BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB1694 (PAB1694) DE:Hypothetical protein
(322 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||B75078 hypothetical protein PAB1694 - Pyrococcus abyssi (st... 636 0.0
pir||F71066 hypothetical protein PH1228 - Pyrococcus horikoshii ... 558 e-158
pir||D71246 hypothetical protein PH0227 - Pyrococcus horikoshii ... 159 5e-38
gb|AAC27019.1| (AF032114) unknown [Methylobacterium extorquens] 148 1e-34
pir||D75210 hypothetical protein PAB0141 - Pyrococcus abyssi (st... 146 2e-34
emb|CAA76303.1| (Y16585) Orf322 [Methanosarcina mazei] 145 7e-34
sp|Q58822|YE27_METJA HYPOTHETICAL PROTEIN MJ1427 >gi|2128851|pir... 138 1e-31
gi|11499671 conserved hypothetical protein [Archaeoglobus fulgid... 136 3e-31
sp|O26918|Y830_METTH HYPOTHETICAL PROTEIN MTH830 >gi|7429726|pir... 126 3e-28
pir||H72472 hypothetical protein APE2425 - Aeropyrum pernix (str... 117 2e-25
pir||A72632 hypothetical protein APE1512 - Aeropyrum pernix (str... 115 6e-25
gb|AAK40700.1| Conserved hypothetical protein [Sulfolobus solfat... 87 3e-16
>pir||B75078 hypothetical protein PAB1694 - Pyrococcus abyssi (strain Orsay)
>gi|5458439|emb|CAB49927.1| (AJ248286) hypothetical
protein [Pyrococcus abyssi]
Length = 322
Score = 636 bits (1622), Expect = 0.0
Identities = 322/322 (100%), Positives = 322/322 (100%)
Query: 1 MIVRTPRRLHLGMIDPTGSLGRRFGSIGVALEGGYEIKVTPAGSLTIEADEEDRKVIERV 60
MIVRTPRRLHLGMIDPTGSLGRRFGSIGVALEGGYEIKVTPAGSLTIEADEEDRKVIERV
Sbjct: 1 MIVRTPRRLHLGMIDPTGSLGRRFGSIGVALEGGYEIKVTPAGSLTIEADEEDRKVIERV 60
Query: 61 VKELNLKYETGLDYYIEVRRSIPRHIGLGSTTQLTLAIASAILRIAKKEVPIEDVAFSLG 120
VKELNLKYETGLDYYIEVRRSIPRHIGLGSTTQLTLAIASAILRIAKKEVPIEDVAFSLG
Sbjct: 61 VKELNLKYETGLDYYIEVRRSIPRHIGLGSTTQLTLAIASAILRIAKKEVPIEDVAFSLG 120
Query: 121 RSRESGASLYVFKYGGLVIDGGVKDKYPPLVMRHEFPENWAFLLVIPKVKRGLSEEEEKD 180
RSRESGASLYVFKYGGLVIDGGVKDKYPPLVMRHEFPENWAFLLVIPKVKRGLSEEEEKD
Sbjct: 121 RSRESGASLYVFKYGGLVIDGGVKDKYPPLVMRHEFPENWAFLLVIPKVKRGLSEEEEKD 180
Query: 181 IMFGSNFGKVEIAKEISHRLLLGLIPALVERDIESFGRFLSEIQELVGSHFSTFQGGTFR 240
IMFGSNFGKVEIAKEISHRLLLGLIPALVERDIESFGRFLSEIQELVGSHFSTFQGGTFR
Sbjct: 181 IMFGSNFGKVEIAKEISHRLLLGLIPALVERDIESFGRFLSEIQELVGSHFSTFQGGTFR 240
Query: 241 EDIGIIVEILKELTYGAGQSSWGPTVYGLIKKEEFNLVKTKVIDSLNDYGIKAEVELGIP 300
EDIGIIVEILKELTYGAGQSSWGPTVYGLIKKEEFNLVKTKVIDSLNDYGIKAEVELGIP
Sbjct: 241 EDIGIIVEILKELTYGAGQSSWGPTVYGLIKKEEFNLVKTKVIDSLNDYGIKAEVELGIP 300
Query: 301 RNKGAEIVGENLFLERLISGVK 322
RNKGAEIVGENLFLERLISGVK
Sbjct: 301 RNKGAEIVGENLFLERLISGVK 322
>pir||F71066 hypothetical protein PH1228 - Pyrococcus horikoshii
>gi|3257645|dbj|BAA30328.1| (AP000005) 325aa long
hypothetical protein [Pyrococcus horikoshii]
Length = 325
Score = 558 bits (1422), Expect = e-158
Identities = 266/322 (82%), Positives = 306/322 (94%)
Query: 1 MIVRTPRRLHLGMIDPTGSLGRRFGSIGVALEGGYEIKVTPAGSLTIEADEEDRKVIERV 60
+IVRTPRRLHLG+IDPTGSLGR+FGSIGVALEGGY+IKVTPAGSLTIEAD+EDR+VIE++
Sbjct: 4 VIVRTPRRLHLGIIDPTGSLGRKFGSIGVALEGGYDIKVTPAGSLTIEADKEDREVIEKI 63
Query: 61 VKELNLKYETGLDYYIEVRRSIPRHIGLGSTTQLTLAIASAILRIAKKEVPIEDVAFSLG 120
VKELNL+YETGLDYYIEVR+SIPRHIGLGSTTQLTLAIASAILRIAKK++PIE+VAFSL
Sbjct: 64 VKELNLEYETGLDYYIEVRKSIPRHIGLGSTTQLTLAIASAILRIAKKDIPIEEVAFSLK 123
Query: 121 RSRESGASLYVFKYGGLVIDGGVKDKYPPLVMRHEFPENWAFLLVIPKVKRGLSEEEEKD 180
R+RESGA LY+FK+GG V+DGGVKD YPPL+MRH+FPENWAF+LVIPKVKRGLSEEEE+
Sbjct: 124 RARESGAGLYIFKFGGFVVDGGVKDTYPPLIMRHDFPENWAFILVIPKVKRGLSEEEEEG 183
Query: 181 IMFGSNFGKVEIAKEISHRLLLGLIPALVERDIESFGRFLSEIQELVGSHFSTFQGGTFR 240
IMFGSNFG V IAKEI++RL+LGL+P+L+E++IE FGRFL++IQELVG HF+TFQGGTFR
Sbjct: 184 IMFGSNFGNVNIAKEITYRLMLGLVPSLIEKNIEKFGRFLTDIQELVGKHFATFQGGTFR 243
Query: 241 EDIGIIVEILKELTYGAGQSSWGPTVYGLIKKEEFNLVKTKVIDSLNDYGIKAEVELGIP 300
EDI +VEILKE TYGAGQSSWGPTVYGLI+KEE+N V+ KV D L+DYGIKAE+ELGIP
Sbjct: 244 EDIKTVVEILKETTYGAGQSSWGPTVYGLIRKEEYNSVRVKVADLLDDYGIKAEIELGIP 303
Query: 301 RNKGAEIVGENLFLERLISGVK 322
RNKGAE++GENLFLERLISGVK
Sbjct: 304 RNKGAEVLGENLFLERLISGVK 325
>pir||D71246 hypothetical protein PH0227 - Pyrococcus horikoshii
>gi|3256616|dbj|BAA29299.1| (AP000001) 316aa long
hypothetical protein [Pyrococcus horikoshii]
Length = 316
Score = 159 bits (397), Expect = 5e-38
Identities = 104/314 (33%), Positives = 164/314 (52%), Gaps = 17/314 (5%)
Query: 6 PRRLHLGMIDPTGSLGRRFGSIGVALEGGY-EIKVTPAGSLTIEADEEDRKVIERVVKEL 64
P LH G D +G +GR FG++G A+E Y E+++ T E D+ + K R ++ L
Sbjct: 7 PAHLHAGNPDLSGDMGRLFGTLGFAIEYPYLEVEIE-----TSEKDKANDKDALRFLERL 61
Query: 65 NLKYETGLDYYIEVRRSIPRHIGLGSTTQLTLAIASAILRIAKKEVPIEDVAFSLGRSRE 124
KYE IE++ IP+ +GLG T L L + I RI + +ED+A ++ R
Sbjct: 62 REKYEFP-PVKIEIKHYIPKWVGLGFHTTLALTLGLGINRIYNLGLSLEDIALTVRRGLI 120
Query: 125 SGASLYVFKYGGLVIDGGV-----KDKYPPLVMRHEFPENWAFLLVIPKVKRGLSEE--- 176
+ Y K GG +++GG + PPL+ R PENW F++ IP+ R EE
Sbjct: 121 TALGFYAVKLGGFIVEGGFPVNKREKVVPPLIFRENIPENWFFVVAIPETPRKDLEEVRR 180
Query: 177 EEKDIMFGSNFGKVEIAKEISHRLLLGLIPALVERDIESFGRFLSEIQELVGSHFSTFQG 236
E +I+ E+A +S +L+ ++PA VERDI++FG L + L+G +S +Q
Sbjct: 181 VEDEILTNLKKMPPELADRLSRIVLMKILPAFVERDIKAFGEGLYQFNNLLGKFWSDYQE 240
Query: 237 GTF-REDIGIIVEILKELTYGAGQSSWGPTVYGLI-KKEEFNLVKTKVIDSLNDYGIKAE 294
+ E + ++++ E Y A QSSWGPT YGL+ + + +V+ K+ + G E
Sbjct: 241 SIYCCELVSEGIKVMLEDAYCACQSSWGPTFYGLVDDRHKAEIVRDKIKKLFEENGDSGE 300
Query: 295 VELGIPRNKGAEIV 308
V + N GA I+
Sbjct: 301 VFITKANNTGAVIL 314
>gb|AAC27019.1| (AF032114) unknown [Methylobacterium extorquens]
Length = 335
Score = 148 bits (369), Expect = 1e-34
Identities = 91/277 (32%), Positives = 136/277 (48%), Gaps = 7/277 (2%)
Query: 3 VRTPRRLHLGMIDPTGSLGRRFGSIGVALEG-GYEIKVTPAGSLTIEADEEDRKVIERVV 61
VR P RLH G +D G LGRRFGSIG+AL+ ++ PA ++ E +R +
Sbjct: 29 VRAPARLHFGFLDLNGGLGRRFGSIGLALDAPAVQLVARPAKRVSASGPEAERVRANLLA 88
Query: 62 KELNLKYETGLDYYIEVRRSIPRHIGLGSTTQLTLAIASAILRIAKKEVPIEDVAFSLGR 121
L + +E+ SIP H G GS TQL LA+A+A+ R+ + D A L R
Sbjct: 89 AAAYLDVPEAVA--VEIEESIPAHAGFGSGTQLALAVAAALARLNGRPFAPADFADVLDR 146
Query: 122 SRESGASLYVFKYGGLVIDGG--VKDKYPPLVMRHEFPENWAFLLVIPKVKRGLSEEEEK 179
SG L F GGL++DGG PP++ R +P +W +L++ + G+ E
Sbjct: 147 GNRSGVGLAAFTEGGLIVDGGRDGSGAPPPVIARLPYPGDWRVVLILDEAMTGVHGSRET 206
Query: 180 DIMFGSNFGKVEIAKEISHRLLLGLIPALVERDIESFGRFLSEIQELVGSHFSTFQGGTF 239
+ A EI +L+ ++PA + FG ++ IQ+ +G HF+ QGG F
Sbjct: 207 EAFRDLPPFDAGQAAEICRIVLMQVLPAAATAEPNGFGAGITAIQKRIGDHFAPHQGGRF 266
Query: 240 RED--IGIIVEILKELTYGAGQSSWGPTVYGLIKKEE 274
+ I + G GQSSWGPT + L+ ++
Sbjct: 267 ASPAVADALAAIAQAGVPGYGQSSWGPTGFALVPSQK 303
>pir||D75210 hypothetical protein PAB0141 - Pyrococcus abyssi (strain Orsay)
>gi|5457640|emb|CAB49131.1| (AJ248283) hypothetical
protein [Pyrococcus abyssi]
Length = 318
Score = 146 bits (366), Expect = 2e-34
Identities = 97/317 (30%), Positives = 163/317 (50%), Gaps = 15/317 (4%)
Query: 3 VRTPRRLHLGMIDPTGSLGRRFGSIGVALEGGY-EIKVTPAGSLTIEADEEDRKVIERVV 61
+R P LH G D +G +GR FG++G A++ Y EI V A +A+++D V +
Sbjct: 4 IRAPAHLHTGNPDLSGDMGRLFGTLGFAIDFPYLEITVKRAEGNKDKANDKDALVF---L 60
Query: 62 KELNLKYETGLDYYIEVRRSIPRHIGLGSTTQLTLAIASAILRIAKKEVPIEDVAFSLGR 121
K L Y+ +E+ IP+ +G+G T L L + + ++ + +ED+A ++ R
Sbjct: 61 KRLRESYDFP-PVEVEILHYIPKWVGVGFHTTLALTLGLGVSKLYSLNLSLEDIALAVRR 119
Query: 122 SRESGASLYVFKYGGLVIDGGV-----KDKYPPLVMRHEFPENWAFLLVIPKVKRGLSEE 176
+ Y K GG +++GG + PPL+ R E P +W F++ IP+ R EE
Sbjct: 120 GLITALGFYAVKVGGFIVEGGFPVNRREKVVPPLIFRGEVPGDWFFVVAIPETPRKKLEE 179
Query: 177 EEK---DIMFGSNFGKVEIAKEISHRLLLGLIPALVERDIESFGRFLSEIQELVGSHFST 233
K +I+ E+A +S +L+ ++PA VERDI++FG L + L+G +S
Sbjct: 180 VRKVEDNILENLKKMPPELADRLSRIVLMKILPAFVERDIKTFGEGLYQFNHLLGQFWSD 239
Query: 234 FQGGTFREDI-GIIVEILKELTYGAGQSSWGPTVYGLIKK-EEFNLVKTKVIDSLNDYGI 291
+Q + DI ++++ E Y A Q+SWGPT YG++ V+ K+ L + G
Sbjct: 240 YQENVYCCDIVNEGIKLMLEDAYCACQTSWGPTFYGIVDSLSRAENVRDKIKRFLEENGD 299
Query: 292 KAEVELGIPRNKGAEIV 308
EV + N+GA ++
Sbjct: 300 GGEVFVTKANNRGAVVL 316
>emb|CAA76303.1| (Y16585) Orf322 [Methanosarcina mazei]
Length = 321
Score = 145 bits (362), Expect = 7e-34
Identities = 105/330 (31%), Positives = 167/330 (49%), Gaps = 38/330 (11%)
Query: 3 VRTPRRLHLGMIDPTGSLGRRFGSIGVALEG-GYEIKVTPAGSLTIEADEEDRKVIERVV 61
V +P RLHL +ID +GR G +G+ LE EI + A ++ + + R++
Sbjct: 4 VVSPSRLHLTLIDLNAEIGRVDGGVGITLESPSLEISASEADTVEVVGSS---LLAGRML 60
Query: 62 KELNLKYETGLDYYIEVRRSIPRHIGLGSTTQLTLAIASAILRIAKKEVPIEDVAFSLGR 121
K G I ++R +P H+GLGS TQ L++A+AI I + ++A ++GR
Sbjct: 61 KAAKAVIPEGKGIKIHIKRDLPDHVGLGSGTQAALSVAAAINEIYGLGKSVRELAVAVGR 120
Query: 122 SRESGASLYVFKYGGLVIDGG--VKDKYP------------PLVMRHEFPENWAFLLVIP 167
SG + F+YGG ++DGG +DK P++ R FP+ W +L IP
Sbjct: 121 GGTSGIGVAAFEYGGFILDGGHRFRDKGAFSPSAASRMPPGPVLFRRAFPD-WNIVLAIP 179
Query: 168 KVKRGLSEEEEKDIMFGSNFGKVEIAKEISHRLLLGLIPALVERDIESFGRFLSEIQELV 227
K G+ + EE DI + + +EISH +L+ ++PAL+E DI+SFGR +
Sbjct: 180 NTK-GVHDAEEVDIFKKACPIPLSEVQEISHVILMQMLPALIEEDIDSFGRAV------- 231
Query: 228 GSHFSTFQGGTFREDIGIIVE-ILKELTY-------GAGQSSWGPTVYGLIKKEEFNLVK 279
+HF T G + ++ + E +L + Y G+G SS+GP VYG+++
Sbjct: 232 -NHFQTV--GFKKREVELQPETVLNVMKYMQDNGASGSGVSSFGPVVYGIVESSVEAGRL 288
Query: 280 TKVIDSLNDYGIKAEVELGIPRNKGAEIVG 309
K + + D + EV L RN+GA+I G
Sbjct: 289 QKEVQRMLDESLGGEVLLTKGRNRGADIFG 318
>sp|Q58822|YE27_METJA HYPOTHETICAL PROTEIN MJ1427 >gi|2128851|pir||B64478 hypothetical
protein MJ1427 - Methanococcus jannaschii
>gi|1592332|gb|AAB99449.1| (U67584) M. jannaschii
predicted coding region MJ1427 [Methanococcus
jannaschii]
Length = 328
Score = 138 bits (343), Expect = 1e-31
Identities = 108/345 (31%), Positives = 181/345 (52%), Gaps = 56/345 (16%)
Query: 1 MIVRTPRRLHLGMIDPTGSLGRRFGSIGVALEG-GYEIKVTPAGSLTIEADE-------E 52
MI++TP R+H+G+ID GS+GR G IG+ALE +I+ + ++IE D+ E
Sbjct: 1 MIIQTPSRIHMGLIDLNGSIGRVDGGIGLALEEPNIKIEGKESDDISIEFDKKLIEKYGE 60
Query: 53 D--RKVIERV----VKELNLKYETGLDYYIEVRRSIPRHIGLGSTTQLTLAIASAILRIA 106
D + V +RV +K L++ G+D +++ P H GLGS TQL+LA+ I +I
Sbjct: 61 DYIKSVRDRVYNTAIKVLDVIGGEGVD--LKILSLFPAHSGLGSGTQLSLAVGKLISKIY 118
Query: 107 KKEVPIEDVAFSLGRSRESGASLYVFKYGGLVIDGG-----VKDKY-------------P 148
KE+ ++A GR SG + F+YGG +IDGG KDK
Sbjct: 119 NKEMNAYNIAKITGRGGTSGIGIGAFEYGGFLIDGGHSFGKGKDKEDFRPSSASKGVKPA 178
Query: 149 PLVMRHEFPENWAFLLVIPKVKRGLSEEEEKDIMFGSNFGKVEIAKEISHRLLLGLIPAL 208
P++ RH+F +W +L+IPK + + ++E DI + ++I H +L+ ++PA+
Sbjct: 179 PIIFRHDF--DWETILIIPKGEH-VYGKKEVDIFKKYCPVPLNEVEKICHLVLMKMMPAV 235
Query: 209 VERDIESFGRFLSEIQELVGSHFSTFQGGTFREDIGIIVEILKEL------TYGAGQSSW 262
VE++++ FG ++++Q L G + ++ + +I+K+L AG SS+
Sbjct: 236 VEKNLDDFGEVINKLQYL----------GFKKVELSLQSDIVKDLINELHKDVYAGLSSF 285
Query: 263 GPTVYGLIKKEEFNLVKTKVIDSLNDYGIKAEVELGIPRNKGAEI 307
GPT+Y K+ L+ K D + YG+ E+ + N G +I
Sbjct: 286 GPTIYAFGDKK---LIVEKANDIFDKYGVYGEIIITKANNVGHKI 327
>gi|11499671 conserved hypothetical protein [Archaeoglobus fulgidus]
>gi|3183451|sp|O28190|YK89_ARCFU HYPOTHETICAL PROTEIN
AF2089 >gi|7429725|pir||H69510 conserved hypothetical
protein AF2089 - Archaeoglobus fulgidus
>gi|2648456|gb|AAB89167.1| (AE000960) conserved
hypothetical protein [Archaeoglobus fulgidus]
Length = 313
Score = 136 bits (339), Expect = 3e-31
Identities = 101/324 (31%), Positives = 158/324 (48%), Gaps = 35/324 (10%)
Query: 3 VRTPRRLHLGMIDPTGSLGRRFGSIGVALEGGY-EIKVTPAGSLTIEADEEDRKVIERVV 61
+RTP R+H+ +ID GS+GR G +G+ALE + EIK + + ++ + +R+ E +
Sbjct: 4 LRTPSRIHITLIDLNGSIGRVDGGVGLALEEPHIEIKAKESETFVLKGEPINRERFE--I 61
Query: 62 KELNLKYETGLDYYIEVRRSIPRHIGLGSTTQLTLAIASAILRIAKKEVPIEDVAFSLGR 121
+ G IEV H+GLGS TQ++LA+ A + + +A +GR
Sbjct: 62 AAAKMAEYCGRGAEIEVVSDYDAHVGLGSGTQISLAVGRAFSELYGLNLTTRQIAEIMGR 121
Query: 122 SRESGASLYVFKYGGLVIDGG--------------VKDKYPPLVMRHEFPENWAFLLVIP 167
SG + VF +GGLV+DGG + K P++ R +FP+ W +L IP
Sbjct: 122 GGTSGIGVAVFDHGGLVVDGGHSTKEKKSFLPSSASRAKPAPMIARLDFPD-WNVVLAIP 180
Query: 168 KVKRGLSEEEEKDIMFGSNFGKVEIAKEISHRLLLGLIPALVERDIESFGRFLSEIQELV 227
+K G E E ++ S +E +EI H +L+ ++PA+VE D++ FG+ L IQEL
Sbjct: 181 DLK-GFFGEREVNLFQKSCPVPLEDVREICHLILMKMLPAVVEADLDEFGKALKRIQELG 239
Query: 228 GSHFSTFQGGTFREDIGIIVEILKELTYGAGQSSWGPTVYGLIKKEEFNLVKTKVIDSLN 287
E G +++ +L G SS GPTVY + + + SL
Sbjct: 240 FKKAEV-------EQYGELIKGCFDLADCIGMSSTGPTVYAITDSNAGGIER-----SLR 287
Query: 288 DY----GIKAEVELGIPRNKGAEI 307
DY G + + RN+G EI
Sbjct: 288 DYFAEKGYECRTIVTKARNRGVEI 311
>sp|O26918|Y830_METTH HYPOTHETICAL PROTEIN MTH830 >gi|7429726|pir||G69210 conserved
hypothetical protein MTH830 - Methanobacterium
thermoautotrophicum (strain Delta H)
>gi|2621920|gb|AAB85328.1| (AE000860) conserved protein
[Methanobacterium thermoautotrophicum]
Length = 329
Score = 126 bits (314), Expect = 3e-28
Identities = 88/301 (29%), Positives = 142/301 (46%), Gaps = 27/301 (8%)
Query: 1 MIVRTPRRLHLGMIDPTGSLGRRFGSIGVALEG-----GYEIKVTPAGSLTIEAD----E 51
+I+ TP RLHL +ID G GR G +G+ L G E T A+ E
Sbjct: 5 LIINTPSRLHLTLIDLNGERGRLDGGVGITLNEPELVVGLEASDDMGVEFTSHAEGKLRE 64
Query: 52 EDRKVIERVVKELNLKYETGLDYYIEVRRSIPRHIGLGSTTQLTLAIASAILRIAKKEVP 111
E R I + + ++ VR P H GLGS TQL+LA A + +
Sbjct: 65 EYRSKIMEAARRTLKHIGSDEKFHFTVRSMFPAHSGLGSGTQLSLATARLVAEYHGMKFT 124
Query: 112 IEDVAFSLGRSRESGASLYVFKYGGLVIDGGVKDKY--------------PPLVMRHEFP 157
++A +GR SG + F+ GG ++D G + PP++ R++FP
Sbjct: 125 ARELAHIVGRGGTSGIGVASFEDGGFIVDAGHSSREKSDFLPSSASSASPPPVIARYDFP 184
Query: 158 ENWAFLLVIPKVKRGLSEEEEKDIMFGSNFGKVEIAKEISHRLLLGLIPALVERDIESFG 217
E W ++ IP++ R +S E +I + + +SH +L+ ++PA++E DIE+FG
Sbjct: 185 EEWNIIIAIPEIDRSVSGRREVNIFQEYCPLPLRDVERLSHIILMKMMPAILEGDIEAFG 244
Query: 218 RFLSEIQELVGSHFSTFQGGTFREDIGIIVE-ILKELTYGAGQSSWGPTVYGLIKKEEFN 276
++EIQ G+ F + I I++ ++ GAG SS+GP VY + ++ N
Sbjct: 245 ESVNEIQ---GTGFKRIERELQDPLIDRIIDSMISAGAPGAGMSSFGPAVYSVTDEKPGN 301
Query: 277 L 277
+
Sbjct: 302 V 302
>pir||H72472 hypothetical protein APE2425 - Aeropyrum pernix (strain K1)
>gi|5106129|dbj|BAA81440.1| (AP000064) 326aa long
hypothetical protein [Aeropyrum pernix]
Length = 326
Score = 117 bits (290), Expect = 2e-25
Identities = 87/280 (31%), Positives = 143/280 (51%), Gaps = 13/280 (4%)
Query: 3 VRTPRRLHLGMIDPTGSLGRRFGSIGVAL-EGGYEIKVTPAGSLTIEADEEDRKVIERVV 61
V P +H G D GS+GR +G++G+AL E ++ +P+ S+ +E R+ +
Sbjct: 7 VSAPSHVHAGNYDIEGSIGRLYGTVGLALGEPRLTLEASPSHSVEVEGGSRRREAEDLAR 66
Query: 62 KELNLKYETGL---DYYIEVRRSIPRHIGLGSTTQLTLAIASAILRIAKKE-VPIEDVAF 117
L+ G I + IP H+GLGSTT L L+I S+I RI E + + ++A
Sbjct: 67 LYLDKVGSRGCRLEGVKIRIYEEIPAHVGLGSTTALALSIGSSIYRICGLEPLDLRELAV 126
Query: 118 SLGRSRESGASLYVFKYGGLVIDGGV---KDKYPPLVMRHEFPENWAFLLVIPK--VKRG 172
+ GRS S LY F+ GGL++DGG + + PPLV R P + ++ +P+ + +
Sbjct: 127 TAGRSLVSALGLYSFEQGGLIVDGGFVRGERRPPPLVFRAHVPGSVKVVVALPERPIAKI 186
Query: 173 LS-EEEEKDIMFGSNFGKVEIAKEISHRLLLGLIPALVERDIESFGRFLSEIQELVGSHF 231
L + E +++ +A S +LLG++ E R++ E +G ++
Sbjct: 187 LDIKRREDELLARMPPMDPSMAGWASRVVLLGIMANAAEGRWGEAARWMGEFNRRLGEYW 246
Query: 232 STFQGGTF-REDIGIIVEILKELTYGAG-QSSWGPTVYGL 269
+ QGG + ++ IV + + +G QSSWGPTVYGL
Sbjct: 247 AGEQGGIYCCSEVEEIVRAMVDAGAWSGLQSSWGPTVYGL 286
>pir||A72632 hypothetical protein APE1512 - Aeropyrum pernix (strain K1)
>gi|5105197|dbj|BAA80511.1| (AP000061) 307aa long
hypothetical protein [Aeropyrum pernix]
Length = 307
Score = 115 bits (286), Expect = 6e-25
Identities = 90/301 (29%), Positives = 139/301 (45%), Gaps = 19/301 (6%)
Query: 8 RLHLG--MIDPTGSLGRRFGSIGVALEGG-YEIKVTPAGSLTIEADEEDRKVIERVVKEL 64
RLH G ++DP + +G G +E ++ G E D + ++ER
Sbjct: 12 RLHAGFHIVDPQRGV---WGGAGFYVEEPRVRVEAWDCGEARWEVDSDIATLLERA---- 64
Query: 65 NLKYETGLDY-YIEVRRSIPRHIGLGSTTQLTLAIASAILRIAKKEVPIEDVAFSLGRSR 123
GL + +++ PRH+GLGSTTQL+LA + A+L + I +A LGR R
Sbjct: 65 ------GLAWGCLKIASRPPRHMGLGSTTQLSLAASMALLALKGLRPSIPSLAARLGRGR 118
Query: 124 ESGASLYVFKYGGLVIDGGVKDKYPPLVMRHEFPENWAFLLVIPKVKRGLSEEEEKDIMF 183
S + +GG V+D G P +R PE+W F+LVIP+++ G E +D+
Sbjct: 119 FSAVGTLLAVHGGFVLDSGSVSTPPISAVR--VPEDWRFVLVIPQLEPGFEEGRAEDLAL 176
Query: 184 GSNFGKVEIAKEISHRLLLGLIPALVERDIESFGRFLSEIQELVGSHFSTFQGGTFREDI 243
+ + ++ R L L + D++ LS +Q G F QG FR D+
Sbjct: 177 KTAGLRAARGGDLRSRGALLLAVGIARGDLDIALEGLSSMQAGTGLLFQEVQGAVFRRDL 236
Query: 244 GIIVEILKELTYGAGQSSWGPTVYGLIKKEEFNLVKTKVIDSLNDYGIKAEVELGIPRNK 303
IV+ QSSWGPT+Y + + + + L +GI+ EV + PRNK
Sbjct: 237 MNIVDEASRNGVKLAQSSWGPTLYTISHESTADSDARMLRAILRSHGIRGEVLVTRPRNK 296
Query: 304 G 304
G
Sbjct: 297 G 297
>gb|AAK40700.1| Conserved hypothetical protein [Sulfolobus solfataricus]
Length = 292
Score = 87.0 bits (212), Expect = 3e-16
Identities = 76/280 (27%), Positives = 123/280 (43%), Gaps = 41/280 (14%)
Query: 8 RLHLGMIDPTGSLGRRFGSIGVALEGGYEIKVTPAGSLTIEADEEDRKVIERVVKELNLK 67
R+H+ + D G GR G GVAL+ Y V +G+ E++L
Sbjct: 9 RIHITLFDLEGKYGRLDGGAGVALK--YPRIVVRSGNC--------------FKPEVSLP 52
Query: 68 YETGLDYYIEVRRSIPRHIGLGSTTQLTLAIASAILRIAKKEVPIEDVAFSLGRSRESGA 127
++ I + +HIGLG TTQ L++A K + ++A + R SG
Sbjct: 53 FDVPK---ICIEEDFEQHIGLGHTTQYLLSVAKLAAEYNFKRLNSYELAKLVKRGGTSGV 109
Query: 128 SLYVFKYGGLVIDGGVKDKY--------------PPLVMRHEFPENWAFLLVIPKVKRGL 173
+Y F+YGG ++DGG K PPL+ R FP W + V RG
Sbjct: 110 GVYAFEYGGFIVDGGHSTKVKRELLPSDFSSAPPPPLIARLNFP--W---YIYVNVVRGG 164
Query: 174 SEEEEKDIMFGSNFGKVEIAKEISHRLLLGLIPALVERDIESFGRFLSEIQELVGSHFST 233
KD + K+E ++ +L+ LIP++ ERD+E +S IQ+L F
Sbjct: 165 RRVFGKDEINAFKQAKLEGLDTLARVVLMELIPSVAERDLEGALNAISLIQDL---GFKK 221
Query: 234 FQGGTFREDIGIIVEILKELTYGAGQSSWGPTVYGLIKKE 273
+ +++ ++ + + + AG SS+GP VY + +
Sbjct: 222 VEVFLQTDEVKKLMNDMVKAGFPAGLSSFGPAVYTFVSSK 261
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.319 0.142 0.398
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 123149364
Number of Sequences: 2977
Number of extensions: 5497102
Number of successful extensions: 12871
Number of sequences better than 1.0e-10: 12
Number of HSP's better than 0.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 12833
Number of HSP's gapped (non-prelim): 12
length of query: 322
length of database: 189,106,746
effective HSP length: 56
effective length of query: 266
effective length of database: 155,591,474
effective search space: 41387332084
effective search space used: 41387332084
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 165 (68.7 bits)