEPT+ LDP G E + E
Sbjct: 140 DRVGLAAAGGKKAKAYSLGMKQRLGLAAALLQPRRLLVLDEPTNGLDPQGMREIRSLVRE 199
Query: 182 LAKSGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLA 224
LA G TVF+SSH++ EIE++C + ++ G+LI QG V DLA
Sbjct: 200 LASDGTTVFLSSHLLDEIEQVCTHAAVMAQGRLITQGAVADLA 242
>gb|AAD16030.1| (AF082183) ABC transporter MutF [Streptococcus mutans]
Length = 302
Score = 154 bits (385), Expect = 1e-36
Identities = 91/243 (37%), Positives = 137/243 (55%), Gaps = 6/243 (2%)
Query: 5 IIETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIKI 64
++ L+K FG + V+ +LN+ + G +YGFLG NGAGK+T +K++ G L GEI
Sbjct: 5 LLSINNLSKSFGNQKVLDHLNMTISPGEIYGFLGVNGAGKSTAMKIILGLLPKDSGEIVA 64
Query: 65 IGMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMAYT 124
+G +P R +I+ +G + E P Y ++T FE L + L LPKD + +M T
Sbjct: 65 LGRPLPENRSQILPEIGALIEEPAFYPNLTGFENLQLIQELANLPKD----NIKVVMEAT 120
Query: 125 GVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILEL-A 183
G+ + S G +QR+ + AL+ P+ LILDEPT+ LDP G + I L
Sbjct: 121 GIYYAKDKLVRNYSLGMKQRLGISMALIKFPKFLILDEPTNGLDPDGIHQMRQLIRSLPQ 180
Query: 184 KSGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAKIESTDYDVVVSDNEKLLK 243
K T+ ISSHI+SEIE + + VG+IKDG LI +G + L E Y + V++ EK +
Sbjct: 181 KFNMTILISSHILSEIENLADTVGIIKDGHLIYEGGINQLLNQEQ-KYQLKVNNLEKAAQ 239
Query: 244 FLR 246
++
Sbjct: 240 IIQ 242
>dbj|BAB04722.1| (AP001510) ABC transporter (ATP-binding protein) [Bacillus
halodurans]
Length = 305
Score = 153 bits (384), Expect = 2e-36
Identities = 90/262 (34%), Positives = 148/262 (56%), Gaps = 8/262 (3%)
Query: 5 IIETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIKI 64
I++ +TK FG + +NL+V +G +YGF+GPNGAGK+TTI++L G LK + GE KI
Sbjct: 3 IVKATNVTKRFGAFTALNRINLEVQRGEIYGFIGPNGAGKSTTIRILLGILKASEGEAKI 62
Query: 65 IGMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMAYT 124
G ++ + V+I +++ Y+P + ++T E + +L G K + E
Sbjct: 63 FGKDVWSDAVEIHKHLAYVPGDVSLWPNLTGGEVIDLFMKLRGSVDKKRRDHFIERFKLD 122
Query: 125 GVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILELAK 184
K S G RQ+V +A +L ILDEPTS LDPL F +LE +
Sbjct: 123 -----PSKKCRTYSKGNRQKVALVAAFASGADLYILDEPTSGLDPLMERVFQECVLEAKE 177
Query: 185 SGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAKIESTDYDVVVSDNEKLLKF 244
+GK+V +SSHI+SE+ER+C+ VG+I+ G++IE G + +L + T +V ++ +
Sbjct: 178 AGKSVLLSSHILSEVERLCDKVGIIRQGEMIETGTLDELRHLTRT---TLVVKTKQPIPA 234
Query: 245 LRDKIYVREVWEEEGIVRVKLD 266
L+++ V ++ E+ G ++D
Sbjct: 235 LQEQKGVHDLAEKNGGFSFQVD 256
>gb|AAG20956.1| (AE005162) daunorubicin resistance ABC transporter ATP-binding
protein; Trp6 [Halobacterium sp. NRC-1]
Length = 263
Score = 153 bits (382), Expect = 3e-36
Identities = 85/218 (38%), Positives = 124/218 (55%), Gaps = 1/218 (0%)
Query: 6 IETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIKII 65
I T +LTK +G V L + G VYGFLGPNGAGKTTTI+MLT +PT G +
Sbjct: 7 ITTDDLTKEYGDTTAVSGFTLAIEAGHVYGFLGPNGAGKTTTIRMLTALTEPTSGAGHVA 66
Query: 66 GMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMAYTG 125
G + R I+ ++GY+PE P YD++T E L Y G L + + ++ EL+
Sbjct: 67 GHPITN-RQAIIPHIGYLPELPPIYDELTAREQLEYHGGLRDMDPVEIEDRIEELLDRFD 125
Query: 126 VGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILELAKS 185
+ A ++I S G +Q+ ALM +P+++ILDEPTS LDP I ELA
Sbjct: 126 LTGDADDRISTYSKGMKQKTGLVQALMHEPDVVILDEPTSGLDPRAARTVRDTITELAAG 185
Query: 186 GKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDL 223
+TVF+S+HI+ + + VG++ DG+L+ +G +L
Sbjct: 186 DRTVFLSTHILPVVAELATEVGILYDGELVAEGAPEEL 223
>pir||F82934 ABC transporter UU093 [imported] - Ureaplasma urealyticum
>gi|6899047|gb|AAF30499.1|AE002109_2 (AE002109) ABC
transporter [Ureaplasma urealyticum]
Length = 236
Score = 152 bits (381), Expect = 4e-36
Identities = 88/235 (37%), Positives = 133/235 (56%), Gaps = 5/235 (2%)
Query: 4 YIIETKELTKFFGKRNV-VYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEI 62
+I+E K LTK + K N V++L+ V +G ++ F+G NG+GKTTTIK + A G I
Sbjct: 5 FILEVKNLTKIYKKSNQGVFDLSFNVKRGEIHAFIGENGSGKTTTIKSIINAYTNYKGSI 64
Query: 63 KIIGMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMA 122
I G + + K +GY+PE L ++T F++L RL L K +A+ + +
Sbjct: 65 LIDGFD--NKTPKSHEKIGYVPEIALFPSELTTFQYLYSFARLSNLNKKQAIERIHNFLE 122
Query: 123 YTGVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILEL 182
+ L K SSGQ+++V+ AL+ DPEL+ILDEPT+NLDP R EF + EL
Sbjct: 123 KFRISDLKNKKPINFSSGQKKKVILIQALLHDPELIILDEPTANLDPSARHEFNNILKEL 182
Query: 183 AKSGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAKIESTDYDVVVSD 237
+ KT+FI SHI+ E++ + + LI G+L+ G D +E YD V+ +
Sbjct: 183 HEQNKTIFICSHILKEMDTYVDSLTLIHKGKLVYSGHKYD--ALEKIYYDSVLKN 235
>gb|AAG20473.1| (AE005119) copper transport ATP-binding protein; NosF1
[Halobacterium sp. NRC-1]
Length = 304
Score = 152 bits (379), Expect = 7e-36
Identities = 82/225 (36%), Positives = 128/225 (56%), Gaps = 7/225 (3%)
Query: 6 IETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIKII 65
IE ++K +G + +LN+ V +G +YGFLGPNGAGK+T I +L ++PT G I+
Sbjct: 4 IELSGVSKRYGDVTALTDLNITVDEGEIYGFLGPNGAGKSTAINILLDFVRPTTGSATIL 63
Query: 66 GMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMAYTG 125
G + + I + +G +PE YD +T + + + + A N L+ G
Sbjct: 64 GYDAQADSQAIRQRIGVLPEGFSVYDRLTARKHVEF-----AIDSKNATNDPDALLDRVG 118
Query: 126 VGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILELAKS 185
+ A K S+G RQR+ A AL+GDPE+L+LDEP+S LDP G E + E A
Sbjct: 119 IPEAADRKAGGFSTGMRQRLGLAIALVGDPEMLLLDEPSSGLDPNGAREMRSILTEEANR 178
Query: 186 GKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAKIESTD 230
G TVF SSHI+ ++E +C++ G++++G L+ + + L E+TD
Sbjct: 179 GTTVFFSSHILGQVEAICDHAGILQNGTLVAEDSIDALR--EATD 221
>pir||A75184 ATP-binding transport protein PAB0434 - Pyrococcus abyssi (strain
Orsay) >gi|5458062|emb|CAB49552.1| (AJ248284)
ATP-BINDING TRANSPORT PROTEIN [Pyrococcus abyssi]
Length = 244
Score = 150 bits (376), Expect = 2e-35
Identities = 78/218 (35%), Positives = 125/218 (56%)
Query: 6 IETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIKII 65
+ L K +GK + ++ ++ +G ++G +GPNGAGK+TT+K+L L PT G ++
Sbjct: 7 VAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEVF 66
Query: 66 GMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMAYTG 125
G ++ +E ++ + + Y+PE AY +T E+L +M +L KA + + +G
Sbjct: 67 GHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIELSG 126
Query: 126 VGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILELAKS 185
+G +K+ S G +R+L A ALM P+L ILDEPTS LD + E I E +K
Sbjct: 127 LGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFSKE 186
Query: 186 GKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDL 223
G T ISSH + E+E +C+ V LI G+++E G R+L
Sbjct: 187 GVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPREL 224
>sp|P54592|YHCH_BACSU HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PROTEIN 2 IN GLPD-CSPB
INTERGENIC REGION >gi|7445695|pir||D69822 ABC
transporter (ATP-binding protein) homolog yhcH -
Bacillus subtilis >gi|1239983|emb|CAA65691.1| (X96983)
hypothetical protein [Bacillus subtilis]
>gi|2633231|emb|CAB12736.1| (Z99108) similar to ABC
transporter (ATP-binding protein) [Bacillus subtilis]
Length = 305
Score = 150 bits (375), Expect = 2e-35
Identities = 95/296 (32%), Positives = 165/296 (55%), Gaps = 28/296 (9%)
Query: 5 IIETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIKI 64
++E K +TK R ++ +L+ + +G V+GFLGPNGAGKTTTI+M+ G +K + G++ I
Sbjct: 4 VLELKNVTKNIRGRTIIDDLSFTIREGEVFGFLGPNGAGKTTTIRMMVGLMKLSKGDVLI 63
Query: 65 IGMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLL-GLPKDKAVNQARELMAY 123
G + +E K ++++G + E P Y ++ ++ L R++ G+ K+K E++
Sbjct: 64 CGQSITKEYAKAIKHIGAIVENPELYKFLSGYKNLQQFARMVKGVTKEK----IDEVVEL 119
Query: 124 TGVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILELA 183
G+ +K++ S G RQR+ A L+ DP++LILDEPT+ LDP G E + +L
Sbjct: 120 VGLTDRIHDKVKTYSLGMRQRLGLAQCLLHDPKVLILDEPTNGLDPAGIREIRDHLKKLT 179
Query: 184 KS-GKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAKIESTD------------ 230
+ G V +SSH++SE+E MC+ + +++ G+LI+ V+D I+ D
Sbjct: 180 RERGMAVIVSSHLLSEMELMCDRIAILQKGKLIDIQNVKD-ENIDENDTYFFQVEQPSEA 238
Query: 231 ------YDVVVSDNEKLLKFLRDKI-YVRE--VWEEEGIVRVKLDERFSEKFFLEL 277
YD++ N +K ++++ V E V ++ I VK+ + E FLE+
Sbjct: 239 ATVLNQYDLLSKTNGVEIKLAKEEVPAVIELLVMQQIRIYEVKVITKSLEDRFLEM 294
>pir||T44443 gliding motility protein [imported] - Flavobacterium johnsoniae
>gi|2281663|gb|AAC19751.1| (AF007381) gliding motility
protein [Flavobacterium johnsoniae]
Length = 298
Score = 150 bits (374), Expect = 3e-35
Identities = 79/218 (36%), Positives = 131/218 (59%), Gaps = 5/218 (2%)
Query: 6 IETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIKII 65
IE ++K +G++ + ++ K+ KG + GFLGPNGAGK+T +K+LT L G +
Sbjct: 3 IEVNSISKSYGEQKALNEISFKIEKGEIVGFLGPNGAGKSTLMKILTTYLLADSGSALVN 62
Query: 66 GMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMAYTG 125
G ++ + +++GY+PE Y D+ + E+L + + +PK ++ E++ TG
Sbjct: 63 GHDVMTNAKAVQQSIGYLPEHNPLYLDLYVREYLAFNADVYKVPK----SRIEEVIQLTG 118
Query: 126 VGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILELAKS 185
+ + KI +LS G RQRV A+AL+ +P++LILDEPT+ LDP ME I + K
Sbjct: 119 LTPESHKKISQLSKGYRQRVGLANALLHNPDVLILDEPTTGLDPNQLMEIRNVIKNIGKD 178
Query: 186 GKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDL 223
KT+F+S+HI+ E+E +C+ V +I GQ++ K+ L
Sbjct: 179 -KTIFLSTHIMQEVEAICDRVIIIDKGQIVADNKLDHL 215
>pir||T36062 probable ABC-type transport system ATP-binding protein -
Streptomyces coelicolor >gi|3928732|emb|CAA22228.1|
(AL034355) putative ABC transporter ATP-binding protein
[Streptomyces coelicolor A3(2)]
Length = 320
Score = 150 bits (374), Expect = 3e-35
Identities = 84/235 (35%), Positives = 134/235 (56%), Gaps = 8/235 (3%)
Query: 5 IIETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIKI 64
+I T+ L+K F + + L++ V G V G +G NGAGK+T IK+L G T G ++
Sbjct: 1 MIATESLSKRFPRVTALDRLSVDVGPG-VTGLVGANGAGKSTLIKILLGLSPATEGRAEV 59
Query: 65 IGMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMAYT 124
+G+++ + I VGYMPE D++ EF+V+M R+ GLP A + + + +
Sbjct: 60 LGLDVATKGADIRERVGYMPEHDCLPPDVSATEFVVHMARMSGLPPTAARERTADTLRHV 119
Query: 125 GVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILEL-A 183
G+ + I S+G +QRV A AL+ DP+L+ LDEPT+ LDP+GR E +G I +
Sbjct: 120 GLYEERYRPIGGYSTGMKQRVKLAQALVHDPQLVFLDEPTNGLDPVGRDEMLGLIRRIHT 179
Query: 184 KSGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAK------IESTDYD 232
G +V ++SH++ E+ER C++V ++ G+L+ D + IE TD D
Sbjct: 180 DFGISVLVTSHLLGELERTCDHVVVVDGGKLLRSSSTTDFTQTTTTLAIEVTDTD 234
>gb|AAK41504.1| ABC transporter, ATP binding protein [Sulfolobus solfataricus]
Length = 286
Score = 149 bits (372), Expect = 5e-35
Identities = 94/243 (38%), Positives = 145/243 (58%), Gaps = 9/243 (3%)
Query: 6 IETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIKII 65
IE ++L K F + V+ ++ K+ G++ GF+GPNGAGKTTTIK+L+G L+ G +K+
Sbjct: 3 IEVEDLRKKFAGKEVLKGVSFKLRSGSITGFIGPNGAGKTTTIKILSGLLRKDGGFVKVF 62
Query: 66 GMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMAYTG 125
G E P + K+M + + + + T+ E+L+ +G + G K + +N E T
Sbjct: 63 G-EDPWDNPKVMERISVIFTNLIHPQENTVGEYLMDLGNVYG-KKREIINYLIEEFKLTP 120
Query: 126 VGRLAFNK-IEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILEL-A 183
NK + +LSSG QRV +AL+ D EL+I DEPT+NLDP R+EF + EL
Sbjct: 121 ----HLNKRLYQLSSGLAQRVQLVAALIKDVELIIADEPTANLDPSFRIEFYEVVKELNR 176
Query: 184 KSGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKV-RDLAKIESTDYDVVVSDNEKLL 242
K+G T FISSHI+SE+E++ V I DG++ G++ + L+ E + V+V D ++ L
Sbjct: 177 KNGVTFFISSHILSELEKVITDVIFINDGRITYSGRMNKALSDTEEEEIYVMVDDTDRAL 236
Query: 243 KFL 245
K L
Sbjct: 237 KLL 239
>dbj|BAB08166.1| (AB030831) SrtF [Streptococcus pyogenes]
Length = 229
Score = 148 bits (371), Expect = 6e-35
Identities = 78/212 (36%), Positives = 134/212 (62%), Gaps = 9/212 (4%)
Query: 5 IIETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIKI 64
+++ + L K +GKR ++ N+N+ +PKG VY +GPNGAGK+T +K+LTG + T G I
Sbjct: 1 MLKIQNLKKSYGKRTILNNVNMNIPKGKVYALIGPNGAGKSTIMKILTGLVSKTSGSIIF 60
Query: 65 IGMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMAYT 124
G E R + +R +G + E P Y +++ ++ + + +LG+ + + L+
Sbjct: 61 EGREWSR---RDLRKIGSIIEEPPLYKNLSAYDNMKVVTTMLGVSESTIL----PLLNKV 113
Query: 125 GVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILELAK 184
G+G + +++ S G +QR+ A +L+ P+LLILDEPT+ LDP+G E + +I+E K
Sbjct: 114 GLGNIDKRPVKQFSLGMKQRLGIAISLINSPKLLILDEPTNGLDPIGIQE-LREIIESFK 172
Query: 185 S-GKTVFISSHIVSEIERMCNYVGLIKDGQLI 215
S G T+ ISSHI+SE+E + +++G I +G++I
Sbjct: 173 SEGMTIMISSHILSEVEHLADFIGFIYEGKII 204
>gb|AAG19009.1| (AE005000) daunorubicin resistance ABC transporter ATP-binding
protein; Trp3 [Halobacterium sp. NRC-1]
Length = 252
Score = 148 bits (370), Expect = 8e-35
Identities = 79/223 (35%), Positives = 128/223 (56%), Gaps = 1/223 (0%)
Query: 1 MPTYIIETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYG 60
M I LTK +G V +L+L VP G+VYGFLGPNGAGKTTT+++LT PT G
Sbjct: 1 MTDLAIRADGLTKRYGDEAAVDDLDLAVPAGSVYGFLGPNGAGKTTTMRLLTSLTDPTAG 60
Query: 61 EIKIIGMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQAREL 120
++ G+ + +R + +GY+P P +D++T +E L ++ RL GL +A + L
Sbjct: 61 TAEVAGVPVT-DRAALTPRIGYLPADPPVFDELTGWEQLRHVARLHGLDDGEADTRIESL 119
Query: 121 MAYTGVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKIL 180
+ + A +IE S+G ++V +A++ DP++L LDEPTS LDP +
Sbjct: 120 LERFDLLADADRRIESYSTGMTKKVGVVAAMLHDPDVLFLDEPTSGLDPRAARTVRDTVA 179
Query: 181 ELAKSGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDL 223
+L+ TV +S+H++ ++ + + +G+I DG L+ G +L
Sbjct: 180 DLSAGDATVLLSTHVLPVVDELADTIGVIDDGVLVADGDPENL 222
>gb|AAK41395.1| ABC transporter, ATP binding protein [Sulfolobus solfataricus]
Length = 275
Score = 147 bits (367), Expect = 2e-34
Identities = 80/240 (33%), Positives = 137/240 (56%), Gaps = 3/240 (1%)
Query: 4 YIIETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIK 63
Y+IE + K +GK ++ ++V +G + LGPNGAGKTT +K + G L PT GEI+
Sbjct: 2 YVIEVNNVWKAYGKIIANEDITMRVKEGEIVALLGPNGAGKTTLVKQIYGELTPTKGEIR 61
Query: 64 IIGMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMAY 123
++G + VK + +G +P+ Y D+T+++ + YMGRL G KD+ + EL+
Sbjct: 62 VLGKKPTDRHVK--KFLGVIPQECEPYGDLTVWDNIYYMGRLKGASKDEIKKRGEELLER 119
Query: 124 TGVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILELA 183
+ +LS G ++R L A AL+ +P+LLILDEPT+ LDP R E +L +
Sbjct: 120 LDLRSKRNTLARDLSGGLKRRTLIAMALINNPKLLILDEPTTGLDPEARREVWEILLNMR 179
Query: 184 KSGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAKIESTDYDVVVSDNEKLLK 243
K G+++ +++H + E ER+ + + + ++I +G + + + Y+V+ N K+ K
Sbjct: 180 KEGQSMLLTTHYLDEAERLADKIYFL-SRKIIVEGTPTQIKEKFADWYEVIDYTNGKVYK 238
>pir||C69819 ABC transporter (ATP-binding protein) homolog yhaQ - Bacillus
subtilis >gi|2226131|emb|CAA74424.1| (Y14078)
Hypothetical protein [Bacillus subtilis]
>gi|2633325|emb|CAB12829.1| (Z99109) similar to ABC
transporter (ATP-binding protein) [Bacillus subtilis]
Length = 298
Score = 147 bits (367), Expect = 2e-34
Identities = 88/269 (32%), Positives = 146/269 (53%), Gaps = 8/269 (2%)
Query: 11 LTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIKIIGMEMP 70
+TK FG V L+L +P+ ++G LG NGAGKTTT +M+ G L T G I G +
Sbjct: 7 VTKTFGDYKAVDGLDLDIPEQQMFGLLGANGAGKTTTFRMILGLLSITEGSISWKGRPV- 65
Query: 71 RERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMAYTGVGRLA 130
I +GY+PE Y M + + LVY+ RL G+ K +AV + + +
Sbjct: 66 --NYHISNKIGYLPEERGLYPKMKVRDQLVYLARLKGMEKREAVKELGTWLERFNITDYE 123
Query: 131 FNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILELAKSGKTVF 190
K+EEL+ G +Q++ F SA++ PELLILDEP S LDP+ ++ L SG ++
Sbjct: 124 NKKVEELAKGNQQKIQFISAVLHKPELLILDEPFSGLDPVNVELLKEAVISLKNSGVSIL 183
Query: 191 ISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAKIESTDYDVVVSDNEKLLKFLRDKIY 250
SSH + +E +C + +++ G+ + QGK++++ + + SD++ L+FL+
Sbjct: 184 FSSHRMEHVEELCENLCILQKGKPVVQGKLKEIKRSFGKKNVTIHSDDD--LRFLQSHEG 241
Query: 251 VREVWEE--EGIVRVKLDERFSEKFFLEL 277
+ + W+E +G+ +E S++ F L
Sbjct: 242 ILQ-WKETADGVKLQIANEDISQEIFAML 269
>sp|Q58429|YA23_METJA HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PROTEIN MJ1023
>gi|2127730|pir||F64427 ABC transporter ATP-binding
protein - Methanococcus jannaschii
>gi|1499865|gb|AAB99027.1| (U67545) ABC transporter
ATP-binding protein [Methanococcus jannaschii]
Length = 262
Score = 146 bits (366), Expect = 2e-34
Identities = 82/260 (31%), Positives = 146/260 (55%), Gaps = 25/260 (9%)
Query: 6 IETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIKII 65
I+ + LTK+FG + V+ ++ +V +G ++G LG NGAGKTTT+++L G ++ G +++
Sbjct: 5 IKVENLTKYFGDKKVLDEISFEVYEGEIFGLLGHNGAGKTTTLRILAGIIEEYTGYVEVN 64
Query: 66 GMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMAYTG 125
G +GY+PE Y D + + L + G L G+ K++ +
Sbjct: 65 G------------KIGYLPEERGLYRDEKVVDVLKFFGELAGMKKEEIAKSIDYWLNKLK 112
Query: 126 VGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILELAKS 185
+ ++KI+ELS G +Q+V F +++ +P+++ILDEP S LD + I EL +
Sbjct: 113 ISNYKYSKIKELSKGNQQKVQFIVSVIHNPDIVILDEPFSGLDVVNVRLLRDIIFELKEE 172
Query: 186 GKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLA-KIESTDYDVVVSDNEKLLKF 244
GKT+ +S+H + +IER+C+ V ++K G+ + GK+ D+ K+ +Y DN KL+K
Sbjct: 173 GKTIILSTHQLEKIERLCDRVLILKKGKAVHYGKIEDICRKMAYIEY----LDNGKLIK- 227
Query: 245 LRDKIYVREVWEEEGIVRVK 264
+E+ EE ++ +K
Sbjct: 228 -------KEIPYEEAVLILK 240
>pir||S74048 probable daunorubicin resistance protein - Sulfolobus solfataricus
>gi|1707742|emb|CAA69462.1| (Y08256) daunorubicin
resistance ATP-binding protein DrrA [Sulfolobus
solfataricus]
Length = 339
Score = 146 bits (366), Expect = 2e-34
Identities = 82/242 (33%), Positives = 140/242 (56%), Gaps = 1/242 (0%)
Query: 1 MPTYIIETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYG 60
M I+ LTK FGK V ++N +V +G ++GFLGPNGAGK+TTIKMLT LKP+ G
Sbjct: 7 MRNVAIKAINLTKRFGKFVAVDHINFEVYEGEIFGFLGPNGAGKSTTIKMLTTVLKPSEG 66
Query: 61 EIKIIGMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQAREL 120
+ G ++ ++ + +++G +P+ A +D+T +E ++ M L G+PK A +A+EL
Sbjct: 67 TATVSGYDVIKQPALVRQSIGVVPQEYTADEDLTGWENMMMMAGLYGIPKRIAEERAKEL 126
Query: 121 MAYTGVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKIL 180
+ + A K+E S G R+R+ A +L+ P +L LDEPT LD R I+
Sbjct: 127 LEMVELTYAAKRKVETYSGGMRRRLEIAMSLISRPRILFLDEPTLGLDAQTRAAIWQYIM 186
Query: 181 ELAKSGK-TVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAKIESTDYDVVVSDNE 239
+L + K T+F+++H + E + + + +I G+++ G ++L + D + + N+
Sbjct: 187 KLKEEYKMTIFVTTHYLEEADMYGDRIAIIDKGKILAIGSPKELKEKVGGDVVSLQTSND 246
Query: 240 KL 241
+L
Sbjct: 247 EL 248
>gb|AAK42315.1| ABC transporter, ATP binding protein. [Sulfolobus solfataricus]
Length = 339
Score = 146 bits (366), Expect = 2e-34
Identities = 82/242 (33%), Positives = 140/242 (56%), Gaps = 1/242 (0%)
Query: 1 MPTYIIETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYG 60
M I+ LTK FGK V ++N +V +G ++GFLGPNGAGK+TTIKMLT LKP+ G
Sbjct: 7 MRNVAIKAINLTKRFGKFVAVDHINFEVYEGEIFGFLGPNGAGKSTTIKMLTTVLKPSEG 66
Query: 61 EIKIIGMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQAREL 120
+ G ++ ++ + +++G +P+ A +D+T +E ++ M L G+PK A +A+EL
Sbjct: 67 TATVSGYDVIKQPALVRQSIGVVPQEYTADEDLTGWENMMMMAGLYGIPKRIAEERAKEL 126
Query: 121 MAYTGVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKIL 180
+ + A K+E S G R+R+ A +L+ P +L LDEPT LD R I+
Sbjct: 127 LEMVELTYAAKRKVETYSGGMRRRLEIAMSLISRPRILFLDEPTLGLDAQTRAAIWQYIM 186
Query: 181 ELAKSGK-TVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAKIESTDYDVVVSDNE 239
+L + K T+F+++H + E + + + +I G+++ G ++L + D + + N+
Sbjct: 187 KLKEEYKMTIFVTTHYLEEADMYGDRIAIIDKGKILAIGSPKELKEKVGGDVVSLQTSND 246
Query: 240 KL 241
+L
Sbjct: 247 EL 248
>emb|CAB95908.1| (AL359988) putative ABC transport system ATP-binding protein
[Streptomyces coelicolor A3(2)]
Length = 263
Score = 146 bits (365), Expect = 3e-34
Identities = 71/218 (32%), Positives = 129/218 (58%)
Query: 6 IETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIKII 65
+ + L K FG++ V ++L++P G G +GPNGAGKTTT+ M+TG L+P G ++++
Sbjct: 12 VRVQGLWKRFGQQVAVGGVDLELPAGKFIGLVGPNGAGKTTTLSMVTGLLRPDQGTVEVV 71
Query: 66 GMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMAYTG 125
G ++ R+ V++ +G +PE ++ ++ E L Y GRL GLP D+ +A +L+
Sbjct: 72 GHDVWRDPVEVKARIGVLPEGLRLFERLSGRELLGYTGRLRGLPGDEVDKRATQLLDVLD 131
Query: 126 VGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILELAKS 185
+ + + S+G R+++ A+AL+ +PE+L LDEP +DP+ G + S
Sbjct: 132 LAGAQHKLVVDYSTGMRKKIGLAAALLHNPEVLFLDEPFEGVDPVSAQTIRGVLERYTAS 191
Query: 186 GKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDL 223
G TV SSH++ +E +C++V ++ G++ G + ++
Sbjct: 192 GATVVFSSHVMELVESLCDWVAVMAAGRIRATGTLAEV 229
>gb|AAK40417.1| ABC transporter, ATP binding protein [Sulfolobus solfataricus]
Length = 246
Score = 146 bits (364), Expect = 4e-34
Identities = 85/248 (34%), Positives = 140/248 (56%), Gaps = 8/248 (3%)
Query: 1 MPTYIIETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYG 60
M I+E K+L K + + V+ ++ V KG ++ LGPNGAGKTTT+K+L+ LKPT G
Sbjct: 1 MTNVIVEVKDLYKEYKDKEVLRGISFTVYKGEIFSLLGPNGAGKTTTVKILSCVLKPTRG 60
Query: 61 EIKIIGMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQAREL 120
E+K+IG ++P E KI +G MP+ + D+T+ E + Y +L + Q EL
Sbjct: 61 EVKVIGYKVPNECGKIRERIGVMPQDYQGFLDLTVRENIEYFVKLY----NGKETQVDEL 116
Query: 121 MAYTGVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKIL 180
++ + ++ K+ LS G +RV ASA G E+L LDEPT LDP R F I
Sbjct: 117 ISLLDLEKVKNQKLRYLSGGYVRRVGIASAFAGSQEILFLDEPTVGLDPKARRGFWEIIK 176
Query: 181 ELAKSGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRD-LAKIESTDYDVVVSDNE 239
+ G T+F+++H + E +++ + V ++ G+LI+ + +A+ ++T+ + +
Sbjct: 177 MMKNKGVTIFLTTHYLDEAQKLSDRVAILYGGKLIKVSTADEIMAEFKATNLEDAYLE-- 234
Query: 240 KLLKFLRD 247
L+K L D
Sbjct: 235 -LIKSLED 241
>pir||S75436 hypothetical protein c05019 - Sulfolobus solfataricus
>gi|1707842|emb|CAA69520.1| (Y08257) putative ABC
transporter [Sulfolobus solfataricus]
Length = 246
Score = 146 bits (364), Expect = 4e-34
Identities = 85/248 (34%), Positives = 140/248 (56%), Gaps = 8/248 (3%)
Query: 1 MPTYIIETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYG 60
M I+E K+L K + + V+ ++ V KG ++ LGPNGAGKTTT+K+L+ LKPT G
Sbjct: 1 MTNVIVEVKDLYKEYKDKEVLRGISFTVYKGEIFSLLGPNGAGKTTTVKILSCVLKPTRG 60
Query: 61 EIKIIGMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQAREL 120
E+K+IG ++P E KI +G MP+ + D+T+ E + Y +L + Q EL
Sbjct: 61 EVKVIGYKVPNECGKIRERIGVMPQDYQGFLDLTVRENIEYFVKLY----NGKETQVDEL 116
Query: 121 MAYTGVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKIL 180
++ + ++ K+ LS G +RV ASA G E+L LDEPT LDP R F I
Sbjct: 117 ISLLDLEKVKNQKLRYLSGGYVRRVGIASAFAGSQEILFLDEPTVGLDPKARRGFWEIIK 176
Query: 181 ELAKSGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRD-LAKIESTDYDVVVSDNE 239
+ G T+F+++H + E +++ + V ++ G+LI+ + +A+ ++T+ + +
Sbjct: 177 MMKNKGVTIFLTTHYLDEAQKLSDRVAILYGGKLIKVSTADEIMAEFKATNLEDAYLE-- 234
Query: 240 KLLKFLRD 247
L+K L D
Sbjct: 235 -LIKSLED 241
>pir||C69049 ABC transporter (ATP-binding protein) - Methanobacterium
thermoautotrophicum (strain Delta H)
>gi|2622479|gb|AAB85847.1| (AE000900) ABC transporter
(ATP-binding protein) [Methanobacterium
thermoautotrophicum]
Length = 319
Score = 145 bits (362), Expect = 7e-34
Identities = 73/219 (33%), Positives = 123/219 (55%), Gaps = 1/219 (0%)
Query: 5 IIETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIKI 64
+IE + ++K FG+ + NL+ V +G + G +G NGAGKTT I+++ G L P G +++
Sbjct: 18 MIEVESVSKSFGRIRALDNLSFSVAEGELMGIIGHNGAGKTTAIRIIAGILHPDSGTVRV 77
Query: 65 IGMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMAYT 124
G ++ + + + +GY+PE P Y+ + L Y G L G+P+D ++ EL+
Sbjct: 78 GGHDVTEDPLSVKSMIGYLPEEPNLYERFRAGDLLRYFGELYGVPRDVLDDRIAELLELV 137
Query: 125 GVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILELAK 184
G+ A + I S G RQR+ A AL+ DP ++I DEPT LDP I + + K
Sbjct: 138 GMTDRAMDPINTFSKGLRQRIGIARALIHDPPIIIFDEPTMGLDPATAFS-IREFIRDLK 196
Query: 185 SGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDL 223
KT+ + +H + E E +C+ V +I G++++ G +L
Sbjct: 197 GSKTMILCTHYMEEAEYLCDRVAIINQGRILDIGTPDEL 235
>pir||A83142 probable ATP-binding component of ABC transporter PA4037 [imported]
- Pseudomonas aeruginosa (strain PAO1)
>gi|9950232|gb|AAG07424.1|AE004820_9 (AE004820) probable
ATP-binding component of ABC transporter [Pseudomonas
aeruginosa]
Length = 308
Score = 145 bits (361), Expect = 9e-34
Identities = 80/214 (37%), Positives = 129/214 (59%), Gaps = 7/214 (3%)
Query: 5 IIETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIKI 64
+I+ L+K F R VV +L+ ++ +G + G LGPNGAGK+TT+KML+G L P+ G ++I
Sbjct: 1 MIDIDRLSKRFSGRTVVNDLSFRIDRGEIVGLLGPNGAGKSTTLKMLSGFLAPSAGSVRI 60
Query: 65 IGMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRL---LGLPKDKAVNQARELM 121
G +M + + + +GY+PE +Y +MT+ FL ++ + G K + ++ A + M
Sbjct: 61 FGFDMQDKARQAQKLIGYLPENAPSYGEMTVEGFLAFVASIRDYSGREKRRRIDSAMDCM 120
Query: 122 AYTGVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILE 181
R + IE LS G ++RV A A++ DPELL+LDEPT LDP + + +
Sbjct: 121 ELRDERR---SIIETLSKGFKRRVALAQAILHDPELLLLDEPTDGLDPNQKHQVRQLVKN 177
Query: 182 LAKSGKTVFISSHIVSEIERMCNYVGLIKDGQLI 215
L++S K V IS+HI+ E+ MC+ +I G+L+
Sbjct: 178 LSES-KIVVISTHILEEVSFMCSRALVINGGRLL 210
>pir||S76626 ABC-type transport protein sll0489 - Synechocystis sp. (strain PCC
6803) >gi|1001733|dbj|BAA10570.1| (D64004) ABC
transporter [Synechocystis sp.]
Length = 342
Score = 145 bits (361), Expect = 9e-34
Identities = 78/214 (36%), Positives = 127/214 (58%), Gaps = 7/214 (3%)
Query: 5 IIETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIKI 64
+IE + L+K +G + N++ V KG + GFLGPNGAGKTTT+++L G + T G +++
Sbjct: 1 MIEVEHLSKVYGSTTAIQNVDFSVQKGEILGFLGPNGAGKTTTMRILAGYIPATTGTVRV 60
Query: 65 IGMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGL-PKDK--AVNQARELM 121
G ++ + + + + +GY+PE P Y DMT+ FL ++ + G+ P D+ V A E
Sbjct: 61 AGFDVHEQSLAVRKRIGYLPENPPLYGDMTVASFLNFVASIKGVKPGDRRQRVIWAMERC 120
Query: 122 AYTGVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILE 181
T ++ I +LS G +QRV A A++ DP ++ILDEPT LDP +E I
Sbjct: 121 QLTEKRKVL---IRKLSKGFKQRVGIAQAIVHDPAVIILDEPTVGLDPKQIIEVRNLIKS 177
Query: 182 LAKSGKTVFISSHIVSEIERMCNYVGLIKDGQLI 215
LA+ T+ +S+HI+ E+ C+ V +I G+++
Sbjct: 178 LAED-HTIILSTHILPEVSMTCDRVTIINQGRVV 210
>pir||D72492 probable ABC transporter ATP-binding protein APE2579 - Aeropyrum
pernix (strain K1) >gi|5106285|dbj|BAA81596.1|
(AP000064) 333aa long hypothetical ABC transporter
ATP-binding protein [Aeropyrum pernix]
Length = 333
Score = 144 bits (360), Expect = 1e-33
Identities = 85/266 (31%), Positives = 149/266 (55%), Gaps = 5/266 (1%)
Query: 5 IIETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIKI 64
++ +EL K +G V ++ ++ +G ++ LGPNGAGKTTTIKML+ L+PT GE I
Sbjct: 9 MVVAEELVKDYGGFRAVDGVSFRIARGELFSLLGPNGAGKTTTIKMLSTLLRPTSGEAWI 68
Query: 65 IGMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMAYT 124
G + RE + R +G +P+ A D+M+ ++ + RL GLP +A + RE++ Y
Sbjct: 69 AGYSIVREPGNVRRVIGLVPQDLTADDEMSGWDNVYIQARLYGLPSSEARERTREVLDYL 128
Query: 125 GVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILELAK 184
+ A ++ S G R+++ A +L+ P++L LDEPT LD R I +L +
Sbjct: 129 DLMEAAHRRVATYSGGMRRKLEIAMSLVHSPKVLFLDEPTLGLDVHSRRSLWRYIEDLKR 188
Query: 185 SGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDL-AKIESTDYDVVVSD---NEK 240
S T+ +++H + E E + + V +I G+++ +G +L A+++ + + D E
Sbjct: 189 SAVTILLTTHYMEEAEMLSDRVAIIDRGRIVAEGTPEELKARVKGETVYIELKDPEYTEP 248
Query: 241 LLKFLRDKIYVREVWEEEGIVRVKLD 266
L+ L++K+ + E EG V V++D
Sbjct: 249 LVLALKEKLGL-EPSVVEGKVAVRVD 273
>gb|AAC44357.1| (U43537) ATP-binding protein involved in mithramycin resistance
[Streptomyces argillaceus]
Length = 320
Score = 144 bits (360), Expect = 1e-33
Identities = 103/309 (33%), Positives = 160/309 (51%), Gaps = 15/309 (4%)
Query: 5 IIETKELTKFF----GKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYG 60
+I+ K L K F G V ++ V G + GFLGPNGAGKTTT++MLT L P+ G
Sbjct: 1 MIQAKGLAKTFTTKQGPVEAVAGVDFTVHTGEIVGFLGPNGAGKTTTMRMLTTLLPPSSG 60
Query: 61 EIKIIGMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQAREL 120
I G ++ E K+ ++GY+ + A + LV GRL G+ + +A +A E+
Sbjct: 61 TAVIAGRDLLHEPAKVRTHIGYVSQAGGAKPSSPVRRDLVLQGRLYGMSRSEAEARADEV 120
Query: 121 MAYTGVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKIL 180
+ G+ LA I+ LS Q +RV A LM PELL LDEPT+NLDP R + I
Sbjct: 121 ITQLGLEELADRIIQTLSGCQARRVDMALGLMHQPELLFLDEPTANLDPESRNDVWEHIR 180
Query: 181 ELA-KSGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDL-AKIESTDYDVVVSDN 238
L + G TVF+++H + E + +C+ V +I G++I + R L A I ++ V+D+
Sbjct: 181 RLRDERGTTVFLTTHYLDEADSLCDRVLIIDKGRIIAEDSPRSLKAAISHDTIEIEVADD 240
Query: 239 ----EKLLKFLRDKIYVREVWEEEGIVRVKLDERFSEKFFLELPAFLASEKLAIKLFKPH 294
+LL RD V EV ++ + R +E+ +L L S ++ ++ +
Sbjct: 241 TARATELLAAHRD---VHEVSVNGTVLSISC--RDAERLLADLLRTLESARIRVESLRVL 295
Query: 295 TSPLERILM 303
L+ + M
Sbjct: 296 KPTLDDVFM 304
>pir||B71030 probable ATP-binding transport protein - Pyrococcus horikoshii
>gi|3257959|dbj|BAA30642.1| (AP000006) 226aa long
hypothetical ATP-binding transport protein [Pyrococcus
horikoshii]
Length = 226
Score = 143 bits (357), Expect = 3e-33
Identities = 74/200 (37%), Positives = 117/200 (58%)
Query: 24 LNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIKIIGMEMPRERVKIMRNVGYM 83
+ + +G ++G +GPNGAGK+TT+K+L L+PT G+ ++ G ++ +E ++ + + Y+
Sbjct: 7 ITFSIEEGEIFGLIGPNGAGKSTTLKILATLLRPTGGKAEVFGFDVVKEADEVRKLISYL 66
Query: 84 PERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMAYTGVGRLAFNKIEELSSGQRQ 143
PE AY +T E+L +M +L KA + + +G+G +KI S G +
Sbjct: 67 PEEAGAYKRLTGLEYLKFMAKLYAKDSRKAEKMLKLGIELSGLGDRLRDKISTYSKGMVR 126
Query: 144 RVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILELAKSGKTVFISSHIVSEIERMC 203
R+L A ALM P+L ILDEPTS LD + E I E +K G T ISSH + E+E +C
Sbjct: 127 RLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRIIREFSKEGVTFLISSHNMLEVEYLC 186
Query: 204 NYVGLIKDGQLIEQGKVRDL 223
+ V LI G+++E G +L
Sbjct: 187 DRVALIHKGKIVEVGSPHEL 206
>pir||T36505 probable ABC-type transport system ATP-binding component -
Streptomyces coelicolor >gi|5457259|emb|CAB46947.1|
(AL096822) putative ABC-transporter ATP-binding
component [Streptomyces coelicolor A3(2)]
Length = 342
Score = 143 bits (357), Expect = 3e-33
Identities = 77/218 (35%), Positives = 124/218 (56%)
Query: 6 IETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIKII 65
IET L K FG+ V ++L VP G VYG LGPNGAGKTTT+KML L+P G ++
Sbjct: 10 IETAGLVKTFGETRAVDGVDLAVPAGTVYGVLGPNGAGKTTTVKMLATLLRPDGGHARVF 69
Query: 66 GMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMAYTG 125
G ++ E ++ V + +D+T E LV +GRLLG K A + +L+A G
Sbjct: 70 GHDVVHEADEVRGRVSLTGQYASVDEDLTGTENLVLLGRLLGHGKAAARERGDQLLAAFG 129
Query: 126 VGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILELAKS 185
+ A +++ S G R+R+ A++++ P+LL LDEPT+ LDP R + + +
Sbjct: 130 LTDAAAKQVKHYSGGMRRRIDIAASILNTPDLLFLDEPTTGLDPRSRNQVWDIVRAVVAQ 189
Query: 186 GKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDL 223
G TV +++ + E +++ + + +I G++I +G +L
Sbjct: 190 GTTVLLTTQYLDEADQLASRIAVIDKGRVIAEGTKGEL 227
>gi|11499468 daunorubicin resistance ATP-binding protein (drrA) [Archaeoglobus
fulgidus] >gi|7445660|pir||C69485 daunorubicin
resistance ATP-binding protein (drrA) homolog -
Archaeoglobus fulgidus >gi|2648659|gb|AAB89368.1|
(AE000972) daunorubicin resistance ATP-binding protein
(drrA) [Archaeoglobus fulgidus]
Length = 398
Score = 143 bits (356), Expect = 3e-33
Identities = 75/229 (32%), Positives = 130/229 (56%), Gaps = 3/229 (1%)
Query: 4 YIIETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIK 63
Y IE + L K FG V ++ KV +G ++ FLGPNGAGKTTT+ +LT LKPT G+
Sbjct: 78 YAIEVENLVKKFGDFEAVRGVSFKVKRGEIFAFLGPNGAGKTTTVHILTTLLKPTSGKAF 137
Query: 64 IIGMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMAY 123
+ G+++ RE ++ R +G + + P D+T +E ++ G + GL + + L+ +
Sbjct: 138 VAGLDVVREAREVRRRIGIVFQDPSVDRDLTAYENMLVHGGVYGLKGKELKEKIERLLKF 197
Query: 124 TGVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILELA 183
+ ++ S G ++R+ A +L+ PE+L LDEPT LDP R + +E
Sbjct: 198 VELWEFRDKLVKYFSGGMQRRLEIARSLLHHPEVLFLDEPTIGLDPQTRAH-VWSYIEAM 256
Query: 184 KSGK--TVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAKIESTD 230
K + T+F+++H + E E++ + V +I G++I +G V +L ++ +D
Sbjct: 257 KEEQDMTIFLTTHYMEEAEKLADRVAIIDHGRIIAEGSVEELKRLVGSD 305
>emb|CAC11868.1| (AL445065) ATP-binding protein related resistance protein
[Thermoplasma acidophilum]
Length = 319
Score = 143 bits (356), Expect = 3e-33
Identities = 74/219 (33%), Positives = 127/219 (57%)
Query: 5 IIETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIKI 64
++E + L+K + + V N ++K+ G+++ LG NGAGK+TT+K +TG L+P EI
Sbjct: 6 LLEVRNLSKIYPGGSGVRNASIKIRYGSIHALLGNNGAGKSTTMKCITGLLEPDSIEISF 65
Query: 65 IGMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMAYT 124
G P + +++GY+PE P T+ + +V GR++GL K +AV +A +++
Sbjct: 66 RGTTYPWNSKDLKKHIGYVPELPAFPKVFTVHDCIVSYGRMMGLGKAEAVGRAMPIVSIL 125
Query: 125 GVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILELAK 184
G+ ++ LS G Q++ AL+ DP+++I+DEPT+ LD E G I L
Sbjct: 126 GLEEHMKKRVSSLSRGMLQKLDIVIALLSDPDVIIMDEPTAGLDVSAVEELFGIIRSLRD 185
Query: 185 SGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDL 223
GK++ ISSH + +IE + + V ++ G +I G ++DL
Sbjct: 186 RGKSILISSHQLRDIETISDSVTVMDSGHVIFDGSIKDL 224
>emb|CAA75761.1| (Y15759) ORF1 [Streptomyces rochei]
Length = 363
Score = 141 bits (353), Expect = 8e-33
Identities = 74/218 (33%), Positives = 124/218 (55%)
Query: 6 IETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIKII 65
IET L K FG+ V ++L+VP G VYG LGPNGAGKTTT+K+L L+P GE ++
Sbjct: 7 IETTGLVKVFGENRAVDGVDLRVPAGTVYGLLGPNGAGKTTTVKVLATLLRPDGGEARVF 66
Query: 66 GMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMAYTG 125
G ++ + + V + +D+T E L+ + RLLG K A +A +L+ G
Sbjct: 67 GRDVLADADAVRGRVSLTGQYASVDEDLTGTENLLLLARLLGHSKPAARERAAQLLDAFG 126
Query: 126 VGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILELAKS 185
+ A +++ S G R+R+ A++++ P+LL LDEPT+ LDP R + + +
Sbjct: 127 LSEAAGRQVKSYSGGMRRRIDIAASILNTPDLLFLDEPTTGLDPRSRNQVWDIVRAVVAQ 186
Query: 186 GKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDL 223
G TV +++ + E +++ + + +I G++I +G +L
Sbjct: 187 GTTVLLTTQYLDEADQLASRIAVIDHGRVIAEGTKGEL 224
>pir||E72364 ABC transporter, ATP-binding protein - Thermotoga maritima (strain
MSB8) >gi|4981058|gb|AAD35629.1|AE001729_9 (AE001729)
ABC transporter, ATP-binding protein [Thermotoga
maritima]
Length = 244
Score = 141 bits (352), Expect = 1e-32
Identities = 67/218 (30%), Positives = 123/218 (55%)
Query: 6 IETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIKII 65
+ K+L K GK+ ++ ++ ++ +G ++G +GPNGAGKTTT+++++ +KP+ G + +
Sbjct: 4 VVVKDLRKRIGKKEILKGISFEIEEGEIFGLIGPNGAGKTTTLRIISTLIKPSSGIVTVF 63
Query: 66 GMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMAYTG 125
G + E ++ + + Y+PE AY +M E+L ++ + G
Sbjct: 64 GKNVVEEPHEVRKLISYLPEEAGAYRNMQGIEYLRFVAGFYASSSSEIEEMVERATEIAG 123
Query: 126 VGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILELAKS 185
+G +++ S G +++L A ALM +P L ILDEPTS LD L E + + ++
Sbjct: 124 LGEKIKDRVSTYSKGMVRKLLIARALMVNPRLAILDEPTSGLDVLNAREVRKILKQASQE 183
Query: 186 GKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDL 223
G T+ +SSH + E+E +C+ + LI +G ++E G V +L
Sbjct: 184 GLTILVSSHNMLEVEFLCDRIALIHNGTIVETGTVEEL 221
>pir||C83188 probable ATP-binding component of ABC transporter PA3672 [imported]
- Pseudomonas aeruginosa (strain PAO1)
>gi|9949834|gb|AAG07060.1|AE004786_12 (AE004786)
probable ATP-binding component of ABC transporter
[Pseudomonas aeruginosa]
Length = 307
Score = 141 bits (352), Expect = 1e-32
Identities = 90/240 (37%), Positives = 131/240 (54%), Gaps = 7/240 (2%)
Query: 5 IIETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIKI 64
+IET+ L K FG R V +L+ +V G V GFLGPNGAGK+TT+KMLTG L P G I
Sbjct: 1 MIETRNLGKRFGSRVAVDDLSFQVETGEVLGFLGPNGAGKSTTMKMLTGFLAPCAGTASI 60
Query: 65 IGMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRL---LGLPKDKAVNQARELM 121
G ++ ++ R +GY+PE Y +MT+ FL ++ + G K + V +A L+
Sbjct: 61 FGFDIRNRTLQAQRLIGYLPEGSPCYAEMTVQGFLDFIAEIRGYRGAGKRERVARALGLL 120
Query: 122 AYTGVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILE 181
V R IE LS G R+RV A A++ +P L+LDEPT LDP + + I
Sbjct: 121 ELDEVRR---QTIETLSKGFRRRVGLAQAILHEPRALVLDEPTDGLDPNQKHQVRELIRG 177
Query: 182 LAKSGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAKIESTDYDVVVSDNEKL 241
LA+ + V IS+HI+ E+ +C+ +I G+L+ +LA V + +E L
Sbjct: 178 LAQE-RIVIISTHILEEVSALCSRALVIGGGRLLADSTPLELASRSRYHQAVTLYSDEPL 236
>dbj|BAB04885.1| (AP001511) ABC transporter (ATP-binding protein) [Bacillus
halodurans]
Length = 299
Score = 141 bits (352), Expect = 1e-32
Identities = 74/216 (34%), Positives = 125/216 (57%), Gaps = 5/216 (2%)
Query: 11 LTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIKIIGMEMP 70
+TK FG V NL++ VPKG ++G LG NGAGKTTT +M+ G L+PT G I +
Sbjct: 8 VTKKFGTFTAVNNLHVSVPKGEMFGMLGANGAGKTTTFRMILGLLEPTEGTIHWREQPLT 67
Query: 71 RERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMAYTGVGRLA 130
+ +GY+PE Y +T+ + L Y+GRL G+ + + + V
Sbjct: 68 YNQTNC---IGYLPEERGLYPKLTVKDQLKYLGRLKGMKTQDIQKEMKMWLERFEVPEYE 124
Query: 131 FNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGK-ILELAKSGKTV 189
++E+LS G +Q++ F ++++ PELLILDEP S LDP+ +E + K +++L K G T+
Sbjct: 125 HKRVEQLSKGNQQKIQFIASVLHRPELLILDEPFSGLDPV-NVELLKKAVIDLKKEGTTI 183
Query: 190 FISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAK 225
SSH + +E +C ++ ++ G + +G ++++ +
Sbjct: 184 LFSSHRMEHVEELCQHLCILHRGSPVVEGNLKNIKR 219
>pir||E75108 daunorubicin resistance ATP-binding protein (drra-1) PAB1923 -
Pyrococcus abyssi (strain Orsay)
>gi|5458093|emb|CAB49582.1| (AJ248285) daunorubicin
resistance ATP-binding protein (drrA-1) [Pyrococcus
abyssi]
Length = 328
Score = 140 bits (350), Expect = 2e-32
Identities = 75/230 (32%), Positives = 130/230 (55%), Gaps = 5/230 (2%)
Query: 4 YIIETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIK 63
Y IE + L K +G V ++ KV KG ++ FLGPNGAGKTTT+ +LT LKPT G+
Sbjct: 2 YAIEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAI 61
Query: 64 IIGMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMAY 123
+ G ++ +E ++ + +G + + P ++T +E + G + GL + + EL+ +
Sbjct: 62 VAGHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKF 121
Query: 124 TGVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGR---MEFIGKIL 180
+ R ++ S G ++R+ A AL+ +PE+L LDEPT LDP R E+I +
Sbjct: 122 VELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMK 181
Query: 181 ELAKSGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAKIESTD 230
E + T+F+++H + E E++ + + +I G++I +G +L K+ D
Sbjct: 182 E--EHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVGND 229
>sp|P26946|YATR_BACFI HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PROTEIN
>gi|98114|pir||S15486 probable ABC-type transport
protein - Bacillus firmus >gi|39478|emb|CAA42056.1|
(X59424) ATP binding protein of transport ATPases
[Bacillus firmus]
Length = 267
Score = 140 bits (349), Expect = 2e-32
Identities = 78/242 (32%), Positives = 141/242 (58%), Gaps = 6/242 (2%)
Query: 37 LGPNGAGKTTTIKMLTGALKPTYGEIKIIGMEMPRERVKIMRNVGYMPERPLAYDDMTIF 96
LG NGAGKTTT +M+ G L+PT GE+ G ++ R + +GY+PE Y + +
Sbjct: 2 LGANGAGKTTTFRMMLGLLEPTEGEMTWKGEKIDYPRTNV---IGYLPEERGLYPKLKVR 58
Query: 97 EFLVYMGRLLGLPKDKAVNQARELMAYTGVGRLAFNKIEELSSGQRQRVLFASALMGDPE 156
+ L+Y+GRL G+ K + + R + V +IEELS G +Q++ F ++++ PE
Sbjct: 59 DQLIYLGRLKGMHKKDIIPEMRMWLERFKVTDYETKRIEELSKGNQQKIQFIASVIHRPE 118
Query: 157 LLILDEPTSNLDPLGRMEFIGKILELAKSGKTVFISSHIVSEIERMCNYVGLIKDGQLIE 216
LLILDEP S LDP+ +++L K G T+ SSH + +E +C ++ +++ G +
Sbjct: 119 LLILDEPFSGLDPVNAELLKEAVIDLKKKGTTIVFSSHRMDHVEELCQHLCILRHGTPVV 178
Query: 217 QGKVRDLAKIESTDYDVVVSDNEKLLKFLRDKIYVREVWEEEGIVRVKL-DERFSEKFFL 275
+G++R++ + S +V + E+ + L++ V++ +++G VR+++ DE ++ F
Sbjct: 179 KGELREIKR--SFRNKFIVIEGERSFETLKNLPGVKKFQQKQGGVRLQVEDEEVAKVIFA 236
Query: 276 EL 277
E+
Sbjct: 237 EV 238
>emb|CAC11986.1| (AL445065) ABC transporter cdd4-like protein ScnF related protein
[Thermoplasma acidophilum]
Length = 297
Score = 140 bits (349), Expect = 2e-32
Identities = 75/222 (33%), Positives = 125/222 (55%), Gaps = 1/222 (0%)
Query: 6 IETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIKII 65
I ++K +G + ++ V LGPNGAGKTT +K++T ++P+ G + I
Sbjct: 4 ISVSNVSKRYGDLMALNRVSFNVNGTGCLVLLGPNGAGKTTLMKIMTNIIRPSEGNVSIN 63
Query: 66 GMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMAYTG 125
G + K + VG + E+P Y +T +E L++ R+ G+ K+K +++ + + T
Sbjct: 64 GFNVRENPGKALETVGSLIEQPEFYPYITGYEALMFTCRIRGISKEKCISEVQRVSTLTH 123
Query: 126 VGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILELAKS 185
K +E S G +QRV A+AL+GDP ++ILDEPT LDP G ME I+++ K
Sbjct: 124 CRDYLNRKTKEYSRGMKQRVGLATALIGDPSIIILDEPTFGLDPNGMMEIRDIIMKMKKE 183
Query: 186 GKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAKIE 227
K + +S+H++SE E + +Y+G+I G+L+ G V +E
Sbjct: 184 -KLIVLSTHLISEAELLADYIGIIDHGRLMHFGPVEKQRYLE 224
>pir||S47705 hypothetical protein f648 - Escherichia coli
>gi|912462|gb|AAB18461.1| (U00039) No definition line
found [Escherichia coli]
Length = 648
Score = 139 bits (348), Expect = 3e-32
Identities = 78/221 (35%), Positives = 131/221 (58%), Gaps = 2/221 (0%)
Query: 6 IETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIKII 65
IE ++LT FG V ++N ++P+G ++GFLG NG GK+TT+KMLTG L + GE +
Sbjct: 14 IEARDLTMRFGSFVAVDHVNFRIPRGEIFGFLGSNGCGKSTTMKMLTGLLPASEGEAWLF 73
Query: 66 GMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMAYTG 125
G + + + R VGYM + Y+++T+ + L RL +P+ + + E+
Sbjct: 74 GQPVDPKDIDTRRRVGYMSQAFSLYNELTVRQNLELHARLFHIPEAEIPARVAEMSERFK 133
Query: 126 VGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILELAKS 185
+ + E L G RQR+ A A++ PE+LILDEPTS +DP+ R F +++L++
Sbjct: 134 LNDVEDILPESLPLGIRQRLSLAVAVIHRPEMLILDEPTSGVDPVARDMFWQLMVDLSRQ 193
Query: 186 GK-TVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAK 225
K T+FIS+H ++E ER C+ + L+ G+++ G ++L +
Sbjct: 194 DKVTIFISTHFMNEAER-CDRISLMHAGKVLASGTPQELVE 233
>emb|CAC11214.1| (AL445063) gliding motility protein (gldA) related protein
[Thermoplasma acidophilum]
Length = 260
Score = 139 bits (348), Expect = 3e-32
Identities = 74/253 (29%), Positives = 136/253 (53%), Gaps = 9/253 (3%)
Query: 6 IETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIKII 65
I+ ++ +G++ + + L +P+G +YG LGPNG+GKTT ++++ G LK T G +
Sbjct: 6 IKIDNVSMRYGEKLALDGVTLDIPEGTIYGILGPNGSGKTTLMRIILGLLKQTAGSAIVC 65
Query: 66 GMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMAYTG 125
G + R+++KI GY+PE P+ Y+ MT E ++ + + + + L+ G
Sbjct: 66 GYDSTRDQMKIKEISGYVPETPILYESMTPSELFSFIASIRRMDEGTFRRRVDALIDAFG 125
Query: 126 VGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILELAKS 185
+ I LS G RQ+V SA++ DP++LI+DE + LDP F + ++
Sbjct: 126 IAEYINEFIGSLSFGNRQKVAIISAILHDPKILIVDEGINGLDPRSAKLFKSILTDMRDH 185
Query: 186 GKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDL---AKIESTDYDVV------VS 236
GK + S+HI+ E +C++V ++ +G ++ G + DL A S + + +
Sbjct: 186 GKIIVFSTHILEIAESLCDHVAILYNGHIVANGTIADLRNEANAPSQNLEEIFLKLTNAD 245
Query: 237 DNEKLLKFLRDKI 249
D ++ ++LRD+I
Sbjct: 246 DIPEVARYLRDEI 258
>sp|P37624|YHIH_ECOLI HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PROTEIN YHIH
>gi|7430321|pir||A65146 probable ABC transporter yhiH -
Escherichia coli >gi|2367231|gb|AAC76511.1| (AE000424)
putative ATP-binding component of a transport system,
fragment 1 [Escherichia coli K12]
Length = 894
Score = 139 bits (348), Expect = 3e-32
Identities = 78/221 (35%), Positives = 131/221 (58%), Gaps = 2/221 (0%)
Query: 6 IETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIKII 65
IE ++LT FG V ++N ++P+G ++GFLG NG GK+TT+KMLTG L + GE +
Sbjct: 260 IEARDLTMRFGSFVAVDHVNFRIPRGEIFGFLGSNGCGKSTTMKMLTGLLPASEGEAWLF 319
Query: 66 GMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMAYTG 125
G + + + R VGYM + Y+++T+ + L RL +P+ + + E+
Sbjct: 320 GQPVDPKDIDTRRRVGYMSQAFSLYNELTVRQNLELHARLFHIPEAEIPARVAEMSERFK 379
Query: 126 VGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILELAKS 185
+ + E L G RQR+ A A++ PE+LILDEPTS +DP+ R F +++L++
Sbjct: 380 LNDVEDILPESLPLGIRQRLSLAVAVIHRPEMLILDEPTSGVDPVARDMFWQLMVDLSRQ 439
Query: 186 GK-TVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAK 225
K T+FIS+H ++E ER C+ + L+ G+++ G ++L +
Sbjct: 440 DKVTIFISTHFMNEAER-CDRISLMHAGKVLASGTPQELVE 479
Score = 108 bits (267), Expect = 9e-23
Identities = 61/219 (27%), Positives = 119/219 (53%), Gaps = 7/219 (3%)
Query: 11 LTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIKIIGMEM- 69
+++ +GK + N+ L +P + G +GP+G GK++ + +++GA G + ++G +M
Sbjct: 1 MSQHYGKTVALNNITLDIPARCMVGLIGPDGVGKSSLLSLISGARVIEQGNVMVLGGDMR 60
Query: 70 -PRERVKIMRNVGYMPER--PLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMAYTGV 126
P+ R + + +MP+ Y ++++E + + RL G K + + EL+ TG+
Sbjct: 61 DPKHRRDVCPRIAWMPQGLGKNLYHTLSVYENVDFFARLFGHDKAEREVRINELLTSTGL 120
Query: 127 GRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKI--LELAK 184
+LS G +Q++ AL+ DPELLILDEPT+ +DPL R +F I + +
Sbjct: 121 APFRDRPAGKLSGGMKQKLGLCCALIHDPELLILDEPTTGVDPLSRSQFWDLIDSIRQRQ 180
Query: 185 SGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDL 223
S +V +++ + E ER +++ + G+++ G +L
Sbjct: 181 SNMSVLVATAYMEEAERF-DWLVAMNAGEVLATGSAEEL 218
>pir||C72568 probable ATP-binding transport protein APE1829 - Aeropyrum pernix
(strain K1) >gi|5105519|dbj|BAA80832.1| (AP000062) 345aa
long hypothetical ATP-binding transport protein
[Aeropyrum pernix]
Length = 345
Score = 138 bits (345), Expect = 7e-32
Identities = 86/232 (37%), Positives = 134/232 (57%), Gaps = 12/232 (5%)
Query: 5 IIETKELTKFFG----KRNVVYNL---NLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKP 57
+IE + L K F +R VV L + V +G +Y FLGPNGAGKTTT+++L+ L P
Sbjct: 5 MIEARGLVKRFVSGRIRRRVVEALKGVSFSVYEGEIYSFLGPNGAGKTTTVRILSTLLDP 64
Query: 58 TYGEIKIIGMEMPRERVKIMRNVGYM--PERPLAYDDMTIFEFLVYMGRLLGLPKDKAVN 115
GE ++ G ++ +ER ++ + +G M ER Y +T E L Y GR+ G+P+ + +
Sbjct: 65 DGGEARVAGFDVVKERWEVRKRIGVMLSVERGF-YWKLTGRENLYYFGRIYGIPQGELKS 123
Query: 116 QARELMAYTGVGRL--AFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRM 173
+ +E++ G+ L A EE+S G + R+ A L+ DPE+LILDEPT LDP
Sbjct: 124 RIKEVLDLVGLTDLGGADKPFEEMSLGMKARLGLARVLLKDPEVLILDEPTLGLDPASAR 183
Query: 174 EFIGKILELAKSGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAK 225
G I LA G+T+FI++H + E E + + VG+I G++ +G +L +
Sbjct: 184 TIRGVIRSLASEGRTIFITTHNMVEAEMISDRVGIIIGGRIAMEGTPDELKR 235
>pir||E69771 ABC transporter (ATP-binding protein) homolog ydbJ - Bacillus
subtilis >gi|1881259|dbj|BAA19286.1| (AB001488) PROBABLE
TRANSPORT ATP BINDING PROTEIN. [Bacillus subtilis]
>gi|2632749|emb|CAB12256.1| (Z99106) similar to ABC
transporter (ATP-binding protein) [Bacillus subtilis]
Length = 308
Score = 138 bits (345), Expect = 7e-32
Identities = 95/317 (29%), Positives = 161/317 (49%), Gaps = 21/317 (6%)
Query: 5 IIETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIKI 64
I+ + L K G + ++ +++ V +G + G LGPNG+GKTT I+++ G LK G + I
Sbjct: 5 ILHIEGLDKKIGSKQILKQISMDVMEGEIIGLLGPNGSGKTTLIRIIVGLLKQNSGSVTI 64
Query: 65 IGMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMAYT 124
G + E K M VG + E P Y +T +E L + + K A + E++
Sbjct: 65 SGFQHDTEFEKAMEAVGAIVENPEFYPYLTGWENLKHFA---NMHKKIADERLDEVVERV 121
Query: 125 GVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILELAK 184
G+ +K++ S G RQR+ A A++ P+LLILDEPT+ LDP G +F I ELA+
Sbjct: 122 GLTSAIHDKVKTYSLGMRQRLGIAQAILHRPKLLILDEPTNGLDPAGMKDFRDHIKELAE 181
Query: 185 -SGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAKIESTDYD-----VVVSDN 238
G V ++H++ E+E +C+ V +I++G+++ ++ TD + V
Sbjct: 182 MEGTAVLFATHLLREVEDLCDRV------IIIQKGEIKAEVSLQGTDQTTEKAIIEVQPQ 235
Query: 239 EKLLKFLRDKIYVREVWEEEGIVRVKLDERFSEKFFLELPAFLASEKLAIKLFKPHTSPL 298
EK L +L Y E ++G + V++ +++ EL L + L + P+T L
Sbjct: 236 EKALNWLTGNQYQAE--SQDGTIVVEV----AKENIPELNRSLVGQDLNVFSITPYTQSL 289
Query: 299 ERILMKRFNMGWKNGEQ 315
E +K + GE+
Sbjct: 290 EDEFIKATTAHQEEGEE 306
>pir||T09008 cdd4-like protein ScnF - Streptococcus pyogenes
>gi|2502072|gb|AAB92604.1| (AF026542) ScnF
[Streptococcus pyogenes]
Length = 299
Score = 138 bits (344), Expect = 9e-32
Identities = 84/218 (38%), Positives = 129/218 (58%), Gaps = 8/218 (3%)
Query: 6 IETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIKII 65
IE ++L+K + V + V +G +YGFLGPNGAGKTTT+KM+ + PT GEI I
Sbjct: 5 IELRKLSKVYQDITTVDLEKITVREGEIYGFLGPNGAGKTTTMKMILSLVSPTLGEILIN 64
Query: 66 GMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMAYTG 125
G ++ +R +G M E P Y ++T +E L+ +++G + + +A G
Sbjct: 65 GEDIKGNHA-YLRVIGSMIEEPSYYPNLTGYENLLVFQKMVGFDE----SNIWPTLALVG 119
Query: 126 VGRLAFNK--IEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILELA 183
+ K ++ S G +QR+ A AL+ P++L+LDEPT+ LDP G E I++LA
Sbjct: 120 LAEENNRKKLVKAYSLGMKQRLALAFALVKKPKILLLDEPTNGLDPAGIHEIRELIVKLA 179
Query: 184 K-SGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKV 220
K G TVFISS I+SEIE + + VG+I G+L+ +G++
Sbjct: 180 KEKGLTVFISSQILSEIEHIADRVGIINHGRLVYEGEI 217
>emb|CAC11370.1| (AL445063) gliding motility protein related [Thermoplasma
acidophilum]
Length = 305
Score = 138 bits (344), Expect = 9e-32
Identities = 92/311 (29%), Positives = 163/311 (51%), Gaps = 16/311 (5%)
Query: 1 MPTYIIETKELTKFF-GKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTY 59
MP +IE + L + + G+ VV +++ V KG +YG LG NGAGKTTTI+ +T L Y
Sbjct: 1 MPDKVIEVEHLRQTYDGRTFVVDDVSFYVLKGEIYGLLGKNGAGKTTTIRTMTTILPVHY 60
Query: 60 GEIKIIGMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARE 119
G+++I+GM++ KI R +G + + ++D ++ L G L +P++ + E
Sbjct: 61 GKVRILGMDVSENAEKIRRRIGVVLQNE-SFDFASVERNLKVYGMLWDVPREVLKARIEE 119
Query: 120 LMAYTGVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKI 179
++ +G+L + ELS GQ++R+ A + D +LL LDEPT LDP+ R + I
Sbjct: 120 VLEVFDLGQLRKVRAMELSGGQKKRLQVAREFLHDMDLLFLDEPTVGLDPIMRRSVLNYI 179
Query: 180 LELAKSGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAKI--ESTDYDVVVS- 236
+ A+ G TV ++ I+ E + +C+ + ++ G+++ +G DL + VVVS
Sbjct: 180 RDKARKGLTVLYTTQIMEEADYLCDRIAIMNRGKIVAEGTSSDLKSKYGDLKTIHVVVSG 239
Query: 237 --DNEKL-LKFLRDKIYVREVWEEEGIVRVKLDERFSEKFFLELPAFLASEKLAIKLFKP 293
D E L KF D ++ E +++ + E +L +L ++ + I+
Sbjct: 240 EIDYEDLRAKFPEDVLFDNE--------EIRIVSKNVEDILPDLIIYLKTKGIRIERISV 291
Query: 294 HTSPLERILMK 304
S L+ + +K
Sbjct: 292 EESSLDDVFLK 302
>pir||T36523 probable ABC-type transport system ATP-binding protein -
Streptomyces coelicolor >gi|4753857|emb|CAB42020.1|
(AL049754) putative ABC transporter ATP-binding protein
[Streptomyces coelicolor A3(2)]
Length = 311
Score = 138 bits (343), Expect = 1e-31
Identities = 84/229 (36%), Positives = 127/229 (54%), Gaps = 9/229 (3%)
Query: 3 TYIIETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEI 62
T I L K FG+ + + L+L+V G V+GFLGPNGAGK+TTI++L G L+ G
Sbjct: 2 TKAISVSGLHKSFGRTHALDGLDLEVETGEVHGFLGPNGAGKSTTIRVLLGLLRADAGAA 61
Query: 63 KIIGMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGL--PKDKAVNQAREL 120
+++G + + V+ R + Y+P + +++ E + GRL G + +A R
Sbjct: 62 QVLGRDPWADAVEAHRRIAYVPGDVTLWRNLSGGEVIDLYGRLRGGLDTRRRAELVERFE 121
Query: 121 MAYTGVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKIL 180
+ T GR S G RQ+V +A D +LLILDEPTS LDPL F +
Sbjct: 122 LDPTKKGRT-------YSKGNRQKVALVAAFASDVDLLILDEPTSGLDPLMEEVFQRCVE 174
Query: 181 ELAKSGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAKIEST 229
E + G+TV +SSHI+SE+E +C+ V +I+ G+ +E G + DL + T
Sbjct: 175 EERERGRTVLLSSHILSEVEELCDRVSIIRKGRTVESGSLADLRHLTRT 223
>dbj|BAB04773.1| (AP001510) transposase (08)/ABC transporter (ATP-binding protein)
[Bacillus halodurans]
Length = 901
Score = 138 bits (343), Expect = 1e-31
Identities = 72/242 (29%), Positives = 136/242 (55%), Gaps = 1/242 (0%)
Query: 5 IIETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIKI 64
+IE +L+K + R VV +N+ + KG + G LGPNGAGK+TTI M++ ++PT G++ I
Sbjct: 592 MIEVIDLSKTYRNRQVVKGINMFIEKGEMVGLLGPNGAGKSTTISMISSLIQPTSGDVLI 651
Query: 65 IGMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMAYT 124
G + ++ I +G +P+ Y D+T E L + G++ GL ++ ++ +
Sbjct: 652 KGGSIHKQSKAIRSILGVVPQEIAVYHDLTARENLAFFGKIYGLKGEELKHRMESTLQLV 711
Query: 125 GVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILELAK 184
G+ +++ S G ++R+ A AL+ +PEL+I+DEPT +DP R + + L +
Sbjct: 712 GLEERQNDRVHTFSGGMKRRLNIAVALLHEPELIIMDEPTVGIDPQSRSHILETVKTLNQ 771
Query: 185 SGK-TVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAKIESTDYDVVVSDNEKLLK 243
+ TV +SH + E+E +C+ + ++ G++I G ++ I S++ + ++ +
Sbjct: 772 EREMTVIYTSHYMEEVEYLCDRLYIMDRGEVIASGTKDEVKGILSSNQSIKLTTEMYSPR 831
Query: 244 FL 245
FL
Sbjct: 832 FL 833
>pir||C71081 probable resistance ATP-binding protein - Pyrococcus horikoshii
>gi|3257326|dbj|BAA30009.1| (AP000004) 324aa long
hypothetical resistance ATP-binding protein [Pyrococcus
horikoshii]
Length = 324
Score = 137 bits (341), Expect = 2e-31
Identities = 73/228 (32%), Positives = 128/228 (56%), Gaps = 5/228 (2%)
Query: 6 IETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIKII 65
I + L K +G V ++ KV +G ++ FLGPNGAGKTTT+ MLT LKPT G +
Sbjct: 7 IIVENLVKKYGDFEAVRGISFKVRRGEIFAFLGPNGAGKTTTVHMLTTLLKPTSGRAIVA 66
Query: 66 GMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMAYTG 125
G ++ +E ++ + +G + + P ++T +E + GR+ GL + + EL+ +
Sbjct: 67 GHDVVKESREVRKKIGVVFQDPSVDRELTAWENMYIHGRIYGLKGQELKKKIEELLKFVE 126
Query: 126 VGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGR---MEFIGKILEL 182
+ +++ S G ++R+ A AL+ +PE+L LDEPT LDP R E+I + E
Sbjct: 127 LWEFKDRQVKYFSGGMQRRLEIARALIHEPEVLFLDEPTIGLDPQTRAHIWEYIKTMKE- 185
Query: 183 AKSGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAKIESTD 230
+ T+F+++H + E E++ + + +I G++I +G +L K+ D
Sbjct: 186 -EHDMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTAEELKKLVGND 232
>sp|P32010|DRRA_STRPE DAUNORUBICIN RESISTANCE ATP-BINDING PROTEIN DRRA
>gi|625935|pir||S27707 daunorubicin resistance protein -
Streptomyces peucetius >gi|153230|gb|AAA74717.1|
(M73758) daunorubicin resistance protein [Streptomyces
peucetius]
Length = 330
Score = 137 bits (341), Expect = 2e-31
Identities = 77/222 (34%), Positives = 122/222 (54%)
Query: 2 PTYIIETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGE 61
PT IET L K + V L+L VP G VYG LGPNGAGK+TTI+ML L+P G
Sbjct: 5 PTRAIETSGLVKVYNGTRAVDGLDLNVPAGLVYGILGPNGAGKSTTIRMLATLLRPDGGT 64
Query: 62 IKIIGMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELM 121
++ G ++ E + R + + + +T E LV MGRL G +A +A EL+
Sbjct: 65 ARVFGHDVTSEPDTVRRRISVTGQYASVDEGLTGTENLVMMGRLQGYSWARARERAAELI 124
Query: 122 AYTGVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILE 181
G+G ++ S G R+R+ A++++ P+LL LDEPT+ LDP R + +
Sbjct: 125 DGFGLGDARDRLLKTYSGGMRRRLDIAASIVVTPDLLFLDEPTTGLDPRSRNQVWDIVRA 184
Query: 182 LAKSGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDL 223
L +G TV +++ + E +++ + + +I G++I +G +L
Sbjct: 185 LVDAGTTVLLTTQYLDEADQLADRIAVIDHGRVIAEGTTGEL 226
>dbj|BAA83955.1| (AB024563) YFIL [Bacillus halodurans]
Length = 310
Score = 137 bits (341), Expect = 2e-31
Identities = 72/242 (29%), Positives = 135/242 (55%), Gaps = 1/242 (0%)
Query: 5 IIETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIKI 64
+IE +L+K + R VV +N+ + KG + G LGPNGAGK+TTI M++ ++PT G++ I
Sbjct: 1 MIEVIDLSKTYRNRQVVKGINMFIEKGEMVGLLGPNGAGKSTTISMISSLIQPTSGDVLI 60
Query: 65 IGMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMAYT 124
G + + I +G +P+ Y D+T E L + G++ GL ++ ++ +
Sbjct: 61 KGGSIHKRSKAIRSILGVVPQEIAVYHDLTARENLAFFGKIYGLKGEELKHRMESTLQLV 120
Query: 125 GVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILELAK 184
G+ +++ S G ++R+ A AL+ +PEL+I+DEPT +DP R + + L +
Sbjct: 121 GLEERQNDRVHTFSGGMKRRLNIAVALLHEPELIIMDEPTVGIDPQSRSHILETVKTLNQ 180
Query: 185 SGK-TVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAKIESTDYDVVVSDNEKLLK 243
+ TV +SH + E+E +C+ + ++ G++I G ++ I S++ + ++ +
Sbjct: 181 EREMTVIYTSHYMEEVEYLCDRLYIMDRGEVIASGTKDEVKGILSSNQSIKLTTEMYSPR 240
Query: 244 FL 245
FL
Sbjct: 241 FL 242
>dbj|BAB05817.1| (AP001514) ABC transporter (ATP-binding protein) (daunorubicin
resistance) [Bacillus halodurans]
Length = 310
Score = 137 bits (341), Expect = 2e-31
Identities = 79/261 (30%), Positives = 144/261 (54%), Gaps = 7/261 (2%)
Query: 5 IIETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIKI 64
++ET L K F + V +N+ + G G LGPNGAGK+TTI M++ +KPT GEIK+
Sbjct: 1 MLETINLCKTFKGQPAVQEVNMYLNSGESVGLLGPNGAGKSTTISMISTLIKPTSGEIKL 60
Query: 65 IGMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMAYT 124
G+ + I + +G +P+ Y +++ +E L + G + N+ + +
Sbjct: 61 NGINIISHPGDIRKILGVVPQELALYQELSAYENLKFFGSTYKMKGKHLENRIQHALEIV 120
Query: 125 GVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILELAK 184
G+ + ++ S G ++R+ A+AL+ +P++LILDEPT +DP R + + L +
Sbjct: 121 GLKDRQKDLVKTFSGGMKRRINIAAALLHEPKILILDEPTVGIDPQSRNHILETVRTLNE 180
Query: 185 S-GKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAKIESTDYDVVVSDNEKLLK 243
+ G TV +SH + E+E++C+ + ++ G++I G +L I ST+ D + + K+
Sbjct: 181 NEGTTVLYTSHYMEEVEQLCDRLYIMDHGEIIAAGTKEELLSILSTE-DTIKVELSKI-- 237
Query: 244 FLRDKIYVREVWEEEGIVRVK 264
D+ +V+ V EG+ +V+
Sbjct: 238 ---DETFVQNVKMIEGVRKVE 255
>pir||H70610 probable ABC-typetransmembrane transport portein - Mycobacterium
tuberculosis (strain H37RV) >gi|3261727|emb|CAB07840.1|
(Z93777) hypothetical protein Rv1218c [Mycobacterium
tuberculosis]
Length = 311
Score = 136 bits (340), Expect = 3e-31
Identities = 94/304 (30%), Positives = 153/304 (49%), Gaps = 14/304 (4%)
Query: 6 IETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIKII 65
IE + LTK FG + L+L V +G V+GFLGPNGAGK+TT+++L G +K G ++++
Sbjct: 10 IEIRGLTKHFGSVRALDGLDLTVREGEVHGFLGPNGAGKSTTLRILLGLVKADGGSVRLL 69
Query: 66 GMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMAYTG 125
G + + V + R++ Y+P + +T E + + R+ G ++ AR
Sbjct: 70 GGDPWTDAVDLHRHIAYVPGDVTLWPSLTGGETIDLLARMRG-----GIDNARRAELIER 124
Query: 126 VGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILELAKS 185
G K S G RQ+V SAL LL+LDEP+S LDPL F I E +
Sbjct: 125 FGLDPTKKARTYSKGNRQKVSLISALSSHATLLLLDEPSSGLDPLMENVFQQCIGEARQR 184
Query: 186 GKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAKIESTDYDVVVSDNEKLLKFL 245
G TV +SSHI++E E +C V +I+ G+ +E G + L + T + + L +
Sbjct: 185 GVTVLLSSHILAETEALCEKVTIIRAGKTVESGSLDALRHLSRTSIKAEMIGDPGDLSQI 244
Query: 246 RDKIYVREVWEEEGIVRVKLDERFSEKFFLELPAFLASEKLAIKLFKPHTSPLERILMKR 305
+ V ++ E VR ++D + EL L + + +P T LE + ++
Sbjct: 245 KG---VEDISIEGTTVRAQVD----SESLRELIQVLGHAGVRSLVSQPPT--LEELFLRH 295
Query: 306 FNMG 309
+++G
Sbjct: 296 YSLG 299
>gb|AAC17172.1| (AF065141) ABC transporter ATP-binding protein homolog
[Streptococcus mutans]
Length = 293
Score = 136 bits (338), Expect = 4e-31
Identities = 85/252 (33%), Positives = 144/252 (56%), Gaps = 8/252 (3%)
Query: 5 IIETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIKI 64
++E K L+K +G++ + N+NL + KG +YG +G NGAGKTT IK++T ++P+ G + +
Sbjct: 4 VLEIKHLSKRYGQQLALDNVNLTIQKGEIYGLIGKNGAGKTTLIKVITKLIQPSQGSVSV 63
Query: 65 IGMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPK-DKAVNQARELMAY 123
G E ++ VG + E P+A + +T + L Y + +P DK ++++ L+
Sbjct: 64 FGSSTQSEWTHALKRVGSVIETPVALNHLTARQNLHYYCKARHVPNADKVIDESLTLVGL 123
Query: 124 TGVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILEL- 182
T G+ K S G +QR+ A AL+ P+ LILDEP + LDP+ EF I +L
Sbjct: 124 TNTGK---KKFRGFSLGMKQRLGIAIALIVKPDFLILDEPINGLDPVAIKEFRHMIKKLN 180
Query: 183 AKSGKTVFISSHIVS-EIERMCNYVGLIKDGQLIEQGKVRDLAKIESTDYDVV-VSDNEK 240
+ TV ISSHI+S E+ ++ G+I++G++I++ D +S DY V+ S +
Sbjct: 181 EEHDMTVIISSHILSDELYQVATKFGIIENGRIIKEISKADF-DTQSEDYIVLKTSHINE 239
Query: 241 LLKFLRDKIYVR 252
+ L+D++ R
Sbjct: 240 ASQILQDQMNYR 251
>emb|CAB94564.1| (AL359152) putative ABC transporter ATP-binding subunit
[Streptomyces coelicolor A3(2)]
Length = 423
Score = 136 bits (338), Expect = 4e-31
Identities = 80/227 (35%), Positives = 125/227 (54%), Gaps = 5/227 (2%)
Query: 5 IIETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIKI 64
+IE LTK +G + VYNL+ +V GAV GFLGPNG+GK+TT++M+ G PT G +
Sbjct: 1 MIEAVGLTKRYGDKTAVYNLSFQVRPGAVTGFLGPNGSGKSTTMRMILGLDNPTAGHV-T 59
Query: 65 IGMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMAYT 124
IG R R+VG + + + L+ + +L G+P + E++
Sbjct: 60 IGGHPYRRLPNAARHVGALLDAKAVHGGRAARNHLLSLAQLSGIP----ARRVDEVLGVV 115
Query: 125 GVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILELAK 184
G+ +A + + S G QR+ A+AL+GDP++L+ DEP + LDP G + LA
Sbjct: 116 GLQDVAKRRSKGFSLGMGQRLGIAAALLGDPQVLLFDEPVNGLDPEGIHWVRNLMKALAA 175
Query: 185 SGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAKIESTDY 231
G+TVF+SSH++SE+ +++ +I GQL+ V D S D+
Sbjct: 176 EGRTVFVSSHLMSEMALTADHLIVIGRGQLMADMSVTDFISANSADF 222
>sp|P23703|NODI_RHILO NODULATION ATP-BINDING PROTEIN I >gi|95215|pir||S13590 nodulation
protein nodI - Rhizobium meliloti
>gi|581510|emb|CAA39236.1| (X55705) nodulation gene;
integral membrane protein; homology to Rhizobium
leguminosarum nodI [Mesorhizobium loti]
Length = 339
Score = 135 bits (337), Expect = 6e-31
Identities = 69/216 (31%), Positives = 121/216 (55%)
Query: 3 TYIIETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEI 62
T ++ +TK +G + VV L+ V G +G LGPNGAGK+T +ML G P G I
Sbjct: 38 TVAVDFAGVTKSYGNKIVVDELSFSVASGECFGLLGPNGAGKSTIARMLLGMTCPDAGAI 97
Query: 63 KIIGMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMA 122
++G+ +P R +G +P+ ++T+ E L+ GR G+ ++ L+
Sbjct: 98 TVLGVPVPARARLARRGIGVVPQFDNLDQELTVRENLLVFGRYFGMSTRQSEAVIPSLLE 157
Query: 123 YTGVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILEL 182
+ + R A ++ ELS G ++ + A AL+ DP+L+++DEPT+ LDP R ++ L
Sbjct: 158 FARLERKANARVSELSGGMKRCLTMARALINDPQLIVMDEPTTGLDPHARHLIWERLRAL 217
Query: 183 AKSGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQG 218
GKT+ +++H + E ER+C+ + +++ G+ I +G
Sbjct: 218 LARGKTIILTTHFMEEAERLCDRLCVLEKGRNIAEG 253
>gb|AAB61132.1| (U61158) GdmF [Staphylococcus gallinarum]
Length = 231
Score = 135 bits (336), Expect = 8e-31
Identities = 77/233 (33%), Positives = 137/233 (58%), Gaps = 7/233 (3%)
Query: 1 MPTYIIETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYG 60
M Y IET++LTK F K ++ ++NLKV VYG LG NGAGK+T +K++ G L T G
Sbjct: 1 MDYYKIETQKLTKQFKKETILKDINLKVYPNEVYGLLGINGAGKSTLMKIICGILPQTNG 60
Query: 61 EIKIIGMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQAREL 120
++ + G + R+ + N+G + E P Y+ ++ + L +++ L ++ ++ ++
Sbjct: 61 DVYLDGSPLTRQE---LTNIGSLIESPPTYNHLSAQDNL----KVVALNENIDFSEIPKV 113
Query: 121 MAYTGVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKIL 180
+ + K++ S G +QR+ A AL+ P+LL+LDEP++ LDP G E +
Sbjct: 114 LDLVNLDVDPKKKVKNFSLGMKQRLGIAMALIKKPKLLVLDEPSNGLDPYGIQELRDLLK 173
Query: 181 ELAKSGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAKIESTDYDV 233
L K+ +V ISSHI+SEI+++ +++G+I +G+L Q K + +E +++
Sbjct: 174 NLTKANTSVIISSHILSEIQQLADHIGIIHNGKLEYQEKNKTDENLEEIFFNI 226
>sp|P19844|NOSF_PSEST COPPER TRANSPORT ATP-BINDING PROTEIN NOSF >gi|95000|pir||S13584
nosF protein - Pseudomonas stutzeri
>gi|45849|emb|CAA37716.1| (X53676) ATP-binding protein,
peripheral [Pseudomonas stutzeri]
Length = 308
Score = 134 bits (335), Expect = 1e-30
Identities = 73/218 (33%), Positives = 122/218 (55%), Gaps = 6/218 (2%)
Query: 6 IETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIKII 65
+E + +++ +G V+++LNL + +G V G G NGAGKTT++K++ G L P+ G++K++
Sbjct: 4 VEIQGVSQRYGSMTVLHDLNLNLGEGEVLGLFGHNGAGKTTSMKLILGLLSPSEGQVKVL 63
Query: 66 GMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMAYTG 125
G +V+ R +GY+PE Y ++ E L + RL G A+ Q EL+ G
Sbjct: 64 GRAPNDPQVR--RQLGYLPENVTFYPQLSGRETLRHFARLKGA----ALTQVDELLEQVG 117
Query: 126 VGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILELAKS 185
+ A +++ S G RQR+ A AL+G+P LL+LDEPT LDP+ + I L +
Sbjct: 118 LAHAADRRVKTYSKGMRQRLGLAQALLGEPRLLLLDEPTVGLDPIATQDLYLLIDRLRQR 177
Query: 186 GKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDL 223
G ++ + SH++ +E N ++ G L G + L
Sbjct: 178 GTSIILCSHVLPGVEAHINRAAILAKGCLQAVGSLSQL 215
>emb|CAB75312.1| (AL139164) putative ABC transporter ATP-binding protein
[Streptomyces coelicolor A3(2)]
Length = 866
Score = 134 bits (335), Expect = 1e-30
Identities = 76/207 (36%), Positives = 117/207 (55%), Gaps = 3/207 (1%)
Query: 17 KRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIKIIGMEMPRERVKI 76
+R V L+ +V KG V G LGPNGAGKTTT++ML G +KP GEI++ G + R +
Sbjct: 579 ERYAVRELSFRVEKGQVLGLLGPNGAGKTTTLRMLMGLIKPDDGEIRVFGHAI-RPGAPV 637
Query: 77 MRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMAYTGVGRLAFNKIEE 136
+ VG E ++ E L R G P + A E + G+G +
Sbjct: 638 LSRVGAFVEGAGFLPHLSGRENLELYWRATGRPPENA--HLDEALEIAGLGDALARAVRT 695
Query: 137 LSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILELAKSGKTVFISSHIV 196
S G RQR+ A A++G P+LLILDEPT+ LDP E ++ A +G+TV +SSH++
Sbjct: 696 YSQGMRQRLAIAQAMLGLPDLLILDEPTNGLDPPQIREMREVMIRYAAAGRTVIVSSHLL 755
Query: 197 SEIERMCNYVGLIKDGQLIEQGKVRDL 223
+E+E+ C ++ ++ G+L++ G V ++
Sbjct: 756 AEVEQSCTHLVVMDRGRLVQAGPVAEI 782
>pir||B75076 daunorubicin resistance ATP-binding protein drra PAB1703 -
Pyrococcus abyssi (strain Orsay)
>gi|5458423|emb|CAB49911.1| (AJ248286) DAUNORUBICIN
RESISTANCE ATP-BINDING PROTEIN DRRA [Pyrococcus abyssi]
Length = 314
Score = 134 bits (333), Expect = 2e-30
Identities = 81/275 (29%), Positives = 147/275 (53%), Gaps = 10/275 (3%)
Query: 5 IIETKELTKFF----GKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYG 60
I+E K +TK F G+ V N++ G V G LGPNGAGKTTT++M+ +P G
Sbjct: 3 ILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSG 62
Query: 61 EIKIIGMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQAREL 120
E+ + G++ + +++ + + YM + P +++ ++++Y R G K A ++
Sbjct: 63 EVLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCEDI 122
Query: 121 MAYTGVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKIL 180
+ G+ A K +LS+G ++RV A AL D L+ LDEPT+ +DP + + I
Sbjct: 123 LELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIK 182
Query: 181 E-LAKSGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAKIESTDYDVVVSDNE 239
E L G TV ++SH + E+E + + V ++ G+++ +G ++L K +V+ +
Sbjct: 183 EKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFGKTVRIVLEEPI 242
Query: 240 KLLKFLRDKIY-VREVWEEEGIVRVKLDERFSEKF 273
K + L++++ V+ V + VR+ D+ F F
Sbjct: 243 KNFELLKEELLRVKNVKD----VRLARDDSFDVYF 273
>pir||E83222 NosF protein PA3394 [imported] - Pseudomonas aeruginosa (strain
PAO1) >gi|9949530|gb|AAG06782.1|AE004760_10 (AE004760)
NosF protein [Pseudomonas aeruginosa]
Length = 304
Score = 134 bits (333), Expect = 2e-30
Identities = 89/304 (29%), Positives = 149/304 (48%), Gaps = 24/304 (7%)
Query: 5 IIETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIKI 64
++E T +G + L+L++ G V G LG NGAGKTTTIK++ G L P+ G +++
Sbjct: 3 LVEIDGATLRYGALTALSGLDLRLEPGEVLGLLGHNGAGKTTTIKLVLGLLAPSEGRVRV 62
Query: 65 IGMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMAYT 124
+G + ++ R +GY+PE Y ++ E L + RL G+ A +A L+
Sbjct: 63 LGHDA--RSLEARRQLGYLPENVTFYPQLSGAETLRHFARLKGV----APAEAARLLEQV 116
Query: 125 GVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILELAK 184
G+G A +++ S G RQR+ A AL+G+P LL+LDEPT LDPL +E + L
Sbjct: 117 GLGHAARRRLKTYSKGMRQRLGLAQALLGEPRLLLLDEPTVGLDPLATVELYQLLDRLRG 176
Query: 185 SGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAKIES--TDYDVVVSDNEKLL 242
G + + SH++ +E + ++ G+L G + +L + + T + N + L
Sbjct: 177 QGTGIVLCSHVLPGVETHIDRAAILAGGRLQVAGSLAELRRKAALPTRVRLASPHNPQWL 236
Query: 243 KFLRDKIYVREVWEEEGIVRVKLDERFSEKFFLE------LPAFLASEKLAIKLFKPHTS 296
E W G+ +LD++ E + L A LA+ + +++ P
Sbjct: 237 ----------ERWHRAGLAARRLDDQRIEVLLDDAERDGVLEALLAAREFDLEILPPSLE 286
Query: 297 PLER 300
L R
Sbjct: 287 DLYR 290
>sp|P50332|NODI_RHIGA NODULATION ATP-BINDING PROTEIN I >gi|1001916|emb|CAA60881.1|
(X87578) nodI [Rhizobium galegae]
Length = 347
Score = 133 bits (332), Expect = 2e-30
Identities = 69/217 (31%), Positives = 123/217 (55%)
Query: 2 PTYIIETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGE 61
PT I+ + +T + + VV +L+ V G +G LGPNGAGK+T +ML G P+ G+
Sbjct: 45 PTMAIDLQAVTMIYRDKTVVDSLSFGVRAGECFGLLGPNGAGKSTITRMLLGMATPSAGK 104
Query: 62 IKIIGMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELM 121
I ++G+ +P + ++G + + + T+ E L+ GR + L+
Sbjct: 105 ISVLGLPVPGKARLARASIGVVSQFDNLDMEFTVRENLLVFGRYFQMSTRAIEKLIPSLL 164
Query: 122 AYTGVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILE 181
+ + A ++ +LS G ++R+ A AL+ DP+LLILDEPT+ LDP R + ++
Sbjct: 165 EFAQLEAKADVRVSDLSGGMKRRLTLARALVNDPQLLILDEPTTGLDPPARHQIWERLRS 224
Query: 182 LAKSGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQG 218
L GKT+ +++H++ E ERMC+ + +++ G++I +G
Sbjct: 225 LLIRGKTILLTTHMMDEAERMCDRLCVLEGGRMIAEG 261
>pir||H75157 daunorubicin resistance ATP-binding protein (drra-2) PAB2068 -
Pyrococcus abyssi (strain Orsay)
>gi|5457853|emb|CAB49343.1| (AJ248284) daunorubicin
resistance ATP-binding protein (drrA-2) [Pyrococcus
abyssi]
Length = 318
Score = 133 bits (332), Expect = 2e-30
Identities = 98/325 (30%), Positives = 157/325 (48%), Gaps = 28/325 (8%)
Query: 6 IETKELTKFFGKR-----------NVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGA 54
IE K L K + K+ + + V KG ++G LGPNGAGKTTTIK+LT
Sbjct: 4 IEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKILTTL 63
Query: 55 LKPTYGEIKIIGMEMPRERVKIMRNVGYMPE-RPLAYDDMTIFEFLVYMGRLLGLPKDKA 113
L+PT GE +++G ++ +E +I + + + E Y +T +E L Y + +PK A
Sbjct: 64 LEPTSGEARVLGFDIVKEAREIRKRINLVAEGERTLYWRLTAYENLRYFASIYYVPKKVA 123
Query: 114 VNQARELMAYTGVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRM 173
+ R L+ G+ + + S G +QR+ A AL+ DPE+L LDEPT LD +
Sbjct: 124 EERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQSAI 183
Query: 174 ---EFIGKILELAKSGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAKIESTD 230
E I K++E K KTV +++H + E E +C+ + +I G++I L K+ D
Sbjct: 184 FVRELIKKLVEEEK--KTVLLTTHYMHEAEELCDRIAIIDHGRIIALDTPEGLKKLVRKD 241
Query: 231 YDVVVSDNEKLLKFLRDKIYVREVWEEEG---IVRVKLDERFSEKFFLELPAFLASEKLA 287
V V ++ + + + +EEG ++R LDE K L FL
Sbjct: 242 TIVEV----RVKNYNGENPFGLAKIKEEGEKVVLRGPLDEEDIPK----LVEFLVKNNAK 293
Query: 288 IKLFKPHTSPLERILMKRFNMGWKN 312
+ + LE + +K G ++
Sbjct: 294 VLSVEVKEPTLEDVFIKLTGRGLRD 318
>pir||G82993 probable ATP-binding/permease fusion ABC transporter PA5231
[imported] - Pseudomonas aeruginosa (strain PAO1)
>gi|9951539|gb|AAG08616.1|AE004935_13 (AE004935)
probable ATP-binding/permease fusion ABC transporter
[Pseudomonas aeruginosa]
Length = 916
Score = 133 bits (332), Expect = 2e-30
Identities = 81/235 (34%), Positives = 133/235 (56%), Gaps = 8/235 (3%)
Query: 2 PTYIIETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGE 61
P IE + LT FG V +++ ++ +G ++GFLG NG GK+TT+KMLTG L + G
Sbjct: 271 PRIAIEAEGLTCRFGDFVAVDHVSFRIERGEIFGFLGSNGCGKSTTMKMLTGLLPASEGT 330
Query: 62 IKIIGMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELM 121
+ G + + R VGYM + Y ++++ + LV RL LP D + E++
Sbjct: 331 CALFGQPVDASDMATRRRVGYMSQAFSLYAELSVRQNLVLHARLFHLPADGIPARVGEML 390
Query: 122 AYTGVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILE 181
+ ++A +L G RQR+ A A++ PE+LILDEPTS +DP+ R F ++E
Sbjct: 391 RRFDLEKVADELPNDLPLGIRQRLSLAVAVIHKPEILILDEPTSGVDPVARDGFWELMVE 450
Query: 182 LA-KSGKTVFISSHIVSEIERMCNYVGLIKDGQLI------EQGKVRDLAKIEST 229
L+ + G T+FIS+H ++E +R C+ + L+ G+++ E + R L +E+T
Sbjct: 451 LSRRDGVTIFISTHFMNEAQR-CDRISLMHAGKVLASDTPDELVRQRGLPTLEAT 504
Score = 117 bits (291), Expect = 1e-25
Identities = 69/222 (31%), Positives = 126/222 (56%), Gaps = 9/222 (4%)
Query: 15 FGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIKIIGMEMP--RE 72
+G+ V +++L++P + G +GP+G GK++ + +L GA K GEI+++ +M R
Sbjct: 18 YGETRAVDDVSLEIPANRMVGLIGPDGVGKSSLLALLAGARKMQDGEIRVLDGDMRDRRH 77
Query: 73 RVKIMRNVGYMPER--PLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMAYTGVGRLA 130
R + + YMP+ Y +++FE + + GRL G K + + +L+ TG+ A
Sbjct: 78 RRAVCPRIAYMPQGLGKNLYPTLSVFENVDFFGRLFGHDKAERERRIADLLQSTGLAPFA 137
Query: 131 FNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEF---IGKILELAKSGK 187
+LS G +Q++ AL+ DP+LLILDEPT+ +DPL R +F IG+I + G
Sbjct: 138 ERPAGKLSGGMKQKLGLCCALIHDPDLLILDEPTTGVDPLSRNQFWELIGRI-RAGREGM 196
Query: 188 TVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAKIEST 229
+V +++ + E ER +++ + DG+++ G ++L + T
Sbjct: 197 SVLVATAYMEEAERF-DWLVAMDDGKVLATGTPQELRERTGT 237
>gb|AAB61163.1| (U77778) putative ABC transporter subunit [Staphylococcus
epidermidis] >gi|1586615|prf||2204285A epiF gene
[Staphylococcus epidermidis]
Length = 231
Score = 132 bits (330), Expect = 4e-30
Identities = 78/233 (33%), Positives = 133/233 (56%), Gaps = 7/233 (3%)
Query: 1 MPTYIIETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYG 60
M Y IET+ L K F K ++ ++NLKV VYG LG NGAGK+T +K++ G L T G
Sbjct: 1 MTYYKIETRNLNKRFKKETILKDINLKVYPNEVYGLLGINGAGKSTLMKIICGILPQTSG 60
Query: 61 EIKIIGMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQAREL 120
+I + G + R K + N+G + E P Y+ ++ + L +++ L ++ N+ ++
Sbjct: 61 DIYLDGSPLTR---KELTNIGSLIESPPTYNHLSAQDNL----KVVALNENIDFNEISKV 113
Query: 121 MAYTGVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKIL 180
+ + K++ S G +QR+ A AL+ P+LL+LDEP++ LDP G E +
Sbjct: 114 LELVNLNVEPQKKVKNFSLGMKQRLGIAMALIKKPKLLVLDEPSNGLDPYGIQELRELLK 173
Query: 181 ELAKSGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAKIESTDYDV 233
L +V ISSHI+SEI+++ ++VG+I +G+L Q + + +E +++
Sbjct: 174 SLTNLNTSVIISSHILSEIQQLADHVGIIHNGKLEYQEENKTDENLEDVFFNI 226
>pir||C69012 ABC transporter (ATP-binding, daunorubicin resistance) -
Methanobacterium thermoautotrophicum (strain Delta H)
>gi|2622194|gb|AAB85582.1| (AE000880) ABC transporter
(ATP-binding [Methanobacterium thermoautotrophicum]
Length = 312
Score = 132 bits (330), Expect = 4e-30
Identities = 88/309 (28%), Positives = 156/309 (50%), Gaps = 6/309 (1%)
Query: 4 YIIETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIK 63
+IIET+++ K + + V +NL+VP+G++YG LGPNGAGKTT I ML L+PT G
Sbjct: 3 HIIETEDIKKKYDEFLAVKGVNLRVPEGSIYGVLGPNGAGKTTLISMLCTILRPTGGRGT 62
Query: 64 IIGMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMAY 123
+ G ++ R+ K+ ++G + + D +T E L L G+P+D + E++
Sbjct: 63 VNGYDIVRDARKVRESIGIVFQSRALDDILTGREHLEMHAALYGVPRDVRDRRIEEVLEL 122
Query: 124 TGVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILEL- 182
+G A ++ S G ++R+ L+ P +L LDEPT LDP R E I + +E
Sbjct: 123 IALGDKADEYVKTYSGGMKRRLEIGRGLIHHPRVLFLDEPTLGLDPQTR-ESIWRYIEKL 181
Query: 183 -AKSGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAKIESTDYDVVVSDNEK- 240
+ TV +++H + E +++C+ V ++ G++I+ +L + D V D +
Sbjct: 182 NREEDVTVLLTTHYMEEADKLCDEVAIMSHGEIIKADSPGNLKRELGADTITVRVDRARG 241
Query: 241 LLKFLRDKIYVREVWEEEGIVRVKLDERFSEKFFLELPAFLASEKLAIKLFKPHTSPLER 300
+ L + YV+E + + V+V ++ E E+ A ++ + LE
Sbjct: 242 FHEILEKQDYVKEAYLMDDEVKVLVER--GENLVPEIVNLAARNNYYVRAVELEHPTLED 299
Query: 301 ILMKRFNMG 309
+ +K G
Sbjct: 300 VFIKYTGRG 308
>pir||C71197 probable ATP-binding transport protein - Pyrococcus horikoshii
>gi|3258287|dbj|BAA30970.1| (AP000007) 318aa long
hypothetical ATP-binding transport protein [Pyrococcus
horikoshii]
Length = 318
Score = 132 bits (330), Expect = 4e-30
Identities = 76/246 (30%), Positives = 134/246 (53%), Gaps = 17/246 (6%)
Query: 5 IIETKELTKFFGKR-----------NVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTG 53
+IE + L K + K+ + + +V KG ++G LGPNGAGKTTTIK+LT
Sbjct: 3 VIEVRNLRKLYPKKIPLPFRKVEWFEALKGITFRVKKGELFGLLGPNGAGKTTTIKILTT 62
Query: 54 ALKPTYGEIKIIGMEMPRERVKIMRNVGYMPE-RPLAYDDMTIFEFLVYMGRLLGLPKDK 112
L+P+ GE K++G+++ ++ +I + + + E Y +T +E L Y + +P+ +
Sbjct: 63 LLEPSSGEAKVLGLDVVKDAREIRKRINLVAEGERTLYWRLTAYENLRYFASIYYIPRRE 122
Query: 113 AVNQARELMAYTGVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGR 172
A + EL+ G+ + + S G +QR+ A AL+ DPE+L LDEPT LD
Sbjct: 123 AEKRIEELLKMVGLWDRRNDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQSA 182
Query: 173 M---EFIGKILELAKSGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAKIEST 229
+ E + ++++ + GKTV +++H ++E E +C+ + +I G++I L ++
Sbjct: 183 VFVRELVRRLVD--EEGKTVLLTTHYMNEAEELCDRIAIIDHGKIIALNTPEGLKRMVRN 240
Query: 230 DYDVVV 235
D V V
Sbjct: 241 DTIVEV 246
>pir||D75447 ABC transporter, ATP-binding protein - Deinococcus radiodurans
(strain R1) >gi|6458742|gb|AAF10588.1|AE001953_2
(AE001953) ABC transporter, ATP-binding protein
[Deinococcus radiodurans]
Length = 307
Score = 132 bits (330), Expect = 4e-30
Identities = 87/249 (34%), Positives = 133/249 (52%), Gaps = 7/249 (2%)
Query: 6 IETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIKII 65
+E + L+K +G+ NV+ ++ L V G VY GPNGAGKTT I+MLTG PT GE++I+
Sbjct: 12 VEVRGLSKSYGRANVLTDVFLNVIPGEVYALTGPNGAGKTTLIRMLTGLAFPTRGEVRIM 71
Query: 66 GMEMPRERVKIMRNVGYMPERPLA-YDDMTIFEFLVYMGRLLGLPKDKAVNQARELMAYT 124
G+ + + + +G + E P Y T E L L G + E++A
Sbjct: 72 GVNVHTDGPRARALMGAVVEAPAKFYPQFTGTENLKIHASLTG--AGVGPGRISEVLALL 129
Query: 125 GVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILELAK 184
+ + ++ E S GQRQR+ ASA++ +P++LILDEPTS LDPLG + LA
Sbjct: 130 ELTSMGGRRVAEYSLGQRQRLGVASAILAEPKVLILDEPTSGLDPLGIGLIHRIVTSLAT 189
Query: 185 SGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAKIESTDYDVVVSDNEKLLKF 244
SG V +S+H + EI + VG++ G+L++ +R ++ Y V D
Sbjct: 190 SGCAVILSTHHLREIATYAHTVGIMTGGRLVDTVDLRS----RTSAYRFRVDDPVGAAAL 245
Query: 245 LRDKIYVRE 253
L + YVR+
Sbjct: 246 LERQPYVRK 254
>pir||E72384 ABC transporter, ATP-binding protein - Thermotoga maritima (strain
MSB8) >gi|4980892|gb|AAD35474.1|AE001718_11 (AE001718)
ABC transporter, ATP-binding protein [Thermotoga
maritima]
Length = 301
Score = 132 bits (328), Expect = 7e-30
Identities = 82/263 (31%), Positives = 137/263 (51%), Gaps = 12/263 (4%)
Query: 5 IIETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIKI 64
I++ +L K +G V ++ V +G V+ FLGPNGAGKTTT+++L G K GEI
Sbjct: 14 ILKVVDLKKHYGDVKAVDGISFTVERGTVFSFLGPNGAGKTTTVEILEGLRKKDSGEIYY 73
Query: 65 IGMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMAYT 124
G + R +G ++ ++++T++E L L G D +E+M
Sbjct: 74 FGERKDVLDRETKRKIGVCLQKSAFFENLTVWETLKLFRGLYGTGLD-----LKEVMGLF 128
Query: 125 GVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILELAK 184
+ + ++ LS GQ QR+ A A + DPE++ LDEPT+ LDP R + I
Sbjct: 129 SLENIEKKMVKTLSGGQLQRLAVAVAFINDPEIVFLDEPTTGLDPQARRQIWDTIEHFKN 188
Query: 185 SGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAKIESTDYDVVVS---DNEKL 241
GKT+F+++H + E ER+ ++V +I G++I +G L I S+ VV D +
Sbjct: 189 LGKTIFLTTHYMEEAERLSDHVCIIDHGKIIAEGTPSSL--ISSSGLKTVVEFDCDQDVN 246
Query: 242 LKFL--RDKIYVREVWEEEGIVR 262
+++L ++ YV E E +++
Sbjct: 247 VRYLEKKENHYVVETDAPEELIK 269
>pir||T36741 probable ABC-type transport system ATP-binding protein -
Streptomyces coelicolor >gi|5531429|emb|CAB50934.1|
(AL096849) putative ABC-transporter ATP-binding protein
[Streptomyces coelicolor A3(2)]
Length = 332
Score = 132 bits (328), Expect = 7e-30
Identities = 80/241 (33%), Positives = 129/241 (53%), Gaps = 2/241 (0%)
Query: 3 TYIIETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEI 62
TY + ++ L K FG + L+L VP+G V G LGPNGAGKTT +++LT L+P G
Sbjct: 4 TYAVLSEGLEKRFGTVRALRGLDLAVPEGTVCGLLGPNGAGKTTAVRLLTTLLRPDAGSA 63
Query: 63 KIIGMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMA 122
++ G ++ RE + R +G + D+T + L RL + +D A +A EL+
Sbjct: 64 RVAGHDLVREAAAVRRLIGVTGQYASVDGDLTGRQNLRLFARLHRV-RDAAA-RADELLD 121
Query: 123 YTGVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILEL 182
G+ A LS G R+R+ A++L+ PE+L LDEPT+ LDP GR + L
Sbjct: 122 RFGLAEAADRPAVTLSGGLRRRLDLAASLVRRPEVLFLDEPTTGLDPAGRNRVWETVRAL 181
Query: 183 AKSGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAKIESTDYDVVVSDNEKLL 242
G TV +++ + E +R+ + + L+ G++ G +L + T VV+D + L+
Sbjct: 182 KADGTTVLLTTQYLEEADRLADDIALVDRGRVAHTGSPAELKALVGTYAQAVVADADALV 241
Query: 243 K 243
+
Sbjct: 242 R 242
>pir||C72615 probable transport ATP-binding protein APE1380 - Aeropyrum pernix
(strain K1) >gi|5105063|dbj|BAA80377.1| (AP000061) 316aa
long hypothetical transport ATP-binding protein
[Aeropyrum pernix]
Length = 316
Score = 131 bits (327), Expect = 9e-30
Identities = 102/312 (32%), Positives = 161/312 (50%), Gaps = 18/312 (5%)
Query: 6 IETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIKII 65
+ L+K FG+R N+ G + G LGPNGAGKTT +K + G +KP+ GEI +
Sbjct: 9 VNASALSKRFGQRYAYRNVEFTFTSG-ILGVLGPNGAGKTTLLKTILGLVKPSAGEILVE 67
Query: 66 GMEMPRER--VKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMAY 123
G+ PR K++ +GY+PE P+ T L + RL G +A +ARE +
Sbjct: 68 GVN-PRSPGFEKLLPRIGYVPELPVVPLWTTPCILLETLARLEGYTSVEARVRAREALEV 126
Query: 124 TGVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILEL- 182
G+ I +LS G R+RVL A A +G+ ELL+LDEP S LDP E++ ++ EL
Sbjct: 127 VGLAGECETPIGKLSKGARKRVLVAQAFIGERELLVLDEPYSGLDP----EWVYRVRELL 182
Query: 183 ---AKSGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDL-AKIESTDYDVV-VSD 237
A+ G TV +SSHI+ E+E + +V ++K QL G + +L A + T ++ V++
Sbjct: 183 RTVAREGATVIVSSHILRELEDIATHVLVLKTDQLF-YGSIEELRAWLSGTPRIILSVAE 241
Query: 238 NEKLLKFLRDKIYVREVWEEEGIVRVKLDERFSEKFFLELPAFLASEKLAIKLFKPHTSP 297
E+ ++ LR + + G + V ++ L L L +E + I ++ +
Sbjct: 242 PERAVEVLRRGGFNAYTINKGGQLVVAVEGADDPARVLSL---LLAENIEISEYRVEKAS 298
Query: 298 LERILMKRFNMG 309
LE +K G
Sbjct: 299 LEEAYLKLVGAG 310
>emb|CAB88835.1| (AL353832) putative ABC-transport protein, ATP-binding component.
[Streptomyces coelicolor A3(2)]
Length = 354
Score = 131 bits (327), Expect = 9e-30
Identities = 74/223 (33%), Positives = 130/223 (58%), Gaps = 2/223 (0%)
Query: 21 VYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIKIIGMEMPRERVKIMRNV 80
V L+ V +G + G++GPNGAGK+TTIKMLTG L P+ G +++ G++ RER+++ +
Sbjct: 66 VDGLSFTVSRGEMVGYIGPNGAGKSTTIKMLTGILTPSGGRLRVAGIDPSRERIRLAHRI 125
Query: 81 GYM-PERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMAYTGVGRLAFNKIEELSS 139
G + +R + D+ + + M R+ +P + + + L + +LS
Sbjct: 126 GVVFGQRTTLWWDLPLIDSYRLMHRMYRIPDARYRENLDRCVELLQLQELLDVPVRQLSL 185
Query: 140 GQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILEL-AKSGKTVFISSHIVSE 198
GQR R A+AL+ DPE+L LDEPT LD + + + G +L+L A+ G TV +++H + +
Sbjct: 186 GQRMRGDIAAALLHDPEVLYLDEPTIGLDVVSKAKVRGFLLDLNAERGTTVLLTTHDLQD 245
Query: 199 IERMCNYVGLIKDGQLIEQGKVRDLAKIESTDYDVVVSDNEKL 241
IE++C+ V +I G+L+ G++ L + ++ +VV +L
Sbjct: 246 IEQLCSRVMVIDHGRLMYDGRLEGLHEAGESERTLVVDLEREL 288
>dbj|BAB07612.1| (AP001520) ABC transporter (ATP-binding protein) [Bacillus
halodurans]
Length = 282
Score = 131 bits (327), Expect = 9e-30
Identities = 71/219 (32%), Positives = 124/219 (56%), Gaps = 11/219 (5%)
Query: 4 YIIETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIK 63
++IE K L K F + + +++ + +G +GFLGP+GAGKTTTIK+LTG ++ GE+
Sbjct: 3 HVIEVKHLRKTFDGKEALKDVSFSIKRGETFGFLGPSGAGKTTTIKILTGQVRSFDGEVA 62
Query: 64 IIGMEMPR-ERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMA 122
+ G + R +R M +G + + Y+ +T+ + L +L +P+ + +++A
Sbjct: 63 LFGKPVHRLKRKTFMSQIGVLTDNSGLYERLTVQDNLSMYCKLYSVPE----RRIHDVLA 118
Query: 123 YTGVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILEL 182
G+ + +LS G +QRV+ A A++ P+LL LDEPTS LDP + L
Sbjct: 119 EVGLRDERAKIVSKLSKGMKQRVILARAMLHKPDLLFLDEPTSALDPASSHMIHDSLRRL 178
Query: 183 AKSGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVR 221
+ G T+F+++H + E E++C+ V ++QGK+R
Sbjct: 179 NREGTTIFLTTHDMLEAEKICDRVA------FLDQGKIR 211
>pir||F70501 probable ABC-typetransport protein - Mycobacterium tuberculosis
(strain H37RV) >gi|2326730|emb|CAB10944.1| (Z98268)
hypothetical protein Rv1687c [Mycobacterium
tuberculosis]
Length = 255
Score = 131 bits (325), Expect = 1e-29
Identities = 76/216 (35%), Positives = 123/216 (56%), Gaps = 13/216 (6%)
Query: 2 PTYIIETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGE 61
P II+ +L GKR + +++++V G + G LGP+G+GKTT I+ + G+ G
Sbjct: 16 PAVIID--QLRVIRGKRLALQDVSVRVACGTITGLLGPSGSGKTTLIRCIVGSQIIASGS 73
Query: 62 IKIIGMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKA--VNQARE 119
+ ++G P ++ VGYMP+ P Y+D+ + + + Y L G+ + A V +A +
Sbjct: 74 VSVLGQ--PAGSAELRHRVGYMPQDPTIYNDLRVIDNIRYFAELCGVDRQAADEVIEAVD 131
Query: 120 LMAYTGVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKI 179
L + + LS GQR RV A AL+G P+LL+LDEPT LDP+ R+E +
Sbjct: 132 LRDHRTA------RCANLSGGQRARVSLACALVGRPDLLVLDEPTIGLDPVLRVELWDRF 185
Query: 180 LELAKSGKTVFISSHIVSEIERMCNYVGLIKDGQLI 215
LA+ G T+ +SSH++ E +R C + L++ GQL+
Sbjct: 186 TALARRGTTLLVSSHVMDEADR-CGDLLLLRQGQLL 220
>pir||D72484 probable ATP-binding protein APE2516 - Aeropyrum pernix (strain
K1) >gi|5106221|dbj|BAA81532.1| (AP000064) 323aa long
hypothetical ATP-binding protein [Aeropyrum pernix]
Length = 323
Score = 130 bits (324), Expect = 2e-29
Identities = 69/205 (33%), Positives = 118/205 (56%), Gaps = 3/205 (1%)
Query: 24 LNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIKIIGMEMPRERVKIMRNVGYM 83
++LKV +G ++ LGPNGAGKTT +K+L+ L P G ++ G ++ RE + +G +
Sbjct: 32 VDLKVGRGTLFSLLGPNGAGKTTLVKILSTLLLPDSGWARVAGFDVVREANNVRSRIGVV 91
Query: 84 --PERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMAYTGVGRLAFNKIEELSSGQ 141
ER L Y ++ ++ L + +L G+P +A + +EL+ G+ A ++E S G
Sbjct: 92 LGGERAL-YWRLSGWDNLWFFSQLYGIPPREAKRRVKELLEIVGLEEWAHVRVENYSKGM 150
Query: 142 RQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILELAKSGKTVFISSHIVSEIER 201
+QR+ A L+ DPE+L+LDEPT LDP E I + + G+TV +++H + E E
Sbjct: 151 KQRLHIARGLINDPEVLLLDEPTIGLDPKAAREVRSIIRRIVREGRTVLLTTHYMVEAEE 210
Query: 202 MCNYVGLIKDGQLIEQGKVRDLAKI 226
+ + V +I G+++ +G DL +
Sbjct: 211 LSDRVAIISKGRIVAEGPPEDLKSL 235
>sp|P72335|NODI_RHIS3 NODULATION ATP-BINDING PROTEIN I >gi|1531621|gb|AAB16898.1|
(U53327) NodI [Rhizobium sp. N33]
Length = 304
Score = 130 bits (323), Expect = 3e-29
Identities = 69/218 (31%), Positives = 118/218 (53%)
Query: 1 MPTYIIETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYG 60
M I+ + K FG + VV L+ V G +G LGPNGAGK+T +ML G P G
Sbjct: 1 MSKVAIDLAGVKKSFGDKLVVNGLSFTVASGECFGLLGPNGAGKSTIARMLLGMTVPDAG 60
Query: 61 EIKIIGMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQAREL 120
+I ++G + +++G +P+ + T+ E L+ GR G+ K L
Sbjct: 61 KITVLGEPVGARSRLARKSIGVVPQFDNLDQEFTVRENLLVFGRYFGMSTRKIKEVIPSL 120
Query: 121 MAYTGVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKIL 180
+ + + A ++ ELS G ++R+ A AL+ DP+LL++DEPT+ LDP R ++
Sbjct: 121 LEFARLESKADARVGELSGGMKRRLTLARALINDPQLLVMDEPTTGLDPHARHLIWERLR 180
Query: 181 ELAKSGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQG 218
L GKT+ +++H + E ER+C+ + +++ G+ + +G
Sbjct: 181 FLLARGKTIILTTHFMEEAERLCDRLCVLEHGRKLAEG 218
>emb|CAB94566.1| (AL359152) putative ABC transporter ATP-binding subunit
[Streptomyces coelicolor A3(2)]
Length = 346
Score = 130 bits (323), Expect = 3e-29
Identities = 81/263 (30%), Positives = 139/263 (52%), Gaps = 5/263 (1%)
Query: 5 IIETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIKI 64
+IE + LTK +G++ V NL+ V G + GFLGPNGAGK+TT++M+ G +PT G+++I
Sbjct: 17 MIELEGLTKRYGEKVAVNNLSFTVRPGIITGFLGPNGAGKSTTMRMVLGLDRPTAGDVRI 76
Query: 65 IGMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMAYT 124
G E + +G + E + + + L+ + + G+P ++ R+++
Sbjct: 77 DGKHYD-ELKDPLTYIGALLEAKAWHGGRSAYNHLLCLAQSNGIP----ASRVRQVLDTV 131
Query: 125 GVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILELAK 184
G+ +A K + S G QR+ A AL+GDP +L+ DEP + LDP G + LA
Sbjct: 132 GLSAVARKKTKGFSLGMGQRLGIAGALLGDPRILMFDEPVNGLDPEGIHWIRNLMKTLAS 191
Query: 185 SGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAKIESTDYDVVVSDNEKLLKF 244
G+TVF+SSH++SE+ +++ +I G+L+ + + S Y + + + L
Sbjct: 192 QGRTVFVSSHLMSEMALTADHLVVIGQGRLLADTSMAEFIAENSRSYVRIRTPQREQLLD 251
Query: 245 LRDKIYVREVWEEEGIVRVKLDE 267
V V EG++ V D+
Sbjct: 252 ALHAAGVTVVESGEGVLEVDGDK 274
>gb|AAK42548.1| ABC transporter, ATP binding protein [Sulfolobus solfataricus]
Length = 248
Score = 129 bits (322), Expect = 3e-29
Identities = 74/224 (33%), Positives = 123/224 (54%), Gaps = 4/224 (1%)
Query: 4 YIIETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIK 63
+ + L K G + ++ L+ V G V+G +GPNGAGKTTT+++L G +K G+ K
Sbjct: 8 FAVSVTNLRKRIGNKEILKGLSFDVESGEVFGIVGPNGAGKTTTLRILAGIIKNFNGDAK 67
Query: 64 IIGMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQAREL-MA 122
+ G+ P E K + YMPE Y+ +T +E L + L + + +L +
Sbjct: 68 VFGLR-PIE-AKQNGYISYMPEDAFPYEKLTGYENLDFYAELYAKGDKELKEKYLKLGIE 125
Query: 123 YTGVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILEL 182
+G ++K E S G ++R++ A LM P+L +LDEPTS LD + ILE+
Sbjct: 126 IANLGERIYDKTAEYSRGMKRRLIIARTLMVMPKLSVLDEPTSALDVESAVRIRNIILEM 185
Query: 183 AKS-GKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAK 225
A+ T+ +SSH + E+E +C+ + LI DG+++ GK +++ K
Sbjct: 186 ARRYNMTIILSSHNMLEVEYLCDRITLINDGRIVANGKPKEIIK 229
>pir||S34187 probable ABC-type transport protein TnrB2 - Streptomyces
longisporoflavus >gi|581708|emb|CAA52012.1| (X73633)
start codon gtg [Streptomyces longisporoflavus]
Length = 300
Score = 129 bits (322), Expect = 3e-29
Identities = 89/296 (30%), Positives = 146/296 (49%), Gaps = 14/296 (4%)
Query: 11 LTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIKIIGMEMP 70
L K FG+ + + L+L V G V+GFLGPNGAGK+TTI++L G L+ G
Sbjct: 4 LHKSFGRTHALDGLDLAVDSGEVHGFLGPNGAGKSTTIRVLLGLLRADSGAPSSSARTPW 63
Query: 71 RERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMAYTGVGRLA 130
++ V + R + Y+P + ++T E + + RL G +++ R
Sbjct: 64 KDAVALHRRLAYVPGDVELWPNLTGGEAIDLLSRLRG-----GLDRQRRDELIERFDLDP 118
Query: 131 FNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILELAKSGKTVF 190
K S G RQ+V +AL D ELL+LDEPT+ LDPL + F IL +GKTV
Sbjct: 119 TKKGRAYSKGNRQKVPIVAALASDAELLLLDEPTAGLDPLMEVVFQDVILRAKAAGKTVL 178
Query: 191 ISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAKIESTDYDVVVSDNEKLLKFLRDKIY 250
+SSHI++++E++C+ V +I+ G+ ++ G + ++ + T V ++ E+ + L
Sbjct: 179 LSSHILAQVEKLCDRVSIIRKGRNVQSGTLTEMRHLTRT---TVEAETERAVTGLDAMAG 235
Query: 251 VREVWEEEGIVRVKLDERFSEKFFLELPAFLASEKLAIKLFKPHTSPLERILMKRF 306
V V E V +D + L F I+ H LE ++++ +
Sbjct: 236 VHAVRVTERRVHFAVDGAHLDAAIHRLGEF------GIRSLTSHPPTLEELMLRHY 285
>pir||T29454 ABC transport protein - Streptomyces coelicolor
>gi|3367766|emb|CAA20091.1| (AL031155) ABC transporter
ATP-binding protein [Streptomyces coelicolor A3(2)]
Length = 312
Score = 129 bits (322), Expect = 3e-29
Identities = 76/239 (31%), Positives = 129/239 (53%), Gaps = 5/239 (2%)
Query: 5 IIETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIKI 64
+IE + LTK +G++ V L+ V G V GFLGPNGAGK+TT++++ G PT G + +
Sbjct: 1 MIEARRLTKRYGEKTAVDGLDFVVKPGTVTGFLGPNGAGKSTTMRLIVGLDAPTSGSVTV 60
Query: 65 IGMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMAYT 124
G R + + VG + E + + + L + G+P + E++
Sbjct: 61 NGHPYAHHRAPL-QEVGALLEAKSIHPGRSAYNHLKALALTHGIPGSRV----DEVIGLA 115
Query: 125 GVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILELAK 184
G+ +A + S G QR+ A+AL+GDP+ ++LDEP + LDP G + + LA
Sbjct: 116 GLDNVAKKRAGAFSLGMGQRLGIAAALLGDPQTVMLDEPVNGLDPEGVLWIRNLLKGLAD 175
Query: 185 SGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAKIESTDYDVVVSDNEKLLK 243
G+TVF+SSH++SE+ + +++ ++ G+L+ V DL + D VV+ + L+
Sbjct: 176 QGRTVFVSSHLMSEMALVADHLIIVGRGRLLADTTVADLIREAGGDTVKVVTQDPARLR 234
>pir||C72336 ABC transporter, ATP-binding protein - Thermotoga maritima (strain
MSB8) >gi|4981293|gb|AAD35847.1|AE001746_8 (AE001746)
ABC transporter, ATP-binding protein [Thermotoga
maritima]
Length = 265
Score = 129 bits (322), Expect = 3e-29
Identities = 88/274 (32%), Positives = 142/274 (51%), Gaps = 26/274 (9%)
Query: 5 IIETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIKI 64
I+ K+L KF+G++ V ++ +V KG ++ LGPNGAGKTTT+K +TG K GEI++
Sbjct: 3 ILRVKDLKKFYGEKAAVDGISFEVEKGEIFAILGPNGAGKTTTLKCITGLRKKDSGEIEL 62
Query: 65 IGMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMAYT 124
G Y+PE Y + + E + ++ +K + E
Sbjct: 63 NG------------TFTYLPEEKKLYPYLRVKEIIDLFKKIGKNFNEKNCLELLERF--- 107
Query: 125 GVGRLAFN-KIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILELA 183
R+ N K+ LS G R + + L + +L ILDEPT LDP+ R E + +I L
Sbjct: 108 ---RIDLNEKVTNLSHGMRTILYLSLVLSENVDLYILDEPTWGLDPIVRNEILDRIRSLT 164
Query: 184 KSGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAKIESTDYDVVVSD---NEK 240
GK+V +SH+++E+E++ + V ++K+G++I G + D+ + Y +VVS N
Sbjct: 165 FEGKSVLYTSHVLAEVEKIADRVAIMKEGKIILTGNLDDI----KSSYGLVVSRENLNGY 220
Query: 241 LLKFLRDKIYVREVWEEEGIVRVKLDERFSEKFF 274
LLK L+ V V +EE VK+++ E F
Sbjct: 221 LLKTLKSGEKVYLVKKEEAPEGVKIEDAAFEDIF 254
>pir||F72742 probable transport ATP-binding protein APE0471 - Aeropyrum pernix
(strain K1) >gi|5104118|dbj|BAA79434.1| (AP000059) 356aa
long hypothetical transport ATP-binding protein
[Aeropyrum pernix]
Length = 356
Score = 129 bits (322), Expect = 3e-29
Identities = 77/235 (32%), Positives = 120/235 (50%), Gaps = 6/235 (2%)
Query: 5 IIETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIKI 64
+IE + L K +G + ++ V G V+G+LGPNGAGKTTTI++L G +PT G ++
Sbjct: 57 VIEVEGLVKRYGSVEALRGVSFSVLSGEVFGYLGPNGAGKTTTIRVLMGFSRPTSGSARV 116
Query: 65 IGMEMPRERVK-IMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMAY 123
G+E+ + R VGY+P Y ++ L Y RL+G V + E
Sbjct: 117 FGVELYNPGASGVRRRVGYVPGEFEFYGGVSGGRMLDYWCRLVGGCSRGVVRELLEAFPL 176
Query: 124 TGVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILELA 183
+ S G +Q + A +P+L+++DEPT+ LDPL R + + A
Sbjct: 177 P-----LERAVGTYSRGMKQMLALVMAFSHEPDLVVMDEPTTGLDPLARGRVLDFVRSKA 231
Query: 184 KSGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAKIESTDYDVVVSDN 238
+ G TVF SSH++SE++R+ + VGL++ G L+ V L + VS N
Sbjct: 232 REGVTVFFSSHVLSEVQRVADRVGLLRSGVLVALEDVSSLLRKSGKVVKARVSKN 286
>pir||D81920 probable ABC-transporter ATP-binding protein NMA0763 [imported] -
Neisseria meningitidis (group A strain Z2491)
>gi|7379484|emb|CAB84046.1| (AL162754) putative
ABC-transporter ATP-binding protein [Neisseria
meningitidis Z2491]
Length = 216
Score = 129 bits (322), Expect = 3e-29
Identities = 67/201 (33%), Positives = 114/201 (56%), Gaps = 5/201 (2%)
Query: 1 MPTYIIETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYG 60
M T+ +E +++TK FG + V ++L + G G G NGAGK+T +K++ G + PT G
Sbjct: 11 MTTHHVELRKVTKRFGAQKAVNQVDLVLKAGESVGLAGHNGAGKSTIMKLILGLITPTEG 70
Query: 61 EIKIIGMEM-PRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARE 119
E+ ++G + ++ +GY+PE + +T E L + +L K + + Q R
Sbjct: 71 EVMLLGERTGSKAGARLRSQIGYLPETVALHPSLTGIETLDFYAKL----KKQPLTQNRG 126
Query: 120 LMAYTGVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKI 179
L+ G+ + A ++ S G RQR+ A AL+G+P++L+ DEPT+ LDP R F +
Sbjct: 127 LLERVGISQAAHRRVGTYSKGMRQRLALAQALLGEPKVLLFDEPTTGLDPASRQMFYEVV 186
Query: 180 LELAKSGKTVFISSHIVSEIE 200
EL G TV +S+H ++E++
Sbjct: 187 RELNGRGATVLLSTHALAELD 207
>gb|AAG19180.1| (AE005015) ABC transporter, ATP-binding protein; Trp5
[Halobacterium sp. NRC-1]
Length = 287
Score = 129 bits (322), Expect = 3e-29
Identities = 74/220 (33%), Positives = 122/220 (54%), Gaps = 5/220 (2%)
Query: 5 IIETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIKI 64
+I + L K +G V ++ V G V+G +GPNGAGKT+T+KML G ++P+ G+I +
Sbjct: 1 MISVQRLEKRYGGVTAVDGVSFDVGAGEVFGLVGPNGAGKTSTLKMLCGLVEPSAGDITV 60
Query: 65 IGMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMAYT 124
G + ++ R +G++PE YD+MT +L + L + D+A R A
Sbjct: 61 NGFDAGDTAMR--RTLGFLPEESPLYDEMTPRSYLRFFADLYDV--DRATANERIEAALD 116
Query: 125 GVGRLAFNK-IEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILELA 183
+ A ++ + + S G ++V A +L+ DP++L+ DEP S LDPL I ELA
Sbjct: 117 RLDLDARDRPVGDFSKGMTRKVAIARSLVNDPDVLVYDEPASGLDPLTTNTVIEFTRELA 176
Query: 184 KSGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDL 223
GKT+ S+H + +E +C+ V +++DGQ G + D+
Sbjct: 177 ADGKTIVFSAHDLHHVESVCDRVAIMRDGQFAATGTLADI 216
>gi|11498626 ABC transporter, ATP-binding protein [Archaeoglobus fulgidus]
>gi|7445710|pir||E69377 ABC transporter, ATP-binding
protein homolog - Archaeoglobus fulgidus
>gi|2649574|gb|AAB90222.1| (AE001033) ABC transporter,
ATP-binding protein [Archaeoglobus fulgidus]
Length = 275
Score = 129 bits (321), Expect = 4e-29
Identities = 72/219 (32%), Positives = 120/219 (53%), Gaps = 11/219 (5%)
Query: 5 IIETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIKI 64
++E + L K +G V ++ V +G V G +G NGAGK+TT+K+L G ++P GE++
Sbjct: 1 MLEVRNLFKRYGSFEAVKGISFSVRRGEVLGLIGENGAGKSTTLKILAGLIRPDGGEVRY 60
Query: 65 IGMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMAYT 124
G + E +I +GY+PE YD+MT+ E+L + + D ++ E +
Sbjct: 61 FGKDFDEEMKRI---IGYLPEIDALYDNMTVSEYLNLFADIYDVRAD--IDGLLERL--- 112
Query: 125 GVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILELAK 184
L I +LS G R++V A L+ DPE+L+ DEPT LDP + + ELA+
Sbjct: 113 ---NLPDKYISDLSKGMRRKVSIARTLLHDPEVLVYDEPTGGLDPTTSLSIAELLRELAE 169
Query: 185 SGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDL 223
GK + S+H + +ER+ + V ++K G+ + G + +L
Sbjct: 170 RGKIIVFSAHNMYYVERIADKVVVMKGGKALYFGSLEEL 208
>pir||D72257 hypothetical protein TM1403 - Thermotoga maritima (strain MSB8)
>gi|4981967|gb|AAD36474.1|AE001793_4 (AE001793)
antibiotic ABC transporter, ATP-binding protein,
putative [Thermotoga maritima]
Length = 327
Score = 129 bits (320), Expect = 6e-29
Identities = 73/225 (32%), Positives = 125/225 (55%), Gaps = 5/225 (2%)
Query: 5 IIETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIKI 64
II + L K FG V ++ V KG ++ FLGPNGAGKTTTI MLT LKPT G+ +
Sbjct: 4 IIVVENLVKKFGDFEAVKGVSFSVKKGEIFAFLGPNGAGKTTTIHMLTTLLKPTSGKAWV 63
Query: 65 IGMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMAYT 124
G ++ +E ++ R +G + + ++T +E + G++ G +K + EL+ +
Sbjct: 64 AGHDVLKEPREVRRKIGIVFQDQSLDRELTAYENMYIHGKIYGYGGEKLKKRILELLEFV 123
Query: 125 GVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGR---MEFIGKILE 181
+ ++ S G +R+ A +L+ +PE+L LDEPT LDP R E+I K+ +
Sbjct: 124 ELLEFKDKPVKTFSGGMARRLEIARSLIHEPEVLFLDEPTIGLDPHTRAHMWEYISKMKK 183
Query: 182 LAKSGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAKI 226
+ T+F+++H + E E++ + V +I G++I G +L ++
Sbjct: 184 --EHNMTIFLTTHYMDEAEQLADRVAIIDHGKIIALGTPTELKRM 226
>sp|P46903|NATA_BACSU ATP-BINDING TRANSPORT PROTEIN NATA (NA+ ABC TRANSPORTER)
>gi|7445612|pir||A69666 Na+ ABC transporter (extrusion)
(ATP-binding protein) natA - Bacillus subtilis
>gi|973330|gb|AAB53022.1| (U30873) NatA [Bacillus
subtilis] >gi|2415726|dbj|BAA22236.1| (AB000617) NatA
[Bacillus subtilis] >gi|2632561|emb|CAB12069.1| (Z99105)
Na+ ABC transporter (ATP-binding protein) [Bacillus
subtilis]
Length = 246
Score = 128 bits (319), Expect = 7e-29
Identities = 75/223 (33%), Positives = 125/223 (55%), Gaps = 6/223 (2%)
Query: 13 KFFGKRNVVY---NLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIKIIGMEM 69
+F K+ VV +++L + KG V G LG NGAGKTT ++M+ L+P+ G I + G +
Sbjct: 10 RFQDKKKVVKAVRDVSLTIEKGEVVGILGENGAGKTTMLRMIASLLEPSQGVITVDGFDT 69
Query: 70 PRERVKIMRNVGYM--PERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMAYTGVG 127
++ ++ + +G + E L YD MT E L Y GRL GL + + + +L G+
Sbjct: 70 VKQPAEVKQRIGVLFGGETGL-YDRMTAKENLQYFGRLYGLNRHEIKARIEDLSKRFGMR 128
Query: 128 RLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILELAKSGK 187
++ S G RQ+V A AL+ DP++++ DEPT+ LD F I +L + K
Sbjct: 129 DYMNRRVGGFSKGMRQKVAIARALIHDPDIILFDEPTTGLDITSSNIFREFIQQLKREQK 188
Query: 188 TVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAKIESTD 230
T+ SSHI+ E++ +C+ V +I G++I +G + L + E ++
Sbjct: 189 TILFSSHIMEEVQALCDSVIMIHSGEVIYRGALESLYESERSE 231
>emb|CAB88481.1| (AL353816) putative ABC transport system ATP-binding protein
[Streptomyces coelicolor A3(2)]
Length = 289
Score = 128 bits (318), Expect = 1e-28
Identities = 75/224 (33%), Positives = 127/224 (56%), Gaps = 5/224 (2%)
Query: 3 TYIIETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEI 62
T + L+ +G+ + +++L++ G V G LGPNGAGKTT +++L A+ G
Sbjct: 2 TPTVSASGLSLHYGRTRALDDVSLRLTPG-VTGLLGPNGAGKTTLLRVLATAVPADRGAF 60
Query: 63 KIIGME--MPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLP-KDKAVNQARE 119
++G + R R ++ R +GY+P+ P + D T FEF+ Y+ L L + + + R
Sbjct: 61 TVLGHDPGSSRGRQEVRRRLGYLPQTPGFHPDFTAFEFVDYVAILKELADRRERHREVRR 120
Query: 120 LMAYTGVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKI 179
++ +G + +I++LS G RQRV A+AL+GDP L+LDEPT LDP RM F ++
Sbjct: 121 VLEEVDLGEVRGRRIKKLSGGMRQRVALAAALVGDPGFLVLDEPTVGLDPEQRMRF-REL 179
Query: 180 LELAKSGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDL 223
+ A G+TV +S+H ++ +C+ V ++ G + G +L
Sbjct: 180 IAGAGEGRTVLLSTHQTEDVAMLCHRVIVMAAGAVRFDGTPAEL 223
>gb|AAG34388.1|AF197468_4 (AF197468) ATP/GTP binding protein; NosF [Pseudomonas fluorescens]
Length = 305
Score = 127 bits (317), Expect = 1e-28
Identities = 77/259 (29%), Positives = 135/259 (51%), Gaps = 9/259 (3%)
Query: 5 IIETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIKI 64
++E + +++ +G V+ L+L + +G V G G NGAGKTTT+K++ G L+ + GE+++
Sbjct: 3 VVEIEGVSQRYGDVAVLRGLDLTLAQGEVLGLFGHNGAGKTTTMKLILGLLRASEGEVRV 62
Query: 65 IGMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMAYT 124
G V+ M +GY+PE + Y ++ E L + RL G A Q L+
Sbjct: 63 FGRAPSDPSVRQM--LGYLPENVMFYPQLSGLETLRHFARLKGA----APEQVERLLEEV 116
Query: 125 GVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILELAK 184
G+ A ++ S G RQR+ A AL+G P LL+LDEPT LDP+ + + L
Sbjct: 117 GLAGAARRRVRTYSKGMRQRLGLAQALLGQPRLLLLDEPTVGLDPIATQDLYQLLDRLRW 176
Query: 185 SGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQG---KVRDLAKIESTDYDVVVSDNEKL 241
G ++ + SH++ +E N ++ G+L+ G ++R+ A + + +S + L
Sbjct: 177 QGTSIILCSHVLPGVEAHINRAAILTRGRLLALGSLARLREDAGLPTLIRASGLSRADWL 236
Query: 242 LKFLRDKIYVREVWEEEGI 260
+ R + + + W EG+
Sbjct: 237 RQHWRSEGHATQGWGAEGV 255
>sp|P26050|NODI_BRAJA NODULATION ATP-BINDING PROTEIN I >gi|281683|pir||S27496 nodI
protein - Bradyrhizobium japonicum
>gi|152117|gb|AAA26229.1| (J03685) nodI gene product
[Bradyrhizobium japonicum]
Length = 306
Score = 127 bits (317), Expect = 1e-28
Identities = 69/219 (31%), Positives = 116/219 (52%)
Query: 1 MPTYIIETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYG 60
M I+ + K FG + +V +L+ V +G +G LGPNGAGK+T +ML G + P G
Sbjct: 3 MSNMAIDLVGVRKSFGDKVIVNDLSFSVARGECFGLLGPNGAGKSTIARMLLGMISPDRG 62
Query: 61 EIKIIGMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQAREL 120
+I ++ +P VG +P+ + T+ E L+ GR G+ L
Sbjct: 63 KITVLDEPVPSRARAARVAVGVVPQFDNLEPEFTVRENLLVFGRYFGMSARTIEAVVPSL 122
Query: 121 MAYTGVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKIL 180
+ + + A ++ LS G ++R+ A AL+ DP LL++DEPT+ LDP R ++
Sbjct: 123 LEFARLESKADVRVSLLSGGMKRRLTLARALINDPHLLVMDEPTTGLDPHARHLIWERLR 182
Query: 181 ELAKSGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGK 219
L GKT+ +++H + E ER+C+ + +++ G I +GK
Sbjct: 183 ALLARGKTILLTTHFMEEAERLCDRLCVLESGCKIAEGK 221
>prf||1914270A nodulation protein [Bradyrhizobium japonicum]
Length = 306
Score = 127 bits (317), Expect = 1e-28
Identities = 69/219 (31%), Positives = 116/219 (52%)
Query: 1 MPTYIIETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYG 60
M I+ + K FG + +V +L+ V +G +G LGPNGAGK+T +ML G + P G
Sbjct: 3 MSNMAIDLVGVRKSFGDKVIVNDLSFSVARGECFGLLGPNGAGKSTIARMLLGMISPDRG 62
Query: 61 EIKIIGMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQAREL 120
+I ++ +P VG +P+ + T+ E L+ GR G+ L
Sbjct: 63 KITVLDEPVPSRARAARVAVGVVPQFDNLEPEFTVRENLLVFGRYFGMSARTIEAVVPSL 122
Query: 121 MAYTGVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKIL 180
+ + + A ++ LS G ++R+ A AL+ DP LL++DEPT+ LDP R ++
Sbjct: 123 LEFARLESKADVRVSLLSGGMKRRLTLARALINDPHLLVMDEPTTGLDPHARHLIWERLR 182
Query: 181 ELAKSGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGK 219
L GKT+ +++H + E ER+C+ + +++ G I +GK
Sbjct: 183 ALLARGKTILLTTHFMEEAERLCDRLCVLESGCKIAEGK 221
>dbj|BAB07698.1| (AP001520) ABC transporter (ATP-binding protein) [Bacillus
halodurans]
Length = 257
Score = 127 bits (317), Expect = 1e-28
Identities = 72/238 (30%), Positives = 129/238 (53%), Gaps = 8/238 (3%)
Query: 6 IETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIKII 65
I K L K F ++V+ ++ V +G ++ LG NGAGKTTT+ +L+ LKP GE I
Sbjct: 6 ISVKRLKKSFKNKDVLKGVDFAVQRGEIFALLGSNGAGKTTTVNILSTLLKPDEGEASIC 65
Query: 66 GMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMAYTG 125
G ++ R+ + +++ + +T E L+ + +L G+P V A L+A
Sbjct: 66 GFDVQRQPDHVRQSISLTGQFAALDGMLTGRENLMIIAKLRGVPNPSQV--ADHLLARFS 123
Query: 126 VGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILELAKS 185
+ A + ++ S G ++R+ A +L+G P ++ LDEPT+ LDP GR+E + ELA
Sbjct: 124 LTDAANRRADQYSGGMKRRLDIAMSLIGKPAVIFLDEPTTGLDPEGRIEVWDAVKELAGG 183
Query: 186 GKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDL------AKIESTDYDVVVSD 237
G T+ +++ + E E++ + + ++ DG++I G + +L AK+E + + D
Sbjct: 184 GTTILLTTQYLEEAEQLADRIAILHDGKIITTGTLAELKEMFPPAKVEYVEKQPTLED 241
>gi|11498611 ABC transporter, ATP-binding protein [Archaeoglobus fulgidus]
>gi|7445743|pir||F69375 ABC transporter, ATP-binding
protein homolog - Archaeoglobus fulgidus
>gi|2649585|gb|AAB90232.1| (AE001034) ABC transporter,
ATP-binding protein [Archaeoglobus fulgidus]
Length = 285
Score = 127 bits (316), Expect = 2e-28
Identities = 75/221 (33%), Positives = 122/221 (54%), Gaps = 16/221 (7%)
Query: 5 IIETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIKI 64
I+E L+ FG V L L V +G + G LGPNG+GKTTTI+ + G + P GEI+
Sbjct: 3 ILEISNLSVRFGDFYAVKGLTLNVRRGEILGLLGPNGSGKTTTIRAIFGMV-PYEGEIR- 60
Query: 65 IGMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMAYT 124
+VG+MP+ Y ++++ E L + L G+ ++ V E++
Sbjct: 61 ----------NYATSVGWMPQNSPLYLNLSVEENLRFFASLYGIEDERRVE---EMLKLV 107
Query: 125 GVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILELAK 184
+ R ++ LS G RQR + A A++ DPELL+LDEPT+ +DP R+ F + +L +
Sbjct: 108 QLERYRKRLVKNLSGGMRQRAMLACAMLHDPELLVLDEPTAGVDPPLRVSFWEQFEKLRE 167
Query: 185 SGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAK 225
GKT+ +++H + E ER C + LI++G I +G ++ +
Sbjct: 168 EGKTILVTTHYMDEAER-CERLVLIRNGSKIAEGTPEEIKR 207
>gb|AAC80570.1| (AF105431) NodI [Bradyrhizobium sp. SNU001]
Length = 305
Score = 127 bits (316), Expect = 2e-28
Identities = 69/219 (31%), Positives = 118/219 (53%), Gaps = 1/219 (0%)
Query: 1 MPTYIIETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYG 60
M I+ + K FG + +V +L+ V +G +G LGPNGAGK+T +ML G + P G
Sbjct: 3 MSNMAIDLVGVRKSFGDKVIVNDLSFSVARGECFGLLGPNGAGKSTIARMLLGMIWPDRG 62
Query: 61 EIKIIGMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQAREL 120
+I ++ +P R + R VG +P+ + T+ E L+ GR G+ L
Sbjct: 63 KITVLDEPVP-SRARARRGVGVVPQFDNLEPEFTVRENLLVFGRYFGMSARTIEAVVPSL 121
Query: 121 MAYTGVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKIL 180
+ + + A ++ L G ++R+ A AL+ DP LL++DEPT+ LDP R ++
Sbjct: 122 LEFARLESKADVRVSLLGGGMKRRLTLARALINDPHLLVMDEPTTGLDPHARHLIWERLR 181
Query: 181 ELAKSGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGK 219
L GKT+ +++H + E ER+C+ + +++ G I +G+
Sbjct: 182 ALLARGKTILLTTHFMEEAERLCDPLCVLESGCKIAEGE 220
>pir||F81183 copper ABC transporter, ATP-binding protein NMB0579 [imported] -
Neisseria meningitidis (group B strain MD58)
>gi|7225807|gb|AAF41007.1| (AE002413) copper ABC
transporter, ATP-binding protein [Neisseria meningitidis
MC58]
Length = 206
Score = 127 bits (316), Expect = 2e-28
Identities = 66/201 (32%), Positives = 113/201 (55%), Gaps = 5/201 (2%)
Query: 1 MPTYIIETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYG 60
M T+ +E +++TK FG + V ++L + G G G NGAGK+T +K++ G + PT G
Sbjct: 1 MTTHHVELRKVTKRFGAQKAVNQVDLVLKAGESVGLAGHNGAGKSTIMKLILGLITPTEG 60
Query: 61 EIKIIGMEM-PRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARE 119
E+ ++G + ++ +GY+PE + + E L + +L K + + Q R
Sbjct: 61 EVMLLGERTGSKAGARLRSQIGYLPETVALHPSLIGIETLDFYAKL----KKQPLTQNRG 116
Query: 120 LMAYTGVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKI 179
L+ G+ + A ++ S G RQR+ A AL+G+P++L+ DEPT+ LDP R F +
Sbjct: 117 LLERVGISQAAHRRVGTYSKGMRQRLALAQALLGEPKVLLFDEPTTGLDPASRQMFYEVV 176
Query: 180 LELAKSGKTVFISSHIVSEIE 200
EL G TV +S+H ++E++
Sbjct: 177 RELNGRGATVLLSTHALAELD 197
>pir||G64435 cobalt transport ATP-binding protein O homolog - Methanococcus
jannaschii >gi|1591732|gb|AAB99089.1| (U67551) cobalt
transport ATP-binding protein (cbiO) [Methanococcus
jannaschii]
Length = 279
Score = 127 bits (315), Expect = 2e-28
Identities = 75/228 (32%), Positives = 127/228 (54%), Gaps = 11/228 (4%)
Query: 4 YIIETKELT-KFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEI 62
YI+ETK+L ++ V+ +N KV KG + LGPNGAGK+T G L+PT GE+
Sbjct: 2 YIVETKDLYFRYPDGTAVLKGINFKVKKGEMVSLLGPNGAGKSTLFLHFNGILRPTKGEV 61
Query: 63 KIIGMEMPRER---VKIMRNVGYMPERPLAYDDM----TIFEFLVYMGRLLGLPKDKAVN 115
I G + ++ V++ + VG + + P DD T+ E + + LGLPK++
Sbjct: 62 LIKGKPIKYDKKSLVEVRKTVGLVFQNP---DDQIFAPTVKEDVAFGPLNLGLPKEEVEK 118
Query: 116 QARELMAYTGVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEF 175
+ +E + G+ LS GQ++RV A L PE+++LDEPT+ LDP+G +
Sbjct: 119 RVKEALKAVGMEGFENKPPHHLSGGQKKRVAIAGILAMQPEVIVLDEPTAGLDPVGASKI 178
Query: 176 IGKILELAKSGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDL 223
+ + +L K G T+ IS+H V + + V ++ DG+++++G +++
Sbjct: 179 MKLLYDLNKKGMTIIISTHDVDLVPVYADKVYVMYDGKILKEGTPKEV 226
>gb|AAG32068.1|AF317790_1 (AF317790) ATP-binding transporter AviABCI [Streptomyces
viridochromogenes]
Length = 323
Score = 127 bits (315), Expect = 2e-28
Identities = 69/224 (30%), Positives = 118/224 (51%)
Query: 11 LTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIKIIGMEMP 70
L K +G + +L VP+G V LGPNGAGKTT +++L+ LKP G + G+++
Sbjct: 14 LRKTYGSETALDGFDLVVPEGTVCALLGPNGAGKTTAVRILSTLLKPDGGRALVAGLDVT 73
Query: 71 RERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMAYTGVGRLA 130
RE ++ RN+G + P + +T E L GRL + + +A + EL+ + A
Sbjct: 74 REAAEVRRNIGVTGQYPAVEEILTGRENLEMWGRLYHVGRREAQRRTEELLEQFDLTEAA 133
Query: 131 FNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILELAKSGKTVF 190
+++ S G R+R+ A+ P++L LDEPT+ LDP R E + + + G TV
Sbjct: 134 DKRLKHYSGGMRRRLDLAAGFFTVPKVLFLDEPTTGLDPRNRNEVWKMVRSMVEQGTTVL 193
Query: 191 ISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAKIESTDYDVV 234
+++ + E +R+ + + +I G+ + +G L + D VV
Sbjct: 194 LTTQYLEEADRLADQISVIDAGRGVVEGTPETLKSLVGGDRIVV 237
>pir||T36064 ABC-type transport system ATP-binding protein - Streptomyces
coelicolor >gi|3928734|emb|CAA22230.1| (AL034355) ABC
transporter ATP-binding protein [Streptomyces coelicolor
A3(2)]
Length = 303
Score = 126 bits (313), Expect = 4e-28
Identities = 75/216 (34%), Positives = 118/216 (53%), Gaps = 6/216 (2%)
Query: 11 LTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIKIIGMEMP 70
++++FG V ++ + + G V G LGPNGAGK+T I M+ G L P+ G + + G +
Sbjct: 9 VSRWFGNVVAVNDITMTIGPG-VTGLLGPNGAGKSTLINMMGGFLAPSTGSVTLDGQPVW 67
Query: 71 RERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMAYTGVGRLA 130
R I +++G +PER YD +T EF++ L GL A E +A +
Sbjct: 68 RNE-DIYKHIGIVPEREAMYDFLTGREFVLANAELHGL----GARAADEALATVEMAYAQ 122
Query: 131 FNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILELAKSGKTVF 190
KI S G RQRV ASAL+ P LL+LDEP + +DP RM+ + + + G+TV
Sbjct: 123 DRKIATYSKGMRQRVKMASALVHQPSLLLLDEPFNGMDPRQRMQLMDLLRRMGDEGRTVL 182
Query: 191 ISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAKI 226
SSHI+ E+E++ ++ +I G+ G R + ++
Sbjct: 183 FSSHILEEVEQLAWHIEVIVAGRHAASGDFRKIRRL 218
>pir||T36764 probable ABC-type transport system ATP-binding protein -
Streptomyces coelicolor >gi|5531452|emb|CAB50957.1|
(AL096849) putative ABC-transporter ATP-binding protein
[Streptomyces coelicolor A3(2)]
Length = 306
Score = 126 bits (313), Expect = 4e-28
Identities = 81/236 (34%), Positives = 124/236 (52%), Gaps = 5/236 (2%)
Query: 6 IETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIKII 65
I + LTK +G+ V +L+ V G V GF GPNGAGKTT +K + G +PT G +
Sbjct: 13 IRVEGLTKRYGRATAVDDLSFTVGTGRVTGFFGPNGAGKTTALKAVVGLARPTAGRAFVR 72
Query: 66 GMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMAYTG 125
G + + R +G E A+ T L + L GLP+ + E++ G
Sbjct: 73 GTPVAALKPDA-RLLGVHIEPCGAHPGRTGRAHLRSLAALAGLPR----RRVGEVLELVG 127
Query: 126 VGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILELAKS 185
+ A ++ + S G RQR+ A+AL+GDPE+L+LDEP + LDP G + E A
Sbjct: 128 LEEAARGRVGKYSMGMRQRLGLAAALLGDPEILVLDEPVNGLDPQGIRWLRTLLRERAAK 187
Query: 186 GKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAKIESTDYDVVVSDNEKL 241
G TV +SSH++ E + + V +I G+L+ +G +RDL + V ++ E+L
Sbjct: 188 GGTVLLSSHMLGEAAQTVDDVVVINRGRLVHEGAIRDLERSGERVVAVRTAEAERL 243
>gb|AAG21390.1|AF302051_4 (AF302051) ABC transporter ATP binding subunit [Bacillus
licheniformis]
Length = 299
Score = 126 bits (313), Expect = 4e-28
Identities = 88/282 (31%), Positives = 141/282 (49%), Gaps = 11/282 (3%)
Query: 5 IIETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIKI 64
++ +TK F ++ V ++ + KG + LGPNGAGKTTTI M+ G LKPT G I +
Sbjct: 4 VVSLTNVTKTFRQKTAVDQIDFSIKKGEIVAILGPNGAGKTTTISMILGLLKPTAGNITL 63
Query: 65 IGMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMAYT 124
MP E+ ++ +G M + + ++ + R PK + + R L T
Sbjct: 64 FD-SMPHEK-RVREKIGTMLQEVSVMPGLRCRVEIIELIRSY-YPKPLSFQKLRTLTGLT 120
Query: 125 GVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILELAK 184
+ + E+LS GQ++R+ FA AL GDPEL+I DEPT +D R F + LA+
Sbjct: 121 D--KDLKTQAEKLSGGQKRRLGFALALAGDPELMIFDEPTVGMDITSRNRFWQTVQSLAE 178
Query: 185 SGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAKIESTDYDVVVSDNEKLLKF 244
GKT+ S+H + E + + L KDG+++ G + S + D E+ L+
Sbjct: 179 QGKTIIFSTHYLQEADDAAQRILLFKDGKIVADGTPLQIKSRISKHSVSFIVDPEQSLEK 238
Query: 245 LRDKIYVREVWEEEGIVRVKLDERFSEKFFLELPAFLASEKL 286
L +++ + RV +D ++K LEL + SEK+
Sbjct: 239 LYQHPETEQIFRKNN--RVYIDTANTDK-ILEL---IFSEKI 274
>pir||T18288 ABC transport protein - slime mold (Dictyostelium discoideum)
(fragment) >gi|1513298|gb|AAB06789.1| (U66526) AbcA
[Dictyostelium discoideum]
Length = 1336
Score = 125 bits (312), Expect = 5e-28
Identities = 68/229 (29%), Positives = 122/229 (52%), Gaps = 4/229 (1%)
Query: 8 TKELTKFFGKRNVVYN---LNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIKI 64
+K TK F + V+ L+L V KG + GFLG NG GK+TTI MLTG L+PT G+ +
Sbjct: 385 SKSYTKLFRPKKTVHAVKYLSLSVEKGTILGFLGSNGCGKSTTIGMLTGLLEPTAGDALV 444
Query: 65 IGMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMAYT 124
G + + R +P+ + + +MT E L L G+P + +Q ++++
Sbjct: 445 YGHSVISNIAAVRRITSVVPQHDILWAEMTAREHLQLFSELKGIPAQERESQIQKVLDQV 504
Query: 125 GVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILELAK 184
+ +++ N I S G ++R+ A A +GDP+++ +DEPT+ +DP + I +++ K
Sbjct: 505 RLSKISNNLISTYSGGMKRRLSVAIACIGDPKIIFMDEPTTGVDPSSKRHLI-DLVKSIK 563
Query: 185 SGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAKIESTDYDV 233
+ K + ++SH + E+E + + + ++ +G + G L Y V
Sbjct: 564 NDKVIILTSHDMHEVEILADKIVIMNEGVMACNGNSLQLKSKYGEGYSV 612
>emb|CAC11998.1| (AL445065) ABC transporter related protein [Thermoplasma
acidophilum]
Length = 334
Score = 125 bits (312), Expect = 5e-28
Identities = 70/216 (32%), Positives = 120/216 (55%), Gaps = 2/216 (0%)
Query: 5 IIETKELTKFF-GKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIK 63
II+T+ LTK + G V LN+++ + +YG LG NGAGKTTTIKMLT A+ PT G
Sbjct: 8 IIKTENLTKIYPGGIKAVDGLNIEIEEAEIYGLLGKNGAGKTTTIKMLTTAIDPTSGNAI 67
Query: 64 IIGMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMAY 123
I G ++ +++ KI R +G +P+ D+ E L + +PK +A + ++L+
Sbjct: 68 IGGYDLRKDKEKIRRIIGVVPQDLTTDADLKGVENLRMIASFYNIPKQEAEQRIKDLLEI 127
Query: 124 TGVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILELA 183
+ + + S G R+R+ L+ P++L LDEPT LD R + I ++
Sbjct: 128 VDLSDWGNKYVSQYSGGMRKRLELICGLVNSPKILFLDEPTLGLDVNTRSKMWKYIRDIQ 187
Query: 184 KS-GKTVFISSHIVSEIERMCNYVGLIKDGQLIEQG 218
K G T+ ++SH + E++++ + + +I G+++ G
Sbjct: 188 KELGVTIILTSHYLEEVDQLADRISIIDHGKILITG 223
>emb|CAB94554.1| (AL359152) putative ABC transporter, ATP-binding subunit
[Streptomyces coelicolor A3(2)]
Length = 260
Score = 125 bits (310), Expect = 8e-28
Identities = 76/219 (34%), Positives = 118/219 (53%), Gaps = 5/219 (2%)
Query: 5 IIETKELTKFFGKRN----VVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYG 60
II T L + F R V ++L V +G + GFLGPNGAGKTTT++MLT L PT G
Sbjct: 3 IISTAGLARTFATRRGPVEAVRGIDLTVREGEILGFLGPNGAGKTTTLRMLTTLLAPTGG 62
Query: 61 EIKIIGMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQAREL 120
+ G ++ + + GY+ + +T+ E LV GRL L + +A +A EL
Sbjct: 63 AATVAGHDLATDPAGVRAACGYVAQSGGVDPQITVREELVTQGRLYRLSRARAAERAGEL 122
Query: 121 MAYTGVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKIL 180
G+ L + LS GQR+R+ A AL P++L LDEPT+ LDP R + +
Sbjct: 123 ARDLGLTGLLDRRCGALSGGQRRRLDIAMALTHRPKVLFLDEPTTGLDPGSRADLWDLVR 182
Query: 181 ELAKS-GKTVFISSHIVSEIERMCNYVGLIKDGQLIEQG 218
L + G TVF+++H + E + + + + ++ G ++ +G
Sbjct: 183 RLRDAHGTTVFLTTHYLDEADALSDRLVVVDGGTVVAEG 221
>pir||A39025 probable membrane protein, cpn60 5'-region - Synechocystis sp. (PCC
6803) >gi|154464|gb|AAA27283.1| (M57517) chaperonin 60
[Synechocystis sp.]
Length = 354
Score = 124 bits (309), Expect = 1e-27
Identities = 83/265 (31%), Positives = 142/265 (53%), Gaps = 20/265 (7%)
Query: 5 IIETKELTKFFG-------KRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKP 57
++ET E++K + K + L++ V +G +G LGPNGAGKTT +K+L G ++
Sbjct: 47 VVETWEISKIYRTGFWMNQKVESLKPLSIAVQQGETFGLLGPNGAGKTTLLKILLGVIRA 106
Query: 58 TYGEIKIIGMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQA 117
+ G ++G + + K + VGY+PE YD +T +EFL Y+G L + K + +
Sbjct: 107 SGGRGTLLGKPIGDRQTK--QRVGYLPENAYFYDFLTAWEFLDYIGSLFQIGKQERQRRI 164
Query: 118 RELMAYTGVGRLAFNK--IEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEF 175
+ G+ + K + + S G QRV A AL+ DPE++ LDEP S LDP G +
Sbjct: 165 LAMCDLVGLAQKTAKKKQLRQYSKGMLQRVGMAQALINDPEVVFLDEPMSGLDPWGATK- 223
Query: 176 IGKILELAKS-GKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAKIESTD--YD 232
GK+ +++ K F + +E++C+ + ++ G+L+ G LA++ D Y+
Sbjct: 224 CGKLFFPSRNRAKPSFSTPTFWRTLEQICDRIAILARGELLCSG---SLAEVLGNDEGYE 280
Query: 233 VVV--SDNEKLLKFLRDKIYVREVW 255
VV+ + E L K+L + ++VW
Sbjct: 281 VVLKGGEEEALGKYLANLSQEQDVW 305
>gb|AAK41557.1| Antibiotic ABC transporter, ATP binding protein [Sulfolobus
solfataricus]
Length = 297
Score = 123 bits (306), Expect = 2e-27
Identities = 81/278 (29%), Positives = 147/278 (52%), Gaps = 13/278 (4%)
Query: 5 IIETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIKI 64
+I + K +G + + N++L+V K +GPNGAGKTT I++L +KP GE++I
Sbjct: 1 MIVVSNIVKKYGNKIALDNVSLEVKKREFVSLIGPNGAGKTTLIRILLTLMKPDRGEVQI 60
Query: 65 IGMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMAYT 124
+G E P + +I + VGY+ E P +T + L ++ G+ K ++ ++ +
Sbjct: 61 LG-ENPFKSKRIFKEVGYVQEIPNYPPFLTGKQVLELSAKIRGVDK----SEVNRVLEFV 115
Query: 125 GVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDP---LGRMEFIGKILE 181
+ A N I + S G QR+ A AL+G+P +LI+DEP +DP L E + K+
Sbjct: 116 EMENYANNPIVKYSKGMVQRIAIAEALLGNPSILIMDEPNMGIDPIFSLKTRELLNKLKR 175
Query: 182 LAKSGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAKIESTDYDVVVSDN--E 239
K ++ ++SH + +++++ + + +I G+++ G V D+ K E VVV + E
Sbjct: 176 --KDNVSILMTSHELEDVKKLSDRIFMIYKGKIVFSGTVEDMVK-EFLGIQVVVETDEIE 232
Query: 240 KLLKFLRDKIYVREVWEEEGIVRVKLDERFSEKFFLEL 277
K L+ YV+ ++ + + KL+E E+ +L
Sbjct: 233 KAEGVLKGIEYVKGIFNDGNRLIAKLNEDRREELLKDL 270
>pir||T36344 probable ABC-type transport system ATP-binding protein -
Streptomyces coelicolor >gi|4808357|emb|CAB42771.1|
(AL049841) putative ABC transporter ATP-binding
component [Streptomyces coelicolor A3(2)]
Length = 315
Score = 123 bits (306), Expect = 2e-27
Identities = 68/226 (30%), Positives = 123/226 (54%), Gaps = 1/226 (0%)
Query: 13 KFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIKIIGMEMPRE 72
K +G ++ + L+L V +G V+G LGPNGAGKTT +++L+ L+P G +++ G ++ E
Sbjct: 15 KEYGSKSALDGLDLTVTRGTVHGVLGPNGAGKTTLVRILSTLLRPDAGRVEVAGHDVVAE 74
Query: 73 RVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMAYTGVGRLAFN 132
+ +G + + +++ + L GRL L A +A EL+ G+
Sbjct: 75 AYAVRLRIGLLGQHAALDEELGGRQNLEMFGRLHHLGARGARARADELLVRFGLSDTGRK 134
Query: 133 KIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILELAKSGKTVFIS 192
+ S G R+R+ A++L+ +PE+L LDEPT+ LDP GR E + L +G TV ++
Sbjct: 135 PVGAYSGGMRRRLDLAASLITEPEVLFLDEPTTGLDPRGRAEVWDSVRSLVGAGTTVLLT 194
Query: 193 SHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAKIESTD-YDVVVSD 237
+ + E +++ + + ++ G+++ G +L D DVV+ D
Sbjct: 195 TQYLEEADQLADRISVVDAGRVVADGTADELKAATGGDRVDVVLRD 240
>dbj|BAB16596.1| (AB037937) ABC2 [Rattus norvegicus]
Length = 2434
Score = 123 bits (306), Expect = 2e-27
Identities = 79/239 (33%), Positives = 129/239 (53%), Gaps = 11/239 (4%)
Query: 5 IIETKELTKFFGKRNV-----VYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTY 59
+++ + LTK + R + V L L V G +G LG NGAGKT+T KMLTG T
Sbjct: 2050 MVKIENLTKVYKSRKIGRILAVDRLCLGVRPGECFGLLGVNGAGKTSTFKMLTGDESTTG 2109
Query: 60 GEIKIIGMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLP-KDKA--VNQ 116
GE + G + ++ +++ +++GY P+ +D++T E L RL G+P KD+A V
Sbjct: 2110 GEAFVNGHSVLKDLLQVQQSLGYCPQFDALFDELTAREHLQLYTRLRGIPWKDEAQVVRW 2169
Query: 117 ARELMAYTGVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFI 176
A E + T + A S G ++++ A AL+G P + LDEPT+ +DP R
Sbjct: 2170 ALEKLELT---KCADKPAGSYSGGNKRKLSTAIALIGYPAFIFLDEPTTGMDPKARRFLW 2226
Query: 177 GKILELAKSGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAKIESTDYDVVV 235
IL+L K+G++V ++SH + E E +C + ++ +G+L G ++ L Y + V
Sbjct: 2227 NLILDLIKTGRSVVLTSHSMEECEAVCTRLAIMVNGRLRCLGSIQHLKNRFGDGYMITV 2285
Score = 114 bits (282), Expect = 2e-24
Identities = 63/212 (29%), Positives = 117/212 (54%), Gaps = 3/212 (1%)
Query: 5 IIETKELTKFF--GKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEI 62
++ +LTK + K+ + L+L + + V FLG NGAGKTTT+ +LTG PT G
Sbjct: 989 VVCVDKLTKVYKNDKKLALNKLSLNLYENQVVSFLGHNGAGKTTTMSILTGLFPPTSGSA 1048
Query: 63 KIIGMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMA 122
I G ++ E +I +N+G P+ + +D +T+ E L + RL + +++ + +++
Sbjct: 1049 TIYGHDIRTEMDEIRKNLGMCPQHNVLFDQLTVEEHLWFYSRLKSMAQEEIRKEMDKMIE 1108
Query: 123 YTGVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILEL 182
+ + ++ LS G ++++ A A +G +ILDEPT+ +DP R IL+
Sbjct: 1109 DLELSNKRHSLVQTLSGGMKRKLSVAIAFVGGSRAIILDEPTAGVDPYARRAIWDLILKY 1168
Query: 183 AKSGKTVFISSHIVSEIERMCNYVGLIKDGQL 214
K G+T+ +S+H + E + + + + +I G+L
Sbjct: 1169 -KPGRTILLSTHHMDEADLLGDRIAIISHGKL 1199
>gb|AAD32038.1|AF093787_6 (AF093787) ABC transporter homolog CylA [Streptococcus agalactiae]
Length = 309
Score = 123 bits (305), Expect = 3e-27
Identities = 84/259 (32%), Positives = 130/259 (49%), Gaps = 4/259 (1%)
Query: 6 IETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIKII 65
I+ K + K +G + ++NL +G YG LGPNGAGKTT L K T G+IK
Sbjct: 3 IKLKNIGKKYGSFEALRDINLIFEEGKFYGLLGPNGAGKTTLFNPLIQNFKQTSGDIKWE 62
Query: 66 GMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMAYTG 125
P R++G + + D++T+ E L+ G L GL K + N+ ++L Y
Sbjct: 63 VDGKPLSIKDFYRHIGIVFQSNRLDDNLTVEENLISRGALYGLSKSQVRNRLKDLQTYLD 122
Query: 126 VGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILEL-AK 184
+ + K LS GQ+++V A AL+ P LL+LDEPT+ LDP R + I +L +
Sbjct: 123 ITAIKKQKYGSLSGGQKRKVDIARALLPQPSLLLLDEPTTGLDPQSRRDLWDAIAQLNQQ 182
Query: 185 SGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAKIESTDYDVVVSDNEKLLKF 244
S TV + +H + E+ C+ + ++ +G + G ++ + ST VV EK L
Sbjct: 183 SQMTVVLITHYLEEMS-ACDVLNVLIEGNIYYSGDIKSFIEQHSTTNLNVVLKPEKSLDQ 241
Query: 245 LRDKIYVR--EVWEEEGIV 261
L +V +V E IV
Sbjct: 242 LSIADFVNKCQVLSEREIV 260
>emb|CAC11779.1| (AL445064) daunorubicin resistance protein related protein
[Thermoplasma acidophilum]
Length = 327
Score = 123 bits (305), Expect = 3e-27
Identities = 68/234 (29%), Positives = 130/234 (55%), Gaps = 2/234 (0%)
Query: 7 ETKELTKFFGK-RNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIKII 65
E +++K + K + + +++ ++P V+ +G NGAGKTT +++L L PT G++ I
Sbjct: 28 ECIDVSKTYAKGQTALRSVSFEIPMHGVFSLIGRNGAGKTTLVRILATELMPTSGKVFID 87
Query: 66 GMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMAYTG 125
+++ RE I R + +P+ A +T + + G+ +A +A+E++A G
Sbjct: 88 DIDIIREPDSIRRRIAIIPQEARAISWLTPMQTVTTFLLYRGIRYSEAKARAKEVLADLG 147
Query: 126 VGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILELAKS 185
+ +A LS GQ+++VL A+ + D ++L +DEPT+ LDP+ R E + IL K
Sbjct: 148 LASVADRMNRMLSGGQKRKVLVAALVASDADILFMDEPTTGLDPISRSE-LWDILSDLKK 206
Query: 186 GKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAKIESTDYDVVVSDNE 239
K +F+++H + E ER+ + +G++ G++ G + DL + Y + + D E
Sbjct: 207 EKFIFLTTHYLEEAERLSDRIGILDQGEMKAIGTMSDLRSMVPKKYSISLVDKE 260
>pir||F82303 ABC transporter, ATP-binding protein VC0589 [imported] - Vibrio
cholerae (group O1 strain N16961)
>gi|9655020|gb|AAF93756.1| (AE004144) ABC transporter,
ATP-binding protein [Vibrio cholerae]
Length = 305
Score = 122 bits (304), Expect = 4e-27
Identities = 64/221 (28%), Positives = 122/221 (54%), Gaps = 1/221 (0%)
Query: 4 YIIETKELTKFF-GKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEI 62
Y +E ++L K + G + ++L+V KG Y LGPNGAGK+TTI +++ + T G++
Sbjct: 2 YALEIEQLRKTYAGGFEALKGISLQVKKGDFYALLGPNGAGKSTTIGIISSLVNKTSGKV 61
Query: 63 KIIGMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMA 122
+ G ++ + + +G +P+ T+ + ++ G+PK A +A++ +
Sbjct: 62 TVFGYDLDSQLELAKQKLGLVPQEFNFNPFETVEQIVLQQAGYYGVPKALAKERAKKYLT 121
Query: 123 YTGVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILEL 182
+ + LS G ++R++ A ALM +P+LLILDEPT+ +D R + ++
Sbjct: 122 QLDLWEKRSERARNLSGGMKRRLMIARALMHEPQLLILDEPTAGVDIELRRSMWEFLKQI 181
Query: 183 AKSGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDL 223
G T+ +++H + E E +C ++G+I+ G+LIE ++ L
Sbjct: 182 NAQGVTIILTTHYLEEAEMLCRHIGIIQRGELIENTTMKSL 222
>gb|AAK42130.1| Antibiotic ABC transporter ATP binding protein [Sulfolobus
solfataricus]
Length = 297
Score = 122 bits (303), Expect = 6e-27
Identities = 79/278 (28%), Positives = 148/278 (52%), Gaps = 13/278 (4%)
Query: 5 IIETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIKI 64
+I + K +G + + N++L+V KG +GPNGAGKTT I++L +KP GE++I
Sbjct: 1 MIVVSSIVKKYGNKIALDNISLEVKKGEFVSLIGPNGAGKTTLIRILLTLMKPDKGEVQI 60
Query: 65 IGMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMAYT 124
+G E P +I + +GY+ E P +T + L ++ G+ K ++ + ++ +
Sbjct: 61 LG-ENPFRNKRIFKAIGYVQEIPNYPPFLTGRQVLELSAKIRGVDK----SEVKRVLEFV 115
Query: 125 GVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDP---LGRMEFIGKILE 181
+ A + I + S G QR+ A +L+G+P +LI+DEP +DP L E + K+
Sbjct: 116 EMENYANSPIIKYSKGMVQRIAIAESLLGNPSILIMDEPNMGIDPIFSLKTRELLNKLKR 175
Query: 182 LAKSGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAKIESTDYDVVVSDN--E 239
K ++ ++SH + +++++ + + +I G+++ G V D+ K E V+V + E
Sbjct: 176 --KDNVSILMTSHELEDVKKLSDRIFMIYKGKIVFSGTVEDMIK-EFLGIQVIVETDEIE 232
Query: 240 KLLKFLRDKIYVREVWEEEGIVRVKLDERFSEKFFLEL 277
+ L+ YV+ V+ + + VKL+E E +L
Sbjct: 233 NAEEALKGIEYVKGVFNDGNRLIVKLNEDRREDLLRDL 270
>pir||A70039 ABC transporter (ATP-binding protein) homolog yvfR - Bacillus
subtilis >gi|1945718|emb|CAB08012.1| (Z94043)
hypothetical protein [Bacillus subtilis]
>gi|2635922|emb|CAB15414.1| (Z99121) similar to ABC
transporter (ATP-binding protein) [Bacillus subtilis]
Length = 301
Score = 122 bits (303), Expect = 6e-27
Identities = 78/243 (32%), Positives = 124/243 (50%), Gaps = 19/243 (7%)
Query: 6 IETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIKII 65
+ +TK F ++ V N++ + KG + LGPNGAGKTT + M+ G LKP+ GEIK+
Sbjct: 6 VTVSNVTKHFQRKTAVNNISFSIEKGEIAAILGPNGAGKTTVVSMILGLLKPSEGEIKLF 65
Query: 66 GM----EMPRERVKIM-RNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQAREL 120
+ RE++ +M + V MP + D + F Y L + +EL
Sbjct: 66 NRVPDDQQVREKIGVMLQEVSVMPGLKV---DEILELFRSYYPNPLSM---------KEL 113
Query: 121 MAYTGVGRLAFN-KIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKI 179
++ T + + + E+LS GQ++R+ FA AL G+PELLILDEPT +D R F I
Sbjct: 114 VSLTALTKEDLKTRAEKLSGGQKRRLSFALALAGNPELLILDEPTVGMDTSSRHRFWQTI 173
Query: 180 LELAKSGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDL-AKIESTDYDVVVSDN 238
L+ GKT+ S+H + E + + +GQL+ G + ++I+ + +
Sbjct: 174 HGLSDQGKTIIFSTHYLQEADDAAQRILFFTEGQLVADGSPMQIRSRIQKQSVSFTLHSS 233
Query: 239 EKL 241
E L
Sbjct: 234 ESL 236
>sp|P36879|YADG_ECOLI HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PROTEIN YADG
>gi|628771|pir||S45204 probable ABC-type transport
protein yagD - Escherichia coli
>gi|473794|dbj|BAA05583.1| (D26562) 'ORF' [Escherichia
coli] >gi|1786319|gb|AAC73238.1| (AE000122) putative
ATP-binding component of a transport system [Escherichia
coli K12]
Length = 308
Score = 122 bits (302), Expect = 7e-27
Identities = 69/243 (28%), Positives = 132/243 (53%), Gaps = 2/243 (0%)
Query: 3 TYIIETKELTKFF-GKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGE 61
T +E ++L K + G + ++L+V G Y LGPNGAGK+TTI +++ + T G
Sbjct: 2 TIALELQQLKKTYPGGVQALRGIDLQVEAGDFYALLGPNGAGKSTTIGIISSLVNKTSGR 61
Query: 62 IKIIGMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELM 121
+ + G ++ ++ V R +G +P+ T+ + +V G+ + +A ++ + +
Sbjct: 62 VSVFGYDLEKDVVNAKRQLGLVPQEFNFNPFETVQQIVVNQAGYYGVERKEAYIRSEKYL 121
Query: 122 AYTGVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILE 181
+ + LS G ++R++ A ALM +P+LLILDEPT+ +D R G + +
Sbjct: 122 KQLDLWGKRNERARMLSGGMKRRLMIARALMHEPKLLILDEPTAGVDIELRRSMWGFLKD 181
Query: 182 LAKSGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRD-LAKIESTDYDVVVSDNEK 240
L G T+ +++H + E E +C +G+I+ G+L+E ++ LAK++S + + ++
Sbjct: 182 LNDKGTTIILTTHYLEEAEMLCRNIGIIQHGELVENTSMKALLAKLKSETFILDLAPKSP 241
Query: 241 LLK 243
L K
Sbjct: 242 LPK 244
>gi|11499564 ABC transporter, ATP-binding protein [Archaeoglobus fulgidus]
>gi|7445711|pir||E69497 ABC transporter, ATP-binding
protein homolog - Archaeoglobus fulgidus
>gi|2648557|gb|AAB89272.1| (AE000966) ABC transporter,
ATP-binding protein [Archaeoglobus fulgidus]
Length = 253
Score = 122 bits (302), Expect = 7e-27
Identities = 71/224 (31%), Positives = 122/224 (53%), Gaps = 1/224 (0%)
Query: 5 IIETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIKI 64
+IE +++ + V+ +LNL + +G LGPNGAGK+T ++++ G LKPT G +K+
Sbjct: 3 VIEFYDVSFSYNSSEVLSDLNLGIGRGEFVAVLGPNGAGKSTMLRLILGLLKPTKGTVKV 62
Query: 65 IGMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMAYT 124
+G ER K + VGY+P+R + + V LL K ++ RE ++
Sbjct: 63 LGYNAFDERDKFVGRVGYLPQREEILLEAPLTVSQVIKLPLLARGKKVGDSKLREALSMV 122
Query: 125 GVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILELAK 184
G+ ELS GQ+Q+VL A AL+ DPE+L+LDEP + +D + + + + E++
Sbjct: 123 GLDGFGDKLFSELSGGQQQKVLLARALISDPEILLLDEPFNGVDVPSQEKIVEVLAEMSS 182
Query: 185 SGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAKIES 228
GKTV H ++ + + V L+ + ++I GK ++ E+
Sbjct: 183 KGKTVVAVVHNINPLLHNIDRVVLL-NRRIIAAGKPNEVFSEEN 225
>gi|11498739 ABC transporter, ATP-binding protein [Archaeoglobus fulgidus]
>gi|7445636|pir||B69392 ABC transporter, ATP-binding
protein homolog - Archaeoglobus fulgidus
>gi|2649450|gb|AAB90106.1| (AE001025) ABC transporter,
ATP-binding protein [Archaeoglobus fulgidus]
Length = 232
Score = 121 bits (301), Expect = 1e-26
Identities = 70/223 (31%), Positives = 123/223 (54%), Gaps = 12/223 (5%)
Query: 28 VPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIKIIGMEMPRERVKIMRNVGYMPERP 87
V + + G LGPNG+GK+T +K++ G + P G++ + G+ + +K+ VG++PE P
Sbjct: 8 VAENEILGLLGPNGSGKSTLMKIIAGVIPPDEGDVIVNGVSVAENPLKVKELVGFVPETP 67
Query: 88 LAYDDMTIFEFLVYMGRLLGLPKD---KAVNQARELMAYTGVGRLAFNKIEELSSGQRQR 144
+ Y+ +T E ++G + + + V + E + +T + L N LS G RQ+
Sbjct: 68 VLYESLTASELFSFVGAVRKIESSLLKERVERLAEALEFTAMDELFAN----LSLGNRQK 123
Query: 145 VLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILELAKSGKTVFISSHIVSEIERMCN 204
V +A++ +P +LILDE + LD F I + + G+ V +S+HI+ ER+C+
Sbjct: 124 VSIIAAMLHNPSVLILDEAFNGLDVASAKVFRDLIFQFREEGREVILSTHIMPIAERICD 183
Query: 205 YVGLIKDGQLIEQGKVRDLAKIESTDYDVVVSDNEKLLKFLRD 247
+ +I++G++I QG +L K E + DV + KL K RD
Sbjct: 184 RILIIQNGRIIAQGTPDELKKDEDLE-DVFL----KLTKIERD 221
>pir||T07713 probable ABC-type transport protein T23J7.70 - Arabidopsis thaliana
>gi|4741191|emb|CAB41857.1| (AL049746) ABC
transporter-like protein [Arabidopsis thaliana]
Length = 925
Score = 121 bits (301), Expect = 1e-26
Identities = 79/267 (29%), Positives = 150/267 (55%), Gaps = 13/267 (4%)
Query: 18 RNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIKIIGMEMPRERVKIM 77
+ V L+L VP G +G LGPNGAGKT+ I M+TG +KPT G + G+++ ++ ++
Sbjct: 621 KKAVRVLSLAVPSGECFGMLGPNGAGKTSFINMMTGLVKPTSGAAFVQGLDICKDMDRVY 680
Query: 78 RNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQA-RELMAYTGV--GRLAFNKI 134
++G P+ L ++ +T E L++ GRL L K +NQA E + + G +A
Sbjct: 681 TSMGVCPQHDLLWETLTGREHLLFYGRLKNL-KGVDLNQAVEESLRSVNLFHGGVADKPA 739
Query: 135 EELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILELAKSGKTVFISSH 194
+ S G ++R+ A +L+G+P+++ +DEP++ LDP R + +++ AK + +++H
Sbjct: 740 GKYSGGMKRRLSVAISLIGNPKVVYMDEPSTGLDPASRKN-LWTVIKNAKRHTAIILTTH 798
Query: 195 IVSEIERMCNYVGLIKDGQLIEQGKVRDLAKIESTDYDVVV---SDNEKLLKFLRDKI-- 249
+ E E +C+ +G+ DG+L G ++L Y + + S++EK ++ L ++
Sbjct: 799 SMEEAEFLCDRLGIFVDGRLQCIGNPKELKGRYGGSYVLTMTTSSEHEKDVEMLVQEVSP 858
Query: 250 YVREVWEEEGIVRVKL---DERFSEKF 273
V++++ G + ++ + R SE F
Sbjct: 859 NVKKIYHIAGTQKFEIPKDEVRISEVF 885
>pir||A59189 ATP-binding cassette transporter - human (fragment)
>gi|5689461|dbj|BAA83014.1| (AB028985) KIAA1062 protein
[Homo sapiens]
Length = 1529
Score = 121 bits (301), Expect = 1e-26
Identities = 79/239 (33%), Positives = 128/239 (53%), Gaps = 11/239 (4%)
Query: 5 IIETKELTKFFGKRNV-----VYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTY 59
+++ + LTK + R + V L L V G +G LG NGAGKT+T KMLTG T
Sbjct: 1143 MVKIENLTKVYKSRKIGRILAVDRLCLGVRPGECFGLLGVNGAGKTSTFKMLTGDESTTG 1202
Query: 60 GEIKIIGMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLP-KDKA--VNQ 116
GE + G + +E +++ +++GY P+ +D++T E L RL G+ KD+A V
Sbjct: 1203 GEAFVNGHSVLKELLQVQQSLGYCPQCDALFDELTAREHLQLYTRLRGISWKDEARVVKW 1262
Query: 117 ARELMAYTGVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFI 176
A E + T + A S G ++++ A AL+G P + LDEPT+ +DP R
Sbjct: 1263 ALEKLELT---KYADKPAGTYSGGNKRKLSTAIALIGYPAFIFLDEPTTGMDPKARRFLW 1319
Query: 177 GKILELAKSGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAKIESTDYDVVV 235
IL+L K+G++V ++SH + E E +C + ++ +G+L G ++ L Y + V
Sbjct: 1320 NLILDLIKTGRSVVLTSHSMEECEALCTRLAIMVNGRLRCLGSIQHLKNRFGDGYMITV 1378
Score = 113 bits (280), Expect = 3e-24
Identities = 63/212 (29%), Positives = 117/212 (54%), Gaps = 3/212 (1%)
Query: 5 IIETKELTKFF--GKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEI 62
++ +LTK + K+ + L+L + + V FLG NGAGKTTT+ +LTG PT G
Sbjct: 83 VVCVDKLTKVYKDDKKLALNKLSLNLYENQVVSFLGHNGAGKTTTMSILTGLFPPTSGSA 142
Query: 63 KIIGMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMA 122
I G ++ E +I +N+G P+ + +D +T+ E L + RL + +++ + +++
Sbjct: 143 TIYGHDIRTEMDEIRKNLGMCPQHNVLFDRLTVEEHLWFYSRLKSMAQEEIRREMDKMIE 202
Query: 123 YTGVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILEL 182
+ + ++ LS G ++++ A A +G +ILDEPT+ +DP R IL+
Sbjct: 203 DLELSNKRHSLVQTLSGGMKRKLSVAIAFVGGSRAIILDEPTAGVDPYARRAIWDLILKY 262
Query: 183 AKSGKTVFISSHIVSEIERMCNYVGLIKDGQL 214
K G+T+ +S+H + E + + + + +I G+L
Sbjct: 263 -KPGRTILLSTHHMDEADLLGDRIAIISHGKL 293
>gb|AAG09372.1|AF178941_1 (AF178941) ATP-binding cassette sub-family A member 2 [Homo sapiens]
Length = 2436
Score = 121 bits (301), Expect = 1e-26
Identities = 79/239 (33%), Positives = 128/239 (53%), Gaps = 11/239 (4%)
Query: 5 IIETKELTKFFGKRNV-----VYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTY 59
+++ + LTK + R + V L L V G +G LG NGAGKT+T KMLTG T
Sbjct: 2050 MVKIENLTKVYKSRKIGRILAVDRLCLGVRPGECFGLLGVNGAGKTSTFKMLTGDESTTG 2109
Query: 60 GEIKIIGMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLP-KDKA--VNQ 116
GE + G + +E +++ +++GY P+ +D++T E L RL G+ KD+A V
Sbjct: 2110 GEAFVNGHSVLKELLQVQQSLGYCPQCDALFDELTAREHLQLYTRLRGISWKDEARVVKW 2169
Query: 117 ARELMAYTGVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFI 176
A E + T + A S G ++++ A AL+G P + LDEPT+ +DP R
Sbjct: 2170 ALEKLELT---KYADKPAGTYSGGNKRKLSTAIALIGYPAFIFLDEPTTGMDPKARRFLW 2226
Query: 177 GKILELAKSGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAKIESTDYDVVV 235
IL+L K+G++V ++SH + E E +C + ++ +G+L G ++ L Y + V
Sbjct: 2227 NLILDLIKTGRSVVLTSHSMEECEALCTRLAIMVNGRLRCLGSIQHLKNRFGDGYMITV 2285
Score = 113 bits (280), Expect = 3e-24
Identities = 63/212 (29%), Positives = 117/212 (54%), Gaps = 3/212 (1%)
Query: 5 IIETKELTKFF--GKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEI 62
++ +LTK + K+ + L+L + + V FLG NGAGKTTT+ +LTG PT G
Sbjct: 990 VVCVDKLTKVYKDDKKLALNKLSLNLYENQVVSFLGHNGAGKTTTMSILTGLFPPTSGSA 1049
Query: 63 KIIGMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMA 122
I G ++ E +I +N+G P+ + +D +T+ E L + RL + +++ + +++
Sbjct: 1050 TIYGHDIRTEMDEIRKNLGMCPQHNVLFDRLTVEEHLWFYSRLKSMAQEEIRREMDKMIE 1109
Query: 123 YTGVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILEL 182
+ + ++ LS G ++++ A A +G +ILDEPT+ +DP R IL+
Sbjct: 1110 DLELSNKRHSLVQTLSGGMKRKLSVAIAFVGGSRAIILDEPTAGVDPYARRAIWDLILKY 1169
Query: 183 AKSGKTVFISSHIVSEIERMCNYVGLIKDGQL 214
K G+T+ +S+H + E + + + + +I G+L
Sbjct: 1170 -KPGRTILLSTHHMDEADLLGDRIAIISHGKL 1200
>dbj|BAB04371.1| (AP001509) ABC transporter (ATP-binding protein) [Bacillus
halodurans]
Length = 288
Score = 121 bits (300), Expect = 1e-26
Identities = 76/247 (30%), Positives = 129/247 (51%), Gaps = 12/247 (4%)
Query: 5 IIETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIKI 64
I+E +TK F K + ++L+V KG V GF+G NGAGK+TTIKM+ LKP GE+K+
Sbjct: 4 IVELINVTKTF-KDFSINKMDLQVKKGFVTGFIGANGAGKSTTIKMMMNLLKPDDGEVKL 62
Query: 65 IGMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMAYT 124
GM+ I +G++ + + ++ + + + +G D Q Y
Sbjct: 63 FGMDYTTHEKAIKERIGFVYDGNVFFEGLNLKDIKHIVGPAYKRWDDTLFYQ------YV 116
Query: 125 GVGRLAFNK-IEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILEL- 182
L NK I+ S G + + A AL EL+I+DEPT+ LDP+ R E + + EL
Sbjct: 117 DKFELPLNKAIKTFSKGMQMKASLAIALSHHAELIIMDEPTAGLDPIFRRELLDILQELM 176
Query: 183 AKSGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAK---IESTDYDVVVSDNE 239
+ +T+F S+HI ++++R+ +Y+ ++ G L+ + D+ + + D++ D E
Sbjct: 177 IDNDRTIFFSTHITTDLDRIADYIAFMQGGNLVFNQSIHDIDENYALVKGGLDLLDKDTE 236
Query: 240 KLLKFLR 246
K +R
Sbjct: 237 KAFVHVR 243
>sp|Q45460|OPBA_BACSU CHOLINE TRANSPORT ATP-BINDING PROTEIN OPUBA >gi|7442619|pir||G69669
choline ABC transporter (ATP-binding protein) opuBA -
Bacillus subtilis >gi|2293447|gb|AAC14356.1| (AF008930)
ATPase [Bacillus subtilis] >gi|2635886|emb|CAB15378.1|
(Z99121) choline ABC transporter (ATP-binding protein)
[Bacillus subtilis]
Length = 381
Score = 120 bits (298), Expect = 2e-26
Identities = 70/231 (30%), Positives = 132/231 (56%), Gaps = 3/231 (1%)
Query: 16 GKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIKIIGME-MPRERV 74
G + V N+NLK+ KG F+GP+G GKTTT+KM+ ++P+ G+I I G M ++ V
Sbjct: 13 GGKKAVNNVNLKIAKGEFICFIGPSGCGKTTTMKMINRLIEPSAGKIFIDGENIMDQDPV 72
Query: 75 KIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMAYTGVGRLAFNKI 134
++ R +GY+ ++ + MTI + + + +LL P+ + +AREL+ +G ++
Sbjct: 73 ELRRKIGYVIQQIGLFPHMTIQQNISLVPKLLKWPEQQRKERARELLKLVDMGPEYVDRY 132
Query: 135 -EELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILELAKS-GKTVFIS 192
ELS GQ+QR+ AL +P L+++DEP LDP+ R + +L K+ KT+
Sbjct: 133 PHELSGGQQQRIGVLRALAAEPPLILMDEPFGALDPITRDSLQEEFKKLQKTLHKTIVFV 192
Query: 193 SHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAKIESTDYDVVVSDNEKLLK 243
+H + E ++ + + ++K G++++ G D+ + + ++ E+L++
Sbjct: 193 THDMDEAIKLADRIVILKAGEIVQVGTPDDILRNPADEFVEEFIGKERLIQ 243
>gb|AAD09159.1| (AF047429) putative ATP/GTP binding protein NosF [Achromobacter
cycloclastes] >gi|4127274|emb|CAA75427.1| (Y15161)
cytoplasmic protein [Achromobacter cycloclastes]
Length = 299
Score = 120 bits (298), Expect = 2e-26
Identities = 76/223 (34%), Positives = 117/223 (52%), Gaps = 10/223 (4%)
Query: 3 TYIIETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEI 62
T + LTK F + +++L + G LG NGAGK+T +K++ G + GE+
Sbjct: 2 TPTLTISRLTKRFQSVEALKSVSLALEPGRRAALLGHNGAGKSTMMKIVLGLIPFDSGEV 61
Query: 63 KIIGME--MPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQAREL 120
+ G P R + V Y+PE + +T E L + L G + QA EL
Sbjct: 62 SVCGSAPGSPAARTQ----VAYLPENVAFHPALTGEEQLRHYLALRG----ENPKQATEL 113
Query: 121 MAYTGVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKIL 180
+A G+G A +I S G RQRV A L+G P LL+LDEPTS LDP+ R +F +
Sbjct: 114 LARVGLGHAARRRIGTYSKGMRQRVGLAQTLIGRPRLLVLDEPTSGLDPVSRRDFYDLLD 173
Query: 181 ELAKSGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDL 223
LA G + +SSH+++E+E + + ++ G+L+ +G + DL
Sbjct: 174 GLAAEGTAILLSSHVLTEVEARTDSILILSGGELVAEGTLADL 216
>gb|AAK43187.1| ABC transporter, ATP binding protein, putative [Sulfolobus
solfataricus]
Length = 291
Score = 120 bits (297), Expect = 3e-26
Identities = 80/246 (32%), Positives = 130/246 (52%), Gaps = 7/246 (2%)
Query: 5 IIETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIKI 64
+I+ LTK +G V++ L + + ++ +GPNGAGK+T +K++ G + T G I +
Sbjct: 3 VIDAINLTKRYGDIEVLHGLTFSIEEKSITLVIGPNGAGKSTLLKIIGGLINRTSGYISV 62
Query: 65 IGMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMAYT 124
+G E P KI R VG + +RP +T+ + + + P ++ A+ L+
Sbjct: 63 LG-EDPWNSNKIPRKVGIILDRPFLPPYLTVIDIVKEVSSEFSYP----LSDAKRLLEDF 117
Query: 125 GVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILEL-A 183
+ NK+ ELS+G +Q++ +L+ +PE++I DEPT+NLD R E L
Sbjct: 118 NLVHFMKNKVRELSAGTKQKLQIVFSLIKNPEIIIADEPTANLDITSRYEVYNTFAVLRE 177
Query: 184 KSGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAKIESTDYDVVVSDN-EKLL 242
K G TV ISSHI +EI +V I +G + GKV L + + +V DN K L
Sbjct: 178 KMGLTVLISSHIPAEILAFSTHVLAINNGIMKFFGKVDKLLRNNFLEEFYIVVDNIGKAL 237
Query: 243 KFLRDK 248
+ L+D+
Sbjct: 238 EALKDR 243
>gb|AAD44229.1|AF143772_35 (AF143772) DrrA [Mycobacterium avium]
Length = 315
Score = 120 bits (297), Expect = 3e-26
Identities = 77/234 (32%), Positives = 120/234 (50%), Gaps = 1/234 (0%)
Query: 6 IETKELTKFFGKRNVVY-NLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIKI 64
IE + LTK FG V ++ VP G V G LG NGAGKTTTI +L+ ++PT G +
Sbjct: 6 IEVEGLTKKFGGSTVALAGVDFSVPAGTVCGLLGHNGAGKTTTINILSTLIRPTSGRASV 65
Query: 65 IGMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMAYT 124
G ++ R ++ ++G + +T E LV RL GL + +A +A EL+
Sbjct: 66 AGHDVVRRPAEVRASIGMAGQFTGLDPMLTGRENLVLFSRLRGLNRRRAKARADELLEQF 125
Query: 125 GVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILELAK 184
+ A ++ S G +RV ASAL+ P++L LDEPT+ LDP R + + L
Sbjct: 126 NLVDAADRRLSTYSGGMFRRVDLASALVVPPKVLFLDEPTTGLDPRSRRDVWALVSSLRV 185
Query: 185 SGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAKIESTDYDVVVSDN 238
G TV +++ + E + + + + +I G++I G +L + T Y V N
Sbjct: 186 QGITVLLTTQYLEEADVLSDSIVVIDHGRVIASGTSEELKRAVGTSYCQVTPAN 239
>pir||S60124 transport protein homolog C48B4.4 - Caenorhabditis elegans
Length = 1767
Score = 119 bits (296), Expect = 4e-26
Identities = 88/314 (28%), Positives = 155/314 (49%), Gaps = 23/314 (7%)
Query: 21 VYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIKIIGMEMPRERVKIMRNV 80
V L+L+ +G LG NGAGK+TT + G ++PT G I I G ++ E + R++
Sbjct: 628 VDGLSLRAVRGQCSILLGHNGAGKSTTFSSIAGIIRPTNGRITICGYDVGNEPGETRRHI 687
Query: 81 GYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMAYTGVGRLAFNKIEELSSG 140
G P+ YD +T+ E L + L G + + L++ + K LS G
Sbjct: 688 GMCPQYNPLYDQLTVSEHLKLVYGLKGAREKDFKQDMKRLLSDVKLDFKENEKAVNLSGG 747
Query: 141 QRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILELAKSGKTVFISSHIVSEIE 200
++++ AL+GD E+++LDEPT+ +DP G + + K++E K+ +T+ +++H + E E
Sbjct: 748 MKRKLCVCMALIGDSEVVLLDEPTAGMDP-GARQDVQKLVEREKANRTILLTTHYMDEAE 806
Query: 201 RMCNYVGLIKDGQLIEQGKVRDLAKIESTDYDVVV-----SDNEKLLKFLRDKI--YVRE 253
R+ ++V ++ G+L+ G + L + T Y + V D K+ L D YV+E
Sbjct: 807 RLGDWVFIMSHGKLVASGTNQYLKQKFGTGYLLTVVLDHNGDKRKMAVILTDVCTHYVKE 866
Query: 254 VWEEE---GIVRVKLDERFSEKFFLELPAFLASEKLAIKLFK-------PHT--SPLERI 301
E + + L E ++F +P F A E + + ++ P+T S L +
Sbjct: 867 AERGEMHGQQIEIILPEARKKEF---VPLFQALEAIQDRNYRSNVFDNMPNTLKSQLATL 923
Query: 302 LMKRFNMGWKNGEQ 315
M+ F + EQ
Sbjct: 924 EMRSFGLSLNTLEQ 937
Score = 108 bits (268), Expect = 7e-23
Identities = 71/229 (31%), Positives = 118/229 (51%), Gaps = 8/229 (3%)
Query: 9 KELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIKIIGME 68
K+LTK FG+ V L L V + +G LG NGAGKTTT +LTG + GE I G +
Sbjct: 1445 KDLTKTFGRFTAVNELCLAVDQKECFGLLGVNGAGKTTTFNILTGQSFASSGEAMIGGRD 1504
Query: 69 MPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMAYTGVGR 128
V + ++GY P+ D+T E L + ++ G KA +A ++ G+
Sbjct: 1505 -----VTELISIGYCPQFDALMLDLTGRESLEILAQMHGFENYKA--KAELILECVGMIA 1557
Query: 129 LAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILELAK-SGK 187
A + S GQ++++ AL+ +++ILDEPT+ +DP R E +L + S
Sbjct: 1558 HADKLVRFYSGGQKRKISVGVALLAPTQMIILDEPTAGIDPKARREVWELLLWCREHSNS 1617
Query: 188 TVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAKIESTDYDVVVS 236
+ ++SH + E E +C+ + ++ G LI G ++L + +Y + +S
Sbjct: 1618 ALMLTSHSMDECEALCSRIAVLNRGSLIAIGSSQELKSLYGNNYTMTLS 1666
>pir||T42749 ATP-binding cassette transport protein homolog - Caenorhabditis
elegans >gi|3172341|gb|AAC24116.1| (AF049142)
ATP-binding cassette transporter [Caenorhabditis
elegans]
Length = 1704
Score = 119 bits (296), Expect = 4e-26
Identities = 88/314 (28%), Positives = 155/314 (49%), Gaps = 23/314 (7%)
Query: 21 VYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIKIIGMEMPRERVKIMRNV 80
V L+L+ +G LG NGAGK+TT + G ++PT G I I G ++ E + R++
Sbjct: 563 VDGLSLRAVRGQCSILLGHNGAGKSTTFSSIAGIIRPTNGRITICGYDVGNEPGETRRHI 622
Query: 81 GYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMAYTGVGRLAFNKIEELSSG 140
G P+ YD +T+ E L + L G + + L++ + K LS G
Sbjct: 623 GMCPQYNPLYDQLTVSEHLKLVYGLKGAREKDFKQDMKRLLSDVKLDFKENEKAVNLSGG 682
Query: 141 QRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILELAKSGKTVFISSHIVSEIE 200
++++ AL+GD E+++LDEPT+ +DP G + + K++E K+ +T+ +++H + E E
Sbjct: 683 MKRKLCVCMALIGDSEVVLLDEPTAGMDP-GARQDVQKLVEREKANRTILLTTHYMDEAE 741
Query: 201 RMCNYVGLIKDGQLIEQGKVRDLAKIESTDYDVVV-----SDNEKLLKFLRDKI--YVRE 253
R+ ++V ++ G+L+ G + L + T Y + V D K+ L D YV+E
Sbjct: 742 RLGDWVFIMSHGKLVASGTNQYLKQKFGTGYLLTVVLDHNGDKRKMAVILTDVCTHYVKE 801
Query: 254 VWEEE---GIVRVKLDERFSEKFFLELPAFLASEKLAIKLFK-------PHT--SPLERI 301
E + + L E ++F +P F A E + + ++ P+T S L +
Sbjct: 802 AERGEMHGQQIEIILPEARKKEF---VPLFQALEAIQDRNYRSNVFDNMPNTLKSQLATL 858
Query: 302 LMKRFNMGWKNGEQ 315
M+ F + EQ
Sbjct: 859 EMRSFGLSLNTLEQ 872
Score = 108 bits (268), Expect = 7e-23
Identities = 71/229 (31%), Positives = 118/229 (51%), Gaps = 8/229 (3%)
Query: 9 KELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIKIIGME 68
K+LTK FG+ V L L V + +G LG NGAGKTTT +LTG + GE I G +
Sbjct: 1382 KDLTKTFGRFTAVNELCLAVDQKECFGLLGVNGAGKTTTFNILTGQSFASSGEAMIGGRD 1441
Query: 69 MPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMAYTGVGR 128
V + ++GY P+ D+T E L + ++ G KA +A ++ G+
Sbjct: 1442 -----VTELISIGYCPQFDALMLDLTGRESLEILAQMHGFENYKA--KAELILECVGMIA 1494
Query: 129 LAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILELAK-SGK 187
A + S GQ++++ AL+ +++ILDEPT+ +DP R E +L + S
Sbjct: 1495 HADKLVRFYSGGQKRKISVGVALLAPTQMIILDEPTAGIDPKARREVWELLLWCREHSNS 1554
Query: 188 TVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAKIESTDYDVVVS 236
+ ++SH + E E +C+ + ++ G LI G ++L + +Y + +S
Sbjct: 1555 ALMLTSHSMDECEALCSRIAVLNRGSLIAIGSSQELKSLYGNNYTMTLS 1603
>sp|P34358|YLH4_CAEEL PUTATIVE ABC TRANSPORTER C48B4.4 IN CHROMOSOME III
Length = 1758
Score = 119 bits (296), Expect = 4e-26
Identities = 88/314 (28%), Positives = 155/314 (49%), Gaps = 23/314 (7%)
Query: 21 VYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIKIIGMEMPRERVKIMRNV 80
V L+L+ +G LG NGAGK+TT + G ++PT G I I G ++ E + R++
Sbjct: 617 VDGLSLRAVRGQCSILLGHNGAGKSTTFSSIAGIIRPTNGRITICGYDVGNEPGETRRHI 676
Query: 81 GYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMAYTGVGRLAFNKIEELSSG 140
G P+ YD +T+ E L + L G + + L++ + K LS G
Sbjct: 677 GMCPQYNPLYDQLTVSEHLKLVYGLKGAREKDFKQDMKRLLSDVKLDFKENEKAVNLSGG 736
Query: 141 QRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILELAKSGKTVFISSHIVSEIE 200
++++ AL+GD E+++LDEPT+ +DP G + + K++E K+ +T+ +++H + E E
Sbjct: 737 MKRKLCVCMALIGDSEVVLLDEPTAGMDP-GARQDVQKLVEREKANRTILLTTHYMDEAE 795
Query: 201 RMCNYVGLIKDGQLIEQGKVRDLAKIESTDYDVVV-----SDNEKLLKFLRDKI--YVRE 253
R+ ++V ++ G+L+ G + L + T Y + V D K+ L D YV+E
Sbjct: 796 RLGDWVFIMSHGKLVASGTNQYLKQKFGTGYLLTVVLDHNGDKRKMAVILTDVCTHYVKE 855
Query: 254 VWEEE---GIVRVKLDERFSEKFFLELPAFLASEKLAIKLFK-------PHT--SPLERI 301
E + + L E ++F +P F A E + + ++ P+T S L +
Sbjct: 856 AERGEMHGQQIEIILPEARKKEF---VPLFQALEAIQDRNYRSNVFDNMPNTLKSQLATL 912
Query: 302 LMKRFNMGWKNGEQ 315
M+ F + EQ
Sbjct: 913 EMRSFGLSLNTLEQ 926
Score = 108 bits (268), Expect = 7e-23
Identities = 71/229 (31%), Positives = 118/229 (51%), Gaps = 8/229 (3%)
Query: 9 KELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIKIIGME 68
K+LTK FG+ V L L V + +G LG NGAGKTTT +LTG + GE I G +
Sbjct: 1436 KDLTKTFGRFTAVNELCLAVDQKECFGLLGVNGAGKTTTFNILTGQSFASSGEAMIGGRD 1495
Query: 69 MPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMAYTGVGR 128
V + ++GY P+ D+T E L + ++ G KA +A ++ G+
Sbjct: 1496 -----VTELISIGYCPQFDALMLDLTGRESLEILAQMHGFENYKA--KAELILECVGMIA 1548
Query: 129 LAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILELAK-SGK 187
A + S GQ++++ AL+ +++ILDEPT+ +DP R E +L + S
Sbjct: 1549 HADKLVRFYSGGQKRKISVGVALLAPTQMIILDEPTAGIDPKARREVWELLLWCREHSNS 1608
Query: 188 TVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAKIESTDYDVVVS 236
+ ++SH + E E +C+ + ++ G LI G ++L + +Y + +S
Sbjct: 1609 ALMLTSHSMDECEALCSRIAVLNRGSLIAIGSSQELKSLYGNNYTMTLS 1657
>emb|CAA82383.2| (Z29117) contains similarity to Pfam domain: PF00005 (ABC
transporter), Score=319.9, E-value=9.7e-93, N=2~cDNA EST
yk8d5.5 comes from this gene; cDNA EST yk10f12.3 comes
from this gene~cDNA EST yk5b3.3 comes from this gene;
cDNA EST yk5b3.5 comes from >
Length = 1689
Score = 119 bits (296), Expect = 4e-26
Identities = 88/314 (28%), Positives = 155/314 (49%), Gaps = 23/314 (7%)
Query: 21 VYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIKIIGMEMPRERVKIMRNV 80
V L+L+ +G LG NGAGK+TT + G ++PT G I I G ++ E + R++
Sbjct: 550 VDGLSLRAVRGQCSILLGHNGAGKSTTFSSIAGIIRPTNGRITICGYDVGNEPGETRRHI 609
Query: 81 GYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMAYTGVGRLAFNKIEELSSG 140
G P+ YD +T+ E L + L G + + L++ + K LS G
Sbjct: 610 GMCPQYNPLYDQLTVSEHLKLVYGLKGAREKDFKQDMKRLLSDVKLDFKENEKAVNLSGG 669
Query: 141 QRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILELAKSGKTVFISSHIVSEIE 200
++++ AL+GD E+++LDEPT+ +DP G + + K++E K+ +T+ +++H + E E
Sbjct: 670 MKRKLCVCMALIGDSEVVLLDEPTAGMDP-GARQDVQKLVEREKANRTILLTTHYMDEAE 728
Query: 201 RMCNYVGLIKDGQLIEQGKVRDLAKIESTDYDVVV-----SDNEKLLKFLRDKI--YVRE 253
R+ ++V ++ G+L+ G + L + T Y + V D K+ L D YV+E
Sbjct: 729 RLGDWVFIMSHGKLVASGTNQYLKQKFGTGYLLTVVLDHNGDKRKMAVILTDVCTHYVKE 788
Query: 254 VWEEE---GIVRVKLDERFSEKFFLELPAFLASEKLAIKLFK-------PHT--SPLERI 301
E + + L E ++F +P F A E + + ++ P+T S L +
Sbjct: 789 AERGEMHGQQIEIILPEARKKEF---VPLFQALEAIQDRNYRSNVFDNMPNTLKSQLATL 845
Query: 302 LMKRFNMGWKNGEQ 315
M+ F + EQ
Sbjct: 846 EMRSFGLSLNTLEQ 859
Score = 108 bits (268), Expect = 7e-23
Identities = 71/229 (31%), Positives = 118/229 (51%), Gaps = 8/229 (3%)
Query: 9 KELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIKIIGME 68
K+LTK FG+ V L L V + +G LG NGAGKTTT +LTG + GE I G +
Sbjct: 1367 KDLTKTFGRFTAVNELCLAVDQKECFGLLGVNGAGKTTTFNILTGQSFASSGEAMIGGRD 1426
Query: 69 MPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMAYTGVGR 128
V + ++GY P+ D+T E L + ++ G KA +A ++ G+
Sbjct: 1427 -----VTELISIGYCPQFDALMLDLTGRESLEILAQMHGFENYKA--KAELILECVGMIA 1479
Query: 129 LAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILELAK-SGK 187
A + S GQ++++ AL+ +++ILDEPT+ +DP R E +L + S
Sbjct: 1480 HADKLVRFYSGGQKRKISVGVALLAPTQMIILDEPTAGIDPKARREVWELLLWCREHSNS 1539
Query: 188 TVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAKIESTDYDVVVS 236
+ ++SH + E E +C+ + ++ G LI G ++L + +Y + +S
Sbjct: 1540 ALMLTSHSMDECEALCSRIAVLNRGSLIAIGSSQELKSLYGNNYTMTLS 1588
>emb|CAA82384.2| (Z29117) contains similarity to Pfam domain: PF00005 (ABC
transporter), Score=319.9, E-value=9.7e-93, N=2~cDNA EST
yk251b11.3 comes from this gene~cDNA EST yk251b11.5
comes from this gene~cDNA EST yk576e5.5 comes from this
gene~cDNA EST yk595f5.5 comes>
Length = 1691
Score = 119 bits (296), Expect = 4e-26
Identities = 88/314 (28%), Positives = 155/314 (49%), Gaps = 23/314 (7%)
Query: 21 VYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIKIIGMEMPRERVKIMRNV 80
V L+L+ +G LG NGAGK+TT + G ++PT G I I G ++ E + R++
Sbjct: 550 VDGLSLRAVRGQCSILLGHNGAGKSTTFSSIAGIIRPTNGRITICGYDVGNEPGETRRHI 609
Query: 81 GYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMAYTGVGRLAFNKIEELSSG 140
G P+ YD +T+ E L + L G + + L++ + K LS G
Sbjct: 610 GMCPQYNPLYDQLTVSEHLKLVYGLKGAREKDFKQDMKRLLSDVKLDFKENEKAVNLSGG 669
Query: 141 QRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILELAKSGKTVFISSHIVSEIE 200
++++ AL+GD E+++LDEPT+ +DP G + + K++E K+ +T+ +++H + E E
Sbjct: 670 MKRKLCVCMALIGDSEVVLLDEPTAGMDP-GARQDVQKLVEREKANRTILLTTHYMDEAE 728
Query: 201 RMCNYVGLIKDGQLIEQGKVRDLAKIESTDYDVVV-----SDNEKLLKFLRDKI--YVRE 253
R+ ++V ++ G+L+ G + L + T Y + V D K+ L D YV+E
Sbjct: 729 RLGDWVFIMSHGKLVASGTNQYLKQKFGTGYLLTVVLDHNGDKRKMAVILTDVCTHYVKE 788
Query: 254 VWEEE---GIVRVKLDERFSEKFFLELPAFLASEKLAIKLFK-------PHT--SPLERI 301
E + + L E ++F +P F A E + + ++ P+T S L +
Sbjct: 789 AERGEMHGQQIEIILPEARKKEF---VPLFQALEAIQDRNYRSNVFDNMPNTLKSQLATL 845
Query: 302 LMKRFNMGWKNGEQ 315
M+ F + EQ
Sbjct: 846 EMRSFGLSLNTLEQ 859
Score = 108 bits (268), Expect = 7e-23
Identities = 71/229 (31%), Positives = 118/229 (51%), Gaps = 8/229 (3%)
Query: 9 KELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIKIIGME 68
K+LTK FG+ V L L V + +G LG NGAGKTTT +LTG + GE I G +
Sbjct: 1369 KDLTKTFGRFTAVNELCLAVDQKECFGLLGVNGAGKTTTFNILTGQSFASSGEAMIGGRD 1428
Query: 69 MPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMAYTGVGR 128
V + ++GY P+ D+T E L + ++ G KA +A ++ G+
Sbjct: 1429 -----VTELISIGYCPQFDALMLDLTGRESLEILAQMHGFENYKA--KAELILECVGMIA 1481
Query: 129 LAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILELAK-SGK 187
A + S GQ++++ AL+ +++ILDEPT+ +DP R E +L + S
Sbjct: 1482 HADKLVRFYSGGQKRKISVGVALLAPTQMIILDEPTAGIDPKARREVWELLLWCREHSNS 1541
Query: 188 TVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAKIESTDYDVVVS 236
+ ++SH + E E +C+ + ++ G LI G ++L + +Y + +S
Sbjct: 1542 ALMLTSHSMDECEALCSRIAVLNRGSLIAIGSSQELKSLYGNNYTMTLS 1590
>gb|AAF49312.2| (AE003523) CG6052 gene product [Drosophila melanogaster]
Length = 1660
Score = 119 bits (296), Expect = 4e-26
Identities = 66/230 (28%), Positives = 127/230 (54%), Gaps = 2/230 (0%)
Query: 6 IETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIKII 65
I+ L K +GK V ++LK+ + + LG NGAGKTTTI M+TG +KPT G +
Sbjct: 475 IQLFNLQKNYGKLKAVKGISLKMHRNEITVLLGHNGAGKTTTINMITGIVKPTSGTAIVN 534
Query: 66 GMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAV-NQARELMAYT 124
G ++ K ++G P+ + + +M++ + +++ +L G+ KAV N+ + M
Sbjct: 535 GYDIRTHLAKARESLGICPQNNILFKEMSVRDHIIFFSKLKGIRGTKAVENEVGKYMTML 594
Query: 125 GVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILELAK 184
+ ++ + LS G ++++ AL G+ ++++ DEP+S +D GR + +L+ K
Sbjct: 595 KLQDKSYVAAKNLSGGMKRKLSLCCALCGNAKVVLCDEPSSGIDAAGRRS-LWDLLQSEK 653
Query: 185 SGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAKIESTDYDVV 234
G+T+ +++H + E + + + + ++ +G+L QG L K T Y +V
Sbjct: 654 DGRTILLTTHYMDEADVLGDRIAILSEGKLQCQGTSFYLKKRFGTGYLLV 703
Score = 111 bits (274), Expect = 1e-23
Identities = 89/317 (28%), Positives = 145/317 (45%), Gaps = 34/317 (10%)
Query: 10 ELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIKIIGMEM 69
+++K + + V ++ VP +G LG NGAGKT+T KML G K T GE I G +
Sbjct: 1300 KISKRYRSKLAVKAISFHVPHAECFGLLGINGAGKTSTFKMLAGDEKITSGEAYIDGTNI 1359
Query: 70 PRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMAYTGVGRL 129
K+ R +GY P+ ++D+T E L L G+ + L G +
Sbjct: 1360 STH--KVYRKIGYCPQFDALFEDLTGRETLNIYCLLRGVQRRHVTPICWGLAISFGFAKH 1417
Query: 130 AFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILELAKSGKTV 189
+ + S G R+++ A +++G+P +L LDEPTS +DP R + I + +GK++
Sbjct: 1418 MDKQTKHYSGGNRRKLSTAISVLGNPSVLYLDEPTSGMDPAARRQLWQIIGLIRTAGKSI 1477
Query: 190 FISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDL-------------AKIESTDYDVVVS 236
++SH + E E +C+ + ++ DG+ G V+ L K + + VV
Sbjct: 1478 VLTSHSMDECEALCSRLAIMVDGEFKCLGSVQSLKNQFSKGLILKVKVKHKKKTFQRVVE 1537
Query: 237 D----------NEKLLKFLRDKIYVREVWEEEGIVRVKLDERFSEKFFLELPAFLASEKL 286
D +E LKFL+ + V E R+ RF K E+P E+
Sbjct: 1538 DSSSSNDKKSISETDLKFLQ----MASVMESSQADRILKVNRFISK---EIPDAELKEEY 1590
Query: 287 --AIKLFKPHTSPLERI 301
I + PH+ L +I
Sbjct: 1591 NGLITYYIPHSKTLSKI 1607
>gb|AAG19162.1| (AE005013) Vng0668c [Halobacterium sp. NRC-1]
Length = 298
Score = 119 bits (295), Expect = 5e-26
Identities = 72/231 (31%), Positives = 121/231 (52%), Gaps = 8/231 (3%)
Query: 5 IIETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIKI 64
++ ++ K +G + ++L V +G V+ +GPNGAGKTT ++ LTG P G +++
Sbjct: 4 VLVADDVAKSYGDAAALRGVSLSVSEGEVFALVGPNGAGKTTLVRCLTGTTTPDGGRVEL 63
Query: 65 IGMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMAYT 124
+G E P++ K + +G +P+ D +T E + Y GL D A ++
Sbjct: 64 LG-EPPQDAQK--QRLGLLPQSFSPPDRLTAAELVGYYA---GLYADSRAPDA--VLESV 115
Query: 125 GVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILELAK 184
G+ + +LS GQR+R A+AL+ DP++L LDEPT+ +DP GR LA
Sbjct: 116 GLDPDDATRYGDLSGGQRRRACVAAALVNDPDVLFLDEPTTGVDPAGRHALWSVFEGLAA 175
Query: 185 SGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAKIESTDYDVVV 235
G T+ +++H ++E + + VGL+ DG + G DL + +VV
Sbjct: 176 DGTTIVLTTHDMAEASALADRVGLLADGDIAATGTPADLVAAHAGSPRLVV 226
>emb|CAC08414.1| (AL392178) putative ABC transport system ATP-binding protein
[Streptomyces coelicolor]
Length = 324
Score = 118 bits (294), Expect = 6e-26
Identities = 66/226 (29%), Positives = 116/226 (51%)
Query: 1 MPTYIIETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYG 60
M + I L K +G + V+ ++L VP+G V+ LGPNGAGKTT +K+L+ + P G
Sbjct: 1 MTSLAITANGLRKSYGDKTVLDGIDLAVPEGTVFSLLGPNGAGKTTAVKILSTLVTPDAG 60
Query: 61 EIKIIGMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQAREL 120
+I++ G ++ + +G + +T E ++ M L LP+ + A EL
Sbjct: 61 DIRVGGHDLASAPQAVRGAIGVTGQFSAVDGLITGEENMLLMADLHHLPRPEGRRVAAEL 120
Query: 121 MAYTGVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKIL 180
+ + A S G ++R+ A L+GDP ++ LDEPT+ LDP R I
Sbjct: 121 LERFDLTEAAGKPASTYSGGMKRRLDIAMTLVGDPRIIFLDEPTTGLDPRSRHTMWQIIR 180
Query: 181 ELAKSGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAKI 226
L G TVF+++ + E + + + + ++ DG++ +G +L ++
Sbjct: 181 ALVTDGVTVFLTTQYLEEADELADRIAVLHDGRIAAEGTAEELKRL 226
>gb|AAC23915.1| (AF000148) ATP-binding cassette transporter [Homo sapiens]
Length = 2273
Score = 118 bits (293), Expect = 8e-26
Identities = 65/212 (30%), Positives = 119/212 (55%), Gaps = 3/212 (1%)
Query: 9 KELTKFF--GKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIKIIG 66
K L K F R V LN+ + + FLG NGAGKTTT+ +LTG L PT G + + G
Sbjct: 932 KNLVKIFEPSGRPAVDRLNITFYENQITAFLGHNGAGKTTTLSILTGLLPPTSGTVLVGG 991
Query: 67 MEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMAYTGV 126
++ + +++G P+ + + +T+ E +++ +L G +++A + ++ TG+
Sbjct: 992 RDIETSLDAVRQSLGMCPQHNILFHHLTVAEHMLFYAQLKGKSQEEAQLEMEAMLEDTGL 1051
Query: 127 GRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILELAKSG 186
+ ++LS G ++++ A A +GD +++ILDEPTS +DP R I +L +SG
Sbjct: 1052 HHKRNEEAQDLSGGMQRKLSVAIAFVGDAKVVILDEPTSGVDPYSRRS-IWDLLLKYRSG 1110
Query: 187 KTVFISSHIVSEIERMCNYVGLIKDGQLIEQG 218
+T+ +S+H + E + + + + +I G+L G
Sbjct: 1111 RTIIMSTHHMDEADLLGDRIAIIAQGRLYCSG 1142
Score = 109 bits (270), Expect = 4e-23
Identities = 70/223 (31%), Positives = 112/223 (49%), Gaps = 2/223 (0%)
Query: 3 TYIIETKELTKFFGKRN--VVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYG 60
T I+ ELTK + + V L + V G +G LG NGAGKTTT KMLTG T G
Sbjct: 1935 TDILRLHELTKIYPGTSSPAVDRLCVGVRPGECFGLLGVNGAGKTTTFKMLTGDNTVTSG 1994
Query: 61 EIKIIGMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQAREL 120
+ + G + ++ +N+GY P+ + +T E L RL G+P ++ A
Sbjct: 1995 DATVAGKSILTNISEVHQNMGYCPQFDAIDELLTGREHLYLYARLRGVPAEEIEKVANWS 2054
Query: 121 MAYTGVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKIL 180
+ G+ A S G ++++ A AL+G P L++LDEPT+ +DP R I+
Sbjct: 2055 IKSLGLTVYADCLAGTYSGGNKRKLSTAIALIGCPPLVLLDEPTTGMDPQARRMLWNVIV 2114
Query: 181 ELAKSGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDL 223
+ + G+ V ++SH + E E +C + ++ G G ++ L
Sbjct: 2115 SIIREGRAVVLTSHSMEECEALCTRLAIMVKGAFRCMGTIQHL 2157
>gb|AAD20382.1| (AF125999) daunorubicin resistance protein A [Mycobacterium avium]
Length = 315
Score = 118 bits (293), Expect = 8e-26
Identities = 77/234 (32%), Positives = 119/234 (49%), Gaps = 1/234 (0%)
Query: 6 IETKELTKFFGKRNVVY-NLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIKI 64
IE + LTK FG V ++ VP G V G LG NGAGKTTTI +L+ ++PT G +
Sbjct: 6 IEVEGLTKKFGGSTVALAGVDFSVPAGTVCGLLGHNGAGKTTTINILSTLIRPTSGRGNV 65
Query: 65 IGMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMAYT 124
G ++ ++ N+G + +T E LV RL GL + +A +A EL+
Sbjct: 66 AGHDVVARPAEVRANIGMAGQFTGLDPMLTGRENLVLFSRLRGLNRRRAKARADELLEQF 125
Query: 125 GVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILELAK 184
+ A ++ S G +RV ASAL+ P++L LDEPT+ LDP R + + L
Sbjct: 126 NLVDAADRRLSTYSGGMFRRVDLASALVVPPKVLFLDEPTTGLDPRSRRDVWALVSSLRV 185
Query: 185 SGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAKIESTDYDVVVSDN 238
G TV +++ + E + + + + +I G++I G +L + T Y V N
Sbjct: 186 QGITVLLTTQYLEEADVLSDSIVVIDHGRVIASGTSEELKRAVGTSYCQVTPAN 239
>gb|AAC05632.1| (AF001945) rim ABC transporter [Homo sapiens]
Length = 2273
Score = 118 bits (292), Expect = 1e-25
Identities = 65/212 (30%), Positives = 119/212 (55%), Gaps = 3/212 (1%)
Query: 9 KELTKFFGK--RNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIKIIG 66
K L K F R V LN+ + + FLG NGAGKTTT+ +LTG L PT G + + G
Sbjct: 932 KNLVKIFEPCGRPAVDRLNITFYENQITAFLGHNGAGKTTTLSILTGLLPPTSGTVLVGG 991
Query: 67 MEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMAYTGV 126
++ + +++G P+ + + +T+ E +++ +L G +++A + ++ TG+
Sbjct: 992 RDIETSLDAVRQSLGMCPQHNILFHHLTVAEHMLFYAQLKGKSQEEAQLEMEAMLEDTGL 1051
Query: 127 GRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILELAKSG 186
+ ++LS G ++++ A A +GD +++ILDEPTS +DP R I +L +SG
Sbjct: 1052 HHKRNEEAQDLSGGMQRKLSVAIAFVGDAKVVILDEPTSGVDPYSRRS-IWDLLLKYRSG 1110
Query: 187 KTVFISSHIVSEIERMCNYVGLIKDGQLIEQG 218
+T+ +S+H + E + + + + +I G+L G
Sbjct: 1111 RTIIMSTHHMDEADLLGDRIAIIAQGRLYCSG 1142
Score = 110 bits (272), Expect = 2e-23
Identities = 70/223 (31%), Positives = 112/223 (49%), Gaps = 2/223 (0%)
Query: 3 TYIIETKELTKFFGKRN--VVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYG 60
T I+ ELTK + + V L + V G +G LG NGAGKTTT KMLTG T G
Sbjct: 1935 TDILRLHELTKIYPGTSSPAVDRLCVGVRPGECFGLLGVNGAGKTTTFKMLTGDTTVTSG 1994
Query: 61 EIKIIGMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQAREL 120
+ + G + ++ +N+GY P+ + +T E L RL G+P ++ A
Sbjct: 1995 DATVAGKSILTNISEVHQNMGYCPQFDAIDELLTGREHLYLYARLRGVPAEEIEKVANWS 2054
Query: 121 MAYTGVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKIL 180
+ G+ A S G ++++ A AL+G P L++LDEPT+ +DP R I+
Sbjct: 2055 IKSLGLTVYADCLAGTYSGGNKRKLSTAIALIGCPPLVLLDEPTTGMDPQARRMLWNVIV 2114
Query: 181 ELAKSGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDL 223
+ + G+ V ++SH + E E +C + ++ G G ++ L
Sbjct: 2115 SIIREGRAVVLTSHSMEECEALCTRLAIMVKGAFRCMGTIQHL 2157
>emb|CAA75729.1| (Y15635) ABCR [Homo sapiens]
Length = 2273
Score = 118 bits (292), Expect = 1e-25
Identities = 65/212 (30%), Positives = 119/212 (55%), Gaps = 3/212 (1%)
Query: 9 KELTKFFGK--RNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIKIIG 66
K L K F R V LN+ + + FLG NGAGKTTT+ +LTG L PT G + + G
Sbjct: 932 KNLVKIFEPCGRPAVDRLNITFYENQITAFLGHNGAGKTTTLSILTGLLPPTSGTVLVGG 991
Query: 67 MEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMAYTGV 126
++ + +++G P+ + + +T+ E +++ +L G +++A + ++ TG+
Sbjct: 992 RDIETSLDAVRQSLGMCPQHNILFHHLTVAEHMLFYAQLKGKSQEEAQLEMEAMLEDTGL 1051
Query: 127 GRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILELAKSG 186
+ ++LS G ++++ A A +GD +++ILDEPTS +DP R I +L +SG
Sbjct: 1052 HHKRNEEAQDLSGGMQRKLSVAIAFVGDAKVVILDEPTSGVDPYSRRS-IWDLLLKYRSG 1110
Query: 187 KTVFISSHIVSEIERMCNYVGLIKDGQLIEQG 218
+T+ +S+H + E + + + + +I G+L G
Sbjct: 1111 RTIIMSTHHMDEADLLGDRIAIIAQGRLYCSG 1142
Score = 109 bits (271), Expect = 3e-23
Identities = 70/223 (31%), Positives = 111/223 (49%), Gaps = 2/223 (0%)
Query: 3 TYIIETKELTKFF--GKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYG 60
T I+ ELTK + V L + V G +G LG NGAGKTTT KMLTG T G
Sbjct: 1935 TDILRLHELTKIYLGTSSPAVDRLCVGVRPGECFGLLGVNGAGKTTTFKMLTGDTTVTSG 1994
Query: 61 EIKIIGMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQAREL 120
+ + G + ++ +N+GY P+ + +T E L RL G+P ++ A
Sbjct: 1995 DATVAGKSILTNISEVHQNMGYCPQFDAIDELLTGREHLYLYARLRGVPAEEIEKVANWS 2054
Query: 121 MAYTGVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKIL 180
+ G+ A S G ++++ A AL+G P L++LDEPT+ +DP R I+
Sbjct: 2055 IKSLGLTVYADCLAGTYSGGNKRKLSTAIALIGCPPLVLLDEPTTGMDPQARRMLWNVIV 2114
Query: 181 ELAKSGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDL 223
+ + G+ V ++SH + E E +C + ++ G G ++ L
Sbjct: 2115 SIIREGRAVVLTSHSMEECEALCTRLAIMVKGAFRCMGTIQHL 2157
>sp|P78363|ABCR_HUMAN RETINAL-SPECIFIC ATP-BINDING CASSETTE TRANSPORTER (RIM ABC
TRANSPORTER) (RIM PROTEIN) (RMP) (STARGARDT DISEASE
PROTEIN)
Length = 2273
Score = 118 bits (292), Expect = 1e-25
Identities = 65/212 (30%), Positives = 119/212 (55%), Gaps = 3/212 (1%)
Query: 9 KELTKFFGK--RNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIKIIG 66
K L K F R V LN+ + + FLG NGAGKTTT+ +LTG L PT G + + G
Sbjct: 932 KNLVKIFEPCGRPAVDRLNITFYENQITAFLGHNGAGKTTTLSILTGLLPPTSGTVLVGG 991
Query: 67 MEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMAYTGV 126
++ + +++G P+ + + +T+ E +++ +L G +++A + ++ TG+
Sbjct: 992 RDIETSLDAVRQSLGMCPQHNILFHHLTVAEHMLFYAQLKGKSQEEAQLEMEAMLEDTGL 1051
Query: 127 GRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILELAKSG 186
+ ++LS G ++++ A A +GD +++ILDEPTS +DP R I +L +SG
Sbjct: 1052 HHKRNEEAQDLSGGMQRKLSVAIAFVGDAKVVILDEPTSGVDPYSRRS-IWDLLLKYRSG 1110
Query: 187 KTVFISSHIVSEIERMCNYVGLIKDGQLIEQG 218
+T+ +S+H + E + + + + +I G+L G
Sbjct: 1111 RTIIMSTHHMDEADLLGDRIAIIAQGRLYCSG 1142
Score = 110 bits (272), Expect = 2e-23
Identities = 70/223 (31%), Positives = 112/223 (49%), Gaps = 2/223 (0%)
Query: 3 TYIIETKELTKFFGKRN--VVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYG 60
T I+ ELTK + + V L + V G +G LG NGAGKTTT KMLTG T G
Sbjct: 1935 TDILRLHELTKIYPGTSSPAVDRLCVGVRPGECFGLLGVNGAGKTTTFKMLTGDTTVTSG 1994
Query: 61 EIKIIGMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQAREL 120
+ + G + ++ +N+GY P+ + +T E L RL G+P ++ A
Sbjct: 1995 DATVAGKSILTNISEVHQNMGYCPQFDAIDELLTGREHLYLYARLRGVPAEEIEKVANWS 2054
Query: 121 MAYTGVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKIL 180
+ G+ A S G ++++ A AL+G P L++LDEPT+ +DP R I+
Sbjct: 2055 IKSLGLTVYADCLAGTYSGGNKRKLSTAIALIGCPPLVLLDEPTTGMDPQARRMLWNVIV 2114
Query: 181 ELAKSGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDL 223
+ + G+ V ++SH + E E +C + ++ G G ++ L
Sbjct: 2115 SIIREGRAVVLTSHSMEECEALCTRLAIMVKGAFRCMGTIQHL 2157
>pir||B83294 probable ATP-binding component of ABC transporter PA2812 [imported]
- Pseudomonas aeruginosa (strain PAO1)
>gi|9948896|gb|AAG06200.1|AE004708_6 (AE004708) probable
ATP-binding component of ABC transporter [Pseudomonas
aeruginosa]
Length = 310
Score = 118 bits (292), Expect = 1e-25
Identities = 75/299 (25%), Positives = 148/299 (49%), Gaps = 6/299 (2%)
Query: 6 IETKELTKFFGKR-NVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIKI 64
+ ++LTK +G + ++L V +G + LGPNGAGK+TTI +L+ + T G + +
Sbjct: 5 LSIRQLTKTYGNGFQALKGIDLDVAEGDFFALLGPNGAGKSTTIGILSTLVNKTSGSVSV 64
Query: 65 IGMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMAYT 124
G ++ ++ + R +G +P+ +F+ +V G+P A +A +
Sbjct: 65 FGHDLDKDPAGLKRCLGVVPQEFNFNQFEKVFDIVVTQAGYYGIPAKIAKERAERYLTQL 124
Query: 125 GVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILELAK 184
G+ LS G ++R++ A AL+ P LLILDEPT+ +D R + EL +
Sbjct: 125 GLWDKRNEASRMLSGGMKRRLMIARALVHQPRLLILDEPTAGVDIELRRSMWSFLTELNQ 184
Query: 185 SGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAKIESTDYDVVVSDNEKLLKF 244
G ++ +++H + E E++C + +I G++++ +RDL ++ ++ N + L
Sbjct: 185 EGISIILTTHYLEEAEQLCRNIAIIDHGEIVQNTSMRDLLMTLHSETFLLDLKNVQALPP 244
Query: 245 LRDKIYVREVWEEEGIVRVKLDERFSEKFFLELPAFLASEKLAIKLFKPHTSPLERILM 303
D R V + V+V+ + ++ F A L ++ + + + T+ LE + +
Sbjct: 245 TLDGYPTRLVDDHTLEVQVEKSQGINDLF-----AQLGAQGIEVLSLRNKTNRLEELFV 298
>gi|11421340 ATP-binding cassette, sub-family A member 4 [Homo sapiens]
Length = 2300
Score = 118 bits (292), Expect = 1e-25
Identities = 65/212 (30%), Positives = 119/212 (55%), Gaps = 3/212 (1%)
Query: 9 KELTKFFGK--RNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIKIIG 66
K L K F R V LN+ + + FLG NGAGKTTT+ +LTG L PT G + + G
Sbjct: 959 KNLVKIFEPCGRPAVDRLNITFYENQITAFLGHNGAGKTTTLSILTGLLPPTSGTVLVGG 1018
Query: 67 MEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMAYTGV 126
++ + +++G P+ + + +T+ E +++ +L G +++A + ++ TG+
Sbjct: 1019 RDIETSLDAVRQSLGMCPQHNILFHHLTVAEHMLFYAQLKGKSQEEAQLEMEAMLEDTGL 1078
Query: 127 GRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILELAKSG 186
+ ++LS G ++++ A A +GD +++ILDEPTS +DP R I +L +SG
Sbjct: 1079 HHKRNEEAQDLSGGMQRKLSVAIAFVGDAKVVILDEPTSGVDPYSRRS-IWDLLLKYRSG 1137
Query: 187 KTVFISSHIVSEIERMCNYVGLIKDGQLIEQG 218
+T+ +S+H + E + + + + +I G+L G
Sbjct: 1138 RTIIMSTHHMDEADLLGDRIAIIAQGRLYCSG 1169
Score = 110 bits (272), Expect = 2e-23
Identities = 70/223 (31%), Positives = 112/223 (49%), Gaps = 2/223 (0%)
Query: 3 TYIIETKELTKFFGKRN--VVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYG 60
T I+ ELTK + + V L + V G +G LG NGAGKTTT KMLTG T G
Sbjct: 1962 TDILRLHELTKIYPGTSSPAVDRLCVGVRPGECFGLLGVNGAGKTTTFKMLTGDTTVTSG 2021
Query: 61 EIKIIGMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQAREL 120
+ + G + ++ +N+GY P+ + +T E L RL G+P ++ A
Sbjct: 2022 DATVAGKSILANISEVHQNMGYCPQFDAIDELLTGREHLYLYARLRGVPAEEIEKVANWS 2081
Query: 121 MAYTGVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKIL 180
+ G+ A S G ++++ A AL+G P L++LDEPT+ +DP R I+
Sbjct: 2082 IKSLGLTVYADCLAGTYSGGNKRKLSTAIALIGCPPLVLLDEPTTGMDPQARRMLWNVIV 2141
Query: 181 ELAKSGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDL 223
+ + G+ V ++SH + E E +C + ++ G G ++ L
Sbjct: 2142 SIIREGRAVVLTSHSMEECEALCTRLAIMVKGAFRCMGTIQHL 2184
>gb|AAG35594.1|AF200948_1 (AF200948) ABC1 transporter [Leishmania tropica]
Length = 1843
Score = 118 bits (292), Expect = 1e-25
Identities = 83/295 (28%), Positives = 141/295 (47%), Gaps = 16/295 (5%)
Query: 21 VYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIKIIGMEMPRERVKIMRNV 80
V N+ L V G V+GFLG NGAGKTTTI +L PT G + G ++ E + +R +
Sbjct: 1521 VRNIALGVRPGEVFGFLGTNGAGKTTTISILCQEFYPTSGRAYVCGNDIVTESSEALRCI 1580
Query: 81 GYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMAYTGVGRLAFNKIEELSSG 140
GY P+ D +T+ E L + G+ R LM G+ K ELS G
Sbjct: 1581 GYCPQFDACLDLLTVEEHLYLYAGVRGISSRACDRVVRGLMKLCGLTEYRRTKSHELSGG 1640
Query: 141 QRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILELAKSGKTVFISSHIVSEIE 200
R+++ A +L+G P ++ DEP++ +DP+ R + +E +V +++H + E+E
Sbjct: 1641 NRRKLSVAVSLIGGPRVVFFDEPSAGMDPVAR-RGLWNAIETVADNCSVVLTTHHLEEVE 1699
Query: 201 RMCNYVGLIKDGQLIEQGKVRDLAKIESTDYDVVVSDNEKLLKFLRDKIYVREVWEEEGI 260
+ + V ++ DG L G L + T ++V V ++ + + E++ EE
Sbjct: 1700 ALAHRVAIMVDGTLRCIGDKTHLKQKYGTGFEVAVRVADESPEVMAGV----ELFFEEEF 1755
Query: 261 VRVKLDERFSEKFFLELPAFL-----------ASEKLAIKLFKPHTSPLERILMK 304
KL E + +F +LP+ + EKL I + + +E++ M+
Sbjct: 1756 PSSKLTEVRAGRFTYQLPSTVRLSSVFTALEQQKEKLQICDYSVSQTSIEQVFMR 1810
Score = 91.7 bits (224), Expect = 1e-17
Identities = 52/185 (28%), Positives = 97/185 (52%), Gaps = 1/185 (0%)
Query: 30 KGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIKIIGMEMPRERVKIMRNVGYMPERPLA 89
+G + LG NGAGK+TT+ ++TG L+ G+ + G + E + + +G P+ +
Sbjct: 746 EGEISVLLGHNGAGKSTTMNLMTGMLEADGGDCYVYGHSVRHELSAVRQEIGLCPQHNIL 805
Query: 90 YDDMTIFEFLVYMGRLLGLPKDKAVNQARELMAYTGVGRLAFNKIEELSSGQRQRVLFAS 149
+ +T+ E L Y + GL + + R L+A + + LS GQ++++ A
Sbjct: 806 WPQLTVREHLDYYAAIKGLRGSEKEDAIRRLLAAVDLEDKEHYMSKALSGGQKRKLSVAV 865
Query: 150 ALMGDPELLILDEPTSNLDPLGRMEFIGKILELAKSGKTVFISSHIVSEIERMCNYVGLI 209
A +G L+ILDEPT+ +D R + E+AK T+ +++H + E + + + V ++
Sbjct: 866 AFVGGSRLVILDEPTAGMDVGARRHTWSLLKEMAK-WHTILLTTHFMDEADLLGDTVAIM 924
Query: 210 KDGQL 214
G+L
Sbjct: 925 SKGRL 929
>pir||F82572 sodium ABC transporter ATP-binding protein XF2329 [imported] -
Xylella fastidiosa (strain 9a5c)
>gi|9107498|gb|AAF85128.1|AE004043_12 (AE004043) sodium
ABC transporter ATP-binding protein [Xylella fastidiosa]
Length = 248
Score = 117 bits (291), Expect = 1e-25
Identities = 75/243 (30%), Positives = 120/243 (48%), Gaps = 10/243 (4%)
Query: 5 IIETKELTKFF----GKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYG 60
+I + L K F G N V +L+ G + G LGPNGAGKTTT++ML L P G
Sbjct: 1 MITAEHLHKSFKTKKGLVNAVKDLSFHAADGRITGLLGPNGAGKTTTLRMLYTLLIPDQG 60
Query: 61 EIKIIGMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQAREL 120
I I G++ + + + R +G +P+ Y +T E + Y G L GL + + L
Sbjct: 61 CISIDGVDAVSDPMTVRRGLGVLPDACGIYKRLTARENIAYFGELHGLSRIDIAARLSIL 120
Query: 121 MAYTGVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKIL 180
+ + + S GQR ++ A AL+ DP +ILDEPT+ LD + + +
Sbjct: 121 SKALDMDDILDRQAAGFSHGQRTKIAIARALVHDPRNIILDEPTNGLDVMTTRKLRDFLR 180
Query: 181 ELAKSGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLA------KIESTDYDVV 234
+L G+ + SSHI+ E+ +C+++ +I +G ++ G +L +E D V
Sbjct: 181 QLRAEGRCIIFSSHIMQEVAALCDHIIVIANGTVVVAGSGDELRARTGKDNLEDAFIDAV 240
Query: 235 VSD 237
SD
Sbjct: 241 GSD 243
>gb|AAA21451.1| (U01058) ABC family transporter [Entamoeba histolytica]
Length = 808
Score = 117 bits (290), Expect = 2e-25
Identities = 82/281 (29%), Positives = 146/281 (51%), Gaps = 15/281 (5%)
Query: 8 TKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIKIIGM 67
TK + + V L L+V +G LG NGAGKTTTI MLTG ++P G + G
Sbjct: 495 TKTFKQLGNTQTAVNQLCLEVGN-ETFGLLGQNGAGKTTTISMLTGLIEPNGGSATVCGY 553
Query: 68 EMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLG-LPKDKAVNQARELMAYTGV 126
+ + VG P+ + + D+T +E +++ RL G K K+V A+ ++ G+
Sbjct: 554 NIHNSMEDVHTVVGVCPQFDVLWPDLTTYEIILFYCRLKGHFLKSKSV--AKHILEDVGL 611
Query: 127 -----GRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILE 181
+ + +LS G R+R+ A A+ G+P+++ LDEPT+ LD R + IL+
Sbjct: 612 WSDKDPKPQNRRSSQLSGGMRRRLSIAIAMTGNPKVIFLDEPTTGLDVAIRRDVWDLILK 671
Query: 182 LAKSGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAKIESTDYDVVVSDNEKL 241
+ ++ + + I++H + E + +C+ VG++ DG LI G + + + Y + ++ E++
Sbjct: 672 IQRN-RCIIITTHSMEEADVLCDRVGIMSDGDLIALGTCQRIRNHYAPGYYIKIASEERI 730
Query: 242 --LKFLRDKIYVR-EVWEEEGIV--RVKLDERFSEKFFLEL 277
FL+ + EV EE GI+ + +D++ F E+
Sbjct: 731 EVTNFLKQLLGEDVEVKEERGILTAMIPIDKKRLSNIFSEV 771
>pir||T07714 probable ABC-type transport protein T23J7.80 - Arabidopsis thaliana
>gi|4741192|emb|CAB41858.1| (AL049746) ABC
transporter-like protein [Arabidopsis thaliana]
Length = 895
Score = 117 bits (290), Expect = 2e-25
Identities = 72/231 (31%), Positives = 130/231 (56%), Gaps = 8/231 (3%)
Query: 21 VYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIKIIGMEMPRERVKIMRNV 80
V L++ VP G +G LGPNGAGKT+ I M+TG +KPT G + +++ ++ K+ ++
Sbjct: 594 VGGLSIAVPPGECFGMLGPNGAGKTSFINMMTGLVKPTSGTALVESLDICQDMDKVYTSM 653
Query: 81 GYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQA-RELMAYTGVGR--LAFNKIEEL 137
G P+ L ++ +T E L++ GRL L K +NQA E + + R +A +
Sbjct: 654 GVCPQHDLLWETLTGREHLLFYGRLKNL-KGSDLNQAIEESLKSVNLSREGVADKPAGKY 712
Query: 138 SSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILELAKSGKTVFISSHIVS 197
S G ++R+ A +L+G P+++ +DEP++ LDP R + ++ AK + +++H +
Sbjct: 713 SGGMKRRLSVAISLIGSPKVVYMDEPSTGLDPASRRS-LWTAIKGAKKHTAIILTTHSME 771
Query: 198 EIERMCNYVGLIKDGQLIEQGKVRDLAKIESTDYDVVV---SDNEKLLKFL 245
E E +C+ +G+ DG+L G ++L Y + + S++EK ++ L
Sbjct: 772 EAEFLCDRLGIFVDGRLQCVGNPKELKARYGGSYVLTMTTSSEHEKDVEML 822
>emb|CAB53353.1| (AJ010260) NosF protein [Paracoccus denitrificans]
Length = 299
Score = 117 bits (290), Expect = 2e-25
Identities = 69/223 (30%), Positives = 118/223 (51%), Gaps = 6/223 (2%)
Query: 3 TYIIETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEI 62
T + LTK F + ++L + G LG NGAGK+T +K++ G + GE+
Sbjct: 2 TSTLTISRLTKRFQGVEALAEVSLDLGPGMRVALLGHNGAGKSTMMKIILGLIPFDAGEV 61
Query: 63 KIIGMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMA 122
++ G + ++ V Y+PE + +T E + + L G ++ +A EL+
Sbjct: 62 RVCGAAPGSSQARMQ--VAYLPENAAFHPALTGEEQIRHYLSLRG----ESPRRAMELLE 115
Query: 123 YTGVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILEL 182
G+ + A +I S G RQRV A L+G P LL+LDEPTS LDP+ R +F + L
Sbjct: 116 RVGLAKAARRRIGTYSKGMRQRVGLAQTLIGRPRLLVLDEPTSGLDPVSRRDFYALLDGL 175
Query: 183 AKSGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAK 225
A G + +SSH+++E+E + + ++ G+L+ +G + +L +
Sbjct: 176 AAEGAAILLSSHVLTEVEARTDRILILSQGRLVAEGTLAELRR 218
>dbj|BAB10070.1| (AB010069) contains similarity to ABC transporter~gene_id:K11J9.23
[Arabidopsis thaliana]
Length = 917
Score = 117 bits (290), Expect = 2e-25
Identities = 65/222 (29%), Positives = 117/222 (52%), Gaps = 3/222 (1%)
Query: 21 VYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIKIIGMEMPRERVKIMRNV 80
V L L V G +G LGPNGAGKT+ I M+TG LKP+ G + G+++ ++ K+ ++
Sbjct: 616 VRGLYLSVSSGECFGMLGPNGAGKTSFISMMTGLLKPSSGTALVQGLDICKDMNKVYTSM 675
Query: 81 GYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMAYTGV--GRLAFNKIEELS 138
G P+ L ++ +T E L++ GRL + E + + G + S
Sbjct: 676 GVCPQHDLLWETLTGREHLLFYGRLKNIKGSDLTQAVEESLKSVSLYDGGVGDKPAGNYS 735
Query: 139 SGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILELAKSGKTVFISSHIVSE 198
G ++R+ A +L+G+P+++ LDEP++ LDP R + +++ AK + +++H + E
Sbjct: 736 GGMKRRLSVAISLIGNPKVVYLDEPSTGLDPASRKN-LWNVIKRAKQNTAIILTTHSMEE 794
Query: 199 IERMCNYVGLIKDGQLIEQGKVRDLAKIESTDYDVVVSDNEK 240
E +C+ +G+ DG L G ++L Y ++ + K
Sbjct: 795 AEFLCDRLGIFVDGGLQCIGNSKELKSRYGGSYVFTMTTSSK 836
>gb|AAB01532.1| (U38418) ProV [Bacillus subtilis]
Length = 404
Score = 116 bits (289), Expect = 2e-25
Identities = 71/238 (29%), Positives = 132/238 (54%), Gaps = 3/238 (1%)
Query: 9 KELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIKIIGME 68
K L G + V N+NLK+ KG F+GP+G GKTTT+KM+ ++P+ G+I I G
Sbjct: 7 KCLENIKGGKKAVNNVNLKIAKGEFICFIGPSGCGKTTTMKMINRLIEPSAGKIFIDGEN 66
Query: 69 -MPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMAYTGVG 127
M ++ ++ R +GY+ ++ + MTI + + + +LL P+ +AREL+ +G
Sbjct: 67 IMEQDPEELRRKIGYVFQQIGLFPHMTIQQNISLVPKLLKWPEQHRKERARELLKLVDMG 126
Query: 128 RLAFNKI-EELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILELAKS- 185
++ ELS GQ+QR+ AL +P L+++DEP LDP+ R + +L K+
Sbjct: 127 PEYLDRYPHELSGGQQQRIGVLRALAREPPLILMDEPFGALDPITRDSLQEEFKKLQKTL 186
Query: 186 GKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAKIESTDYDVVVSDNEKLLK 243
KT+ +H + E ++ + + ++K G++++ G D+ + + ++ E+L++
Sbjct: 187 HKTIVFVTHDMDEAIKLADRIVILKAGEIVQVGTPDDILRNPADEFVEEFIGKERLIQ 244
>sp|O34992|OPCA_BACSU GLYCINE BETAINE/CARNITINE/CHOLINE TRANSPORT ATP-BINDING PROTEIN
OPUCA >gi|7442620|pir||C69670 glycine
betaine/carnitine/choline ABC transporter (ATP-bindin)
opuCA - Bacillus subtilis >gi|2271389|gb|AAB63768.1|
(AF009352) ATPase [Bacillus subtilis]
>gi|2635896|emb|CAB15388.1| (Z99121) glycine
betaine/carnitine/choline ABC transporter (ATP-binding
protein) [Bacillus subtilis]
Length = 380
Score = 116 bits (289), Expect = 2e-25
Identities = 73/271 (26%), Positives = 150/271 (54%), Gaps = 5/271 (1%)
Query: 5 IIETKELTKFF-GKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIK 63
+++ ++++K + G + V +++L + KG F+GP+G GKTTT+KM+ ++P+ G I
Sbjct: 1 MLKLEQVSKVYKGGKKAVNSIDLDIAKGEFICFIGPSGCGKTTTMKMINRLIEPSSGRIF 60
Query: 64 IIGME-MPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMA 122
I G M ++ V++ R +GY+ ++ + MTI + + + +LL P++K +AREL+
Sbjct: 61 IDGENIMEQDPVELRRKIGYVIQQIGLFPHMTIQQNISLVPKLLKWPEEKRKERARELLK 120
Query: 123 YTGVGRLAFNKI-EELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILE 181
+G ++ ELS GQ+QR+ AL +P L+++DEP LDP+ R + +
Sbjct: 121 LVDMGPEYLDRYPHELSGGQQQRIGVLRALAAEPPLILMDEPFGALDPITRDSLQEEFKK 180
Query: 182 LAKS-GKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAKIESTDYDVVVSDNEK 240
L ++ KT+ +H + E ++ + + ++K G++++ G ++ + + ++ E+
Sbjct: 181 LQRTLNKTIVFVTHDMDEAIKLADRIVILKAGEIVQVGTPDEILRNPANEFVEEFIGKER 240
Query: 241 LLKFLRDKIYVREVWEEEGIVRVKLDERFSE 271
L++ D V ++ V V D+ S+
Sbjct: 241 LIQSRPDIERVEQMMNRTP-VTVSADKTLSQ 270
>gi|6671495 ATP-binding cassette, sub-family A, member 4; ATP-binding cassette
10; Rim protein [Mus musculus] >gi|2547314|gb|AAC23916.1|
(AF000149) ATP-binding cassette transporter [Mus
musculus]
Length = 2310
Score = 116 bits (288), Expect = 3e-25
Identities = 65/212 (30%), Positives = 118/212 (55%), Gaps = 3/212 (1%)
Query: 9 KELTKFF--GKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIKIIG 66
K L K F R V LN+ + + FLG NGAGKTTT+ +LTG L PT G + I G
Sbjct: 932 KNLVKVFEPSGRPAVDRLNITFYENQITAFLGHNGAGKTTTLSILTGLLPPTSGTVLIGG 991
Query: 67 MEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMAYTGV 126
++ + +++G P+ + + +T+ E +++ +L G ++A + ++ TG+
Sbjct: 992 KDIETNLDVVRQSLGMCPQHNILFHHLTVAEHILFYAQLKGRSWEEAQLEMEAMLEDTGL 1051
Query: 127 GRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILELAKSG 186
+ ++LS G ++++ A A +GD ++++LDEPTS +DP R I +L +SG
Sbjct: 1052 HHKRNEEAQDLSGGMQRKLSVAIAFVGDSKVVVLDEPTSGVDPYSRRS-IWDLLLKYRSG 1110
Query: 187 KTVFISSHIVSEIERMCNYVGLIKDGQLIEQG 218
+T+ +S+H + E + + + + +I G+L G
Sbjct: 1111 RTIIMSTHHMDEADLLGDRIAIISQGRLYCSG 1142
Score = 113 bits (279), Expect = 4e-24
Identities = 72/223 (32%), Positives = 110/223 (49%), Gaps = 2/223 (0%)
Query: 3 TYIIETKELTKFFGKRN--VVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYG 60
T I++ ELTK + + V L + V G +G LG NGAGKTTT KMLTG T G
Sbjct: 1934 TDILKLNELTKVYSGSSSPAVDRLCVGVRPGECFGLLGVNGAGKTTTFKMLTGDTTVTSG 1993
Query: 61 EIKIIGMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQAREL 120
+ + G + + +N+GY P+ D +T E L RL G+P + A
Sbjct: 1994 DATVAGKSILTSISDVHQNMGYCPQFDAIDDLLTGREHLYLYARLRGVPSKEIEKVANWG 2053
Query: 121 MAYTGVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKIL 180
+ G+ A S G ++++ A AL G P LL+LDEPT+ +DP R I+
Sbjct: 2054 IQSLGLSLYADRLAGTYSGGNKRKLSTAIALTGCPPLLLLDEPTTGMDPQARRMLWNTIV 2113
Query: 181 ELAKSGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDL 223
+ + G+ V ++SH + E E +C + ++ G G ++ L
Sbjct: 2114 SIIREGRAVVLTSHSMEECEALCTRLAIMVKGTFQCLGTIQHL 2156
>sp|P42246|YCBN_BACSU HYPOTHETICAL 31.7 KD PROTEIN IN GLTP-CWLJ INTERGENIC REGION (ORF13)
>gi|7445785|pir||H69753 ABC transporter (ATP-binding
protein) homolog ycbN - Bacillus subtilis
>gi|2632543|emb|CAB12051.1| (Z99105) similar to ABC
transporter (ATP-binding protein) [Bacillus subtilis]
Length = 279
Score = 116 bits (288), Expect = 3e-25
Identities = 70/215 (32%), Positives = 124/215 (57%), Gaps = 6/215 (2%)
Query: 36 FLGPNGAGKTTTIKMLTGALKPTYGEIKIIGMEMPRERVKIMRNVGYMPERPLAYDDMTI 95
F GK +KMLT +KPT GEI I+G + +++ N+G M E P+ Y+++T
Sbjct: 14 FSARTARGKQPFMKMLTSLVKPTSGEIIILGNKFTHTSYEVLGNIGSMIEYPIFYENLTA 73
Query: 96 FEFLVYMG-RLLGLPKDKAVNQARELMAYTGVGRLAFNKIEELSSGQRQRVLFASALMGD 154
E L +G KA+ +E++ + ++ ++ S G +QR+ A A++
Sbjct: 74 EENLERSACEYMGYHNKKAI---QEVLDMVNLKQIDKKPVKTFSLGMKQRLGIARAILTK 130
Query: 155 PELLILDEPTSNLDPLGRMEFIGKILELAKS-GKTVFISSHIVSEIERMCNYVGLIKDGQ 213
P+LLILDEP + LDPLG + L+K G T+ ISSH++ EIE++ + +G+I+DG+
Sbjct: 131 PDLLILDEPVNGLDPLGIKKIRQLFQVLSKEYGMTLLISSHLLGEIEQIADTIGVIRDGR 190
Query: 214 LIEQGKVRDLAKIESTDYDVVVSDNEKLLKFLRDK 248
L+E+ + D+ + ++T+Y +++ N+ F+ +K
Sbjct: 191 LLEEVSMEDV-RGQNTEYIELLTPNQTRACFVLEK 224
>gi|4557876 ATP-binding cassette, sub-family A member 4; ATP binding cassette
transporter; ATP-binding transporter, retina-specific;
rim protein [Homo sapiens] >gi|1888527|gb|AAC51144.1|
(U88667) ATP-binding cassette transporter [Homo sapiens]
Length = 2273
Score = 116 bits (287), Expect = 4e-25
Identities = 64/212 (30%), Positives = 117/212 (55%), Gaps = 3/212 (1%)
Query: 9 KELTKFFGK--RNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIKIIG 66
K L K F R V LN+ + + FLG NGAGKTTT+ +LTG L PT G + + G
Sbjct: 932 KNLVKIFEPCGRPAVDRLNITFYENQITAFLGHNGAGKTTTLSILTGLLPPTSGTVLVGG 991
Query: 67 MEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMAYTGV 126
++ + +++G P+ + + +T+ E +++ +L G +++A + ++ TG+
Sbjct: 992 RDIETSLDAVRQSLGMCPQHNILFHHLTVAEHMLFYAQLKGKSQEEAQLEMEAMLEDTGL 1051
Query: 127 GRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILELAKSG 186
+ ++LS G ++++ A A +GD +++ILDEPTS +DP R I +L +SG
Sbjct: 1052 HHKRNEEAQDLSGGMQRKLSVAIAFVGDAKVVILDEPTSGVDPYSRRS-IWDLLLKYRSG 1110
Query: 187 KTVFISSHIVSEIERMCNYVGLIKDGQLIEQG 218
+T+ + +H + E + + + +I G+L G
Sbjct: 1111 RTIIMPTHHMDEADHQGDRIAIIAQGRLYCSG 1142
Score = 109 bits (271), Expect = 3e-23
Identities = 70/223 (31%), Positives = 111/223 (49%), Gaps = 2/223 (0%)
Query: 3 TYIIETKELTKFF--GKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYG 60
T I+ ELTK + V L + V G +G LG NGAGKTTT KMLTG T G
Sbjct: 1935 TDILRLHELTKIYLGTSSPAVDRLCVGVRPGECFGLLGVNGAGKTTTFKMLTGDTTVTSG 1994
Query: 61 EIKIIGMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQAREL 120
+ + G + ++ +N+GY P+ + +T E L RL G+P ++ A
Sbjct: 1995 DATVAGKSILTNISEVHQNMGYCPQFDAIDELLTGREHLYLYARLRGVPAEEIEKVANWS 2054
Query: 121 MAYTGVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKIL 180
+ G+ A S G ++++ A AL+G P L++LDEPT+ +DP R I+
Sbjct: 2055 IKSLGLTVYADCLAGTYSGGNKRKLSTAIALIGCPPLVLLDEPTTGMDPQARRMLWNVIV 2114
Query: 181 ELAKSGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDL 223
+ + G+ V ++SH + E E +C + ++ G G ++ L
Sbjct: 2115 SIIRKGRAVVLTSHSMEECEALCTRLAIMVKGAFRCMGTIQHL 2157
>pir||JN0849 hypothetical 35K protein - Streptomyces lividans
>gi|47168|emb|CAA46525.1| (X65556) open reading frame
[Streptomyces lividans] >gi|5918477|emb|CAB56355.1|
(AL118514) ABC transport protein, ATP-binding subunit
[Streptomyces coelicolor A3(2)]
Length = 326
Score = 115 bits (286), Expect = 6e-25
Identities = 65/217 (29%), Positives = 118/217 (53%), Gaps = 8/217 (3%)
Query: 4 YIIETKELTKFFGKR-NVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEI 62
++IE +L + +G V ++ V +G V+ LG NGAGKT+T+++L G P G +
Sbjct: 8 HVIEVTDLRRVYGGGFEAVRGIDFSVRRGEVFALLGTNGAGKTSTVELLEGLAAPAGGRV 67
Query: 63 KIIGMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFL-VYMGRLLGLPKDKAVNQARELM 121
+++G + ER + G M + ++T+ E ++ G + G E++
Sbjct: 68 RVLGHDPYTERAAVRPRTGVMLQEGGFPSELTVAETARMWAGCVSG------ARPPAEVL 121
Query: 122 AYTGVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILE 181
A G+ + ++++LS GQR+R+ A AL+GDPE+L LDEP++ LD GR + +
Sbjct: 122 ALVGLEAKSGTRVKQLSGGQRRRLDLALALLGDPEVLFLDEPSTGLDAEGRRDTWELVGA 181
Query: 182 LAKSGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQG 218
L G TV +++H + E E + + + ++ DG++ G
Sbjct: 182 LRDQGTTVLLTTHYLEEAEHLADRLAIMHDGRIAATG 218
>gb|AAC48716.1| (U90126) ABC transporter [Bos taurus]
Length = 2281
Score = 115 bits (286), Expect = 6e-25
Identities = 65/212 (30%), Positives = 117/212 (54%), Gaps = 3/212 (1%)
Query: 9 KELTKFFGK--RNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIKIIG 66
K L K F R V LN+ + + FLG NGAGKTTT+ ++TG L PT G + + G
Sbjct: 932 KNLVKIFEPYGRPAVDRLNITFYESQITAFLGHNGAGKTTTLSIMTGLLPPTSGTVLVGG 991
Query: 67 MEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMAYTGV 126
++ I +++G P+ + + +T+ E +++ +L G D+A + ++ TG+
Sbjct: 992 KDIETNLDAIRQSLGMCPQHNILFHHLTVAEHILFYAQLKGRSWDEAQLEMEAMLEDTGL 1051
Query: 127 GRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILELAKSG 186
+ +LS G ++++ A A +GD ++++LDEPTS +DP R I +L +SG
Sbjct: 1052 HHKRNEEARDLSGGVQRKLSVAIAFVGDAKVVVLDEPTSGVDPYSRRS-IWDLLLKYRSG 1110
Query: 187 KTVFISSHIVSEIERMCNYVGLIKDGQLIEQG 218
+T+ +S+H + E + + + + +I G+L G
Sbjct: 1111 RTIIMSTHHMDEADILGDRIAIISQGRLYCSG 1142
Score = 106 bits (263), Expect = 3e-22
Identities = 68/223 (30%), Positives = 109/223 (48%), Gaps = 2/223 (0%)
Query: 3 TYIIETKELTKFFGKRN--VVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYG 60
T I+ ELTK + + V L + V G +G LG NGAGKTTT KMLTG T G
Sbjct: 1933 TDILRLNELTKVYSGTSSPAVDRLCVGVRPGECFGLLGVNGAGKTTTFKMLTGDTAVTSG 1992
Query: 61 EIKIIGMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQAREL 120
+ + G + + +++GY P+ D +T E L RL G+P ++
Sbjct: 1993 DATVAGKSILTNISDVHQSMGYCPQFDAIDDLLTGREHLYLYARLRGVPAEEIERVTNWS 2052
Query: 121 MAYTGVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKIL 180
+ G+ A S G ++++ A AL+G P L++LDEPT+ +DP R I+
Sbjct: 2053 IQSLGLSLYADRLAGTYSGGNKRKLSTAIALIGCPPLVLLDEPTTGMDPQARRMLWNTIM 2112
Query: 181 ELAKSGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDL 223
+ + + V ++SH + E E +C + ++ G G ++ L
Sbjct: 2113 GIIREERAVVLTSHSMEECEALCTRLAIMVKGAFQCLGTIQHL 2155
>pir||B75082 phosphate abc transporter, ATP-binding protein (pstb) PAB0700 -
Pyrococcus abyssi (strain Orsay)
>gi|5458471|emb|CAB49959.1| (AJ248286) phosphate ABC
transporter, ATP-binding protein (pstB) [Pyrococcus
abyssi]
Length = 280
Score = 115 bits (286), Expect = 6e-25
Identities = 67/234 (28%), Positives = 125/234 (52%), Gaps = 14/234 (5%)
Query: 1 MPTYIIETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGAL----- 55
M + IET+ L ++G V+ +NLK+PK V+ +GP+G GK+T ++ L
Sbjct: 28 MKEFAIETRNLRIYYGSNEVIKGINLKIPKNVVFALMGPSGCGKSTLLRAFNRLLDLNPE 87
Query: 56 KPTYGEIKIIGMEM---PRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDK 112
GE++I G+ + + +++ R VG + + P + +TI+E + +L GL K K
Sbjct: 88 AKVEGEVRISGVNIYSPDVDPIRVRREVGMVFQYPNPFPHLTIYENVAIGVKLNGLAKGK 147
Query: 113 AVNQ-----ARELMAYTGVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNL 167
+++ ++ + V + LS GQ+QR++ A L P+++++DEPT+N+
Sbjct: 148 ELDEIVKWALKKATLWDEVKNRLKDYPANLSGGQKQRLVIARVLAMKPKIILMDEPTANI 207
Query: 168 DPLGRMEFIGKILELAKSGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVR 221
DP+G + + EL K T+ + +H ++ R+ +YV I G+++E G R
Sbjct: 208 DPVGTRKIEELLFEL-KKDYTIVLVTHSPAQAARVSDYVAFIYMGKIVEVGPTR 260
>gb|AAG39073.1|AF287263_1 (AF287263) ATP-binding cassette 1, sub-family A, member 1 [Mus
musculus]
Length = 2198
Score = 115 bits (286), Expect = 6e-25
Identities = 70/233 (30%), Positives = 120/233 (51%), Gaps = 3/233 (1%)
Query: 5 IIETKELTKFFGKRN--VVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEI 62
I+E KELTK + ++ V + + +P G +G LG NGAGK+TT KMLTG T G+
Sbjct: 1849 ILEIKELTKIYRRKRKPAVDRICIGIPPGECFGLLGVNGAGKSTTFKMLTGDTPVTRGDA 1908
Query: 63 KIIGMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMA 122
+ + ++ +N+GY P+ + +T E + + L G+P +K V + +
Sbjct: 1909 FLNKNSILSNIHEVHQNMGYCPQFDAITELLTGREHVEFFALLRGVP-EKEVGKGEWAIR 1967
Query: 123 YTGVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILEL 182
G+ + S G ++++ A AL+G P ++ LDEPT+ +DP R L +
Sbjct: 1968 KLGLVKYGEKYASNYSGGNKRKLSTAMALIGGPPVVFLDEPTTGMDPKARRFLWNCALSI 2027
Query: 183 AKSGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAKIESTDYDVVV 235
K G++V ++SH + E E +C + ++ +G+ G V+ L Y +VV
Sbjct: 2028 VKEGRSVVLTSHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTIVV 2080
Score = 113 bits (279), Expect = 4e-24
Identities = 76/254 (29%), Positives = 131/254 (50%), Gaps = 9/254 (3%)
Query: 2 PTYI---IETKELTKFF--GKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALK 56
PT++ + + L K + G + V L L +G + FLG NGAGKTTT+ +LTG
Sbjct: 832 PTHLRLGVSIQNLVKVYRDGMKVAVDGLALNFYEGQITSFLGHNGAGKTTTMSILTGLFP 891
Query: 57 PTYGEIKIIGMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQ 116
PT G I+G ++ E I +N+G P+ + +D +T+ E + + RL GL + +
Sbjct: 892 PTSGTAYILGKDIRSEMSSIRQNLGVCPQHNVLFDMLTVEEHIWFYARLKGLSEKHVKAE 951
Query: 117 ARELMAYTGVGRLAF-NKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEF 175
++ G+ +K +LS G ++++ A A +G +++ILDEPT+ +DP R
Sbjct: 952 MEQMALDVGLPPSKLKSKTSQLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYSR-RG 1010
Query: 176 IGKILELAKSGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAKIESTDY--DV 233
I ++L + G+T+ +S+H + E + + + + +I G+L G L T Y +
Sbjct: 1011 IWELLLKYRQGRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKNQLGTGYYLTL 1070
Query: 234 VVSDNEKLLKFLRD 247
V D E L R+
Sbjct: 1071 VKKDVESSLSSCRN 1084
>gi|11498898 ABC transporter, ATP-binding protein [Archaeoglobus fulgidus]
>gi|7445659|pir||C69412 ABC transporter, ATP-binding
protein homolog - Archaeoglobus fulgidus
>gi|2649279|gb|AAB89946.1| (AE001014) ABC transporter,
ATP-binding protein [Archaeoglobus fulgidus]
Length = 303
Score = 115 bits (285), Expect = 7e-25
Identities = 77/288 (26%), Positives = 142/288 (48%), Gaps = 29/288 (10%)
Query: 15 FGKRNVVY--NLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIKIIGMEMPRE 72
F +R +V ++L + G ++G LGPNGAGKTT I +L+ L PT GE++I+GM+ +
Sbjct: 16 FMERGIVALRGIDLDIEDGVIFGLLGPNGAGKTTLISILSTILIPTKGEVRILGMDAFKN 75
Query: 73 RVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMAYTGVGRLAFN 132
K+ + + + M ++E L + G+ + V++ +++ +
Sbjct: 76 TRKVRERINISSGVRMPW-GMKVYECLRFYAMCYGITDRRVVDR---VISEFELEEHRNK 131
Query: 133 KIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILEL-AKSGKTVFI 191
+ ++LS+G +Q+ A A + DPE++ LDEPT+NLDP + IL + + T+ +
Sbjct: 132 RFDDLSTGNKQKANLARAFLNDPEVVFLDEPTANLDPDMAKKIRQMILRIKEEKDVTIVL 191
Query: 192 SSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAKIESTDYDVVVS--------------- 236
++H + E E +C+ + IK+G+++ +G +L K V++
Sbjct: 192 TTHNMREAEMLCDRIAFIKEGKIVAEGTSEELKKYTKMSERVILKLKGNAKKLHIPYPYR 251
Query: 237 -DNEKLLKFLRD------KIYVREVWEEEGIVRVKLDERFSEKFFLEL 277
D L+ F+ D I VR + + K++E E F+EL
Sbjct: 252 MDGNTLIAFVEDAEKALPSIVVRLAEQGVFVESAKMEEITLEDVFIEL 299
>pir||S72783 probable ABC-type transport protein B1496_F3_97 - Mycobacterium
leprae >gi|466902|gb|AAA17147.1| (U00013) abc2;
B1496_F3_97 [Mycobacterium leprae]
>gi|2398710|emb|CAB16175.1| (Z99125) ABC-type
transporter [Mycobacterium leprae]
Length = 315
Score = 114 bits (283), Expect = 1e-24
Identities = 70/229 (30%), Positives = 114/229 (49%), Gaps = 5/229 (2%)
Query: 2 PTYIIETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGE 61
P +I + + K +G V NL+L + V LGPNGAGKTTT++M G ++P G
Sbjct: 11 PEVVIRLRGVCKHYGSILAVSNLDLDIHSAEVLALLGPNGAGKTTTVEMCEGFVRPDAGT 70
Query: 62 IKIIGMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELM 121
I+++G++ + ++ +G M + Y E L + P D E +
Sbjct: 71 IEVLGLDPITDNARLRARIGVMLQGGGGYPAARAGEMLNLVASYAADPLDP--EWLLETL 128
Query: 122 AYTGVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILE 181
T V R + + LS GQ+QR+ A L+G PEL+ LDEPT+ +D R+ I
Sbjct: 129 GLTDVARTTYRR---LSGGQQQRLALACTLVGRPELVFLDEPTAGMDTHARLLVWELIDT 185
Query: 182 LAKSGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAKIESTD 230
L + G TV +++H + E E + + + +I G++I G +L + D
Sbjct: 186 LRRDGVTVVLTTHQLKEAEELADRLVIIDHGRMIAAGTPTELMHTGAKD 234
>pir||S76278 ABC-type transport protein sll0759 - Synechocystis sp. (strain PCC
6803) >gi|1001505|dbj|BAA10130.1| (D64000) ABC
transporter [Synechocystis sp.]
Length = 347
Score = 114 bits (283), Expect = 1e-24
Identities = 76/256 (29%), Positives = 126/256 (48%), Gaps = 7/256 (2%)
Query: 6 IETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIKII 65
++ K+L K +G V +++ VP+G ++G LGPNGAGKTTTI+ L KP GE+ I
Sbjct: 11 VQVKQLRKKYGAIPAVKDISFAVPRGEIFGLLGPNGAGKTTTIRCLCTLAKPDGGELWID 70
Query: 66 GMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMAYTG 125
G+ + + + R +GY+ + +T E L L L + + +L+ G
Sbjct: 71 GVNVLSDPRQARRRLGYVAQEVAIDKILTGRELLQLQASLYHLDAISSQKRIDQLLDILG 130
Query: 126 VGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILELAKS 185
+ A K S G ++R+ A+ L+ P +L+LDEP+ LD R + +L +
Sbjct: 131 LTAYADQKTGTYSGGLKKRLDLAAGLLHQPTVLVLDEPSVGLDIESRFILWEFLRQLRDA 190
Query: 186 GKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAKIESTDYDVV-------VSDN 238
G TV I+SH + EI+ + + + +I G +I G +L D + +
Sbjct: 191 GTTVVITSHYLEEIDALADRLAIIDQGTVIATGTPTELKDRVGGDRVTLRIKEFTADQEA 250
Query: 239 EKLLKFLRDKIYVREV 254
EK + LR +V+EV
Sbjct: 251 EKASQILRSLAFVQEV 266
>pir||T33783 hypothetical protein Y39D8C.1 - Caenorhabditis elegans
>gi|3806158|gb|AAC69223.1| (AF101313) similar to the
ATP-binding transport protein family (ABC transporter)
(Pfam: ABC_tran.hmm, score: 162.68 and 139.46)
[Caenorhabditis elegans]
Length = 1802
Score = 114 bits (283), Expect = 1e-24
Identities = 70/264 (26%), Positives = 129/264 (48%), Gaps = 6/264 (2%)
Query: 8 TKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIKIIGM 67
+ L K++G N V +N V +G LG NGAGKT+T +MLTG + G+ + G
Sbjct: 1452 SNNLVKWYGNFNAVKGVNFHVNSKDCFGLLGVNGAGKTSTFQMLTGENSISSGDAYVNGW 1511
Query: 68 EMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMAYTGVG 127
+ + N GY P+ +M+ E L R+ G+P+ + ++ G+G
Sbjct: 1512 SVKNNWREAGANTGYCPQYDAIIKEMSGEETLYMFARIRGIPEKDIPKKVNAVIHAIGIG 1571
Query: 128 RLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILELAKSGK 187
A +I+ S G ++R+ A++G P++L+LDEPTS +DP R + L G
Sbjct: 1572 MYASRQIKTYSGGNKRRLSLGIAIVGLPDVLLLDEPTSGVDPKARRIIWNILNRLRDLGT 1631
Query: 188 TVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAKIESTDYDVVV-----SDNEKLL 242
+ ++SH + E E +C + ++ G+ G + + + Y +++ +D EK
Sbjct: 1632 ALVLTSHSMDECEALCTELAIMVYGKFRCYGSCQHIKSRYGSGYTLLIRLKNRNDAEKTK 1691
Query: 243 KFLRDKIYVREVWEEEGIVRVKLD 266
++ + + V +EE ++++ D
Sbjct: 1692 STIK-QTFRGSVIKEEHVLQLNFD 1714
Score = 109 bits (270), Expect = 4e-23
Identities = 65/199 (32%), Positives = 107/199 (53%), Gaps = 3/199 (1%)
Query: 16 GKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIKIIGMEMPRERVK 75
G++ V NLNLK+ G LG NGAGK+TT MLTG P+ G + ++ K
Sbjct: 610 GEKRAVSNLNLKMYPGQCTVLLGHNGAGKSTTFSMLTGVASPSSGSAYVNDFDIRTSLPK 669
Query: 76 IMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMAYTGVGRLAFNKIE 135
I R +G P+ + MT+ E L + +L D +ARE++A + A
Sbjct: 670 IRREMGLCPQYNTLFGFMTVMEHLEFFAKLKERTWDP--EEAREILARLRIDFKADFMAG 727
Query: 136 ELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILELAKSGKTVFISSHI 195
LS GQ++++ A AL+G E+++LDEPTS +DP R E +++ K +T+ +++H
Sbjct: 728 ALSGGQKRKLSLAIALIGGSEVVMLDEPTSGMDPGARHE-TWTLIQREKERRTILLTTHF 786
Query: 196 VSEIERMCNYVGLIKDGQL 214
+ E + + + + ++ GQL
Sbjct: 787 MEEADLLGDRIAIMAHGQL 805
>gi|7304849 ATP-binding cassette 1, sub-family A, member 1 [Mus musculus]
>gi|728773|sp|P41233|ABC1_MOUSE ATP-BINDING CASSETTE,
SUB-FAMILY A, MEMBER 1 (ATP-BINDING CASSETTE TRANSPORTER
1) (ATP-BINDING CASSETTE 1) (ABC-1)
>gi|1082238|pir||A54774 ATP binding cassette transporter
ABC1 - mouse >gi|495257|emb|CAA53530.1| (X75926) abc1
[Mus musculus]
Length = 2201
Score = 114 bits (282), Expect = 2e-24
Identities = 68/233 (29%), Positives = 118/233 (50%), Gaps = 2/233 (0%)
Query: 5 IIETKELTKFFGKRN--VVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEI 62
I+E KELTK + ++ V + + +P G +G LG NGAGK+TT KMLTG T G+
Sbjct: 1851 ILEIKELTKIYRRKRKPAVDRICIGIPPGECFGLLGVNGAGKSTTFKMLTGDTPVTRGDA 1910
Query: 63 KIIGMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMA 122
+ + ++ +N+GY P+ + +T E + + L G+P+ + +
Sbjct: 1911 FLNKNSILSNIHEVHQNMGYCPQFDAITELLTGREHVEFFALLRGVPEKEVGKFGEWAIR 1970
Query: 123 YTGVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILEL 182
G+ + S G ++++ A AL+G P ++ LDEPT+ +DP R L +
Sbjct: 1971 KLGLVKYGEKYASNYSGGNKRKLSTAMALIGGPPVVFLDEPTTGMDPKARRFLWNCALSI 2030
Query: 183 AKSGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAKIESTDYDVVV 235
K G++V ++SH + E E +C + ++ +G+ G V+ L Y +VV
Sbjct: 2031 VKEGRSVVLTSHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTIVV 2083
Score = 113 bits (279), Expect = 4e-24
Identities = 76/254 (29%), Positives = 131/254 (50%), Gaps = 9/254 (3%)
Query: 2 PTYI---IETKELTKFF--GKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALK 56
PT++ + + L K + G + V L L +G + FLG NGAGKTTT+ +LTG
Sbjct: 832 PTHLRLGVSIQNLVKVYRDGMKVAVDGLALNFYEGQITSFLGHNGAGKTTTMSILTGLFP 891
Query: 57 PTYGEIKIIGMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQ 116
PT G I+G ++ E I +N+G P+ + +D +T+ E + + RL GL + +
Sbjct: 892 PTSGTAYILGKDIRSEMSSIRQNLGVCPQHNVLFDMLTVEEHIWFYARLKGLSEKHVKAE 951
Query: 117 ARELMAYTGVGRLAF-NKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEF 175
++ G+ +K +LS G ++++ A A +G +++ILDEPT+ +DP R
Sbjct: 952 MEQMALDVGLPPSKLKSKTSQLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYSR-RG 1010
Query: 176 IGKILELAKSGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAKIESTDY--DV 233
I ++L + G+T+ +S+H + E + + + + +I G+L G L T Y +
Sbjct: 1011 IWELLLKYRQGRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKNQLGTGYYLTL 1070
Query: 234 VVSDNEKLLKFLRD 247
V D E L R+
Sbjct: 1071 VKKDVESSLSSCRN 1084
>pir||T45470 ATP-binding ABC transport protein [imported] - Erysipelothrix
rhusiopathiae >gi|1335913|gb|AAB01157.1| (U52850)
unknown [Erysipelothrix rhusiopathiae]
Length = 246
Score = 113 bits (280), Expect = 3e-24
Identities = 74/225 (32%), Positives = 119/225 (52%), Gaps = 11/225 (4%)
Query: 4 YIIETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIK 63
Y IE ++LT + + V+++ ++K KG + +GPNGAGK+T IK + G LKP G+I
Sbjct: 6 YAIEVEDLTVTYDVKPVLWDCDVKFEKGKLTAIVGPNGAGKSTMIKAIMGLLKPISGKIT 65
Query: 64 IIGMEMPRERVKIMRNVGYMPER-PLAYDDMTIFEFLVYMGRL-----LGLPKDKAVNQA 117
I G E +N+ Y+P+ + +D E +V MGR + P+ + A
Sbjct: 66 INGQHQKDE----YKNIAYVPQSGSVDWDFPATVEDIVLMGRYGHIGWIKRPRKEDREIA 121
Query: 118 RELMAYTGVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIG 177
E++ G+ +I +LS GQ+QRV A AL E+ ILDEP +D +
Sbjct: 122 NEMLERVGMSAYRDRQISQLSGGQQQRVFLARALTQQAEIYILDEPLKGVDVKTEEILMT 181
Query: 178 KILELAKSGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRD 222
+ ELA SGKTV + H ++ IE + + L+ + +L+ G V++
Sbjct: 182 LLKELAASGKTVIVVHHDLTSIEGYFDNIALV-NVKLVAWGPVQN 225
>pir||C70529 probable ABC transporter - Mycobacterium tuberculosis (strain
H37RV) >gi|2181979|emb|CAB09479.1| (Z96072) hypothetical
protein Rv2688c [Mycobacterium tuberculosis]
Length = 301
Score = 113 bits (280), Expect = 3e-24
Identities = 67/215 (31%), Positives = 111/215 (51%), Gaps = 6/215 (2%)
Query: 3 TYIIETKELTKFFGK--RNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYG 60
T +I + LT + K V + V +G ++G LGP+GAGK+TT K+L G L+ G
Sbjct: 15 TEVIRVRGLTFRYPKAAEPAVRGMEFTVGRGEIFGLLGPSGAGKSTTQKLLIGLLRDHGG 74
Query: 61 EIKIIGMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQAREL 120
+ + E +G E P Y +T +E L + L A +L
Sbjct: 75 QATVWDKEPAEWGPDYYERIGVSFELPNHYQKLTGYENLRFFASLYA----GATADPMQL 130
Query: 121 MAYTGVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKIL 180
+A G+ A + + S G + R+ FA +L+ DPELL LDEPTS LDP+ + I+
Sbjct: 131 LAAVGLADDAHTLVGKYSKGMQMRLPFARSLINDPELLFLDEPTSGLDPVNARKIKDIIV 190
Query: 181 ELAKSGKTVFISSHIVSEIERMCNYVGLIKDGQLI 215
+L G+T+F+++H ++ + +C+ V + DG+++
Sbjct: 191 DLKARGRTIFLTTHDMATADELCDRVAFVVDGRIV 225
>gb|AAF33771.1|AF219259_4 (AF219259) YhbG [Haemophilus ducreyi]
Length = 241
Score = 113 bits (280), Expect = 3e-24
Identities = 69/223 (30%), Positives = 121/223 (53%), Gaps = 9/223 (4%)
Query: 1 MPTYIIETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYG 60
MPT E L K + R VV +++L V G + G LGPNGAGKTTT M+ G ++ G
Sbjct: 1 MPTLYAE--HLAKSYKNRQVVKDVSLNVKAGEIIGLLGPNGAGKTTTFYMVVGLVRHDQG 58
Query: 61 EIKIIGMEMP----RERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLL-GLPKDKAVN 115
+I+I ++ +R K +GY+P+ + +++++ L+ + ++ L + +
Sbjct: 59 KIRIDDQDISVLPMHDRAKY--GIGYLPQEASIFHRLSVYDNLMAVLQVRKDLNNQQRKD 116
Query: 116 QARELMAYTGVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEF 175
+A EL++ + + N + LS G+R+RV A AL +P+ ++LDEP + +DP+ ++
Sbjct: 117 RAEELISEFHIEHIRDNLGQALSGGERRRVEIARALAANPQFILLDEPFAGVDPISVIDI 176
Query: 176 IGKILELAKSGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQG 218
I+ L + G V I+ H V E +C ++ GQ+I G
Sbjct: 177 KKIIVHLKQRGLGVLITDHNVRETLNVCQRAYIVGSGQMIANG 219
>emb|CAC08315.1| (AL392149) putative ABC transport system ATP-binding protein
[Streptomyces coelicolor A3(2)]
Length = 336
Score = 113 bits (280), Expect = 3e-24
Identities = 76/289 (26%), Positives = 146/289 (50%), Gaps = 3/289 (1%)
Query: 4 YIIETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIK 63
+ + + L K +G + + +L V +G V+G LGPNGAGKTT +++L+ ++ G +
Sbjct: 5 HAVRAEGLEKRYGDKRALDGFDLTVREGTVHGLLGPNGAGKTTAVRILSTLIRLDGGRAE 64
Query: 64 IIGMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMAY 123
+ G+++ R+ ++ +G + + +T + L GRL L +A +A EL+
Sbjct: 65 VAGLDIARQAREVRARIGLTGQYAAVDEVLTGRQNLEMFGRLFHLGGRRARARAVELLEQ 124
Query: 124 TGVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILELA 183
+ A + + S G R+R+ A++++ P +L LDEPT+ LDP R E + EL
Sbjct: 125 FDLTDAADRGVGKYSGGMRRRLDLAASMILAPSVLFLDEPTTGLDPRSRGEVWESVRELV 184
Query: 184 KSGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAKIESTD-YDVVVSDNEKLL 242
SG TV +++ + E +++ + + +I G+ I L + D +VVV+D+ ++
Sbjct: 185 ASGTTVLLTTQYLEEADKLASRITVIDRGRAIADDTPDGLKNLVGGDRIEVVVADHAEIP 244
Query: 243 KFLRD--KIYVREVWEEEGIVRVKLDERFSEKFFLELPAFLASEKLAIK 289
+ ++ ++ E EE +RV E+ L E +A++
Sbjct: 245 RVVKTVARVCKGEPEVEEEALRVHAPVTDRVPALTEVARTLQDEGVAVE 293
>gi|5915658 ATP-binding cassette, sub-family A member 1; ATP-binding cassette 1;
high density lipoprotein deficiency, Tangier type, 1;
cholesterol efflux regulatory protein [Homo sapiens]
>gi|8927983|sp|O95477|ABC1_HUMAN ATP-BINDING CASSETTE,
SUB-FAMILY A, MEMBER 1 (ATP-BINDING CASSETTE TRANSPORTER
1) (ATP-BINDING CASSETTE 1) (ABC-1) (CHOLESTEROL EFFLUX
REGULATORY PROTEIN) >gi|4128033|emb|CAA10005.1|
(AJ012376) ATP-binding cassette transporter-1 (ABC-1)
[Homo sapiens] >gi|5734101|gb|AAD49849.1|AF165281_1
(AF165281) ATP cassette binding transporter 1 [Homo
sapiens]
Length = 2201
Score = 113 bits (279), Expect = 4e-24
Identities = 76/254 (29%), Positives = 131/254 (50%), Gaps = 9/254 (3%)
Query: 2 PTYI---IETKELTKFF--GKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALK 56
PT++ + + L K + G + V L L +G + FLG NGAGKTTT+ +LTG
Sbjct: 832 PTHLKLGVSIQNLVKVYRDGMKVAVDGLALNFYEGQITSFLGHNGAGKTTTMSILTGLFP 891
Query: 57 PTYGEIKIIGMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQ 116
PT G I+G ++ E I +N+G P+ + +D +T+ E + + RL GL + +
Sbjct: 892 PTSGTAYILGKDIRSEMSTIRQNLGVCPQHNVLFDMLTVEEHIWFYARLKGLSEKHVKAE 951
Query: 117 ARELMAYTGVGRLAF-NKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEF 175
++ G+ +K +LS G ++++ A A +G +++ILDEPT+ +DP R
Sbjct: 952 MEQMALDVGLPSSKLKSKTSQLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYSR-RG 1010
Query: 176 IGKILELAKSGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAKIESTDY--DV 233
I ++L + G+T+ +S+H + E + + + + +I G+L G L T Y +
Sbjct: 1011 IWELLLKYRQGRTIILSTHHMDEADVLGDRIAIISHGKLCCVGSSLFLKNQLGTGYYLTL 1070
Query: 234 VVSDNEKLLKFLRD 247
V D E L R+
Sbjct: 1071 VKKDVESSLSSCRN 1084
Score = 111 bits (275), Expect = 1e-23
Identities = 67/233 (28%), Positives = 118/233 (49%), Gaps = 2/233 (0%)
Query: 5 IIETKELTKFFGKRN--VVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEI 62
I+E KELTK + ++ V + + +P G +G LG NGAGK++T KMLTG T G+
Sbjct: 1851 ILEIKELTKIYRRKRKPAVDRICVGIPPGECFGLLGVNGAGKSSTFKMLTGDTTVTRGDA 1910
Query: 63 KIIGMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMA 122
+ + ++ +N+GY P+ + +T E + + L G+P+ + +
Sbjct: 1911 FLNRNSILSNIHEVHQNMGYCPQFDAITELLTGREHVEFFALLRGVPEKEVGKVGEWAIR 1970
Query: 123 YTGVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILEL 182
G+ + S G ++++ A AL+G P ++ LDEPT+ +DP R L +
Sbjct: 1971 KLGLVKYGEKYAGNYSGGNKRKLSTAMALIGGPPVVFLDEPTTGMDPKARRFLWNCALSV 2030
Query: 183 AKSGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAKIESTDYDVVV 235
K G++V ++SH + E E +C + ++ +G+ G V+ L Y +VV
Sbjct: 2031 VKEGRSVVLTSHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTIVV 2083
>gb|AAF86276.1|AF275948_1 (AF275948) ABCA1 [Homo sapiens]
Length = 2261
Score = 113 bits (279), Expect = 4e-24
Identities = 76/254 (29%), Positives = 131/254 (50%), Gaps = 9/254 (3%)
Query: 2 PTYI---IETKELTKFF--GKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALK 56
PT++ + + L K + G + V L L +G + FLG NGAGKTTT+ +LTG
Sbjct: 892 PTHLKLGVSIQNLVKVYRDGMKVAVDGLALNFYEGQITSFLGHNGAGKTTTMSILTGLFP 951
Query: 57 PTYGEIKIIGMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQ 116
PT G I+G ++ E I +N+G P+ + +D +T+ E + + RL GL + +
Sbjct: 952 PTSGTAYILGKDIRSEMSTIRQNLGVCPQHNVLFDMLTVEEHIWFYARLKGLSEKHVKAE 1011
Query: 117 ARELMAYTGVGRLAF-NKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEF 175
++ G+ +K +LS G ++++ A A +G +++ILDEPT+ +DP R
Sbjct: 1012 MEQMALDVGLPSSKLKSKTSQLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYSR-RG 1070
Query: 176 IGKILELAKSGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAKIESTDY--DV 233
I ++L + G+T+ +S+H + E + + + + +I G+L G L T Y +
Sbjct: 1071 IWELLLKYRQGRTIILSTHHMDEADVLGDRIAIISHGKLCCVGSSLFLKNQLGTGYYLTL 1130
Query: 234 VVSDNEKLLKFLRD 247
V D E L R+
Sbjct: 1131 VKKDVESSLSSCRN 1144
Score = 111 bits (276), Expect = 8e-24
Identities = 67/233 (28%), Positives = 118/233 (49%), Gaps = 2/233 (0%)
Query: 5 IIETKELTKFFGKRN--VVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEI 62
I+E KELTK + ++ V + + +P G +G LG NGAGK++T KMLTG T G+
Sbjct: 1911 ILEIKELTKIYRRKRKPAVDRICVGIPPGECFGLLGVNGAGKSSTFKMLTGDTTVTRGDA 1970
Query: 63 KIIGMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMA 122
+ + ++ +N+GY P+ + +T E + + L G+P+ + +
Sbjct: 1971 FLNXNSILSNIHEVHQNMGYCPQFDAITELLTGREHVEFFALLRGVPEKEVGKVGEWAIR 2030
Query: 123 YTGVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILEL 182
G+ + S G ++++ A AL+G P ++ LDEPT+ +DP R L +
Sbjct: 2031 KLGLVKYGEKYAGNYSGGNKRKLSTAMALIGGPPVVFLDEPTTGMDPKARRFLWNCALSV 2090
Query: 183 AKSGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAKIESTDYDVVV 235
K G++V ++SH + E E +C + ++ +G+ G V+ L Y +VV
Sbjct: 2091 VKEGRSVVLTSHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTIVV 2143
>gb|AAF98175.1|AF285167_1 (AF285167) ATP-binding cassette transporter 1 [Homo sapiens]
Length = 2261
Score = 113 bits (279), Expect = 4e-24
Identities = 76/254 (29%), Positives = 131/254 (50%), Gaps = 9/254 (3%)
Query: 2 PTYI---IETKELTKFF--GKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALK 56
PT++ + + L K + G + V L L +G + FLG NGAGKTTT+ +LTG
Sbjct: 892 PTHLKLGVSIQNLVKVYRDGMKVAVDGLALNFYEGQITSFLGHNGAGKTTTMSILTGLFP 951
Query: 57 PTYGEIKIIGMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQ 116
PT G I+G ++ E I +N+G P+ + +D +T+ E + + RL GL + +
Sbjct: 952 PTSGTAYILGKDIRSEMSTIRQNLGVCPQHNVLFDMLTVEEHIWFYARLKGLSEKHVKAE 1011
Query: 117 ARELMAYTGVGRLAF-NKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEF 175
++ G+ +K +LS G ++++ A A +G +++ILDEPT+ +DP R
Sbjct: 1012 MEQMALDVGLPSSKLKSKTSQLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYSR-RG 1070
Query: 176 IGKILELAKSGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAKIESTDY--DV 233
I ++L + G+T+ +S+H + E + + + + +I G+L G L T Y +
Sbjct: 1071 IWELLLKYRQGRTIILSTHHMDEADVLGDRIAIISHGKLCCVGSSLFLKNQLGTGYYLTL 1130
Query: 234 VVSDNEKLLKFLRD 247
V D E L R+
Sbjct: 1131 VKKDVESSLSSCRN 1144
Score = 111 bits (275), Expect = 1e-23
Identities = 67/233 (28%), Positives = 118/233 (49%), Gaps = 2/233 (0%)
Query: 5 IIETKELTKFFGKRN--VVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEI 62
I+E KELTK + ++ V + + +P G +G LG NGAGK++T KMLTG T G+
Sbjct: 1911 ILEIKELTKIYRRKRKPAVDRICVGIPPGECFGLLGVNGAGKSSTFKMLTGDTTVTRGDA 1970
Query: 63 KIIGMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMA 122
+ + ++ +N+GY P+ + +T E + + L G+P+ + +
Sbjct: 1971 FLNKNSILSNIHEVHQNMGYCPQFDAITELLTGREHVEFFALLRGVPEKEVGKVGEWAIR 2030
Query: 123 YTGVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILEL 182
G+ + S G ++++ A AL+G P ++ LDEPT+ +DP R L +
Sbjct: 2031 KLGLVKYGEKYAGNYSGGNKRKLSTAMALIGGPPVVFLDEPTTGMDPKARRFLWNCALSV 2090
Query: 183 AKSGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAKIESTDYDVVV 235
K G++V ++SH + E E +C + ++ +G+ G V+ L Y +VV
Sbjct: 2091 VKEGRSVVLTSHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTIVV 2143
>gi|11429275 ATP-binding cassette, sub-family A member 1 [Homo sapiens]
Length = 2231
Score = 113 bits (279), Expect = 4e-24
Identities = 76/254 (29%), Positives = 131/254 (50%), Gaps = 9/254 (3%)
Query: 2 PTYI---IETKELTKFF--GKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALK 56
PT++ + + L K + G + V L L +G + FLG NGAGKTTT+ +LTG
Sbjct: 862 PTHLKLGVSIQNLVKVYRDGMKVAVDGLALNFYEGQITSFLGHNGAGKTTTMSILTGLFP 921
Query: 57 PTYGEIKIIGMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQ 116
PT G I+G ++ E I +N+G P+ + +D +T+ E + + RL GL + +
Sbjct: 922 PTSGTAYILGKDIRSEMSTIRQNLGVCPQHNVLFDMLTVEEHIWFYARLKGLSEKHVKAE 981
Query: 117 ARELMAYTGVGRLAF-NKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEF 175
++ G+ +K +LS G ++++ A A +G +++ILDEPT+ +DP R
Sbjct: 982 MEQMALDVGLPSSKLKSKTSQLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYSR-RG 1040
Query: 176 IGKILELAKSGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAKIESTDY--DV 233
I ++L + G+T+ +S+H + E + + + + +I G+L G L T Y +
Sbjct: 1041 IWELLLKYRQGRTIILSTHHMDEADVLGDRIAIISHGKLCCVGSSLFLKNQLGTGYYLTL 1100
Query: 234 VVSDNEKLLKFLRD 247
V D E L R+
Sbjct: 1101 VKKDVESSLSSCRN 1114
Score = 111 bits (274), Expect = 1e-23
Identities = 67/233 (28%), Positives = 118/233 (49%), Gaps = 2/233 (0%)
Query: 5 IIETKELTKFFGKRN--VVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEI 62
I+E KELTK + ++ V + + +P G +G LG NGAGK++T KMLTG T G+
Sbjct: 1881 ILEIKELTKIYRRKRKPAVDRICVGIPPGECFGLLGVNGAGKSSTFKMLTGDTTVTRGDA 1940
Query: 63 KIIGMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMA 122
+ + ++ +N+GY P+ + +T E + + L G+P+ + +
Sbjct: 1941 FLNICSILSNIHEVHQNMGYCPQFDAITELLTGREHVEFFALLRGVPEKEVGKVGEWAIR 2000
Query: 123 YTGVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILEL 182
G+ + S G ++++ A AL+G P ++ LDEPT+ +DP R L +
Sbjct: 2001 KLGLVKYGEKYAGNYSGGNKRKLSTAMALIGGPPVVFLDEPTTGMDPKARRFLWNCALSV 2060
Query: 183 AKSGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAKIESTDYDVVV 235
K G++V ++SH + E E +C + ++ +G+ G V+ L Y +VV
Sbjct: 2061 VKEGRSVVLTSHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTIVV 2113
>pir||G75169 abc transporter ATP-binding protein PAB0350 - Pyrococcus abyssi
(strain Orsay) >gi|5457948|emb|CAB49438.1| (AJ248284)
ABC TRANSPORTER ATP-BINDING PROTEIN [Pyrococcus abyssi]
Length = 260
Score = 112 bits (278), Expect = 5e-24
Identities = 76/232 (32%), Positives = 119/232 (50%), Gaps = 13/232 (5%)
Query: 4 YIIETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIK 63
Y+IE + LT + V L K+ KG LGPNGAGKTT +++L G G+I
Sbjct: 3 YVIEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKIL 62
Query: 64 IIGMEMPRERVKIMRNVGYMPER-------PLAYDDMTIFEFLVYMGRLLGLPKDKAVNQ 116
+ G R K V Y+P+ PL+ D+ L G + + + +
Sbjct: 63 VFGKSPSEVREK----VAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLIHFNIPQEVIKR 118
Query: 117 ARELMAYTGVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFI 176
E++ + G+ +A ELS GQ+QRV+ A ALM +PELL+LDEP S LDP R+E
Sbjct: 119 GLEILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEAT 178
Query: 177 GKILELAKS-GKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAKIE 227
+ ++ + G T+ I++H V+ + + + V LI D +L+ G ++ + E
Sbjct: 179 STLSKIKEDMGITMIITTHDVNPLIEIGDKVMLI-DRKLVAFGSPEEVLRDE 229
>pir||G75200 cobalt abc transporter, ATP-binding protein (cbio) PAB2260 -
Pyrococcus abyssi (strain Orsay)
>gi|5457563|emb|CAB49054.1| (AJ248283) cobalt ABC
transporter, ATP-binding protein (cbiO) [Pyrococcus
abyssi]
Length = 260
Score = 112 bits (277), Expect = 6e-24
Identities = 77/255 (30%), Positives = 138/255 (53%), Gaps = 5/255 (1%)
Query: 5 IIETKELTKFFGK-RNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIK 63
+IE K++ ++ + V+ ++N + KG +GPNG+GKTT +KM+ G LKP G++
Sbjct: 1 MIEFKDVWFWYDDGKYVLKSINFRF-KGGTLAIVGPNGSGKTTLVKMMNGLLKPKKGDVI 59
Query: 64 IIGMEMPRERVKIM-RNVGYMPERPLA-YDDMTIFEFLVYMGRLLGLPKDKAVNQARELM 121
I G+ + V M R VGY+ + P A + + +F+ + + R LGL +++ + R +
Sbjct: 60 IDGINTRDKSVAEMSRLVGYVFQNPDAMFFEENVFKEVAFGPRNLGLSEEEVEKRVRWAL 119
Query: 122 AYTGVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILE 181
G+ ELS G++QR+ A L P+ L+LDEP + LD G I I +
Sbjct: 120 REVGLEGFEDRSPLELSGGEKQRLAIACILAMKPKYLVLDEPNTGLDERGLRGLINVIRK 179
Query: 182 LAKSGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAKIESTDYDVVVSDNEKL 241
L + ++ + +H + + + + V L+KDG++ G V D K++ ++ +V + K+
Sbjct: 180 LREDNHSIILVTHDMELVLEVADEVLLLKDGEIKFFGPVEDFFKLDLRNFSLVEPEIIKI 239
Query: 242 LKFLRDKIYVREVWE 256
K L+ + +VR V E
Sbjct: 240 AKELKLR-FVRNVDE 253
>gi|11499200 spermidine/putrescine ABC transporter, ATP-binding protein (potA)
[Archaeoglobus fulgidus] >gi|7445763|pir||G69450
spermidine/putrescine ABC transporter, ATP-binding
protein (potA) homolog - Archaeoglobus fulgidus
>gi|2648948|gb|AAB89638.1| (AE000991)
spermidine/putrescine ABC transporter, ATP-binding
protein (potA) [Archaeoglobus fulgidus]
Length = 345
Score = 111 bits (276), Expect = 8e-24
Identities = 78/269 (28%), Positives = 140/269 (51%), Gaps = 13/269 (4%)
Query: 1 MPTYIIETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYG 60
M Y +E + ++K + V+ ++NL++ +G + LGP+G+GKTT I+++ G P G
Sbjct: 1 MVGYAVELEGISKSYDSTTVLEDINLRIQQGEFFSLLGPSGSGKTTIIRIIAGLTFPDQG 60
Query: 61 EIKIIGME---MPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQA 117
++I G + +P R RNVG + + + + +FE + Y RL +P+ + ++
Sbjct: 61 FVRINGEDCTSLPPYR----RNVGMVFQNLALFPHLNVFENVAYGLRLRKIPEGEIKDRV 116
Query: 118 RELMAYTGVGR--LAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEF 175
+ + A K+E+LS GQ+QRV A AL+ +P +L+LDEP LD R
Sbjct: 117 YRYLELVNLDPEIYAKRKVEQLSGGQQQRVAIARALVTEPSILLLDEPLGALDLKIRQHM 176
Query: 176 IGKILELAKSGKTVFI-SSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAKIESTDYDVV 234
I ++ + K+ T FI +H SE + + + ++ +G++ + G R++ + T +
Sbjct: 177 ISELKRIQKTLGTTFIYVTHDQSEALLLSDRLAVLNEGRIHQIGTPREIYERPKTRF--- 233
Query: 235 VSDNEKLLKFLRDKIYVREVWEEEGIVRV 263
V+ FL ++ EV E G VRV
Sbjct: 234 VASFIGETNFLEARVVNGEVITEIGKVRV 262
>pir||A71357 probable ABC transporter, ATP-binding protein (troB) - syphilis
spirochete >gi|1777934|gb|AAC45726.1| (U55214) TroB
[Treponema pallidum] >gi|3322432|gb|AAC65154.1|
(AE001201) ABC transporter, ATP-binding protein (troB)
[Treponema pallidum]
Length = 266
Score = 111 bits (275), Expect = 1e-23
Identities = 68/224 (30%), Positives = 119/224 (52%), Gaps = 13/224 (5%)
Query: 4 YIIETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIK 63
Y ++ +LT + ++ V++++++++P+G + +GPNGAGK+T +K + G L GE++
Sbjct: 9 YAVQVDDLTLAYRQKPVLWDVDVRIPEGVIEAIIGPNGAGKSTLLKAIMGLLPLASGEVR 68
Query: 64 IIGMEMPRERVKIMRNVGYMPERPLAYDDM--TIFEFLVYMGRLLGL-----PKDKAVNQ 116
+ G +ER R V Y+P+R D T+F+ +V MG L P + +
Sbjct: 69 VFGRPFSKER----RRVAYVPQRSAVDWDFPTTVFD-VVLMGSYGSLGWILRPGKREKAR 123
Query: 117 ARELMAYTGVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFI 176
ARE + G+G +I ELS GQ+QRV A AL+ D +L +DEP +D +
Sbjct: 124 AREAIEEVGMGAFLDRQISELSGGQQQRVFLARALVQDADLYFMDEPFQGVDAATEQAIV 183
Query: 177 GKILELAKSGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKV 220
+ L GKT+ + H + + + V L+ + ++I +G V
Sbjct: 184 TLLKTLKGRGKTLLVVHHDLQTVAEYFDRV-LLLNVRVIAEGAV 226
>gb|AAD17957.1| (AF106002) toluene tolerance protein Ttg2A [Pseudomonas putida]
Length = 269
Score = 111 bits (275), Expect = 1e-23
Identities = 70/251 (27%), Positives = 136/251 (53%), Gaps = 20/251 (7%)
Query: 4 YIIETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIK 63
Y +E K +T G R++ N+++++P+G V G +GP+G GKTT ++++ L+P+ GE+
Sbjct: 7 YAVELKGVTFKRGSRSIFSNVDIRIPRGKVTGIMGPSGCGKTTLLRLMGAQLRPSSGEVW 66
Query: 64 IIGMEMP----RERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARE 119
+ G +P + + +G + + + D+ +FE + + R+ D+ +
Sbjct: 67 VAGQNLPTLSRSDLFDARKQMGVLFQSGALFTDLDVFENVAFPLRVHTQLSDEMIRDI-V 125
Query: 120 LMAYTGVG-RLAFNKI-EELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIG 177
LM VG R A + + +ELS G ++RV A A+ DP++L+ DEP DP+ M +
Sbjct: 126 LMKLQAVGLRGAIDLMPDELSGGMKRRVALARAIALDPQILMYDEPFVGQDPIA-MGVLV 184
Query: 178 KILELAKS--GKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAKIESTDYDVVV 235
+++ L G T + SH ++E + +Y+ ++ DGQ++ QG T +++
Sbjct: 185 RLIRLLNDALGITSIVVSHDLAETASIADYIYVVGDGQVLGQG----------TPDELMG 234
Query: 236 SDNEKLLKFLR 246
SDN ++ +F++
Sbjct: 235 SDNPRIRQFMK 245
>pir||E70871 hypothetical protein Rv1458c - Mycobacterium tuberculosis (strain
H37RV) >gi|2791392|emb|CAA15988.1| (AL021184)
hypothetical protein Rv1458c [Mycobacterium
tuberculosis]
Length = 313
Score = 111 bits (274), Expect = 1e-23
Identities = 68/229 (29%), Positives = 112/229 (48%), Gaps = 5/229 (2%)
Query: 2 PTYIIETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGE 61
P ++ + + K +G V NL+L V V LGPNGAGKTTT++M G ++P G
Sbjct: 8 PEVVLRLRGVCKRYGSITAVSNLDLDVHDAEVMALLGPNGAGKTTTVEMCEGFVRPDAGS 67
Query: 62 IKIIGMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELM 121
I+++G++ + ++ +G M + Y E L + P D L+
Sbjct: 68 IEVLGLDPITDNARLRARIGVMLQGGGGYPAARAGEMLDLVASYAANPLD-----PHWLL 122
Query: 122 AYTGVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILE 181
G+ A LS GQ+QR+ A AL+G P+L+ LDEPT+ +D R+ I
Sbjct: 123 DTLGLTEAARTTYRRLSGGQQQRLALACALVGRPQLVFLDEPTAGMDAHARVLVWELIDA 182
Query: 182 LAKSGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAKIESTD 230
L + G TV +++H + E E + + + +I G + G +L + + D
Sbjct: 183 LRRDGVTVVLTTHHLKEAEELADRLVIIDHGVTVAAGTPAELMRSGAKD 231
>gb|AAF23811.1|AF213822_26 (AF213822) ABC binding protein [Zymomonas mobilis]
Length = 298
Score = 111 bits (274), Expect = 1e-23
Identities = 80/286 (27%), Positives = 140/286 (47%), Gaps = 13/286 (4%)
Query: 11 LTKFFGKRNVVYNLN---LKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEI---KI 64
++K + +N V+ LN L VP G ++G LGPNGAGK+T + ++ +P G I +I
Sbjct: 7 VSKIYPGKNPVHALNNVSLNVPSG-IFGLLGPNGAGKSTLMSIIATLQRPDRGSIHLGEI 65
Query: 65 IGMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGL-PKDKAVNQARELMAY 123
PRE + +GY+P+ Y + E L Y RL G+ + +Q L+
Sbjct: 66 DAFASPRE---MRAKLGYLPQDFGTYPGASAEELLHYFARLKGISTAAEREHQIGTLLEM 122
Query: 124 TGVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILELA 183
+ + + S G RQR A AL+G P+LLI+ EPT+ LDP R F +IL
Sbjct: 123 VNLDAAKNRPVSDYSGGMRQRFGVAQALLGHPKLLIVVEPTAGLDPAERNRF-NQILANI 181
Query: 184 KSGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAKIESTDYDVVVSDNEKLLK 243
+ +S+HI+ ++ +C + +I G+++ +G L S + D E+ +
Sbjct: 182 GENTAIILSTHIIEDVSNLCRRIAVINQGRIMAEGDPEKLTASLSGQLWQALVDRERADQ 241
Query: 244 FLRD-KIYVREVWEEEGIVRVKLDERFSEKFFLELPAFLASEKLAI 288
+ ++ R + +V ++ + + +E F ++P F + LA+
Sbjct: 242 ISKSGQLVFRRIHRGLHLVVIQSETQPAEDFTPKIPDFEDAYFLAV 287
>pir||E71045 probable ABC transporter - Pyrococcus horikoshii
>gi|3258082|dbj|BAA30765.1| (AP000006) 260aa long
hypothetical ABC transporter [Pyrococcus horikoshii]
Length = 260
Score = 110 bits (273), Expect = 2e-23
Identities = 69/215 (32%), Positives = 117/215 (54%), Gaps = 14/215 (6%)
Query: 4 YIIETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIK 63
Y+IE K+LT + N V +L K+ +G LGPNGAGKTT +++L G G +K
Sbjct: 3 YVIEAKDLTIMYNGVNAVEDLTFKLKRGETLLLLGPNGAGKTTLLRVLAGFHTEYKGYLK 62
Query: 64 IIGMEMPRERVKIMRNVGYMPER-------PLAYDDMTIFEFLVYMGRL-LGLPKDKAVN 115
+ G + +++ V Y+P+ PL+ D+ + G + +P++ +
Sbjct: 63 VFG----KSPLEVKDRVAYVPQTFSINSRVPLSVLDVVAMGAIYKRGIVHFNVPRE-VIK 117
Query: 116 QARELMAYTGVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEF 175
+ +++ + G+ L+ ELS GQ+QRV+ A ALM +PELL+LDEP S LDP R+E
Sbjct: 118 KGIKVLEFLGLKDLSSRSFRELSGGQKQRVIIARALMSEPELLLLDEPLSALDPKARLEV 177
Query: 176 IGKILEL-AKSGKTVFISSHIVSEIERMCNYVGLI 209
+ + K G ++ I++H ++ + + + V LI
Sbjct: 178 TSVLSRIKEKFGISMIITTHDINPLAEIGDKVMLI 212
>pir||T07716 probable ABC-type transport protein T23J7.100 - Arabidopsis
thaliana >gi|4741194|emb|CAB41860.1| (AL049746) ABC
transporter-like protein [Arabidopsis thaliana]
Length = 722
Score = 110 bits (273), Expect = 2e-23
Identities = 80/281 (28%), Positives = 147/281 (51%), Gaps = 33/281 (11%)
Query: 21 VYNLNLKVPKGAVYGFLGPNGAGKTTTIKM--------------LTGALKPTYGEIKIIG 66
V L+L VP G +G LGPNGAGKT+ I M +TG +KP+ G + G
Sbjct: 413 VCGLSLAVPSGECFGMLGPNGAGKTSFINMVSTQRDIYTNLLCLMTGLVKPSSGSAFVQG 472
Query: 67 MEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARE------L 120
+++ ++ K+ ++G P+ L ++ +T E L++ GRL L K +NQA E
Sbjct: 473 LDICKDMDKVYISMGVCPQHDLLWETLTGKEHLLFYGRLKNL-KGHDLNQAVEESLKSVN 531
Query: 121 MAYTGVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKIL 180
+ + GV + K S G ++R+ A +L+G P+++ +DEP++ LDP R+ + ++
Sbjct: 532 LFHGGVADIPAGK---YSGGMKRRLSVAISLIGSPKVVYMDEPSTGLDPASRIN-LWTVI 587
Query: 181 ELAKSGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAKIESTDYDVVVS---D 237
+ AK + +++H + E E +C+ +G+ DG+L G ++L Y + ++ +
Sbjct: 588 KRAKKHAAIILTTHSMEEAEFLCDRLGIFVDGRLQCIGNPKELKGRYGGSYVLTITTSPE 647
Query: 238 NEKLLKFLRDKI--YVREVWEEEGIVRV---KLDERFSEKF 273
+EK ++ L ++ R+++ G + K + R SE F
Sbjct: 648 HEKDVETLVQEVSSNARKIYHIAGTQKFEFPKEEVRISEVF 688
>pir||C69992 ABC transporter (ATP-binding protein) homolog ytgB - Bacillus
subtilis >gi|2293152|gb|AAC00230.1| (AF008220) putative
transporter [Bacillus subtilis]
>gi|2635560|emb|CAB15054.1| (Z99119) similar to ABC
transporter (ATP-binding protein) [Bacillus subtilis]
Length = 250
Score = 110 bits (272), Expect = 2e-23
Identities = 77/250 (30%), Positives = 129/250 (50%), Gaps = 16/250 (6%)
Query: 6 IETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIKII 65
+E +T + K+ V+ +++L+VP+G + G +GPNGAGK+T IK + G + G+I I
Sbjct: 4 VELDNVTVAYHKKPVLQDISLQVPEGKLIGIIGPNGAGKSTLIKTILGLVPRASGDISIY 63
Query: 66 GMEMPRERVKIMRNVGYMPER-PLAYDDMTIFEFLVYMGR-----LLGLPKDKAVNQARE 119
G + +R +I GY+P+R + +D T +V MGR LL PK V A+
Sbjct: 64 GKDYKDQRTRI----GYVPQRGSVDWDFPTSPLDVVLMGRYGRIGLLKRPKKADVEMAKA 119
Query: 120 LMAYTGVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKI 179
+ G+ A +I +LS GQ+QRV A AL + ++ +DEP + +D + +
Sbjct: 120 ALTKVGMHDYAKRQISQLSGGQQQRVFLARALCQNADIYFMDEPFAGVDAATERAIMTLL 179
Query: 180 LELAKSGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAKIESTDYDVVVSDNE 239
EL + GKTV + H + E +++ L+ + I G ++ IE+ +
Sbjct: 180 AELKEKGKTVLVVHHDLQTAEDYFDWI-LLLHLRKIAFGPTENVFTIEN-----LQKTYG 233
Query: 240 KLLKFLRDKI 249
L FL+DK+
Sbjct: 234 GRLTFLKDKV 243
>gi|10956099 ABC transporter subunit PenJ [Pediococcus pentosaceus]
>gi|10956122|ref|NP_037574.1| putative ABC transporter
ATP-binding subunit [Pediococcus pentosaceus]
>gi|4587878|gb|AAD25904.1|AF069302_13 (AF069302) ABC
transporter subunit PenJ [Pediococcus pentosaceus]
>gi|5091680|gb|AAD39627.1|AF033858_10 (AF033858)
putative ABC transporter ATP-binding subunit
[Pediococcus pentosaceus]
Length = 292
Score = 109 bits (270), Expect = 4e-23
Identities = 72/252 (28%), Positives = 130/252 (51%), Gaps = 18/252 (7%)
Query: 5 IIETKELTKFFGKRNVVYNLNLKVP-KGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIK 63
++E +T F + + N++L++ + V +GPNGAGKTT IK + G + G I
Sbjct: 3 LLEINNITMKFPMKVALDNISLEISDESGVTALIGPNGAGKTTLIKCIMGLNQEYEGSI- 61
Query: 64 IIGMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMAY 123
V + Y P+ P ++T E + L ++ ++ AR+L+
Sbjct: 62 ----------VYQTNKISYCPDTPFFDTNLTAIEVMQQSAALSS--QNYELHSARKLLKM 109
Query: 124 TGVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILELA 183
G+ I S G QR+ A++L+ DPE+LILDEPTS LDP G+ + + K+++
Sbjct: 110 VGLDEARDRFINGFSRGMLQRLGIAASLILDPEVLILDEPTSALDPAGQRDIL-KLIKTI 168
Query: 184 KSGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAKIESTDYDVVVSDNEKLLK 243
+ V +SSH + ++E++ + + ++ +G+L+ G +RD +ES + + S +E L +
Sbjct: 169 SKDRAVIVSSHNLKDMEQIADNLIVLNEGKLVYAGNLRDFIDLESIESVLKCSTSENLNR 228
Query: 244 ---FLRDKIYVR 252
LR + +R
Sbjct: 229 LTILLRPNVPIR 240
>pir||D82147 amino acid ABC transporter, ATP-binding protein VC1864 [imported] -
Vibrio cholerae (group O1 strain N16961)
>gi|9656394|gb|AAF95012.1| (AE004262) amino acid ABC
transporter, ATP-binding protein [Vibrio cholerae]
Length = 256
Score = 109 bits (270), Expect = 4e-23
Identities = 76/255 (29%), Positives = 131/255 (50%), Gaps = 24/255 (9%)
Query: 6 IETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEI--- 62
+E K L K FG+ V+ ++L+ KG V +G +G+GK+T ++ + PT GEI
Sbjct: 7 LEIKNLHKTFGQNEVLKGISLQAQKGDVISIIGSSGSGKSTFLRCINLLETPTAGEIWVK 66
Query: 63 -KIIGMEMPRERV----------KIMRNVGYMPERPLAYDDMTIFEFLVYMG-RLLGLPK 110
++I M+ R+ +I + + + + MT+ E ++ +LG+PK
Sbjct: 67 GELIQMKTTRQGTVQPAKEKQVQRIRSRLAMVFQSFNLWSHMTVLENVIEAPVHVLGVPK 126
Query: 111 DKAVNQARELMAYTGVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPL 170
+A+ QA L+ G+ LS GQ+QR A AL +PE+++ DEPTS LDP
Sbjct: 127 AQAIEQAERLLRKVGLYERKDYYPGHLSGGQQQRAAIARALAVEPEVMLFDEPTSALDPE 186
Query: 171 GRMEFIGKILELAKSGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAKIESTD 230
E +G + +LA+ G+T+ + +H ++ + N+V + G++ EQGK L K
Sbjct: 187 LVGEVLGVMRDLAEEGRTMLVVTHEMAFARDVSNHVMFLHQGKVEEQGKPEKLFK----- 241
Query: 231 YDVVVSDNEKLLKFL 245
D+E+L +F+
Sbjct: 242 ----NPDSERLKQFI 252
>dbj|BAB10073.1| (AB010069) contains similarity to ABC transporter~gene_id:MAC9.4
[Arabidopsis thaliana]
Length = 950
Score = 109 bits (270), Expect = 4e-23
Identities = 79/273 (28%), Positives = 138/273 (49%), Gaps = 16/273 (5%)
Query: 19 NVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIKIIGMEMPRERV---K 75
+ V L + + K ++ LGPNGAGKTTTI LTG T G+ KI G + R V
Sbjct: 547 HAVKGLWMNIAKDQLFCLLGPNGAGKTTTISCLTGINPVTGGDAKIYGNSI-RSSVGMSN 605
Query: 76 IMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMAYTGVGRLAFNKIE 135
I + +G P+ + +D ++ E L + GLP + A +L+ + A +
Sbjct: 606 IRKMIGVCPQFDILWDALSSEEHLHLFASIKGLPPSSIKSIAEKLLVDVKLTGSAKIRAG 665
Query: 136 ELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILELAKSGKTVFISSHI 195
S G ++R+ A AL+GDP+L+ LDEPT+ +DP+ R + I++ +K G+ + +++H
Sbjct: 666 SYSGGMKRRLSVAIALIGDPKLVFLDEPTTGMDPITR-RHVWDIIQESKKGRAIILTTHS 724
Query: 196 VSEIERMCNYVGLIKDGQLIEQGKVRDLAKIESTDYDVVVS--DNEK------LLKFLRD 247
+ E + + + +G++ G+L G L T + VS +N+K L +F ++
Sbjct: 725 MEEADILSDRIGIMAKGRLRCIGTSIRLKSRFGTGFVATVSFIENKKDGAPEPLKRFFKE 784
Query: 248 KIYVREVWEEEGIVRVKL---DERFSEKFFLEL 277
++ V E + + + E+ + FF EL
Sbjct: 785 RLKVEPTEENKAFMTFVIPHDKEQLLKGFFAEL 817
>pir||S77512 ABC-type transport protein slr1901 - Synechocystis sp. (strain PCC
6803) >gi|1652437|dbj|BAA17359.1| (D90905) ABC
transporter [Synechocystis sp.]
Length = 326
Score = 109 bits (269), Expect = 5e-23
Identities = 84/292 (28%), Positives = 141/292 (47%), Gaps = 10/292 (3%)
Query: 21 VYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIKIIGMEMPRERVKIMRNV 80
V +++ +P GA+ GFLG NGAGKTTT+KMLTG +KP+ G++++ G + R + +R
Sbjct: 36 VQDISFTIPPGAMVGFLGANGAGKTTTLKMLTGLIKPSGGKVRVAGFDPFRRQTAFLRRT 95
Query: 81 G-YMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMAYTGVGRLAFNKIEELSS 139
M ++ D+ + L G + +P + EL + + +LS
Sbjct: 96 SLVMGQKQQLIWDLPTLDSLRINGAIYEIPDQVFEQRLGELSEMLDLTTELKQPVRKLSL 155
Query: 140 GQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILELAKSGK-TVFISSHIVSE 198
GQR + +AL+ P +L LDEPT LD ++ + E + + TV ++SH +++
Sbjct: 156 GQRMKAELLAALLHHPTVLFLDEPTLGLDVNAQVAVRRFLQEYNRRYQATVLLTSHYMAD 215
Query: 199 IERMCNYVGLIKDGQLIEQGKVRDLAKIESTDYDVVVSDNEKLLKFLRDKIYVREVWEEE 258
I +C V LI GQL+ G + L + + Y V + + + ++Y EV E
Sbjct: 216 ITTLCERVLLIHQGQLMYDGDLEALVE-RFSPYRQVAVELSAPIPLEKLQLY-GEVESVE 273
Query: 259 G-IVRVKLDERFSEKFFLELPAFLASEKLAIKLFKPHTSPLERILMKRFNMG 309
G +VR L +L A L L++ P+E I+ + F+ G
Sbjct: 274 GLLVRFLLKRESLTTAIAKLLAELPVSDLSVS-----DPPIEEIIGRLFSQG 320
>pir||H69999 ABC transporter (ATP-binding protein) homolog ytrB - Bacillus
subtilis >gi|2293170|gb|AAC00248.1| (AF008220)
transporter [Bacillus subtilis]
>gi|2635529|emb|CAB15023.1| (Z99119) similar to ABC
transporter (ATP-binding protein) [Bacillus subtilis]
Length = 292
Score = 108 bits (267), Expect = 9e-23
Identities = 85/298 (28%), Positives = 151/298 (50%), Gaps = 41/298 (13%)
Query: 5 IIETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIKI 64
+IE ++L+K V+ +++L + KG ++G LG NG+GKTT ++++ + G I
Sbjct: 1 MIELRQLSKAIDGNQVLKDVSLTIEKGEIFGLLGRNGSGKTTMLRLIQQIIFADSGTILF 60
Query: 65 IGMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMAYT 124
G+E+ ++ K+ +N+ YMP + YD T + + + R+ PK V A ELM
Sbjct: 61 DGVEI-KKHPKVKQNIIYMPVQNPFYDKYTYKQLVDILRRI--YPKFD-VTYANELMNRY 116
Query: 125 GVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKIL-ELA 183
+ K ELS+G ++++ + P L++LDEPT +D + R + + ++ E+A
Sbjct: 117 EIPET--KKYRELSTGLKKQLSLVLSFAARPALILLDEPTDGIDAVTRHDVLQLMVDEVA 174
Query: 184 KSGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAKIE--------STDYDVVV 235
+ ++ I+SH + +IERMCN +G ++D L V DL +++ + D DV +
Sbjct: 175 ERDTSILITSHRLEDIERMCNRIGFLEDNSLT---NVMDLDELKEEYIKIQMAFDTDVNL 231
Query: 236 SDNEKLLKFL----------------RDKIYVRE----VWEEEGIVRVKLDERFSEKF 273
+ E+ + L K ++RE VW E + V L+E F KF
Sbjct: 232 AIREQNIPMLDQAGVFYTVLIPKSDEEKKSFLRELKPKVWNE---LPVNLEEVFIAKF 286
>pir||G83245 probable ATP-binding component of ABC transporter PA3212 [imported]
- Pseudomonas aeruginosa (strain PAO1)
>gi|9949332|gb|AAG06600.1|AE004744_15 (AE004744)
probable ATP-binding component of ABC transporter
[Pseudomonas aeruginosa]
Length = 264
Score = 106 bits (263), Expect = 3e-22
Identities = 70/236 (29%), Positives = 127/236 (53%), Gaps = 10/236 (4%)
Query: 2 PTYIIETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGE 61
P II+ ++L FG + V +L+L V +G + G +G +G GK+ ++ + G +PT G
Sbjct: 6 PQAIIQVRDLCNRFGAQAVHEHLDLDVRRGEILGVVGGSGTGKSVLLRSIVGLRRPTSGS 65
Query: 62 IKIIG---MEMPRERVKIM-RNVGYMPERPLAYDDMTIFEFLVY-MGRLLGLPKDKAVNQ 116
+++ G +++P ER ++ R G + ++ + +T+ E + + GLP+ A +
Sbjct: 66 VRVFGEDLLQLPEERRSLVERRFGVLFQQGALFSSLTVVENVALPLIENAGLPRADAEHL 125
Query: 117 ARELMAYTGVGRLAFNKI-EELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEF 175
A+ +A G+ A +K LS G +R A AL DP++L LDEPT+ LDP+G F
Sbjct: 126 AQVKLALAGLPANAGDKYPASLSGGMIKRAALARALALDPDILFLDEPTAGLDPIGAAAF 185
Query: 176 IGKILELAKS-GKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAKIESTD 230
I L + G TVF+ +H + + +C+ V ++ +++ V L ++ +TD
Sbjct: 186 DNLIRTLRDALGLTVFLVTHDLDTLYTICDRVAVLSQKKVL---VVDTLERVAATD 238
>pir||A70180 spermidine/putrescine ABC transporter, ATP-binding protein (potA)
homolog - Lyme disease spirochete
>gi|2688562|gb|AAB91525.1| (AE001165)
spermidine/putrescine ABC transporter, ATP-binding
protein (potA) [Borrelia burgdorferi]
Length = 347
Score = 104 bits (258), Expect = 1e-21
Identities = 67/234 (28%), Positives = 117/234 (49%), Gaps = 4/234 (1%)
Query: 1 MPTYIIETKELTKFFGKRN--VVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPT 58
M I+E K L+ ++ + N+NLK+ K LGP+G GKTT IK+L G L
Sbjct: 1 MDNCILEIKNLSHYYDNNGNKTLDNINLKIKKNEFITLLGPSGCGKTTLIKILGGFLSQK 60
Query: 59 YGEIKIIGMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQAR 118
GEI E+ + R + + + + M +F+ + + R+ PKD + +
Sbjct: 61 NGEIYFFSKEISKTSPN-KREINTVFQNYALFPHMNVFDNISFGLRMKKTPKDIIKEKVK 119
Query: 119 ELMAYTGVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGK 178
++ G+ + A+ I ELS GQ+QRV A A++ +P+LL+LDEP S LD R E +
Sbjct: 120 TSLSLIGMPKYAYRNINELSGGQKQRVAIARAMVMEPKLLLLDEPLSALDLKMRQEMQKE 179
Query: 179 ILELAKS-GKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAKIESTDY 231
+ ++ + G T +H E M + + ++ +G +++ G ++ T +
Sbjct: 180 LKKIQRQLGITFIYVTHDQEEALTMSDRIVVMNEGIILQIGTPEEIYNEPKTKF 233
>pir||G75521 ABC transporter, ATP-binding protein - Deinococcus radiodurans
(strain R1) >gi|6458088|gb|AAF09986.1|AE001901_1
(AE001901) ABC transporter, ATP-binding protein
[Deinococcus radiodurans]
Length = 213
Score = 104 bits (258), Expect = 1e-21
Identities = 62/193 (32%), Positives = 102/193 (52%), Gaps = 6/193 (3%)
Query: 2 PTYIIETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGE 61
P + ++ + + FG + V+ ++ L + G V G NGAGKTT ++++ G L + GE
Sbjct: 6 PDFALQLAHVARKFGAQFVLRDVTLDLRPGEVAALFGGNGAGKTTLLRVVAGLLSASRGE 65
Query: 62 IKIIGMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELM 121
++ G ++ +R + +V +M E Y D+T E L + R+ GL A EL+
Sbjct: 66 GRVFGYDLKDKR-SVREHVFFMTEGGGLYGDLTATENLDFTARMYGLTAPSA-----ELL 119
Query: 122 AYTGVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILE 181
G+G A + +LSSG R+R+ A L+ LL+LDEP +NLD G+ + +
Sbjct: 120 ERVGLGAAANKRARDLSSGMRKRLQLARMLLAPSPLLLLDEPFANLDAGGKDAVLTHLRA 179
Query: 182 LAKSGKTVFISSH 194
+GKT+ SSH
Sbjct: 180 AQDAGKTILFSSH 192
>sp|Q07756|NODI_AZOCA NODULATION ATP-BINDING PROTEIN I >gi|486720|pir||S35007 nodulation
protein nodI - Azorhizobium caulinodans
>gi|310297|gb|AAB51167.1| (L18897) member of the
two-components ABC-transporters family; putative
[Azorhizobium caulinodans]
Length = 320
Score = 104 bits (257), Expect = 1e-21
Identities = 71/254 (27%), Positives = 122/254 (47%), Gaps = 5/254 (1%)
Query: 4 YIIETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIK 63
Y + + K G +V+ L++ V +G YG +G NGAGK++ I ++ G P G +
Sbjct: 13 YTVSATGVWKKRGGIDVLRGLDMYVRRGERYGIMGTNGAGKSSLINIILGLTPPDRGTVT 72
Query: 64 IIGMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMAY 123
+ G +M R+ +G +P+ +MT +E ++ GRL + +A +A ++
Sbjct: 73 VFGKDMRRQGHLARARIGVVPQDDCLEQNMTPYENVMLYGRLCRMTASEARKRADQIFEK 132
Query: 124 TGVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILELA 183
+ A + LS G R+ + A AL+ DP ++ILDE T LD R +I
Sbjct: 133 FSMMDCANRPVRLLSGGMRRLTMVARALVNDPYVIILDEATVGLDAKSRSALWQQIEASN 192
Query: 184 KSGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAK----IESTDYDVVVSDNE 239
+G TV + SH+ ++ERM + + I G + + + L K ++ + D VS
Sbjct: 193 ATGATVLVISHLAEDLERMTDRIACICAGTVRAEWETAALLKALGALKILEIDHSVSPRG 252
Query: 240 KLLKFLRDKIYVRE 253
K L F ++V E
Sbjct: 253 KEL-FCNHGLHVHE 265
>pir||E69162 sulfate transport system ATP-binding - Methanobacterium
thermoautotrophicum (strain Delta H)
>gi|2621547|gb|AAB84983.1| (AE000832) sulfate transport
system ATP-binding [Methanobacterium
thermoautotrophicum]
Length = 348
Score = 104 bits (257), Expect = 1e-21
Identities = 79/303 (26%), Positives = 156/303 (51%), Gaps = 20/303 (6%)
Query: 4 YIIETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIK 63
++IE +TK +G V+ ++NLKV +G G +GP GAGK+T ++++ +P GEI
Sbjct: 3 HVIELSGITKSYGDIKVLEDVNLKVREGETLGIIGPTGAGKSTLLRIMDLLERPDDGEIL 62
Query: 64 IIGMEM-PRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLG-LPKDKAVNQARELM 121
+G + + +++ R +G + + + T+ E ++Y R+ G P + V E M
Sbjct: 63 FMGENVDDLKPLEVRRRMGMVFQNTPVFRG-TVAESILYGPRIRGERPHESEVKDVLETM 121
Query: 122 AYTGVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILE 181
G G + ELS G+RQR+ A L+ PE+++LDE TS+LDP+ R I E
Sbjct: 122 GLKGYGS---RRTTELSGGERQRLALAQVLINRPEVVLLDEATSSLDPISRSRMEDVIAE 178
Query: 182 LAKSGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAKIESTDYDVVVSDNEKL 241
L TV ++H + + +++ + + ++ + +++ G+ R++ K ++ + V++
Sbjct: 179 L---DVTVIFTTHDLLQGQKLADRIAIL-NRSILQTGEPREIFKKPASRF---VAEFVGA 231
Query: 242 LKFLRDKIYVREVWEEEGIVRVKLDE---RFSEKFFLELPAFLASEKLAIKLFKPHTSPL 298
LR + ++ EGI ++ D SE+ ++ A + E + + + +S L
Sbjct: 232 RNMLRGRAHI----TAEGISLIECDGISIYSSERATGDVSATIRPEDITVSWQRTDSSAL 287
Query: 299 ERI 301
++
Sbjct: 288 NQL 290
>dbj|BAB09013.1| (AB012239) contains similarity to ABC transporter~gene_id:K11J9.22
[Arabidopsis thaliana]
Length = 953
Score = 104 bits (257), Expect = 1e-21
Identities = 79/279 (28%), Positives = 139/279 (49%), Gaps = 22/279 (7%)
Query: 19 NVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIKIIGMEMPRERV---K 75
+ V L + + K ++ LGPNGAGKTTTI LTG T G+ I G + R V
Sbjct: 546 HAVKGLWMNIAKDQLFCLLGPNGAGKTTTISCLTGINPVTGGDALIYGDSI-RSSVGISN 604
Query: 76 IMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMAYTGVGRLAFNKIE 135
I + +G P+ + +D ++ + L + GLP + A +L+A + A +
Sbjct: 605 IRKMIGVCPQFDILWDALSSEQHLHLFASIKGLPPASIKSTAEKLLADVKLTGAAKVRAG 664
Query: 136 ELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILELAKSGKTVFISSHI 195
S G ++R+ A AL+GDP+L+ LDEPT+ +DP+ R + I++ +K G+ + +++H
Sbjct: 665 SYSGGMKRRLSVAVALIGDPKLVFLDEPTTGMDPITR-RHVWDIIQESKKGRAIILTTHS 723
Query: 196 VSEIERMCNYVGLIKDGQL------------IEQGKVRDLAKIES-TDYDV-VVSDNEKL 241
+ E + + + +G++ G+L G V ++ IE+ D ++ V + +E L
Sbjct: 724 MEEADILSDRIGIMAKGRLRCIGTSIRLKSRFGTGFVATVSFIENKNDNNIGVGASHEPL 783
Query: 242 LKFLRDKIYVREVWEEEGIVRVKL---DERFSEKFFLEL 277
KF ++ + V E + + + E FF EL
Sbjct: 784 KKFFKEHLKVEPTEENKAFMTFVIPHDKENLLTGFFEEL 822
>pir||D83090 probable ATP-binding component of ABC transporter PA4456 [imported]
- Pseudomonas aeruginosa (strain PAO1)
>gi|9950691|gb|AAG07844.1|AE004859_13 (AE004859)
probable ATP-binding component of ABC transporter
[Pseudomonas aeruginosa]
Length = 269
Score = 104 bits (256), Expect = 2e-21
Identities = 60/222 (27%), Positives = 119/222 (53%), Gaps = 8/222 (3%)
Query: 4 YIIETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIK 63
Y +E K LT G R + N+++++P+G V G +GP+G GKTT ++++ L+P+ GE+
Sbjct: 7 YAVELKGLTFKRGSRAIFDNIDVRIPRGKVTGIMGPSGCGKTTLLRLIASQLRPSKGEVW 66
Query: 64 IIGMEMPR----ERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRL-LGLPKDKAVNQAR 118
+ G +P+ + + + G + + + D+ +FE + + R+ LP++ +
Sbjct: 67 VNGQNLPQLSRGDLFDMRKQFGVLFQSGALFTDLDVFENVAFPLRVHTQLPEEMIRDIVL 126
Query: 119 ELMAYTGVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGK 178
+ G+ +ELS G ++RV A A+ DP++L+ DEP DP+ M + +
Sbjct: 127 MKLQAVGLRGAVELMPDELSGGMKRRVALARAIALDPQILLYDEPFVGQDPIA-MGVLVR 185
Query: 179 ILELAKS--GKTVFISSHIVSEIERMCNYVGLIKDGQLIEQG 218
++ L G T + SH ++E + +Y+ ++ DG+++ G
Sbjct: 186 LIRLLNDALGITSIVVSHDLAETASIADYIYIVGDGRVLGHG 227
>gb|AAF23272.1|AF101263_2 (AF121672) ABC transporter MreA [Staphylococcus aureus]
Length = 261
Score = 103 bits (254), Expect = 3e-21
Identities = 58/204 (28%), Positives = 105/204 (51%), Gaps = 9/204 (4%)
Query: 3 TYIIETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEI 62
T + E K + ++ + V+ N+N+K+ KG +GPNGAGK+T +K++ G L GEI
Sbjct: 8 TPVFELKNVNYYYDHKKVLENINIKINKGEFLAIVGPNGAGKSTLLKLILGLLPLQSGEI 67
Query: 63 KIIGMEMPRERVKIMRNVGYMPERPLAYDD-------MTIFEFLVYMGRLLGLPKDKAVN 115
+ G++ ++ I + Y+ ++ A++ + L RL K
Sbjct: 68 FVGGIDFKNKKTSI--KLSYVSQKANAFNSGFPASVKEVVLSGLTKTKRLFQTFNSKDNE 125
Query: 116 QARELMAYTGVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEF 175
+ +++ + L I ELS GQ+QRV+ A AL+ +P +L+LDEPT+ +D EF
Sbjct: 126 KVIKVLERLNISDLIHKNIAELSGGQQQRVMIARALISEPAVLVLDEPTNGIDAKHVSEF 185
Query: 176 IGKILELAKSGKTVFISSHIVSEI 199
+ +L + G T+ + +H + +
Sbjct: 186 YNTLDQLKQEGITIILVTHDIGVV 209
>dbj|BAB04758.1| (AP001510) iron (III) dicitrate transport system (permease)
[Bacillus halodurans]
Length = 271
Score = 103 bits (254), Expect = 3e-21
Identities = 68/231 (29%), Positives = 120/231 (51%), Gaps = 8/231 (3%)
Query: 4 YIIETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIK 63
+ IETK LT + ++ L+L +PKG + +G NG GK+T ++ L LKP G +
Sbjct: 2 FSIETKNLTLGYDDTIIIEELDLNIPKGEITVLIGGNGCGKSTLLRSLARLLKPQSGAVL 61
Query: 64 IIGMEMPRERVK-IMRNVGYMPERPLAYDDMTIFEFLVYMGRL--LGLPK---DKAVNQA 117
+ G + + K + + +P+ P A + +T+++ L+ GR GL K K +
Sbjct: 62 LEGSSIQQLATKEVATKLAILPQGPEAPEGLTVYQ-LIKQGRYPHQGLFKKWTSKDEEKV 120
Query: 118 RELMAYTGVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIG 177
+ + T + LA ++ LS GQRQR A L D E+++LDEPT+ LD ++E +
Sbjct: 121 MQALEATRLTELADRPVDALSGGQRQRAWIAMTLAQDTEIILLDEPTTYLDLTHQIEILD 180
Query: 178 KILEL-AKSGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAKIE 227
+ EL + +T+ + H ++ R +++ +KD + QGK ++ E
Sbjct: 181 LLFELNEREKRTIVMVLHDLNLACRYAHHLIAVKDRTVYAQGKPEEVISCE 231
>sp|P31134|POTG_ECOLI PUTRESCINE TRANSPORT ATP-BINDING PROTEIN POTG
>gi|321862|pir||B45313 putrescine transport protein potG
- Escherichia coli >gi|147335|gb|AAA24410.1| (M93239)
nucleotide binding protein [Escherichia coli]
>gi|1651388|dbj|BAA35566.1| (D90723) Putrescine
transport protein PotG. [Escherichia coli]
>gi|1787079|gb|AAC73942.1| (AE000187) ATP-binding
component of putrescine transport system [Escherichia
coli K12]
Length = 404
Score = 102 bits (252), Expect = 5e-21
Identities = 62/230 (26%), Positives = 123/230 (52%), Gaps = 2/230 (0%)
Query: 3 TYIIETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEI 62
T ++E + LTK + ++ V +++L + KG ++ LG +G GK+T ++ML G +P+ G+I
Sbjct: 44 TPLLEIRNLTKSYDGQHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQPSAGQI 103
Query: 63 KIIGMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMA 122
+ G+++ + +R + M + + MT+ + + + + LPK + ++ E++
Sbjct: 104 MLDGVDL-SQVPPYLRPINMMFQSYALFPHMTVEQNIAFGLKQDKLPKAEIASRVNEMLG 162
Query: 123 YTGVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILE- 181
+ A K +LS GQRQRV A +L P+LL+LDEP LD R ++++
Sbjct: 163 LVHMQEFAKRKPHQLSGGQRQRVALARSLAKRPKLLLLDEPMGALDKKLRDRMQLEVVDI 222
Query: 182 LAKSGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAKIESTDY 231
L + G T + +H E M + ++ G+ ++ G+ ++ + +T Y
Sbjct: 223 LERVGVTCVMVTHDQEEAMTMAGRIAIMNRGKFVQIGEPEEIYEHPTTRY 272
>sp|P45031|YRBF_HAEIN HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PROTEIN HI1087
>gi|1075226|pir||B64182 hypothetical protein HI1087 -
Haemophilus influenzae (strain Rd KW20)
>gi|1574641|gb|AAC22743.1| (U32788) ABC transporter,
ATP-binding protein [Haemophilus influenzae Rd]
Length = 264
Score = 102 bits (252), Expect = 5e-21
Identities = 80/267 (29%), Positives = 130/267 (47%), Gaps = 22/267 (8%)
Query: 5 IIETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIKI 64
+IE K LT G R + NLNL+V KG + +GP+G GKTT +K++ G L P GEI
Sbjct: 5 LIEVKNLTFKRGDRVIYDNLNLQVKKGKITAIMGPSGIGKTTLLKLIGGQLMPEQGEILF 64
Query: 65 IGMEM----PRERVKIMRNVGYMPERPLAYDDMTIFEFLVY-MGRLLGLPKDKAVNQARE 119
G ++ RE ++ + +G + + + D++ F+ + + + LP++
Sbjct: 65 DGQDICRLSNRELYEVRKRMGMLFQSGALFTDISTFDNVAFPIREHTHLPENLIRQIVLM 124
Query: 120 LMAYTGVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKI 179
+ G+ A ELS G +R A A+ DP+L++ DEP + DP+ +G I
Sbjct: 125 KLEAVGLRGAAALMPSELSGGMARRAALARAIALDPDLIMFDEPFTGQDPIS----MGVI 180
Query: 180 LELAKS-----GKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAKIESTDYDVV 234
L L K T + SH V E+ + +Y +I D ++I +G L ++S D VV
Sbjct: 181 LSLIKRLNEALNLTSIVVSHDVEEVLSIADYAYIIADQKVIAEGTSEQL--LQSQDLRVV 238
Query: 235 -----VSDNEKLLKFLRDKIYVREVWE 256
SD K+ YV+E++E
Sbjct: 239 QFLKGESDGPVRFKYPAQD-YVKELFE 264
>gi|10957143 Potential ABC transporter [Lactococcus lactis]
>gi|11346268|pir||T43103 ABC transport protein -
Lactococcus lactis plasmid pMRC01
>gi|3582213|gb|AAC56009.1| (AE001272) Potential ABC
transporter [Lactococcus lactis]
Length = 298
Score = 102 bits (252), Expect = 5e-21
Identities = 86/296 (29%), Positives = 138/296 (46%), Gaps = 13/296 (4%)
Query: 5 IIETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIKI 64
+ L+ K+ ++ N++ K + G +G NG+GKTT +K + G +K + GEI+I
Sbjct: 7 VFSVNNLSTQIRKKKILKNVSFKGNTSQIIGLVGANGSGKTTIMKSILGLIKFS-GEIEI 65
Query: 65 IGMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMAYT 124
+ + I+ VG + E P Y +T E L L G +N+ + + T
Sbjct: 66 SKINILFNNHPILSRVGSLIEEPGIYPFLTGREHLQCFSILKGKEAQSDINEIIDQLKLT 125
Query: 125 GVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILELAK 184
K S G +Q++ A AL+ P L+ILDEP + LD + I+
Sbjct: 126 ---TFIDEKASSYSLGMKQKLAIAIALLNKPILVILDEPMNGLDIQSIHDLRDIIINKKN 182
Query: 185 SGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAKIESTDYDVVVSDNEKLLKF 244
G T ISSH++SE+E++ + + +IKDG+ I + K E + ++ +KL K
Sbjct: 183 QGVTFVISSHLLSELEKVADQLVIIKDGKSILNLPFKTFKKKEI--FCLITDQKDKLFKT 240
Query: 245 LRDKIYVREVWEEEGIVRVKLDERFSEKFFLELPAFLASEKLAIKLF-KPHTSPLE 299
L K + E I+ + LDE EK FL L + + +K F K T LE
Sbjct: 241 L--KFNNIPYSKNETIINILLDES-DEKQFLNL---IKENNIKLKKFIKKDTKDLE 290
>pir||E82210 amino acid ABC transporter, ATP-binding protein VC1359 [imported] -
Vibrio cholerae (group O1 strain N16961)
>gi|9655852|gb|AAF94517.1| (AE004215) amino acid ABC
transporter, ATP-binding protein [Vibrio cholerae]
Length = 251
Score = 102 bits (252), Expect = 5e-21
Identities = 65/231 (28%), Positives = 121/231 (52%), Gaps = 4/231 (1%)
Query: 4 YIIETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIK 63
++I+ K++ K++G+ +V+ N+NL V KG GP+G+GK+T I+ + + G+I
Sbjct: 9 FMIQIKDMNKWYGEFHVLKNINLNVKKGERIVICGPSGSGKSTMIRCINRLEEHQKGQII 68
Query: 64 IIGMEMPRERVKI---MRNVGYMPERPLAYDDMTIFEFLVYMGRLLG-LPKDKAVNQARE 119
+ G E+ + I R VG + + +T+ E + +PKDKA A +
Sbjct: 69 VAGNELTEDLKNIELVRREVGMCFQHFNLFPHLTVLENCTLAPIWVKKMPKDKAEEIAMK 128
Query: 120 LMAYTGVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKI 179
+ + A +LS GQ+QRV A +L +P++++ DEPTS LDP E + +
Sbjct: 129 YLTRVRIPEQADKYPGQLSGGQQQRVAIARSLCMNPQIMLFDEPTSALDPEMVREVLDVM 188
Query: 180 LELAKSGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAKIESTD 230
+ELA+ G T+ +H + + + + V + G++IE+ ++ + +D
Sbjct: 189 VELAEEGMTMLCVTHEMGFAKEVADRVIFMDAGEIIEENNPKEFFENPQSD 239
>pir||T43868 phosphate transport system peripheral membrane protein B [imported]
- Pseudomonas putida >gi|4519572|dbj|BAA75657.1|
(AB017356) peripheral membrane protein B [Pseudomonas
putida]
Length = 277
Score = 102 bits (251), Expect = 7e-21
Identities = 73/251 (29%), Positives = 135/251 (53%), Gaps = 29/251 (11%)
Query: 3 TYIIETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIK-------MLTGAL 55
T IE L+ F+G + ++++++ +PK V F+GP+G GK+T ++ ++ G
Sbjct: 28 TVAIEVPGLSLFYGDKQALFDVSMNIPKQRVTAFIGPSGCGKSTLLRTFNRMNDLVDGCR 87
Query: 56 KPTYGEIKIIGMEMPRER---VKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDK 112
G I + G + R+ ++ R VG + ++P + TI+E +VY R+ G+ K +
Sbjct: 88 --VEGAINLYGNNIYRKGEDVAELRRRVGMVFQKPNPFPK-TIYENVVYGLRIQGINKKR 144
Query: 113 AVNQARELMAYTGVGRLAFNKIEE--------LSSGQRQRVLFASALMGDPELLILDEPT 164
+++A E + G ++++++ LS GQ+QR++ A + +PE+L+LDEP
Sbjct: 145 VLDEAVE---WALKGAALWDEVKDRLHESALGLSGGQQQRLVIARTIAVEPEVLLLDEPC 201
Query: 165 SNLDPLGRMEFIGKILELAKSGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDL- 223
S LDP+ ++ I EL KS T+ I +H + + R+ +Y + G+L+E G L
Sbjct: 202 SALDPISTLKVEELIYEL-KSKYTIVIVTHNMQQAARVSDYTAFMYLGKLVEFGDTDTLF 260
Query: 224 ---AKIESTDY 231
AK ++ DY
Sbjct: 261 TNPAKKQTEDY 271
>dbj|BAA76420.1| (AB024992) multidrug resistance protein [Cicer arietinum]
Length = 261
Score = 102 bits (251), Expect = 7e-21
Identities = 66/227 (29%), Positives = 119/227 (52%), Gaps = 6/227 (2%)
Query: 2 PTYIIETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGE 61
P + I+ GK +++ + L +PKG + G +GP+G+GK+T ++ L +P
Sbjct: 24 PKFQIQNLRKLSDDGKIHILNGITLDIPKGVIVGIIGPSGSGKSTLLRALNRLWEPPSSS 83
Query: 62 IKIIGMEMPR-ERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQAREL 120
+ + ++ + + + R V + + P ++ T+ E + Y +L G+ + +L
Sbjct: 84 VFLDAQDICHLDVLSLRRKVAMLFQLPALFEG-TVAENVRYGPQLRGIKLTD--DDVSKL 140
Query: 121 MAYTGVGRLAFNKI-EELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKI 179
+ + +K +LS GQ QRV A L PE+L+LDEPTS LDP+ +
Sbjct: 141 LLMADLDASFMDKSGADLSVGQAQRVALARTLANQPEVLLLDEPTSALDPISTENIEAAL 200
Query: 180 LELAKS-GKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAK 225
++L KS G T+ + SH + +I+RM + V L+ DGQ++E K L++
Sbjct: 201 MKLNKSQGMTLIMVSHSIKQIQRMAHVVCLLVDGQIVEVLKPHQLSQ 247
>pir||F81929 probable iron-uptake permease ATP-binding protein NMA0842
[imported] - Neisseria meningitidis (group A strain
Z2491) >gi|7379558|emb|CAB84123.1| (AL162754) putative
iron-uptake permease ATP-binding protein [Neisseria
meningitidis Z2491]
Length = 352
Score = 101 bits (249), Expect = 1e-20
Identities = 71/247 (28%), Positives = 121/247 (48%), Gaps = 11/247 (4%)
Query: 3 TYIIETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEI 62
T + L+K F V+ +++L + G + +G +G GKTT ++ L G +P +GEI
Sbjct: 2 TAALHIGHLSKSFQNTPVLNDISLSLDPGEILFIVGASGCGKTTLLRCLAGFEQPDFGEI 61
Query: 63 KIIGMEMPRERVKIM---RNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARE 119
+ G + + + R +GY+ + + + +T++ Y LG K K + +
Sbjct: 62 SLSGRTIFSKNTNLPVRERRLGYVVQEGVLFPHLTVYRNTAYG---LGNGKGKTAQERQR 118
Query: 120 LMAY---TGVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLD-PLGRMEF 175
+ A TG+ LA ELS GQ+QRV A AL DPEL++LDEP S LD L R
Sbjct: 119 IEAMLELTGISELAGRYPHELSGGQQQRVALARALAPDPELILLDEPFSALDEQLRRQIR 178
Query: 176 IGKILELAKSGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAKIESTDYDVVV 235
I L +GK+ SH E + + + ++K G++++ +L + + D D +
Sbjct: 179 EDMIAALRANGKSAVFVSHDREEALQYADRIAVMKQGRILQTASPHELYR-QPADLDAAL 237
Query: 236 SDNEKLL 242
E ++
Sbjct: 238 FIGEGIV 244
>pir||G72418 sugar ABC transporter, ATP-binding protein - Thermotoga maritima
(strain MSB8) >gi|4980593|gb|AAD35197.1|AE001696_11
(AE001696) sugar ABC transporter, ATP-binding protein
[Thermotoga maritima]
Length = 507
Score = 100 bits (247), Expect = 2e-20
Identities = 76/267 (28%), Positives = 134/267 (49%), Gaps = 15/267 (5%)
Query: 4 YIIETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIK 63
Y + K + K F +++L V KG ++ +G NGAGKTT +K L G LKP GEI
Sbjct: 3 YAVVMKRIVKRFPGVLANDHVDLFVEKGEIHAIVGENGAGKTTLMKQLYGLLKPDEGEIY 62
Query: 64 IIGMEM----PRERVKIMRNVGYMPERPLAYDDMTIFE-FLVYMGRLLG--LPKDKAVNQ 116
I G + P + +K +G + + + D++T +E ++ M G L + KA +
Sbjct: 63 INGKRVEFSGPADAIK--SGIGMVHQHFMLVDNLTAYENVIIGMEPRKGILLDRKKARKE 120
Query: 117 ARELMAYTGVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFI 176
+ L G+ KIE++ G +QRV L E+LILDEPT+ L P E
Sbjct: 121 VKRLSEEYGLTIDVDMKIEDMPVGLQQRVEIIKTLYRGAEILILDEPTAVLTPQETEELF 180
Query: 177 GKILELAKSGKTVFISSHIVSEIERMCNYVGLIKDGQ-----LIEQGKVRDLAKIESTDY 231
+ L KSGKT+ SH ++E+ + + + +++ G+ + Q +++A++
Sbjct: 181 EVLKRLKKSGKTIIFISHKLNEVMEISDRITVMRQGRVTGNLITSQTTPQEIARL-MVGR 239
Query: 232 DVVVSDNEKLLKFLRDKIYVREVWEEE 258
DVV++ +K + + + ++W ++
Sbjct: 240 DVVLTVEKKPKEAGETLLKIEDLWVKD 266
>pir||H82808 toluene tolerance protein XF0421 [imported] - Xylella fastidiosa
(strain 9a5c) >gi|9105261|gb|AAF83231.1|AE003893_8
(AE003893) toluene tolerance protein [Xylella
fastidiosa]
Length = 264
Score = 100 bits (246), Expect = 3e-20
Identities = 70/223 (31%), Positives = 114/223 (50%), Gaps = 5/223 (2%)
Query: 1 MPTYIIETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYG 60
+PT ++ + G R V+ N+ L+VP+G++ LGP+G+GK+T + LTG L+PT G
Sbjct: 3 LPTPAVQLSGVRIERGGRTVLRNVALQVPRGSITTVLGPSGSGKSTMLAALTGELRPTEG 62
Query: 61 EIKIIG---MEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRL-LGLPKDKAVNQ 116
E+++ G + P+ +++ RN+G + + D++I E + R +P+
Sbjct: 63 EVRLFGDGIPQGPQALLEMRRNLGVLLQGNGLLTDLSIAENVALPLRAHTRMPEPLLQRL 122
Query: 117 ARELMAYTGVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFI 176
+ G+ +A ELS G +RV A AL DP L+I DEP + LDP+ +
Sbjct: 123 VLMKLHAVGLRAVAEAMPRELSGGMARRVALARALALDPPLMIYDEPLTGLDPIASGVIV 182
Query: 177 GKILELAKS-GKTVFISSHIVSEIERMCNYVGLIKDGQLIEQG 218
I L S G T I SH V E +C+ +I + +I G
Sbjct: 183 SLIKRLNDSLGLTTIIVSHHVHETLPICDQAVVIANSTVIFAG 225
>gb|AAD29104.1|AF039835_1 (AF039835) ATPase homolog GbuA [Listeria monocytogenes]
Length = 397
Score = 99.8 bits (245), Expect = 4e-20
Identities = 70/285 (24%), Positives = 133/285 (46%), Gaps = 45/285 (15%)
Query: 6 IETKELTKFFGKRNV------------------------VYNLNLKVPKGAVYGFLGPNG 41
I+ +ELTK FGK+ V + V +G ++ +G +G
Sbjct: 4 IKVEELTKIFGKKASKASSLLSQGKSKTDILKETGATIGVNKASFSVEEGEIFVIMGLSG 63
Query: 42 AGKTTTIKMLTGALKPTYGEIKIIGMEMPRERVK------------IMRNVGYMPERPLA 89
+GK+T +++L ++PT G+I + G E+ K + +N G P R
Sbjct: 64 SGKSTLVRLLNRLIEPTSGKIWLDGKELSSLNKKELLEVRRKSMSMVFQNFGLFPNR--- 120
Query: 90 YDDMTIFEFLVYMGRLLGLPKDKAVNQARELMAYTGVGRLAFNKIEELSSGQRQRVLFAS 149
TI + Y + G+ K++ A E +A G+ +LS G +QRV A
Sbjct: 121 ----TINRNVEYGLEIQGMDKEEREKNAAESLALVGLAGYGDQYPSQLSGGMQQRVGLAR 176
Query: 150 ALMGDPELLILDEPTSNLDPLGRMEFIGKILELA-KSGKTVFISSHIVSEIERMCNYVGL 208
AL +P++L++DE S LDPL R + ++L+L K KT+ +H + E R+ +++ +
Sbjct: 177 ALANNPDILLMDEAFSALDPLNRKDMQDQLLDLQDKMKKTIIFITHDLDEALRIGDHIMI 236
Query: 209 IKDGQLIEQGKVRDLAKIESTDY-DVVVSDNEKLLKFLRDKIYVR 252
++DG +++ G ++ + +Y + + D ++ + + +R
Sbjct: 237 MRDGSVVQTGSPEEILAHPANEYVEKFIEDVDRSKVYTASNVMIR 281
>pir||H72272 sugar ABC transporter, ATP-binding protein - Thermotoga maritima
(strain MSB8) >gi|4981834|gb|AAD36351.1|AE001783_2
(AE001783) sugar ABC transporter, ATP-binding protein
[Thermotoga maritima]
Length = 369
Score = 99.8 bits (245), Expect = 4e-20
Identities = 74/268 (27%), Positives = 133/268 (49%), Gaps = 6/268 (2%)
Query: 9 KELTKFFGKRNV-VYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIKIIGM 67
+ +TK + + V V N NL V LGP+G GKTTT++M+ G + T G+I I G
Sbjct: 9 ENVTKVYENKVVAVKNANLVVEDKEFVVLLGPSGCGKTTTLRMIAGLEEITDGKIYIDGK 68
Query: 68 EMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMAYTGVG 127
+ K R++ + + Y MT++E + + +L PKD+ + RE G+
Sbjct: 69 VVNDVEPKD-RDIAMVFQNYALYPHMTVYENMAFGLKLRKYPKDEIDRRVREAAKILGIE 127
Query: 128 RLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILEL-AKSG 186
L K +LS GQRQRV A++ +P++ + DEP SNLD R++ ++ +L +
Sbjct: 128 NLLDRKPRQLSGGQRQRVAVGRAIVRNPKVFLFDEPLSNLDAKLRVQMRSELKKLHHRLQ 187
Query: 187 KTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAKIESTDYDVVVSDNEKLLKFLR 246
T+ +H E M + + ++KDG++ + G ++ + + V + F+
Sbjct: 188 ATIIYVTHDQVEAMTMADKIVVMKDGEIQQIGTPHEIYNSPANVF-VAGFIGSPPMNFVN 246
Query: 247 DKIYVRE--VWEEEGIVRVKLDERFSEK 272
++ E +W + +VK+ + F +K
Sbjct: 247 ARVVRGEGGLWIQASGFKVKVPKEFEDK 274
>pir||T35757 probable branched chain amino acid transport ATP-binding protein -
Streptomyces coelicolor >gi|5689905|emb|CAB52068.1|
(AL109732) putative branched chain amino acid transport
ATP-binding protein [Streptomyces coelicolor A3(2)]
Length = 238
Score = 99.8 bits (245), Expect = 4e-20
Identities = 70/233 (30%), Positives = 116/233 (49%), Gaps = 12/233 (5%)
Query: 3 TYIIETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEI 62
T ++E ++L +GK V ++ KV G V +G NGAGKTTT++ L+G LKP G+I
Sbjct: 2 TALLEVEDLRVAYGKIEAVKGISFKVDAGEVVTLIGTNGAGKTTTLRTLSGLLKPVGGQI 61
Query: 63 KIIGMEMPRERVKIMRNVG--YMPERPLAYDDMTIFEFLVYMGRLL-----GLPKDKAVN 115
+ G + + + ++G + PE + MTI E + +G L G+ KD +
Sbjct: 62 RFGGKSLKKVPAHQIVSLGLAHSPEGRHIFPRMTI-EDNLRLGAFLRSDRPGIEKD--IQ 118
Query: 116 QARELMAYTGVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEF 175
+A +L G R LS G++Q + ALM P+LL+LDEP+ L P+ +
Sbjct: 119 RAYDLFPILGERRK--QAAGTLSGGEQQMLAMGRALMSQPKLLMLDEPSMGLSPIMMQKI 176
Query: 176 IGKILELAKSGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAKIES 228
+ I EL G T+ + + ++ +++ G ++ G +DL ES
Sbjct: 177 MATIAELKSQGTTILLVEQNAQAALSLADHGHVMEVGNIVLSGSGQDLLHDES 229
>emb|CAB95741.1| (AJ276960) putative ABC transporter [Staphylococcus xylosus]
Length = 257
Score = 99.5 bits (244), Expect = 5e-20
Identities = 63/208 (30%), Positives = 105/208 (50%), Gaps = 13/208 (6%)
Query: 1 MPTYIIETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYG 60
M T + E K + +F + V+ N+N+K+ +G +GPNGAGK+T +K++ G L G
Sbjct: 1 MSTPVFELKNIDYYFDNKQVLENINIKINRGEFVAIVGPNGAGKSTLLKIILGLLPIQKG 60
Query: 61 EIKIIGMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQ---- 116
I + G + + + + Y+ ++ A+ F V + GL K K + Q
Sbjct: 61 RIYVDGKDYNGNQSLL--KISYVSQKAQAFK--AGFPASVKEVVISGLTKRKKLFQWFNR 116
Query: 117 -----ARELMAYTGVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLG 171
+ +++ + L I ELS GQ+QRVL A AL+ +P +LILDEPTS +D
Sbjct: 117 NDEESVKTVLSRLNIEHLIDKNIAELSGGQQQRVLIARALISEPSVLILDEPTSGIDAKH 176
Query: 172 RMEFIGKILELAKSGKTVFISSHIVSEI 199
EF + L + G T+ + +H + +
Sbjct: 177 VSEFYETLETLKQEGVTIILVTHDIGVV 204
>pir||T03543 probable cobalt transport system ATP-binding protein cbiO -
Rhodobacter capsulatus >gi|3128344|gb|AAC16196.1|
(AF010496) cobalt transport ATP-binding protein CbiO
[Rhodobacter capsulatus]
Length = 280
Score = 99.1 bits (243), Expect = 6e-20
Identities = 71/224 (31%), Positives = 112/224 (49%), Gaps = 11/224 (4%)
Query: 3 TYIIETKELTKFF-GKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGE 61
T I+ + LT F G + +L+L VP+G LGPNGAGK+T + L G L+P G
Sbjct: 2 TPILAAEALTYAFPGGVKALDDLSLAVPQGESLAILGPNGAGKSTLLLHLNGTLRPQSGR 61
Query: 62 IKIIGMEMPRERVKIM---RNVGYMPERPLAYDDM----TIFEFLVYMGRLLGLPKDKAV 114
+ + G R + R VG + + DD T+FE + + LGL + +A
Sbjct: 62 VLLGGTATGHSRKDLTDWRRRVGLVLQDA---DDQLFAATVFEDVSFGPLNLGLSEAEAR 118
Query: 115 NQARELMAYTGVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRME 174
+ E +A + L LS GQ++RV A A+ PE+L+LDEPT+ LD G +
Sbjct: 119 ARVEEALAALSISDLRDRPTHMLSGGQKRRVAIAGAVAMRPEVLLLDEPTAGLDLAGTEQ 178
Query: 175 FIGKILELAKSGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQG 218
+ + L +G T+ S+H V + + V L + G+++ +G
Sbjct: 179 LLTLLHGLRAAGMTLVFSTHDVELAAALADRVALFRTGRVLAEG 222
>emb|CAC05961.1| (AL391763) ATP-binding protein [Streptomyces coelicolor]
Length = 253
Score = 99.1 bits (243), Expect = 6e-20
Identities = 69/239 (28%), Positives = 127/239 (52%), Gaps = 22/239 (9%)
Query: 3 TYIIETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEI 62
T +++ + + K FG V+ ++L+V +G V+ +GP+G+GK+T ++ + K G +
Sbjct: 2 TAMVKAEGVHKSFGAVEVLKGIDLEVKQGEVFCLIGPSGSGKSTFLRCINHLEKINAGRL 61
Query: 63 KIIG------------MEMPRERVKIMR-NVGYMPERPLAYDDMTIFEFLVYMG-RLLGL 108
+ G E+ V + R ++G + +R + MT E ++ ++ G+
Sbjct: 62 YVDGELVGYRQKGDKLYELKDSEVALKRRDIGMVFQRFNLFPHMTAVENVMEAPVQVKGM 121
Query: 109 PKDKAVNQARELMAYTGVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLD 168
+ +A +AR L+ G+ A N +LS GQ+QRV A AL DP+L++ DEPTS LD
Sbjct: 122 SRAQARERARGLLERVGLADKAGNYPSQLSGGQQQRVAIARALAMDPKLMLFDEPTSALD 181
Query: 169 PLGRMEFIGKIL----ELAKSGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDL 223
P E +G +L +LA+SG T+ + +H + + + + + +G ++E G RD+
Sbjct: 182 P----ELVGDVLDVMRDLAESGMTMVVVTHEMGFAREVGDSLVFMDNGVVVESGNPRDV 236
>emb|CAB59828.1| (AJ012388) hypothetical protein [Lactococcus lactis]
Length = 368
Score = 98.3 bits (241), Expect = 1e-19
Identities = 75/250 (30%), Positives = 124/250 (49%), Gaps = 33/250 (13%)
Query: 3 TYIIETKELTKFFGKRN----VVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPT 58
T IIE L+ F ++ V N L + KG +YG +G +GAGK+T ++ + KPT
Sbjct: 2 TAIIELNNLSVQFHQKGRLVTAVKNATLHIEKGDIYGVIGYSGAGKSTLVRTINLLQKPT 61
Query: 59 YGEI-----KIIGMEMPRERV-----KIMRNVGYMPERPLAYDDMTIFEFLVYM------ 102
G+I KI E P + + + +G + + + T+F + +
Sbjct: 62 EGQIVINGEKIFDSENPVKFTGAKLREFRQKIGMIFQHFNLLSEKTVFNNVAFALQHSQI 121
Query: 103 ----GRLLGLPKDKAVNQARELMAYTGVGRLAFNKIEELSSGQRQRVLFASALMGDPELL 158
G+ L K + ++ EL+ + L+ +LS GQ+QRV A AL DPE+L
Sbjct: 122 EDKNGKKRYLTKKEKNDKVTELLKLVDLADLSDKYPAQLSGGQKQRVAIARALANDPEIL 181
Query: 159 ILDEPTSNLDPLGRMEFIGKILELAKS-----GKTVFISSHIVSEIERMCNYVGLIKDGQ 213
I DE TS LDP + +IL+L KS G TV + +H + ++ + N V ++++G+
Sbjct: 182 ISDEGTSALDP----KTTNQILDLLKSLHEKLGITVVLITHEMQVVKEIANKVAVMQNGE 237
Query: 214 LIEQGKVRDL 223
+IEQ + D+
Sbjct: 238 IIEQNSLIDI 247
>gb|AAF99584.1|AF207710_9 (AF207710) MutF [Streptococcus mutans]
Length = 117
Score = 98.3 bits (241), Expect = 1e-19
Identities = 51/109 (46%), Positives = 71/109 (64%), Gaps = 3/109 (2%)
Query: 4 YIIETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIK 63
Y++ETK LTK FGK+ V LNLKV + ++YG LGPNG+GK+TT+KM+TG L+ T G I
Sbjct: 3 YMLETKNLTKQFGKQTAVNQLNLKVERHSIYGLLGPNGSGKSTTLKMITGMLRKTSGHIL 62
Query: 64 IIGMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDK 112
I G + R K + N+G + E P Y+++T E L +LGLP +
Sbjct: 63 IDGHDWSR---KDLENIGALIESPPLYENLTARENLKVRTLMLGLPDSR 108
>gb|AAC05643.1| (AF033673) unknown [Pseudomonas marginalis pv. alfalfae]
Length = 254
Score = 97.9 bits (240), Expect = 1e-19
Identities = 66/225 (29%), Positives = 114/225 (50%), Gaps = 4/225 (1%)
Query: 2 PTYIIETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGE 61
P II+ + + K++G+ +V+ ++NL V +G GP+G+GK+TTI+ L + G
Sbjct: 11 PEGIIQMQGVNKWYGQFHVLKDINLNVKQGERIVLCGPSGSGKSTTIRCLNRLEEHQQGR 70
Query: 62 IKIIGMEMPRERVKI---MRNVGYMPERPLAYDDMTIFEFLVYMGRLLG-LPKDKAVNQA 117
I + G+E+ + +I R VG + + + +TI + + +PK KA A
Sbjct: 71 IVVDGVELTNDLKQIEAIRREVGMVFQHFNLFPHLTILQNCTLAPMWVRKMPKRKAEEIA 130
Query: 118 RELMAYTGVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIG 177
+ + A +LS GQ+QRV A AL P++++ DEPTS LDP E +
Sbjct: 131 MHYLERVRIPEQAHKFPGQLSGGQQQRVAIARALCMKPKIMLFDEPTSALDPEMVKEVLD 190
Query: 178 KILELAKSGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRD 222
++ LA+ G T+ +H + + N V + G+++EQ D
Sbjct: 191 TMIGLAEDGMTMLCVTHEMGFARTVANRVIFMDKGEIVEQAAPND 235
>pir||E72314 ribose ABC transporter, ATP-binding protein - Thermotoga maritima
(strain MSB8) >gi|4981493|gb|AAD36035.1|AE001758_13
(AE001758) ribose ABC transporter, ATP-binding protein
[Thermotoga maritima]
Length = 523
Score = 97.9 bits (240), Expect = 1e-19
Identities = 77/283 (27%), Positives = 133/283 (46%), Gaps = 34/283 (12%)
Query: 5 IIETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIKI 64
++E + +TK F V N+ L++ KG V +G NGAGK+T +K+L G G+I +
Sbjct: 12 LLEARNITKTFPGVIAVNNVTLQIYKGEVCALVGENGAGKSTLMKILAGVYPDYEGQIFL 71
Query: 65 IGMEM----PRERVKIMRNVGYMPER----PLAYDDMTIFEFLVYMGRLLGLPKDKAVNQ 116
G E+ PRE + + +P+ P IF + + K Q
Sbjct: 72 EGKEVRFRNPREAQE--NGIALIPQELDLVPNLSSAENIFLSREPVNEFGVIEYQKMFEQ 129
Query: 117 ARELMAYTGVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFI 176
A +L + GV K+E+LS+ Q+Q V A AL D +++I+DEPTS + +
Sbjct: 130 ASKLFSKLGVNIDPKTKVEDLSTSQQQMVAIAKALSLDAKIIIMDEPTSAIGKRETEQLF 189
Query: 177 GKILELAKSGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAKIESTDYDVVVS 236
I L GK+V SH + EI + + V +++DG+ + +G + +
Sbjct: 190 NIIRSLKNEGKSVIYISHRLEEIFEIADRVVVMRDGRKVGEGPIEEF------------- 236
Query: 237 DNEKLLKFL----RDKIYVR-------EVWEEEGIVRVKLDER 268
D++KL++ + D+ +++ E++ EGI LD +
Sbjct: 237 DHDKLVRLMVGRSIDQFFIKERATITDEIFRVEGIKLWSLDRK 279
>gi|9964444 AMV130 [Amsacta moorei entomopoxvirus]
>gi|9944653|gb|AAG02836.1|AF250284_130 (AF250284) AMV130
[Amsacta moorei entomopoxvirus]
Length = 1384
Score = 97.9 bits (240), Expect = 1e-19
Identities = 71/308 (23%), Positives = 148/308 (48%), Gaps = 24/308 (7%)
Query: 4 YIIETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIK 63
Y ++ + + K++ ++ N+ L + K LG N AGK+T + ++ G +KP G+I
Sbjct: 405 YYVKIQNIYKYYDNNFILNNICLDIIKNNTTVLLGNNSAGKSTLLSIIFGLIKPNKGKIL 464
Query: 64 IIGMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMAY 123
++ +GY P+ + + D T+ E + L GL ++ + E++ Y
Sbjct: 465 TNNIK-----------IGYCPQNNINFTDFTVKENIYLFNILRGLSSLQSKIKTNEIIIY 513
Query: 124 TGVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILELA 183
+ + I ELS ++++ A +L+ D + +++DEPT N+D + E I ++ L
Sbjct: 514 LKLHDIENCIITELSECSKRKLQLAFSLIDDSDFILIDEPTHNIDLKSKQE-IWDLISLL 572
Query: 184 KSGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAKIESTDYDVVVSDN---EK 240
K KT+ I++H + E+E + + + ++ +G + + ++ K + Y + + +N +K
Sbjct: 573 KRNKTILITTHCIDEVELLADNLIILNNGNVKYNSTLFNIKKDANVTYKLSIHNNSTDDK 632
Query: 241 LLKFLRDK----IYVREVWEEEGIVRVKLDERFSEKFFLELPAFLASEKLAIKLFKPHTS 296
+ + + + + ++ E I + E + FL+L L + I FK +T
Sbjct: 633 IKNIIINSGFIILNINKIDENNSIYNIYKTENSN---FLKLFELLENVNCDIIYFKSNT- 688
Query: 297 PLERILMK 304
L IL K
Sbjct: 689 -LNDILYK 695
>sp|Q57855|Y412_METJA HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PROTEIN MJ0412
>gi|2129162|pir||D64351 nitrate transport ATP-binding
protein - Methanococcus jannaschii
>gi|1591118|gb|AAB98401.1| (U67493) nitrate transporter
protein (nrtC) homolog (cmpC) [Methanococcus jannaschii]
Length = 267
Score = 97.5 bits (239), Expect = 2e-19
Identities = 74/259 (28%), Positives = 129/259 (49%), Gaps = 28/259 (10%)
Query: 6 IETKELTKFF---GKR-NVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGE 61
++ + LTK F G R + N+NL+V + +GP+G GKTT ++++ G PT G+
Sbjct: 17 LKVENLTKIFEFNGNRVKALDNINLEVYENEFLTVMGPSGCGKTTLLRIIAGLDYPTEGK 76
Query: 62 IKIIGMEMP---RERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQAR 118
+ + G E+ +R + + MP R T+ + + + L G+PK++ + A+
Sbjct: 77 VLLDGKEVKGPGADRGVVFQQYTLMPWR-------TVLKNVTFGLELKGIPKNERIEIAK 129
Query: 119 ELMAYTGVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGK 178
+ + G+ +LS G +QRV A L DPE++++DEP + LD R +
Sbjct: 130 KFIKMVGLEGFEDAYPYQLSGGMQQRVAIARTLANDPEIVLMDEPFAALDAQTRNILQNE 189
Query: 179 ILEL-AKSGKTVFISSHIVSEIERMCNYV-------GLIKDGQLIEQGKVRDLAKIESTD 230
+L++ K KTVF +H V E + + V G IK+ I+ + RD IE +
Sbjct: 190 LLKIWQKEKKTVFFVTHSVDEAVYLSDRVVVLTARPGRIKEIVKIDLERPRDRTSIEFLE 249
Query: 231 YDVVVSDNEKLLKFLRDKI 249
Y +K+L L+D++
Sbjct: 250 Y------RKKILNILKDEV 262
>pir||C64496 ABC transporter ATP-binding protein - Methanococcus jannaschii
>gi|1592193|gb|AAB99589.1| (U67597) cobalt transport
ATP-binding protein (cbiO) [Methanococcus jannaschii]
Length = 278
Score = 97.1 bits (238), Expect = 2e-19
Identities = 70/241 (29%), Positives = 121/241 (50%), Gaps = 21/241 (8%)
Query: 23 NLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIKIIGMEMPRERVK------- 75
N+NL + K V LGPNGAGKTT +K+L G + P GE+ G ++ E ++
Sbjct: 23 NVNLNIYKNEVVAILGPNGAGKTTLLKILDGLVFPDKGEVYFEGKKLTDEILRDKELMKE 82
Query: 76 IMRNVGYMPERPLAYDDMTIFEFLVY----MGRLLGLPKDKAVNQARELMAYTGVGRLAF 131
R VG++ + P D+ +F V+ L K+KA+ + + + L
Sbjct: 83 FRRKVGFVFQNP----DVMLFNPTVWDEVAFSPLHLYSKEKAIEVTDKTLKDMKIYHLKD 138
Query: 132 NKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILELAKSGKTVFI 191
LS G++++V + L +PE++++DEPTS LDP R E + I + GKTV +
Sbjct: 139 RHPYNLSGGEKKKVSISCILSVEPEVILMDEPTSALDPKSRAEIMNLIKSFKECGKTVVL 198
Query: 192 SSHIVSE--IERMCNYVGLIKDGQLIEQGKVRDLAKIESTDYDVVVSDNEKLLKFLRDKI 249
+H ++ + C + + ++I +GKV+DL + + ++ V + KL L++
Sbjct: 199 VTHDLNLACLADRC----YVLNKKVIFEGKVKDLFSLNLDELNLDVPEISKLFIKLKNMG 254
Query: 250 Y 250
Y
Sbjct: 255 Y 255
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.321 0.141 0.399
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 114807508
Number of Sequences: 2977
Number of extensions: 4837656
Number of successful extensions: 21637
Number of sequences better than 1.0e-10: 1822
Number of HSP's better than 0.0 without gapping: 245
Number of HSP's successfully gapped in prelim test: 1577
Number of HSP's that attempted gapping in prelim test: 18688
Number of HSP's gapped (non-prelim): 2227
length of query: 315
length of database: 189,106,746
effective HSP length: 56
effective length of query: 259
effective length of database: 155,591,474
effective search space: 40298191766
effective search space used: 40298191766
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.8 bits)
S2: 165 (68.7 bits)