BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB1696 (PAB1696) DE:ABC transporter, ATP-binding protein
(253 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||H75077 abc transporter, ATP-binding protein PAB1696 - Pyroc... 490 e-138
pir||H71066 probable ATP-binding transport protein - Pyrococcus ... 440 e-123
gi|11498739 ABC transporter, ATP-binding protein [Archaeoglobus ... 260 1e-68
emb|CAC11214.1| (AL445063) gliding motility protein (gldA) relat... 259 2e-68
pir||B72334 ABC transporter, ATP-binding protein - Thermotoga ma... 218 5e-56
gi|11498005 ABC transporter, ATP-binding protein [Archaeoglobus ... 194 1e-48
pir||E72364 ABC transporter, ATP-binding protein - Thermotoga ma... 190 1e-47
gb|AAK42722.1| ABC transporter, ATP binding protein [Sulfolobus ... 190 2e-47
pir||C69049 ABC transporter (ATP-binding protein) - Methanobacte... 185 6e-46
gb|AAG20087.1| (AE005088) ABC transport protein; Trp2 [Halobacte... 179 2e-44
pir||G69803 ABC transporter (ATP-binding protein) homolog yfiL -... 175 6e-43
pir||S76626 ABC-type transport protein sll0489 - Synechocystis s... 173 1e-42
gb|AAG20956.1| (AE005162) daunorubicin resistance ABC transporte... 173 1e-42
emb|CAB95908.1| (AL359988) putative ABC transport system ATP-bin... 172 3e-42
sp|Q58429|YA23_METJA HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 172 4e-42
pir||E75108 daunorubicin resistance ATP-binding protein (drra-1)... 170 1e-41
pir||E75122 hypothetical protein PAB1845 - Pyrococcus abyssi (st... 170 2e-41
gi|11499468 daunorubicin resistance ATP-binding protein (drrA) [... 169 2e-41
gi|11498736 ABC transporter, ATP-binding protein [Archaeoglobus ... 167 1e-40
pir||A75184 ATP-binding transport protein PAB0434 - Pyrococcus a... 167 1e-40
pir||G71131 probable ATP-binding protein - Pyrococcus horikoshii... 165 5e-40
pir||A70194 ABC transporter, ATP-binding protein homolog - Lyme ... 165 5e-40
pir||H71008 probable ATP-binding transport protein - Pyrococcus ... 164 9e-40
pir||D72257 hypothetical protein TM1403 - Thermotoga maritima (s... 163 2e-39
pir||B69065 ABC transporter (ATP-binding, daunorubicin resistanc... 163 2e-39
pir||F82572 sodium ABC transporter ATP-binding protein XF2329 [i... 163 2e-39
pir||D72492 probable ABC transporter ATP-binding protein APE2579... 163 2e-39
pir||A83142 probable ATP-binding component of ABC transporter PA... 163 2e-39
sp|P55339|ECSA_BACSU ABC-TYPE TRANSPORTER ATP-BINDING PROTEIN EC... 162 3e-39
sp|P46903|NATA_BACSU ATP-BINDING TRANSPORT PROTEIN NATA (NA+ ABC... 162 3e-39
emb|CAC11378.1| (AL445063) gliding motility protein related [The... 162 3e-39
pir||H75157 daunorubicin resistance ATP-binding protein (drra-2)... 162 5e-39
pir||C83188 probable ATP-binding component of ABC transporter PA... 161 8e-39
pir||C71081 probable resistance ATP-binding protein - Pyrococcus... 161 1e-38
gi|11498626 ABC transporter, ATP-binding protein [Archaeoglobus ... 159 2e-38
pir||B64816 ABC-type transport protein ybhF - Escherichia coli >... 159 2e-38
sp|P75776|YBHF_ECOLI HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 159 2e-38
dbj|BAB04722.1| (AP001510) ABC transporter (ATP-binding protein)... 159 3e-38
dbj|BAA75396.1| (AB013378) YhaQ [Bacillus halodurans] 159 3e-38
pir||S74048 probable daunorubicin resistance protein - Sulfolobu... 158 5e-38
gb|AAK42315.1| ABC transporter, ATP binding protein. [Sulfolobus... 158 5e-38
pir||B71030 probable ATP-binding transport protein - Pyrococcus ... 158 7e-38
pir||S76278 ABC-type transport protein sll0759 - Synechocystis s... 158 7e-38
dbj|BAB05817.1| (AP001514) ABC transporter (ATP-binding protein)... 157 9e-38
pir||B75459 sodium extrusion protein NatA - Deinococcus radiodur... 157 9e-38
pir||C71197 probable ATP-binding transport protein - Pyrococcus ... 157 1e-37
dbj|BAB04910.1| (AP001511) ABC transporter (ATP-binding protein)... 157 2e-37
pir||C72303 ABC transporter, ATP-binding protein - Thermotoga ma... 157 2e-37
gb|AAG19180.1| (AE005015) ABC transporter, ATP-binding protein; ... 155 5e-37
pir||A75083 ATP-binding transport protein PAB1668 - Pyrococcus a... 155 5e-37
pir||C72568 probable ATP-binding transport protein APE1829 - Aer... 154 8e-37
gb|AAG19009.1| (AE005000) daunorubicin resistance ABC transporte... 153 1e-36
sp|P54592|YHCH_BACSU HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 153 2e-36
pir||I40516 spaF protein - Bacillus subtilis 153 2e-36
pir||A70082 ABC transporter (ATP-binding protein) homolog yxlF -... 153 2e-36
dbj|BAB04773.1| (AP001510) transposase (08)/ABC transporter (ATP... 153 2e-36
dbj|BAA83955.1| (AB024563) YFIL [Bacillus halodurans] 152 4e-36
pir||E69771 ABC transporter (ATP-binding protein) homolog ydbJ -... 152 4e-36
gb|AAK42548.1| ABC transporter, ATP binding protein [Sulfolobus ... 151 7e-36
gb|AAB91597.1| (U09819) SpaF [Bacillus subtilis] 151 7e-36
emb|CAB60255.1| (AJ250862) MrsF protein [Bacillus sp. HIL-Y85/54... 151 7e-36
gb|AAC36155.1| (AF003632) PilH [Myxococcus xanthus] 151 9e-36
dbj|BAB08166.1| (AB030831) SrtF [Streptococcus pyogenes] 150 2e-35
pir||T44443 gliding motility protein [imported] - Flavobacterium... 150 2e-35
emb|CAB37661.1| (AJ224479) cdd4-like protein [Bacillus sphaericus] 149 3e-35
pir||S75436 hypothetical protein c05019 - Sulfolobus solfataricu... 147 1e-34
gb|AAK40417.1| ABC transporter, ATP binding protein [Sulfolobus ... 147 1e-34
pir||H70610 probable ABC-typetransmembrane transport portein - M... 146 2e-34
dbj|BAB07698.1| (AP001520) ABC transporter (ATP-binding protein)... 146 2e-34
gb|AAC62423.1| (AF084104) NatA [Bacillus firmus] 146 3e-34
pir||T36523 probable ABC-type transport system ATP-binding prote... 146 3e-34
dbj|BAB04885.1| (AP001511) ABC transporter (ATP-binding protein)... 145 4e-34
emb|CAC11986.1| (AL445065) ABC transporter cdd4-like protein Scn... 145 4e-34
dbj|BAB07612.1| (AP001520) ABC transporter (ATP-binding protein)... 144 9e-34
pir||F82303 ABC transporter, ATP-binding protein VC0589 [importe... 143 2e-33
sp|P72335|NODI_RHIS3 NODULATION ATP-BINDING PROTEIN I >gi|153162... 143 3e-33
gb|AAF99566.1| (AF167161) unknown [Staphylococcus aureus] 143 3e-33
sp|P22040|Y415_SYNY3 HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 142 3e-33
gi|11498611 ABC transporter, ATP-binding protein [Archaeoglobus ... 142 3e-33
gb|AAF04137.1|AF191033_5 (AF191033) hypothetical ABC transporter... 142 3e-33
dbj|BAB06933.1| (AP001518) ABC transporter (ATP-binding protein)... 142 3e-33
emb|CAC08414.1| (AL392178) putative ABC transport system ATP-bin... 142 3e-33
gb|AAD16030.1| (AF082183) ABC transporter MutF [Streptococcus mu... 142 4e-33
emb|CAB93668.1| (AJ276653) RumF protein [Ruminococcus gnavus] 142 4e-33
emb|CAC11998.1| (AL445065) ABC transporter related protein [Ther... 141 6e-33
pir||S47705 hypothetical protein f648 - Escherichia coli >gi|912... 141 8e-33
pir||C69819 ABC transporter (ATP-binding protein) homolog yhaQ -... 141 8e-33
sp|P37624|YHIH_ECOLI HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 141 8e-33
sp|P42332|BCRA_BACLI BACITRACIN TRANSPORT ATP-BINDING PROTEIN BC... 140 2e-32
pir||H72301 ABC transporter, ATP-binding protein - Thermotoga ma... 140 2e-32
pir||B75076 daunorubicin resistance ATP-binding protein drra PAB... 140 2e-32
gi|11498898 ABC transporter, ATP-binding protein [Archaeoglobus ... 139 2e-32
gb|AAD44229.1|AF143772_35 (AF143772) DrrA [Mycobacterium avium] 139 2e-32
gb|AAG20473.1| (AE005119) copper transport ATP-binding protein; ... 139 3e-32
pir||G82993 probable ATP-binding/permease fusion ABC transporter... 138 5e-32
dbj|BAB16596.1| (AB037937) ABC2 [Rattus norvegicus] 138 5e-32
pir||A59189 ATP-binding cassette transporter - human (fragment) ... 138 7e-32
gb|AAG09372.1|AF178941_1 (AF178941) ATP-binding cassette sub-fam... 138 7e-32
gb|AAG32068.1|AF317790_1 (AF317790) ATP-binding transporter AviA... 138 7e-32
pir||S34187 probable ABC-type transport protein TnrB2 - Streptom... 138 9e-32
pir||T31682 bcrA protein - Bacillus licheniformis >gi|4464278|gb... 138 9e-32
pir||F72742 probable transport ATP-binding protein APE0471 - Aer... 138 9e-32
pir||E72636 probable nodulation ATP-binding protein I APE1548 - ... 138 9e-32
pir||D70984 probable drrA protein - Mycobacterium tuberculosis (... 137 1e-31
pir||T36316 probable ABC-type transport system ATP-binding prote... 137 1e-31
gb|AAD20382.1| (AF125999) daunorubicin resistance protein A [Myc... 136 2e-31
dbj|BAB04009.1| (AP001508) ABC transporter (ATP-binding protein)... 136 2e-31
gi|6005701 ATP-binding cassette, sub-family A member 8 [Homo sap... 136 3e-31
pir||D72484 probable ATP-binding protein APE2516 - Aeropyrum per... 136 3e-31
dbj|BAB04164.1| (AP001508) ABC transporter (ATP-binding protein)... 136 3e-31
pir||S73019 daunorubicin resistance protein drrA - Mycobacterium... 135 4e-31
pir||C69012 ABC transporter (ATP-binding, daunorubicin resistanc... 135 6e-31
emb|CAC11370.1| (AL445063) gliding motility protein related [The... 135 6e-31
pir||C69993 ABC transporter (ATP-binding protein) homolog ythP -... 134 7e-31
gb|AAC02761.2| (AC002339) putative ABC transporter [Arabidopsis ... 134 7e-31
pir||T00826 hypothetical protein T32G6.22 - Arabidopsis thaliana... 134 7e-31
gb|AAF99691.1|AF267498_1 (AF267498) MutF [Streptococcus mutans] 134 7e-31
gb|AAK41395.1| ABC transporter, ATP binding protein [Sulfolobus ... 134 1e-30
pir||S42925 probable transport protein - Staphylococcus aureus >... 134 1e-30
gi|10956101 ABC transporter subunit PenL [Pediococcus pentosaceu... 134 1e-30
emb|CAB76006.1| (AL157916) putative ABC transporter, ATP-binding... 134 1e-30
emb|CAB53353.1| (AJ010260) NosF protein [Paracoccus denitrificans] 134 1e-30
emb|CAC08315.1| (AL392149) putative ABC transport system ATP-bin... 134 1e-30
dbj|BAB04167.1| (AP001508) ABC transporter (ATP-binding protein)... 134 1e-30
pir||H72269 ABC transporter, ATP-binding protein - Thermotoga ma... 133 2e-30
pir||T47150 hypothetical protein DKFZp547P193.1 - human (fragmen... 133 2e-30
gb|AAF81232.1| (AF263012) ABC transporter ATP binding protein [S... 133 2e-30
gb|AAK42130.1| Antibiotic ABC transporter ATP binding protein [S... 133 2e-30
pir||E72384 ABC transporter, ATP-binding protein - Thermotoga ma... 133 2e-30
pir||E81337 ABC-transporter ATP-binding protein Cj0669 [imported... 132 4e-30
gb|AAB61163.1| (U77778) putative ABC transporter subunit [Staphy... 132 5e-30
pir||T36344 probable ABC-type transport system ATP-binding prote... 132 5e-30
emb|CAB94554.1| (AL359152) putative ABC transporter, ATP-binding... 132 5e-30
gb|AAC44357.1| (U43537) ATP-binding protein involved in mithramy... 131 6e-30
dbj|BAA95019.1| (AB033992) ATP-binding protein [Streptomyces kas... 131 6e-30
sp|P45073|YHBG_HAEIN PROBABLE ABC TRANSPORTER ATP-BINDING PROTEI... 131 8e-30
gb|AAK41557.1| Antibiotic ABC transporter, ATP binding protein [... 131 1e-29
gb|AAG34388.1|AF197468_4 (AF197468) ATP/GTP binding protein; Nos... 130 1e-29
sp|P32010|DRRA_STRPE DAUNORUBICIN RESISTANCE ATP-BINDING PROTEIN... 130 2e-29
pir||S42927 probable transport protein - Staphylococcus epidermi... 130 2e-29
pir||S42931 probable transport protein stpB - Staphylococcus hom... 130 2e-29
sp|P36879|YADG_ECOLI HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 129 2e-29
gi|11498586 osmoprotection protein (proV) [Archaeoglobus fulgidu... 129 2e-29
pir||C65111 probable ABC transporter (ntrA/rpoN 5'region) - Esch... 129 3e-29
pir||C70529 probable ABC transporter - Mycobacterium tuberculosi... 129 3e-29
sp|P41234|ABC2_MOUSE ATP-BINDING CASSETTE TRANSPORTER 2 >gi|1082... 128 6e-29
pir||B72582 probable nodulation ATP-binding protein APE1934 - Ae... 128 6e-29
sp|P31220|YHBG_ECOLI PROBABLE ABC TRANSPORTER ATP-BINDING PROTEI... 128 7e-29
gb|AAD43475.1|AF125260_3 (AF125260) NosF [Rhodobacter sphaeroide... 128 7e-29
gb|AAK41504.1| ABC transporter, ATP binding protein [Sulfolobus ... 127 2e-28
emb|CAA67415.1| (X98917) orf4 [Methanopyrus kandleri] 127 2e-28
pir||T36764 probable ABC-type transport system ATP-binding prote... 127 2e-28
gi|9506365 ATP-binding cassette, sub-family A (ABC1), member 7 [... 126 2e-28
dbj|BAB04537.1| (AP001509) bacitracin ABC transporter (ATP-bindi... 126 2e-28
gi|11427664 ATP-binding cassette, sub-family A (ABC1), member 7 ... 126 2e-28
pir||T29454 ABC transport protein - Streptomyces coelicolor >gi|... 126 3e-28
dbj|BAB07200.1| (AP001518) ABC transporter (ATP-binding protein)... 125 4e-28
emb|CAB88835.1| (AL353832) putative ABC-transport protein, ATP-b... 125 5e-28
gb|AAF50837.1| (AE003568) CG1718 gene product [Drosophila melano... 125 6e-28
pir||H75288 ABC transporter, ATP-binding protein - Deinococcus r... 124 8e-28
pir||T18288 ABC transport protein - slime mold (Dictyostelium di... 123 1e-27
pir||D75609 amino acid ABC transporter, ATP-binding protein - De... 123 1e-27
emb|CAC11868.1| (AL445065) ATP-binding protein related resistanc... 123 1e-27
pir||F71654 ABC transporter ATP-binding protein (abcT2) RP508 - ... 123 2e-27
pir||T22748 hypothetical protein F55G11.9 - Caenorhabditis elega... 123 2e-27
gb|AAB61132.1| (U61158) GdmF [Staphylococcus gallinarum] 123 2e-27
gb|AAC44025.1| (U47133) NosF protein [Sinorhizobium meliloti] >g... 122 3e-27
gb|AAB08067.1| (U67179) ORF2 [Xanthomonas campestris] 122 3e-27
gb|AAF44814.1|AE003406_19 (AE003416) symbol=BG:DS00797.5; predic... 122 3e-27
emb|CAB94566.1| (AL359152) putative ABC transporter ATP-binding ... 122 3e-27
pir||T45265 cobalt transport ATP-binding protein O homolog [impo... 122 4e-27
sp|P75444|YD34_MYCPN HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 122 4e-27
pir||JC5348 cdd4 protein - Clostridium difficile >gi|1770140|emb... 122 4e-27
pir||G75548 ABC transporter, ATP-binding protein - Deinococcus r... 122 5e-27
pir||S60124 transport protein homolog C48B4.4 - Caenorhabditis e... 121 9e-27
pir||T42749 ATP-binding cassette transport protein homolog - Cae... 121 9e-27
sp|P34358|YLH4_CAEEL PUTATIVE ABC TRANSPORTER C48B4.4 IN CHROMOS... 121 9e-27
emb|CAA82383.2| (Z29117) contains similarity to Pfam domain: PF0... 121 9e-27
emb|CAA82384.2| (Z29117) contains similarity to Pfam domain: PF0... 121 9e-27
emb|CAC08286.1| (AL392148) putative ABC transporter ATP-binding ... 120 2e-26
pir||E70337 ABC transporter - Aquifex aeolicus >gi|2983089|gb|AA... 119 3e-26
pir||E83222 NosF protein PA3394 [imported] - Pseudomonas aerugin... 119 3e-26
gi|11498338 cobalt transport ATP-binding protein (cbiO-1) [Archa... 119 4e-26
pir||C72336 ABC transporter, ATP-binding protein - Thermotoga ma... 119 4e-26
sp|P54537|YQIZ_BACSU PROBABLE AMINO-ACID ABC TRANSPORTER ATP-BIN... 118 5e-26
gb|AAC43327.1| (U17255) NisF [Lactococcus lactis] >gi|1095449|pr... 118 6e-26
pir||C71237 probable transport-ATP binding protein - Pyrococcus ... 118 6e-26
pir||G75203 abc transporter, ATP-binding protein PAB0103 - Pyroc... 118 6e-26
pir||S49597 ATP-binding protein - Lactococcus lactis >gi|575301|... 118 8e-26
pir||E82210 amino acid ABC transporter, ATP-binding protein VC13... 117 1e-25
sp|O34992|OPCA_BACSU GLYCINE BETAINE/CARNITINE/CHOLINE TRANSPORT... 116 3e-25
emb|CAB99138.1| (AL390188) putative ABC transport system ATP-bin... 116 3e-25
gi|10957143 Potential ABC transporter [Lactococcus lactis] >gi|1... 115 4e-25
pir||T27121 hypothetical protein Y53C10A.9 - Caenorhabditis eleg... 115 4e-25
pir||G72598 probable ABC transporter ATP-binding protein APE1255... 115 5e-25
pir||B71234 probable transport protein - Pyrococcus horikoshii >... 113 2e-24
gb|AAF91339.1|AF249729_1 (AF249729) ATPase OpuCA [Listeria monoc... 113 2e-24
pir||T36288 probable ABC-type transport system ATP-binding chain... 113 2e-24
dbj|BAA15193.1| (D90793) Ribose transport ATP-binding protein Rb... 112 4e-24
sp|P77257|EGO_ECOLI PUTATIVE ABC TRANSPORTER ATP-BINDING PROTEIN... 112 4e-24
gb|AAC17172.1| (AF065141) ABC transporter ATP-binding protein ho... 112 4e-24
dbj|BAB03891.1| (AP001507) amino acid ABC transporter (ATP-bindi... 111 8e-24
sp|P44785|ABC_HAEIN ATP-BINDING PROTEIN ABC >gi|1073885|pir||C64... 110 2e-23
gb|AAD32038.1|AF093787_6 (AF093787) ABC transporter homolog CylA... 109 4e-23
gb|AAF56807.1| (AE003766) CG9990 gene product [Drosophila melano... 109 4e-23
pir||D70020 ABC transporter (ATP-binding protein) homolog yusC -... 107 1e-22
gi|11498492 ribose ABC transporter, ATP-binding protein (rbsA-1)... 107 2e-22
pir||H75161 ribose abc transporter, ATP-binding protein (rbsa) P... 104 8e-22
pir||C75077 iron (iii) abc transporter, ATP-binding protein (hem... 104 1e-21
pir||C75593 probable ABC transporter, ATP-binding protein - Dein... 103 2e-21
emb|CAB97433.1| (AL389898) putative glycine betaine ABC transpor... 102 4e-21
pir||F75377 ABC transporter, ATP-binding protein - Deinococcus r... 101 7e-21
sp|P54954|YXEO_BACSU PROBABLE AMINO-ACID ABC TRANSPORTER ATP-BIN... 100 3e-20
pir||E83478 probable ATP-binding component of ABC transporter PA... 99 3e-20
pdb|1B0U|A Chain A, Atp-Binding Subunit Of The Histidine Permeas... 99 5e-20
gb|AAK43187.1| ABC transporter, ATP binding protein, putative [S... 99 5e-20
pir||D35718 phnC protein - Escherichia coli >gi|147196|gb|AAA243... 99 5e-20
sp|P16677|PHNC_ECOLI PHOSPHONATES TRANSPORT ATP-BINDING PROTEIN ... 99 5e-20
sp|P04983|RBSA_ECOLI RIBOSE TRANSPORT ATP-BINDING PROTEIN RBSA >... 99 6e-20
gb|AAA62102.1| (L10328) high affinity ribose transport protein [... 99 6e-20
gb|AAD29104.1|AF039835_1 (AF039835) ATPase homolog GbuA [Listeri... 99 6e-20
sp|P14175|PROV_ECOLI GLYCINE BETAINE/L-PROLINE TRANSPORT ATP-BIN... 98 8e-20
sp|O34900|YTMN_BACSU PROBABLE AMINO-ACID ABC TRANSPORTER ATP-BIN... 98 1e-19
sp|P17328|PROV_SALTY GLYCINE BETAINE/L-PROLINE TRANSPORT ATP-BIN... 98 1e-19
pir||B45917 nucleotide-binding protein proV - Salmonella typhimu... 98 1e-19
pir||G72418 sugar ABC transporter, ATP-binding protein - Thermot... 97 2e-19
gb|AAF53328.1| (AE003641) CG7491 gene product [Drosophila melano... 97 2e-19
pir||C64496 ABC transporter ATP-binding protein - Methanococcus ... 96 4e-19
sp|Q57855|Y412_METJA HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 95 9e-19
pir||T47652 ABC transporter-like protein - Arabidopsis thaliana ... 95 9e-19
dbj|BAB07378.1| (AP001519) teichoic acid ABC transporter (ATP-bi... 95 9e-19
pir||T35450 ABC transporter ATP binding protein - Streptomyces c... 94 1e-18
pir||S76273 hypothetical protein - Synechocystis sp. (strain PCC... 94 2e-18
sp|P42954|TAGH_BACSU TEICHOIC ACID TRANSLOCATION ATP-BINDING PRO... 92 6e-18
pir||T00089 ABC transporter rgpDc - Streptococcus mutans >gi|339... 92 8e-18
dbj|BAB07449.1| (AP001519) ribose ABC transporter (ATP-binding p... 91 1e-17
pir||A82497 ribose ABC transporter, ATP-binding protein VCA0128 ... 91 1e-17
gi|6679297 P glycoprotein 2 [Mus musculus] >gi|126929|sp|P21440|... 90 2e-17
gb|AAD05298.1| (AF082511) putative ATP-binding protein MglA [Tre... 90 2e-17
pir||T14805 hypothetical protein F15J5.20 - Arabidopsis thaliana... 89 4e-17
emb|CAB78807.1| (AL161547) multidrug resistance protein/P-glycop... 89 4e-17
pir||B72424 oligopeptide ABC transporter, ATP-binding protein - ... 89 7e-17
pir||H69858 cation ABC transporter (ATP-binding protein) homolog... 87 1e-16
sp|P23174|MDR3_CRIGR MULTIDRUG RESISTANCE PROTEIN 3 (P-GLYCOPROT... 86 3e-16
gi|6981354 P-glycoprotein 3/ multidrug resistance 2 [Rattus norv... 85 8e-16
gi|4505771 ATP-binding cassette, subfamily B, member 4, isoform ... 84 1e-15
gi|9961250 ATP-binding cassette, subfamily B, member 4, isoform ... 84 1e-15
gi|9961252 ATP-binding cassette, subfamily B, member 4, isoform ... 84 1e-15
emb|CAA75922.1| (Y15990) P-glycoprotein-like protein [Arabidopsi... 84 2e-15
gb|AAD22644.1|AC007138_8 (AC007138) P-glycoprotein-like protein ... 84 2e-15
dbj|BAB04930.1| (AP001511) ABC transporter (ATP-binding protein)... 84 2e-15
sp|Q50863|RFBB_MYXXA O-ANTIGEN EXPORT SYSTEM ATP-BINDING PROTEIN... 83 4e-15
sp|P42423|YXDL_BACSU HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 82 5e-15
gb|AAD21059.1| (AF119150) RtxB protein [Vibrio cholerae] 82 5e-15
pir||H82198 RTX toxin transporter VC1448 [imported] - Vibrio cho... 82 5e-15
sp|P38053|SSUB_ECOLI PUTATIVE ALIPHATIC SULFONATES TRANSPORT ATP... 82 7e-15
dbj|BAA87071.1| (AB029153) multi-drug resistance related mRNA [F... 80 2e-14
emb|CAB69805.1| (AJ243712) putative ABC-transporter [Bacillus ce... 80 2e-14
gb|AAF50670.1| (AE003563) CG10226 gene product [Drosophila melan... 79 6e-14
gb|AAG28500.1|AF196574_3 (AF196574) FrcA [Sinorhizobium meliloti] 78 7e-14
gb|AAB88659.1| (U62935) multidrug resistance protein 2 [Aspergil... 78 1e-13
gb|AAA79094.1| (U35123) p-glycoprotein [Urechis caupo] 77 2e-13
pir||F75321 ABC transporter, ATP-binding protein, MDR family - D... 77 2e-13
pir||T15237 hypothetical protein F56F4.6 - Caenorhabditis elegan... 76 3e-13
dbj|BAA96918.1| (AB019228) ABC transporter-like protein [Arabido... 76 3e-13
emb|CAB97048.1| (AJ272202) mitochondrial half-ABC transporter [A... 76 3e-13
sp|P26363|CFTR_XENLA CYSTIC FIBROSIS TRANSMEMBRANE CONDUCTANCE R... 76 4e-13
gb|AAA16186.1| (L07065) P-glycoprotein/multidrug resistance prot... 76 4e-13
pir||A47377 multidrug resistance protein Mdr50 - fruit fly (Dros... 76 4e-13
gb|AAC60023.1| (U60209) cystic fibrosis transmembrane conductanc... 76 4e-13
gb|AAF58271.1| (AE003815) Mdr50 gene product [Drosophila melanog... 76 4e-13
dbj|BAA21795.1| (AB000100) malK-like protein [Synechococcus sp.] 75 6e-13
dbj|BAB02858.1| (AB026644) multidrug resistance p-glycoprotein; ... 75 6e-13
dbj|BAA83352.1| (AP000391) ESTs AU067992(C11433),AU077424(C11433... 75 1e-12
sp|P71355|Y663_HAEIN HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 74 1e-12
dbj|BAB07365.1| (AP001519) oligopeptide ABC transporter (ATP-bin... 74 1e-12
emb|CAB88958.1| (AL353864) probable ABC transport protein, ATP-b... 74 2e-12
gb|AAB57756.1| (U44387) unknown [Rhizobium leguminosarum bv. tri... 73 2e-12
emb|CAA73292.1| (Y12758) ABC transporter [Rhizobium leguminosarum] 73 2e-12
pir||T31078 probable ABC-transporter TycE - Brevibacillus brevis... 73 2e-12
pir||JC6139 cystic fibrosis transmembrane conductance regulator ... 73 2e-12
gb|AAC14011.1| (AF013753) cystic fibrosis transmembrane conducta... 73 3e-12
gb|AAC14012.1| (AF016950) cystic fibrosis transmembrane conducta... 73 3e-12
gb|AAD46905.1|AF162400_1 (AF162400) cystic fibrosis transmembran... 73 3e-12
gi|6995996 cystic fibrosis transmembrane conductance regulator, ... 73 4e-12
sp|P13569|CFTR_HUMAN CYSTIC FIBROSIS TRANSMEMBRANE CONDUCTANCE R... 73 4e-12
gb|AAB46340.1| (AC000061) cystic fibrosis transmembrane conducta... 73 4e-12
gb|AAD46907.1|AF162427_1 (AF162427) cystic fibrosis transmembran... 73 4e-12
gi|11422156 cystic fibrosis transmembrane conductance regulator,... 73 4e-12
gb|AAB58738.1| (AF001333) ATP-binding protein [Synechococcus PCC... 72 6e-12
sp|Q00554|CFTR_RABIT CYSTIC FIBROSIS TRANSMEMBRANE CONDUCTANCE R... 71 1e-11
pir||T35192 probable ABC transporter - Streptomyces coelicolor >... 71 1e-11
gb|AAF01067.1|AF189720_1 (AF189720) chloride channel [Oryctolagu... 71 1e-11
sp|Q00555|CFTR_SHEEP CYSTIC FIBROSIS TRANSMEMBRANE CONDUCTANCE R... 69 4e-11
gb|AAK42790.1| ABC transporter, ATP binding protein [Sulfolobus ... 68 8e-11
pir||F71341 probable ribose/galactose ABC transporter rbsA-1 - s... 68 8e-11
>pir||H75077 abc transporter, ATP-binding protein PAB1696 - Pyrococcus abyssi
(strain Orsay) >gi|5458437|emb|CAB49925.1| (AJ248286)
ABC transporter, ATP-binding protein [Pyrococcus abyssi]
Length = 253
Score = 490 bits (1247), Expect = e-138
Identities = 253/253 (100%), Positives = 253/253 (100%)
Query: 1 MIIVENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIV 60
MIIVENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIV
Sbjct: 1 MIIVENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIV 60
Query: 61 GGVEVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAF 120
GGVEVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAF
Sbjct: 61 GGVEVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAF 120
Query: 121 EIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKE 180
EIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKE
Sbjct: 121 EIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKE 180
Query: 181 EGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKEERLEDVFLKLTQAKE 240
EGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKEERLEDVFLKLTQAKE
Sbjct: 181 EGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKEERLEDVFLKLTQAKE 240
Query: 241 EIAQVVSALKEAL 253
EIAQVVSALKEAL
Sbjct: 241 EIAQVVSALKEAL 253
>pir||H71066 probable ATP-binding transport protein - Pyrococcus horikoshii
>gi|3257647|dbj|BAA30330.1| (AP000005) 253aa long
hypothetical ATP-binding transport protein [Pyrococcus
horikoshii]
Length = 253
Score = 440 bits (1120), Expect = e-123
Identities = 214/253 (84%), Positives = 246/253 (96%)
Query: 1 MIIVENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIV 60
MIIVENLRK+FG KEVLKGI+FTV DGEIYGLLGPNGSGKSTTMRILSGIITDFEGKV+V
Sbjct: 1 MIIVENLRKKFGSKEVLKGINFTVNDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVMV 60
Query: 61 GGVEVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAF 120
GV+V++DP++VK IVGYVPETPALYESLTPAEFFSF+GGVR IP+DILEERV++LV+AF
Sbjct: 61 AGVDVSRDPMKVKEIVGYVPETPALYESLTPAEFFSFIGGVRRIPQDILEERVKRLVDAF 120
Query: 121 EIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKE 180
I KYMNQLIGTLSFGTKQKISLIS+LLHDP+VLILDEAMNGLDPKSARIFRELL+EFKE
Sbjct: 121 GIGKYMNQLIGTLSFGTKQKISLISALLHDPQVLILDEAMNGLDPKSARIFRELLFEFKE 180
Query: 181 EGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKEERLEDVFLKLTQAKE 240
EGKSIVFSTH+LALAE++CDR+GIIY+GRI+AEGT++EL+EI++EE+LED+FLKLTQAKE
Sbjct: 181 EGKSIVFSTHILALAEVMCDRIGIIYEGRIVAEGTIDELREIAREEKLEDIFLKLTQAKE 240
Query: 241 EIAQVVSALKEAL 253
E++Q+VSALKEAL
Sbjct: 241 EVSQIVSALKEAL 253
>gi|11498739 ABC transporter, ATP-binding protein [Archaeoglobus fulgidus]
>gi|7445636|pir||B69392 ABC transporter, ATP-binding
protein homolog - Archaeoglobus fulgidus
>gi|2649450|gb|AAB90106.1| (AE001025) ABC transporter,
ATP-binding protein [Archaeoglobus fulgidus]
Length = 232
Score = 260 bits (658), Expect = 1e-68
Identities = 131/234 (55%), Positives = 178/234 (75%), Gaps = 5/234 (2%)
Query: 16 VLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIVGGVEVAKDPLQVKRI 75
+L +SF V + EI GLLGPNGSGKST M+I++G+I EG VIV GV VA++PL+VK +
Sbjct: 1 MLSEVSF-VAENEILGLLGPNGSGKSTLMKIIAGVIPPDEGDVIVNGVSVAENPLKVKEL 59
Query: 76 VGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAFEIKKYMNQLIGTLSF 135
VG+VPETP LYESLT +E FSFVG VR I +L+ERV +L EA E M++L LS
Sbjct: 60 VGFVPETPVLYESLTASELFSFVGAVRKIESSLLKERVERLAEALEFTA-MDELFANLSL 118
Query: 136 GTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKEEGKSIVFSTHVLALA 195
G +QK+S+I+++LH+P VLILDEA NGLD SA++FR+L+++F+EEG+ ++ STH++ +A
Sbjct: 119 GNRQKVSIIAAMLHNPSVLILDEAFNGLDVASAKVFRDLIFQFREEGREVILSTHIMPIA 178
Query: 196 ELICDRVGIIYQGRIIAEGTVEELKEISKEERLEDVFLKLTQAKEEIAQVVSAL 249
E ICDR+ II GRIIA+GT +ELK K+E LEDVFLKLT+ + +I ++ L
Sbjct: 179 ERICDRILIIQNGRIIAQGTPDELK---KDEDLEDVFLKLTKIERDIKPLLEVL 229
>emb|CAC11214.1| (AL445063) gliding motility protein (gldA) related protein
[Thermoplasma acidophilum]
Length = 260
Score = 259 bits (655), Expect = 2e-68
Identities = 118/254 (46%), Positives = 183/254 (71%), Gaps = 3/254 (1%)
Query: 2 IIVENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIVG 61
I ++N+ R+G K L G++ + +G IYG+LGPNGSGK+T MRI+ G++ G IV
Sbjct: 6 IKIDNVSMRYGEKLALDGVTLDIPEGTIYGILGPNGSGKTTLMRIILGLLKQTAGSAIVC 65
Query: 62 GVEVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAFE 121
G + +D +++K I GYVPETP LYES+TP+E FSF+ +R + + RV L++AF
Sbjct: 66 GYDSTRDQMKIKEISGYVPETPILYESMTPSELFSFIASIRRMDEGTFRRRVDALIDAFG 125
Query: 122 IKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKEE 181
I +Y+N+ IG+LSFG +QK+++IS++LHDPK+LI+DE +NGLDP+SA++F+ +L + ++
Sbjct: 126 IAEYINEFIGSLSFGNRQKVAIISAILHDPKILIVDEGINGLDPRSAKLFKSILTDMRDH 185
Query: 182 GKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISK--EERLEDVFLKLTQAK 239
GK IVFSTH+L +AE +CD V I+Y G I+A GT+ +L+ + + LE++FLKLT A
Sbjct: 186 GKIIVFSTHILEIAESLCDHVAILYNGHIVANGTIADLRNEANAPSQNLEEIFLKLTNA- 244
Query: 240 EEIAQVVSALKEAL 253
++I +V L++ +
Sbjct: 245 DDIPEVARYLRDEI 258
>pir||B72334 ABC transporter, ATP-binding protein - Thermotoga maritima (strain
MSB8) >gi|4981322|gb|AAD35875.1|AE001747_18 (AE001747)
ABC transporter, ATP-binding protein [Thermotoga
maritima]
Length = 260
Score = 218 bits (550), Expect = 5e-56
Identities = 103/251 (41%), Positives = 174/251 (69%), Gaps = 3/251 (1%)
Query: 1 MIIVENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIV 60
+I+ L ++FG + I +V+ GEIYG LGPNG+GK+TT+++L+G++ EG+V +
Sbjct: 11 LIVARGLTRKFGDFTAVDHIDLSVRPGEIYGFLGPNGAGKTTTIKMLTGVLKPTEGEVEI 70
Query: 61 GGVEVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAF 120
G++++ +++K+ +G +P+ P +Y LT EF F+ + + ++ +++R+ +L EAF
Sbjct: 71 LGMKMSTHEIEIKKSIGVIPDEPKIYSHLTGKEFLDFIIEIYDLKEEEIDKRIAELCEAF 130
Query: 121 EIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKE 180
++ Y+ + +G +S G KQK+ L+S + PKV+ LDE GLD KSARI + LL ++ +
Sbjct: 131 KVD-YLGKRVGEMSHGMKQKLMLVSVFMRKPKVIFLDEPTVGLDAKSARILKLLLRKYAD 189
Query: 181 EGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEIS--KEERLEDVFLKLTQA 238
EG +I +TH+L +AE +CDR+GII +GR+IAEGT+EEL++++ KE LED+FL+LT
Sbjct: 190 EGAAIFLTTHILEIAEKMCDRIGIINKGRLIAEGTMEELRKLAGQKEASLEDLFLQLTAE 249
Query: 239 KEEIAQVVSAL 249
EEI +++ L
Sbjct: 250 GEEIEEIIKEL 260
>gi|11498005 ABC transporter, ATP-binding protein [Archaeoglobus fulgidus]
>gi|7445610|pir||A69299 ABC transporter, ATP-binding
protein homolog - Archaeoglobus fulgidus
>gi|2650236|gb|AAB90840.1| (AE001077) ABC transporter,
ATP-binding protein [Archaeoglobus fulgidus]
Length = 241
Score = 194 bits (487), Expect = 1e-48
Identities = 107/249 (42%), Positives = 162/249 (64%), Gaps = 8/249 (3%)
Query: 1 MIIVENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIV 60
MI V NL R+G + + FTV+ GE+ +LGPNG+GKS+ M+ + GI+ DFEG++ +
Sbjct: 1 MIEVNNLTVRYGKTTAVSNVGFTVERGEVVAILGPNGAGKSSIMKSIVGIV-DFEGEIKI 59
Query: 61 GGVEVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAF 120
G+ + K + GYVPE L + LTP EFFSF+ VR + ++ + RV K V F
Sbjct: 60 DGMNA--NTKVAKNLFGYVPEEIRLIDHLTPEEFFSFLVSVRKLGEEAAK-RVEKYVRIF 116
Query: 121 EIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKE 180
+++ M++ I +LS G K+K++++++LLHDP L+LDE +NGLD SAR+ +E++ K
Sbjct: 117 RLEEQMDKPIISLSMGNKKKVAVVAALLHDPPYLLLDEPLNGLDAFSARVLKEVMAR-KT 175
Query: 181 EGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKEERLEDVFLKLTQAKE 240
E I+ STH++ +AE + DRV I+ +G IAEGT+EELK LE+ FLK+T E
Sbjct: 176 ESGGILLSTHIMEIAERLADRVIILNRGLKIAEGTLEELKSYG---TLEEAFLKITGQHE 232
Query: 241 EIAQVVSAL 249
+ +V+SAL
Sbjct: 233 SLEEVISAL 241
>pir||E72364 ABC transporter, ATP-binding protein - Thermotoga maritima (strain
MSB8) >gi|4981058|gb|AAD35629.1|AE001729_9 (AE001729)
ABC transporter, ATP-binding protein [Thermotoga
maritima]
Length = 244
Score = 190 bits (478), Expect = 1e-47
Identities = 92/239 (38%), Positives = 153/239 (63%)
Query: 2 IIVENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIVG 61
++V++LRKR G KE+LKGISF +++GEI+GL+GPNG+GK+TT+RI+S +I G V V
Sbjct: 4 VVVKDLRKRIGKKEILKGISFEIEEGEIFGLIGPNGAGKTTTLRIISTLIKPSSGIVTVF 63
Query: 62 GVEVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAFE 121
G V ++P +V++++ Y+PE Y ++ E+ FV G +EE V + E
Sbjct: 64 GKNVVEEPHEVRKLISYLPEEAGAYRNMQGIEYLRFVAGFYASSSSEIEEMVERATEIAG 123
Query: 122 IKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKEE 181
+ + + + T S G +K+ + +L+ +P++ ILDE +GLD +AR R++L + +E
Sbjct: 124 LGEKIKDRVSTYSKGMVRKLLIARALMVNPRLAILDEPTSGLDVLNAREVRKILKQASQE 183
Query: 182 GKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKEERLEDVFLKLTQAKE 240
G +I+ S+H + E +CDR+ +I+ G I+ GTVEELKE K + +E+VF ++ + E
Sbjct: 184 GLTILVSSHNMLEVEFLCDRIALIHNGTIVETGTVEELKERYKAQNIEEVFEEVVKCSE 242
>gb|AAK42722.1| ABC transporter, ATP binding protein [Sulfolobus solfataricus]
Length = 249
Score = 190 bits (477), Expect = 2e-47
Identities = 101/250 (40%), Positives = 162/250 (64%), Gaps = 9/250 (3%)
Query: 1 MIIVENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIV 60
++ V NL R+G + ++F+V + E+Y LLGPNG+GKS+T++ + ++ FEG + +
Sbjct: 9 LLNVRNLTVRYGSFIAVNSLNFSV-NSEVYCLLGPNGAGKSSTLKAIMDMVP-FEGNIEI 66
Query: 61 GGVEVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAF 120
G + VK VGYVPE PALYE +TP+E SFV +RGI D+ R+ LV+AF
Sbjct: 67 LGK--SNKEKFVKNYVGYVPEQPALYEYMTPSEIISFVASLRGI-NDL--NRINALVKAF 121
Query: 121 EIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKE 180
++ +MN I +LS G +QK+S++ SL+H+PK+LILDE N LD S ++ +EL+ +
Sbjct: 122 SLEMFMNTPIASLSMGNRQKVSILLSLIHEPKLLILDEPFNALDVLSVKVLKELIQSHVK 181
Query: 181 EGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKEERLEDVFLKLTQAKE 240
G ++FSTH++ +AE IC+R+GI+ +G ++ E + + ++E + LEDVFL +T E
Sbjct: 182 NGGGVLFSTHIMEVAEKICNRIGIMNKGIMVMETSSDNIREAGRS--LEDVFLSVTGLDE 239
Query: 241 EIAQVVSALK 250
I ++ L+
Sbjct: 240 TIKDILKGLE 249
>pir||C69049 ABC transporter (ATP-binding protein) - Methanobacterium
thermoautotrophicum (strain Delta H)
>gi|2622479|gb|AAB85847.1| (AE000900) ABC transporter
(ATP-binding protein) [Methanobacterium
thermoautotrophicum]
Length = 319
Score = 185 bits (464), Expect = 6e-46
Identities = 92/220 (41%), Positives = 140/220 (62%), Gaps = 1/220 (0%)
Query: 1 MIIVENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIV 60
MI VE++ K FG L +SF+V +GE+ G++G NG+GK+T +RI++GI+ G V V
Sbjct: 18 MIEVESVSKSFGRIRALDNLSFSVAEGELMGIIGHNGAGKTTAIRIIAGILHPDSGTVRV 77
Query: 61 GGVEVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAF 120
GG +V +DPL VK ++GY+PE P LYE + + G + G+P+D+L++R+ +L+E
Sbjct: 78 GGHDVTEDPLSVKSMIGYLPEEPNLYERFRAGDLLRYFGELYGVPRDVLDDRIAELLELV 137
Query: 121 EIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKE 180
+ I T S G +Q+I + +L+HDP ++I DE GLDP +A RE + + K
Sbjct: 138 GMTDRAMDPINTFSKGLRQRIGIARALIHDPPIIIFDEPTMGLDPATAFSIREFIRDLK- 196
Query: 181 EGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELK 220
K+++ TH + AE +CDRV II QGRI+ GT +ELK
Sbjct: 197 GSKTMILCTHYMEEAEYLCDRVAIINQGRILDIGTPDELK 236
>gb|AAG20087.1| (AE005088) ABC transport protein; Trp2 [Halobacterium sp. NRC-1]
Length = 249
Score = 179 bits (450), Expect = 2e-44
Identities = 93/233 (39%), Positives = 136/233 (57%), Gaps = 4/233 (1%)
Query: 7 LRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIVGGVEVA 66
L KR+G ++ I V G +YG LGPNG+GK+TTMR+L+ ++ G V GVEV
Sbjct: 11 LTKRYGDTTAIERIDLAVPSGSVYGFLGPNGAGKTTTMRMLTTLVEPTSGTATVAGVEVT 70
Query: 67 KDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAFEIKKYM 126
D V +GY+PE P L+ LT E ++ G+R IP E+R+ L+E F +
Sbjct: 71 -DRASVVPNIGYLPEEPPLHAELTAREQLRYIAGLRDIPDPRAEQRITDLLERFSLGDDA 129
Query: 127 NQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKEEGKSIV 186
++ I T S G KQK +I ++LHDP VL LDE +GLDP++AR R+ + + ++
Sbjct: 130 DRRISTYSKGMKQKTGIIQAMLHDPDVLFLDEPTSGLDPRAARTVRDTIADLTAGDATVF 189
Query: 187 FSTHVLALAELICDRVGIIYQGRIIAEGTVEELK---EISKEERLEDVFLKLT 236
STH+L + + + D VG++Y G ++ EG + LK E E LEDVFL +T
Sbjct: 190 LSTHILPVVDDLADTVGVLYDGSLVTEGPPDALKQRAEAGDERTLEDVFLTVT 242
>pir||G69803 ABC transporter (ATP-binding protein) homolog yfiL - Bacillus
subtilis >gi|1817536|dbj|BAA11402.1| (D78508) YfiL
[Bacillus subtilis] >gi|2633155|emb|CAB12660.1| (Z99108)
similar to ABC transporter (ATP-binding protein)
[Bacillus subtilis]
Length = 311
Score = 175 bits (438), Expect = 6e-43
Identities = 84/219 (38%), Positives = 141/219 (64%)
Query: 1 MIIVENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIV 60
M+ EN++K +G K ++KGISF++K GE +GLLGPNG+GKSTT+ ++SG++ G + V
Sbjct: 1 MLQAENIKKAYGKKTIVKGISFSLKKGESFGLLGPNGAGKSTTISMISGLVPHDSGNITV 60
Query: 61 GGVEVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAF 120
GG + K+ + K+ +G VP+ ALY +LT E F G + G+ D ++R +++E
Sbjct: 61 GGYVIGKETAKAKQKIGIVPQEIALYPTLTAHENLMFWGKMYGLTHDEAKKRAAEVLEYV 120
Query: 121 EIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKE 180
+ + I T S G K++I++ ++L+H P++LI+DE G+DP+S E + + E
Sbjct: 121 GLTERAKDKIETFSGGMKRRINIGAALMHKPELLIMDEPTVGIDPQSRNHILETVKQLNE 180
Query: 181 EGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEEL 219
G ++++++H + E +CDR+GII QG +IA GT +L
Sbjct: 181 TGMTVIYTSHYMEEVEFLCDRIGIIDQGEMIAIGTKTDL 219
>pir||S76626 ABC-type transport protein sll0489 - Synechocystis sp. (strain PCC
6803) >gi|1001733|dbj|BAA10570.1| (D64004) ABC
transporter [Synechocystis sp.]
Length = 342
Score = 173 bits (435), Expect = 1e-42
Identities = 91/219 (41%), Positives = 133/219 (60%), Gaps = 1/219 (0%)
Query: 1 MIIVENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIV 60
MI VE+L K +G ++ + F+V+ GEI G LGPNG+GK+TTMRIL+G I G V V
Sbjct: 1 MIEVEHLSKVYGSTTAIQNVDFSVQKGEILGFLGPNGAGKTTTMRILAGYIPATTGTVRV 60
Query: 61 GGVEVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAF 120
G +V + L V++ +GY+PE P LY +T A F +FV ++G+ +RV +E
Sbjct: 61 AGFDVHEQSLAVRKRIGYLPENPPLYGDMTVASFLNFVASIKGVKPGDRRQRVIWAMERC 120
Query: 121 EIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKE 180
++ + LI LS G KQ++ + +++HDP V+ILDE GLDPK R L+ E
Sbjct: 121 QLTEKRKVLIRKLSKGFKQRVGIAQAIVHDPAVIILDEPTVGLDPKQIIEVRNLIKSLAE 180
Query: 181 EGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEEL 219
+ +I+ STH+L + CDRV II QGR++A T + L
Sbjct: 181 D-HTIILSTHILPEVSMTCDRVTIINQGRVVATNTPDNL 218
>gb|AAG20956.1| (AE005162) daunorubicin resistance ABC transporter ATP-binding
protein; Trp6 [Halobacterium sp. NRC-1]
Length = 263
Score = 173 bits (435), Expect = 1e-42
Identities = 88/238 (36%), Positives = 140/238 (57%), Gaps = 4/238 (1%)
Query: 2 IIVENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIVG 61
I ++L K +G + G + ++ G +YG LGPNG+GK+TT+R+L+ + G V
Sbjct: 7 ITTDDLTKEYGDTTAVSGFTLAIEAGHVYGFLGPNGAGKTTTIRMLTALTEPTSGAGHVA 66
Query: 62 GVEVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAFE 121
G + + I GY+PE P +Y+ LT E + GG+R + +E+R+ +L++ F+
Sbjct: 67 GHPITNRQAIIPHI-GYLPELPPIYDELTAREQLEYHGGLRDMDPVEIEDRIEELLDRFD 125
Query: 122 IKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKEE 181
+ + I T S G KQK L+ +L+H+P V+ILDE +GLDP++AR R+ + E
Sbjct: 126 LTGDADDRISTYSKGMKQKTGLVQALMHEPDVVILDEPTSGLDPRAARTVRDTITELAAG 185
Query: 182 GKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELK---EISKEERLEDVFLKLT 236
+++ STH+L + + VGI+Y G ++AEG EELK E E LEDVFL++T
Sbjct: 186 DRTVFLSTHILPVVAELATEVGILYDGELVAEGAPEELKDRMEAGGESTLEDVFLEVT 243
>emb|CAB95908.1| (AL359988) putative ABC transport system ATP-binding protein
[Streptomyces coelicolor A3(2)]
Length = 263
Score = 172 bits (432), Expect = 3e-42
Identities = 87/235 (37%), Positives = 148/235 (62%), Gaps = 2/235 (0%)
Query: 4 VENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIVGGV 63
V+ L KRFG + + G+ + G+ GL+GPNG+GK+TT+ +++G++ +G V V G
Sbjct: 14 VQGLWKRFGQQVAVGGVDLELPAGKFIGLVGPNGAGKTTTLSMVTGLLRPDQGTVEVVGH 73
Query: 64 EVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAFEIK 123
+V +DP++VK +G +PE L+E L+ E + G +RG+P D +++R +L++ ++
Sbjct: 74 DVWRDPVEVKARIGVLPEGLRLFERLSGRELLGYTGRLRGLPGDEVDKRATQLLDVLDLA 133
Query: 124 KYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKEEGK 183
++L+ S G ++KI L ++LLH+P+VL LDE G+DP SA+ R +L + G
Sbjct: 134 GAQHKLVVDYSTGMRKKIGLAAALLHNPEVLFLDEPFEGVDPVSAQTIRGVLERYTASGA 193
Query: 184 SIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKEERLEDVFLKLTQA 238
++VFS+HV+ L E +CD V ++ GRI A GT+ E++ L++ FL+L A
Sbjct: 194 TVVFSSHVMELVESLCDWVAVMAAGRIRATGTLAEVR--GGAASLQEAFLELVGA 246
>sp|Q58429|YA23_METJA HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PROTEIN MJ1023
>gi|2127730|pir||F64427 ABC transporter ATP-binding
protein - Methanococcus jannaschii
>gi|1499865|gb|AAB99027.1| (U67545) ABC transporter
ATP-binding protein [Methanococcus jannaschii]
Length = 262
Score = 172 bits (431), Expect = 4e-42
Identities = 97/254 (38%), Positives = 145/254 (56%), Gaps = 25/254 (9%)
Query: 2 IIVENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIVG 61
I VENL K FG K+VL ISF V +GEI+GLLG NG+GK+TT+RIL+GII ++ G V V
Sbjct: 5 IKVENLTKYFGDKKVLDEISFEVYEGEIFGLLGHNGAGKTTTLRILAGIIEEYTGYVEVN 64
Query: 62 GVEVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAFE 121
G +GY+PE LY + F G + G+ K+ + + + + +
Sbjct: 65 GK------------IGYLPEERGLYRDEKVVDVLKFFGELAGMKKEEIAKSIDYWLNKLK 112
Query: 122 IKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKEE 181
I Y I LS G +QK+ I S++H+P ++ILDE +GLD + R+ R++++E KEE
Sbjct: 113 ISNYKYSKIKELSKGNQQKVQFIVSVIHNPDIVILDEPFSGLDVVNVRLLRDIIFELKEE 172
Query: 182 GKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEEL-------------KEISKEERL 228
GK+I+ STH L E +CDRV I+ +G+ + G +E++ K I KE
Sbjct: 173 GKTIILSTHQLEKIERLCDRVLILKKGKAVHYGKIEDICRKMAYIEYLDNGKLIKKEIPY 232
Query: 229 EDVFLKLTQAKEEI 242
E+ L L + E++
Sbjct: 233 EEAVLILKEKAEDV 246
>pir||E75108 daunorubicin resistance ATP-binding protein (drra-1) PAB1923 -
Pyrococcus abyssi (strain Orsay)
>gi|5458093|emb|CAB49582.1| (AJ248285) daunorubicin
resistance ATP-binding protein (drrA-1) [Pyrococcus
abyssi]
Length = 328
Score = 170 bits (427), Expect = 1e-41
Identities = 92/242 (38%), Positives = 151/242 (62%), Gaps = 4/242 (1%)
Query: 2 IIVENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIVG 61
I VENL K++G +KGISF VK GEI+ LGPNG+GK+TT+ +L+ ++ GK IV
Sbjct: 4 IEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAIVA 63
Query: 62 GVEVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAFE 121
G +V K+P +V++ +G V + P+L LT E G + G+ L+E++ +L++ E
Sbjct: 64 GHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKFVE 123
Query: 122 IKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKEE 181
+ ++ ++ + S G ++++ + +L+H+P++L LDE GLDP++ E + KEE
Sbjct: 124 LWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMKEE 183
Query: 182 GKSIVF-STHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKEERLEDVFLKLTQAKE 240
+ +F +TH + AE + DR+ II G+IIAEGT EELK++ + ++LKL KE
Sbjct: 184 HEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVGN---DIIYLKLESPKE 240
Query: 241 EI 242
E+
Sbjct: 241 EL 242
>pir||E75122 hypothetical protein PAB1845 - Pyrococcus abyssi (strain Orsay)
>gi|5458205|emb|CAB49694.1| (AJ248285) hypothetical
protein [Pyrococcus abyssi]
Length = 305
Score = 170 bits (426), Expect = 2e-41
Identities = 86/242 (35%), Positives = 150/242 (61%)
Query: 1 MIIVENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIV 60
+I +ENL K +G + + +S V+ G I+G LGPNG+GK+TT+ + GII G V +
Sbjct: 3 VIEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSVRL 62
Query: 61 GGVEVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAF 120
G ++ K+P++ K +G++PE +YE LT F IPK E+R+ +L++
Sbjct: 63 LGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLKLV 122
Query: 121 EIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKE 180
+ + + + S G KQ++ L +L++DP++LILDE +GLDP+ AR+ ++++ E K+
Sbjct: 123 GLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQKK 182
Query: 181 EGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKEERLEDVFLKLTQAKE 240
+GK++ FS+H+L+ E + D+VGII +G++ GT+EE+K+ E ++ ++ Q
Sbjct: 183 QGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYEIKVETKQPFP 242
Query: 241 EI 242
EI
Sbjct: 243 EI 244
>gi|11499468 daunorubicin resistance ATP-binding protein (drrA) [Archaeoglobus
fulgidus] >gi|7445660|pir||C69485 daunorubicin
resistance ATP-binding protein (drrA) homolog -
Archaeoglobus fulgidus >gi|2648659|gb|AAB89368.1|
(AE000972) daunorubicin resistance ATP-binding protein
(drrA) [Archaeoglobus fulgidus]
Length = 398
Score = 169 bits (425), Expect = 2e-41
Identities = 95/240 (39%), Positives = 147/240 (60%), Gaps = 4/240 (1%)
Query: 2 IIVENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIVG 61
I VENL K+FG E ++G+SF VK GEI+ LGPNG+GK+TT+ IL+ ++ GK V
Sbjct: 80 IEVENLVKKFGDFEAVRGVSFKVKRGEIFAFLGPNGAGKTTTVHILTTLLKPTSGKAFVA 139
Query: 62 GVEVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAFE 121
G++V ++ +V+R +G V + P++ LT E GGV G+ L+E++ +L++ E
Sbjct: 140 GLDVVREAREVRRRIGIVFQDPSVDRDLTAYENMLVHGGVYGLKGKELKEKIERLLKFVE 199
Query: 122 IKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKEE 181
+ ++ ++L+ S G ++++ + SLLH P+VL LDE GLDP++ + KEE
Sbjct: 200 LWEFRDKLVKYFSGGMQRRLEIARSLLHHPEVLFLDEPTIGLDPQTRAHVWSYIEAMKEE 259
Query: 182 GKSIVF-STHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKEERLEDVFLKLTQAKE 240
+F +TH + AE + DRV II GRIIAEG+VEELK + + V+LK+ E
Sbjct: 260 QDMTIFLTTHYMEEAEKLADRVAIIDHGRIIAEGSVEELKRLVGS---DVVYLKVENGAE 316
>gi|11498736 ABC transporter, ATP-binding protein [Archaeoglobus fulgidus]
>gi|7445762|pir||G69391 ABC transporter, ATP-binding
protein homolog - Archaeoglobus fulgidus
>gi|2649451|gb|AAB90107.1| (AE001025) ABC transporter,
ATP-binding protein [Archaeoglobus fulgidus]
Length = 294
Score = 167 bits (419), Expect = 1e-40
Identities = 86/218 (39%), Positives = 132/218 (60%), Gaps = 4/218 (1%)
Query: 2 IIVENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIVG 61
I VENL K F G L GIS V+ GEI+G LGPNG+GK+TT+ G+I G V +
Sbjct: 4 IEVENLTKVFNGFRALDGISLVVERGEIFGFLGPNGAGKTTTINCCLGLIKPTSGSVRIA 63
Query: 62 GVEVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAFE 121
G++V + P++VK I GY+PE Y +LT + + PKD ++E L+
Sbjct: 64 GMDVEEKPVEVKEICGYLPENYGFYPNLTARQNLLYFSEFYANPKDNVDE----LLALVG 119
Query: 122 IKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKEE 181
++ ++ +G S G KQ+++L +L++DP+V+ LDE NGLDP+ FR+++ E ++
Sbjct: 120 LQDSADKKVGEFSRGMKQRLALAQALINDPEVVFLDEPTNGLDPQGIADFRKIIRELNQK 179
Query: 182 GKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEEL 219
GK+ FS+H+L+ +C VGII +GRI+ G + EL
Sbjct: 180 GKTFFFSSHILSEVREVCSVVGIINRGRIVKVGKISEL 217
>pir||A75184 ATP-binding transport protein PAB0434 - Pyrococcus abyssi (strain
Orsay) >gi|5458062|emb|CAB49552.1| (AJ248284)
ATP-BINDING TRANSPORT PROTEIN [Pyrococcus abyssi]
Length = 244
Score = 167 bits (419), Expect = 1e-40
Identities = 84/233 (36%), Positives = 143/233 (61%)
Query: 2 IIVENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIVG 61
+ V NL K +G + L+G+SF +++GEI+GL+GPNG+GKSTT++IL+ ++ G+ V
Sbjct: 7 VAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEVF 66
Query: 62 GVEVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAFE 121
G +V K+ +V++++ Y+PE Y+ LT E+ F+ + E+ ++ +E
Sbjct: 67 GHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIELSG 126
Query: 122 IKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKEE 181
+ + +N + T S G +++ L +L+ PK+ ILDE +GLD +A R + EF +E
Sbjct: 127 LGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFSKE 186
Query: 182 GKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKEERLEDVFLK 234
G + + S+H + E +CDRV +I++GRI+ GT ELKE E LE+VF++
Sbjct: 187 GVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERYNAENLEEVFME 239
>pir||G71131 probable ATP-binding protein - Pyrococcus horikoshii
>gi|3257230|dbj|BAA29913.1| (AP000003) 312aa long
hypothetical ATP-binding protein [Pyrococcus horikoshii]
Length = 312
Score = 165 bits (413), Expect = 5e-40
Identities = 85/237 (35%), Positives = 153/237 (63%), Gaps = 4/237 (1%)
Query: 2 IIVE--NLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVI 59
+++E NL K +G ++G++F+V +GE++G LGPNG+GK+TT+R+L+G++ G+V
Sbjct: 6 VVIEAINLTKYYGNFPAVRGVTFSVNEGEVFGFLGPNGAGKTTTIRMLTGVLKPTSGQVR 65
Query: 60 VGGVEVAKDP--LQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLV 117
V G ++ ++P L+ ++ +G VPE Y LT + +G + G+PK +E+R +L+
Sbjct: 66 VLGYDMTREPEKLKARQRMGIVPEMANPYIDLTAMQNLKLMGELYGLPKWEIEKRSIELL 125
Query: 118 EAFEIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYE 177
+ FE+ + N + S G +Q++ L +++ DP++ LDE +GLD SARI ++++ +
Sbjct: 126 KLFELYEKRNIKVRGFSKGMRQRLVLAMAMIADPELYFLDEPTSGLDVISARIIKDIIRD 185
Query: 178 FKEEGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKEERLEDVFLK 234
K+ GK+I +TH + A +C+R+GII +G+++A T E LK ++KE +V LK
Sbjct: 186 EKKAGKTIFLTTHNMNDANELCERIGIIRKGKLVAIDTPEGLKRLTKEHLSVEVSLK 242
>pir||A70194 ABC transporter, ATP-binding protein homolog - Lyme disease
spirochete >gi|2688689|gb|AAC67099.1| (AE001175) ABC
transporter, ATP-binding protein [Borrelia burgdorferi]
Length = 309
Score = 165 bits (413), Expect = 5e-40
Identities = 87/243 (35%), Positives = 153/243 (62%), Gaps = 4/243 (1%)
Query: 1 MIIVENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIV 60
MI VE + K +G L +SF V++GE+ G+LGPNG+GKST ++IL+ +G V +
Sbjct: 1 MINVEKVTKMYGPFTALFNVSFKVEEGEVLGILGPNGAGKSTLIKILTSFHYPSKGNVKI 60
Query: 61 GGVEVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAF 120
G ++ + ++ + +GYVPE ALY L+ E+ F+ ++G+ K L++ + +++ F
Sbjct: 61 FGKDIVEHSKEILQQIGYVPEKLALYPELSVKEYLKFISEIKGVKK--LKKEIDRVISIF 118
Query: 121 EIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKE 180
++K+ ++LI LS G +Q++ + +L+++PK++ILDE NGLDP F+E L E +
Sbjct: 119 KLKEVEDKLISQLSKGFRQRVGIAGALINNPKLVILDEPTNGLDPNQIIEFKEFLRELAK 178
Query: 181 EGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEE-LKEISKEERLEDVFLKLTQAK 239
E +I+FS+H+L+ E IC R+ I+ G I+A+ T E +K KE +E + K ++ +
Sbjct: 179 E-STILFSSHILSEVESICKRIIIVNNGVIVADDTKENIIKNKLKEIEIELIVSKKSENE 237
Query: 240 EEI 242
++I
Sbjct: 238 KKI 240
>pir||H71008 probable ATP-binding transport protein - Pyrococcus horikoshii
>gi|3257789|dbj|BAA30472.1| (AP000006) 308aa long
hypothetical ATP-binding transport protein [Pyrococcus
horikoshii]
Length = 308
Score = 164 bits (411), Expect = 9e-40
Identities = 83/241 (34%), Positives = 147/241 (60%)
Query: 2 IIVENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIVG 61
I VE L K +G + + +SF V +G ++G LGPNG+GK+TT+ + GII G V +
Sbjct: 4 IEVEKLTKSYGKFKAIDNLSFVVDEGIVFGFLGPNGAGKTTTILSMLGIIIPDSGDVRIL 63
Query: 62 GVEVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAFE 121
G ++ K+PL+ K +G++PE +YE LT F + K E+R+ +L++
Sbjct: 64 GYDIFKEPLKAKERLGFLPENATIYEELTAWRNLDFFASFYRMSKQEKEKRIEELLKLVG 123
Query: 122 IKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKEE 181
+ + T S G +Q++ L +L++DP++LILDE +GLDP+ AR+ ++++ E +++
Sbjct: 124 LWDVRYRKAKTFSKGMRQRLLLAQALINDPELLILDEPTSGLDPEGARLVKDIIREQRKQ 183
Query: 182 GKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKEERLEDVFLKLTQAKEE 241
GK++ FS+H+L+ E + D+VGII +G++ GT+EE+K+ E ++ ++ Q E
Sbjct: 184 GKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYEIKIETKQPLPE 243
Query: 242 I 242
+
Sbjct: 244 L 244
>pir||D72257 hypothetical protein TM1403 - Thermotoga maritima (strain MSB8)
>gi|4981967|gb|AAD36474.1|AE001793_4 (AE001793)
antibiotic ABC transporter, ATP-binding protein,
putative [Thermotoga maritima]
Length = 327
Score = 163 bits (409), Expect = 2e-39
Identities = 91/241 (37%), Positives = 149/241 (61%), Gaps = 4/241 (1%)
Query: 1 MIIVENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIV 60
+I+VENL K+FG E +KG+SF+VK GEI+ LGPNG+GK+TT+ +L+ ++ GK V
Sbjct: 4 IIVVENLVKKFGDFEAVKGVSFSVKKGEIFAFLGPNGAGKTTTIHMLTTLLKPTSGKAWV 63
Query: 61 GGVEVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAF 120
G +V K+P +V+R +G V + +L LT E G + G + L++R+ +L+E
Sbjct: 64 AGHDVLKEPREVRRKIGIVFQDQSLDRELTAYENMYIHGKIYGYGGEKLKKRILELLEFV 123
Query: 121 EIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKE 180
E+ ++ ++ + T S G +++ + SL+H+P+VL LDE GLDP + E + + K+
Sbjct: 124 ELLEFKDKPVKTFSGGMARRLEIARSLIHEPEVLFLDEPTIGLDPHTRAHMWEYISKMKK 183
Query: 181 EGKSIVF-STHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKEERLEDVFLKLTQAK 239
E +F +TH + AE + DRV II G+IIA GT ELK + + E ++++ ++A
Sbjct: 184 EHNMTIFLTTHYMDEAEQLADRVAIIDHGKIIALGTPTELKRMVGK---EIIYVRFSEAV 240
Query: 240 E 240
E
Sbjct: 241 E 241
>pir||B69065 ABC transporter (ATP-binding, daunorubicin resistance) -
Methanobacterium thermoautotrophicum (strain Delta H)
>gi|2622603|gb|AAB85962.1| (AE000909) ABC transporter
(ATP-binding [Methanobacterium thermoautotrophicum]
Length = 350
Score = 163 bits (409), Expect = 2e-39
Identities = 83/225 (36%), Positives = 138/225 (60%), Gaps = 2/225 (0%)
Query: 6 NLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIVGGVEV 65
+L K +G + + ++ ++ I+G LGPNG+GK+TT+++L+ +I G V G ++
Sbjct: 9 DLTKVYGDFKAVDSLNMKIEKNSIFGFLGPNGAGKTTTIKMLTCLIPPSSGTARVAGYDI 68
Query: 66 AKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAFEIKKY 125
K+P +V++ +G VP+ +LYE LT E G+P+D+ E R+ +L+E +IK
Sbjct: 69 LKNPDEVRQQIGMVPQKVSLYEDLTARENVEMCADFYGMPEDLKESRIEELMELVDIKYA 128
Query: 126 MNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKEEGKSI 185
++ +G +S G +QK+SL++SL+H P +L LDE GLDP + R+ +L+ E G +I
Sbjct: 129 ADKPVGQMSGGQQQKVSLVASLIHQPDILFLDEPTIGLDPTTKRVLWDLIDELNSSGHTI 188
Query: 186 VFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKE--ISKEERL 228
+ +H + EL+CD VGII QG + A T + LK+ I +EE L
Sbjct: 189 ILCSHDMYEVELLCDYVGIINQGVLAAFDTPQGLKDTVIKEEESL 233
>pir||F82572 sodium ABC transporter ATP-binding protein XF2329 [imported] -
Xylella fastidiosa (strain 9a5c)
>gi|9107498|gb|AAF85128.1|AE004043_12 (AE004043) sodium
ABC transporter ATP-binding protein [Xylella fastidiosa]
Length = 248
Score = 163 bits (408), Expect = 2e-39
Identities = 82/244 (33%), Positives = 144/244 (58%), Gaps = 4/244 (1%)
Query: 1 MIIVENLRKRFGGKEVL----KGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEG 56
MI E+L K F K+ L K +SF DG I GLLGPNG+GK+TT+R+L ++ +G
Sbjct: 1 MITAEHLHKSFKTKKGLVNAVKDLSFHAADGRITGLLGPNGAGKTTTLRMLYTLLIPDQG 60
Query: 57 KVIVGGVEVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKL 116
+ + GV+ DP+ V+R +G +P+ +Y+ LT E ++ G + G+ + + R+ L
Sbjct: 61 CISIDGVDAVSDPMTVRRGLGVLPDACGIYKRLTARENIAYFGELHGLSRIDIAARLSIL 120
Query: 117 VEAFEIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLY 176
+A ++ +++ S G + KI++ +L+HDP+ +ILDE NGLD + R R+ L
Sbjct: 121 SKALDMDDILDRQAAGFSHGQRTKIAIARALVHDPRNIILDEPTNGLDVMTTRKLRDFLR 180
Query: 177 EFKEEGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKEERLEDVFLKLT 236
+ + EG+ I+FS+H++ +CD + +I G ++ G+ +EL+ + ++ LED F+
Sbjct: 181 QLRAEGRCIIFSSHIMQEVAALCDHIIVIANGTVVVAGSGDELRARTGKDNLEDAFIDAV 240
Query: 237 QAKE 240
+ E
Sbjct: 241 GSDE 244
>pir||D72492 probable ABC transporter ATP-binding protein APE2579 - Aeropyrum
pernix (strain K1) >gi|5106285|dbj|BAA81596.1|
(AP000064) 333aa long hypothetical ABC transporter
ATP-binding protein [Aeropyrum pernix]
Length = 333
Score = 163 bits (408), Expect = 2e-39
Identities = 88/253 (34%), Positives = 148/253 (57%), Gaps = 4/253 (1%)
Query: 1 MIIVENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIV 60
M++ E L K +GG + G+SF + GE++ LLGPNG+GK+TT+++LS ++ G+ +
Sbjct: 9 MVVAEELVKDYGGFRAVDGVSFRIARGELFSLLGPNGAGKTTTIKMLSTLLRPTSGEAWI 68
Query: 61 GGVEVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAF 120
G + ++P V+R++G VP+ + ++ + + G+P ER R++++
Sbjct: 69 AGYSIVREPGNVRRVIGLVPQDLTADDEMSGWDNVYIQARLYGLPSSEARERTREVLDYL 128
Query: 121 EIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKE 180
++ + ++ + T S G ++K+ + SL+H PKVL LDE GLD S R + + K
Sbjct: 129 DLMEAAHRRVATYSGGMRRKLEIAMSLVHSPKVLFLDEPTLGLDVHSRRSLWRYIEDLKR 188
Query: 181 EGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKEERLEDVFLKLTQAKE 240
+I+ +TH + AE++ DRV II +GRI+AEGT EELK K E V+++L + E
Sbjct: 189 SAVTILLTTHYMEEAEMLSDRVAIIDRGRIVAEGTPEELKARVKG---ETVYIEL-KDPE 244
Query: 241 EIAQVVSALKEAL 253
+V ALKE L
Sbjct: 245 YTEPLVLALKEKL 257
>pir||A83142 probable ATP-binding component of ABC transporter PA4037 [imported]
- Pseudomonas aeruginosa (strain PAO1)
>gi|9950232|gb|AAG07424.1|AE004820_9 (AE004820) probable
ATP-binding component of ABC transporter [Pseudomonas
aeruginosa]
Length = 308
Score = 163 bits (408), Expect = 2e-39
Identities = 82/224 (36%), Positives = 131/224 (57%), Gaps = 1/224 (0%)
Query: 1 MIIVENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIV 60
MI ++ L KRF G+ V+ +SF + GEI GLLGPNG+GKSTT+++LSG + G V +
Sbjct: 1 MIDIDRLSKRFSGRTVVNDLSFRIDRGEIVGLLGPNGAGKSTTLKMLSGFLAPSAGSVRI 60
Query: 61 GGVEVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAF 120
G ++ Q ++++GY+PE Y +T F +FV +R R+ ++
Sbjct: 61 FGFDMQDKARQAQKLIGYLPENAPSYGEMTVEGFLAFVASIRDYSGREKRRRIDSAMDCM 120
Query: 121 EIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKE 180
E++ +I TLS G K++++L ++LHDP++L+LDE +GLDP R+L+
Sbjct: 121 ELRDERRSIIETLSKGFKRRVALAQAILHDPELLLLDEPTDGLDPNQKHQVRQLVKNL-S 179
Query: 181 EGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISK 224
E K +V STH+L +C R +I GR++A+ T EL+ S+
Sbjct: 180 ESKIVVISTHILEEVSFMCSRALVINGGRLLADNTPGELRTRSR 223
>sp|P55339|ECSA_BACSU ABC-TYPE TRANSPORTER ATP-BINDING PROTEIN ECSA
>gi|7445744|pir||F69619 ABC transporter (ATP-binding
protein) ecsA - Bacillus subtilis
>gi|1177253|emb|CAA61074.1| (X87807) putative
ATP-binding protein of ABC-type [Bacillus subtilis]
>gi|2226115|emb|CAA74409.1| (Y14077) Hypothetical
protein [Bacillus subtilis] >gi|2633340|emb|CAB12844.1|
(Z99109) ABC transporter (ATP-binding protein) [Bacillus
subtilis]
Length = 247
Score = 162 bits (407), Expect = 3e-39
Identities = 86/239 (35%), Positives = 141/239 (58%), Gaps = 2/239 (0%)
Query: 1 MIIVENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIV 60
++ V++L + VLK +SFT++ +I GL+G NG+GKSTT+R + G++ +G + +
Sbjct: 3 LLSVKDLTGGYTRNPVLKNVSFTLEPNQIVGLIGLNGAGKSTTIRHIIGLMDPHKGSIEL 62
Query: 61 GGVEVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAF 120
G A+DP + Y+PETP LYE LT E G+ K+ +E+R+ L++ F
Sbjct: 63 NGKTFAEDPEGYRSQFTYIPETPVLYEELTLMEHLELTAMAYGLSKETMEKRLPPLLKEF 122
Query: 121 EIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKE 180
++K + S G KQK+ ++ + L +P + I+DE GLDP + E + E K+
Sbjct: 123 RMEKRLKWFPAHFSKGMKQKVMIMCAFLAEPALYIIDEPFLGLDPLAINALLERMNEAKK 182
Query: 181 EGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEI--SKEERLEDVFLKLTQ 237
G S++ STH+LA AE CD I++ G + A GT+ EL+E K+ L+D++L+LT+
Sbjct: 183 GGASVLMSTHILATAERYCDSFIILHNGEVRARGTLSELREQFGMKDAALDDLYLELTK 241
>sp|P46903|NATA_BACSU ATP-BINDING TRANSPORT PROTEIN NATA (NA+ ABC TRANSPORTER)
>gi|7445612|pir||A69666 Na+ ABC transporter (extrusion)
(ATP-binding protein) natA - Bacillus subtilis
>gi|973330|gb|AAB53022.1| (U30873) NatA [Bacillus
subtilis] >gi|2415726|dbj|BAA22236.1| (AB000617) NatA
[Bacillus subtilis] >gi|2632561|emb|CAB12069.1| (Z99105)
Na+ ABC transporter (ATP-binding protein) [Bacillus
subtilis]
Length = 246
Score = 162 bits (407), Expect = 3e-39
Identities = 79/239 (33%), Positives = 145/239 (60%), Gaps = 7/239 (2%)
Query: 1 MIIVENLRKRFGGKE----VLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEG 56
MI + + +RF K+ ++ +S T++ GE+ G+LG NG+GK+T +R+++ ++ +G
Sbjct: 1 MITLTDCSRRFQDKKKVVKAVRDVSLTIEKGEVVGILGENGAGKTTMLRMIASLLEPSQG 60
Query: 57 KVIVGGVEVAKDPLQVKRIVGYV--PETPALYESLTPAEFFSFVGGVRGIPKDILEERVR 114
+ V G + K P +VK+ +G + ET LY+ +T E + G + G+ + ++ R+
Sbjct: 61 VITVDGFDTVKQPAEVKQRIGVLFGGET-GLYDRMTAKENLQYFGRLYGLNRHEIKARIE 119
Query: 115 KLVEAFEIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFREL 174
L + F ++ YMN+ +G S G +QK+++ +L+HDP +++ DE GLD S+ IFRE
Sbjct: 120 DLSKRFGMRDYMNRRVGGFSKGMRQKVAIARALIHDPDIILFDEPTTGLDITSSNIFREF 179
Query: 175 LYEFKEEGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKEERLEDVFL 233
+ + K E K+I+FS+H++ + +CD V +I+ G +I G +E L E + E L +F+
Sbjct: 180 IQQLKREQKTILFSSHIMEEVQALCDSVIMIHSGEVIYRGALESLYESERSEDLNYIFM 238
>emb|CAC11378.1| (AL445063) gliding motility protein related [Thermoplasma
acidophilum]
Length = 239
Score = 162 bits (406), Expect = 3e-39
Identities = 88/224 (39%), Positives = 140/224 (62%), Gaps = 9/224 (4%)
Query: 6 NLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIVGGVEV 65
++ K FG K+ L G+SF V+ E L+GPNG+GKSTT++IL+G+I G V VGG +
Sbjct: 11 DVTKSFGTKKALDGLSFDVECQESVALIGPNGAGKSTTLKILAGLIKPDSGSVKVGGFD- 69
Query: 66 AKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAFEIKKY 125
D ++ KR++GY+PE + Y +L+ E ++G +R + LE++V L+ E+ +Y
Sbjct: 70 -PDSIEAKRLMGYLPEDASPYLTLSVKENLEYIGALR--KTEDLEQKVEFLLNLMELNEY 126
Query: 126 MNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLD-PKSARIFRELLYEFKEEGKS 184
N + TLS G +QK+S+ +++HDPK+++LDE +N LD P +I + F +
Sbjct: 127 RNSRVSTLSRGNRQKLSIALAIIHDPKIMLLDEPLNYLDIPTQEKIIK----YFNSMNAT 182
Query: 185 IVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKEERL 228
+ STH++++AE R II GR I G ++ELKE+S+EE L
Sbjct: 183 FLVSTHIMSIAERFTRRAIIINSGRQIWTGQIDELKEMSREENL 226
>pir||H75157 daunorubicin resistance ATP-binding protein (drra-2) PAB2068 -
Pyrococcus abyssi (strain Orsay)
>gi|5457853|emb|CAB49343.1| (AJ248284) daunorubicin
resistance ATP-binding protein (drrA-2) [Pyrococcus
abyssi]
Length = 318
Score = 162 bits (405), Expect = 5e-39
Identities = 98/267 (36%), Positives = 157/267 (58%), Gaps = 22/267 (8%)
Query: 2 IIVENLRKRFGGK-----------EVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGI 50
I V+NLRK + K E LKGI+F VK GE++GLLGPNG+GK+TT++IL+ +
Sbjct: 4 IEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKILTTL 63
Query: 51 ITDFEGKVIVGGVEVAKDPLQVKRIVGYVPETP-ALYESLTPAEFFSFVGGVRGIPKDIL 109
+ G+ V G ++ K+ ++++ + V E LY LT E + + +PK +
Sbjct: 64 LEPTSGEARVLGFDIVKEAREIRKRINLVAEGERTLYWRLTAYENLRYFASIYYVPKKVA 123
Query: 110 EERVRKLVEAFEIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSAR 169
EER+R L+ + + L+ S G KQ++++ +L++DP+VL LDE GLD +SA
Sbjct: 124 EERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQSAI 183
Query: 170 IFRELLYEF-KEEGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKEERL 228
REL+ + +EE K+++ +TH + AE +CDR+ II GRIIA T E LK++ +++ +
Sbjct: 184 FVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRIIALDTPEGLKKLVRKDTI 243
Query: 229 EDVFLK---------LTQAKEEIAQVV 246
+V +K L + KEE +VV
Sbjct: 244 VEVRVKNYNGENPFGLAKIKEEGEKVV 270
>pir||C83188 probable ATP-binding component of ABC transporter PA3672 [imported]
- Pseudomonas aeruginosa (strain PAO1)
>gi|9949834|gb|AAG07060.1|AE004786_12 (AE004786)
probable ATP-binding component of ABC transporter
[Pseudomonas aeruginosa]
Length = 307
Score = 161 bits (403), Expect = 8e-39
Identities = 82/224 (36%), Positives = 128/224 (56%), Gaps = 1/224 (0%)
Query: 1 MIIVENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIV 60
MI NL KRFG + + +SF V+ GE+ G LGPNG+GKSTTM++L+G + G +
Sbjct: 1 MIETRNLGKRFGSRVAVDDLSFQVETGEVLGFLGPNGAGKSTTMKMLTGFLAPCAGTASI 60
Query: 61 GGVEVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAF 120
G ++ LQ +R++GY+PE Y +T F F+ +RG ERV + +
Sbjct: 61 FGFDIRNRTLQAQRLIGYLPEGSPCYAEMTVQGFLDFIAEIRGYRGAGKRERVARALGLL 120
Query: 121 EIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKE 180
E+ + Q I TLS G ++++ L ++LH+P+ L+LDE +GLDP REL+ +
Sbjct: 121 ELDEVRRQTIETLSKGFRRRVGLAQAILHEPRALVLDEPTDGLDPNQKHQVRELIRGLAQ 180
Query: 181 EGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISK 224
E + ++ STH+L +C R +I GR++A+ T EL S+
Sbjct: 181 E-RIVIISTHILEEVSALCSRALVIGGGRLLADSTPLELASRSR 223
>pir||C71081 probable resistance ATP-binding protein - Pyrococcus horikoshii
>gi|3257326|dbj|BAA30009.1| (AP000004) 324aa long
hypothetical resistance ATP-binding protein [Pyrococcus
horikoshii]
Length = 324
Score = 161 bits (402), Expect = 1e-38
Identities = 87/241 (36%), Positives = 148/241 (61%), Gaps = 1/241 (0%)
Query: 2 IIVENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIVG 61
IIVENL K++G E ++GISF V+ GEI+ LGPNG+GK+TT+ +L+ ++ G+ IV
Sbjct: 7 IIVENLVKKYGDFEAVRGISFKVRRGEIFAFLGPNGAGKTTTVHMLTTLLKPTSGRAIVA 66
Query: 62 GVEVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAFE 121
G +V K+ +V++ +G V + P++ LT E G + G+ L++++ +L++ E
Sbjct: 67 GHDVVKESREVRKKIGVVFQDPSVDRELTAWENMYIHGRIYGLKGQELKKKIEELLKFVE 126
Query: 122 IKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKEE 181
+ ++ ++ + S G ++++ + +L+H+P+VL LDE GLDP++ E + KEE
Sbjct: 127 LWEFKDRQVKYFSGGMQRRLEIARALIHEPEVLFLDEPTIGLDPQTRAHIWEYIKTMKEE 186
Query: 182 GKSIVF-STHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKEERLEDVFLKLTQAKE 240
+F +TH + AE + DR+ II G+IIAEGT EELK++ + + F K T +
Sbjct: 187 HDMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTAEELKKLVGNDIIYVKFEKPTCIQA 246
Query: 241 E 241
E
Sbjct: 247 E 247
>gi|11498626 ABC transporter, ATP-binding protein [Archaeoglobus fulgidus]
>gi|7445710|pir||E69377 ABC transporter, ATP-binding
protein homolog - Archaeoglobus fulgidus
>gi|2649574|gb|AAB90222.1| (AE001033) ABC transporter,
ATP-binding protein [Archaeoglobus fulgidus]
Length = 275
Score = 159 bits (399), Expect = 2e-38
Identities = 89/219 (40%), Positives = 137/219 (61%), Gaps = 11/219 (5%)
Query: 1 MIIVENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIV 60
M+ V NL KR+G E +KGISF+V+ GE+ GL+G NG+GKSTT++IL+G+I G+V
Sbjct: 1 MLEVRNLFKRYGSFEAVKGISFSVRRGEVLGLIGENGAGKSTTLKILAGLIRPDGGEVRY 60
Query: 61 GGVEVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAF 120
G + ++ +KRI+GY+PE ALY+++T +E+ + + + DI L+E
Sbjct: 61 FGKDFDEE---MKRIIGYLPEIDALYDNMTVSEYLNLFADIYDVRADI-----DGLLERL 112
Query: 121 EIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKE 180
+ ++ I LS G ++K+S+ +LLHDP+VL+ DE GLDP ++ ELL E E
Sbjct: 113 NLP---DKYISDLSKGMRRKVSIARTLLHDPEVLVYDEPTGGLDPTTSLSIAELLRELAE 169
Query: 181 EGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEEL 219
GK IVFS H + E I D+V ++ G+ + G++EEL
Sbjct: 170 RGKIIVFSAHNMYYVERIADKVVVMKGGKALYFGSLEEL 208
>pir||B64816 ABC-type transport protein ybhF - Escherichia coli
>gi|1787012|gb|AAC73881.1| (AE000181) putative
ATP-binding component of a transport system [Escherichia
coli K12] >gi|4062352|dbj|BAA35454.1| (D90716) ATP
binding cassette transporter ABC2 [Escherichia coli]
Length = 583
Score = 159 bits (399), Expect = 2e-38
Identities = 82/240 (34%), Positives = 144/240 (59%), Gaps = 6/240 (2%)
Query: 1 MIIVENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIV 60
+I + L K+FG ++F VK GEI+GLLGPNG+GKSTT +++ G++ G+ +V
Sbjct: 334 VIEAKELTKKFGDFAATDHVNFAVKRGEIFGLLGPNGAGKSTTFKMMCGLLVPTSGQALV 393
Query: 61 GGVEVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAF 120
G+++ + + ++ +GY+ + +LY +LT + F GV G+ E++ ++ EAF
Sbjct: 394 LGMDLKESSGKARQHLGYMAQKFSLYGNLTVEQNLRFFSGVYGLRGRAQNEKISRMSEAF 453
Query: 121 EIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKE 180
+K + L G KQ+++L SL+H+P +L LDE +G+DP + R F + E
Sbjct: 454 GLKSIASHATDELPLGFKQRLALACSLMHEPDILFLDEPTSGVDPLTRREFWLHINSMVE 513
Query: 181 EGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKEER-----LEDVFLKL 235
+G +++ +TH + AE CDR+G++Y+G++IA GT ++LK S + +E F++L
Sbjct: 514 KGVTVMVTTHFMDEAE-YCDRIGLVYRGKLIASGTPDDLKAQSANDEQPDPTMEQAFIQL 572
Score = 123 bits (307), Expect = 1e-27
Identities = 73/223 (32%), Positives = 125/223 (55%), Gaps = 3/223 (1%)
Query: 1 MIIVENLRKRFGG--KEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKV 58
+I + L KRF G K + + T+ G + GL+GP+G+GK+T MR+L+G++ G
Sbjct: 10 VITLNGLEKRFPGMDKPAVAPLDCTIHAGYVTGLVGPDGAGKTTLMRMLAGLLKPDSGSA 69
Query: 59 IVGGVEVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVE 118
V G + K+ + ++GY+P+ LYE LT E + +R + + ++ +L+E
Sbjct: 70 TVIGFDPIKNDGALHAVLGYMPQKFGLYEDLTVMENLNLYADLRSVTGEARKQTFARLLE 129
Query: 119 AFEIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEF 178
+ + +L G LS G KQK+ L +L+ +PKVL+LDE G+DP S R ++++E
Sbjct: 130 FTSLGPFTGRLAGKLSGGMKQKLGLACTLVGEPKVLLLDEPGVGVDPISRRELWQMVHEL 189
Query: 179 KEEGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKE 221
EG I++ST L AE C V ++ +G ++ +G + L +
Sbjct: 190 AGEGMLILWSTSYLDEAEQ-CRDVLLMNEGELLYQGEPKALTQ 231
>sp|P75776|YBHF_ECOLI HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PROTEIN YBHF
Length = 578
Score = 159 bits (399), Expect = 2e-38
Identities = 82/240 (34%), Positives = 144/240 (59%), Gaps = 6/240 (2%)
Query: 1 MIIVENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIV 60
+I + L K+FG ++F VK GEI+GLLGPNG+GKSTT +++ G++ G+ +V
Sbjct: 329 VIEAKELTKKFGDFAATDHVNFAVKRGEIFGLLGPNGAGKSTTFKMMCGLLVPTSGQALV 388
Query: 61 GGVEVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAF 120
G+++ + + ++ +GY+ + +LY +LT + F GV G+ E++ ++ EAF
Sbjct: 389 LGMDLKESSGKARQHLGYMAQKFSLYGNLTVEQNLRFFSGVYGLRGRAQNEKISRMSEAF 448
Query: 121 EIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKE 180
+K + L G KQ+++L SL+H+P +L LDE +G+DP + R F + E
Sbjct: 449 GLKSIASHATDELPLGFKQRLALACSLMHEPDILFLDEPTSGVDPLTRREFWLHINSMVE 508
Query: 181 EGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKEER-----LEDVFLKL 235
+G +++ +TH + AE CDR+G++Y+G++IA GT ++LK S + +E F++L
Sbjct: 509 KGVTVMVTTHFMDEAE-YCDRIGLVYRGKLIASGTPDDLKAQSANDEQPDPTMEQAFIQL 567
Score = 123 bits (307), Expect = 1e-27
Identities = 73/223 (32%), Positives = 125/223 (55%), Gaps = 3/223 (1%)
Query: 1 MIIVENLRKRFGG--KEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKV 58
+I + L KRF G K + + T+ G + GL+GP+G+GK+T MR+L+G++ G
Sbjct: 5 VITLNGLEKRFPGMDKPAVAPLDCTIHAGYVTGLVGPDGAGKTTLMRMLAGLLKPDSGSA 64
Query: 59 IVGGVEVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVE 118
V G + K+ + ++GY+P+ LYE LT E + +R + + ++ +L+E
Sbjct: 65 TVIGFDPIKNDGALHAVLGYMPQKFGLYEDLTVMENLNLYADLRSVTGEARKQTFARLLE 124
Query: 119 AFEIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEF 178
+ + +L G LS G KQK+ L +L+ +PKVL+LDE G+DP S R ++++E
Sbjct: 125 FTSLGPFTGRLAGKLSGGMKQKLGLACTLVGEPKVLLLDEPGVGVDPISRRELWQMVHEL 184
Query: 179 KEEGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKE 221
EG I++ST L AE C V ++ +G ++ +G + L +
Sbjct: 185 AGEGMLILWSTSYLDEAEQ-CRDVLLMNEGELLYQGEPKALTQ 226
>dbj|BAB04722.1| (AP001510) ABC transporter (ATP-binding protein) [Bacillus
halodurans]
Length = 305
Score = 159 bits (398), Expect = 3e-38
Identities = 84/219 (38%), Positives = 136/219 (61%), Gaps = 5/219 (2%)
Query: 6 NLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIVGGVEV 65
N+ KRFG L I+ V+ GEIYG +GPNG+GKSTT+RIL GI+ EG+ + G +V
Sbjct: 8 NVTKRFGAFTALNRINLEVQRGEIYGFIGPNGAGKSTTIRILLGILKASEGEAKIFGKDV 67
Query: 66 AKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAFEIKKY 125
D +++ + + YVP +L+ +LT E +RG + ++R +E F++
Sbjct: 68 WSDAVEIHKHLAYVPGDVSLWPNLTGGEVIDLFMKLRG---SVDKKRRDHFIERFKLDP- 123
Query: 126 MNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKEEGKSI 185
++ T S G +QK++L+++ + ILDE +GLDP R+F+E + E KE GKS+
Sbjct: 124 -SKKCRTYSKGNRQKVALVAAFASGADLYILDEPTSGLDPLMERVFQECVLEAKEAGKSV 182
Query: 186 VFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISK 224
+ S+H+L+ E +CD+VGII QG +I GT++EL+ +++
Sbjct: 183 LLSSHILSEVERLCDKVGIIRQGEMIETGTLDELRHLTR 221
>dbj|BAA75396.1| (AB013378) YhaQ [Bacillus halodurans]
Length = 314
Score = 159 bits (398), Expect = 3e-38
Identities = 84/219 (38%), Positives = 136/219 (61%), Gaps = 5/219 (2%)
Query: 6 NLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIVGGVEV 65
N+ KRFG L I+ V+ GEIYG +GPNG+GKSTT+RIL GI+ EG+ + G +V
Sbjct: 17 NVTKRFGAFTALNRINLEVQRGEIYGFIGPNGAGKSTTIRILLGILKASEGEAKIFGKDV 76
Query: 66 AKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAFEIKKY 125
D +++ + + YVP +L+ +LT E +RG + ++R +E F++
Sbjct: 77 WSDAVEIHKHLAYVPGDVSLWPNLTGGEVIDLFMKLRG---SVDKKRRDHFIERFKLDP- 132
Query: 126 MNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKEEGKSI 185
++ T S G +QK++L+++ + ILDE +GLDP R+F+E + E KE GKS+
Sbjct: 133 -SKKCRTYSKGNRQKVALVAAFASGADLYILDEPTSGLDPLMERVFQECVLEAKEAGKSV 191
Query: 186 VFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISK 224
+ S+H+L+ E +CD+VGII QG +I GT++EL+ +++
Sbjct: 192 LLSSHILSEVERLCDKVGIIRQGEMIETGTLDELRHLTR 230
>pir||S74048 probable daunorubicin resistance protein - Sulfolobus solfataricus
>gi|1707742|emb|CAA69462.1| (Y08256) daunorubicin
resistance ATP-binding protein DrrA [Sulfolobus
solfataricus]
Length = 339
Score = 158 bits (396), Expect = 5e-38
Identities = 90/250 (36%), Positives = 149/250 (59%), Gaps = 7/250 (2%)
Query: 6 NLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIVGGVEV 65
NL KRFG + I+F V +GEI+G LGPNG+GKSTT+++L+ ++ EG V G +V
Sbjct: 16 NLTKRFGKFVAVDHINFEVYEGEIFGFLGPNGAGKSTTIKMLTTVLKPSEGTATVSGYDV 75
Query: 66 AKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAFEIKKY 125
K P V++ +G VP+ E LT E + G+ GIPK I EER ++L+E E+
Sbjct: 76 IKQPALVRQSIGVVPQEYTADEDLTGWENMMMMAGLYGIPKRIAEERAKELLEMVELTYA 135
Query: 126 MNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKEEGKSI 185
+ + T S G ++++ + SL+ P++L LDE GLD ++ + + + KEE K
Sbjct: 136 AKRKVETYSGGMRRRLEIAMSLISRPRILFLDEPTLGLDAQTRAAIWQYIMKLKEEYKMT 195
Query: 186 VF-STHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKEERLEDVFLKLTQAKEEIA- 243
+F +TH L A++ DR+ II +G+I+A G+ +ELK E++ + L + +E+A
Sbjct: 196 IFVTTHYLEEADMYGDRIAIIDKGKILAIGSPKELK-----EKVGGDVVSLQTSNDELAI 250
Query: 244 QVVSALKEAL 253
+++S+ K+ +
Sbjct: 251 KIISSSKDGI 260
>gb|AAK42315.1| ABC transporter, ATP binding protein. [Sulfolobus solfataricus]
Length = 339
Score = 158 bits (396), Expect = 5e-38
Identities = 90/250 (36%), Positives = 149/250 (59%), Gaps = 7/250 (2%)
Query: 6 NLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIVGGVEV 65
NL KRFG + I+F V +GEI+G LGPNG+GKSTT+++L+ ++ EG V G +V
Sbjct: 16 NLTKRFGKFVAVDHINFEVYEGEIFGFLGPNGAGKSTTIKMLTTVLKPSEGTATVSGYDV 75
Query: 66 AKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAFEIKKY 125
K P V++ +G VP+ E LT E + G+ GIPK I EER ++L+E E+
Sbjct: 76 IKQPALVRQSIGVVPQEYTADEDLTGWENMMMMAGLYGIPKRIAEERAKELLEMVELTYA 135
Query: 126 MNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKEEGKSI 185
+ + T S G ++++ + SL+ P++L LDE GLD ++ + + + KEE K
Sbjct: 136 AKRKVETYSGGMRRRLEIAMSLISRPRILFLDEPTLGLDAQTRAAIWQYIMKLKEEYKMT 195
Query: 186 VF-STHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKEERLEDVFLKLTQAKEEIA- 243
+F +TH L A++ DR+ II +G+I+A G+ +ELK E++ + L + +E+A
Sbjct: 196 IFVTTHYLEEADMYGDRIAIIDKGKILAIGSPKELK-----EKVGGDVVSLQTSNDELAI 250
Query: 244 QVVSALKEAL 253
+++S+ K+ +
Sbjct: 251 KIISSSKDGI 260
>pir||B71030 probable ATP-binding transport protein - Pyrococcus horikoshii
>gi|3257959|dbj|BAA30642.1| (AP000006) 226aa long
hypothetical ATP-binding transport protein [Pyrococcus
horikoshii]
Length = 226
Score = 158 bits (395), Expect = 7e-38
Identities = 79/220 (35%), Positives = 137/220 (61%)
Query: 15 EVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIVGGVEVAKDPLQVKR 74
+ L+GI+F++++GEI+GL+GPNG+GKSTT++IL+ ++ GK V G +V K+ +V++
Sbjct: 2 KALRGITFSIEEGEIFGLIGPNGAGKSTTLKILATLLRPTGGKAEVFGFDVVKEADEVRK 61
Query: 75 IVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAFEIKKYMNQLIGTLS 134
++ Y+PE Y+ LT E+ F+ + E+ ++ +E + + I T S
Sbjct: 62 LISYLPEEAGAYKRLTGLEYLKFMAKLYAKDSRKAEKMLKLGIELSGLGDRLRDKISTYS 121
Query: 135 FGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKEEGKSIVFSTHVLAL 194
G +++ L +L+ PK+ ILDE +GLD +A R ++ EF +EG + + S+H +
Sbjct: 122 KGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRIIREFSKEGVTFLISSHNMLE 181
Query: 195 AELICDRVGIIYQGRIIAEGTVEELKEISKEERLEDVFLK 234
E +CDRV +I++G+I+ G+ ELKE K E LE+VF++
Sbjct: 182 VEYLCDRVALIHKGKIVEVGSPHELKEKHKAENLEEVFME 221
>pir||S76278 ABC-type transport protein sll0759 - Synechocystis sp. (strain PCC
6803) >gi|1001505|dbj|BAA10130.1| (D64000) ABC
transporter [Synechocystis sp.]
Length = 347
Score = 158 bits (395), Expect = 7e-38
Identities = 90/248 (36%), Positives = 143/248 (57%), Gaps = 2/248 (0%)
Query: 4 VENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIVGGV 63
V+ LRK++G +K ISF V GEI+GLLGPNG+GK+TT+R L + G++ + GV
Sbjct: 13 VKQLRKKYGAIPAVKDISFAVPRGEIFGLLGPNGAGKTTTIRCLCTLAKPDGGELWIDGV 72
Query: 64 EVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAFEIK 123
V DP Q +R +GYV + A+ + LT E + + ++R+ +L++ +
Sbjct: 73 NVLSDPRQARRRLGYVAQEVAIDKILTGRELLQLQASLYHLDAISSQKRIDQLLDILGLT 132
Query: 124 KYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKEEGK 183
Y +Q GT S G K+++ L + LLH P VL+LDE GLD +S I E L + ++ G
Sbjct: 133 AYADQKTGTYSGGLKKRLDLAAGLLHQPTVLVLDEPSVGLDIESRFILWEFLRQLRDAGT 192
Query: 184 SIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKEERLEDVFLKLT--QAKEE 241
++V ++H L + + DR+ II QG +IA GT ELK+ +R+ + T Q E+
Sbjct: 193 TVVITSHYLEEIDALADRLAIIDQGTVIATGTPTELKDRVGGDRVTLRIKEFTADQEAEK 252
Query: 242 IAQVVSAL 249
+Q++ +L
Sbjct: 253 ASQILRSL 260
>dbj|BAB05817.1| (AP001514) ABC transporter (ATP-binding protein) (daunorubicin
resistance) [Bacillus halodurans]
Length = 310
Score = 157 bits (394), Expect = 9e-38
Identities = 86/251 (34%), Positives = 145/251 (57%), Gaps = 3/251 (1%)
Query: 1 MIIVENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIV 60
M+ NL K F G+ ++ ++ + GE GLLGPNG+GKSTT+ ++S +I G++ +
Sbjct: 1 MLETINLCKTFKGQPAVQEVNMYLNSGESVGLLGPNGAGKSTTISMISTLIKPTSGEIKL 60
Query: 61 GGVEVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAF 120
G+ + P +++I+G VP+ ALY+ L+ E F G + LE R++ +E
Sbjct: 61 NGINIISHPGDIRKILGVVPQELALYQELSAYENLKFFGSTYKMKGKHLENRIQHALEIV 120
Query: 121 EIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKE 180
+K L+ T S G K++I++ ++LLH+PK+LILDE G+DP+S E + E
Sbjct: 121 GLKDRQKDLVKTFSGGMKRRINIAAALLHEPKILILDEPTVGIDPQSRNHILETVRTLNE 180
Query: 181 -EGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKEERLEDVFLKLTQAK 239
EG ++++++H + E +CDR+ I+ G IIA GT EEL I E + + ++L++
Sbjct: 181 NEGTTVLYTSHYMEEVEQLCDRLYIMDHGEIIAAGTKEELLSILSTE--DTIKVELSKID 238
Query: 240 EEIAQVVSALK 250
E Q V ++
Sbjct: 239 ETFVQNVKMIE 249
>pir||B75459 sodium extrusion protein NatA - Deinococcus radiodurans (strain
R1) >gi|6458650|gb|AAF10504.1|AE001945_8 (AE001945)
sodium extrusion protein NatA [Deinococcus radiodurans]
Length = 244
Score = 157 bits (394), Expect = 9e-38
Identities = 80/240 (33%), Positives = 141/240 (58%)
Query: 1 MIIVENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIV 60
M+ +++L K +G + L+ ++F+ +DGE++GLLGPNG+GK+T +RIL+ +++ G V V
Sbjct: 1 MLDIQHLSKSYGSFQALRDVTFSARDGEVFGLLGPNGAGKTTLLRILATLLSPTSGSVTV 60
Query: 61 GGVEVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAF 120
G++ +D V+R +G V L LT E + + + E R+ +L +
Sbjct: 61 AGLDTQRDAEAVRRQIGVVNGGMGLPARLTGREVLRSFAALYDMGRAQTEARIAELDDRL 120
Query: 121 EIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKE 180
E+ + ++ G S G KQK+ + +++ DP VL+LDEA +GLD + R + + + +
Sbjct: 121 ELGRTLDTRAGEYSTGMKQKVIIARAVIQDPAVLVLDEAASGLDIFARRTLLDFVAQTRA 180
Query: 181 EGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKEERLEDVFLKLTQAKE 240
G+ ++STHV++ AE +CDRV I++QG ++A T+ + E + E LE F L + E
Sbjct: 181 PGRLTLYSTHVMSEAEEVCDRVAILHQGELVALDTIPAILERTGERNLERAFFTLLKGGE 240
>pir||C71197 probable ATP-binding transport protein - Pyrococcus horikoshii
>gi|3258287|dbj|BAA30970.1| (AP000007) 318aa long
hypothetical ATP-binding transport protein [Pyrococcus
horikoshii]
Length = 318
Score = 157 bits (393), Expect = 1e-37
Identities = 92/244 (37%), Positives = 145/244 (58%), Gaps = 13/244 (5%)
Query: 1 MIIVENLRKRFGGK-----------EVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSG 49
+I V NLRK + K E LKGI+F VK GE++GLLGPNG+GK+TT++IL+
Sbjct: 3 VIEVRNLRKLYPKKIPLPFRKVEWFEALKGITFRVKKGELFGLLGPNGAGKTTTIKILTT 62
Query: 50 IITDFEGKVIVGGVEVAKDPLQVKRIVGYVPE-TPALYESLTPAEFFSFVGGVRGIPKDI 108
++ G+ V G++V KD ++++ + V E LY LT E + + IP+
Sbjct: 63 LLEPSSGEAKVLGLDVVKDAREIRKRINLVAEGERTLYWRLTAYENLRYFASIYYIPRRE 122
Query: 109 LEERVRKLVEAFEIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSA 168
E+R+ +L++ + N L+ S G KQ++++ +L++DP+VL LDE GLD +SA
Sbjct: 123 AEKRIEELLKMVGLWDRRNDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQSA 182
Query: 169 RIFRELLYEF-KEEGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKEER 227
REL+ EEGK+++ +TH + AE +CDR+ II G+IIA T E LK + + +
Sbjct: 183 VFVRELVRRLVDEEGKTVLLTTHYMNEAEELCDRIAIIDHGKIIALNTPEGLKRMVRNDT 242
Query: 228 LEDV 231
+ +V
Sbjct: 243 IVEV 246
>dbj|BAB04910.1| (AP001511) ABC transporter (ATP-binding protein) [Bacillus
halodurans]
Length = 247
Score = 157 bits (392), Expect = 2e-37
Identities = 85/243 (34%), Positives = 143/243 (57%), Gaps = 3/243 (1%)
Query: 2 IIVENLRKRFG-GKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIV 60
++VE L + K VL + ++ E+ GL+G NG+GKSTT++ + G++ +G V++
Sbjct: 5 VVVEGLTGGYRPNKPVLHDLHLKIRANELVGLIGLNGAGKSTTIKHILGLMEPHKGSVMI 64
Query: 61 GGVEVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAF 120
G + D +R + Y+PETP LYE LT E GI + EER + L++ F
Sbjct: 65 NGNTITTDRETYRRSLAYIPETPILYEELTLWEHMELTALAYGIERKAFEERSKLLLDEF 124
Query: 121 EIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKE 180
+ K + S G +QK+ +I + L DP V I+DE + GLDP + F +LL K+
Sbjct: 125 RMTKMKHWYPSHFSKGMRQKVMIICAFLIDPPVYIVDEPIVGLDPIGIQSFLQLLATKKK 184
Query: 181 EGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELK-EIS-KEERLEDVFLKLTQA 238
G +++ STH+LA AE CDR I+ +GRI+ EGT+E ++ E++ + L+D+++++T+
Sbjct: 185 NGAAVLMSTHILATAERYCDRFIILNRGRIVLEGTLESMRAELNMPDATLDDIYIEMTKE 244
Query: 239 KEE 241
+ +
Sbjct: 245 ESQ 247
>pir||C72303 ABC transporter, ATP-binding protein - Thermotoga maritima (strain
MSB8) >gi|4981569|gb|AAD36105.1|AE001764_8 (AE001764)
ABC transporter, ATP-binding protein [Thermotoga
maritima]
Length = 293
Score = 157 bits (392), Expect = 2e-37
Identities = 82/220 (37%), Positives = 135/220 (61%), Gaps = 5/220 (2%)
Query: 1 MIIVENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIV 60
++ V +L K +G ++G++F+V++GEI+G +GPNG+GK+TT+R+L G+I G +
Sbjct: 3 VVEVRDLTKYYGKSRGVEGVTFSVEEGEIFGFIGPNGAGKTTTIRLLLGLIFPDSGLAEI 62
Query: 61 GGVEVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAF 120
G +V K+ ++++ VGY+P + Y +T EF + + + + V++L F
Sbjct: 63 FGKDVLKEGKEIRKNVGYIPGEVSFYPEVTVEEFLRYSASFY---EKVDWDYVKELCGVF 119
Query: 121 EIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKE 180
+ + I LS G K+K++++ +L+H PK+LILDE NGLDP F E+L KE
Sbjct: 120 SLDT--KKRIKELSMGNKKKVAIVQALMHRPKLLILDEPTNGLDPIVQNTFFEILKNEKE 177
Query: 181 EGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELK 220
+G ++ FS+H+L+ E +CDRV +I GRII VE LK
Sbjct: 178 KGTTVFFSSHILSEVERLCDRVAMIKDGRIIRVEKVENLK 217
>gb|AAG19180.1| (AE005015) ABC transporter, ATP-binding protein; Trp5
[Halobacterium sp. NRC-1]
Length = 287
Score = 155 bits (388), Expect = 5e-37
Identities = 75/221 (33%), Positives = 130/221 (57%), Gaps = 3/221 (1%)
Query: 1 MIIVENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIV 60
MI V+ L KR+GG + G+SF V GE++GL+GPNG+GK++T+++L G++ G + V
Sbjct: 1 MISVQRLEKRYGGVTAVDGVSFDVGAGEVFGLVGPNGAGKTSTLKMLCGLVEPSAGDITV 60
Query: 61 GGVEVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAF 120
G + + +R +G++PE LY+ +TP + F + + + ER+ ++
Sbjct: 61 NGFDAGDTAM--RRTLGFLPEESPLYDEMTPRSYLRFFADLYDVDRATANERIEAALDRL 118
Query: 121 EIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKE 180
++ ++ +G S G +K+++ SL++DP VL+ DE +GLDP + E E
Sbjct: 119 DLDA-RDRPVGDFSKGMTRKVAIARSLVNDPDVLVYDEPASGLDPLTTNTVIEFTRELAA 177
Query: 181 EGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKE 221
+GK+IVFS H L E +CDRV I+ G+ A GT+ ++++
Sbjct: 178 DGKTIVFSAHDLHHVESVCDRVAIMRDGQFAATGTLADIRD 218
>pir||A75083 ATP-binding transport protein PAB1668 - Pyrococcus abyssi (strain
Orsay) >gi|5458478|emb|CAB49966.1| (AJ248286)
ATP-BINDING TRANSPORT PROTEIN [Pyrococcus abyssi]
Length = 315
Score = 155 bits (388), Expect = 5e-37
Identities = 76/226 (33%), Positives = 137/226 (59%)
Query: 1 MIIVENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIV 60
+I + L K FG + V+ ++ V G +YG LGPNG+GK+TT+++L+G + G++ +
Sbjct: 5 IIETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIKI 64
Query: 61 GGVEVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAF 120
G+E+ ++ +++ R VGY+PE P Y+ +T EF ++G + G+PKD + R+L+
Sbjct: 65 IGMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMAYT 124
Query: 121 EIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKE 180
+ + I LS G +Q++ S+L+ DP++LILDE + LDP F + E +
Sbjct: 125 GVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILELAK 184
Query: 181 EGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKEE 226
GK++ S+H+++ E +C+ VG+I G++I +G V +L +I +
Sbjct: 185 SGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAKIESTD 230
>pir||C72568 probable ATP-binding transport protein APE1829 - Aeropyrum pernix
(strain K1) >gi|5105519|dbj|BAA80832.1| (AP000062) 345aa
long hypothetical ATP-binding transport protein
[Aeropyrum pernix]
Length = 345
Score = 154 bits (386), Expect = 8e-37
Identities = 93/230 (40%), Positives = 135/230 (58%), Gaps = 10/230 (4%)
Query: 1 MIIVENLRKRF-GGK------EVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITD 53
MI L KRF G+ E LKG+SF+V +GEIY LGPNG+GK+TT+RILS ++
Sbjct: 5 MIEARGLVKRFVSGRIRRRVVEALKGVSFSVYEGEIYSFLGPNGAGKTTTVRILSTLLDP 64
Query: 54 FEGKVIVGGVEVAKDPLQVKRIVGYVPETP-ALYESLTPAEFFSFVGGVRGIPKDILEER 112
G+ V G +V K+ +V++ +G + Y LT E + G + GIP+ L+ R
Sbjct: 65 DGGEARVAGFDVVKERWEVRKRIGVMLSVERGFYWKLTGRENLYYFGRIYGIPQGELKSR 124
Query: 113 VRKLVEAFEIKKY--MNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARI 170
++++++ + ++ +S G K ++ L LL DP+VLILDE GLDP SAR
Sbjct: 125 IKEVLDLVGLTDLGGADKPFEEMSLGMKARLGLARVLLKDPEVLILDEPTLGLDPASART 184
Query: 171 FRELLYEFKEEGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELK 220
R ++ EG++I +TH + AE+I DRVGII GRI EGT +ELK
Sbjct: 185 IRGVIRSLASEGRTIFITTHNMVEAEMISDRVGIIIGGRIAMEGTPDELK 234
>gb|AAG19009.1| (AE005000) daunorubicin resistance ABC transporter ATP-binding
protein; Trp3 [Halobacterium sp. NRC-1]
Length = 252
Score = 153 bits (384), Expect = 1e-36
Identities = 81/238 (34%), Positives = 135/238 (56%), Gaps = 4/238 (1%)
Query: 2 IIVENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIVG 61
I + L KR+G + + + V G +YG LGPNG+GK+TTMR+L+ + G V
Sbjct: 6 IRADGLTKRYGDEAAVDDLDLAVPAGSVYGFLGPNGAGKTTTMRLLTSLTDPTAGTAEVA 65
Query: 62 GVEVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAFE 121
GV V RI GY+P P +++ LT E V + G+ + R+ L+E F+
Sbjct: 66 GVPVTDRAALTPRI-GYLPADPPVFDELTGWEQLRHVARLHGLDDGEADTRIESLLERFD 124
Query: 122 IKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKEE 181
+ ++ I + S G +K+ +++++LHDP VL LDE +GLDP++AR R+ + +
Sbjct: 125 LLADADRRIESYSTGMTKKVGVVAAMLHDPDVLFLDEPTSGLDPRAARTVRDTVADLSAG 184
Query: 182 GKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKE---ERLEDVFLKLT 236
+++ STHVL + + + D +G+I G ++A+G E LK ++E LE VF+++T
Sbjct: 185 DATVLLSTHVLPVVDELADTIGVIDDGVLVADGDPENLKSTAREGSAADLETVFMEVT 242
>sp|P54592|YHCH_BACSU HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PROTEIN 2 IN GLPD-CSPB
INTERGENIC REGION >gi|7445695|pir||D69822 ABC
transporter (ATP-binding protein) homolog yhcH -
Bacillus subtilis >gi|1239983|emb|CAA65691.1| (X96983)
hypothetical protein [Bacillus subtilis]
>gi|2633231|emb|CAB12736.1| (Z99108) similar to ABC
transporter (ATP-binding protein) [Bacillus subtilis]
Length = 305
Score = 153 bits (382), Expect = 2e-36
Identities = 80/239 (33%), Positives = 147/239 (61%), Gaps = 10/239 (4%)
Query: 4 VENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIVGGV 63
++N+ K G+ ++ +SFT+++GE++G LGPNG+GK+TT+R++ G++ +G V++ G
Sbjct: 7 LKNVTKNIRGRTIIDDLSFTIREGEVFGFLGPNGAGKTTTIRMMVGLMKLSKGDVLICGQ 66
Query: 64 EVAKDPLQVKRIVGYVPETPALYESLTP-AEFFSFVGGVRGIPKDILEERVRKLVEAFEI 122
+ K+ + + +G + E P LY+ L+ F V+G+ K E++ ++VE +
Sbjct: 67 SITKEYAKAIKHIGAIVENPELYKFLSGYKNLQQFARMVKGVTK----EKIDEVVELVGL 122
Query: 123 KKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEF-KEE 181
++ + T S G +Q++ L LLHDPKVLILDE NGLDP R R+ L + +E
Sbjct: 123 TDRIHDKVKTYSLGMRQRLGLAQCLLHDPKVLILDEPTNGLDPAGIREIRDHLKKLTRER 182
Query: 182 GKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKEERLEDVFLKLTQAKE 240
G +++ S+H+L+ EL+CDR+ I+ +G++I ++ +K+ + +E + F ++ Q E
Sbjct: 183 GMAVIVSSHLLSEMELMCDRIAILQKGKLI---DIQNVKDENIDEN-DTYFFQVEQPSE 237
>pir||I40516 spaF protein - Bacillus subtilis
Length = 456
Score = 153 bits (382), Expect = 2e-36
Identities = 85/253 (33%), Positives = 149/253 (58%), Gaps = 16/253 (6%)
Query: 1 MIIVENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIV 60
++ ++L K+FG + + +S TV+ IYGLLGPNG+GKSTT++IL+GI+ G+++
Sbjct: 14 LLETKSLTKKFGKETAVADVSLTVQKNSIYGLLGPNGAGKSTTLKILTGILRKTSGEILF 73
Query: 61 GGVEVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAF 120
G + + LQ +G + E P LY++LT E + G+ +D R+ +++
Sbjct: 74 DGHKWKRSDLQT---IGSLIEAPPLYDNLTAFENVKVHATLLGLSED----RIHSVLKTV 126
Query: 121 EIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKE 180
+++ + G S G +Q++ + +LL+ PK+LILDE NGLDP + R+L+ F +
Sbjct: 127 DMQHAGKKRAGQFSMGMRQRLGIAIALLNHPKLLILDEPTNGLDPIGIQELRDLIRSFPQ 186
Query: 181 EGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKEERLEDVFL---KLTQ 237
EG +++ S+H+L+ E I D +GII G + +G EI+K + LE +F+ K T+
Sbjct: 187 EGITVILSSHILSEVEQIADHIGIIIDGHLGYQG------EINKADDLEHLFMEVVKSTR 240
Query: 238 AKEEIAQVVSALK 250
KE + + ++ +K
Sbjct: 241 EKEGVKRSINYIK 253
>pir||A70082 ABC transporter (ATP-binding protein) homolog yxlF - Bacillus
subtilis >gi|1783260|dbj|BAA11737.1| (D83026) homologous
to many ATP-binding transport proteins; hypothetical
[Bacillus subtilis] >gi|2636401|emb|CAB15892.1| (Z99123)
similar to ABC transporter (ATP-binding protein)
[Bacillus subtilis]
Length = 295
Score = 153 bits (382), Expect = 2e-36
Identities = 84/237 (35%), Positives = 144/237 (60%), Gaps = 14/237 (5%)
Query: 1 MIIVENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIV 60
M+ +E+L K + E +K +SF V + E LLGPNG+GK+TT+++L+G+++ G + +
Sbjct: 1 MLSIESLCKSYRHHEAVKNVSFHVNENECVALLGPNGAGKTTTLQMLAGLLSPTSGTIKL 60
Query: 61 GGVEVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAF 120
G + +R++GY+P+ PA Y +T EF +F G + G+ K +E++ +++E
Sbjct: 61 LGEKKLD-----RRLIGYLPQYPAFYSWMTANEFLTFAGRLSGLSKRKCQEKIGEMLEFV 115
Query: 121 EIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKE 180
+ + ++ IG S G KQ++ L +LLH PK LILDE ++ LDP +++ E K+
Sbjct: 116 GLHEAAHKRIGGYSGGMKQRLGLAQALLHKPKFLILDEPVSALDPTGRFEVLDMMRELKK 175
Query: 181 EGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKE--------ISKEERLE 229
+++FSTHVL AE +CD+V I+ G I +G ++ELK+ +S +E+LE
Sbjct: 176 H-MAVLFSTHVLHDAEQVCDQVVIMKNGEISWKGELQELKQQQQTNVFTLSVKEKLE 231
>dbj|BAB04773.1| (AP001510) transposase (08)/ABC transporter (ATP-binding protein)
[Bacillus halodurans]
Length = 901
Score = 153 bits (382), Expect = 2e-36
Identities = 75/223 (33%), Positives = 139/223 (61%), Gaps = 1/223 (0%)
Query: 1 MIIVENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIV 60
MI V +L K + ++V+KGI+ ++ GE+ GLLGPNG+GKSTT+ ++S +I G V++
Sbjct: 592 MIEVIDLSKTYRNRQVVKGINMFIEKGEMVGLLGPNGAGKSTTISMISSLIQPTSGDVLI 651
Query: 61 GGVEVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAF 120
G + K ++ I+G VP+ A+Y LT E +F G + G+ + L+ R+ ++
Sbjct: 652 KGGSIHKQSKAIRSILGVVPQEIAVYHDLTARENLAFFGKIYGLKGEELKHRMESTLQLV 711
Query: 121 EIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKE 180
+++ N + T S G K+++++ +LLH+P+++I+DE G+DP+S E + +
Sbjct: 712 GLEERQNDRVHTFSGGMKRRLNIAVALLHEPELIIMDEPTVGIDPQSRSHILETVKTLNQ 771
Query: 181 EGK-SIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEI 222
E + ++++++H + E +CDR+ I+ +G +IA GT +E+K I
Sbjct: 772 EREMTVIYTSHYMEEVEYLCDRLYIMDRGEVIASGTKDEVKGI 814
>dbj|BAA83955.1| (AB024563) YFIL [Bacillus halodurans]
Length = 310
Score = 152 bits (380), Expect = 4e-36
Identities = 75/223 (33%), Positives = 139/223 (61%), Gaps = 1/223 (0%)
Query: 1 MIIVENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIV 60
MI V +L K + ++V+KGI+ ++ GE+ GLLGPNG+GKSTT+ ++S +I G V++
Sbjct: 1 MIEVIDLSKTYRNRQVVKGINMFIEKGEMVGLLGPNGAGKSTTISMISSLIQPTSGDVLI 60
Query: 61 GGVEVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAF 120
G + K ++ I+G VP+ A+Y LT E +F G + G+ + L+ R+ ++
Sbjct: 61 KGGSIHKRSKAIRSILGVVPQEIAVYHDLTARENLAFFGKIYGLKGEELKHRMESTLQLV 120
Query: 121 EIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKE 180
+++ N + T S G K+++++ +LLH+P+++I+DE G+DP+S E + +
Sbjct: 121 GLEERQNDRVHTFSGGMKRRLNIAVALLHEPELIIMDEPTVGIDPQSRSHILETVKTLNQ 180
Query: 181 EGK-SIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEI 222
E + ++++++H + E +CDR+ I+ +G +IA GT +E+K I
Sbjct: 181 EREMTVIYTSHYMEEVEYLCDRLYIMDRGEVIASGTKDEVKGI 223
>pir||E69771 ABC transporter (ATP-binding protein) homolog ydbJ - Bacillus
subtilis >gi|1881259|dbj|BAA19286.1| (AB001488) PROBABLE
TRANSPORT ATP BINDING PROTEIN. [Bacillus subtilis]
>gi|2632749|emb|CAB12256.1| (Z99106) similar to ABC
transporter (ATP-binding protein) [Bacillus subtilis]
Length = 308
Score = 152 bits (380), Expect = 4e-36
Identities = 84/227 (37%), Positives = 133/227 (58%), Gaps = 4/227 (1%)
Query: 4 VENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIVGGV 63
+E L K+ G K++LK IS V +GEI GLLGPNGSGK+T +RI+ G++ G V + G
Sbjct: 8 IEGLDKKIGSKQILKQISMDVMEGEIIGLLGPNGSGKTTLIRIIVGLLKQNSGSVTISGF 67
Query: 64 EVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAFEIK 123
+ + + VG + E P Y LT E + K I +ER+ ++VE +
Sbjct: 68 QHDTEFEKAMEAVGAIVENPEFYPYLTGWENLKHFANMH---KKIADERLDEVVERVGLT 124
Query: 124 KYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKE-EG 182
++ + T S G +Q++ + ++LH PK+LILDE NGLDP + FR+ + E E EG
Sbjct: 125 SAIHDKVKTYSLGMRQRLGIAQAILHRPKLLILDEPTNGLDPAGMKDFRDHIKELAEMEG 184
Query: 183 KSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKEERLE 229
+++F+TH+L E +CDRV II +G I AE +++ + +++ +E
Sbjct: 185 TAVLFATHLLREVEDLCDRVIIIQKGEIKAEVSLQGTDQTTEKAIIE 231
>gb|AAK42548.1| ABC transporter, ATP binding protein [Sulfolobus solfataricus]
Length = 248
Score = 151 bits (378), Expect = 7e-36
Identities = 86/238 (36%), Positives = 140/238 (58%), Gaps = 8/238 (3%)
Query: 2 IIVENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIVG 61
+ V NLRKR G KE+LKG+SF V+ GE++G++GPNG+GK+TT+RIL+GII +F G V
Sbjct: 10 VSVTNLRKRIGNKEILKGLSFDVESGEVFGIVGPNGAGKTTTLRILAGIIKNFNGDAKVF 69
Query: 62 GVEVAKDPLQVKR--IVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKL-VE 118
G+ P++ K+ + Y+PE YE LT E F + L+E+ KL +E
Sbjct: 70 GLR----PIEAKQNGYISYMPEDAFPYEKLTGYENLDFYAELYAKGDKELKEKYLKLGIE 125
Query: 119 AFEIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEF 178
+ + + S G K+++ + +L+ PK+ +LDE + LD +SA R ++ E
Sbjct: 126 IANLGERIYDKTAEYSRGMKRRLIIARTLMVMPKLSVLDEPTSALDVESAVRIRNIILEM 185
Query: 179 -KEEGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKEERLEDVFLKL 235
+ +I+ S+H + E +CDR+ +I GRI+A G +E+ + + + LE+ F+KL
Sbjct: 186 ARRYNMTIILSSHNMLEVEYLCDRITLINDGRIVANGKPKEIIKSTNSKNLEEAFIKL 243
>gb|AAB91597.1| (U09819) SpaF [Bacillus subtilis]
Length = 247
Score = 151 bits (378), Expect = 7e-36
Identities = 81/241 (33%), Positives = 143/241 (58%), Gaps = 13/241 (5%)
Query: 1 MIIVENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIV 60
++ ++L K+FG + + +S TV+ IYGLLGPNG+GKSTT++IL+GI+ G+++
Sbjct: 14 LLETKSLTKKFGKETAVADVSLTVQKNSIYGLLGPNGAGKSTTLKILTGILRKTSGEILF 73
Query: 61 GGVEVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAF 120
G + + LQ +G + E P LY++LT E + G+ +D R+ +++
Sbjct: 74 DGHKWKRSDLQT---IGSLIEAPPLYDNLTAFENVKVHATLLGLSED----RIHSVLKTV 126
Query: 121 EIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKE 180
+++ + G S G +Q++ + +LL+ PK+LILDE NGLDP + R+L+ F +
Sbjct: 127 DMQHAGKKRAGQFSMGMRQRLGIAIALLNHPKLLILDEPTNGLDPIGIQELRDLIRSFPQ 186
Query: 181 EGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKEERLEDVFLKLTQAKE 240
EG +++ S+H+L+ E I D +GII G + +G EI+K + LE +F+++ ++
Sbjct: 187 EGITVILSSHILSEVEQIADHIGIIIDGHLGYQG------EINKADDLEHLFMEVVKSTR 240
Query: 241 E 241
E
Sbjct: 241 E 241
>emb|CAB60255.1| (AJ250862) MrsF protein [Bacillus sp. HIL-Y85/54728]
Length = 303
Score = 151 bits (378), Expect = 7e-36
Identities = 77/224 (34%), Positives = 135/224 (59%), Gaps = 4/224 (1%)
Query: 1 MIIVENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIV 60
+++ +L K++ + G++ ++ GEIYG LGPNG+GK+TT+R+L G+I +G + +
Sbjct: 5 IVVTHDLTKKYKKHTSVDGLNLRIRRGEIYGFLGPNGAGKTTTIRMLLGLIKPTKGNIEI 64
Query: 61 GGVEVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAF 120
G + K+ LQ+ + +G + E+P Y +LT E V +RG+P E++V +++E
Sbjct: 65 FGQNLNKNRLQILQRIGSLVESPTYYGNLTGYENLEAVRRLRGLP----EQQVNEVLETV 120
Query: 121 EIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKE 180
+ K N+L S G KQ++ + +LL P +LILDE NGLDP + REL+ E +
Sbjct: 121 RLSKVANRLTKEYSLGMKQRLGIAVALLSSPDLLILDEPTNGLDPSGIQEIRELIKELPK 180
Query: 181 EGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISK 224
G S++ S+H+L+ + + +VGII G++I + ++ L + K
Sbjct: 181 SGMSVIVSSHLLSEIDQMATQVGIINNGKMIFQDSIASLHQKRK 224
>gb|AAC36155.1| (AF003632) PilH [Myxococcus xanthus]
Length = 326
Score = 151 bits (377), Expect = 9e-36
Identities = 76/205 (37%), Positives = 129/205 (62%), Gaps = 2/205 (0%)
Query: 15 EVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIVGGVEVAKDPLQVKR 74
+ L+G+ + G++YGLLGPNG+GKSTT++IL G++ EG+ ++ G D V+R
Sbjct: 33 KALQGLDLEIAPGQVYGLLGPNGAGKSTTIKILMGLVRASEGQALLFGEP--PDRPHVRR 90
Query: 75 IVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAFEIKKYMNQLIGTLS 134
VG++PE P+LYE LT EF + G + G+ L++RV +++ + + + I S
Sbjct: 91 QVGFLPENPSLYEYLTGREFVTLAGRIFGLSGHELDQRVERVLGDVGMGRASDLQIRRYS 150
Query: 135 FGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKEEGKSIVFSTHVLAL 194
G Q+ +L +L+ P++L+LDE +GLDP R R+L+ + +G +I+F TH+++
Sbjct: 151 KGMVQRTALAQALISGPRLLVLDEPTSGLDPLGRRQMRDLILAERAKGTTILFCTHIISD 210
Query: 195 AELICDRVGIIYQGRIIAEGTVEEL 219
E +CDRV ++ GR + EG+V++L
Sbjct: 211 VESLCDRVVVLVGGRRVQEGSVQDL 235
>dbj|BAB08166.1| (AB030831) SrtF [Streptococcus pyogenes]
Length = 229
Score = 150 bits (375), Expect = 2e-35
Identities = 80/232 (34%), Positives = 135/232 (57%), Gaps = 13/232 (5%)
Query: 1 MIIVENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIV 60
M+ ++NL+K +G + +L ++ + G++Y L+GPNG+GKST M+IL+G+++ G +I
Sbjct: 1 MLKIQNLKKSYGKRTILNNVNMNIPKGKVYALIGPNGAGKSTIMKILTGLVSKTSGSIIF 60
Query: 61 GGVEVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAF 120
G E ++ L R +G + E P LY++L+ + V + G+ E + L+
Sbjct: 61 EGREWSRRDL---RKIGSIIEEPPLYKNLSAYDNMKVVTTMLGVS----ESTILPLLNKV 113
Query: 121 EIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKE 180
+ + + S G KQ++ + SL++ PK+LILDE NGLDP + RE++ FK
Sbjct: 114 GLGNIDKRPVKQFSLGMKQRLGIAISLINSPKLLILDEPTNGLDPIGIQELREIIESFKS 173
Query: 181 EGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKEERLEDVF 232
EG +I+ S+H+L+ E + D +G IY+G+II E KE E LE++F
Sbjct: 174 EGMTIMISSHILSEVEHLADFIGFIYEGKIILE------KEYDGSENLEELF 219
>pir||T44443 gliding motility protein [imported] - Flavobacterium johnsoniae
>gi|2281663|gb|AAC19751.1| (AF007381) gliding motility
protein [Flavobacterium johnsoniae]
Length = 298
Score = 150 bits (375), Expect = 2e-35
Identities = 84/231 (36%), Positives = 134/231 (57%), Gaps = 5/231 (2%)
Query: 2 IIVENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIVG 61
I V ++ K +G ++ L ISF ++ GEI G LGPNG+GKST M+IL+ + G +V
Sbjct: 3 IEVNSISKSYGEQKALNEISFKIEKGEIVGFLGPNGAGKSTLMKILTTYLLADSGSALVN 62
Query: 62 GVEVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAFE 121
G +V + V++ +GY+PE LY L E+ +F V +PK R+ ++++
Sbjct: 63 GHDVMTNAKAVQQSIGYLPEHNPLYLDLYVREYLAFNADVYKVPK----SRIEEVIQLTG 118
Query: 122 IKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKEE 181
+ ++ I LS G +Q++ L ++LLH+P VLILDE GLDP R ++ ++
Sbjct: 119 LTPESHKKISQLSKGYRQRVGLANALLHNPDVLILDEPTTGLDPNQLMEIRNVIKNIGKD 178
Query: 182 GKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKEERLEDVF 232
K+I STH++ E ICDRV II +G+I+A+ ++ L KE+ +E F
Sbjct: 179 -KTIFLSTHIMQEVEAICDRVIIIDKGQIVADNKLDHLVAADKEQVIEVEF 228
>emb|CAB37661.1| (AJ224479) cdd4-like protein [Bacillus sphaericus]
Length = 311
Score = 149 bits (373), Expect = 3e-35
Identities = 74/225 (32%), Positives = 137/225 (60%), Gaps = 5/225 (2%)
Query: 1 MIIVENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIV 60
++ +NL K FG ++ + I+ ++ GEIYG LGPNG+GK+TT+R+L G++ G + +
Sbjct: 12 IVQTQNLSKNFGKEQAVSNINLQIRKGEIYGFLGPNGAGKTTTIRMLLGLMKPSSGTIKI 71
Query: 61 GGVEVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAF 120
++ KD +Q+ VG + E P+ Y LT E + + G+PK R+ ++++
Sbjct: 72 FQKDIVKDRIQILANVGSLVENPSYYPHLTAYENLEALRKILGVPK----TRIDEVLQTV 127
Query: 121 EIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEF-K 179
+K+ N+ + S G KQ++ + ++LLH+P++LILDE NGLDP R L+ K
Sbjct: 128 RLKEAANKKVKGFSLGMKQRLGIAAALLHNPELLILDEPTNGLDPSGIIEIRNLIKRLPK 187
Query: 180 EEGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISK 224
E G +I+ S+H+L+ + + +VGI+ +G +I + ++E +++ ++
Sbjct: 188 EYGMTIIISSHLLSEIDQMATQVGIVSKGTLIFQDSIEGMRKFAQ 232
>pir||S75436 hypothetical protein c05019 - Sulfolobus solfataricus
>gi|1707842|emb|CAA69520.1| (Y08257) putative ABC
transporter [Sulfolobus solfataricus]
Length = 246
Score = 147 bits (368), Expect = 1e-34
Identities = 87/242 (35%), Positives = 142/242 (57%), Gaps = 6/242 (2%)
Query: 1 MIIVENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIV 60
++ V++L K + KEVL+GISFTV GEI+ LLGPNG+GK+TT++ILS ++ G+V V
Sbjct: 5 IVEVKDLYKEYKDKEVLRGISFTVYKGEIFSLLGPNGAGKTTTVKILSCVLKPTRGEVKV 64
Query: 61 GGVEVAKDPLQVKRIVGYVPETPALYESLTPAEFFS-FVGGVRGIPKDILEERVRKLVEA 119
G +V + +++ +G +P+ + LT E FV G E +V +L+
Sbjct: 65 IGYKVPNECGKIRERIGVMPQDYQGFLDLTVRENIEYFVKLYNG-----KETQVDELISL 119
Query: 120 FEIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFK 179
+++K NQ + LS G +++ + S+ ++L LDE GLDPK+ R F E++ K
Sbjct: 120 LDLEKVKNQKLRYLSGGYVRRVGIASAFAGSQEILFLDEPTVGLDPKARRGFWEIIKMMK 179
Query: 180 EEGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKEERLEDVFLKLTQAK 239
+G +I +TH L A+ + DRV I+Y G++I T +E+ K LED +L+L ++
Sbjct: 180 NKGVTIFLTTHYLDEAQKLSDRVAILYGGKLIKVSTADEIMAEFKATNLEDAYLELIKSL 239
Query: 240 EE 241
E+
Sbjct: 240 ED 241
>gb|AAK40417.1| ABC transporter, ATP binding protein [Sulfolobus solfataricus]
Length = 246
Score = 147 bits (368), Expect = 1e-34
Identities = 87/242 (35%), Positives = 142/242 (57%), Gaps = 6/242 (2%)
Query: 1 MIIVENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIV 60
++ V++L K + KEVL+GISFTV GEI+ LLGPNG+GK+TT++ILS ++ G+V V
Sbjct: 5 IVEVKDLYKEYKDKEVLRGISFTVYKGEIFSLLGPNGAGKTTTVKILSCVLKPTRGEVKV 64
Query: 61 GGVEVAKDPLQVKRIVGYVPETPALYESLTPAEFFS-FVGGVRGIPKDILEERVRKLVEA 119
G +V + +++ +G +P+ + LT E FV G E +V +L+
Sbjct: 65 IGYKVPNECGKIRERIGVMPQDYQGFLDLTVRENIEYFVKLYNG-----KETQVDELISL 119
Query: 120 FEIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFK 179
+++K NQ + LS G +++ + S+ ++L LDE GLDPK+ R F E++ K
Sbjct: 120 LDLEKVKNQKLRYLSGGYVRRVGIASAFAGSQEILFLDEPTVGLDPKARRGFWEIIKMMK 179
Query: 180 EEGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKEERLEDVFLKLTQAK 239
+G +I +TH L A+ + DRV I+Y G++I T +E+ K LED +L+L ++
Sbjct: 180 NKGVTIFLTTHYLDEAQKLSDRVAILYGGKLIKVSTADEIMAEFKATNLEDAYLELIKSL 239
Query: 240 EE 241
E+
Sbjct: 240 ED 241
>pir||H70610 probable ABC-typetransmembrane transport portein - Mycobacterium
tuberculosis (strain H37RV) >gi|3261727|emb|CAB07840.1|
(Z93777) hypothetical protein Rv1218c [Mycobacterium
tuberculosis]
Length = 311
Score = 146 bits (366), Expect = 2e-34
Identities = 80/223 (35%), Positives = 130/223 (57%), Gaps = 5/223 (2%)
Query: 2 IIVENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIVG 61
I + L K FG L G+ TV++GE++G LGPNG+GKSTT+RIL G++ G V +
Sbjct: 10 IEIRGLTKHFGSVRALDGLDLTVREGEVHGFLGPNGAGKSTTLRILLGLVKADGGSVRLL 69
Query: 62 GVEVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAFE 121
G + D + + R + YVP L+ SLT E + +RG I R +L+E F
Sbjct: 70 GGDPWTDAVDLHRHIAYVPGDVTLWPSLTGGETIDLLARMRG---GIDNARRAELIERFG 126
Query: 122 IKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKEE 181
+ + T S G +QK+SLIS+L +L+LDE +GLDP +F++ + E ++
Sbjct: 127 LDP--TKKARTYSKGNRQKVSLISALSSHATLLLLDEPSSGLDPLMENVFQQCIGEARQR 184
Query: 182 GKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISK 224
G +++ S+H+LA E +C++V II G+ + G+++ L+ +S+
Sbjct: 185 GVTVLLSSHILAETEALCEKVTIIRAGKTVESGSLDALRHLSR 227
>dbj|BAB07698.1| (AP001520) ABC transporter (ATP-binding protein) [Bacillus
halodurans]
Length = 257
Score = 146 bits (366), Expect = 2e-34
Identities = 86/249 (34%), Positives = 134/249 (53%), Gaps = 11/249 (4%)
Query: 2 IIVENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIVG 61
I V+ L+K F K+VLKG+ F V+ GEI+ LLG NG+GK+TT+ ILS ++ EG+ +
Sbjct: 6 ISVKRLKKSFKNKDVLKGVDFAVQRGEIFALLGSNGAGKTTTVNILSTLLKPDEGEASIC 65
Query: 62 GVEVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAFE 121
G +V + P V++ + + AL LT E + +RG+P + L+ F
Sbjct: 66 GFDVQRQPDHVRQSISLTGQFAALDGMLTGRENLMIIAKLRGVPNP--SQVADHLLARFS 123
Query: 122 IKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKEE 181
+ N+ S G K+++ + SL+ P V+ LDE GLDP+ + + E
Sbjct: 124 LTDAANRRADQYSGGMKRRLDIAMSLIGKPAVIFLDEPTTGLDPEGRIEVWDAVKELAGG 183
Query: 182 GKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKE---------ISKEERLEDVF 232
G +I+ +T L AE + DR+ I++ G+II GT+ ELKE + K+ LED+F
Sbjct: 184 GTTILLTTQYLEEAEQLADRIAILHDGKIITTGTLAELKEMFPPAKVEYVEKQPTLEDIF 243
Query: 233 LKLTQAKEE 241
L + KEE
Sbjct: 244 LAIIGKKEE 252
>gb|AAC62423.1| (AF084104) NatA [Bacillus firmus]
Length = 299
Score = 146 bits (364), Expect = 3e-34
Identities = 73/217 (33%), Positives = 129/217 (58%), Gaps = 3/217 (1%)
Query: 4 VENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIVGGV 63
+ N+ KRFG + +S + GE++G+LG NG+GK+TT R++ G++ EG++ G
Sbjct: 5 INNITKRFGQSVAVDQLSLEIPSGEMFGMLGANGAGKTTTFRMMLGLLEPTEGEMTWKGE 64
Query: 64 EVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAFEIK 123
++ V +GY+PE LY L + ++G ++G+ K + +R +E F++
Sbjct: 65 KIDYSRTNV---IGYLPEERGLYPKLKVRDQLIYLGRLKGMHKKDIIPEMRMWLERFKVT 121
Query: 124 KYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKEEGK 183
Y + I LS G +QKI I+S++H P++LILDE +GLDP +A + +E + + K++G
Sbjct: 122 DYETKRIEELSKGNQQKIQFIASVIHRPELLILDEPFSGLDPVNAELLKEAVIDLKKKGT 181
Query: 184 SIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELK 220
+IVFS+H + E +C + I+ G + +G + E+K
Sbjct: 182 TIVFSSHRMDHVEELCQHLCILRHGTPVVKGELREIK 218
>pir||T36523 probable ABC-type transport system ATP-binding protein -
Streptomyces coelicolor >gi|4753857|emb|CAB42020.1|
(AL049754) putative ABC transporter ATP-binding protein
[Streptomyces coelicolor A3(2)]
Length = 311
Score = 146 bits (364), Expect = 3e-34
Identities = 79/223 (35%), Positives = 128/223 (56%), Gaps = 5/223 (2%)
Query: 2 IIVENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIVG 61
I V L K FG L G+ V+ GE++G LGPNG+GKSTT+R+L G++ G V
Sbjct: 5 ISVSGLHKSFGRTHALDGLDLEVETGEVHGFLGPNGAGKSTTIRVLLGLLRADAGAAQVL 64
Query: 62 GVEVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAFE 121
G + D ++ R + YVP L+ +L+ E G +RG + R +LVE FE
Sbjct: 65 GRDPWADAVEAHRRIAYVPGDVTLWRNLSGGEVIDLYGRLRG---GLDTRRRAELVERFE 121
Query: 122 IKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKEE 181
+ T S G +QK++L+++ D +LILDE +GLDP +F+ + E +E
Sbjct: 122 LDPTKKGR--TYSKGNRQKVALVAAFASDVDLLILDEPTSGLDPLMEEVFQRCVEEERER 179
Query: 182 GKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISK 224
G++++ S+H+L+ E +CDRV II +GR + G++ +L+ +++
Sbjct: 180 GRTVLLSSHILSEVEELCDRVSIIRKGRTVESGSLADLRHLTR 222
>dbj|BAB04885.1| (AP001511) ABC transporter (ATP-binding protein) [Bacillus
halodurans]
Length = 299
Score = 145 bits (363), Expect = 4e-34
Identities = 75/251 (29%), Positives = 145/251 (56%), Gaps = 10/251 (3%)
Query: 2 IIVENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIVG 61
+ ++ + K+FG + + +V GE++G+LG NG+GK+TT R++ G++ EG +
Sbjct: 3 LTIDGVTKKFGTFTAVNNLHVSVPKGEMFGMLGANGAGKTTTFRMILGLLEPTEGTI--- 59
Query: 62 GVEVAKDPLQVKRI--VGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEA 119
+ PL + +GY+PE LY LT + ++G ++G+ +++ ++ +E
Sbjct: 60 --HWREQPLTYNQTNCIGYLPEERGLYPKLTVKDQLKYLGRLKGMKTQDIQKEMKMWLER 117
Query: 120 FEIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFK 179
FE+ +Y ++ + LS G +QKI I+S+LH P++LILDE +GLDP + + ++ + + K
Sbjct: 118 FEVPEYEHKRVEQLSKGNQQKIQFIASVLHRPELLILDEPFSGLDPVNVELLKKAVIDLK 177
Query: 180 EEGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKEERLEDVFLKLTQAK 239
+EG +I+FS+H + E +C + I+++G + EG LK I + ++V ++ A
Sbjct: 178 KEGTTILFSSHRMEHVEELCQHLCILHRGSPVVEG---NLKNIKRSFGKKNVIIQGEFAL 234
Query: 240 EEIAQVVSALK 250
E + + L+
Sbjct: 235 EPLVDIPGVLR 245
>emb|CAC11986.1| (AL445065) ABC transporter cdd4-like protein ScnF related protein
[Thermoplasma acidophilum]
Length = 297
Score = 145 bits (363), Expect = 4e-34
Identities = 81/234 (34%), Positives = 131/234 (55%), Gaps = 1/234 (0%)
Query: 2 IIVENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIVG 61
I V N+ KR+G L +SF V LLGPNG+GK+T M+I++ II EG V +
Sbjct: 4 ISVSNVSKRYGDLMALNRVSFNVNGTGCLVLLGPNGAGKTTLMKIMTNIIRPSEGNVSIN 63
Query: 62 GVEVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAFE 121
G V ++P + VG + E P Y +T E F +RGI K+ V+++
Sbjct: 64 GFNVRENPGKALETVGSLIEQPEFYPYITGYEALMFTCRIRGISKEKCISEVQRVSTLTH 123
Query: 122 IKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKEE 181
+ Y+N+ S G KQ++ L ++L+ DP ++ILDE GLDP R+++ + K+E
Sbjct: 124 CRDYLNRKTKEYSRGMKQRVGLATALIGDPSIIILDEPTFGLDPNGMMEIRDIIMKMKKE 183
Query: 182 GKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKEERLEDVFLKL 235
K IV STH+++ AEL+ D +GII GR++ G VE+ + + + ++ + + +
Sbjct: 184 -KLIVLSTHLISEAELLADYIGIIDHGRLMHFGPVEKQRYLEVKGQINEAHVNV 236
>dbj|BAB07612.1| (AP001520) ABC transporter (ATP-binding protein) [Bacillus
halodurans]
Length = 282
Score = 144 bits (360), Expect = 9e-34
Identities = 81/223 (36%), Positives = 130/223 (57%), Gaps = 9/223 (4%)
Query: 1 MIIVENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIV 60
+I V++LRK F GKE LK +SF++K GE +G LGP+G+GK+TT++IL+G + F+G+V +
Sbjct: 4 VIEVKHLRKTFDGKEALKDVSFSIKRGETFGFLGPSGAGKTTTIKILTGQVRSFDGEVAL 63
Query: 61 GGVEVAKDPLQVKRI---VGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLV 117
G V + L+ K +G + + LYE LT + S + +P E R+ ++
Sbjct: 64 FGKPVHR--LKRKTFMSQIGVLTDNSGLYERLTVQDNLSMYCKLYSVP----ERRIHDVL 117
Query: 118 EAFEIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYE 177
++ +++ LS G KQ++ L ++LH P +L LDE + LDP S+ + + L
Sbjct: 118 AEVGLRDERAKIVSKLSKGMKQRVILARAMLHKPDLLFLDEPTSALDPASSHMIHDSLRR 177
Query: 178 FKEEGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELK 220
EG +I +TH + AE ICDRV + QG+I T E+L+
Sbjct: 178 LNREGTTIFLTTHDMLEAEKICDRVAFLDQGKIRVMDTPEQLR 220
>pir||F82303 ABC transporter, ATP-binding protein VC0589 [imported] - Vibrio
cholerae (group O1 strain N16961)
>gi|9655020|gb|AAF93756.1| (AE004144) ABC transporter,
ATP-binding protein [Vibrio cholerae]
Length = 305
Score = 143 bits (357), Expect = 2e-33
Identities = 78/217 (35%), Positives = 125/217 (56%), Gaps = 1/217 (0%)
Query: 4 VENLRKRF-GGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIVGG 62
+E LRK + GG E LKGIS VK G+ Y LLGPNG+GKSTT+ I+S ++ GKV V G
Sbjct: 6 IEQLRKTYAGGFEALKGISLQVKKGDFYALLGPNGAGKSTTIGIISSLVNKTSGKVTVFG 65
Query: 63 VEVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAFEI 122
++ K+ +G VP+ T + G G+PK + +ER +K + ++
Sbjct: 66 YDLDSQLELAKQKLGLVPQEFNFNPFETVEQIVLQQAGYYGVPKALAKERAKKYLTQLDL 125
Query: 123 KKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKEEG 182
+ ++ LS G K+++ + +L+H+P++LILDE G+D + R E L + +G
Sbjct: 126 WEKRSERARNLSGGMKRRLMIARALMHEPQLLILDEPTAGVDIELRRSMWEFLKQINAQG 185
Query: 183 KSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEEL 219
+I+ +TH L AE++C +GII +G +I T++ L
Sbjct: 186 VTIILTTHYLEEAEMLCRHIGIIQRGELIENTTMKSL 222
>sp|P72335|NODI_RHIS3 NODULATION ATP-BINDING PROTEIN I >gi|1531621|gb|AAB16898.1|
(U53327) NodI [Rhizobium sp. N33]
Length = 304
Score = 143 bits (356), Expect = 3e-33
Identities = 78/220 (35%), Positives = 125/220 (56%)
Query: 2 IIVENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIVG 61
I + ++K FG K V+ G+SFTV GE +GLLGPNG+GKST R+L G+ GK+ V
Sbjct: 6 IDLAGVKKSFGDKLVVNGLSFTVASGECFGLLGPNGAGKSTIARMLLGMTVPDAGKITVL 65
Query: 62 GVEVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAFE 121
G V ++ +G VP+ L + T E G G+ ++E + L+E
Sbjct: 66 GEPVGARSRLARKSIGVVPQFDNLDQEFTVRENLLVFGRYFGMSTRKIKEVIPSLLEFAR 125
Query: 122 IKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKEE 181
++ + +G LS G K++++L +L++DP++L++DE GLDP + + E L
Sbjct: 126 LESKADARVGELSGGMKRRLTLARALINDPQLLVMDEPTTGLDPHARHLIWERLRFLLAR 185
Query: 182 GKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKE 221
GK+I+ +TH + AE +CDR+ ++ GR +AEG+ L E
Sbjct: 186 GKTIILTTHFMEEAERLCDRLCVLEHGRKLAEGSPHALIE 225
>gb|AAF99566.1| (AF167161) unknown [Staphylococcus aureus]
Length = 309
Score = 143 bits (356), Expect = 3e-33
Identities = 78/242 (32%), Positives = 141/242 (58%), Gaps = 10/242 (4%)
Query: 1 MIIVENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIV 60
+I + NL K++G + + +S TV+ G+IYG LG NG+GK+TT+R+L G+I +G + +
Sbjct: 7 IIEINNLTKQYGSQIAVNNLSITVESGQIYGFLGRNGAGKTTTIRMLLGLIKPTKGNIKI 66
Query: 61 GGVEVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAF 120
E + ++ + +G + ETP Y +LT E + + GI K E + +++E
Sbjct: 67 FEKEFESNKTEILKNIGAMVETPGFYSNLTAKENLTINAKILGIQK---ENAIEEVLEIV 123
Query: 121 EIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKE 180
+ +L S G KQ++ + +LLH+P++LILDE NGLDP + R+L+ + +
Sbjct: 124 GLASEKVKLFKNYSLGMKQRLGIARALLHNPELLILDEPTNGLDPIGIKEIRKLIKDLAQ 183
Query: 181 EGK-SIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKEERLEDVFLKLTQAK 239
+I+ S+H+L+ E + D+VGII+ G ++ E E+LK+ +++ F+ ++ +
Sbjct: 184 SRNITILISSHILSEIEQLVDKVGIIHNGVLLEEIMYEDLKKKNRQ------FISISVSD 237
Query: 240 EE 241
EE
Sbjct: 238 EE 239
>sp|P22040|Y415_SYNY3 HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PROTEIN SLL0415
>gi|7445812|pir||S74323 ABC-type transport protein
sll0415 - Synechocystis sp. (strain PCC 6803)
>gi|1001104|dbj|BAA10241.1| (D64001) ABC transporter
[Synechocystis sp.]
Length = 354
Score = 142 bits (355), Expect = 3e-33
Identities = 75/207 (36%), Positives = 123/207 (59%), Gaps = 4/207 (1%)
Query: 15 EVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIVGGVEVAKDPLQVKR 74
E LK +S V+ GE +GLLGPNG+GK+T ++IL G+I G+ + G + Q K+
Sbjct: 68 ESLKPLSIAVQQGETFGLLGPNGAGKTTLLKILLGVIRASGGRGTLLGKPIGDR--QTKQ 125
Query: 75 IVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAFEI--KKYMNQLIGT 132
VGY+PE Y+ LT EF ++G + I K + R+ + + + K + +
Sbjct: 126 RVGYLPENAYFYDFLTAWEFLDYIGSLFQIGKQERQRRILAMCDLVGLAQKTAKKKQLRQ 185
Query: 133 LSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKEEGKSIVFSTHVL 192
S G Q++ + +L++DP+V+ LDE M+GLDP RE++ KE+GK+I F++H+L
Sbjct: 186 YSKGMLQRVGMAQALINDPEVVFLDEPMSGLDPLGRYQVREIILSLKEQGKTIFFNSHIL 245
Query: 193 ALAELICDRVGIIYQGRIIAEGTVEEL 219
A E ICDR+ I+ +G ++ G++ E+
Sbjct: 246 ADVEQICDRIAILARGELLCSGSLAEV 272
>gi|11498611 ABC transporter, ATP-binding protein [Archaeoglobus fulgidus]
>gi|7445743|pir||F69375 ABC transporter, ATP-binding
protein homolog - Archaeoglobus fulgidus
>gi|2649585|gb|AAB90232.1| (AE001034) ABC transporter,
ATP-binding protein [Archaeoglobus fulgidus]
Length = 285
Score = 142 bits (355), Expect = 3e-33
Identities = 83/225 (36%), Positives = 132/225 (57%), Gaps = 16/225 (7%)
Query: 4 VENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIVGGV 63
+ NL RFG +KG++ V+ GEI GLLGPNGSGK+TT+R + G++ +EG++
Sbjct: 6 ISNLSVRFGDFYAVKGLTLNVRRGEILGLLGPNGSGKTTTIRAIFGMVP-YEGEI----- 59
Query: 64 EVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAFEIK 123
VG++P+ LY +L+ E F + GI E RV ++++ +++
Sbjct: 60 ------RNYATSVGWMPQNSPLYLNLSVEENLRFFASLYGIED---ERRVEEMLKLVQLE 110
Query: 124 KYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKEEGK 183
+Y +L+ LS G +Q+ L ++LHDP++L+LDE G+DP F E + +EEGK
Sbjct: 111 RYRKRLVKNLSGGMRQRAMLACAMLHDPELLVLDEPTAGVDPPLRVSFWEQFEKLREEGK 170
Query: 184 SIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKEERL 228
+I+ +TH + AE C+R+ +I G IAEGT EE+K + +RL
Sbjct: 171 TILVTTHYMDEAER-CERLVLIRNGSKIAEGTPEEIKRRACGDRL 214
>gb|AAF04137.1|AF191033_5 (AF191033) hypothetical ABC transporter [Mycobacterium smegmatis]
Length = 267
Score = 142 bits (355), Expect = 3e-33
Identities = 72/192 (37%), Positives = 115/192 (59%), Gaps = 3/192 (1%)
Query: 29 IYGLLGPNGSGKSTTMRILSGIITDFEGKVIVGGVEVAKDPLQVKRIVGYVPETPALYES 88
I+G +G NG+GKSTTMRI+ G++ G+V++G + L ++R +GY+PE LY
Sbjct: 1 IFGFVGSNGAGKSTTMRIILGVLAPDAGRVLIGEDVI---DLDLRRRIGYMPEERGLYPK 57
Query: 89 LTPAEFFSFVGGVRGIPKDILEERVRKLVEAFEIKKYMNQLIGTLSFGTKQKISLISSLL 148
+ E +F+ + G+ E R+ + + + LS G +Q++ L ++L+
Sbjct: 58 MKVGEQLTFLARLHGMETAEAAESARRWADRLGVGSRFGDDVADLSLGNQQRVQLAAALV 117
Query: 149 HDPKVLILDEAMNGLDPKSARIFRELLYEFKEEGKSIVFSTHVLALAELICDRVGIIYQG 208
HDP VL+LDE +GLDP + + ++L E EG ++FS+H L L + ICDRVGII +G
Sbjct: 118 HDPDVLVLDEPFSGLDPVAVDVMSDVLKEKAAEGIPVIFSSHQLDLVQRICDRVGIIARG 177
Query: 209 RIIAEGTVEELK 220
+ A GTVE+L+
Sbjct: 178 EMRALGTVEDLR 189
>dbj|BAB06933.1| (AP001518) ABC transporter (ATP-binding protein) [Bacillus
halodurans]
Length = 318
Score = 142 bits (355), Expect = 3e-33
Identities = 75/228 (32%), Positives = 128/228 (55%), Gaps = 2/228 (0%)
Query: 1 MIIVENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIV 60
+I + + KR+ + +S +++ GEI+GLLGPNG+GK+T++ ++ G+ G V V
Sbjct: 5 IIKLNEITKRYDDHYAVDHLSLSIRKGEIFGLLGPNGAGKTTSILMMLGLSEPTSGTVQV 64
Query: 61 GGVEVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAF 120
G++ K P++VKR VGY+P+ Y +T E + + GI K ER L+E
Sbjct: 65 AGIDSTKYPIEVKRKVGYLPDNVGFYPDMTGMENLLYTASLNGIQKIEAIERANTLLEKV 124
Query: 121 EIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKE 180
+ + + G S G KQ++ L L+ P+++ILDE G+DP+ R F L+ +
Sbjct: 125 GLTEAAKKKTGQYSRGMKQRLGLADVLMKGPEIIILDEPTLGIDPEGVRDFLHLIRNLNQ 184
Query: 181 -EGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEEL-KEISKEE 226
E +++ +H L + +CDRVGI G+++A G +++L K + K E
Sbjct: 185 NENLTVLLCSHHLHQVQQVCDRVGIFVDGKLLAYGDLDQLVKRLFKHE 232
>emb|CAC08414.1| (AL392178) putative ABC transport system ATP-binding protein
[Streptomyces coelicolor]
Length = 324
Score = 142 bits (355), Expect = 3e-33
Identities = 72/221 (32%), Positives = 124/221 (55%)
Query: 2 IIVENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIVG 61
I LRK +G K VL GI V +G ++ LLGPNG+GK+T ++ILS ++T G + VG
Sbjct: 6 ITANGLRKSYGDKTVLDGIDLAVPEGTVFSLLGPNGAGKTTAVKILSTLVTPDAGDIRVG 65
Query: 62 GVEVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAFE 121
G ++A P V+ +G + A+ +T E + + +P+ +L+E F+
Sbjct: 66 GHDLASAPQAVRGAIGVTGQFSAVDGLITGEENMLLMADLHHLPRPEGRRVAAELLERFD 125
Query: 122 IKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKEE 181
+ + + T S G K+++ + +L+ DP+++ LDE GLDP+S +++ +
Sbjct: 126 LTEAAGKPASTYSGGMKRRLDIAMTLVGDPRIIFLDEPTTGLDPRSRHTMWQIIRALVTD 185
Query: 182 GKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEI 222
G ++ +T L A+ + DR+ +++ GRI AEGT EELK +
Sbjct: 186 GVTVFLTTQYLEEADELADRIAVLHDGRIAAEGTAEELKRL 226
>gb|AAD16030.1| (AF082183) ABC transporter MutF [Streptococcus mutans]
Length = 302
Score = 142 bits (354), Expect = 4e-33
Identities = 82/247 (33%), Positives = 143/247 (57%), Gaps = 11/247 (4%)
Query: 1 MIIVENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIV 60
++ + NL K FG ++VL ++ T+ GEIYG LG NG+GKST M+I+ G++ G+++
Sbjct: 5 LLSINNLSKSFGNQKVLDHLNMTISPGEIYGFLGVNGAGKSTAMKIILGLLPKDSGEIVA 64
Query: 61 GGVEVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAF 120
G + ++ Q+ +G + E PA Y +LT E + + +PKD ++ ++EA
Sbjct: 65 LGRPLPENRSQILPEIGALIEEPAFYPNLTGFENLQLIQELANLPKD----NIKVVMEAT 120
Query: 121 EIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKE 180
I ++L+ S G KQ++ + +L+ PK LILDE NGLDP R+L+ +
Sbjct: 121 GIYYAKDKLVRNYSLGMKQRLGISMALIKFPKFLILDEPTNGLDPDGIHQMRQLIRSLPQ 180
Query: 181 E-GKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKEERLEDVFLKLTQAK 239
+ +I+ S+H+L+ E + D VGII G +I EG + +L +++E++ + LK+
Sbjct: 181 KFNMTILISSHILSEIENLADTVGIIKDGHLIYEGGINQL--LNQEQKYQ---LKVNNL- 234
Query: 240 EEIAQVV 246
E+ AQ++
Sbjct: 235 EKAAQII 241
>emb|CAB93668.1| (AJ276653) RumF protein [Ruminococcus gnavus]
Length = 248
Score = 142 bits (354), Expect = 4e-33
Identities = 78/243 (32%), Positives = 135/243 (55%), Gaps = 10/243 (4%)
Query: 1 MIIVENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIV 60
+I E L K++ + +S +K G IYG LGPNG+GKSTTM++L G+ G +
Sbjct: 4 IITTEKLTKKYKNFTSVNKVSLHIKKGSIYGFLGPNGAGKSTTMKMLLGLTAPTSGSFQI 63
Query: 61 GGVEVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAF 120
G + D L + + +G E P+ Y +LT E + + G+P++ +E+ ++
Sbjct: 64 DGKQFPNDRLTILKRIGSFIEAPSFYANLTGRENLDIIRRILGLPQNAVED----ALDLV 119
Query: 121 EIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKE 180
+ ++ ++L S G KQ++ L +LL P +LILDE NGLDP R L+
Sbjct: 120 GLSQFGDRLAKKYSLGMKQRLGLAGALLGRPPILILDEPTNGLDPSGIHEIRNLIKSLPT 179
Query: 181 -EGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKE-----ERLEDVFLK 234
+++ S+H+L+ ELI D +GI+ GR++ EG++++LK+ + + + LED+FL
Sbjct: 180 FYDCTVLISSHMLSEIELIADDIGILNHGRMLFEGSLDDLKQTALQSGFATDNLEDMFLS 239
Query: 235 LTQ 237
+ +
Sbjct: 240 MIE 242
>emb|CAC11998.1| (AL445065) ABC transporter related protein [Thermoplasma
acidophilum]
Length = 334
Score = 141 bits (353), Expect = 6e-33
Identities = 77/241 (31%), Positives = 138/241 (56%), Gaps = 2/241 (0%)
Query: 1 MIIVENLRKRF-GGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVI 59
+I ENL K + GG + + G++ +++ EIYGLLG NG+GK+TT+++L+ I G I
Sbjct: 8 IIKTENLTKIYPGGIKAVDGLNIEIEEAEIYGLLGKNGAGKTTTIKMLTTAIDPTSGNAI 67
Query: 60 VGGVEVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEA 119
+GG ++ KD +++RI+G VP+ L E + IPK E+R++ L+E
Sbjct: 68 IGGYDLRKDKEKIRRIIGVVPQDLTTDADLKGVENLRMIASFYNIPKQEAEQRIKDLLEI 127
Query: 120 FEIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKS-ARIFRELLYEF 178
++ + N+ + S G ++++ LI L++ PK+L LDE GLD + +++++ +
Sbjct: 128 VDLSDWGNKYVSQYSGGMRKRLELICGLVNSPKILFLDEPTLGLDVNTRSKMWKYIRDIQ 187
Query: 179 KEEGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKEERLEDVFLKLTQA 238
KE G +I+ ++H L + + DR+ II G+I+ GT + LK K + + F + A
Sbjct: 188 KELGVTIILTSHYLEEVDQLADRISIIDHGKILITGTPDSLKASLKGDVITMEFNSMEDA 247
Query: 239 K 239
+
Sbjct: 248 E 248
>pir||S47705 hypothetical protein f648 - Escherichia coli
>gi|912462|gb|AAB18461.1| (U00039) No definition line
found [Escherichia coli]
Length = 648
Score = 141 bits (352), Expect = 8e-33
Identities = 79/237 (33%), Positives = 135/237 (56%), Gaps = 2/237 (0%)
Query: 2 IIVENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIVG 61
I +L RFG + ++F + GEI+G LG NG GKSTTM++L+G++ EG+ +
Sbjct: 14 IEARDLTMRFGSFVAVDHVNFRIPRGEIFGFLGSNGCGKSTTMKMLTGLLPASEGEAWLF 73
Query: 62 GVEVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAFE 121
G V + +R VGY+ + +LY LT + + IP+ + RV ++ E F+
Sbjct: 74 GQPVDPKDIDTRRRVGYMSQAFSLYNELTVRQNLELHARLFHIPEAEIPARVAEMSERFK 133
Query: 122 IKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKEE 181
+ + L +L G +Q++SL +++H P++LILDE +G+DP + +F +L+ + +
Sbjct: 134 LNDVEDILPESLPLGIRQRLSLAVAVIHRPEMLILDEPTSGVDPVARDMFWQLMVDLSRQ 193
Query: 182 GKSIVF-STHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKEERLEDVFLKLTQ 237
K +F STH + AE CDR+ +++ G+++A GT +EL E LE+ F+ Q
Sbjct: 194 DKVTIFISTHFMNEAER-CDRISLMHAGKVLASGTPQELVEKRGAASLEEAFIAYLQ 249
>pir||C69819 ABC transporter (ATP-binding protein) homolog yhaQ - Bacillus
subtilis >gi|2226131|emb|CAA74424.1| (Y14078)
Hypothetical protein [Bacillus subtilis]
>gi|2633325|emb|CAB12829.1| (Z99109) similar to ABC
transporter (ATP-binding protein) [Bacillus subtilis]
Length = 298
Score = 141 bits (352), Expect = 8e-33
Identities = 74/247 (29%), Positives = 140/247 (55%), Gaps = 6/247 (2%)
Query: 1 MIIVENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIV 60
M+ ++++ K FG + + G+ + + +++GLLG NG+GK+TT R++ G+++ EG +
Sbjct: 1 MLTIDHVTKTFGDYKAVDGLDLDIPEQQMFGLLGANGAGKTTTFRMILGLLSITEGSISW 60
Query: 61 GGVEVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAF 120
G V + +GY+PE LY + + ++ ++G+ K + + +E F
Sbjct: 61 KGRPVN---YHISNKIGYLPEERGLYPKMKVRDQLVYLARLKGMEKREAVKELGTWLERF 117
Query: 121 EIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKE 180
I Y N+ + L+ G +QKI IS++LH P++LILDE +GLDP + + +E + K
Sbjct: 118 NITDYENKKVEELAKGNQQKIQFISAVLHKPELLILDEPFSGLDPVNVELLKEAVISLKN 177
Query: 181 EGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKEERL---EDVFLKLTQ 237
G SI+FS+H + E +C+ + I+ +G+ + +G ++E+K ++ + D L+ Q
Sbjct: 178 SGVSILFSSHRMEHVEELCENLCILQKGKPVVQGKLKEIKRSFGKKNVTIHSDDDLRFLQ 237
Query: 238 AKEEIAQ 244
+ E I Q
Sbjct: 238 SHEGILQ 244
>sp|P37624|YHIH_ECOLI HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PROTEIN YHIH
>gi|7430321|pir||A65146 probable ABC transporter yhiH -
Escherichia coli >gi|2367231|gb|AAC76511.1| (AE000424)
putative ATP-binding component of a transport system,
fragment 1 [Escherichia coli K12]
Length = 894
Score = 141 bits (352), Expect = 8e-33
Identities = 79/237 (33%), Positives = 135/237 (56%), Gaps = 2/237 (0%)
Query: 2 IIVENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIVG 61
I +L RFG + ++F + GEI+G LG NG GKSTTM++L+G++ EG+ +
Sbjct: 260 IEARDLTMRFGSFVAVDHVNFRIPRGEIFGFLGSNGCGKSTTMKMLTGLLPASEGEAWLF 319
Query: 62 GVEVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAFE 121
G V + +R VGY+ + +LY LT + + IP+ + RV ++ E F+
Sbjct: 320 GQPVDPKDIDTRRRVGYMSQAFSLYNELTVRQNLELHARLFHIPEAEIPARVAEMSERFK 379
Query: 122 IKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKEE 181
+ + L +L G +Q++SL +++H P++LILDE +G+DP + +F +L+ + +
Sbjct: 380 LNDVEDILPESLPLGIRQRLSLAVAVIHRPEMLILDEPTSGVDPVARDMFWQLMVDLSRQ 439
Query: 182 GKSIVF-STHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKEERLEDVFLKLTQ 237
K +F STH + AE CDR+ +++ G+++A GT +EL E LE+ F+ Q
Sbjct: 440 DKVTIFISTHFMNEAER-CDRISLMHAGKVLASGTPQELVEKRGAASLEEAFIAYLQ 495
Score = 103 bits (254), Expect = 2e-21
Identities = 72/248 (29%), Positives = 130/248 (52%), Gaps = 10/248 (4%)
Query: 7 LRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIVGGVEVA 66
+ + +G L I+ + + GL+GP+G GKS+ + ++SG +G V+V G ++
Sbjct: 1 MSQHYGKTVALNNITLDIPARCMVGLIGPDGVGKSSLLSLISGARVIEQGNVMVLGGDM- 59
Query: 67 KDPLQVKRIVGYVPETPA-----LYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAFE 121
+DP + + + P LY +L+ E F + G K E R+ +L+ +
Sbjct: 60 RDPKHRRDVCPRIAWMPQGLGKNLYHTLSVYENVDFFARLFGHDKAEREVRINELLTSTG 119
Query: 122 IKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEF--K 179
+ + ++ G LS G KQK+ L +L+HDP++LILDE G+DP S F +L+ +
Sbjct: 120 LAPFRDRPAGKLSGGMKQKLGLCCALIHDPELLILDEPTTGVDPLSRSQFWDLIDSIRQR 179
Query: 180 EEGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKEERLEDVFLK-LTQA 238
+ S++ +T + AE D + + G ++A G+ EEL++ ++ LE+ F+ L QA
Sbjct: 180 QSNMSVLVATAYMEEAERF-DWLVAMNAGEVLATGSAEELRQQTQSATLEEAFINLLPQA 238
Query: 239 KEEIAQVV 246
+ + Q V
Sbjct: 239 QRQAHQAV 246
>sp|P42332|BCRA_BACLI BACITRACIN TRANSPORT ATP-BINDING PROTEIN BCRA
>gi|7445603|pir||S77627 bacitracin transport protein
bcrA - Bacillus licheniformis >gi|437315|gb|AAA99504.1|
(L20573) TTG start codon [Bacillus licheniformis]
Length = 306
Score = 140 bits (349), Expect = 2e-32
Identities = 75/226 (33%), Positives = 132/226 (58%), Gaps = 4/226 (1%)
Query: 1 MIIVENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIV 60
+I +L K +G ++ + ++ VK G+IYG LG NG+GK+TT+R+L G+I G++ +
Sbjct: 4 IIKTTDLTKMYGSQKSVDHLNINVKQGDIYGFLGRNGAGKTTTIRMLLGLIKPTSGQIEI 63
Query: 61 GGVEVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAF 120
G K+ ++ R +G + E P Y +LT E + GI K + + +++E
Sbjct: 64 FGENFFKNKKEILRRIGSIVEVPGFYANLTARENLLINAKIIGIHK---KNAIDEVLEIV 120
Query: 121 EIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEF-K 179
++ +L+G S G KQ++ + +LLH P++LILDE NGLDP + R L++ K
Sbjct: 121 GLQHETKKLVGKFSLGMKQRLGIARALLHYPELLILDEPTNGLDPIGIKEMRRLIHSLAK 180
Query: 180 EEGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKE 225
E +I S+H+L+ E + D VGII++G+++ E + LK+ +++
Sbjct: 181 ERNITIFISSHILSEIEQLVDHVGIIHEGKLLEEIPFDHLKKRNRK 226
>pir||H72301 ABC transporter, ATP-binding protein - Thermotoga maritima (strain
MSB8) >gi|4981596|gb|AAD36131.1|AE001765_10 (AE001765)
ABC transporter, ATP-binding protein [Thermotoga
maritima]
Length = 236
Score = 140 bits (349), Expect = 2e-32
Identities = 76/231 (32%), Positives = 131/231 (55%), Gaps = 5/231 (2%)
Query: 5 ENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIVGGVE 64
ENL+KRFG + V+ G++ GEI GLLGPNG+GK+T ++ G++ GK+I V+
Sbjct: 7 ENLKKRFGRRYVVNGVNLEFHRGEIVGLLGPNGAGKTTIFNMILGVVVPTSGKIIFRDVD 66
Query: 65 VAKDPLQVKRIVG--YVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAFEI 122
+ K P+ + +G Y+ + +++ LT E V K+ E ++ +L+ F +
Sbjct: 67 ITKFPVYRRARLGITYLQQETSIFGGLTVRENIDLVLRFHEKDKEKRERKIEELLHEFHL 126
Query: 123 KKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKEEG 182
K NQ LS G K+K+ L + +P ++LDE +G+DPK+ + +++ E K++
Sbjct: 127 KHLENQPASFLSGGEKRKLELARMMCLNPAFILLDEPFSGIDPKTVKEIQKMTLELKQKN 186
Query: 183 KSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKEERLEDVFL 233
IV + H + I DR+ +IY+G I+AEG+ E + E +E + +V+L
Sbjct: 187 FGIVITDHNVDELVEIADRIYVIYKGEILAEGSPERILE---DETVREVYL 234
>pir||B75076 daunorubicin resistance ATP-binding protein drra PAB1703 -
Pyrococcus abyssi (strain Orsay)
>gi|5458423|emb|CAB49911.1| (AJ248286) DAUNORUBICIN
RESISTANCE ATP-BINDING PROTEIN DRRA [Pyrococcus abyssi]
Length = 314
Score = 140 bits (349), Expect = 2e-32
Identities = 81/250 (32%), Positives = 146/250 (58%), Gaps = 8/250 (3%)
Query: 4 VENLRKRF----GGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVI 59
V+++ K+F G + +SF+ GE+ G+LGPNG+GK+TT+R+++ I G+V+
Sbjct: 6 VKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSGEVL 65
Query: 60 VGGVEVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEA 119
V G++ K+PL+V++ + Y+ + P L L+ ++ + RG K ++ ++E
Sbjct: 66 VDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCEDILEL 125
Query: 120 FEIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYE-F 178
F +K + ++ LS G K+++ L +L D ++ LDE G+DP+S R EL+ E
Sbjct: 126 FGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIKEKL 185
Query: 179 KEEGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKE-ISKEER--LEDVFLKL 235
+++G +++ ++H L E + DRV I+ QG+I+AEG+ +ELK+ K R LE+
Sbjct: 186 EDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFGKTVRIVLEEPIKNF 245
Query: 236 TQAKEEIAQV 245
KEE+ +V
Sbjct: 246 ELLKEELLRV 255
>gi|11498898 ABC transporter, ATP-binding protein [Archaeoglobus fulgidus]
>gi|7445659|pir||C69412 ABC transporter, ATP-binding
protein homolog - Archaeoglobus fulgidus
>gi|2649279|gb|AAB89946.1| (AE001014) ABC transporter,
ATP-binding protein [Archaeoglobus fulgidus]
Length = 303
Score = 139 bits (348), Expect = 2e-32
Identities = 84/229 (36%), Positives = 134/229 (57%), Gaps = 17/229 (7%)
Query: 13 GKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIVGGVEVAKDPLQV 72
G L+GI ++DG I+GLLGPNG+GK+T + ILS I+ +G+V + G++ K+ +V
Sbjct: 20 GIVALRGIDLDIEDGVIFGLLGPNGAGKTTLISILSTILIPTKGEVRILGMDAFKNTRKV 79
Query: 73 KRIVGY-----VPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAFEIKKYMN 127
+ + +P +YE L F++ G+ V +++ FE++++ N
Sbjct: 80 RERINISSGVRMPWGMKVYECL---RFYAMCYGITD------RRVVDRVISEFELEEHRN 130
Query: 128 QLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKEE-GKSIV 186
+ LS G KQK +L + L+DP+V+ LDE LDP A+ R+++ KEE +IV
Sbjct: 131 KRFDDLSTGNKQKANLARAFLNDPEVVFLDEPTANLDPDMAKKIRQMILRIKEEKDVTIV 190
Query: 187 FSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKEERLEDVFLKL 235
+TH + AE++CDR+ I +G+I+AEGT EELK+ +K E V LKL
Sbjct: 191 LTTHNMREAEMLCDRIAFIKEGKIVAEGTSEELKKYTKMS--ERVILKL 237
>gb|AAD44229.1|AF143772_35 (AF143772) DrrA [Mycobacterium avium]
Length = 315
Score = 139 bits (348), Expect = 2e-32
Identities = 81/220 (36%), Positives = 125/220 (56%), Gaps = 1/220 (0%)
Query: 2 IIVENLRKRFGGKEV-LKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIV 60
I VE L K+FGG V L G+ F+V G + GLLG NG+GK+TT+ ILS +I G+ V
Sbjct: 6 IEVEGLTKKFGGSTVALAGVDFSVPAGTVCGLLGHNGAGKTTTINILSTLIRPTSGRASV 65
Query: 61 GGVEVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAF 120
G +V + P +V+ +G + L LT E +RG+ + + R +L+E F
Sbjct: 66 AGHDVVRRPAEVRASIGMAGQFTGLDPMLTGRENLVLFSRLRGLNRRRAKARADELLEQF 125
Query: 121 EIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKE 180
+ ++ + T S G +++ L S+L+ PKVL LDE GLDP+S R L+ +
Sbjct: 126 NLVDAADRRLSTYSGGMFRRVDLASALVVPPKVLFLDEPTTGLDPRSRRDVWALVSSLRV 185
Query: 181 EGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELK 220
+G +++ +T L A+++ D + +I GR+IA GT EELK
Sbjct: 186 QGITVLLTTQYLEEADVLSDSIVVIDHGRVIASGTSEELK 225
>gb|AAG20473.1| (AE005119) copper transport ATP-binding protein; NosF1
[Halobacterium sp. NRC-1]
Length = 304
Score = 139 bits (347), Expect = 3e-32
Identities = 73/220 (33%), Positives = 120/220 (54%), Gaps = 5/220 (2%)
Query: 2 IIVENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIVG 61
I + + KR+G L ++ TV +GEIYG LGPNG+GKST + IL + G +
Sbjct: 4 IELSGVSKRYGDVTALTDLNITVDEGEIYGFLGPNGAGKSTAINILLDFVRPTTGSATIL 63
Query: 62 GVEVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAFE 121
G + D +++ +G +PE ++Y+ LT + F + D L++
Sbjct: 64 GYDAQADSQAIRQRIGVLPEGFSVYDRLTARKHVEFAIDSKNATND-----PDALLDRVG 118
Query: 122 IKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKEE 181
I + ++ G S G +Q++ L +L+ DP++L+LDE +GLDP AR R +L E
Sbjct: 119 IPEAADRKAGGFSTGMRQRLGLAIALVGDPEMLLLDEPSSGLDPNGAREMRSILTEEANR 178
Query: 182 GKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKE 221
G ++ FS+H+L E ICD GI+ G ++AE +++ L+E
Sbjct: 179 GTTVFFSSHILGQVEAICDHAGILQNGTLVAEDSIDALRE 218
>pir||G82993 probable ATP-binding/permease fusion ABC transporter PA5231
[imported] - Pseudomonas aeruginosa (strain PAO1)
>gi|9951539|gb|AAG08616.1|AE004935_13 (AE004935)
probable ATP-binding/permease fusion ABC transporter
[Pseudomonas aeruginosa]
Length = 916
Score = 138 bits (345), Expect = 5e-32
Identities = 78/233 (33%), Positives = 133/233 (56%), Gaps = 2/233 (0%)
Query: 2 IIVENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIVG 61
I E L RFG + +SF ++ GEI+G LG NG GKSTTM++L+G++ EG +
Sbjct: 275 IEAEGLTCRFGDFVAVDHVSFRIERGEIFGFLGSNGCGKSTTMKMLTGLLPASEGTCALF 334
Query: 62 GVEVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAFE 121
G V + +R VGY+ + +LY L+ + + +P D + RV +++ F+
Sbjct: 335 GQPVDASDMATRRRVGYMSQAFSLYAELSVRQNLVLHARLFHLPADGIPARVGEMLRRFD 394
Query: 122 IKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEF-KE 180
++K ++L L G +Q++SL +++H P++LILDE +G+DP + F EL+ E +
Sbjct: 395 LEKVADELPNDLPLGIRQRLSLAVAVIHKPEILILDEPTSGVDPVARDGFWELMVELSRR 454
Query: 181 EGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKEERLEDVFL 233
+G +I STH + A+ CDR+ +++ G+++A T +EL LE F+
Sbjct: 455 DGVTIFISTHFMNEAQR-CDRISLMHAGKVLASDTPDELVRQRGLPTLEATFI 506
Score = 109 bits (271), Expect = 2e-23
Identities = 73/232 (31%), Positives = 123/232 (52%), Gaps = 7/232 (3%)
Query: 10 RFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGI--ITDFEGKVIVGGVEVAK 67
R+G + +S + + GL+GP+G GKS+ + +L+G + D E +V+ G + +
Sbjct: 17 RYGETRAVDDVSLEIPANRMVGLIGPDGVGKSSLLALLAGARKMQDGEIRVLDGDMRDRR 76
Query: 68 DPLQVKRIVGYVPETPA--LYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAFEIKKY 125
V + Y+P+ LY +L+ E F G + G K E R+ L+++ + +
Sbjct: 77 HRRAVCPRIAYMPQGLGKNLYPTLSVFENVDFFGRLFGHDKAERERRIADLLQSTGLAPF 136
Query: 126 MNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFK--EEGK 183
+ G LS G KQK+ L +L+HDP +LILDE G+DP S F EL+ + EG
Sbjct: 137 AERPAGKLSGGMKQKLGLCCALIHDPDLLILDEPTTGVDPLSRNQFWELIGRIRAGREGM 196
Query: 184 SIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKEERLEDVFLKL 235
S++ +T + AE D + + G+++A GT +EL+E + + LE F+ L
Sbjct: 197 SVLVATAYMEEAERF-DWLVAMDDGKVLATGTPQELRERTGTQSLESAFIAL 247
>dbj|BAB16596.1| (AB037937) ABC2 [Rattus norvegicus]
Length = 2434
Score = 138 bits (345), Expect = 5e-32
Identities = 78/249 (31%), Positives = 138/249 (55%), Gaps = 5/249 (2%)
Query: 1 MIIVENLRKRFGGKEV-----LKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFE 55
M+ +ENL K + +++ + + V+ GE +GLLG NG+GK++T ++L+G +
Sbjct: 2050 MVKIENLTKVYKSRKIGRILAVDRLCLGVRPGECFGLLGVNGAGKTSTFKMLTGDESTTG 2109
Query: 56 GKVIVGGVEVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRK 115
G+ V G V KD LQV++ +GY P+ AL++ LT E +RGIP + VR
Sbjct: 2110 GEAFVNGHSVLKDLLQVQQSLGYCPQFDALFDELTAREHLQLYTRLRGIPWKDEAQVVRW 2169
Query: 116 LVEAFEIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELL 175
+E E+ K ++ G+ S G K+K+S +L+ P + LDE G+DPK+ R L+
Sbjct: 2170 ALEKLELTKCADKPAGSYSGGNKRKLSTAIALIGYPAFIFLDEPTTGMDPKARRFLWNLI 2229
Query: 176 YEFKEEGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKEERLEDVFLKL 235
+ + G+S+V ++H + E +C R+ I+ GR+ G+++ LK + + V K
Sbjct: 2230 LDLIKTGRSVVLTSHSMEECEAVCTRLAIMVNGRLRCLGSIQHLKNRFGDGYMITVRTKS 2289
Query: 236 TQAKEEIAQ 244
+Q +++ +
Sbjct: 2290 SQNVKDVVR 2298
Score = 113 bits (281), Expect = 2e-24
Identities = 63/222 (28%), Positives = 124/222 (55%), Gaps = 3/222 (1%)
Query: 1 MIIVENLRKRFGG--KEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKV 58
++ V+ L K + K L +S + + ++ LG NG+GK+TTM IL+G+ G
Sbjct: 989 VVCVDKLTKVYKNDKKLALNKLSLNLYENQVVSFLGHNGAGKTTTMSILTGLFPPTSGSA 1048
Query: 59 IVGGVEVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVE 118
+ G ++ + ++++ +G P+ L++ LT E F ++ + ++ + + + K++E
Sbjct: 1049 TIYGHDIRTEMDEIRKNLGMCPQHNVLFDQLTVEEHLWFYSRLKSMAQEEIRKEMDKMIE 1108
Query: 119 AFEIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEF 178
E+ + L+ TLS G K+K+S+ + + + +ILDE G+DP + R +L+ ++
Sbjct: 1109 DLELSNKRHSLVQTLSGGMKRKLSVAIAFVGGSRAIILDEPTAGVDPYARRAIWDLILKY 1168
Query: 179 KEEGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELK 220
K G++I+ STH + A+L+ DR+ II G++ G+ LK
Sbjct: 1169 K-PGRTILLSTHHMDEADLLGDRIAIISHGKLKCCGSPLFLK 1209
>pir||A59189 ATP-binding cassette transporter - human (fragment)
>gi|5689461|dbj|BAA83014.1| (AB028985) KIAA1062 protein
[Homo sapiens]
Length = 1529
Score = 138 bits (344), Expect = 7e-32
Identities = 77/249 (30%), Positives = 138/249 (54%), Gaps = 5/249 (2%)
Query: 1 MIIVENLRKRFGGKEV-----LKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFE 55
M+ +ENL K + +++ + + V+ GE +GLLG NG+GK++T ++L+G +
Sbjct: 1143 MVKIENLTKVYKSRKIGRILAVDRLCLGVRPGECFGLLGVNGAGKTSTFKMLTGDESTTG 1202
Query: 56 GKVIVGGVEVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRK 115
G+ V G V K+ LQV++ +GY P+ AL++ LT E +RGI V+
Sbjct: 1203 GEAFVNGHSVLKELLQVQQSLGYCPQCDALFDELTAREHLQLYTRLRGISWKDEARVVKW 1262
Query: 116 LVEAFEIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELL 175
+E E+ KY ++ GT S G K+K+S +L+ P + LDE G+DPK+ R L+
Sbjct: 1263 ALEKLELTKYADKPAGTYSGGNKRKLSTAIALIGYPAFIFLDEPTTGMDPKARRFLWNLI 1322
Query: 176 YEFKEEGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKEERLEDVFLKL 235
+ + G+S+V ++H + E +C R+ I+ GR+ G+++ LK + + V K
Sbjct: 1323 LDLIKTGRSVVLTSHSMEECEALCTRLAIMVNGRLRCLGSIQHLKNRFGDGYMITVRTKS 1382
Query: 236 TQAKEEIAQ 244
+Q+ +++ +
Sbjct: 1383 SQSVKDVVR 1391
Score = 112 bits (278), Expect = 4e-24
Identities = 63/222 (28%), Positives = 123/222 (55%), Gaps = 3/222 (1%)
Query: 1 MIIVENLRKRFGG--KEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKV 58
++ V+ L K + K L +S + + ++ LG NG+GK+TTM IL+G+ G
Sbjct: 83 VVCVDKLTKVYKDDKKLALNKLSLNLYENQVVSFLGHNGAGKTTTMSILTGLFPPTSGSA 142
Query: 59 IVGGVEVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVE 118
+ G ++ + ++++ +G P+ L++ LT E F ++ + ++ + + K++E
Sbjct: 143 TIYGHDIRTEMDEIRKNLGMCPQHNVLFDRLTVEEHLWFYSRLKSMAQEEIRREMDKMIE 202
Query: 119 AFEIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEF 178
E+ + L+ TLS G K+K+S+ + + + +ILDE G+DP + R +L+ ++
Sbjct: 203 DLELSNKRHSLVQTLSGGMKRKLSVAIAFVGGSRAIILDEPTAGVDPYARRAIWDLILKY 262
Query: 179 KEEGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELK 220
K G++I+ STH + A+L+ DR+ II G++ G+ LK
Sbjct: 263 K-PGRTILLSTHHMDEADLLGDRIAIISHGKLKCCGSPLFLK 303
>gb|AAG09372.1|AF178941_1 (AF178941) ATP-binding cassette sub-family A member 2 [Homo sapiens]
Length = 2436
Score = 138 bits (344), Expect = 7e-32
Identities = 77/249 (30%), Positives = 138/249 (54%), Gaps = 5/249 (2%)
Query: 1 MIIVENLRKRFGGKEV-----LKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFE 55
M+ +ENL K + +++ + + V+ GE +GLLG NG+GK++T ++L+G +
Sbjct: 2050 MVKIENLTKVYKSRKIGRILAVDRLCLGVRPGECFGLLGVNGAGKTSTFKMLTGDESTTG 2109
Query: 56 GKVIVGGVEVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRK 115
G+ V G V K+ LQV++ +GY P+ AL++ LT E +RGI V+
Sbjct: 2110 GEAFVNGHSVLKELLQVQQSLGYCPQCDALFDELTAREHLQLYTRLRGISWKDEARVVKW 2169
Query: 116 LVEAFEIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELL 175
+E E+ KY ++ GT S G K+K+S +L+ P + LDE G+DPK+ R L+
Sbjct: 2170 ALEKLELTKYADKPAGTYSGGNKRKLSTAIALIGYPAFIFLDEPTTGMDPKARRFLWNLI 2229
Query: 176 YEFKEEGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKEERLEDVFLKL 235
+ + G+S+V ++H + E +C R+ I+ GR+ G+++ LK + + V K
Sbjct: 2230 LDLIKTGRSVVLTSHSMEECEALCTRLAIMVNGRLRCLGSIQHLKNRFGDGYMITVRTKS 2289
Query: 236 TQAKEEIAQ 244
+Q+ +++ +
Sbjct: 2290 SQSVKDVVR 2298
Score = 112 bits (278), Expect = 4e-24
Identities = 63/222 (28%), Positives = 123/222 (55%), Gaps = 3/222 (1%)
Query: 1 MIIVENLRKRFGG--KEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKV 58
++ V+ L K + K L +S + + ++ LG NG+GK+TTM IL+G+ G
Sbjct: 990 VVCVDKLTKVYKDDKKLALNKLSLNLYENQVVSFLGHNGAGKTTTMSILTGLFPPTSGSA 1049
Query: 59 IVGGVEVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVE 118
+ G ++ + ++++ +G P+ L++ LT E F ++ + ++ + + K++E
Sbjct: 1050 TIYGHDIRTEMDEIRKNLGMCPQHNVLFDRLTVEEHLWFYSRLKSMAQEEIRREMDKMIE 1109
Query: 119 AFEIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEF 178
E+ + L+ TLS G K+K+S+ + + + +ILDE G+DP + R +L+ ++
Sbjct: 1110 DLELSNKRHSLVQTLSGGMKRKLSVAIAFVGGSRAIILDEPTAGVDPYARRAIWDLILKY 1169
Query: 179 KEEGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELK 220
K G++I+ STH + A+L+ DR+ II G++ G+ LK
Sbjct: 1170 K-PGRTILLSTHHMDEADLLGDRIAIISHGKLKCCGSPLFLK 1210
>gb|AAG32068.1|AF317790_1 (AF317790) ATP-binding transporter AviABCI [Streptomyces
viridochromogenes]
Length = 323
Score = 138 bits (344), Expect = 7e-32
Identities = 70/227 (30%), Positives = 128/227 (55%)
Query: 2 IIVENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIVG 61
++ E LRK +G + L G V +G + LLGPNG+GK+T +RILS ++ G+ +V
Sbjct: 9 LVAEGLRKTYGSETALDGFDLVVPEGTVCALLGPNGAGKTTAVRILSTLLKPDGGRALVA 68
Query: 62 GVEVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAFE 121
G++V ++ +V+R +G + PA+ E LT E G + + + + R +L+E F+
Sbjct: 69 GLDVTREAAEVRRNIGVTGQYPAVEEILTGRENLEMWGRLYHVGRREAQRRTEELLEQFD 128
Query: 122 IKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKEE 181
+ + ++ + S G ++++ L + PKVL LDE GLDP++ +++ E+
Sbjct: 129 LTEAADKRLKHYSGGMRRRLDLAAGFFTVPKVLFLDEPTTGLDPRNRNEVWKMVRSMVEQ 188
Query: 182 GKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKEERL 228
G +++ +T L A+ + D++ +I GR + EGT E LK + +R+
Sbjct: 189 GTTVLLTTQYLEEADRLADQISVIDAGRGVVEGTPETLKSLVGGDRI 235
>pir||S34187 probable ABC-type transport protein TnrB2 - Streptomyces
longisporoflavus >gi|581708|emb|CAA52012.1| (X73633)
start codon gtg [Streptomyces longisporoflavus]
Length = 300
Score = 138 bits (343), Expect = 9e-32
Identities = 74/218 (33%), Positives = 123/218 (55%), Gaps = 5/218 (2%)
Query: 7 LRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIVGGVEVA 66
L K FG L G+ V GE++G LGPNG+GKSTT+R+L G++ G
Sbjct: 4 LHKSFGRTHALDGLDLAVDSGEVHGFLGPNGAGKSTTIRVLLGLLRADSGAPSSSARTPW 63
Query: 67 KDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAFEIKKYM 126
KD + + R + YVP L+ +LT E + +RG + +R +L+E F++
Sbjct: 64 KDAVALHRRLAYVPGDVELWPNLTGGEAIDLLSRLRG---GLDRQRRDELIERFDLDPTK 120
Query: 127 NQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKEEGKSIV 186
S G +QK+ ++++L D ++L+LDE GLDP +F++++ K GK+++
Sbjct: 121 KGR--AYSKGNRQKVPIVAALASDAELLLLDEPTAGLDPLMEVVFQDVILRAKAAGKTVL 178
Query: 187 FSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISK 224
S+H+LA E +CDRV II +GR + GT+ E++ +++
Sbjct: 179 LSSHILAQVEKLCDRVSIIRKGRNVQSGTLTEMRHLTR 216
>pir||T31682 bcrA protein - Bacillus licheniformis >gi|4464278|gb|AAD21213.1|
(AF007865) BcrA [Bacillus licheniformis]
Length = 306
Score = 138 bits (343), Expect = 9e-32
Identities = 74/226 (32%), Positives = 131/226 (57%), Gaps = 4/226 (1%)
Query: 1 MIIVENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIV 60
+I +L K +G ++ + ++ VK G+IYG LG NG+GK+TT+R+L G+I G++ +
Sbjct: 4 IIKTTDLTKMYGSQKSVDHLNINVKQGDIYGFLGRNGAGKTTTIRMLLGLIKPTSGQIEI 63
Query: 61 GGVEVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAF 120
G K+ ++ R +G + E P Y +LT E + GI K + + +++E
Sbjct: 64 FGENFFKNKKEILRRIGSIVEVPGFYANLTARENLLINAKIIGIHK---KNAIDEVLEIV 120
Query: 121 EIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEF-K 179
++ +L+G S G KQ++ + +LLH P++ ILDE NGLDP + R L++ K
Sbjct: 121 GLQHETKKLVGKFSLGMKQRLGIARALLHYPELSILDEPTNGLDPIGIKEMRRLIHSLAK 180
Query: 180 EEGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKE 225
E +I S+H+L+ E + D VGII++G+++ E + LK+ +++
Sbjct: 181 ERNITIFISSHILSEIEQLVDHVGIIHEGKLLEEIPFDHLKKRNRK 226
>pir||F72742 probable transport ATP-binding protein APE0471 - Aeropyrum pernix
(strain K1) >gi|5104118|dbj|BAA79434.1| (AP000059) 356aa
long hypothetical transport ATP-binding protein
[Aeropyrum pernix]
Length = 356
Score = 138 bits (343), Expect = 9e-32
Identities = 82/225 (36%), Positives = 127/225 (56%), Gaps = 16/225 (7%)
Query: 1 MIIVENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIV 60
+I VE L KR+G E L+G+SF+V GE++G LGPNG+GK+TT+R+L G G V
Sbjct: 57 VIEVEGLVKRYGSVEALRGVSFSVLSGEVFGYLGPNGAGKTTTIRVLMGFSRPTSGSARV 116
Query: 61 GGVEVAKDPLQ-VKRIVGYVPETPALYESLTPAEFFSF----VGGV-RGIPKDILEERVR 114
GVE+ V+R VGYVP Y ++ + VGG RG+ VR
Sbjct: 117 FGVELYNPGASGVRRRVGYVPGEFEFYGGVSGGRMLDYWCRLVGGCSRGV--------VR 168
Query: 115 KLVEAFEIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFREL 174
+L+EAF + + + +GT S G KQ ++L+ + H+P ++++DE GLDP + +
Sbjct: 169 ELLEAFPLP--LERAVGTYSRGMKQMLALVMAFSHEPDLVVMDEPTTGLDPLARGRVLDF 226
Query: 175 LYEFKEEGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEEL 219
+ EG ++ FS+HVL+ + + DRVG++ G ++A V L
Sbjct: 227 VRSKAREGVTVFFSSHVLSEVQRVADRVGLLRSGVLVALEDVSSL 271
>pir||E72636 probable nodulation ATP-binding protein I APE1548 - Aeropyrum
pernix (strain K1) >gi|5105233|dbj|BAA80547.1|
(AP000061) 338aa long hypothetical nodulation
ATP-binding protein I [Aeropyrum pernix]
Length = 338
Score = 138 bits (343), Expect = 9e-32
Identities = 75/215 (34%), Positives = 131/215 (60%), Gaps = 4/215 (1%)
Query: 7 LRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIVGGVEVA 66
LRKRFGG+ + G+SF+V DGE ++GPNGSGK+T +R++SG++ G V V G +V
Sbjct: 48 LRKRFGGRTAVAGVSFSVGDGERACIMGPNGSGKTTLLRMVSGVLRPSGGSVRVCGYDVW 107
Query: 67 KDPLQVKR-IVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAFEIKKY 125
D + R ++G+ P+ P + +T AE+ + VGG+ G+ + R+++E +
Sbjct: 108 GDGWREARGLIGFAPQDPPMARRMTGAEYITVVGGLLGLSPGVARREARRVLEMLGFEDV 167
Query: 126 MNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSAR-IFRELLYEFKEEGKS 184
+ +++ LS G ++ + + +L +P+V++LDE +GLD ++ ++ L FK G++
Sbjct: 168 LGRVVARLSGGQRRALGIALALASNPEVVVLDEPGSGLDVRARESLWASLRKAFK--GRT 225
Query: 185 IVFSTHVLALAELICDRVGIIYQGRIIAEGTVEEL 219
++FS+H AE DRV I+++GR+ A G EL
Sbjct: 226 VLFSSHDPQEAEAESDRVLIMHRGRLAAWGKPREL 260
>pir||D70984 probable drrA protein - Mycobacterium tuberculosis (strain H37RV)
>gi|1781083|emb|CAB06095.1| (Z83857) drrA [Mycobacterium
tuberculosis]
Length = 331
Score = 137 bits (342), Expect = 1e-31
Identities = 85/252 (33%), Positives = 137/252 (53%), Gaps = 2/252 (0%)
Query: 2 IIVENLRKRFG-GKEV-LKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVI 59
++V +RK +G GK V L +SF V+ GE+ GLLGPNG+GK+T + ILS + G I
Sbjct: 8 VVVNGVRKTYGKGKIVALDDVSFKVRRGEVIGLLGPNGAGKTTMVDILSTLTRPDAGSAI 67
Query: 60 VGGVEVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEA 119
+ G +V +P V+R + + A+ ++L+ + G + G+ K +R +L+E
Sbjct: 68 IAGYDVVSEPAGVRRSIMVTGQQVAVDDALSGEQNLVLFGRLWGLSKSAARKRAAELLEQ 127
Query: 120 FEIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFK 179
F + + +GT S G +++I + L+ P+V LDE GLDP+S + +L+ FK
Sbjct: 128 FSLVHAGKRRVGTYSGGMRRRIDIACGLVVQPQVAFLDEPTTGLDPRSRQAIWDLVASFK 187
Query: 180 EEGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKEERLEDVFLKLTQAK 239
+ G + + +T L A+ + DR+ +I G IIAEGT ELK + + E V L
Sbjct: 188 KLGIATLLTTQYLEEADALSDRIILIDHGIIIAEGTANELKHRAGDTFCEIVPRDLKDLD 247
Query: 240 EEIAQVVSALKE 251
+A + S L E
Sbjct: 248 AIVAALGSLLPE 259
>pir||T36316 probable ABC-type transport system ATP-binding protein -
Streptomyces coelicolor >gi|4490633|emb|CAB38595.1|
(AL035654) putative ABC transporter ATP-binding protein
[Streptomyces coelicolor A3(2)]
Length = 317
Score = 137 bits (342), Expect = 1e-31
Identities = 77/221 (34%), Positives = 127/221 (56%), Gaps = 9/221 (4%)
Query: 1 MIIVENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIV 60
MI ++ L KR+G K + +SF + G++ G LGPNG+GKSTTMR++ G+ G+ +V
Sbjct: 1 MITLDRLTKRYGDKTAVSDLSFEINPGKVTGFLGPNGAGKSTTMRMIVGLDAPTSGRALV 60
Query: 61 GG--VEVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVE 118
GG E + PL R VG + + A + + + GIP RV ++++
Sbjct: 61 GGKRYEELRHPL---REVGALLDARAGHPGRSARHHLLGLARSNGIPAS----RVGEVLQ 113
Query: 119 AFEIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEF 178
+ + N+ IG+ S G Q++ + ++LL DPKVL+ DE +NGLDP R REL+
Sbjct: 114 TVGLSEVANKRIGSFSLGMGQRLGIAAALLGDPKVLLFDEPVNGLDPDGVRWVRELMRSL 173
Query: 179 KEEGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEEL 219
EG++I S+H+++ + D + +I +G+IIA+ +EE+
Sbjct: 174 AAEGRTIFVSSHLMSEMQETADHLLVIGRGKIIADAPIEEV 214
>gb|AAD20382.1| (AF125999) daunorubicin resistance protein A [Mycobacterium avium]
Length = 315
Score = 136 bits (340), Expect = 2e-31
Identities = 81/220 (36%), Positives = 124/220 (55%), Gaps = 1/220 (0%)
Query: 2 IIVENLRKRFGGKEV-LKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIV 60
I VE L K+FGG V L G+ F+V G + GLLG NG+GK+TT+ ILS +I G+ V
Sbjct: 6 IEVEGLTKKFGGSTVALAGVDFSVPAGTVCGLLGHNGAGKTTTINILSTLIRPTSGRGNV 65
Query: 61 GGVEVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAF 120
G +V P +V+ +G + L LT E +RG+ + + R +L+E F
Sbjct: 66 AGHDVVARPAEVRANIGMAGQFTGLDPMLTGRENLVLFSRLRGLNRRRAKARADELLEQF 125
Query: 121 EIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKE 180
+ ++ + T S G +++ L S+L+ PKVL LDE GLDP+S R L+ +
Sbjct: 126 NLVDAADRRLSTYSGGMFRRVDLASALVVPPKVLFLDEPTTGLDPRSRRDVWALVSSLRV 185
Query: 181 EGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELK 220
+G +++ +T L A+++ D + +I GR+IA GT EELK
Sbjct: 186 QGITVLLTTQYLEEADVLSDSIVVIDHGRVIASGTSEELK 225
>dbj|BAB04009.1| (AP001508) ABC transporter (ATP-binding protein) [Bacillus
halodurans]
Length = 301
Score = 136 bits (340), Expect = 2e-31
Identities = 71/246 (28%), Positives = 142/246 (56%), Gaps = 8/246 (3%)
Query: 4 VENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIVGGV 63
++++ K++ K + S + GE GL+GPNG+GK+T +++++ I+ G +++ G
Sbjct: 5 IKSVTKKYKEKTAVHDFSMDLLSGECVGLIGPNGAGKTTLIKMITNILDPTRGDILLNGK 64
Query: 64 EVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAFEIK 123
++ ++KR +GY+P+ P Y+ +T +E F+G + GI K L + + +++ ++
Sbjct: 65 RIS----EMKREIGYLPQYPDFYQWMTASETLLFMGQLSGISKKKLTKSIPEILSKVGLR 120
Query: 124 KYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKEEGK 183
N + T S G KQ++ + +LLH P +++DE ++ LDP R ++ E K++
Sbjct: 121 GEENSKVSTFSGGMKQRLGIAQALLHKPSFIVMDEPVSALDPIGRREVLNIIEEIKKD-S 179
Query: 184 SIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKEERLEDVFLKLTQAKEEIA 243
+I+ STH+LA AE IC+R+ +I G I + T+ EL + + ++ +++T ++
Sbjct: 180 TILLSTHILADAEEICERLVMIKNGEKIEDTTMMELLNRNSKNKIR---VEITDESKDWI 236
Query: 244 QVVSAL 249
+VV L
Sbjct: 237 EVVKKL 242
>gi|6005701 ATP-binding cassette, sub-family A member 8 [Homo sapiens]
>gi|4240130|dbj|BAA74845.1| (AB020629) KIAA0822 protein
[Homo sapiens]
Length = 1581
Score = 136 bits (339), Expect = 3e-31
Identities = 81/265 (30%), Positives = 145/265 (54%), Gaps = 17/265 (6%)
Query: 1 MIIVENLRKRFGGKE-----------VLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSG 49
+II LRK + GK + +SF V+ GE+ GLLG NG+GKST++++++G
Sbjct: 1239 VIIASCLRKEYAGKRKGCFSKRKNKIATRNVSFCVRKGEVLGLLGHNGAGKSTSIKVITG 1298
Query: 50 IITDFEGKVIVGGVEVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDIL 109
G+V++ G D L+ +GY P+ AL+ +LT + V+G+ K
Sbjct: 1299 DTKPTAGQVLLKG-SGGGDALE---FLGYCPQENALWPNLTVRQHLEVYAAVKGLRKGDA 1354
Query: 110 EERVRKLVEAFEIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPK-SA 168
E + +LV+A +++ + + TLS G K+K+ + S+L +P V++LDE G+DP+
Sbjct: 1355 EVAITRLVDALKLQDQLKSPVKTLSEGIKRKLCFVLSILGNPSVVLLDEPSTGMDPEGQQ 1414
Query: 169 RIFRELLYEFKEEGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELK-EISKEER 227
++++ + F+ + + +TH +A AE +CDRV I+ GR+ G+++ LK + K+
Sbjct: 1415 QMWQAIRATFRNTERGALLTTHYMAEAEAVCDRVAIMVSGRLRCIGSIQHLKSKFGKDYL 1474
Query: 228 LEDVFLKLTQAKEEIAQVVSALKEA 252
LE L Q + A+++ +A
Sbjct: 1475 LEMKVKNLAQVEPLHAEILRLFPQA 1499
>pir||D72484 probable ATP-binding protein APE2516 - Aeropyrum pernix (strain
K1) >gi|5106221|dbj|BAA81532.1| (AP000064) 323aa long
hypothetical ATP-binding protein [Aeropyrum pernix]
Length = 323
Score = 136 bits (339), Expect = 3e-31
Identities = 75/207 (36%), Positives = 123/207 (59%), Gaps = 1/207 (0%)
Query: 17 LKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIVGGVEVAKDPLQVKRIV 76
L G+ V G ++ LLGPNG+GK+T ++ILS ++ G V G +V ++ V+ +
Sbjct: 29 LDGVDLKVGRGTLFSLLGPNGAGKTTLVKILSTLLLPDSGWARVAGFDVVREANNVRSRI 88
Query: 77 GYV-PETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAFEIKKYMNQLIGTLSF 135
G V ALY L+ + F + GIP + RV++L+E ++++ + + S
Sbjct: 89 GVVLGGERALYWRLSGWDNLWFFSQLYGIPPREAKRRVKELLEIVGLEEWAHVRVENYSK 148
Query: 136 GTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKEEGKSIVFSTHVLALA 195
G KQ++ + L++DP+VL+LDE GLDPK+AR R ++ EG++++ +TH + A
Sbjct: 149 GMKQRLHIARGLINDPEVLLLDEPTIGLDPKAAREVRSIIRRIVREGRTVLLTTHYMVEA 208
Query: 196 ELICDRVGIIYQGRIIAEGTVEELKEI 222
E + DRV II +GRI+AEG E+LK +
Sbjct: 209 EELSDRVAIISKGRIVAEGPPEDLKSL 235
>dbj|BAB04164.1| (AP001508) ABC transporter (ATP-binding protein) [Bacillus
halodurans]
Length = 306
Score = 136 bits (338), Expect = 3e-31
Identities = 72/222 (32%), Positives = 132/222 (59%), Gaps = 5/222 (2%)
Query: 1 MIIVENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIV 60
+I NL + + I+ VK+GEIYG LGPNG+GK+TT+R+L G+I G + +
Sbjct: 7 LIETNNLTMTYKHVHAVDRINLKVKEGEIYGFLGPNGAGKTTTIRMLLGLIKASHGSIKI 66
Query: 61 GGVEVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAF 120
G ++ + L + + +G + E+P+ Y L+ + V + +PK R+ +++E
Sbjct: 67 FGKDLKQHRLDILKNIGALVESPSYYPHLSGEDNLETVRKIVKVPK----SRIAEVLELV 122
Query: 121 EIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEF-K 179
+ K ++ + S G KQ++++ ++LL +P+++ILDE NGLDP R L+ K
Sbjct: 123 RLTKVADRKVQEYSLGMKQRLAIAAALLANPRLVILDEPTNGLDPAGIIEIRNLILRLPK 182
Query: 180 EEGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKE 221
E G +++ S+H+L+ E + +VGII +G++I + ++EEL++
Sbjct: 183 EYGITVLLSSHLLSEVEQVASQVGIIAKGKLIFQDSIEELRK 224
>pir||S73019 daunorubicin resistance protein drrA - Mycobacterium leprae
>gi|467205|gb|AAA17362.1| (U00023) drrA; L518_F2_43
[Mycobacterium leprae]
Length = 331
Score = 135 bits (337), Expect = 4e-31
Identities = 81/255 (31%), Positives = 140/255 (54%), Gaps = 8/255 (3%)
Query: 2 IIVENLRKRFGGKEV--LKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVI 59
++V +RK +G ++ L +SF V GE+ GLLGPNG+GK+T + ILS + G
Sbjct: 8 VMVRGVRKTYGKGKIIALDDVSFDVDRGEVIGLLGPNGAGKTTMVDILSTLTRPDRGLAT 67
Query: 60 VGGVEVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEA 119
V G +V +P V+R + + A+ + L+ + G + G+ K + R ++L+E
Sbjct: 68 VAGYDVVSEPAGVRRSIMVTGQQVAVDDQLSGEQNLILFGRLYGLSKSVARVRTQELLEQ 127
Query: 120 FEIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFK 179
F++ + +GT S G +++I + L+ P+V LDE GLDP+S + +L+ FK
Sbjct: 128 FDLLHAGKRRVGTYSGGMRRRIDIACGLVVQPQVAFLDEPTTGLDPRSRQAIWDLVASFK 187
Query: 180 EEGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKEERLEDVFLKLT-QA 238
+ G + + +T L A+ + DR+ +I G +IAEGT ELK R+ + F ++ +
Sbjct: 188 QIGIATLLTTQYLEEADELSDRIILIDHGTVIAEGTASELK-----HRVGETFCEIVPRD 242
Query: 239 KEEIAQVVSALKEAL 253
+++ VV+AL L
Sbjct: 243 LKDLGTVVAALGSLL 257
>pir||C69012 ABC transporter (ATP-binding, daunorubicin resistance) -
Methanobacterium thermoautotrophicum (strain Delta H)
>gi|2622194|gb|AAB85582.1| (AE000880) ABC transporter
(ATP-binding [Methanobacterium thermoautotrophicum]
Length = 312
Score = 135 bits (336), Expect = 6e-31
Identities = 76/255 (29%), Positives = 145/255 (56%), Gaps = 6/255 (2%)
Query: 1 MIIVENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIV 60
+I E+++K++ +KG++ V +G IYG+LGPNG+GK+T + +L I+ G+ V
Sbjct: 4 IIETEDIKKKYDEFLAVKGVNLRVPEGSIYGVLGPNGAGKTTLISMLCTILRPTGGRGTV 63
Query: 61 GGVEVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAF 120
G ++ +D +V+ +G V ++ AL + LT E + G+P+D+ + R+ +++E
Sbjct: 64 NGYDIVRDARKVRESIGIVFQSRALDDILTGREHLEMHAALYGVPRDVRDRRIEEVLELI 123
Query: 121 EIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSAR-IFRELLYEFK 179
+ ++ + T S G K+++ + L+H P+VL LDE GLDP++ I+R + +
Sbjct: 124 ALGDKADEYVKTYSGGMKRRLEIGRGLIHHPRVLFLDEPTLGLDPQTRESIWRYIEKLNR 183
Query: 180 EEGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKEERLEDVFLKLTQAK 239
EE +++ +TH + A+ +CD V I+ G II + LK +E + + +++ +A+
Sbjct: 184 EEDVTVLLTTHYMEEADKLCDEVAIMSHGEIIKADSPGNLK---RELGADTITVRVDRAR 240
Query: 240 --EEIAQVVSALKEA 252
EI + +KEA
Sbjct: 241 GFHEILEKQDYVKEA 255
>emb|CAC11370.1| (AL445063) gliding motility protein related [Thermoplasma
acidophilum]
Length = 305
Score = 135 bits (336), Expect = 6e-31
Identities = 71/221 (32%), Positives = 135/221 (60%), Gaps = 2/221 (0%)
Query: 1 MIIVENLRKRFGGKE-VLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVI 59
+I VE+LR+ + G+ V+ +SF V GEIYGLLG NG+GK+TT+R ++ I+ GKV
Sbjct: 5 VIEVEHLRQTYDGRTFVVDDVSFYVLKGEIYGLLGKNGAGKTTTIRTMTTILPVHYGKVR 64
Query: 60 VGGVEVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEA 119
+ G++V+++ +++R +G V + + ++ + G + +P+++L+ R+ +++E
Sbjct: 65 ILGMDVSENAEKIRRRIGVVLQNES-FDFASVERNLKVYGMLWDVPREVLKARIEEVLEV 123
Query: 120 FEIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFK 179
F++ + LS G K+++ + LHD +L LDE GLDP R + +
Sbjct: 124 FDLGQLRKVRAMELSGGQKKRLQVAREFLHDMDLLFLDEPTVGLDPIMRRSVLNYIRDKA 183
Query: 180 EEGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELK 220
+G +++++T ++ A+ +CDR+ I+ +G+I+AEGT +LK
Sbjct: 184 RKGLTVLYTTQIMEEADYLCDRIAIMNRGKIVAEGTSSDLK 224
>pir||C69993 ABC transporter (ATP-binding protein) homolog ythP - Bacillus
subtilis >gi|2293199|gb|AAC00277.1| (AF008220)
transporter [Bacillus subtilis]
>gi|2635485|emb|CAB14979.1| (Z99119) similar to ABC
transporter (ATP-binding protein) [Bacillus subtilis]
Length = 236
Score = 134 bits (335), Expect = 7e-31
Identities = 76/226 (33%), Positives = 122/226 (53%), Gaps = 13/226 (5%)
Query: 14 KEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIVGGVEVAKDPLQVK 73
K+VL + V+ GE+ GL+G NG+GKST ++ + G+ DF+G + A
Sbjct: 18 KKVLTDVFLEVRKGELVGLIGANGAGKSTAIKAILGLSEDFKGHIAWNDCSFA------- 70
Query: 74 RIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAFEIKKYMNQLIGTL 133
Y+PE P+ YE LT E + + GI + R + L++ F + ++L T
Sbjct: 71 ----YIPEHPSFYEELTLWEHLDLISTLHGIEESEFAHRAQSLLQTFSLDHVKHELPVTF 126
Query: 134 SFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKEEGKSIVFSTHVLA 193
S G +QK+ LI + L P + ++DE GLDP S + F ++L KE G I+ THVL
Sbjct: 127 SKGMQQKLMLIQAFLSKPDMYVIDEPFIGLDPISTKRFVDMLKAEKERGAGILMCTHVLD 186
Query: 194 LAELICDRVGIIYQGRIIAEGTVEELKEIS--KEERLEDVFLKLTQ 237
AE ICDR +I +G + +GT++++++ + + + L D F K Q
Sbjct: 187 TAEKICDRFYMIEKGSLFLQGTLKDVQDKTGLEGQSLLDCFYKAVQ 232
>gb|AAC02761.2| (AC002339) putative ABC transporter [Arabidopsis thaliana]
Length = 1816
Score = 134 bits (335), Expect = 7e-31
Identities = 71/228 (31%), Positives = 132/228 (57%), Gaps = 8/228 (3%)
Query: 1 MIIVENLRKRFGG------KEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDF 54
M+ ++NLRK + G K ++ ++F+V+ GE +G LG NG+GK+TT+ +LSG T
Sbjct: 1380 MLYLQNLRKVYPGDKHHGPKVAVQSLTFSVQAGECFGFLGTNGAGKTTTLSMLSGEETPT 1439
Query: 55 EGKVIVGGVEVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVR 114
G + G ++ P +++ +GY P+ AL+E LT E ++G+ ++ V
Sbjct: 1440 SGTAFIFGKDIVASPKAIRQHIGYCPQFDALFEYLTVKEHLELYARIKGVVDHRIDNVVT 1499
Query: 115 KLVEAFEIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFREL 174
+ + F++ K+ ++ TLS G K+K+S+ +++ DP ++ILDE G+DP + R ++
Sbjct: 1500 EKLVEFDLLKHSHKPSFTLSGGNKRKLSVAIAMIGDPPIVILDEPSTGMDPVAKRFMWDV 1559
Query: 175 LYEFK-EEGK-SIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELK 220
+ GK +++ +TH + A+ +C R+GI+ GR+ G+ + LK
Sbjct: 1560 ISRLSTRSGKTAVILTTHSMNEAQALCTRIGIMVGGRLRCIGSPQHLK 1607
Score = 113 bits (279), Expect = 3e-24
Identities = 68/223 (30%), Positives = 122/223 (54%), Gaps = 5/223 (2%)
Query: 2 IIVENLRKRFGGKE----VLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGK 57
I V NL K + + + + T+ + +I LLG NG+GKSTT+ +L G++ G
Sbjct: 449 IQVRNLHKVYASRRGNCCAVNSLQLTLYENQILSLLGHNGAGKSTTISMLVGLLPPTSGD 508
Query: 58 VIVGGVEVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLV 117
++ G + + ++++ +G P+ L+ LT E ++G+ + L+ V +
Sbjct: 509 ALILGNSIITNMDEIRKELGVCPQHDILFPELTVREHLEMFAVLKGVEEGSLKSTVVDMA 568
Query: 118 EAFEIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYE 177
E + +N L+ LS G K+K+SL +L+ + KV+ILDE +G+DP S R+ +L+ +
Sbjct: 569 EEVGLSDKINTLVRALSGGMKRKLSLGIALIGNSKVIILDEPTSGMDPYSMRLTWQLIKK 628
Query: 178 FKEEGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELK 220
K +G+ I+ +TH + AE + DR+GI+ G + G+ LK
Sbjct: 629 IK-KGRIILLTTHSMDEAEELGDRIGIMANGSLKCCGSSIFLK 670
>pir||T00826 hypothetical protein T32G6.22 - Arabidopsis thaliana (fragment)
Length = 1246
Score = 134 bits (335), Expect = 7e-31
Identities = 71/228 (31%), Positives = 132/228 (57%), Gaps = 8/228 (3%)
Query: 1 MIIVENLRKRFGG------KEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDF 54
M+ ++NLRK + G K ++ ++F+V+ GE +G LG NG+GK+TT+ +LSG T
Sbjct: 810 MLYLQNLRKVYPGDKHHGPKVAVQSLTFSVQAGECFGFLGTNGAGKTTTLSMLSGEETPT 869
Query: 55 EGKVIVGGVEVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVR 114
G + G ++ P +++ +GY P+ AL+E LT E ++G+ ++ V
Sbjct: 870 SGTAFIFGKDIVASPKAIRQHIGYCPQFDALFEYLTVKEHLELYARIKGVVDHRIDNVVT 929
Query: 115 KLVEAFEIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFREL 174
+ + F++ K+ ++ TLS G K+K+S+ +++ DP ++ILDE G+DP + R ++
Sbjct: 930 EKLVEFDLLKHSHKPSFTLSGGNKRKLSVAIAMIGDPPIVILDEPSTGMDPVAKRFMWDV 989
Query: 175 LYEFK-EEGK-SIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELK 220
+ GK +++ +TH + A+ +C R+GI+ GR+ G+ + LK
Sbjct: 990 ISRLSTRSGKTAVILTTHSMNEAQALCTRIGIMVGGRLRCIGSPQHLK 1037
>gb|AAF99691.1|AF267498_1 (AF267498) MutF [Streptococcus mutans]
Length = 233
Score = 134 bits (335), Expect = 7e-31
Identities = 78/232 (33%), Positives = 134/232 (57%), Gaps = 13/232 (5%)
Query: 1 MIIVENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIV 60
M+ +NL K+FG + + ++ V+ IYGLLGPNGSGKSTT+++++G++ G +++
Sbjct: 4 MLETKNLTKQFGKQTAVNQLNLKVERHSIYGLLGPNGSGKSTTLKMITGMLRKTSGHILI 63
Query: 61 GGVEVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAF 120
G + ++ L+ +G + E+P LYE+LT E + G+P ++E V K+V+
Sbjct: 64 DGHDWSRKDLEN---IGALIESPPLYENLTARENLKVRTLMLGLPDSRIDE-VLKIVDLT 119
Query: 121 EIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKE 180
K + G S G KQ++ + +LL+ P++LILDE NGLDP + R L+ F
Sbjct: 120 NTGK---KRAGQFSMGMKQRLGIAIALLNSPQLLILDEPTNGLDPIGIQELRNLIRSFPT 176
Query: 181 EGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKEERLEDVF 232
+G +++ S+H+L+ ++ D +G IIA G + I ++E LE +F
Sbjct: 177 QGITVIISSHILSEIQMTADHIG------IIANGVLGYQDRIHQDEDLEKLF 222
>gb|AAK41395.1| ABC transporter, ATP binding protein [Sulfolobus solfataricus]
Length = 275
Score = 134 bits (334), Expect = 1e-30
Identities = 78/223 (34%), Positives = 135/223 (59%), Gaps = 7/223 (3%)
Query: 1 MIIVENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIV 60
+I V N+ K +G + I+ VK+GEI LLGPNG+GK+T ++ + G +T +G++ V
Sbjct: 3 VIEVNNVWKAYGKIIANEDITMRVKEGEIVALLGPNGAGKTTLVKQIYGELTPTKGEIRV 62
Query: 61 GGVEVAKDPLQ--VKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVE 118
G K P VK+ +G +P+ Y LT + ++G ++G KD +++R +L+E
Sbjct: 63 LG----KKPTDRHVKKFLGVIPQECEPYGDLTVWDNIYYMGRLKGASKDEIKKRGEELLE 118
Query: 119 AFEIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEF 178
+++ N L LS G K++ + +L+++PK+LILDE GLDP++ R E+L
Sbjct: 119 RLDLRSKRNTLARDLSGGLKRRTLIAMALINNPKLLILDEPTTGLDPEARREVWEILLNM 178
Query: 179 KEEGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKE 221
++EG+S++ +TH L AE + D++ + + +II EGT ++KE
Sbjct: 179 RKEGQSMLLTTHYLDEAERLADKIYFLSR-KIIVEGTPTQIKE 220
>pir||S42925 probable transport protein - Staphylococcus aureus
>gi|459256|emb|CAA83065.1| (Z30588) Potential ABC
transporter [Staphylococcus aureus]
Length = 231
Score = 134 bits (334), Expect = 1e-30
Identities = 77/241 (31%), Positives = 140/241 (57%), Gaps = 13/241 (5%)
Query: 1 MIIVENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIV 60
++ +E+L K+ G K +L+ +SF +K G+I GL+G NG+GK+T M+++ G + G
Sbjct: 3 VLTIEHLTKKIGNKTILEDVSFKLKRGQIVGLVGANGAGKTTLMKVILGYSSFQSGNF-- 60
Query: 61 GGVEVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAF 120
V +KD K +G + E P +Y ++ E + + + + K+V
Sbjct: 61 -NVINSKDE---KSNIGALIENPGIYPFMSGYENLKLLNESKNT------QDIDKIVSQL 110
Query: 121 EIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKE 180
+ +Y+++ T S G KQK+ + + L+ P+ +ILDE MNGLDPK+ R REL+ + +
Sbjct: 111 HMDEYIHKKAKTYSLGMKQKLGIAIAFLNKPQFIILDEPMNGLDPKAVRDVRELIVQKAQ 170
Query: 181 EGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKEERLEDVFLKLTQAKE 240
EG + + S+H+L+ I + + II +G+I+ E + EELK+ K+ LE+V L++ + ++
Sbjct: 171 EGVTFLISSHILSELVKITNSILIINKGKIVTETSEEELKQF-KDNDLENVLLEIIERED 229
Query: 241 E 241
+
Sbjct: 230 Q 230
>gi|10956101 ABC transporter subunit PenL [Pediococcus pentosaceus]
>gi|10956124|ref|NP_037576.1| putative ABC transporter
ATP-binding subunit [Pediococcus pentosaceus]
>gi|4587880|gb|AAD25906.1|AF069302_15 (AF069302) ABC
transporter subunit PenL [Pediococcus pentosaceus]
>gi|5091682|gb|AAD39629.1|AF033858_12 (AF033858)
putative ABC transporter ATP-binding subunit
[Pediococcus pentosaceus]
Length = 313
Score = 134 bits (334), Expect = 1e-30
Identities = 76/220 (34%), Positives = 128/220 (57%), Gaps = 4/220 (1%)
Query: 1 MIIVENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIV 60
++ + + K K+V+ +SF+++ G+I LLGPNG+GK+T +R+++ +I G + V
Sbjct: 7 ILTLSKVNKSISQKKVINDVSFSLEKGKILALLGPNGAGKTTIIRLITSLIEQDSGVISV 66
Query: 61 GGVEVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAF 120
++ +P +++ + V LYE+LT E GG IP+D LE ++ +L F
Sbjct: 67 FNGDI--NPSNIRQNIS-VQNDGNLYENLTIFENLKIWGGFYEIPEDHLEVKISELTSRF 123
Query: 121 EIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEF-K 179
EI + +N +G LS G KQK+ +I +LL +PK+LILDE +GLDP + ++L E+ K
Sbjct: 124 EISERLNSKVGELSKGMKQKVLIIRALLTNPKLLILDEPTSGLDPYMIDLLTKILTEYVK 183
Query: 180 EEGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEEL 219
+I+ +TH L E I D V I+ +G ++ G +L
Sbjct: 184 RHETTIIMATHQLLGLESIADDVLILNKGEVVVHGKTTQL 223
>emb|CAB76006.1| (AL157916) putative ABC transporter, ATP-binding subunit
[Streptomyces coelicolor A3(2)]
Length = 312
Score = 134 bits (334), Expect = 1e-30
Identities = 73/215 (33%), Positives = 122/215 (55%), Gaps = 5/215 (2%)
Query: 1 MIIVENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIV 60
+I V +LRK +GG+ V+ G+SF V++GEI+G+LGPNG+GK+TT+ + G+ G+V V
Sbjct: 15 VIEVTDLRKSYGGRPVVDGVSFAVEEGEIFGVLGPNGAGKTTTVECVEGLRVPDAGRVRV 74
Query: 61 GGVEVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAF 120
G++ D +V ++G + L LT E P D R L E
Sbjct: 75 TGLDPVADHRRVAEVLGAQLQQSELQPKLTVREALELYAAFYPKPAD-----WRPLAERL 129
Query: 121 EIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKE 180
++ ++ LS G KQ++ + +L+ DP+V++LDE GLDP++ R +L+ + +
Sbjct: 130 DLVPMLDTRFAKLSGGQKQRLFIALALVGDPRVVVLDELTTGLDPRARRETWQLIEDIRA 189
Query: 181 EGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGT 215
G +++ TH + A+ +CDR+ +I +GRI A T
Sbjct: 190 GGVTVLLVTHFMEEAQRLCDRIAVIDRGRIAALDT 224
>emb|CAB53353.1| (AJ010260) NosF protein [Paracoccus denitrificans]
Length = 299
Score = 134 bits (333), Expect = 1e-30
Identities = 91/251 (36%), Positives = 131/251 (51%), Gaps = 10/251 (3%)
Query: 2 IIVENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIVG 61
+ + L KRF G E L +S + G LLG NG+GKST M+I+ G+I G+V V
Sbjct: 5 LTISRLTKRFQGVEALAEVSLDLGPGMRVALLGHNGAGKSTMMKIILGLIPFDAGEVRVC 64
Query: 62 GVEVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAFE 121
G A Q + V Y+PE A + +LT E +RG R +L+E
Sbjct: 65 GA--APGSSQARMQVAYLPENAAFHPALTGEEQIRHYLSLRGESP----RRAMELLERVG 118
Query: 122 IKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKEE 181
+ K + IGT S G +Q++ L +L+ P++L+LDE +GLDP S R F LL E
Sbjct: 119 LAKAARRRIGTYSKGMRQRVGLAQTLIGRPRLLVLDEPTSGLDPVSRRDFYALLDGLAAE 178
Query: 182 GKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKEERLEDVFLKLTQAKEE 241
G +I+ S+HVL E DR+ I+ QGR++AEGT+ EL + V L +T A
Sbjct: 179 GAAILLSSHVLTEVEARTDRILILSQGRLVAEGTLAEL----RRRAALPVGLTVTPADGA 234
Query: 242 IAQVVSALKEA 252
+ +AL +A
Sbjct: 235 AGALAAALPQA 245
>emb|CAC08315.1| (AL392149) putative ABC transport system ATP-binding protein
[Streptomyces coelicolor A3(2)]
Length = 336
Score = 134 bits (333), Expect = 1e-30
Identities = 75/227 (33%), Positives = 127/227 (55%)
Query: 5 ENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIVGGVE 64
E L KR+G K L G TV++G ++GLLGPNG+GK+T +RILS +I G+ V G++
Sbjct: 10 EGLEKRYGDKRALDGFDLTVREGTVHGLLGPNGAGKTTAVRILSTLIRLDGGRAEVAGLD 69
Query: 65 VAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAFEIKK 124
+A+ +V+ +G + A+ E LT + G + + R +L+E F++
Sbjct: 70 IARQAREVRARIGLTGQYAAVDEVLTGRQNLEMFGRLFHLGGRRARARAVELLEQFDLTD 129
Query: 125 YMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKEEGKS 184
++ +G S G ++++ L +S++ P VL LDE GLDP+S E + E G +
Sbjct: 130 AADRGVGKYSGGMRRRLDLAASMILAPSVLFLDEPTTGLDPRSRGEVWESVRELVASGTT 189
Query: 185 IVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKEERLEDV 231
++ +T L A+ + R+ +I +GR IA+ T + LK + +R+E V
Sbjct: 190 VLLTTQYLEEADKLASRITVIDRGRAIADDTPDGLKNLVGGDRIEVV 236
>dbj|BAB04167.1| (AP001508) ABC transporter (ATP-binding protein) [Bacillus
halodurans]
Length = 307
Score = 134 bits (333), Expect = 1e-30
Identities = 70/220 (31%), Positives = 124/220 (55%), Gaps = 4/220 (1%)
Query: 1 MIIVENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIV 60
+I + L+K + V+ + V +GE++G LGPNGSGK+T MR+L G++ G + +
Sbjct: 2 IIEAKGLKKIYNHVPVVDDVDLLVPEGEVFGFLGPNGSGKTTVMRMLLGLVKTDGGDIKI 61
Query: 61 GGVEVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAF 120
G + K+ L + + VG + ETPA Y L + +R I ++ K ++
Sbjct: 62 LGKSLEKNRLSILKEVGALIETPAYYGHLNAIDNLKIAATLRQIED---HSQIEKTLDRV 118
Query: 121 EIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEF-K 179
+ ++ + + S G KQ++ + +LLH PK+L+LDE NGLDP+ + REL+ + K
Sbjct: 119 GLTSSKHKKVKSFSLGMKQRLGIAMALLHQPKLLLLDEPTNGLDPEGIQEMRELIRDLPK 178
Query: 180 EEGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEEL 219
+EG ++ S+H+L + + +VG+IY G ++ +G +L
Sbjct: 179 KEGVTVFVSSHLLGEIDQVASQVGVIYHGSLLYQGQKNDL 218
>pir||H72269 ABC transporter, ATP-binding protein - Thermotoga maritima (strain
MSB8) >gi|4981861|gb|AAD36376.1|AE001785_7 (AE001785)
ABC transporter, ATP-binding protein [Thermotoga
maritima]
Length = 258
Score = 133 bits (332), Expect = 2e-30
Identities = 81/241 (33%), Positives = 136/241 (55%), Gaps = 6/241 (2%)
Query: 1 MIIVENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIV 60
++ V +RK FG VL + F ++G+ ++G NGSGKST ++I+ G++ +G+V V
Sbjct: 4 VVEVSGVRKSFGELRVLDKVDFYAEEGDFKVIVGENGSGKSTLLKIMIGLLLPDDGEVKV 63
Query: 61 GGVEVAKDPLQVKRIVGYV-PETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEA 119
GV+V K ++ +G V +LY LT E GGV G+PK + ER+ +L++
Sbjct: 64 LGVDVKKHWKKLSARIGVVLANERSLYWKLTAWENLDIFGGVYGVPKKVRRERMEELLKR 123
Query: 120 FEIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFK 179
F + +Y ++ + S G ++K+ + +L+HDP+VL +DE +NGLDP S R L E
Sbjct: 124 FGLFEYKDKPVEEFSTGMRKKLMICKALIHDPEVLFIDEILNGLDPPSVREMVGFLDERN 183
Query: 180 EEGKSIVFSTHVL-ALAELICDRVGIIYQGRIIAEGTVEELKEISKEERLEDVFLKLTQA 238
G +IV +HVL L E C V ++ GR+ E ++++ S+ + +VF L +
Sbjct: 184 RRGLTIVMISHVLHVLPENAC--VVLLRNGRVQMEVRYKDIR--SERSEVYEVFENLIRG 239
Query: 239 K 239
+
Sbjct: 240 R 240
>pir||T47150 hypothetical protein DKFZp547P193.1 - human (fragment)
>gi|7328111|emb|CAB82398.1| (AL162060) hypothetical
protein [Homo sapiens]
Length = 373
Score = 133 bits (332), Expect = 2e-30
Identities = 72/221 (32%), Positives = 125/221 (55%)
Query: 24 VKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIVGGVEVAKDPLQVKRIVGYVPETP 83
V+ GE +GLLG NG+GK++T ++L+G + G+ V G V K+ LQV++ +GY P+
Sbjct: 15 VRPGECFGLLGVNGAGKTSTFKMLTGDESTTGGEAFVNGHSVLKELLQVQQSLGYCPQCD 74
Query: 84 ALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAFEIKKYMNQLIGTLSFGTKQKISL 143
AL++ LT E +RGI V+ +E E+ KY ++ GT S G K+K+S
Sbjct: 75 ALFDELTAREHLQLYTRLRGISWKDEARVVKWALEKLELTKYADKPAGTYSGGNKRKLST 134
Query: 144 ISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKEEGKSIVFSTHVLALAELICDRVG 203
+L+ P + LDE G+DPK+ R L+ + + G+S+V ++H + E +C R+
Sbjct: 135 AIALIGYPAFIFLDEPTTGMDPKARRFLWNLILDLIKTGRSVVLTSHSMEECEALCTRLA 194
Query: 204 IIYQGRIIAEGTVEELKEISKEERLEDVFLKLTQAKEEIAQ 244
I+ GR+ G+++ LK + + V K +Q+ +++ +
Sbjct: 195 IMVNGRLRCLGSIQHLKNRFGDGYMITVRTKSSQSVKDVVR 235
>gb|AAF81232.1| (AF263012) ABC transporter ATP binding protein [Streptomyces
griseus subsp. griseus]
Length = 318
Score = 133 bits (332), Expect = 2e-30
Identities = 77/220 (35%), Positives = 129/220 (58%), Gaps = 7/220 (3%)
Query: 1 MIIVENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIV 60
+I ++ K+FG L ++ TV G +YG LGPNG+GKSTT+R+L G+ G+V V
Sbjct: 4 LIECTDVTKKFGDFTALSRLNLTVPQGVVYGYLGPNGAGKSTTIRMLMGLSRPTSGQVRV 63
Query: 61 GGVEVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAF 120
G + DP +V+R +GY+P L E LT + + G +RG+ + +LV+ F
Sbjct: 64 LGQDPT-DP-EVRRRIGYLPGELRLDERLTIGQTLASWGRLRGLTDTAYRD---ELVQRF 118
Query: 121 EIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKE 180
I ++ + LS G ++K+ L+ + + P++LILDE NGLDP ++F + E ++
Sbjct: 119 GIDP--SRRVRGLSTGNRRKVGLVGAFMAKPELLILDEPTNGLDPLMQQVFLATVEEARD 176
Query: 181 EGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELK 220
G+S++ S+H+L+ E + D V ++ GR+ A G +EL+
Sbjct: 177 NGQSVLLSSHILSEVERVADVVAVLQGGRLAASGPTQELR 216
>gb|AAK42130.1| Antibiotic ABC transporter ATP binding protein [Sulfolobus
solfataricus]
Length = 297
Score = 133 bits (332), Expect = 2e-30
Identities = 81/223 (36%), Positives = 131/223 (58%), Gaps = 12/223 (5%)
Query: 1 MIIVENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIV 60
MI+V ++ K++G K L IS VK GE L+GPNG+GK+T +RIL ++ +G+V +
Sbjct: 1 MIVVSSIVKKYGNKIALDNISLEVKKGEFVSLIGPNGAGKTTLIRILLTLMKPDKGEVQI 60
Query: 61 GGVEVAKDPLQVKRI---VGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLV 117
G ++P + KRI +GYV E P LT + +RG+ K V++++
Sbjct: 61 LG----ENPFRNKRIFKAIGYVQEIPNYPPFLTGRQVLELSAKIRGVDK----SEVKRVL 112
Query: 118 EAFEIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYE 177
E E++ Y N I S G Q+I++ SLL +P +LI+DE G+DP + RELL +
Sbjct: 113 EFVEMENYANSPIIKYSKGMVQRIAIAESLLGNPSILIMDEPNMGIDPIFSLKTRELLNK 172
Query: 178 FK-EEGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEEL 219
K ++ SI+ ++H L + + DR+ +IY+G+I+ GTVE++
Sbjct: 173 LKRKDNVSILMTSHELEDVKKLSDRIFMIYKGKIVFSGTVEDM 215
>pir||E72384 ABC transporter, ATP-binding protein - Thermotoga maritima (strain
MSB8) >gi|4980892|gb|AAD35474.1|AE001718_11 (AE001718)
ABC transporter, ATP-binding protein [Thermotoga
maritima]
Length = 301
Score = 133 bits (331), Expect = 2e-30
Identities = 79/243 (32%), Positives = 133/243 (54%), Gaps = 11/243 (4%)
Query: 4 VENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIVGGV 63
V +L+K +G + + GISFTV+ G ++ LGPNG+GK+TT+ IL G+ G++ G
Sbjct: 17 VVDLKKHYGDVKAVDGISFTVERGTVFSFLGPNGAGKTTTVEILEGLRKKDSGEIYYFGE 76
Query: 64 EVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAFEIK 123
+ KR +G + A +E+LT E G+ G D+ E ++ F ++
Sbjct: 77 RKDVLDRETKRKIGVCLQKSAFFENLTVWETLKLFRGLYGTGLDLKE-----VMGLFSLE 131
Query: 124 KYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKEEGK 183
+++ TLS G Q++++ + ++DP+++ LDE GLDP++ R + + FK GK
Sbjct: 132 NIEKKMVKTLSGGQLQRLAVAVAFINDPEIVFLDEPTTGLDPQARRQIWDTIEHFKNLGK 191
Query: 184 SIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEE------LKEISKEERLEDVFLKLTQ 237
+I +TH + AE + D V II G+IIAEGT LK + + + +DV ++ +
Sbjct: 192 TIFLTTHYMEEAERLSDHVCIIDHGKIIAEGTPSSLISSSGLKTVVEFDCDQDVNVRYLE 251
Query: 238 AKE 240
KE
Sbjct: 252 KKE 254
>pir||E81337 ABC-transporter ATP-binding protein Cj0669 [imported] -
Campylobacter jejuni (strain NCTC 11168)
>gi|6968131|emb|CAB72946.1| (AL139076) ABC-transporter
ATP-binding protein [Campylobacter jejuni]
Length = 242
Score = 132 bits (329), Expect = 4e-30
Identities = 71/226 (31%), Positives = 128/226 (56%), Gaps = 5/226 (2%)
Query: 4 VENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIVGGV 63
+ NL K +++ GIS V GE+ GLLGPNG+GK+TT ++ G+I+ GKV++ G+
Sbjct: 6 IVNLEKIIKKTKIIHGISLEVNSGEVVGLLGPNGAGKTTTFYMICGLISPSSGKVLLDGL 65
Query: 64 EVAKDPL--QVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAFE 121
+V KDPL + + +GY+P+ ++++ L+ + + K IL ++V +++E
Sbjct: 66 DVTKDPLNKRARSGIGYLPQESSIFKDLSVEDNLLLAAQIFYKDKKILHDKVEQMLELLS 125
Query: 122 IKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKEE 181
I+ + +LS G +++ + SL+ +PK L+LDE G+DP + + L+ E K
Sbjct: 126 IEPIRLRKGLSLSGGERRRCEIARSLMCEPKFLLLDEPFAGVDPIAVAEIQTLIKELKRL 185
Query: 182 GKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEEL---KEISK 224
G ++ + H + ICDR +I G ++A G +E+ K++ K
Sbjct: 186 GIGVLITDHNVRETLAICDRAYVIRSGSLLASGNADEIATNKDVKK 231
>gb|AAB61163.1| (U77778) putative ABC transporter subunit [Staphylococcus
epidermidis] >gi|1586615|prf||2204285A epiF gene
[Staphylococcus epidermidis]
Length = 231
Score = 132 bits (328), Expect = 5e-30
Identities = 79/238 (33%), Positives = 126/238 (52%), Gaps = 17/238 (7%)
Query: 2 IIVENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIVG 61
I NL KRF + +LK I+ V E+YGLLG NG+GKST M+I+ GI+ G + +
Sbjct: 6 IETRNLNKRFKKETILKDINLKVYPNEVYGLLGINGAGKSTLMKIICGILPQTSGDIYLD 65
Query: 62 GVEVAKDPLQVKRI--VGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEA 119
G PL K + +G + E+P Y L+ + V + ++I + K++E
Sbjct: 66 G-----SPLTRKELTNIGSLIESPPTYNHLSAQDNLKVVA----LNENIDFNEISKVLEL 116
Query: 120 FEIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFK 179
+ + + S G KQ++ + +L+ PK+L+LDE NGLDP + RELL
Sbjct: 117 VNLNVEPQKKVKNFSLGMKQRLGIAMALIKKPKLLVLDEPSNGLDPYGIQELRELLKSLT 176
Query: 180 EEGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKEERLEDVFLKLTQ 237
S++ S+H+L+ + + D VGII+ G++ E +E +E LEDVF +T+
Sbjct: 177 NLNTSVIISSHILSEIQQLADHVGIIHNGKL------EYQEENKTDENLEDVFFNITK 228
>pir||T36344 probable ABC-type transport system ATP-binding protein -
Streptomyces coelicolor >gi|4808357|emb|CAB42771.1|
(AL049841) putative ABC transporter ATP-binding
component [Streptomyces coelicolor A3(2)]
Length = 315
Score = 132 bits (328), Expect = 5e-30
Identities = 72/230 (31%), Positives = 125/230 (54%)
Query: 2 IIVENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIVG 61
I VE RK +G K L G+ TV G ++G+LGPNG+GK+T +RILS ++ G+V V
Sbjct: 8 ITVEGARKEYGSKSALDGLDLTVTRGTVHGVLGPNGAGKTTLVRILSTLLRPDAGRVEVA 67
Query: 62 GVEVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAFE 121
G +V + V+ +G + + AL E L + G + + R +L+ F
Sbjct: 68 GHDVVAEAYAVRLRIGLLGQHAALDEELGGRQNLEMFGRLHHLGARGARARADELLVRFG 127
Query: 122 IKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKEE 181
+ + +G S G ++++ L +SL+ +P+VL LDE GLDP+ + +
Sbjct: 128 LSDTGRKPVGAYSGGMRRRLDLAASLITEPEVLFLDEPTTGLDPRGRAEVWDSVRSLVGA 187
Query: 182 GKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKEERLEDV 231
G +++ +T L A+ + DR+ ++ GR++A+GT +ELK + +R++ V
Sbjct: 188 GTTVLLTTQYLEEADQLADRISVVDAGRVVADGTADELKAATGGDRVDVV 237
>emb|CAB94554.1| (AL359152) putative ABC transporter, ATP-binding subunit
[Streptomyces coelicolor A3(2)]
Length = 260
Score = 132 bits (328), Expect = 5e-30
Identities = 77/231 (33%), Positives = 126/231 (54%), Gaps = 4/231 (1%)
Query: 10 RFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIVGGVEVAKDP 69
R G E ++GI TV++GEI G LGPNG+GK+TT+R+L+ ++ G V G ++A DP
Sbjct: 16 RRGPVEAVRGIDLTVREGEILGFLGPNGAGKTTTLRMLTTLLAPTGGAATVAGHDLATDP 75
Query: 70 LQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAFEIKKYMNQL 129
V+ GYV ++ + +T E G + + + ER +L + +++
Sbjct: 76 AGVRAACGYVAQSGGVDPQITVREELVTQGRLYRLSRARAAERAGELARDLGLTGLLDRR 135
Query: 130 IGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKE-EGKSIVFS 188
G LS G ++++ + +L H PKVL LDE GLDP S +L+ ++ G ++ +
Sbjct: 136 CGALSGGQRRRLDIAMALTHRPKVLFLDEPTTGLDPGSRADLWDLVRRLRDAHGTTVFLT 195
Query: 189 THVLALAELICDRVGIIYQGRIIAEGTVEELK---EISKEERLEDVFLKLT 236
TH L A+ + DR+ ++ G ++AEGT LK S + L+D FL +T
Sbjct: 196 THYLDEADALSDRLVVVDGGTVVAEGTPAALKLEYGGSPDATLQDTFLAVT 246
>gb|AAC44357.1| (U43537) ATP-binding protein involved in mithramycin resistance
[Streptomyces argillaceus]
Length = 320
Score = 131 bits (327), Expect = 6e-30
Identities = 76/234 (32%), Positives = 126/234 (53%), Gaps = 5/234 (2%)
Query: 1 MIIVENLRKRF----GGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEG 56
MI + L K F G E + G+ FTV GEI G LGPNG+GK+TTMR+L+ ++ G
Sbjct: 1 MIQAKGLAKTFTTKQGPVEAVAGVDFTVHTGEIVGFLGPNGAGKTTTMRMLTTLLPPSSG 60
Query: 57 KVIVGGVEVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKL 116
++ G ++ +P +V+ +GYV + S G + G+ + E R ++
Sbjct: 61 TAVIAGRDLLHEPAKVRTHIGYVSQAGGAKPSSPVRRDLVLQGRLYGMSRSEAEARADEV 120
Query: 117 VEAFEIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLY 176
+ +++ +++I TLS +++ + L+H P++L LDE LDP+S E +
Sbjct: 121 ITQLGLEELADRIIQTLSGCQARRVDMALGLMHQPELLFLDEPTANLDPESRNDVWEHIR 180
Query: 177 EFKEE-GKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKEERLE 229
++E G ++ +TH L A+ +CDRV II +GRIIAE + LK + +E
Sbjct: 181 RLRDERGTTVFLTTHYLDEADSLCDRVLIIDKGRIIAEDSPRSLKAAISHDTIE 234
>dbj|BAA95019.1| (AB033992) ATP-binding protein [Streptomyces kasugaensis]
Length = 329
Score = 131 bits (327), Expect = 6e-30
Identities = 75/224 (33%), Positives = 131/224 (58%), Gaps = 3/224 (1%)
Query: 17 LKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIVGGVEVAKDPLQVKRIV 76
L ++ +V +GE +G+LGPNG+GK+T +RILS ++ G+ +V G +V + QV+R +
Sbjct: 36 LDSVNLSVPEGETHGVLGPNGAGKTTLVRILSTMLLPTSGRALVAGHDVTTEADQVRRRI 95
Query: 77 GYV-PETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAFEIKKYMNQLIGTLSF 135
G V LY +T + F + + +++ R ++L+E + ++ + S
Sbjct: 96 GIVFGGDNGLYTRITARQNLVFWATMYRVDASVVKRRSQELLERVGLADRADEPVEGFSR 155
Query: 136 GTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKEEGKSIVFSTHVLALA 195
G +Q++ L L+ DP VL LDE G+DP + R FR+L++E K EG++I+ +TH ++ A
Sbjct: 156 GMRQRLHLARGLIGDPAVLFLDEPTMGMDPLATRDFRDLVHELKAEGRTILITTHDMSEA 215
Query: 196 ELICDRVGIIYQGRI-IAEGTVEELKEISKEERLEDVFLKLTQA 238
E +CDRV ++ G I + E T + +S +R+ DV L+ Q+
Sbjct: 216 EALCDRVSLVDHGSILVTEPTATIGRMLSGHDRI-DVTLREDQS 258
>sp|P45073|YHBG_HAEIN PROBABLE ABC TRANSPORTER ATP-BINDING PROTEIN HI1148
>gi|1074660|pir||I64167 hypothetical protein HI1148 -
Haemophilus influenzae (strain Rd KW20)
>gi|1574704|gb|AAC22803.1| (U32794) ABC transporter,
ATP-binding protein [Haemophilus influenzae Rd]
Length = 241
Score = 131 bits (326), Expect = 8e-30
Identities = 71/239 (29%), Positives = 137/239 (56%), Gaps = 12/239 (5%)
Query: 1 MIIVENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIV 60
++ ENL K + ++V+ +S TV EI GLLGPNG+GK+TT ++ G++ +GK+++
Sbjct: 3 ILTAENLAKSYKSRKVVSDVSLTVNSNEIVGLLGPNGAGKTTTFYMVVGLVRQDQGKIVI 62
Query: 61 GGVEVAKDPL--QVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDIL----EERVR 114
G +++ P+ + +R +GY+P+ +++ LT E V +R KD+ E+
Sbjct: 63 DGEDISLLPMHNRAQRGIGYLPQEASIFRRLTVYENLMAVLEIR---KDLTPQQRREKAD 119
Query: 115 KLVEAFEIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFREL 174
+L+E F I + L LS G ++++ + +L +PK ++LDE G+DP S +++
Sbjct: 120 ELIEEFNISHIRDNLGQALSGGERRRVEIARALAANPKFILLDEPFAGVDPISVSDIKKI 179
Query: 175 LYEFKEEGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKEERLEDVFL 233
+ + + G ++ + H + +C+R I+ G+IIA GT E ++ +E+++ V+L
Sbjct: 180 ITDLRNRGLGVLITDHNVRETLDVCERAYIVGAGKIIATGTPE---QVMNDEQVKRVYL 235
>gb|AAK41557.1| Antibiotic ABC transporter, ATP binding protein [Sulfolobus
solfataricus]
Length = 297
Score = 131 bits (325), Expect = 1e-29
Identities = 80/223 (35%), Positives = 128/223 (56%), Gaps = 12/223 (5%)
Query: 1 MIIVENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIV 60
MI+V N+ K++G K L +S VK E L+GPNG+GK+T +RIL ++ G+V +
Sbjct: 1 MIVVSNIVKKYGNKIALDNVSLEVKKREFVSLIGPNGAGKTTLIRILLTLMKPDRGEVQI 60
Query: 61 GGVEVAKDPLQVKRI---VGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLV 117
G ++P + KRI VGYV E P LT + +RG+ K V +++
Sbjct: 61 LG----ENPFKSKRIFKEVGYVQEIPNYPPFLTGKQVLELSAKIRGVDK----SEVNRVL 112
Query: 118 EAFEIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYE 177
E E++ Y N I S G Q+I++ +LL +P +LI+DE G+DP + RELL +
Sbjct: 113 EFVEMENYANNPIVKYSKGMVQRIAIAEALLGNPSILIMDEPNMGIDPIFSLKTRELLNK 172
Query: 178 FK-EEGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEEL 219
K ++ SI+ ++H L + + DR+ +IY+G+I+ GTVE++
Sbjct: 173 LKRKDNVSILMTSHELEDVKKLSDRIFMIYKGKIVFSGTVEDM 215
>gb|AAG34388.1|AF197468_4 (AF197468) ATP/GTP binding protein; NosF [Pseudomonas fluorescens]
Length = 305
Score = 130 bits (324), Expect = 1e-29
Identities = 73/221 (33%), Positives = 127/221 (57%), Gaps = 6/221 (2%)
Query: 1 MIIVENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIV 60
++ +E + +R+G VL+G+ T+ GE+ GL G NG+GK+TTM+++ G++ EG+V V
Sbjct: 3 VVEIEGVSQRYGDVAVLRGLDLTLAQGEVLGLFGHNGAGKTTTMKLILGLLRASEGEVRV 62
Query: 61 GGVEVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAF 120
G DP V++++GY+PE Y L+ E ++G E+V +L+E
Sbjct: 63 FG-RAPSDP-SVRQMLGYLPENVMFYPQLSGLETLRHFARLKGAAP----EQVERLLEEV 116
Query: 121 EIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKE 180
+ + + T S G +Q++ L +LL P++L+LDE GLDP + + +LL +
Sbjct: 117 GLAGAARRRVRTYSKGMRQRLGLAQALLGQPRLLLLDEPTVGLDPIATQDLYQLLDRLRW 176
Query: 181 EGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKE 221
+G SI+ +HVL E +R I+ +GR++A G++ L+E
Sbjct: 177 QGTSIILCSHVLPGVEAHINRAAILTRGRLLALGSLARLRE 217
>sp|P32010|DRRA_STRPE DAUNORUBICIN RESISTANCE ATP-BINDING PROTEIN DRRA
>gi|625935|pir||S27707 daunorubicin resistance protein -
Streptomyces peucetius >gi|153230|gb|AAA74717.1|
(M73758) daunorubicin resistance protein [Streptomyces
peucetius]
Length = 330
Score = 130 bits (323), Expect = 2e-29
Identities = 76/247 (30%), Positives = 134/247 (53%), Gaps = 1/247 (0%)
Query: 2 IIVENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIVG 61
I L K + G + G+ V G +YG+LGPNG+GKSTT+R+L+ ++ G V
Sbjct: 9 IETSGLVKVYNGTRAVDGLDLNVPAGLVYGILGPNGAGKSTTIRMLATLLRPDGGTARVF 68
Query: 62 GVEVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAFE 121
G +V +P V+R + + ++ E LT E +G ++G ER +L++ F
Sbjct: 69 GHDVTSEPDTVRRRISVTGQYASVDEGLTGTENLVMMGRLQGYSWARARERAAELIDGFG 128
Query: 122 IKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKEE 181
+ ++L+ T S G ++++ + +S++ P +L LDE GLDP+S +++ +
Sbjct: 129 LGDARDRLLKTYSGGMRRRLDIAASIVVTPDLLFLDEPTTGLDPRSRNQVWDIVRALVDA 188
Query: 182 GKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKEERLEDVFLKLTQAKEE 241
G +++ +T L A+ + DR+ +I GR+IAEGT ELK S + + L Q++ E
Sbjct: 189 GTTVLLTTQYLDEADQLADRIAVIDHGRVIAEGTTGELKS-SLGSNVLRLRLHDAQSRAE 247
Query: 242 IAQVVSA 248
+++SA
Sbjct: 248 AERLLSA 254
>pir||S42927 probable transport protein - Staphylococcus epidermidis
>gi|459262|emb|CAA83061.1| (Z30586) ABC transporter
(putative) [Staphylococcus epidermidis]
>gi|6594276|dbj|BAA88414.1| (AB016613) ATP-binding
protein [Staphylococcus aureus]
>gi|6594280|dbj|BAA88417.1| (AB016614) ATP-binding
protein [Staphylococcus aureus]
>gi|6594284|dbj|BAA88420.1| (AB016615) ATP-binding
protein [Staphylococcus aureus]
Length = 231
Score = 130 bits (323), Expect = 2e-29
Identities = 79/241 (32%), Positives = 138/241 (56%), Gaps = 13/241 (5%)
Query: 1 MIIVENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIV 60
++ VE+L K+ G K +LK IS +K G+I GL+G NG+GK++ M+++ G EG
Sbjct: 3 VLTVEHLTKKIGNKTILKDISLNLKRGQIVGLVGANGAGKTSLMKVILGYSIYQEGNF-- 60
Query: 61 GGVEVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAF 120
EV ++ + K VG + E P +Y F S ++ + + + + +V
Sbjct: 61 ---EVIENKHK-KSNVGALIENPGVYP------FMSGYDNLKLLNETKNTQDIDTIVSQL 110
Query: 121 EIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKE 180
++ +Y++ T S G KQK+ + + L+ P+++ILDE MNGLDP++ R REL+ + E
Sbjct: 111 KMDEYIHNKAKTYSLGMKQKLGIAIAFLNQPQLIILDEPMNGLDPRAVRDVRELIVKKAE 170
Query: 181 EGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKEERLEDVFLKLTQAKE 240
EG + + S+H+L+ I + + II +G+I+ E T EEL + K+ LE+V L + ++
Sbjct: 171 EGVTFLISSHILSELVKITNSILIINKGKIVTETTEEELNQY-KDNDLENVLLSIIDKED 229
Query: 241 E 241
+
Sbjct: 230 Q 230
>pir||S42931 probable transport protein stpB - Staphylococcus hominis
>gi|459265|emb|CAA83063.1| (Z30587) Potential ABC
transporter [Staphylococcus hominis]
Length = 231
Score = 130 bits (323), Expect = 2e-29
Identities = 79/241 (32%), Positives = 138/241 (56%), Gaps = 13/241 (5%)
Query: 1 MIIVENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIV 60
++ VE+L K+ G K +LK IS +K G+I GL+G NG+GK++ M+++ G EG
Sbjct: 3 VLTVEHLTKKIGNKTILKDISLNLKRGQIVGLVGANGAGKTSLMKVILGYSIYQEGNF-- 60
Query: 61 GGVEVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAF 120
EV ++ + K VG + E P +Y F S ++ + + + + +V
Sbjct: 61 ---EVIENKHK-KSNVGALIENPGIYP------FMSGYDNLKLLNETKNTQDIDTIVSQL 110
Query: 121 EIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKE 180
++ +Y++ T S G KQK+ + + L+ P+++ILDE MNGLDP++ R REL+ + E
Sbjct: 111 KMDEYIHNKAKTYSLGMKQKLGIAIAFLNQPQLIILDEPMNGLDPRAVRDVRELIVKKAE 170
Query: 181 EGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKEERLEDVFLKLTQAKE 240
EG + + S+H+L+ I + + II +G+I+ E T EEL + K+ LE+V L + ++
Sbjct: 171 EGITFLISSHILSELVKITNSILIINKGKIVTETTEEELNQY-KDNDLENVLLSIIDKED 229
Query: 241 E 241
+
Sbjct: 230 Q 230
>sp|P36879|YADG_ECOLI HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PROTEIN YADG
>gi|628771|pir||S45204 probable ABC-type transport
protein yagD - Escherichia coli
>gi|473794|dbj|BAA05583.1| (D26562) 'ORF' [Escherichia
coli] >gi|1786319|gb|AAC73238.1| (AE000122) putative
ATP-binding component of a transport system [Escherichia
coli K12]
Length = 308
Score = 129 bits (322), Expect = 2e-29
Identities = 72/224 (32%), Positives = 123/224 (54%), Gaps = 1/224 (0%)
Query: 4 VENLRKRF-GGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIVGG 62
++ L+K + GG + L+GI V+ G+ Y LLGPNG+GKSTT+ I+S ++ G+V V G
Sbjct: 7 LQQLKKTYPGGVQALRGIDLQVEAGDFYALLGPNGAGKSTTIGIISSLVNKTSGRVSVFG 66
Query: 63 VEVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAFEI 122
++ KD + KR +G VP+ T + G G+ + R K ++ ++
Sbjct: 67 YDLEKDVVNAKRQLGLVPQEFNFNPFETVQQIVVNQAGYYGVERKEAYIRSEKYLKQLDL 126
Query: 123 KKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKEEG 182
N+ LS G K+++ + +L+H+PK+LILDE G+D + R L + ++G
Sbjct: 127 WGKRNERARMLSGGMKRRLMIARALMHEPKLLILDEPTAGVDIELRRSMWGFLKDLNDKG 186
Query: 183 KSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKEE 226
+I+ +TH L AE++C +GII G ++ +++ L K E
Sbjct: 187 TTIILTTHYLEEAEMLCRNIGIIQHGELVENTSMKALLAKLKSE 230
>gi|11498586 osmoprotection protein (proV) [Archaeoglobus fulgidus]
>gi|7428829|pir||E69372 osmoprotection protein (proV)
homolog - Archaeoglobus fulgidus
>gi|2649615|gb|AAB90260.1| (AE001036) osmoprotection
protein (proV) [Archaeoglobus fulgidus]
Length = 361
Score = 129 bits (322), Expect = 2e-29
Identities = 71/233 (30%), Positives = 140/233 (59%), Gaps = 3/233 (1%)
Query: 2 IIVENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIVG 61
+++EN+ KR+G ++ ++ TV+ GE+ L+GP+GSGK+TT+R+++ ++ EG+V++
Sbjct: 9 VVLENVSKRYGNFFAVRELNLTVEGGELLALIGPSGSGKTTTLRMINRLVEPDEGRVLIN 68
Query: 62 GVEVAK-DPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAF 120
G ++++ D ++++R +GYV + L+ + E + + G ++ + +RV +L++
Sbjct: 69 GQDISEIDAVRLRRNIGYVIQQIGLFPHMKVWENIGLIPKLEGWEEEKIRQRVDELLKLV 128
Query: 121 EIK-KYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFK 179
++ ++ + LS G +Q++ L +L +P +L++DE LDP + +E K
Sbjct: 129 DLPIEFAERYPWQLSGGQQQRVGLARALALNPPLLLMDEPFGALDPILRKQLQEEFARIK 188
Query: 180 EE-GKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKEERLEDV 231
EE GK+IVF TH + A + DR+ I+ +GR++ G EEL E +ED+
Sbjct: 189 EELGKTIVFVTHDVEEAFRLGDRIAIMNEGRLVQVGEPEELIINPANEFVEDI 241
>pir||C65111 probable ABC transporter (ntrA/rpoN 5'region) - Escherichia coli
(strain K-12) >gi|606140|gb|AAA58003.1| (U18997)
ORF_o241 [Escherichia coli] >gi|1789593|gb|AAC76233.1|
(AE000399) putative ATP-binding component of a transport
system [Escherichia coli K12]
Length = 241
Score = 129 bits (321), Expect = 3e-29
Identities = 70/235 (29%), Positives = 135/235 (56%), Gaps = 6/235 (2%)
Query: 2 IIVENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIVG 61
+ +NL K + G+ V++ +S TV GEI GLLGPNG+GK+TT ++ GI+ G +I+
Sbjct: 4 LTAKNLAKAYKGRRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNIIID 63
Query: 62 GVEVAKDPL--QVKRIVGYVPETPALYESLTPAEFFSFVGGVRG-IPKDILEERVRKLVE 118
+++ PL + +R +GY+P+ +++ L+ + V +R + + E+R +L+E
Sbjct: 64 DDDISLLPLHARARRGIGYLPQEASIFRRLSVYDNLMAVLQIRDDLSAEQREDRANELME 123
Query: 119 AFEIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEF 178
F I+ + + +LS G ++++ + +L +PK ++LDE G+DP S + ++
Sbjct: 124 EFHIEHLRDSMGQSLSGGERRRVEIARALAANPKFILLDEPFAGVDPISVIDIKRIIEHL 183
Query: 179 KEEGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKEERLEDVFL 233
++ G ++ + H + +C+R I+ QG +IA GT EI ++E ++ V+L
Sbjct: 184 RDSGLGVLITDHNVRETLAVCERAYIVSQGHLIAHGTP---TEILQDEHVKRVYL 235
>pir||C70529 probable ABC transporter - Mycobacterium tuberculosis (strain
H37RV) >gi|2181979|emb|CAB09479.1| (Z96072) hypothetical
protein Rv2688c [Mycobacterium tuberculosis]
Length = 301
Score = 129 bits (321), Expect = 3e-29
Identities = 78/231 (33%), Positives = 126/231 (53%), Gaps = 8/231 (3%)
Query: 1 MIIVENLRKRF--GGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKV 58
+I V L R+ + ++G+ FTV GEI+GLLGP+G+GKSTT ++L G++ D G+
Sbjct: 17 VIRVRGLTFRYPKAAEPAVRGMEFTVGRGEIFGLLGPSGAGKSTTQKLLIGLLRDHGGQA 76
Query: 59 IVGGVEVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGV-RGIPKDILEERVRKLV 117
V E A+ +G E P Y+ LT E F + G D ++ L+
Sbjct: 77 TVWDKEPAEWGPDYYERIGVSFELPNHYQKLTGYENLRFFASLYAGATADPMQ-----LL 131
Query: 118 EAFEIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYE 177
A + + L+G S G + ++ SL++DP++L LDE +GLDP +AR ++++ +
Sbjct: 132 AAVGLADDAHTLVGKYSKGMQMRLPFARSLINDPELLFLDEPTSGLDPVNARKIKDIIVD 191
Query: 178 FKEEGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKEERL 228
K G++I +TH +A A+ +CDRV + GRI+A + ELK R+
Sbjct: 192 LKARGRTIFLTTHDMATADELCDRVAFVVDGRIVALDSPTELKIARSRRRV 242
>sp|P41234|ABC2_MOUSE ATP-BINDING CASSETTE TRANSPORTER 2 >gi|1082239|pir||B54774 ATP
binding cassette transporter ABC2 - mouse (fragment)
>gi|495259|emb|CAA53531.1| (X75927) abc2 [Mus musculus]
Length = 1472
Score = 128 bits (319), Expect = 6e-29
Identities = 75/250 (30%), Positives = 134/250 (53%), Gaps = 6/250 (2%)
Query: 1 MIIVENLRKRFGGKEVLKGISF------TVKDGEIYGLLGPNGSGKSTTMRILSGIITDF 54
M+ +ENL K + +++ + ++ GE +GLLG NG+GK++T ++L+G +
Sbjct: 1087 MVKIENLTKVYKSRKIGRILAVDRLCLGVCVPGECFGLLGVNGAGKTSTFKMLTGDESTT 1146
Query: 55 EGKVIVGGVEVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVR 114
G+ V G V KD LQV++ +GY P+ + LT E +R IP + V+
Sbjct: 1147 GGEAFVNGHSVLKDLLQVQQSLGYCPQFDVPVDELTAREHLQLYTRLRCIPWKDEAQVVK 1206
Query: 115 KLVEAFEIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFREL 174
+E E+ KY ++ GT S G K+K+S +L+ P + LDE G+DPK+ R L
Sbjct: 1207 WALEKLELTKYADKPAGTYSGGNKRKLSTAIALIGYPAFIFLDEPTTGMDPKARRFLWNL 1266
Query: 175 LYEFKEEGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKEERLEDVFLK 234
+ + + G+S+V ++H + E +C R+ I+ GR+ G+++ LK + + V K
Sbjct: 1267 ILDLIKTGRSVVLTSHSMEECEALCTRLAIMVNGRLHCLGSIQHLKNRFGDGYMITVRTK 1326
Query: 235 LTQAKEEIAQ 244
+Q +++ +
Sbjct: 1327 SSQNVKDVVR 1336
Score = 113 bits (279), Expect = 3e-24
Identities = 63/222 (28%), Positives = 123/222 (55%), Gaps = 3/222 (1%)
Query: 1 MIIVENLRKRFGG--KEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKV 58
++ V+ L K + K L +S + + ++ LG NG+GK+TTM IL+G+ G
Sbjct: 26 VVCVDKLTKVYKNDKKLALNKLSLNLYENQVVSFLGHNGAGKTTTMSILTGLFPPTSGSA 85
Query: 59 IVGGVEVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVE 118
+ G ++ + ++++ +G P+ L++ LT E F ++ + ++ + + K++E
Sbjct: 86 TIYGHDIRTEMDEIRKNLGMCPQHNVLFDRLTVEEHLWFYSRLKSMAQEEIRKETDKMIE 145
Query: 119 AFEIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEF 178
E+ + L+ TLS G K+K+S+ + + + +ILDE G+DP + R +L+ ++
Sbjct: 146 DLELSNKRHSLVQTLSGGMKRKLSVAIAFVGGSRAIILDEPTAGVDPYARRAIWDLILKY 205
Query: 179 KEEGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELK 220
K G++I+ STH + A+L+ DR+ II G++ G+ LK
Sbjct: 206 K-PGRTILLSTHHMDEADLLGDRIAIISHGKLKCCGSPLFLK 246
>pir||B72582 probable nodulation ATP-binding protein APE1934 - Aeropyrum pernix
(strain K1) >gi|5105630|dbj|BAA80943.1| (AP000062) 276aa
long hypothetical nodulation ATP-binding protein
[Aeropyrum pernix]
Length = 276
Score = 128 bits (319), Expect = 6e-29
Identities = 80/228 (35%), Positives = 132/228 (57%), Gaps = 1/228 (0%)
Query: 9 KRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIVGGVEVAKD 68
K G+ VL+G+S +VK GEI+ L G NG+GK+T++R+L G+++ G+ V GV+
Sbjct: 43 KSVKGRPVLRGVSLSVKFGEIHVLAGLNGAGKTTSLRVLVGLLSRDSGEARVLGVDPWGG 102
Query: 69 PLQ-VKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAFEIKKYMN 127
+ VK VGY+PE ++YE LT E F + +D+ E + + ++ +
Sbjct: 103 GFERVKGEVGYLPEDASVYERLTGMENILFYARLYSGWRDVEELVENAVFYSGLSREDLA 162
Query: 128 QLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKEEGKSIVF 187
+ G S G K+++ L +L+ P++++LDE +G+DP ++ +++L EG++I+
Sbjct: 163 RRAGGYSKGMKRRLLLGITLMSKPRLVVLDEPTSGVDPIASNRIKKILRGLSREGRAILV 222
Query: 188 STHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKEERLEDVFLKL 235
+TH LALAE I DRV II+ G +A G L E E LED F+ +
Sbjct: 223 TTHDLALAEEIADRVTIIHGGSTVASGPPYRLVEEYCGETLEDAFVNI 270
>sp|P31220|YHBG_ECOLI PROBABLE ABC TRANSPORTER ATP-BINDING PROTEIN IN MURA-RPON
INTERGENIC REGION (ORF1) (ORF241)
>gi|2126052|pir||I60351 rpoN protein - Escherichia coli
>gi|285780|dbj|BAA02314.1| (D12938) ORF1 [Escherichia
coli] >gi|551337|gb|AAB60162.1| (U12684) orf241
[Escherichia coli]
Length = 241
Score = 128 bits (318), Expect = 7e-29
Identities = 70/235 (29%), Positives = 135/235 (56%), Gaps = 6/235 (2%)
Query: 2 IIVENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIVG 61
+ +NL K + G+ V++ +S TV GEI GLLGPNG+GK+TT ++ GI+ G +I+
Sbjct: 4 LTAKNLAKAYKGRRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPARCGNIIID 63
Query: 62 GVEVAKDPL--QVKRIVGYVPETPALYESLTPAEFFSFVGGVRG-IPKDILEERVRKLVE 118
+++ PL + +R +GY+P+ +++ L+ + V +R + + E+R +L+E
Sbjct: 64 DDDISLLPLHARARRGIGYLPQEASIFRRLSVYDNLMAVLQIRDDLSAEQREDRANELME 123
Query: 119 AFEIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEF 178
F I+ + + +LS G ++++ + +L +PK ++LDE G+DP S + ++
Sbjct: 124 EFHIEHLRDSMGQSLSGGERRRVEIARALAANPKFILLDEPFAGVDPISVIDIKRIIEHL 183
Query: 179 KEEGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKEERLEDVFL 233
++ G ++ + H + +C+R I+ QG +IA GT EI ++E ++ V+L
Sbjct: 184 RDSGLGVLITDHNVRETLAVCERAYIVSQGHLIAHGTP---TEILQDEHVKRVYL 235
>gb|AAD43475.1|AF125260_3 (AF125260) NosF [Rhodobacter sphaeroides f. sp. denitrificans]
Length = 294
Score = 128 bits (318), Expect = 7e-29
Identities = 76/220 (34%), Positives = 118/220 (53%), Gaps = 6/220 (2%)
Query: 1 MIIVENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIV 60
M+ + + + FGG L +SF V GE LLG NG+GKST M+++ G+I G++ V
Sbjct: 1 MLTLSQVTRTFGGLTALDAVSFAVAPGERVALLGHNGAGKSTLMKLVLGLIAADGGRISV 60
Query: 61 GGVEVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAF 120
GG A + + Y+PE A + +LT AE + +RG + L+E
Sbjct: 61 GGH--APGSHAARALTAYLPENAAFHPALTGAETLRYYLRLRGEDP----AKAGALLERV 114
Query: 121 EIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKE 180
+ + IGT S G +Q++ L +L+ P++L+LDE +GLDP S R F LL E
Sbjct: 115 GLGAAAQRRIGTYSKGMRQRVGLAQALIGHPRLLVLDEPTSGLDPVSRRDFYALLAELAA 174
Query: 181 EGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELK 220
+G +I+ S+H L E DR+ I+ GR++A T+ L+
Sbjct: 175 DGAAILLSSHALTEVEARTDRIAILSGGRLMANDTLANLR 214
>gb|AAK41504.1| ABC transporter, ATP binding protein [Sulfolobus solfataricus]
Length = 286
Score = 127 bits (315), Expect = 2e-28
Identities = 79/229 (34%), Positives = 133/229 (57%), Gaps = 8/229 (3%)
Query: 2 IIVENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIVG 61
I VE+LRK+F GKEVLKG+SF ++ G I G +GPNG+GK+TT++ILSG++ G V V
Sbjct: 3 IEVEDLRKKFAGKEVLKGVSFKLRSGSITGFIGPNGAGKTTTIKILSGLLRKDGGFVKVF 62
Query: 62 GVEVAKDPLQVKRIVGYVPETPALY-ESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAF 120
G + +P ++RI V T ++ + T E+ +G V G ++I + L+E F
Sbjct: 63 GEDPWDNPKVMERI--SVIFTNLIHPQENTVGEYLMDLGNVYGKKREI----INYLIEEF 116
Query: 121 EIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEF-K 179
++ ++N+ + LS G Q++ L+++L+ D +++I DE LDP F E++ E +
Sbjct: 117 KLTPHLNKRLYQLSSGLAQRVQLVAALIKDVELIIADEPTANLDPSFRIEFYEVVKELNR 176
Query: 180 EEGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKEERL 228
+ G + S+H+L+ E + V I GRI G + + ++EE +
Sbjct: 177 KNGVTFFISSHILSELEKVITDVIFINDGRITYSGRMNKALSDTEEEEI 225
>emb|CAA67415.1| (X98917) orf4 [Methanopyrus kandleri]
Length = 228
Score = 127 bits (315), Expect = 2e-28
Identities = 81/226 (35%), Positives = 136/226 (59%), Gaps = 14/226 (6%)
Query: 1 MIIVENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIV 60
M+ VE ++ +G +EVL+G+ V+ GE+ L GPNGSGKST ++I++GI+ EG+VI+
Sbjct: 1 MLRVEGVKFSYGDREVLRGVDLEVEPGEVRVLFGPNGSGKSTLLKIVAGILRPDEGRVII 60
Query: 61 GGVEVAKDPLQVKRIVGYVPETPALYESLTPAEFFSF-VGGVRGIPKDILEERVRKLVEA 119
G +V P + +R VGYVP+ PAL+ +T + ++ + RG P +R+ +LVE
Sbjct: 61 GEEDVTDLPPE-ERHVGYVPQQPALFPHMTVEDNITYSLQNGRGDP-----DRLDELVEL 114
Query: 120 FEIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLD--PKSARI--FRELL 175
+K+++++ LS G + ++SL +L DPKV++LDE ++ +D K+ + FRE+L
Sbjct: 115 LGLKEHLDRKPDELSGGYQSRVSLARALFSDPKVMLLDEPLSDVDLAVKAGLVPRFREVL 174
Query: 176 YEFKEEGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKE 221
KE G ++ TH AE I D ++ G+ + +V+E E
Sbjct: 175 ---KETGIPALYVTHDPWEAERIGDSFTVLIGGKAVDVNSVDEALE 217
>pir||T36764 probable ABC-type transport system ATP-binding protein -
Streptomyces coelicolor >gi|5531452|emb|CAB50957.1|
(AL096849) putative ABC-transporter ATP-binding protein
[Streptomyces coelicolor A3(2)]
Length = 306
Score = 127 bits (315), Expect = 2e-28
Identities = 78/247 (31%), Positives = 130/247 (52%), Gaps = 10/247 (4%)
Query: 2 IIVENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIVG 61
I VE L KR+G + +SFTV G + G GPNG+GK+T ++ + G+ G+ V
Sbjct: 13 IRVEGLTKRYGRATAVDDLSFTVGTGRVTGFFGPNGAGKTTALKAVVGLARPTAGRAFVR 72
Query: 62 GVEVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAFE 121
G VA R++G E + T + + G+P+ RV +++E
Sbjct: 73 GTPVAALKPDA-RLLGVHIEPCGAHPGRTGRAHLRSLAALAGLPR----RRVGEVLELVG 127
Query: 122 IKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKEE 181
+++ +G S G +Q++ L ++LL DP++L+LDE +NGLDP+ R R LL E +
Sbjct: 128 LEEAARGRVGKYSMGMRQRLGLAAALLGDPEILVLDEPVNGLDPQGIRWLRTLLRERAAK 187
Query: 182 GKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKEERLEDVFLKLTQAKEE 241
G +++ S+H+L A D V +I +GR++ EG + +L E E V T E
Sbjct: 188 GGTVLLSSHMLGEAAQTVDDVVVINRGRLVHEGAIRDL-----ERSGERVVAVRTAEAER 242
Query: 242 IAQVVSA 248
++++V+A
Sbjct: 243 LSELVTA 249
>gi|9506365 ATP-binding cassette, sub-family A (ABC1), member 7 [Homo sapiens]
>gi|9211112|gb|AAF85794.1|AF250238_1 (AF250238)
macrophage ABC transporter [Homo sapiens]
Length = 2146
Score = 126 bits (314), Expect = 2e-28
Identities = 65/222 (29%), Positives = 121/222 (54%), Gaps = 2/222 (0%)
Query: 1 MIIVENLRKRFGGKEV--LKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKV 58
++++ NL K + G+ + + + + GE +GLLG NG+GK++T R+++G G+
Sbjct: 1792 VLVLRNLTKVYRGQRMPAVDRLCLGIPPGECFGLLGVNGAGKTSTFRMVTGDTLASRGEA 1851
Query: 59 IVGGVEVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVE 118
++ G VA++P +GY P++ A++E LT E + +RG+P+ + + +
Sbjct: 1852 VLAGHSVAREPSAAHLSMGYCPQSDAIFELLTGREHLELLARLRGVPEAQVAQTAGSGLA 1911
Query: 119 AFEIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEF 178
+ Y ++ GT S G K+K++ +L+ DP V+ LDE G+DP + R L
Sbjct: 1912 RLGLSWYADRPAGTYSGGNKRKLATALALVGDPAVVFLDEPTTGMDPSARRFLWNSLLAV 1971
Query: 179 KEEGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELK 220
EG+S++ ++H + E +C R+ I+ GR G+ + LK
Sbjct: 1972 VREGRSVMLTSHSMEECEALCSRLAIMVNGRFRCLGSPQHLK 2013
Score = 112 bits (278), Expect = 4e-24
Identities = 69/216 (31%), Positives = 117/216 (53%), Gaps = 3/216 (1%)
Query: 2 IIVENLRKRFGG--KEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVI 59
+ V +L KRF G + L+G+S G I LG NG+GK+TT+ ILSG+ G
Sbjct: 807 VSVRSLEKRFPGSPQPALRGLSLDFYQGHITAFLGHNGAGKTTTLSILSGLFPPSGGSAF 866
Query: 60 VGGVEVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEA 119
+ G +V ++ +G P+ L++ LT E F G ++G+ ++ +L++
Sbjct: 867 ILGHDVRSSMAAIRPHLGVCPQYNVLFDMLTVDEHVWFYGRLKGLSAAVVGPEQDRLLQD 926
Query: 120 FEIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFK 179
+ + LS G ++K+S+ + + +V+ILDE G+DP S R ELL +++
Sbjct: 927 VGLVSKQSVQTRHLSGGMQRKLSVAIAFVGGSQVVILDEPTAGVDPASRRGIWELLLKYR 986
Query: 180 EEGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGT 215
EG++++ STH L AEL+ DRV ++ GR+ G+
Sbjct: 987 -EGRTLILSTHHLDEAELLGDRVAVVAGGRLCCCGS 1021
>dbj|BAB04537.1| (AP001509) bacitracin ABC transporter (ATP-binding protein)
[Bacillus halodurans]
Length = 314
Score = 126 bits (314), Expect = 2e-28
Identities = 69/226 (30%), Positives = 121/226 (53%), Gaps = 4/226 (1%)
Query: 1 MIIVENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIV 60
+I NL K F GKE++ ++ V GEIYG LGPNG+GK+T M++L + G++ +
Sbjct: 4 VITTRNLTKTFQGKEIISNLNLHVNKGEIYGFLGPNGAGKTTVMKMLMNFVKPSAGEIEL 63
Query: 61 GGVEVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAF 120
G + ++ + +G + E P YE L+ E G K + + +E
Sbjct: 64 FGQRLTSQSYEMLKRIGSMIEFPIFYEKLSARENLELHCEYMGYYK---PSAIEEALEMV 120
Query: 121 EIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEF-K 179
+++ ++ + S G KQ++ + ++ P++LILDE +NGLDP + R+L
Sbjct: 121 KLQLTGSKAVKDFSLGMKQRLGIARAICTKPELLILDEPINGLDPVGIKEIRQLFQTLCN 180
Query: 180 EEGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKE 225
E G +I+ S+H+L+ E I D VG+I G ++AE +++++ E
Sbjct: 181 EYGVTILISSHILSEIEQIADTVGVIRNGMLVAEVALDDIRSQQTE 226
>gi|11427664 ATP-binding cassette, sub-family A (ABC1), member 7 [Homo sapiens]
Length = 2146
Score = 126 bits (314), Expect = 2e-28
Identities = 65/222 (29%), Positives = 121/222 (54%), Gaps = 2/222 (0%)
Query: 1 MIIVENLRKRFGGKEV--LKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKV 58
++++ NL K + G+ + + + + GE +GLLG NG+GK++T R+++G G+
Sbjct: 1792 VLVLRNLTKVYRGQRMPAVDRLCLGIPPGECFGLLGVNGAGKTSTFRMVTGDTLASRGEA 1851
Query: 59 IVGGVEVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVE 118
++ G VA++P +GY P++ A++E LT E + +RG+P+ + + +
Sbjct: 1852 VLAGHSVAREPSAAHLSMGYCPQSDAIFELLTGREHLELLARLRGVPEAQVAQTAGSGLA 1911
Query: 119 AFEIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEF 178
+ Y ++ GT S G K+K++ +L+ DP V+ LDE G+DP + R L
Sbjct: 1912 RLGLSWYADRPAGTYSGGNKRKLATALALVGDPAVVFLDEPTTGMDPSARRFLWNSLLAV 1971
Query: 179 KEEGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELK 220
EG+S++ ++H + E +C R+ I+ GR G+ + LK
Sbjct: 1972 VREGRSVMLTSHSMEECEALCSRLAIMVNGRFRCLGSPQHLK 2013
Score = 112 bits (278), Expect = 4e-24
Identities = 69/216 (31%), Positives = 117/216 (53%), Gaps = 3/216 (1%)
Query: 2 IIVENLRKRFGG--KEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVI 59
+ V +L KRF G + L+G+S G I LG NG+GK+TT+ ILSG+ G
Sbjct: 807 VSVRSLEKRFPGSPQPALRGLSLDFYQGHITAFLGHNGAGKTTTLSILSGLFPPSGGSAF 866
Query: 60 VGGVEVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEA 119
+ G +V ++ +G P+ L++ LT E F G ++G+ ++ +L++
Sbjct: 867 ILGHDVRSSMAAIRPHLGVCPQYNVLFDMLTVDEHVWFYGRLKGLSAAVVGPEQDRLLQD 926
Query: 120 FEIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFK 179
+ + LS G ++K+S+ + + +V+ILDE G+DP S R ELL +++
Sbjct: 927 VGLVSKQSVQTRHLSGGMQRKLSVAIAFVGGSQVVILDEPTAGVDPASRRGIWELLLKYR 986
Query: 180 EEGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGT 215
EG++++ STH L AEL+ DRV ++ GR+ G+
Sbjct: 987 -EGRTLILSTHHLDEAELLGDRVAVVAGGRLCCCGS 1021
>pir||T29454 ABC transport protein - Streptomyces coelicolor
>gi|3367766|emb|CAA20091.1| (AL031155) ABC transporter
ATP-binding protein [Streptomyces coelicolor A3(2)]
Length = 312
Score = 126 bits (313), Expect = 3e-28
Identities = 73/221 (33%), Positives = 120/221 (54%), Gaps = 9/221 (4%)
Query: 1 MIIVENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIV 60
MI L KR+G K + G+ F VK G + G LGPNG+GKSTTMR++ G+ G V V
Sbjct: 1 MIEARRLTKRYGEKTAVDGLDFVVKPGTVTGFLGPNGAGKSTTMRLIVGLDAPTSGSVTV 60
Query: 61 GGVEVA--KDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVE 118
G A + PLQ VG + E +++ + + GIP RV +++
Sbjct: 61 NGHPYAHHRAPLQE---VGALLEAKSIHPGRSAYNHLKALALTHGIPGS----RVDEVIG 113
Query: 119 AFEIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEF 178
+ + G S G Q++ + ++LL DP+ ++LDE +NGLDP+ R LL
Sbjct: 114 LAGLDNVAKKRAGAFSLGMGQRLGIAAALLGDPQTVMLDEPVNGLDPEGVLWIRNLLKGL 173
Query: 179 KEEGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEEL 219
++G+++ S+H+++ L+ D + I+ +GR++A+ TV +L
Sbjct: 174 ADQGRTVFVSSHLMSEMALVADHLIIVGRGRLLADTTVADL 214
>dbj|BAB07200.1| (AP001518) ABC transporter (ATP-binding protein) [Bacillus
halodurans]
Length = 338
Score = 125 bits (312), Expect = 4e-28
Identities = 78/259 (30%), Positives = 146/259 (56%), Gaps = 9/259 (3%)
Query: 1 MIIVENLRKRFGGKE----VLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEG 56
MI ++ +RK F K + G++ + +GEI+G++G +G+GKST +R+L+ + EG
Sbjct: 1 MISLDGIRKVFKAKRGSVTAVDGVNLKINEGEIFGVIGYSGAGKSTLIRMLNMLERPTEG 60
Query: 57 KVIVGGVEVAK---DPLQVKRI-VGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEER 112
VIV G +++K L+++R +G + + L S T + +F + G+PK E+R
Sbjct: 61 SVIVAGKDLSKLSDRDLRIERQKIGMIFQHFNLLWSRTVRKNIAFPLEIAGVPKKEREKR 120
Query: 113 VRKLVEAFEIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFR 172
V +L+ ++ LS G KQ++ + +L ++PKVL+ DEA + LDPK+
Sbjct: 121 VDELINLVGLEGREEAYPSQLSGGQKQRVGIARALANNPKVLLCDEATSALDPKTTDSIL 180
Query: 173 ELLYEFKEE-GKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKEERLEDV 231
+LL + E+ G +IV TH + + IC RV ++ G+++ EG V ++ KE ++
Sbjct: 181 DLLVDINEKLGLTIVLITHEMHVIRKICHRVAVMEAGKVVEEGPVLDVFRKPKEHITKEF 240
Query: 232 FLKLTQAKEEIAQVVSALK 250
++T+ +E + +++ +K
Sbjct: 241 VKQVTEPEETVQHLLNEVK 259
>emb|CAB88835.1| (AL353832) putative ABC-transport protein, ATP-binding component.
[Streptomyces coelicolor A3(2)]
Length = 354
Score = 125 bits (311), Expect = 5e-28
Identities = 70/211 (33%), Positives = 123/211 (58%), Gaps = 2/211 (0%)
Query: 19 GISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIVGGVEVAKDPLQVKRIVGY 78
G+SFTV GE+ G +GPNG+GKSTT+++L+GI+T G++ V G++ +++ +++ +G
Sbjct: 68 GLSFTVSRGEMVGYIGPNGAGKSTTIKMLTGILTPSGGRLRVAGIDPSRERIRLAHRIGV 127
Query: 79 V-PETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAFEIKKYMNQLIGTLSFGT 137
V + L+ L + + + + IP E + + VE ++++ ++ + LS G
Sbjct: 128 VFGQRTTLWWDLPLIDSYRLMHRMYRIPDARYRENLDRCVELLQLQELLDVPVRQLSLGQ 187
Query: 138 KQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFK-EEGKSIVFSTHVLALAE 196
+ + + ++LLHDP+VL LDE GLD S R L + E G +++ +TH L E
Sbjct: 188 RMRGDIAAALLHDPEVLYLDEPTIGLDVVSKAKVRGFLLDLNAERGTTVLLTTHDLQDIE 247
Query: 197 LICDRVGIIYQGRIIAEGTVEELKEISKEER 227
+C RV +I GR++ +G +E L E + ER
Sbjct: 248 QLCSRVMVIDHGRLMYDGRLEGLHEAGESER 278
>gb|AAF50837.1| (AE003568) CG1718 gene product [Drosophila melanogaster]
Length = 1713
Score = 125 bits (310), Expect = 6e-28
Identities = 66/218 (30%), Positives = 127/218 (57%), Gaps = 1/218 (0%)
Query: 4 VENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIVGGV 63
+ +L+KRFG K V+KG+S + + EI LLG NG+GK+TT+ +L+G+ G I+ G
Sbjct: 518 MRHLKKRFGNKMVVKGLSMNMFEDEITVLLGHNGAGKTTTISMLTGMFPPTSGTAIINGS 577
Query: 64 EVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAFEIK 123
++ + + +G P+ L++ ++ + F ++G+ +E+ V K ++ E++
Sbjct: 578 DIRTNIEGARMSLGICPQHNVLFDEMSVSNHIRFFSRMKGLRGKAVEQEVAKYLKMIELE 637
Query: 124 KYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKEEGK 183
N LS G K+K+S+ +L D KV++ DE +G+DP + R +LL + ++ G+
Sbjct: 638 DKANVASSKLSGGMKRKLSVCCALCGDTKVVLCDEPSSGMDPSARRQLWDLLQQ-EKVGR 696
Query: 184 SIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKE 221
+++ +TH + A+++ DR+ I+ G + +GT LK+
Sbjct: 697 TLLLTTHFMDEADVLGDRIAIMCDGELKCQGTSFFLKK 734
Score = 119 bits (296), Expect = 3e-26
Identities = 67/251 (26%), Positives = 131/251 (51%), Gaps = 9/251 (3%)
Query: 2 IIVENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIVG 61
++++ + K +G + +S V++ E +GLLG NG+GK+TT ++++G G V
Sbjct: 1368 LVLDRVTKYYGQFMAVNQVSLCVQEVECFGLLGVNGAGKTTTFKMMTGDERISSGAAYVQ 1427
Query: 62 GVEVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAFE 121
G+ + + + +++GY P+ AL + LT E +RG+ + + + L ++F
Sbjct: 1428 GLSLESNMNSIYKMIGYCPQFDALLDDLTGREVLRIFCMLRGVQESRIRQLSEDLAKSFG 1487
Query: 122 IKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKEE 181
K++++ S G K+K+S +++ P V+ LDE G+DP + R ++ ++
Sbjct: 1488 FMKHIDKQTHAYSGGNKRKLSTAIAVIGSPSVIYLDEPTTGMDPAARRQLWNMVCRIRDS 1547
Query: 182 GKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKEERLEDVFLKLTQAKEE 241
GKSIV ++H + E +C R+ I+ G E K I + L++ F K K +
Sbjct: 1548 GKSIVLTSHSMEECEALCTRLAIMVNG---------EFKCIGSTQHLKNKFSKGLILKIK 1598
Query: 242 IAQVVSALKEA 252
+ + + AL++A
Sbjct: 1599 VRRNLEALRQA 1609
>pir||H75288 ABC transporter, ATP-binding protein - Deinococcus radiodurans
(strain R1) >gi|6460124|gb|AAF11860.1|AE002063_3
(AE002063) ABC transporter, ATP-binding protein
[Deinococcus radiodurans]
Length = 327
Score = 124 bits (309), Expect = 8e-28
Identities = 71/221 (32%), Positives = 125/221 (56%), Gaps = 6/221 (2%)
Query: 1 MIIVENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGII--TDFEGKV 58
+I LRK + + V+ G++ TV GE++G LGPNG+GKSTT+++L G++ + E +V
Sbjct: 15 VIETRELRKVYRDRAVVDGLTLTVGAGEVFGFLGPNGAGKSTTVKMLLGLVIPSGGEARV 74
Query: 59 IVGGVEVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVE 118
+ G DP V+ +G++PE +T EF +F G + G+ + L RV +++E
Sbjct: 75 LCGS---PADPA-VRARLGFLPEQFRFQLWMTAEEFLNFHGQLAGMKSNELRTRVPQVLE 130
Query: 119 AFEIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEF 178
+ + + S G Q+ L ++L P+++ LDE + LDP RE++
Sbjct: 131 EVGLGGRGGEQLSGYSKGMLQRCGLAGAILARPQLVFLDEPTSALDPIGRVEVREIIERL 190
Query: 179 KEEGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEEL 219
K EG ++ ++H+L+ E +CDRV + GR++ +G++ EL
Sbjct: 191 KGEGVAVFLNSHLLSEVEQVCDRVAFVKAGRVLQQGSMREL 231
>pir||T18288 ABC transport protein - slime mold (Dictyostelium discoideum)
(fragment) >gi|1513298|gb|AAB06789.1| (U66526) AbcA
[Dictyostelium discoideum]
Length = 1336
Score = 123 bits (307), Expect = 1e-27
Identities = 68/231 (29%), Positives = 124/231 (53%), Gaps = 1/231 (0%)
Query: 17 LKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIVGGVEVAKDPLQVKRIV 76
+K +S +V+ G I G LG NG GKSTT+ +L+G++ G +V G V + V+RI
Sbjct: 401 VKYLSLSVEKGTILGFLGSNGCGKSTTIGMLTGLLEPTAGDALVYGHSVISNIAAVRRIT 460
Query: 77 GYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAFEIKKYMNQLIGTLSFG 136
VP+ L+ +T E ++GIP E +++K+++ + K N LI T S G
Sbjct: 461 SVVPQHDILWAEMTAREHLQLFSELKGIPAQERESQIQKVLDQVRLSKISNNLISTYSGG 520
Query: 137 TKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKEEGKSIVFSTHVLALAE 196
K+++S+ + + DPK++ +DE G+DP S R +L+ K + K I+ ++H + E
Sbjct: 521 MKRRLSVAIACIGDPKIIFMDEPTTGVDPSSKRHLIDLVKSIKND-KVIILTSHDMHEVE 579
Query: 197 LICDRVGIIYQGRIIAEGTVEELKEISKEERLEDVFLKLTQAKEEIAQVVS 247
++ D++ I+ +G + G +LK E ++ K ++ + + V+
Sbjct: 580 ILADKIVIMNEGVMACNGNSLQLKSKYGEGYSVNIVAKSPESIPAVVEFVT 630
>pir||D75609 amino acid ABC transporter, ATP-binding protein - Deinococcus
radiodurans (strain R1)
>gi|6460517|gb|AAF12223.1|AE001862_49 (AE001862) amino
acid ABC transporter, ATP-binding protein [Deinococcus
radiodurans]
Length = 309
Score = 123 bits (307), Expect = 1e-27
Identities = 76/223 (34%), Positives = 125/223 (55%), Gaps = 4/223 (1%)
Query: 1 MIIVENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIV 60
MI +N+ K FGG VL+ IS TV GE+ L+GP+G GKST +R+++ ++ G + V
Sbjct: 1 MIEFQNVIKSFGGPAVLQDISLTVPTGELVILIGPSGCGKSTLLRLVNRLLEPTSGDIRV 60
Query: 61 GGVEV-AKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVE- 118
GGV V +DP+ ++R +GYV ++ L+ LT E V + G+ ++ R +L+
Sbjct: 61 GGVSVLEQDPVALRRRLGYVIQSVGLFPHLTVQENVELVPSISGVGRETRAARALELLSL 120
Query: 119 -AFEIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDP-KSARIFRELLY 176
E +Y + LS G +Q++ + +L DP+ L++DE + LDP AR+ + L
Sbjct: 121 MGLEPGQYAGRYPRQLSGGQQQRVGIARALAADPEYLLMDEPFSALDPITRARLQEQFLT 180
Query: 177 EFKEEGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEEL 219
+E GK+IVF TH + A + DR+ ++ G + EE+
Sbjct: 181 LKREIGKTIVFVTHDVDEAVRLGDRICVLGNGTVQQYAAPEEI 223
>emb|CAC11868.1| (AL445065) ATP-binding protein related resistance protein
[Thermoplasma acidophilum]
Length = 319
Score = 123 bits (307), Expect = 1e-27
Identities = 67/219 (30%), Positives = 120/219 (54%)
Query: 1 MIIVENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIV 60
++ V NL K + G ++ S ++ G I+ LLG NG+GKSTTM+ ++G++ ++
Sbjct: 6 LLEVRNLSKIYPGGSGVRNASIKIRYGSIHALLGNNGAGKSTTMKCITGLLEPDSIEISF 65
Query: 61 GGVEVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAF 120
G + +K+ +GYVPE PA + T + G + G+ K R +V
Sbjct: 66 RGTTYPWNSKDLKKHIGYVPELPAFPKVFTVHDCIVSYGRMMGLGKAEAVGRAMPIVSIL 125
Query: 121 EIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKE 180
++++M + + +LS G QK+ ++ +LL DP V+I+DE GLD + ++ ++
Sbjct: 126 GLEEHMKKRVSSLSRGMLQKLDIVIALLSDPDVIIMDEPTAGLDVSAVEELFGIIRSLRD 185
Query: 181 EGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEEL 219
GKSI+ S+H L E I D V ++ G +I +G++++L
Sbjct: 186 RGKSILISSHQLRDIETISDSVTVMDSGHVIFDGSIKDL 224
>pir||F71654 ABC transporter ATP-binding protein (abcT2) RP508 - Rickettsia
prowazekii >gi|3861060|emb|CAA14960.1| (AJ235272) ABC
TRANSPORTER ATP-BINDING PROTEIN (abcT2) [Rickettsia
prowazekii]
Length = 254
Score = 123 bits (306), Expect = 2e-27
Identities = 62/232 (26%), Positives = 133/232 (56%), Gaps = 5/232 (2%)
Query: 4 VENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIVGGV 63
++N+ K + + +L IS +K GEI GL GPNG+GK+T I+ G++ G++++ +
Sbjct: 20 IKNISKSYKKRNILTDISLHIKQGEIVGLFGPNGAGKTTCFNIIIGLMRPDSGQLLLNDI 79
Query: 64 EVAKDP--LQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAFE 121
+ P L+ + +GY+ + P+++ L+ A+ V + K+++E++ L+E F
Sbjct: 80 NITNLPIYLRARLGIGYLLQEPSIFRGLSVADNIKAVVEISENDKEVIEQKTHNLLEKFS 139
Query: 122 IKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKEE 181
I + +LS G ++++ + S + +PK ++LDE + G+DP + ++L+ +E
Sbjct: 140 IVHLKDLSSASLSGGERRRLEIARSFVIEPKFIMLDEPLAGIDPLAISDIKKLITYLREF 199
Query: 182 GKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKEERLEDVFL 233
I+ + H + I DR +I++G+++ EG+ + EI+ +++++V+L
Sbjct: 200 NIGILITDHNVRDTLDIVDRAYVIFEGKVLLEGSAQ---EIANSKKVKEVYL 248
>pir||T22748 hypothetical protein F55G11.9 - Caenorhabditis elegans
>gi|3877692|emb|CAB05222.1| (Z82272) predicted using
Genefinder~contains similarity to Pfam domain: PF00005
(ABC transporter), Score=329.9, E-value=9.1e-96, N=2
[Caenorhabditis elegans]
Length = 1431
Score = 123 bits (306), Expect = 2e-27
Identities = 71/249 (28%), Positives = 135/249 (53%), Gaps = 8/249 (3%)
Query: 1 MIIVENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIV 60
++++ L K FG + G+S TV E +G+LG NG+GK+TT I++G+ G+V +
Sbjct: 1128 ILVINGLIKDFGKFRAVNGLSVTVDHEECFGMLGANGAGKTTTFDIITGLTMPTGGRVTI 1187
Query: 61 GGVEVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAF 120
G ++++ +GY P+ A+ + ++ E + +G + E V +++
Sbjct: 1188 DGHDISR-----TIHIGYCPQFDAMLQQISCRETLMIMAKFQGYAN--VSEVVDLVLDCV 1240
Query: 121 EIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKE 180
+ + N+L+ S G K+KIS+ +L+ +ILDE G+DP++ R ++++E +E
Sbjct: 1241 GMADFGNKLVKNCSGGQKRKISVGIALMSRATCIILDEPTAGIDPRARREIWDIIHEMRE 1300
Query: 181 EGK-SIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKEERLEDVFLKLTQAK 239
+ K SIV ++H + E +C R+GI+ G +IA GT + LK + + L + +
Sbjct: 1301 QAKCSIVLTSHSMEECEALCTRIGILRNGEMIALGTSQSLKSQYGNTYMMTLILNKLEDR 1360
Query: 240 EEIAQVVSA 248
+ + Q+V A
Sbjct: 1361 KSVCQIVKA 1369
Score = 112 bits (278), Expect = 4e-24
Identities = 62/209 (29%), Positives = 115/209 (54%), Gaps = 1/209 (0%)
Query: 13 GKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIVGGVEVAKDPLQV 72
G++ + G+S G++ LLG NG GKSTT +++G+ EG+VI+GG++
Sbjct: 459 GEKAVNGLSLRAIRGQVSILLGHNGCGKSTTFGMITGMHKATEGRVIIGGIDANSHRAAA 518
Query: 73 KRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAFEIKKYMNQLIGT 132
++++GY P+ LY+ LT E V ++G K + L++ E+ + L
Sbjct: 519 RKMIGYCPQYNPLYDKLTVMEHLKLVNALKGGSKLTFKVEADSLLQQIELTDKRDTLAKN 578
Query: 133 LSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKEEGKSIVFSTHVL 192
LS G K+K+ + +++ +V++LDE G+DP SARI + + + ++I+ +TH +
Sbjct: 579 LSGGMKRKLCVCMAMIGGSRVILLDEPTAGMDP-SARIDVQRMLALVKADRTILLTTHYM 637
Query: 193 ALAELICDRVGIIYQGRIIAEGTVEELKE 221
AE + D + ++ G++ A G+ LK+
Sbjct: 638 DEAEKLGDWIFVMSHGKMAASGSNHYLKQ 666
>gb|AAB61132.1| (U61158) GdmF [Staphylococcus gallinarum]
Length = 231
Score = 123 bits (305), Expect = 2e-27
Identities = 72/237 (30%), Positives = 128/237 (53%), Gaps = 15/237 (6%)
Query: 2 IIVENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIVG 61
I + L K+F + +LK I+ V E+YGLLG NG+GKST M+I+ GI+ G V +
Sbjct: 6 IETQKLTKQFKKETILKDINLKVYPNEVYGLLGINGAGKSTLMKIICGILPQTNGDVYLD 65
Query: 62 GVEVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAFE 121
G + + L +G + E+P Y L+ + V + ++I + K+++
Sbjct: 66 GSPLTRQELTN---IGSLIESPPTYNHLSAQDNLKVVA----LNENIDFSEIPKVLDLVN 118
Query: 122 IKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKEE 181
+ + + S G KQ++ + +L+ PK+L+LDE NGLDP + R+LL +
Sbjct: 119 LDVDPKKKVKNFSLGMKQRLGIAMALIKKPKLLVLDEPSNGLDPYGIQELRDLLKNLTKA 178
Query: 182 GKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISK-EERLEDVFLKLTQ 237
S++ S+H+L+ + + D +GII+ G++ E +E +K +E LE++F +T+
Sbjct: 179 NTSVIISSHILSEIQQLADHIGIIHNGKL-------EYQEKNKTDENLEEIFFNITK 228
>gb|AAC44025.1| (U47133) NosF protein [Sinorhizobium meliloti]
>gi|1588788|prf||2209347D nosF gene [Rhizobium meliloti]
Length = 304
Score = 122 bits (304), Expect = 3e-27
Identities = 81/238 (34%), Positives = 135/238 (56%), Gaps = 11/238 (4%)
Query: 4 VENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIVGGV 63
+ + K +G V++ ISF + E L+G NG+GK+T ++++ G+I +G V V G
Sbjct: 7 IAGVSKCYGDSTVVRDISFGLGAAETVALVGHNGAGKTTLIKLMLGLIRPTKGLVRVLGE 66
Query: 64 EVAKDPLQVKRIVGYVPETPALYESLTPAE---FFSFVGGVRGIPKDILEERVRKLVEAF 120
A V++ +GY+PE+ + +LT E F++ + V G L ERV EA
Sbjct: 67 NPATGDFAVRQRLGYLPESVSFNMALTGRETLRFYARLKQVDGAATGDLFERVGLAQEA- 125
Query: 121 EIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKE 180
+++ + T S G +Q++ L +LL P++L+LDE +GLDP R F EL+ E +
Sbjct: 126 -----VDRPVRTYSKGMRQRLGLAQALLGMPRILLLDEPTSGLDPALRRNFYELITELRA 180
Query: 181 EGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKEERLEDVFLKLTQA 238
+G +++ S+H L E DRV I+ +G IA+GT+E+L+ I++ + LKL+QA
Sbjct: 181 KGTTVLLSSHALTELEGRADRVIIVNKGVKIADGTLEQLRRIARLP--TRISLKLSQA 236
>gb|AAB08067.1| (U67179) ORF2 [Xanthomonas campestris]
Length = 239
Score = 122 bits (304), Expect = 3e-27
Identities = 66/222 (29%), Positives = 126/222 (56%), Gaps = 3/222 (1%)
Query: 1 MIIVENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIV 60
M++ LRK++ +EV+K T++ GE+ GLLGPNG+GK+T ++ G++ G++ +
Sbjct: 1 MLVATGLRKKYKQREVVKEFGLTLEAGEVVGLLGPNGAGKTTCFYMIVGLVEADAGRIEL 60
Query: 61 GGVEVAKDPL--QVKRIVGYVPETPALYESLTPAEFFSFVGGVRG-IPKDILEERVRKLV 117
G ++ +P+ + K VGY+P+ P+++ LT A+ V +R + E+ + L+
Sbjct: 61 DGRDLTAEPMYARAKLGVGYLPQEPSIFRKLTVADNIRLVLELREELDNAGREKELVSLL 120
Query: 118 EAFEIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYE 177
E +I +QL +LS G +++ + +L P++++LDE G+DP S + ++
Sbjct: 121 EELQITHVADQLGASLSGGERRRCEIARALAAKPRMMLLDEPFAGVDPISVGEIQRIIIH 180
Query: 178 FKEEGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEEL 219
KE G ++ + H + ICDR I+ +G ++A+G + L
Sbjct: 181 LKERGIGVLITDHNVRETLGICDRAYILAEGGVLAQGAPDTL 222
>gb|AAF44814.1|AE003406_19 (AE003416) symbol=BG:DS00797.5; prediction=method:''genscan'',
version:''1.0; Date run: 19-Nov-98; Time: 17:00:23'',
score:''296.08''; cDNA=method:''sim4'', score:''990.0'',
desc:''CK01017 Drosophila melanogaster embryo BlueScript,
full length mRNA seq>
Length = 1544
Score = 122 bits (304), Expect = 3e-27
Identities = 64/228 (28%), Positives = 125/228 (54%), Gaps = 6/228 (2%)
Query: 2 IIVENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIVG 61
+IV NLRKR+G K + G+SF GE +GLLG NG+GK++T ++++ + G + +
Sbjct: 1202 LIVHNLRKRYGDKLAVDGVSFAAAQGECFGLLGVNGAGKTSTFQMIAANLPLDGGTIRIK 1261
Query: 62 GVEVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPK------DILEERVRK 115
G ++ + L+ + GY P+ AL + +T + ++ +RG+ + +E V+
Sbjct: 1262 GADIREHELKYREYFGYCPQYDALNKFMTAEQCLYYMALLRGLSRRRTDGPASCKEHVKY 1321
Query: 116 LVEAFEIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELL 175
+E + KY + S GTK+K+ +++ P +++LDE G+DP S R + +
Sbjct: 1322 WLEKMHLTKYQKVQVRHYSGGTKRKLLAAMAMIGAPALVLLDEPTTGVDPISRRFLWQCI 1381
Query: 176 YEFKEEGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEIS 223
+F+ + +++V ++H + E +C+R+ I+ G+ + LK +S
Sbjct: 1382 KDFQGKDRTVVLTSHSMDECEELCNRLAIMAHGKFKCLNNICALKRLS 1429
Score = 96.7 bits (237), Expect = 2e-19
Identities = 70/254 (27%), Positives = 132/254 (51%), Gaps = 17/254 (6%)
Query: 2 IIVENLRKRFGGKE----VLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGK 57
II+ L K+F + + ++ T+ + EI LLG NG+GK+T M ++ G++ GK
Sbjct: 408 IIITELCKKFQTSKRDTLISDNLNMTINNKEITVLLGHNGAGKTTMMNMIMGLVPKDSGK 467
Query: 58 VIVGGVEVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGI----PKDILEERV 113
+IV +D + ++G+ P+ +T + F +RG +D +E++
Sbjct: 468 IIVCS---ERDVASYRHLIGFCPQHSVFMSYMTCHQHLEFFAQLRGACRSDARDWADEKL 524
Query: 114 RKLVEAFEIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRE 173
+KL + N+ LS G K+++SL ++ + K++ILDE +GLD S R +
Sbjct: 525 KKL----GLSDKRNEFGKNLSGGMKRRLSLGIAIAGNTKIVILDEPSSGLDINSRRELWD 580
Query: 174 LLYEFKEEGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISK-EERLEDVF 232
+L ++E K+++ +TH + AE++ D + I+ G++ + G+ ELK S RL+
Sbjct: 581 ILLNLRKE-KAVLVTTHYMEEAEVLGDTICILANGKLQSIGSPLELKRKSGIGYRLKLEI 639
Query: 233 LKLTQAKEEIAQVV 246
T + EI +++
Sbjct: 640 NDFTSREVEIMEII 653
>emb|CAB94566.1| (AL359152) putative ABC transporter ATP-binding subunit
[Streptomyces coelicolor A3(2)]
Length = 346
Score = 122 bits (304), Expect = 3e-27
Identities = 72/220 (32%), Positives = 119/220 (53%), Gaps = 9/220 (4%)
Query: 1 MIIVENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIV 60
MI +E L KR+G K + +SFTV+ G I G LGPNG+GKSTTMR++ G+ G V +
Sbjct: 17 MIELEGLTKRYGEKVAVNNLSFTVRPGIITGFLGPNGAGKSTTMRMVLGLDRPTAGDVRI 76
Query: 61 GG--VEVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVE 118
G + KDPL +G + E A + + + GIP RVR++++
Sbjct: 77 DGKHYDELKDPLTY---IGALLEAKAWHGGRSAYNHLLCLAQSNGIPAS----RVRQVLD 129
Query: 119 AFEIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEF 178
+ + S G Q++ + +LL DP++L+ DE +NGLDP+ R L+
Sbjct: 130 TVGLSAVARKKTKGFSLGMGQRLGIAGALLGDPRILMFDEPVNGLDPEGIHWIRNLMKTL 189
Query: 179 KEEGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEE 218
+G+++ S+H+++ L D + +I QGR++A+ ++ E
Sbjct: 190 ASQGRTVFVSSHLMSEMALTADHLVVIGQGRLLADTSMAE 229
>pir||T45265 cobalt transport ATP-binding protein O homolog [imported] -
Methanobacterium thermoautotrophicum
>gi|1419078|emb|CAA63958.1| (X94292) cbiO
[Methanobacterium thermoautotrophicum]
Length = 277
Score = 122 bits (303), Expect = 4e-27
Identities = 84/223 (37%), Positives = 121/223 (53%), Gaps = 10/223 (4%)
Query: 1 MIIVENLRKRF---GGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGK 57
M I+E + R+ G E LKGI F K GE+ LLGPNG+GKST +GI+ GK
Sbjct: 1 MKIIEAVNIRYTYPDGTEALKGIDFHAKKGEVVALLGPNGAGKSTLFLHFNGILQPTSGK 60
Query: 58 VIVGGVEVAKDP---LQVKRIVGYVPETPALYESLTPA--EFFSFVGGVRGIPKDILEER 112
V+V G E+ ++V++ VG V + P + P E +F G+ +D +EER
Sbjct: 61 VLVDGKEIDYSKSGLIKVRQKVGIVFQNPD-DQLFAPRVDEDVAFGPLNMGLDEDEVEER 119
Query: 113 VRKLVEAFEIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFR 172
V+ + + LS G K+++++ L P ++ILDE +GLDP+ A
Sbjct: 120 VKDALRKVGMSGTRTDP-HHLSGGEKKRVAIAGILAMKPDIMILDEPTSGLDPRGASQIL 178
Query: 173 ELLYEFKEEGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGT 215
LL+E EEG +I+ STH + LA L DR+ II G II+EGT
Sbjct: 179 RLLHELNEEGMTIIISTHDVDLAPLYSDRIYIISGGEIISEGT 221
>sp|P75444|YD34_MYCPN HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PROTEIN MPN334
(F10_ORF326) >gi|2146182|pir||S73828 hypothetical
protein bcrA - Mycoplasma pneumoniae (strain ATCC 29342)
>gi|1674195|gb|AAB96150.1| (AE000049) ABC transporter
ATP-binding protein [Mycoplasma pneumoniae]
Length = 326
Score = 122 bits (303), Expect = 4e-27
Identities = 70/229 (30%), Positives = 124/229 (53%), Gaps = 9/229 (3%)
Query: 1 MIIVENLRKRFG---GKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGK 57
++ V++L K FG +LK ++F + GE + +G NG+GK+TT++ L F+ +
Sbjct: 6 IVEVKHLEKEFGFWRKNRILKDVNFAIMPGEFHAFIGQNGAGKTTTIKCLISSYQRFKDE 65
Query: 58 VIVGGVEVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLV 117
+ + G+ + + K ++ Y+PE + L E+ +G + G ++E+V +
Sbjct: 66 INIDGI--SNKNAKSKGVISYIPEYAVFPKHLNTHEYLYTLGKLSGCSLQTIKEKVDYWL 123
Query: 118 EAFEIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYE 177
F+I+ + S G K+K+ LI +L +DPK+LI+DE LDPK+ F ++ YE
Sbjct: 124 ARFQIEHLRFKKPNDFSSGQKKKVLLIQALFNDPKLLIMDEPTANLDPKTRNEFMDVCYE 183
Query: 178 FKEEGKSIVF-STHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKE 225
K VF S+H+LA E CD + +I++G I+ G + K I+K+
Sbjct: 184 LNVRNKMAVFVSSHILAELENYCDSLTVIHEGEILFNG---KTKNIAKD 229
>pir||JC5348 cdd4 protein - Clostridium difficile >gi|1770140|emb|CAA63569.1|
(X92982) cdd4 [Clostridium difficile]
Length = 301
Score = 122 bits (303), Expect = 4e-27
Identities = 67/221 (30%), Positives = 124/221 (55%), Gaps = 6/221 (2%)
Query: 1 MIIVENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIV 60
+I + L K + +K I V G +YG LGPNG+GKSTT+++L G+ +G + +
Sbjct: 4 IIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINI 63
Query: 61 GGVEV-AKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEA 119
G E+ K+ + + + +G + E+P+ Y LT E + + + +PK + V + ++
Sbjct: 64 LGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPK----KNVNEALKI 119
Query: 120 FEIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFK 179
++ N+ + S G KQ++ + +++ PK+LILDE NGLDP REL+
Sbjct: 120 VRLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLP 179
Query: 180 EE-GKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEEL 219
E+ G +++ S+H+L+ + I +GII G ++ + +++EL
Sbjct: 180 EKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKEL 220
>pir||G75548 ABC transporter, ATP-binding protein - Deinococcus radiodurans
(strain R1) >gi|6457873|gb|AAF09790.1|AE001882_8
(AE001882) ABC transporter, ATP-binding protein
[Deinococcus radiodurans]
Length = 354
Score = 122 bits (302), Expect = 5e-27
Identities = 76/222 (34%), Positives = 118/222 (52%), Gaps = 2/222 (0%)
Query: 1 MIIVENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIV 60
MI V +L K F K ++ ISF++ GEI G LGPNG+GKSTT+++L+G++ G+V V
Sbjct: 46 MIEVRHLCKSFARKPAVQDISFSIPAGEIVGYLGPNGAGKSTTIKVLTGLLVPDSGEVRV 105
Query: 61 GGVEVAKDPLQ-VKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEA 119
GG+ K Q V R+ + L+ L E + V +P E + E
Sbjct: 106 GGLVPWKQRRQHVARLGAVFGQRTTLWWDLPVRESLELLRHVYRVPAARFAENLAGFTEL 165
Query: 120 FEIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFK 179
E+ ++N LS G + + L ++LLHDP++L LDE GLD + RE +
Sbjct: 166 LELGPFLNTPARALSLGQRMRADLAAALLHDPELLFLDEPTVGLDVVAKERIREFVKAVN 225
Query: 180 -EEGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELK 220
E G +++ +TH L E + RV +I GR++ +G + EL+
Sbjct: 226 AERGVTVLLTTHDLGDVERLARRVMMIDTGRLLFDGPLAELQ 267
>pir||S60124 transport protein homolog C48B4.4 - Caenorhabditis elegans
Length = 1767
Score = 121 bits (300), Expect = 9e-27
Identities = 77/248 (31%), Positives = 137/248 (55%), Gaps = 3/248 (1%)
Query: 2 IIVENLRKRFG--GKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVI 59
IIV NL K + G+ + G+S G+ LLG NG+GKSTT ++GII G++
Sbjct: 611 IIVRNLVKIWSTTGERAVDGLSLRAVRGQCSILLGHNGAGKSTTFSSIAGIIRPTNGRIT 670
Query: 60 VGGVEVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEA 119
+ G +V +P + +R +G P+ LY+ LT +E V G++G + ++ +++L+
Sbjct: 671 ICGYDVGNEPGETRRHIGMCPQYNPLYDQLTVSEHLKLVYGLKGAREKDFKQDMKRLLSD 730
Query: 120 FEIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFK 179
++ N+ LS G K+K+ + +L+ D +V++LDE G+DP AR + L E +
Sbjct: 731 VKLDFKENEKAVNLSGGMKRKLCVCMALIGDSEVVLLDEPTAGMDP-GARQDVQKLVERE 789
Query: 180 EEGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKEERLEDVFLKLTQAK 239
+ ++I+ +TH + AE + D V I+ G+++A GT + LK+ L V L K
Sbjct: 790 KANRTILLTTHYMDEAERLGDWVFIMSHGKLVASGTNQYLKQKFGTGYLLTVVLDHNGDK 849
Query: 240 EEIAQVVS 247
++A +++
Sbjct: 850 RKMAVILT 857
Score = 109 bits (269), Expect = 4e-23
Identities = 70/246 (28%), Positives = 128/246 (51%), Gaps = 8/246 (3%)
Query: 2 IIVENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIVG 61
+++++L K FG + + V E +GLLG NG+GK+TT IL+G G+ ++G
Sbjct: 1442 LVIKDLTKTFGRFTAVNELCLAVDQKECFGLLGVNGAGKTTTFNILTGQSFASSGEAMIG 1501
Query: 62 GVEVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAFE 121
G +V + +GY P+ AL LT E + + G + + + ++E
Sbjct: 1502 GRDVTE-----LISIGYCPQFDALMLDLTGRESLEILAQMHGF--ENYKAKAELILECVG 1554
Query: 122 IKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKEE 181
+ + ++L+ S G K+KIS+ +LL +++ILDE G+DPK+ R ELL +E
Sbjct: 1555 MIAHADKLVRFYSGGQKRKISVGVALLAPTQMIILDEPTAGIDPKARREVWELLLWCREH 1614
Query: 182 GKS-IVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKEERLEDVFLKLTQAKE 240
S ++ ++H + E +C R+ ++ +G +IA G+ +ELK + + L ++
Sbjct: 1615 SNSALMLTSHSMDECEALCSRIAVLNRGSLIAIGSSQELKSLYGNNYTMTLSLYEPNQRD 1674
Query: 241 EIAQVV 246
+ Q+V
Sbjct: 1675 MVVQLV 1680
>pir||T42749 ATP-binding cassette transport protein homolog - Caenorhabditis
elegans >gi|3172341|gb|AAC24116.1| (AF049142)
ATP-binding cassette transporter [Caenorhabditis
elegans]
Length = 1704
Score = 121 bits (300), Expect = 9e-27
Identities = 77/248 (31%), Positives = 137/248 (55%), Gaps = 3/248 (1%)
Query: 2 IIVENLRKRFG--GKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVI 59
IIV NL K + G+ + G+S G+ LLG NG+GKSTT ++GII G++
Sbjct: 546 IIVRNLVKIWSTTGERAVDGLSLRAVRGQCSILLGHNGAGKSTTFSSIAGIIRPTNGRIT 605
Query: 60 VGGVEVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEA 119
+ G +V +P + +R +G P+ LY+ LT +E V G++G + ++ +++L+
Sbjct: 606 ICGYDVGNEPGETRRHIGMCPQYNPLYDQLTVSEHLKLVYGLKGAREKDFKQDMKRLLSD 665
Query: 120 FEIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFK 179
++ N+ LS G K+K+ + +L+ D +V++LDE G+DP AR + L E +
Sbjct: 666 VKLDFKENEKAVNLSGGMKRKLCVCMALIGDSEVVLLDEPTAGMDP-GARQDVQKLVERE 724
Query: 180 EEGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKEERLEDVFLKLTQAK 239
+ ++I+ +TH + AE + D V I+ G+++A GT + LK+ L V L K
Sbjct: 725 KANRTILLTTHYMDEAERLGDWVFIMSHGKLVASGTNQYLKQKFGTGYLLTVVLDHNGDK 784
Query: 240 EEIAQVVS 247
++A +++
Sbjct: 785 RKMAVILT 792
Score = 109 bits (269), Expect = 4e-23
Identities = 70/246 (28%), Positives = 128/246 (51%), Gaps = 8/246 (3%)
Query: 2 IIVENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIVG 61
+++++L K FG + + V E +GLLG NG+GK+TT IL+G G+ ++G
Sbjct: 1379 LVIKDLTKTFGRFTAVNELCLAVDQKECFGLLGVNGAGKTTTFNILTGQSFASSGEAMIG 1438
Query: 62 GVEVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAFE 121
G +V + +GY P+ AL LT E + + G + + + ++E
Sbjct: 1439 GRDVTE-----LISIGYCPQFDALMLDLTGRESLEILAQMHGF--ENYKAKAELILECVG 1491
Query: 122 IKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKEE 181
+ + ++L+ S G K+KIS+ +LL +++ILDE G+DPK+ R ELL +E
Sbjct: 1492 MIAHADKLVRFYSGGQKRKISVGVALLAPTQMIILDEPTAGIDPKARREVWELLLWCREH 1551
Query: 182 GKS-IVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKEERLEDVFLKLTQAKE 240
S ++ ++H + E +C R+ ++ +G +IA G+ +ELK + + L ++
Sbjct: 1552 SNSALMLTSHSMDECEALCSRIAVLNRGSLIAIGSSQELKSLYGNNYTMTLSLYEPNQRD 1611
Query: 241 EIAQVV 246
+ Q+V
Sbjct: 1612 MVVQLV 1617
>sp|P34358|YLH4_CAEEL PUTATIVE ABC TRANSPORTER C48B4.4 IN CHROMOSOME III
Length = 1758
Score = 121 bits (300), Expect = 9e-27
Identities = 77/248 (31%), Positives = 137/248 (55%), Gaps = 3/248 (1%)
Query: 2 IIVENLRKRFG--GKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVI 59
IIV NL K + G+ + G+S G+ LLG NG+GKSTT ++GII G++
Sbjct: 600 IIVRNLVKIWSTTGERAVDGLSLRAVRGQCSILLGHNGAGKSTTFSSIAGIIRPTNGRIT 659
Query: 60 VGGVEVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEA 119
+ G +V +P + +R +G P+ LY+ LT +E V G++G + ++ +++L+
Sbjct: 660 ICGYDVGNEPGETRRHIGMCPQYNPLYDQLTVSEHLKLVYGLKGAREKDFKQDMKRLLSD 719
Query: 120 FEIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFK 179
++ N+ LS G K+K+ + +L+ D +V++LDE G+DP AR + L E +
Sbjct: 720 VKLDFKENEKAVNLSGGMKRKLCVCMALIGDSEVVLLDEPTAGMDP-GARQDVQKLVERE 778
Query: 180 EEGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKEERLEDVFLKLTQAK 239
+ ++I+ +TH + AE + D V I+ G+++A GT + LK+ L V L K
Sbjct: 779 KANRTILLTTHYMDEAERLGDWVFIMSHGKLVASGTNQYLKQKFGTGYLLTVVLDHNGDK 838
Query: 240 EEIAQVVS 247
++A +++
Sbjct: 839 RKMAVILT 846
Score = 109 bits (269), Expect = 4e-23
Identities = 70/246 (28%), Positives = 128/246 (51%), Gaps = 8/246 (3%)
Query: 2 IIVENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIVG 61
+++++L K FG + + V E +GLLG NG+GK+TT IL+G G+ ++G
Sbjct: 1433 LVIKDLTKTFGRFTAVNELCLAVDQKECFGLLGVNGAGKTTTFNILTGQSFASSGEAMIG 1492
Query: 62 GVEVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAFE 121
G +V + +GY P+ AL LT E + + G + + + ++E
Sbjct: 1493 GRDVTE-----LISIGYCPQFDALMLDLTGRESLEILAQMHGF--ENYKAKAELILECVG 1545
Query: 122 IKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKEE 181
+ + ++L+ S G K+KIS+ +LL +++ILDE G+DPK+ R ELL +E
Sbjct: 1546 MIAHADKLVRFYSGGQKRKISVGVALLAPTQMIILDEPTAGIDPKARREVWELLLWCREH 1605
Query: 182 GKS-IVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKEERLEDVFLKLTQAKE 240
S ++ ++H + E +C R+ ++ +G +IA G+ +ELK + + L ++
Sbjct: 1606 SNSALMLTSHSMDECEALCSRIAVLNRGSLIAIGSSQELKSLYGNNYTMTLSLYEPNQRD 1665
Query: 241 EIAQVV 246
+ Q+V
Sbjct: 1666 MVVQLV 1671
>emb|CAA82383.2| (Z29117) contains similarity to Pfam domain: PF00005 (ABC
transporter), Score=319.9, E-value=9.7e-93, N=2~cDNA EST
yk8d5.5 comes from this gene; cDNA EST yk10f12.3 comes
from this gene~cDNA EST yk5b3.3 comes from this gene;
cDNA EST yk5b3.5 comes from >
Length = 1689
Score = 121 bits (300), Expect = 9e-27
Identities = 77/248 (31%), Positives = 137/248 (55%), Gaps = 3/248 (1%)
Query: 2 IIVENLRKRFG--GKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVI 59
IIV NL K + G+ + G+S G+ LLG NG+GKSTT ++GII G++
Sbjct: 533 IIVRNLVKIWSTTGERAVDGLSLRAVRGQCSILLGHNGAGKSTTFSSIAGIIRPTNGRIT 592
Query: 60 VGGVEVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEA 119
+ G +V +P + +R +G P+ LY+ LT +E V G++G + ++ +++L+
Sbjct: 593 ICGYDVGNEPGETRRHIGMCPQYNPLYDQLTVSEHLKLVYGLKGAREKDFKQDMKRLLSD 652
Query: 120 FEIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFK 179
++ N+ LS G K+K+ + +L+ D +V++LDE G+DP AR + L E +
Sbjct: 653 VKLDFKENEKAVNLSGGMKRKLCVCMALIGDSEVVLLDEPTAGMDP-GARQDVQKLVERE 711
Query: 180 EEGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKEERLEDVFLKLTQAK 239
+ ++I+ +TH + AE + D V I+ G+++A GT + LK+ L V L K
Sbjct: 712 KANRTILLTTHYMDEAERLGDWVFIMSHGKLVASGTNQYLKQKFGTGYLLTVVLDHNGDK 771
Query: 240 EEIAQVVS 247
++A +++
Sbjct: 772 RKMAVILT 779
Score = 109 bits (269), Expect = 4e-23
Identities = 70/246 (28%), Positives = 128/246 (51%), Gaps = 8/246 (3%)
Query: 2 IIVENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIVG 61
+++++L K FG + + V E +GLLG NG+GK+TT IL+G G+ ++G
Sbjct: 1364 LVIKDLTKTFGRFTAVNELCLAVDQKECFGLLGVNGAGKTTTFNILTGQSFASSGEAMIG 1423
Query: 62 GVEVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAFE 121
G +V + +GY P+ AL LT E + + G + + + ++E
Sbjct: 1424 GRDVTE-----LISIGYCPQFDALMLDLTGRESLEILAQMHGF--ENYKAKAELILECVG 1476
Query: 122 IKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKEE 181
+ + ++L+ S G K+KIS+ +LL +++ILDE G+DPK+ R ELL +E
Sbjct: 1477 MIAHADKLVRFYSGGQKRKISVGVALLAPTQMIILDEPTAGIDPKARREVWELLLWCREH 1536
Query: 182 GKS-IVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKEERLEDVFLKLTQAKE 240
S ++ ++H + E +C R+ ++ +G +IA G+ +ELK + + L ++
Sbjct: 1537 SNSALMLTSHSMDECEALCSRIAVLNRGSLIAIGSSQELKSLYGNNYTMTLSLYEPNQRD 1596
Query: 241 EIAQVV 246
+ Q+V
Sbjct: 1597 MVVQLV 1602
>emb|CAA82384.2| (Z29117) contains similarity to Pfam domain: PF00005 (ABC
transporter), Score=319.9, E-value=9.7e-93, N=2~cDNA EST
yk251b11.3 comes from this gene~cDNA EST yk251b11.5
comes from this gene~cDNA EST yk576e5.5 comes from this
gene~cDNA EST yk595f5.5 comes>
Length = 1691
Score = 121 bits (300), Expect = 9e-27
Identities = 77/248 (31%), Positives = 137/248 (55%), Gaps = 3/248 (1%)
Query: 2 IIVENLRKRFG--GKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVI 59
IIV NL K + G+ + G+S G+ LLG NG+GKSTT ++GII G++
Sbjct: 533 IIVRNLVKIWSTTGERAVDGLSLRAVRGQCSILLGHNGAGKSTTFSSIAGIIRPTNGRIT 592
Query: 60 VGGVEVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEA 119
+ G +V +P + +R +G P+ LY+ LT +E V G++G + ++ +++L+
Sbjct: 593 ICGYDVGNEPGETRRHIGMCPQYNPLYDQLTVSEHLKLVYGLKGAREKDFKQDMKRLLSD 652
Query: 120 FEIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFK 179
++ N+ LS G K+K+ + +L+ D +V++LDE G+DP AR + L E +
Sbjct: 653 VKLDFKENEKAVNLSGGMKRKLCVCMALIGDSEVVLLDEPTAGMDP-GARQDVQKLVERE 711
Query: 180 EEGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKEERLEDVFLKLTQAK 239
+ ++I+ +TH + AE + D V I+ G+++A GT + LK+ L V L K
Sbjct: 712 KANRTILLTTHYMDEAERLGDWVFIMSHGKLVASGTNQYLKQKFGTGYLLTVVLDHNGDK 771
Query: 240 EEIAQVVS 247
++A +++
Sbjct: 772 RKMAVILT 779
Score = 109 bits (269), Expect = 4e-23
Identities = 70/246 (28%), Positives = 128/246 (51%), Gaps = 8/246 (3%)
Query: 2 IIVENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIVG 61
+++++L K FG + + V E +GLLG NG+GK+TT IL+G G+ ++G
Sbjct: 1366 LVIKDLTKTFGRFTAVNELCLAVDQKECFGLLGVNGAGKTTTFNILTGQSFASSGEAMIG 1425
Query: 62 GVEVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAFE 121
G +V + +GY P+ AL LT E + + G + + + ++E
Sbjct: 1426 GRDVTE-----LISIGYCPQFDALMLDLTGRESLEILAQMHGF--ENYKAKAELILECVG 1478
Query: 122 IKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKEE 181
+ + ++L+ S G K+KIS+ +LL +++ILDE G+DPK+ R ELL +E
Sbjct: 1479 MIAHADKLVRFYSGGQKRKISVGVALLAPTQMIILDEPTAGIDPKARREVWELLLWCREH 1538
Query: 182 GKS-IVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKEERLEDVFLKLTQAKE 240
S ++ ++H + E +C R+ ++ +G +IA G+ +ELK + + L ++
Sbjct: 1539 SNSALMLTSHSMDECEALCSRIAVLNRGSLIAIGSSQELKSLYGNNYTMTLSLYEPNQRD 1598
Query: 241 EIAQVV 246
+ Q+V
Sbjct: 1599 MVVQLV 1604
>emb|CAC08286.1| (AL392148) putative ABC transporter ATP-binding protein
[Streptomyces coelicolor]
Length = 327
Score = 120 bits (298), Expect = 2e-26
Identities = 73/221 (33%), Positives = 114/221 (51%), Gaps = 2/221 (0%)
Query: 1 MIIVENLRKRF-GGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVI 59
+I L KR+ GG+ + G+ TV G ++G LGPNGSGK+TT+R+L G+I G
Sbjct: 21 VIATRALTKRYRGGQLAVDGLDLTVPAGSVFGFLGPNGSGKTTTIRMLMGLIEPTSGSAR 80
Query: 60 VGGVEVAKDPLQVKRIVGYVPETPALYESLTPAE-FFSFVGGVRGIPKDILEERVRKLVE 118
V G + + V VG + E PALY L+ + + ERV ++
Sbjct: 81 VLGRPMPRAARAVLPRVGALIEGPALYGFLSGRDNLLRYDAADPTADPRTRRERVAAALD 140
Query: 119 AFEIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEF 178
+ + S G KQ++ L ++LL ++L+LDE NGLDP+ R R L+ E
Sbjct: 141 RVGLAAAGGKKAKAYSLGMKQRLGLAAALLQPRRLLVLDEPTNGLDPQGMREIRSLVREL 200
Query: 179 KEEGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEEL 219
+G ++ S+H+L E +C ++ QGR+I +G V +L
Sbjct: 201 ASDGTTVFLSSHLLDEIEQVCTHAAVMAQGRLITQGAVADL 241
>pir||E70337 ABC transporter - Aquifex aeolicus >gi|2983089|gb|AAC06695.1|
(AE000689) ABC transporter [Aquifex aeolicus]
Length = 238
Score = 119 bits (296), Expect = 3e-26
Identities = 78/228 (34%), Positives = 122/228 (53%), Gaps = 16/228 (7%)
Query: 1 MIIVENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIV 60
M+ V + K F K+VLKG S +V GEI GLLGPNG+GK+T + G I+ +GKV++
Sbjct: 1 MLEVREVEKSFKKKKVLKGGSLSVNKGEIVGLLGPNGAGKTTLFNSIIGFISVDKGKVLL 60
Query: 61 GGVEVAKDP--LQVKRIVGYVPETPALYESLTPAE----FFSFVGGVRGIPKDILEERVR 114
G +V P + ++ + ++P+ L+E LT E F F D EE +
Sbjct: 61 DGEDVTHLPPFKRAQKGLAFLPQEHTLFEDLTVLENLLIFLEFF-------TDSKEEAIT 113
Query: 115 K---LVEAFEIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIF 171
K L+E F + + +Q LS G K+++ + SL+ PK ++LDE GLDP
Sbjct: 114 KAEALLEDFGLLELKDQKAYALSGGQKRRLEIARSLITTPKYVLLDEPFAGLDPIIVSEI 173
Query: 172 RELLYEFKEEGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEEL 219
RE++ K G ++ + H + + DRV II +G+++A G EE+
Sbjct: 174 REIVKNLKNNGIGVLITDHNVRETIKMVDRVYIISEGKVLAHGKPEEV 221
>pir||E83222 NosF protein PA3394 [imported] - Pseudomonas aeruginosa (strain
PAO1) >gi|9949530|gb|AAG06782.1|AE004760_10 (AE004760)
NosF protein [Pseudomonas aeruginosa]
Length = 304
Score = 119 bits (296), Expect = 3e-26
Identities = 68/220 (30%), Positives = 118/220 (52%), Gaps = 6/220 (2%)
Query: 1 MIIVENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIV 60
++ ++ R+G L G+ ++ GE+ GLLG NG+GK+TT++++ G++ EG+V V
Sbjct: 3 LVEIDGATLRYGALTALSGLDLRLEPGEVLGLLGHNGAGKTTTIKLVLGLLAPSEGRVRV 62
Query: 61 GGVEVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAF 120
G + L+ +R +GY+PE Y L+ AE ++G+ +L+E
Sbjct: 63 LGHDARS--LEARRQLGYLPENVTFYPQLSGAETLRHFARLKGVAP----AEAARLLEQV 116
Query: 121 EIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKE 180
+ + + T S G +Q++ L +LL +P++L+LDE GLDP + +LL +
Sbjct: 117 GLGHAARRRLKTYSKGMRQRLGLAQALLGEPRLLLLDEPTVGLDPLATVELYQLLDRLRG 176
Query: 181 EGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELK 220
+G IV +HVL E DR I+ GR+ G++ EL+
Sbjct: 177 QGTGIVLCSHVLPGVETHIDRAAILAGGRLQVAGSLAELR 216
>gi|11498338 cobalt transport ATP-binding protein (cbiO-1) [Archaeoglobus
fulgidus] >gi|7445658|pir||C69341 cobalt transport
ATP-binding protein (cbiO-1) homolog - Archaeoglobus
fulgidus >gi|2649880|gb|AAB90507.1| (AE001054) cobalt
transport ATP-binding protein (cbiO-1) [Archaeoglobus
fulgidus]
Length = 326
Score = 119 bits (295), Expect = 4e-26
Identities = 75/219 (34%), Positives = 125/219 (56%), Gaps = 6/219 (2%)
Query: 1 MIIVENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIV 60
MI +L +G EVLKG++F + G++ L+G NG+GK+T ++ L+G++ GKVI+
Sbjct: 34 MIEAVDLHFCYGDAEVLKGVNFKAERGKVTVLMGRNGAGKTTLLKHLNGLLRPKSGKVII 93
Query: 61 GGVEVAKDP---LQVKRIVGYVPETPALYESLTPAEFFSFVGGVR--GIPKDILEERVRK 115
G E+ D L+V++ V YV + P + L+P + G R G+ + LE VR
Sbjct: 94 DGRELKYDRKSLLEVRKRVFYVFQNPD-DQILSPTVWQDVAFGPRNLGLKGERLERVVRN 152
Query: 116 LVEAFEIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELL 175
+EA + Y +L TLS G K+++++ S+L +P I+DE +D + R+ E++
Sbjct: 153 ALEAVGLSGYEKRLCSTLSGGEKRRLAIASALAMNPDYCIMDEPSANVDGEGLRMIAEII 212
Query: 176 YEFKEEGKSIVFSTHVLALAELICDRVGIIYQGRIIAEG 214
+ +EEGK +V STH LA+ + D + G+I+ EG
Sbjct: 213 RKLREEGKGVVVSTHDADLAKEVGDYFYFMDDGKIVWEG 251
>pir||C72336 ABC transporter, ATP-binding protein - Thermotoga maritima (strain
MSB8) >gi|4981293|gb|AAD35847.1|AE001746_8 (AE001746)
ABC transporter, ATP-binding protein [Thermotoga
maritima]
Length = 265
Score = 119 bits (295), Expect = 4e-26
Identities = 77/243 (31%), Positives = 127/243 (51%), Gaps = 21/243 (8%)
Query: 4 VENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIVGGV 63
V++L+K +G K + GISF V+ GEI+ +LGPNG+GK+TT++ ++G+ G++ + G
Sbjct: 6 VKDLKKFYGEKAAVDGISFEVEKGEIFAILGPNGAGKTTTLKCITGLRKKDSGEIELNGT 65
Query: 64 EVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAFEIK 123
Y+PE LY L E + I K+ E+ +L+E F I
Sbjct: 66 FT------------YLPEEKKLYPYLRVKEIIDLF---KKIGKNFNEKNCLELLERFRID 110
Query: 124 KYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKEEGK 183
+N+ + LS G + + L L + + ILDE GLDP + + EGK
Sbjct: 111 --LNEKVTNLSHGMRTILYLSLVLSENVDLYILDEPTWGLDPIVRNEILDRIRSLTFEGK 168
Query: 184 SIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKE----ISKEERLEDVFLKLTQAK 239
S+++++HVLA E I DRV I+ +G+II G ++++K + E L LK ++
Sbjct: 169 SVLYTSHVLAEVEKIADRVAIMKEGKIILTGNLDDIKSSYGLVVSRENLNGYLLKTLKSG 228
Query: 240 EEI 242
E++
Sbjct: 229 EKV 231
>sp|P54537|YQIZ_BACSU PROBABLE AMINO-ACID ABC TRANSPORTER ATP-BINDING PROTEIN IN
BMRU-ANSR INTERGENIC REGION >gi|7442518|pir||H69962
ABC-type transport protein yqiZ - Bacillus subtilis
>gi|1303951|dbj|BAA12606.1| (D84432) YqiZ [Bacillus
subtilis] >gi|2634830|emb|CAB14327.1| (Z99116) similar
to amino acid ABC transporter (ATP-binding protein)
[Bacillus subtilis]
Length = 240
Score = 118 bits (294), Expect = 5e-26
Identities = 73/239 (30%), Positives = 125/239 (51%), Gaps = 4/239 (1%)
Query: 1 MIIVENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIV 60
MI VE L K FG EVLK IS T+ +GE+ ++GP+GSGKST +R L+ + G + +
Sbjct: 1 MIKVEKLSKSFGKHEVLKNISTTIAEGEVVAVIGPSGSGKSTFLRCLNLLEKPNGGTITI 60
Query: 61 GGVEVAK---DPLQVKRIVGYVPETPALYESLTPAEFFSFVG-GVRGIPKDILEERVRKL 116
E+ K + L+V+ +G V + L+ T E + V+ K +E+ L
Sbjct: 61 KDTEITKPKTNTLKVRENIGMVFQHFHLFPHKTVLENIMYAPVNVKKESKQAAQEKAEDL 120
Query: 117 VEAFEIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLY 176
+ + + N LS G KQ++++ +L +P +++ DE + LDP+ + +++
Sbjct: 121 LRKVGLFEKRNDYPNRLSGGQKQRVAIARALAMNPDIMLFDEPTSALDPEMVKEVLQVMK 180
Query: 177 EFKEEGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKEERLEDVFLKL 235
E E G ++V TH + A+ + DRV + QG I+ +G +E K +R +D K+
Sbjct: 181 ELVETGMTMVIVTHEMGFAKEVADRVLFMDQGMIVEDGNPKEFFMSPKSKRAQDFLEKI 239
>gb|AAC43327.1| (U17255) NisF [Lactococcus lactis] >gi|1095449|prf||2109193A nisF
gene [Lactococcus lactis]
Length = 225
Score = 118 bits (293), Expect = 6e-26
Identities = 72/232 (31%), Positives = 125/232 (53%), Gaps = 16/232 (6%)
Query: 4 VENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIVGGV 63
++NL K + K+VL+ ISF +K G + GLLG NG+GKST M+IL G+I+ GK+ G
Sbjct: 5 IQNLSKTYKEKQVLQDISFDIKSGTVCGLLGVNGAGKSTLMKILFGLISADTGKIFFDGQ 64
Query: 64 EVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAFEIK 123
E + L G + E PA+Y +L+ + + + I ++R+ + +E +
Sbjct: 65 EKTNNQL------GALIEAPAIYMNLSAFDNLK----TKALLFGISDKRIHETLEVIGLA 114
Query: 124 KYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKEEGK 183
+ + G S G KQ++ + ++L +P+ LILDE NGLDP L+ + K +G
Sbjct: 115 ETGKKRAGKFSLGMKQRLGIGMAILTEPQFLILDEPTNGLDPDGIAELLNLILKLKAKGV 174
Query: 184 SIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKEERLEDVFLKL 235
+I+ S+H L + ++ I+ +G+I + +KE+ +E +F K+
Sbjct: 175 TILISSHQLHEISKVASQIIILNKGKI------RYNRANNKEDDIEQLFFKI 220
>pir||C71237 probable transport-ATP binding protein - Pyrococcus horikoshii
>gi|3256543|dbj|BAA29226.1| (AP000001) 345aa long
hypothetical transport-ATP binding protein [Pyrococcus
horikoshii]
Length = 345
Score = 118 bits (293), Expect = 6e-26
Identities = 71/229 (31%), Positives = 137/229 (59%), Gaps = 3/229 (1%)
Query: 1 MIIVENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIV 60
M+ VE++ K + + L+ ISF V++GE + +LGP+GSGK+ + I++GII+ G++++
Sbjct: 1 MLKVESISKDYREFK-LREISFDVREGEHFIILGPSGSGKTVLLEIIAGIISPDRGRILL 59
Query: 61 GGVEVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAF 120
G ++ P + KR Y+P+ AL+ +T + +F +R IP+ + +VR++ E+
Sbjct: 60 RGEDITGLPPE-KRNFSYIPQNYALFPHMTVFDNIAFGLKLRKIPRKEVARKVREVAESL 118
Query: 121 EIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKS-ARIFRELLYEFK 179
I +++ TLS G +Q++++ +L+ P++L++DE LD ++ +++ RE+ K
Sbjct: 119 GIDHLLHRKPRTLSGGEQQRVAIARALVVKPELLLMDEPFANLDVQTKSKLIREMKRWRK 178
Query: 180 EEGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKEERL 228
E G + + TH A + DRVGI+ +GR++ G V ++ K E +
Sbjct: 179 EFGFTAIHVTHSFEEALSLGDRVGIMLRGRLVQVGDVRDVFSKPKSEEV 227
>pir||G75203 abc transporter, ATP-binding protein PAB0103 - Pyrococcus abyssi
(strain Orsay) >gi|5457587|emb|CAB49078.1| (AJ248283)
ABC transporter, ATP-binding protein [Pyrococcus abyssi]
Length = 344
Score = 118 bits (293), Expect = 6e-26
Identities = 73/221 (33%), Positives = 135/221 (61%), Gaps = 5/221 (2%)
Query: 1 MIIVENLRKRFGGKEV-LKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVI 59
M+ VE++ K + KE L+ ISF VK E + +LGP+G+GK+ + I++GII EG++I
Sbjct: 1 MLRVESVSKDY--KEFKLRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRII 58
Query: 60 VGGVEVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEA 119
+ GV+V P + KR + Y+P+ AL+ +T + +F +R I + ++ +V+++ +
Sbjct: 59 LNGVDVTSYPPE-KRNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISKV 117
Query: 120 FEIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKS-ARIFRELLYEF 178
I+ +++ TLS G KQ++++ +L+ +P++L+LDE LD ++ +R E+
Sbjct: 118 LGIEHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVWR 177
Query: 179 KEEGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEEL 219
KE G + + TH A + DRVG++ +GR++ G V+E+
Sbjct: 178 KELGFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEV 218
>pir||S49597 ATP-binding protein - Lactococcus lactis >gi|575301|emb|CAA82547.1|
(Z29363) cytoplasmic protein [Lactococcus lactis]
Length = 225
Score = 118 bits (292), Expect = 8e-26
Identities = 72/232 (31%), Positives = 125/232 (53%), Gaps = 16/232 (6%)
Query: 4 VENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIVGGV 63
++NL K + K+VL+ ISF +K G + GLLG NG+GKST M+IL G+I+ GK+ G
Sbjct: 5 IQNLSKTYKEKQVLQDISFDIKSGTVCGLLGVNGAGKSTLMKILFGLISADTGKIFFDGQ 64
Query: 64 EVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAFEIK 123
E + L G + E PA+Y +L+ + + + I ++R+ + +E +
Sbjct: 65 EKTNNQL------GALIEAPAIYMNLSAFDNLK----TKALLFGISDKRIHETLEVIGLA 114
Query: 124 KYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKEEGK 183
+ + G S G KQ++ + ++L +P+ LILDE NGLDP L+ + K +G
Sbjct: 115 ETGKKRAGKFSLGMKQRLGIGMAILTEPQFLILDEPTNGLDPDGIAELLNLILKLKAKGV 174
Query: 184 SIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKEERLEDVFLKL 235
+I+ S+H L + ++ I+ +G+I + +KE+ +E +F K+
Sbjct: 175 TILISSHQLHEISKVASQIIILNKGKIRYD------HANNKEDDIEQLFFKI 220
>pir||E82210 amino acid ABC transporter, ATP-binding protein VC1359 [imported] -
Vibrio cholerae (group O1 strain N16961)
>gi|9655852|gb|AAF94517.1| (AE004215) amino acid ABC
transporter, ATP-binding protein [Vibrio cholerae]
Length = 251
Score = 117 bits (291), Expect = 1e-25
Identities = 74/239 (30%), Positives = 130/239 (53%), Gaps = 4/239 (1%)
Query: 1 MIIVENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIV 60
MI ++++ K +G VLK I+ VK GE + GP+GSGKST +R ++ + +G++IV
Sbjct: 10 MIQIKDMNKWYGEFHVLKNINLNVKKGERIVICGPSGSGKSTMIRCINRLEEHQKGQIIV 69
Query: 61 GGVEVAKDPLQ---VKRIVGYVPETPALYESLTPAEFFSFVG-GVRGIPKDILEERVRKL 116
G E+ +D V+R VG + L+ LT E + V+ +PKD EE K
Sbjct: 70 AGNELTEDLKNIELVRREVGMCFQHFNLFPHLTVLENCTLAPIWVKKMPKDKAEEIAMKY 129
Query: 117 VEAFEIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLY 176
+ I + ++ G LS G +Q++++ SL +P++++ DE + LDP+ R +++
Sbjct: 130 LTRVRIPEQADKYPGQLSGGQQQRVAIARSLCMNPQIMLFDEPTSALDPEMVREVLDVMV 189
Query: 177 EFKEEGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKEERLEDVFLKL 235
E EEG +++ TH + A+ + DRV + G II E +E E + +R ++ ++
Sbjct: 190 ELAEEGMTMLCVTHEMGFAKEVADRVIFMDAGEIIEENNPKEFFENPQSDRTQNFLAQI 248
>sp|O34992|OPCA_BACSU GLYCINE BETAINE/CARNITINE/CHOLINE TRANSPORT ATP-BINDING PROTEIN
OPUCA >gi|7442620|pir||C69670 glycine
betaine/carnitine/choline ABC transporter (ATP-bindin)
opuCA - Bacillus subtilis >gi|2271389|gb|AAB63768.1|
(AF009352) ATPase [Bacillus subtilis]
>gi|2635896|emb|CAB15388.1| (Z99121) glycine
betaine/carnitine/choline ABC transporter (ATP-binding
protein) [Bacillus subtilis]
Length = 380
Score = 116 bits (287), Expect = 3e-25
Identities = 74/254 (29%), Positives = 143/254 (56%), Gaps = 12/254 (4%)
Query: 1 MIIVENLRKRF-GGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVI 59
M+ +E + K + GGK+ + I + GE +GP+G GK+TTM++++ +I G++
Sbjct: 1 MLKLEQVSKVYKGGKKAVNSIDLDIAKGEFICFIGPSGCGKTTTMKMINRLIEPSSGRIF 60
Query: 60 VGGVEV-AKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVE 118
+ G + +DP++++R +GYV + L+ +T + S V + P++ +ER R+L++
Sbjct: 61 IDGENIMEQDPVELRRKIGYVIQQIGLFPHMTIQQNISLVPKLLKWPEEKRKERARELLK 120
Query: 119 AFEI-KKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYE 177
++ +Y+++ LS G +Q+I ++ +L +P ++++DE LDP + +E E
Sbjct: 121 LVDMGPEYLDRYPHELSGGQQQRIGVLRALAAEPPLILMDEPFGALDPITRDSLQE---E 177
Query: 178 FKE----EGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKEERLEDVFL 233
FK+ K+IVF TH + A + DR+ I+ G I+ GT +E+ E +E+
Sbjct: 178 FKKLQRTLNKTIVFVTHDMDEAIKLADRIVILKAGEIVQVGTPDEILRNPANEFVEEFIG 237
Query: 234 K--LTQAKEEIAQV 245
K L Q++ +I +V
Sbjct: 238 KERLIQSRPDIERV 251
>emb|CAB99138.1| (AL390188) putative ABC transport system ATP-binding protein
[Streptomyces coelicolor A3(2)]
Length = 306
Score = 116 bits (287), Expect = 3e-25
Identities = 72/245 (29%), Positives = 126/245 (51%), Gaps = 9/245 (3%)
Query: 2 IIVENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIVG 61
I V +L K +G + + +SFTV+ G + G LGPNG+GKSTTMR++ G+ G VG
Sbjct: 4 IDVRDLTKDYGTRRAVDDLSFTVRPGRVTGFLGPNGAGKSTTMRLVLGLDRPTAGTATVG 63
Query: 62 G--VEVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEA 119
G +PL R+VG + + + S T + + +P RV +++E
Sbjct: 64 GRPYTALDEPL---RLVGALLDADCAHGSRTARDHLRVLAASNRLPA----RRVDEVMEQ 116
Query: 120 FEIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFK 179
I + + T S G +Q++ + ++LL DP+V++LDE NGLDP+ R LL
Sbjct: 117 TGIAAVARRRVRTYSLGMRQRLGIAAALLGDPEVVMLDEPSNGLDPEGIVWIRGLLRGLA 176
Query: 180 EEGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKEERLEDVFLKLTQAK 239
EG++++ S+H++ D + ++ +GR++A+ + + + R+ T K
Sbjct: 177 AEGRTVLVSSHLMNETASFVDHLVVLGRGRLLADTPMRNFIDARVQPRVRIRTSDATALK 236
Query: 240 EEIAQ 244
+A+
Sbjct: 237 AALAR 241
>gi|10957143 Potential ABC transporter [Lactococcus lactis]
>gi|11346268|pir||T43103 ABC transport protein -
Lactococcus lactis plasmid pMRC01
>gi|3582213|gb|AAC56009.1| (AE001272) Potential ABC
transporter [Lactococcus lactis]
Length = 298
Score = 115 bits (286), Expect = 4e-25
Identities = 67/239 (28%), Positives = 130/239 (54%), Gaps = 11/239 (4%)
Query: 4 VENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIVGGV 63
V NL + K++LK +SF +I GL+G NGSGK+T M+ + G+I F G++ + +
Sbjct: 10 VNNLSTQIRKKKILKNVSFKGNTSQIIGLVGANGSGKTTIMKSILGLIK-FSGEIEISKI 68
Query: 64 EVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAFEIK 123
+ + + VG + E P +Y LT E ++G + + ++++ ++
Sbjct: 69 NILFNNHPILSRVGSLIEEPGIYPFLTGREHLQCFSILKGKEA---QSDINEIIDQLKLT 125
Query: 124 KYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKEEGK 183
++++ + S G KQK+++ +LL+ P ++ILDE MNGLD +S R+++ K +G
Sbjct: 126 TFIDEKASSYSLGMKQKLAIAIALLNKPILVILDEPMNGLDIQSIHDLRDIIINKKNQGV 185
Query: 184 SIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKEERLEDVFLKLTQAKEEI 242
+ V S+H+L+ E + D++ II G+ I + K+ +++F +T K+++
Sbjct: 186 TFVISSHLLSELEKVADQLVIIKDGKSILNLPFKTFKK-------KEIFCLITDQKDKL 237
>pir||T27121 hypothetical protein Y53C10A.9 - Caenorhabditis elegans
>gi|3947655|emb|CAA22142.1| (AL033536) predicted using
Genefinder~contains similarity to Pfam domain: PF00005
(ABC transporter), Score=319.4, E-value=1.4e-92, N=2~cDNA
EST yk93b1.5 comes from this gene~cDNA EST yk208d6.3
comes from this gene~cDNA EST yk208d6.5 comes from this
gene
Length = 1564
Score = 115 bits (286), Expect = 4e-25
Identities = 67/248 (27%), Positives = 133/248 (53%), Gaps = 8/248 (3%)
Query: 1 MIIVENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIV 60
+++++ L K FG + +S +V E +G+LG NG+GK+TT I++G+ G +
Sbjct: 1249 VLVIDGLVKDFGKFRAVNDLSISVGHEECFGMLGANGAGKTTTFDIITGLTMPTGGSATI 1308
Query: 61 GGVEVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAF 120
G ++ + +GY P+ A+ + ++ + + ++G P ++E V +++
Sbjct: 1309 DGHDITE-----TIHIGYCPQFDAMLQQISCRQTLRIMAKLQGYPN--VKEVVELVLDCV 1361
Query: 121 EIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKE 180
+ + +L+ S G K+KIS+ +L+ +ILDE G+DP++ R ++++E +E
Sbjct: 1362 GMSDFGYKLVKNCSGGQKRKISVGIALMSRATCIILDEPTAGIDPRARREIWDIIHEMRE 1421
Query: 181 EGK-SIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKEERLEDVFLKLTQAK 239
+ K SIV ++H + E +C R+GI+ +G +IA GT + LK + + L +
Sbjct: 1422 QAKCSIVLTSHSMEECEALCTRIGILRKGEMIALGTSQSLKSQYGNTYMMTLILNSLEDL 1481
Query: 240 EEIAQVVS 247
E + +VS
Sbjct: 1482 ESVCVIVS 1489
Score = 107 bits (264), Expect = 2e-22
Identities = 61/210 (29%), Positives = 115/210 (54%), Gaps = 2/210 (0%)
Query: 13 GKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIVGGVEVAKDPLQV 72
G++ + G+S G++ LLG NG GKSTT +++G+ EGKV++GG++ + +
Sbjct: 463 GEKAVNGLSLRAIRGQVSILLGHNGCGKSTTFGMITGMHQATEGKVMIGGIDANANRAEA 522
Query: 73 KRIVGYVPETPALYESLTPAEFFSFVGGVRG-IPKDILEERVRKLVEAFEIKKYMNQLIG 131
+ ++GY P+ +Y+ LT E V ++G + L++ E+ N L
Sbjct: 523 RELIGYCPQYNPIYDELTVWEHLRLVNALKGRSGGSDFKMDAESLLKQIELTDKRNTLAK 582
Query: 132 TLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKEEGKSIVFSTHV 191
LS G K+K+ + +++ +V++LDE G+DP SARI + + + ++I+ +TH
Sbjct: 583 NLSGGMKRKLCVCMAMIGGSRVILLDEPTAGMDP-SARIDVQNMLALVKADRTILLTTHY 641
Query: 192 LALAELICDRVGIIYQGRIIAEGTVEELKE 221
+ AE + D + ++ G++ A G+ LK+
Sbjct: 642 MDEAEKLGDWIFVMSHGKMAASGSKHYLKQ 671
>pir||G72598 probable ABC transporter ATP-binding protein APE1255 - Aeropyrum
pernix (strain K1) >gi|5104931|dbj|BAA80245.1|
(AP000061) 253aa long hypothetical ABC transporter
ATP-binding protein [Aeropyrum pernix]
Length = 253
Score = 115 bits (285), Expect = 5e-25
Identities = 70/232 (30%), Positives = 120/232 (51%), Gaps = 3/232 (1%)
Query: 5 ENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIVGGVE 64
E + KR GG+ VLK +S TV G +YG++GPNG+GK+T R L G+ G+V + G
Sbjct: 16 EGVWKRLGGRWVLKDVSLTVPRGSVYGVVGPNGAGKTTLFRTLLGLYRADRGRVALLGEP 75
Query: 65 VAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAFEIKK 124
V + + R V Y+PE Y ++T EF + G+ + LE + + +
Sbjct: 76 VERAGGSLFRRVAYLPEDGEPYRNMTGHEFLRLYASIYGV--EDLEGYLEEASRLSGLGG 133
Query: 125 YMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKE-EGK 183
+ + + + S G ++++ + + L P + +LDE GLDP + R LL E+ E G
Sbjct: 134 RLGERVRSYSKGMRRRLLVAAMLALKPSLAVLDEPTAGLDPVYSVGIRRLLKEYSERHGV 193
Query: 184 SIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKEERLEDVFLKL 235
+++ S+H + E +C + +I GRI+ G+ E + LE+ ++ L
Sbjct: 194 TVLLSSHNMYEVESVCSEITMISSGRIVYSGSPGEAVRRTGASSLEEAYVAL 245
>pir||B71234 probable transport protein - Pyrococcus horikoshii
>gi|3256518|dbj|BAA29201.1| (AP000001) 260aa long
hypothetical transport protein [Pyrococcus horikoshii]
Length = 260
Score = 113 bits (281), Expect = 2e-24
Identities = 74/246 (30%), Positives = 136/246 (55%), Gaps = 13/246 (5%)
Query: 13 GKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIVGGVEVAKDPL-Q 71
GK VLK ISF+ +G + ++GPNGSGK+T +++L+G++ +G V++ G+ + + +
Sbjct: 14 GKTVLKSISFSFSEGTL-AIVGPNGSGKTTLVKMLNGLLKPKKGNVLIDGINTKEVSVAE 72
Query: 72 VKRIVGYVPETP-ALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAFEIKKYMNQLI 130
+ RIVGYV + P A++ + +F G+ ++ +++RVR +EA ++ + N+
Sbjct: 73 LSRIVGYVFQNPDAMFFEENVFKEVAFGPKNLGLNEEEVKKRVRWALEAVGLRGFENRNP 132
Query: 131 GTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKEEGKSIVFSTH 190
LS G KQ++++ L PK L+LDE GLD + + ++ + EG SI+ TH
Sbjct: 133 FELSGGEKQRLAIACILAMKPKYLVLDEPNTGLDERGLQDLINVIKNLRREGSSIILVTH 192
Query: 191 VLALAELICDRVGIIYQGRIIAEGTVEELKEIS------KEERL----EDVFLKLTQAKE 240
+ L + D+V ++ G + G+ +E E+ KE L +DV + + E
Sbjct: 193 DIELVLEVADKVLLLKDGELKFFGSTKEFFELDLEGFGLKEPELVKISKDVGINFVRNVE 252
Query: 241 EIAQVV 246
E+ +V+
Sbjct: 253 ELLKVI 258
>gb|AAF91339.1|AF249729_1 (AF249729) ATPase OpuCA [Listeria monocytogenes]
Length = 397
Score = 113 bits (281), Expect = 2e-24
Identities = 70/255 (27%), Positives = 141/255 (54%), Gaps = 6/255 (2%)
Query: 1 MIIVENLRKRF-GGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVI 59
M+ E++ K + GGK+ + ++ + GE +GP+G GK+TTM++++ +I EGK+
Sbjct: 1 MLKFEHVTKTYKGGKKAVNDLTLNIDKGEFVCFIGPSGCGKTTTMKMINRLIEPTEGKIF 60
Query: 60 VGGVEV-AKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVE 118
+ ++ A+DP++++R +GYV + L +T E V + ++ +ER ++L++
Sbjct: 61 INDKDIMAEDPVKLRRSIGYVIQQIGLMPHMTIRENIVLVPKLLKWSEEKKQERAKELIK 120
Query: 119 AFEI-KKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYE 177
++ ++++++ LS G +Q+I ++ +L + ++++DE LDP + +E
Sbjct: 121 LVDLPEEFLDRYPYELSGGQQQRIGVLRALAAEQNLILMDEPFGALDPITRDSLQEEFKN 180
Query: 178 F-KEEGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKEERLEDVFLK-- 234
KE GK+I+F TH + A + DR+ I+ G I+ T +E+ +ED K
Sbjct: 181 LQKELGKTIIFVTHDMDEAIKLADRIVIMKDGEIVQFDTPDEILRNPANSFVEDFIGKDR 240
Query: 235 LTQAKEEIAQVVSAL 249
L +AK ++ QV +
Sbjct: 241 LIEAKPDVTQVAQIM 255
>pir||T36288 probable ABC-type transport system ATP-binding chain - Streptomyces
coelicolor >gi|4803685|emb|CAB42665.1| (AL049819)
putative ABC transporter ATP-binding subunit
[Streptomyces coelicolor A3(2)]
Length = 276
Score = 113 bits (280), Expect = 2e-24
Identities = 76/244 (31%), Positives = 132/244 (53%), Gaps = 8/244 (3%)
Query: 5 ENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIVGGVE 64
E+L G + VL+ + FTV G I GLLGP+G GKST MR + G G + V G
Sbjct: 28 EDLTVVRGPRTVLRVLGFTVPRGRITGLLGPSGCGKSTLMRAIVGTQAKVTGTLDVLGRP 87
Query: 65 VAKDPLQVKRIVGYVPETPALYESLT---PAEFFSFVGGVRGIPKDILEERVRKLVEAFE 121
L+ + +GYV + P++++ LT ++F+ + D + V +++ +
Sbjct: 88 AGHPALRTR--IGYVTQAPSVFDDLTVRQNLDYFAEILDPGRAASDRRRDDVTRVIADVD 145
Query: 122 IKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEF-KE 180
+ + + L G LS G + ++SL +LL P++L+LDE GLDP R L + +
Sbjct: 146 LTAHADALAGNLSGGQRSRVSLAVALLGAPELLVLDEPTVGLDPVLRRDLWTLFHSIAAD 205
Query: 181 EGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKEERLEDVFLKLT-QAK 239
G +++ S+HV+ AE C R+ ++ +G ++A+ T + L+ + E +E+ FL L +AK
Sbjct: 206 RGATLLVSSHVMDEAER-CHRLLLMREGEVLADDTPDALRTRTGSETVEEAFLHLVDEAK 264
Query: 240 EEIA 243
++ A
Sbjct: 265 DKAA 268
>dbj|BAA15193.1| (D90793) Ribose transport ATP-binding protein RbsA. [Escherichia
coli]
Length = 327
Score = 112 bits (278), Expect = 4e-24
Identities = 76/244 (31%), Positives = 120/244 (49%), Gaps = 15/244 (6%)
Query: 1 MIIVENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKV-I 59
++ ++ K++ G VLKGI FT+ GE++ LLG NG+GKST M+I++GI G + I
Sbjct: 11 LLCARSVYKQYSGVNVLKGIDFTLHQGEVHALLGGNGAGKSTLMKIIAGITPADSGTLEI 70
Query: 60 VGGVEVAKDPLQVKRIVGY-VPETPALYESLTPAEFFSFVGGVRGIPKDILE-ERVRKLV 117
G V P+ ++ Y VP+ P L+ SL+ E F G+ K L ++++ L+
Sbjct: 71 EGNNYVRLTPVHAHQLGIYLVPQEPLLFPSLSIKENILF-----GLAKKQLSMQKMKNLL 125
Query: 118 EAFEIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYE 177
A + ++ L G+L +Q + ++ L+ D ++LILDE L P L E
Sbjct: 126 AALGCQFDLHSLAGSLDVADRQMVEILRGLMRDSRILILDEPTASLTPAETERLFSRLQE 185
Query: 178 FKEEGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKEERLEDVFLKLTQ 237
G IVF +H L I DR+ ++ G I G EL +D+ +T
Sbjct: 186 LLATGVGIVFISHKLPEIRQIADRISVMRDGTIALSGKTSELS-------TDDIIQAITP 238
Query: 238 AKEE 241
A E
Sbjct: 239 AVRE 242
>sp|P77257|EGO_ECOLI PUTATIVE ABC TRANSPORTER ATP-BINDING PROTEIN EGO (EGO10A)
>gi|7445685|pir||D64905 probable sugar transport
ATP-binding protein b1513 - Escherichia coli
>gi|1742490|dbj|BAA15200.1| (D90794) Ribose transport
ATP-binding protein RbsA. [Escherichia coli]
>gi|1787792|gb|AAC74586.1| (AE000249) putative
ATP-binding component of a transport system [Escherichia
coli K12] >gi|3661533|gb|AAC61747.1| (AF089855) aerobic
growth essential protein [Escherichia coli]
Length = 511
Score = 112 bits (278), Expect = 4e-24
Identities = 76/244 (31%), Positives = 120/244 (49%), Gaps = 15/244 (6%)
Query: 1 MIIVENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKV-I 59
++ ++ K++ G VLKGI FT+ GE++ LLG NG+GKST M+I++GI G + I
Sbjct: 11 LLCARSVYKQYSGVNVLKGIDFTLHQGEVHALLGGNGAGKSTLMKIIAGITPADSGTLEI 70
Query: 60 VGGVEVAKDPLQVKRIVGY-VPETPALYESLTPAEFFSFVGGVRGIPKDILE-ERVRKLV 117
G V P+ ++ Y VP+ P L+ SL+ E F G+ K L ++++ L+
Sbjct: 71 EGNNYVRLTPVHAHQLGIYLVPQEPLLFPSLSIKENILF-----GLAKKQLSMQKMKNLL 125
Query: 118 EAFEIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYE 177
A + ++ L G+L +Q + ++ L+ D ++LILDE L P L E
Sbjct: 126 AALGCQFDLHSLAGSLDVADRQMVEILRGLMRDSRILILDEPTASLTPAETERLFSRLQE 185
Query: 178 FKEEGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKEERLEDVFLKLTQ 237
G IVF +H L I DR+ ++ G I G EL +D+ +T
Sbjct: 186 LLATGVGIVFISHKLPEIRQIADRISVMRDGTIALSGKTSELS-------TDDIIQAITP 238
Query: 238 AKEE 241
A E
Sbjct: 239 AVRE 242
>gb|AAC17172.1| (AF065141) ABC transporter ATP-binding protein homolog
[Streptococcus mutans]
Length = 293
Score = 112 bits (278), Expect = 4e-24
Identities = 75/249 (30%), Positives = 131/249 (52%), Gaps = 17/249 (6%)
Query: 4 VENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIVGGV 63
+++L KR+G + L ++ T++ GEIYGL+G NG+GK+T +++++ +I +G V V G
Sbjct: 7 IKHLSKRYGQQLALDNVNLTIQKGEIYGLIGKNGAGKTTLIKVITKLIQPSQGSVSVFGS 66
Query: 64 EVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAFEIK 123
+ + VG V ETP LT + + R +P ++ + + + +
Sbjct: 67 STQSEWTHALKRVGSVIETPVALNHLTARQNLHYYCKARHVPN--ADKVIDESLTLVGLT 124
Query: 124 KYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKEE-G 182
+ S G KQ++ + +L+ P LILDE +NGLDP + + FR ++ + EE
Sbjct: 125 NTGKKKFRGFSLGMKQRLGIAIALIVKPDFLILDEPINGLDPVAIKEFRHMIKKLNEEHD 184
Query: 183 KSIVFSTHVLALAEL--ICDRVGIIYQGRIIAEGTVEELKEISK---EERLEDVFLKLTQ 237
+++ S+H+L+ EL + + GII GRII KEISK + + ED + T
Sbjct: 185 MTVIISSHILS-DELYQVATKFGIIENGRII--------KEISKADFDTQSEDYIVLKTS 235
Query: 238 AKEEIAQVV 246
E +Q++
Sbjct: 236 HINEASQIL 244
>dbj|BAB03891.1| (AP001507) amino acid ABC transporter (ATP-binding protein)
[Bacillus halodurans]
Length = 247
Score = 111 bits (275), Expect = 8e-24
Identities = 71/249 (28%), Positives = 134/249 (53%), Gaps = 13/249 (5%)
Query: 1 MIIVENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIV 60
MI V++L K+FG EVLKG+ TV+ G++ ++GP+GSGK+T +R L+ + T G V +
Sbjct: 1 MIAVQSLYKKFGEVEVLKGLDLTVERGKVVVVIGPSGSGKTTLLRCLNILETPTSGSVQI 60
Query: 61 -------GGVEVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDI---LE 110
G +K+ +R+ G V ++ L+ +T + + + G + K+ +E
Sbjct: 61 ENQTLDFSGKVSSKEIANFRRLTGMVFQSYNLFPHMTVLQ--NVMEGPMTVKKEAKAQVE 118
Query: 111 ERVRKLVEAFEIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARI 170
E+ ++L+ + LS G +Q++ + +L +PKV++ DE + LDP+
Sbjct: 119 EKAKQLLAKVGLADKETVYPFQLSGGQQQRVGIARALAMEPKVMLFDEPTSALDPELVGE 178
Query: 171 FRELLYEFKEEGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKEERLED 230
++ E EEG +++ TH + A+ + D V + G+I+ GT +++ + K ER +
Sbjct: 179 VLRVMKELAEEGMTMIVVTHEMRFAQEVADEVIFMDDGKIVERGTPDDIFKTPKVERTKQ 238
Query: 231 VFLKLTQAK 239
FL+L ++
Sbjct: 239 -FLRLIHSR 246
>sp|P44785|ABC_HAEIN ATP-BINDING PROTEIN ABC >gi|1073885|pir||C64082 ATP-binding protein
homolog HI0621 - Haemophilus influenzae (strain Rd
KW20) >gi|1573615|gb|AAC22280.1| (U32744) ABC
transporter, ATP-binding protein [Haemophilus influenzae
Rd]
Length = 345
Score = 110 bits (272), Expect = 2e-23
Identities = 70/225 (31%), Positives = 123/225 (54%), Gaps = 6/225 (2%)
Query: 17 LKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIVGGVEVAK----DPLQV 72
L +S ++ G+I G++G +G+GKST +R ++ + G VIV GVE+ K + +
Sbjct: 21 LDNVSLNIEKGQICGVIGASGAGKSTLIRCVNLLEKPTSGSVIVDGVELTKLSDRELVLA 80
Query: 73 KRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAFEIKKYMNQLIGT 132
+R +G + + L S T E + + K ++E++ L++ + + +
Sbjct: 81 RRQIGMIFQHFNLLSSRTVFENVALPLELESESKAKIQEKITALLDLVGLSEKRDAYPSN 140
Query: 133 LSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKEE-GKSIVFSTHV 191
LS G KQ++++ +L DPKVL+ DEA + LDP + + +LL E G +I+ TH
Sbjct: 141 LSGGQKQRVAIARALASDPKVLLCDEATSALDPATTQSILKLLKEINRTLGITILLITHE 200
Query: 192 LALAELICDRVGIIYQGRIIAEGTVEELKEISKEERLEDVFLKLT 236
+ + + ICD+V +I QGR++ +GTV E+ K E L F++ T
Sbjct: 201 MEVVKQICDQVAVIDQGRLVEQGTVGEIFANPKTE-LAQEFIRST 244
>gb|AAD32038.1|AF093787_6 (AF093787) ABC transporter homolog CylA [Streptococcus agalactiae]
Length = 309
Score = 109 bits (269), Expect = 4e-23
Identities = 75/248 (30%), Positives = 133/248 (53%), Gaps = 13/248 (5%)
Query: 2 IIVENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIVG 61
I ++N+ K++G E L+ I+ ++G+ YGLLGPNG+GK+T + + +I +F K G
Sbjct: 3 IKLKNIGKKYGSFEALRDINLIFEEGKFYGLLGPNGAGKTT---LFNPLIQNF--KQTSG 57
Query: 62 GV--EVAKDPLQVK---RIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKL 116
+ EV PL +K R +G V ++ L ++LT E G + G+ K + R++ L
Sbjct: 58 DIKWEVDGKPLSIKDFYRHIGIVFQSNRLDDNLTVEENLISRGALYGLSKSQVRNRLKDL 117
Query: 117 VEAFEIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLY 176
+I Q G+LS G K+K+ + +LL P +L+LDE GLDP+S R + +
Sbjct: 118 QTYLDITAIKKQKYGSLSGGQKRKVDIARALLPQPSLLLLDEPTTGLDPQSRRDLWDAIA 177
Query: 177 EFKEEGK-SIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKEERLEDVFLKL 235
+ ++ + ++V TH L CD + ++ +G I G ++ E L +V LK
Sbjct: 178 QLNQQSQMTVVLITHYLEEMS-ACDVLNVLIEGNIYYSGDIKSFIEQHSTTNL-NVVLKP 235
Query: 236 TQAKEEIA 243
++ ++++
Sbjct: 236 EKSLDQLS 243
>gb|AAF56807.1| (AE003766) CG9990 gene product [Drosophila melanogaster]
Length = 808
Score = 109 bits (269), Expect = 4e-23
Identities = 73/239 (30%), Positives = 128/239 (53%), Gaps = 4/239 (1%)
Query: 9 KRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIV-GGVEVAK 67
K+ +VL ++ TV G IYGLLG +G GK+T + + G G++ V GG +
Sbjct: 85 KKKNANQVLNNLNMTVPKGTIYGLLGASGCGKTTLLSCIVGRRYMDAGEIFVLGGKPGTR 144
Query: 68 DPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAFEIKKYMN 127
+ VGY+P+ ALY + E + G + G+ + ER++ L+ ++
Sbjct: 145 GSGVPGKRVGYMPQEIALYGEFSIQETMMYFGWIFGMDTKEILERLQFLLNFLDLPSE-K 203
Query: 128 QLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSAR-IFRELLYEFKEEGKSIV 186
+L+ LS G ++++S +L+HDP++LILDE G+DP + I+ L++ K K+++
Sbjct: 204 RLVKNLSGGQQRRVSFAVALMHDPELLILDEPTVGVDPLLRQSIWNHLVHITKAGQKTVI 263
Query: 187 FSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKEERLEDVFLKLTQAKEEIAQV 245
+TH + A +G++ G ++AE + L I K LE+VFLKL++ + + V
Sbjct: 264 ITTHYIEEARQ-AHTIGLMRSGHLLAEESPSVLLSIYKCISLEEVFLKLSRIQSQKGDV 321
>pir||D70020 ABC transporter (ATP-binding protein) homolog yusC - Bacillus
subtilis >gi|2635771|emb|CAB15264.1| (Z99120) similar to
ABC transporter (ATP-binding protein) [Bacillus
subtilis]
Length = 341
Score = 107 bits (265), Expect = 1e-22
Identities = 63/238 (26%), Positives = 127/238 (52%), Gaps = 5/238 (2%)
Query: 8 RKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIVGGVEV-- 65
+ + G ++ +S ++K GEI+G++G +G+GKS+ +R+L+G+ G V V G ++
Sbjct: 12 KSKHGDVNAVQNVSLSIKKGEIFGIIGYSGAGKSSLIRLLNGLEKPTSGTVEVAGTKINE 71
Query: 66 --AKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAFEIK 123
+ + + + + + L S T + F + G+ K +R +L++ ++
Sbjct: 72 VNGRGLRKARHEISMIFQHFNLLWSRTVRDNIMFPLEIAGVKKSERIKRANELIKLVGLE 131
Query: 124 KYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKEE-G 182
LS G KQ++ + +L ++PKVL+ DEA + LDP++ +LL + E G
Sbjct: 132 GKEKSYPSQLSGGQKQRVGIARALANNPKVLLCDEATSALDPQTTDSILDLLSDINERLG 191
Query: 183 KSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKEERLEDVFLKLTQAKE 240
+IV TH + + IC+RV ++ G+++ EG V ++ + KE+ + ++T+ +E
Sbjct: 192 LTIVLITHEMHVIRKICNRVAVMENGKVVEEGEVLDVFKNPKEQMTKRFVQQVTEPEE 249
>gi|11498492 ribose ABC transporter, ATP-binding protein (rbsA-1) [Archaeoglobus
fulgidus] >gi|7430344|pir||G69360 probable ribose ABC
transporter rbsA-1 - Archaeoglobus fulgidus
>gi|2649712|gb|AAB90351.1| (AE001042) ribose ABC
transporter, ATP-binding protein (rbsA-1) [Archaeoglobus
fulgidus]
Length = 495
Score = 107 bits (264), Expect = 2e-22
Identities = 80/244 (32%), Positives = 125/244 (50%), Gaps = 13/244 (5%)
Query: 4 VENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIVGGV 63
+ N+ KRFG I+F VK GEI+GLLG NG+GK+T M IL GI EG++I G
Sbjct: 1 MRNIVKRFGSLVANDHINFEVKRGEIHGLLGENGAGKTTLMNILYGIYQPDEGEIIFEGK 60
Query: 64 EVA-KDPLQ-VKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDIL------EERVRK 115
+V K P + +G V + L + + + V G R P D L EER+ +
Sbjct: 61 KVRFKSPKDAISAGIGMVHQHFMLVPRMNVLQ--NIVLGYR-TPSDPLINHRWVEERIER 117
Query: 116 LVEAFEIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELL 175
L E + I + ++I LS G +Q++ ++ +L D K+LILDE L P+ L
Sbjct: 118 LSEKYGIDVALYEVIMNLSVGEEQRVEILKALFRDVKLLILDEPTAVLTPQEVDSLFYAL 177
Query: 176 YEFKEEGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEEL--KEISKEERLEDVFL 233
+ G +I+F TH L A + DR+ ++ +GR + E +E+++ D+ L
Sbjct: 178 KSMTKSGLTIIFITHKLKEALKVTDRITVLRRGRKVGTVITSETNERELTRMMVGRDIVL 237
Query: 234 KLTQ 237
+T+
Sbjct: 238 DITK 241
Score = 88.2 bits (215), Expect = 9e-17
Identities = 55/208 (26%), Positives = 105/208 (50%), Gaps = 11/208 (5%)
Query: 13 GKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIVGGVEVAKDPLQV 72
G +KG+SF++++GEI+G+ G +G+G+ ++G+ G++I+ G ++ +
Sbjct: 263 GNYAVKGVSFSIREGEIFGIAGVSGNGQKELEEAIAGLRKVERGRIILDGKDITAKGVAE 322
Query: 73 KRIVGYVPE-------TPAL--YESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAFEIK 123
+ + Y+PE P+L E+L +F + + + +E+R LVE F +K
Sbjct: 323 REDIAYIPEDRIGVGLAPSLSVLENLMLKDFKKYKKRF-SLNFEEMEKRAMSLVEEFSVK 381
Query: 124 -KYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKEEG 182
++ GTLS G Q++ L L +P+++I + GLD R L E G
Sbjct: 382 TPSLHSPAGTLSGGNIQRLILARELSRNPRLIIASQPTRGLDVAGIDYVRRRLIEAAMRG 441
Query: 183 KSIVFSTHVLALAELICDRVGIIYQGRI 210
+++ + L + DR+G++Y+G I
Sbjct: 442 SAVLLISEDLDEIFQLSDRIGVMYEGEI 469
>pir||H75161 ribose abc transporter, ATP-binding protein (rbsa) PAB0303 -
Pyrococcus abyssi (strain Orsay)
>gi|5457885|emb|CAB49375.1| (AJ248284) ribose ABC
transporter, ATP-binding protein (rbsA) [Pyrococcus
abyssi]
Length = 498
Score = 104 bits (258), Expect = 8e-22
Identities = 68/233 (29%), Positives = 127/233 (54%), Gaps = 6/233 (2%)
Query: 13 GKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIVGGVEVA-KDPLQ 71
G L+G++ V++GEI+GLLG NG+GKST MRIL G I +G++ V G EV+ P
Sbjct: 16 GVVALRGVNLKVEEGEIHGLLGENGAGKSTLMRILYGEIKPTKGEIKVFGKEVSFNGPWD 75
Query: 72 -VKRIVGYVPETPALYESLTPAE--FFSFVGGVRGIPKDILEERVRKLVEAFEIKKYMNQ 128
++ + V + L + T E + + + GI +E+ ++ + + +N+
Sbjct: 76 AIREGIAMVYQHFTLVPTFTVLENLYLAMLSINPGIKISDVEKLAKEKMREVGFEVPLNE 135
Query: 129 LIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKEEGKSIVFS 188
++ L G +Q++ +I +L+ + K+LILDE + L P + + L KE G +++F
Sbjct: 136 IVEDLPVGIQQRVEIIKALMLNAKILILDEPTSVLTPIEVKELFKTLRNLKERGITVIFI 195
Query: 189 THVLALAELICDRVGIIYQGRIIAEGTVEEL--KEISKEERLEDVFLKLTQAK 239
TH L + I DRV ++ +G ++ E+ +E+++ DV +++++ K
Sbjct: 196 THKLKEVKEITDRVTVLRRGEVVGTVKTSEVSERELARMMVQRDVVMEISKGK 248
Score = 92.1 bits (225), Expect = 6e-18
Identities = 64/216 (29%), Positives = 110/216 (50%), Gaps = 10/216 (4%)
Query: 13 GKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIVGGVEVAKDPL-- 70
G + +KG+SF +++GEI G+ G G+G+ L+GI +GK+ + G +V K P
Sbjct: 268 GLDAVKGVSFELREGEILGIAGVQGNGQRELAEALAGIRIPEKGKIELLGKDVTKLPAHE 327
Query: 71 QVKRIVGYVPETP--ALYESLTPAEFFSFVGGVRGIPK-----DILEERVRKLVEAFEIK 123
+ K + YVP++ L + E R + K D E ++VE FE+
Sbjct: 328 RYKSGLAYVPDSRRVGLVLDMNVVENVVLTNLSRVLHKGRISWDKANEMTNEVVEKFEVL 387
Query: 124 KYMNQL-IGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKEEG 182
+ I LS G +QK+ + ++ +PKV+++ E GLD + R+ L + ++E
Sbjct: 388 LSSTKAPIKHLSGGNQQKVMVGREIIREPKVIVVSEPTQGLDIGATEFIRKTLLKLRDER 447
Query: 183 KSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEE 218
K I+ + L + DRV +IY+G+I++ G EE
Sbjct: 448 KGILLISTDLDEILQLSDRVAVIYEGKIMSIGKTEE 483
>pir||C75077 iron (iii) abc transporter, ATP-binding protein (hemv-1) PAB0678 -
Pyrococcus abyssi (strain Orsay)
>gi|5458432|emb|CAB49920.1| (AJ248286) iron (III) ABC
transporter, ATP-binding protein (hemV-1) [Pyrococcus
abyssi]
Length = 257
Score = 104 bits (257), Expect = 1e-21
Identities = 74/258 (28%), Positives = 137/258 (52%), Gaps = 20/258 (7%)
Query: 1 MIIVENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIV 60
+I V NL + GK VL+G++F V +GE +LGPNG+GK+T +R ++GI+ +G V V
Sbjct: 7 VIEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILK-CKGDVKV 65
Query: 61 GGVEVAK-DPLQVKRIVGYVPETPALYESLTPA--EFFSFV-------GGVRGIPKDILE 110
G + + L++ +++ YVP+ + P F FV G+ +D+
Sbjct: 66 FGKSIRDMNRLELAKLLAYVPQR------VEPGFLRVFDFVLLGRRPYMGLSPRREDL-- 117
Query: 111 ERVRKLVEAFEIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARI 170
E VR+ ++ ++++ ++++ TLS G QK+++ ++ + V++LDE N LDPKS
Sbjct: 118 EAVRRALKLLRVEEFEDRVMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQID 177
Query: 171 FRELLYEFKEEGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKEERLED 230
++ + EGK+++ H L LA ++ + G + T +EL++ E
Sbjct: 178 VMRIIKDLIGEGKTVITVMHDLTLALRFGEKFLFLKDGEVTGIMTRDELEDRVLSETY-G 236
Query: 231 VFLKLTQAKEEIAQVVSA 248
+ +K+ + EI +V A
Sbjct: 237 ISVKVAKLGREIVPLVGA 254
>pir||C75593 probable ABC transporter, ATP-binding protein - Deinococcus
radiodurans (strain R1)
>gi|6460585|gb|AAF12291.1|AE001862_117 (AE001862) ABC
transporter, ATP-binding protein, putative [Deinococcus
radiodurans]
Length = 301
Score = 103 bits (255), Expect = 2e-21
Identities = 71/246 (28%), Positives = 126/246 (50%), Gaps = 8/246 (3%)
Query: 5 ENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIVGGVE 64
E + K +G L + T++ GE+ LLGPNG+GKST + +L G+ G+V V G +
Sbjct: 6 EQVSKTYGHVTALSDFNLTLRTGELTALLGPNGAGKSTAIGLLLGLSAPSAGQVRVLGAD 65
Query: 65 VAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAFEIKK 124
++ ++ + +G +P+ AL LT E + P + E + ++
Sbjct: 66 PRRNDVRAR--IGAMPQESALPAGLTVREAVTLFASFYPAPLGVDEA-----LALADLGP 118
Query: 125 YMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKEEGKS 184
+ LS G K++++ +++ DP++L++DE G+D +S F E + + G++
Sbjct: 119 VAGRRAAQLSGGQKRRLAFALAVVGDPELLLIDEPTTGMDAQSRAAFWEAVTGLRARGRT 178
Query: 185 IVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKEERLEDVFLKLTQAKEEIAQ 244
I+ +TH L AE DRV ++ GRI+A+ T + L+ R+ V L QA+ E
Sbjct: 179 ILLTTHYLEEAERTADRVVVMNGGRILADDTPQGLRSGVGGARVSFV-SDLVQAELERLP 237
Query: 245 VVSALK 250
VSA++
Sbjct: 238 GVSAVQ 243
>emb|CAB97433.1| (AL389898) putative glycine betaine ABC transport system
ATP-binding protein [Streptomyces coelicolor A3(2)]
Length = 394
Score = 102 bits (252), Expect = 4e-21
Identities = 71/252 (28%), Positives = 132/252 (52%), Gaps = 8/252 (3%)
Query: 7 LRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIVGGVEV- 65
LR R G + +SF V+ GE++ ++G +GSGKST +R L+ +I G +++ G +V
Sbjct: 53 LRSRTGCTAAVADVSFDVRKGEVFVVMGLSGSGKSTLVRCLTRLIEPTAGSIVIDGEDVR 112
Query: 66 AKDPLQVKRI----VGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAFE 121
A D +++ + V + L T + ++ V+G+ + ER +V
Sbjct: 113 AMDRSRLRELRRHRAAMVFQHFGLLPHRTVLDNVAYGLEVQGMGRAERRERAAAIVAKVG 172
Query: 122 IKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEF-KE 180
++ + G LS G +Q++ L +L DP+VL+ DE + LDP R +E + +E
Sbjct: 173 LEGLEQRRPGQLSGGQRQRVGLARALAVDPEVLLFDEPFSALDPLIRRDMQEEVVRLHRE 232
Query: 181 EGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKEERLEDVFLKLTQAKE 240
EG+++VF TH L A + DR+ ++ GR++ GT EE+ ++ + + + +E
Sbjct: 233 EGRTMVFITHDLQEALKLGDRIALMRDGRVVQLGTPEEIVGSPADDYVREFVRDV--PRE 290
Query: 241 EIAQVVSALKEA 252
++ V +A++ A
Sbjct: 291 QVLTVRTAMRPA 302
>pir||F75377 ABC transporter, ATP-binding protein - Deinococcus radiodurans
(strain R1) >gi|6459346|gb|AAF11143.1|AE002002_1
(AE002002) ABC transporter, ATP-binding protein
[Deinococcus radiodurans]
Length = 346
Score = 101 bits (250), Expect = 7e-21
Identities = 62/231 (26%), Positives = 119/231 (50%), Gaps = 2/231 (0%)
Query: 15 EVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIVGGVEVAKDPLQ-VK 73
+ +K +SF + GE+ G LGPNG+GK+TT+++LSG++ G V V G E + + ++
Sbjct: 44 DAVKSVSFDLAPGEVVGFLGPNGAGKTTTLKMLSGLLHPSGGSVEVLGFEPRRRQREYLR 103
Query: 74 RIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAFEIKKYMNQLIGTL 133
++ + + L L + F + IP +R+ E ++ + + + L
Sbjct: 104 QMTLVMGQKQQLIWDLPALDSFLVNQAIYEIPDAQYHATMREFTEVLGLEGILKKQVRKL 163
Query: 134 SFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEF-KEEGKSIVFSTHVL 192
S G + K L ++LLH PK+L LDE GLD RE + E+ ++E +++ ++H +
Sbjct: 164 SLGERMKCELAAALLHRPKILFLDEPTIGLDVNMQEAVREFVREYNRKEQATVMLTSHYM 223
Query: 193 ALAELICDRVGIIYQGRIIAEGTVEELKEISKEERLEDVFLKLTQAKEEIA 243
A + R+ +I G+++ +G + L E + + L+ + E++A
Sbjct: 224 ADVTALARRILVIDAGQLVFDGDLASLAEQGSGGKTIRLQLRRPVSAEQLA 274
>sp|P54954|YXEO_BACSU PROBABLE AMINO-ACID ABC TRANSPORTER ATP-BINDING PROTEIN YXEO
>gi|7442525|pir||A70076 ABC-type transport protein yxeO
- Bacillus subtilis >gi|1408500|dbj|BAA08331.1| (D45912)
homologous to GlnQ glutamine transport ATP-binding
protein of Bacillus stearothermophilus, belonging to the
ATP-binding cassette (ABC) family [Bacillus subtilis]
>gi|2636494|emb|CAB15984.1| (Z99124) similar to amino
acid ABC transporter (ATP-binding protein) [Bacillus
subtilis]
Length = 249
Score = 99.8 bits (245), Expect = 3e-20
Identities = 68/252 (26%), Positives = 126/252 (49%), Gaps = 13/252 (5%)
Query: 1 MIIVENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIV 60
MI V+N+RK F VL GI VK GE+ ++GP+GSGKST +R L+ + +G + +
Sbjct: 1 MITVKNIRKAFKDLVVLDGIDLEVKRGEVVAIIGPSGSGKSTLLRCLNLLERPDQGLIEI 60
Query: 61 GGVEVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAF 120
G ++ + K +T ++++ F ++ I + ++ + + EA
Sbjct: 61 GEAKLNAEKFTRKEAHRLRQQTAMVFQNYN---LFKNKTALQNITEALIVAQHKPRDEAK 117
Query: 121 EIKKYMNQLIG----------TLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARI 170
I + + +G T+S G +Q+I + +L +P ++LDE + LDP+
Sbjct: 118 RIGMEILKQVGLEHKADSYPITMSGGQQQRIGIARALAVNPHAILLDEPTSALDPELVTG 177
Query: 171 FRELLYEFKEEGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKEERLED 230
+++ E+ +++ TH +A A+ + D+V + G II +GT EEL + K ER +
Sbjct: 178 VLQVIKSIAEKQTTMIIVTHEMAFAKEVADQVIFMADGHIIEQGTPEELFDHPKNERTKR 237
Query: 231 VFLKLTQAKEEI 242
++ + E I
Sbjct: 238 FIKQVGEPAELI 249
>pir||E83478 probable ATP-binding component of ABC transporter PA1339 [imported]
- Pseudomonas aeruginosa (strain PAO1)
>gi|9947279|gb|AAG04728.1|AE004563_5 (AE004563) probable
ATP-binding component of ABC transporter [Pseudomonas
aeruginosa]
Length = 244
Score = 99.5 bits (244), Expect = 3e-20
Identities = 65/250 (26%), Positives = 132/250 (52%), Gaps = 12/250 (4%)
Query: 1 MIIVENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIV 60
MI ++N+ K +G +VL S V GE+ + GP+GSGKST ++ ++ + +G ++V
Sbjct: 1 MISIKNVSKWYGDFQVLTDCSTEVAKGEVVVVCGPSGSGKSTLIKCVNALEPFQKGDIVV 60
Query: 61 GGVEVAKDPLQVKRI---VGYVPETPALYESLTPAEFFSFVG-GVRGIPKDILEERVRKL 116
G +A + ++ VG V + L+ L+ E + V G K+ ++ L
Sbjct: 61 DGTSIADPKTNLPKLRSRVGMVFQHFELFPHLSITENLTIAQIKVLGRSKEEATKKGLAL 120
Query: 117 VEAFEIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLY 176
+E +K++ ++ G LS G +Q++++ +L DP V++ DE + LDP+ +++
Sbjct: 121 LERVGLKEHAHKHPGQLSGGQQQRVAIARALAMDPVVMLFDEPTSALDPEMVNEVLDVMV 180
Query: 177 EFKEEGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKEERLEDVFLKLT 236
+ EG +++ TH + A + +RV + +G+I+ ++ KEE DV +
Sbjct: 181 QLAHEGMTMMCVTHEMGFARKVANRVIFMDRGQIV--------EDCEKEEFFGDVSARSE 232
Query: 237 QAKEEIAQVV 246
+A++ +A+++
Sbjct: 233 RAQQFLAKIL 242
>pdb|1B0U|A Chain A, Atp-Binding Subunit Of The Histidine Permease From
Salmonella Typhimurium
Length = 262
Score = 99.1 bits (243), Expect = 5e-20
Identities = 76/254 (29%), Positives = 127/254 (49%), Gaps = 17/254 (6%)
Query: 4 VENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIVGGV 63
V +L KR+GG EVLKG+S + G++ ++G +GSGKST +R ++ + EG +IV G
Sbjct: 9 VIDLHKRYGGHEVLKGVSLQARAGDVISIIGSSGSGKSTFLRCINFLEKPSEGAIIVNGQ 68
Query: 64 EVA-------------KDPLQVKRI-VGYVPETPALYESLTPAE-FFSFVGGVRGIPKDI 108
+ K+ L++ R + V + L+ +T E V G+ K
Sbjct: 69 NINLVRDKDGQLKVADKNQLRLLRTRLTMVFQHFNLWSHMTVLENVMEAPIQVLGLSKHD 128
Query: 109 LEERVRKLVEAFEI-KKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKS 167
ER K + I ++ + LS G +Q++S+ +L +P VL+ DE + LDP+
Sbjct: 129 ARERALKYLAKVGIDERAQGKYPVHLSGGQQQRVSIARALAMEPDVLLFDEPTSALDPEL 188
Query: 168 ARIFRELLYEFKEEGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKEER 227
++ + EEGK++V TH + A + V ++QG+I EG E++ + R
Sbjct: 189 VGEVLRIMQQLAEEGKTMVVVTHEMGFARHVSSHVIFLHQGKIEEEGDPEQVFGNPQSPR 248
Query: 228 LEDVFLKLTQAKEE 241
L+ FLK + K E
Sbjct: 249 LQQ-FLKGSLKKLE 261
>gb|AAK43187.1| ABC transporter, ATP binding protein, putative [Sulfolobus
solfataricus]
Length = 291
Score = 99.1 bits (243), Expect = 5e-20
Identities = 71/247 (28%), Positives = 127/247 (50%), Gaps = 13/247 (5%)
Query: 6 NLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIVGGVEV 65
NL KR+G EVL G++F++++ I ++GPNG+GKST ++I+ G+I G + V G E
Sbjct: 8 NLTKRYGDIEVLHGLTFSIEEKSITLVIGPNGAGKSTLLKIIGGLINRTSGYISVLG-ED 66
Query: 66 AKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAFEIKKY 125
+ ++ R VG + + P L LT + V P ++L+E F + +
Sbjct: 67 PWNSNKIPRKVGIILDRPFLPPYLTVIDIVKEVSSEFSYPL----SDAKRLLEDFNLVHF 122
Query: 126 MNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSA-RIFRELLYEFKEEGKS 184
M + LS GTKQK+ ++ SL+ +P+++I DE LD S ++ ++ G +
Sbjct: 123 MKNKVRELSAGTKQKLQIVFSLIKNPEIIIADEPTANLDITSRYEVYNTFAVLREKMGLT 182
Query: 185 IVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKEERLEDVFLKLTQAKEEIAQ 244
++ S+H+ A V I G + G V++L + LE+ ++ + + I +
Sbjct: 183 VLISSHIPAEILAFSTHVLAINNGIMKFFGKVDKL---LRNNFLEEFYIVV----DNIGK 235
Query: 245 VVSALKE 251
+ ALK+
Sbjct: 236 ALEALKD 242
>pir||D35718 phnC protein - Escherichia coli >gi|147196|gb|AAA24339.1| (J05260)
HisP-like nucleotide binding protein (phnC) [Escherichia
coli]
Length = 262
Score = 99.1 bits (243), Expect = 5e-20
Identities = 68/259 (26%), Positives = 130/259 (49%), Gaps = 24/259 (9%)
Query: 1 MIIVENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIIT-------- 52
+I VE L K F + L + + GE+ LLGP+GSGKST +R LSG+IT
Sbjct: 4 IIRVEKLAKTFNQHQALHAVDLNIHHGEMVALLGPSGSGKSTLLRHLSGLITGDKSAGSH 63
Query: 53 -DFEGKVIVGGVEVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIP------ 105
+ G+ + +A+D + + GY+ + L L+ E +G + P
Sbjct: 64 IELLGRTVQREGRLARDIRKSRANTGYIFQQFNLVNRLSVLENV-LIGALGSTPFWRTCF 122
Query: 106 KDILEERVRKLVEAFE---IKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNG 162
E+ ++ ++A + + +Q + TLS G +Q++++ +L+ KV++ DE +
Sbjct: 123 SWFTREQKQRALQALTRVGMVHFAHQRVSTLSGGQQQRVAIARALMQQAKVILADEPIAS 182
Query: 163 LDPKSARIFRELLYEFKE-EGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKE 221
LDP+SARI + L + + +G ++V + H + A C+R+ + QG + +G+ ++
Sbjct: 183 LDPESARIVMDTLRDINQNDGITVVVTLHQVDYALRYCERIVALRQGHVFYDGSSQQF-- 240
Query: 222 ISKEERLEDVFLKLTQAKE 240
ER + ++ + + +E
Sbjct: 241 --DNERFDHLYRSINRIEE 257
>sp|P16677|PHNC_ECOLI PHOSPHONATES TRANSPORT ATP-BINDING PROTEIN PHNC
>gi|7445925|pir||A65220 phosphonates transport
ATP-binding protein phnC - Escherichia coli (strain
K-12) >gi|216591|dbj|BAA14262.1| (D90227) ATP-binding
protein [Escherichia coli] >gi|536950|gb|AAA97005.1|
(U14003) HisP-like nucleotide binding protein
(ATP-binding protein) [Escherichia coli]
>gi|1790544|gb|AAC77067.1| (AE000482) ATP-binding
component of phosphonate transport [Escherichia coli
K12]
Length = 262
Score = 99.1 bits (243), Expect = 5e-20
Identities = 67/259 (25%), Positives = 128/259 (48%), Gaps = 24/259 (9%)
Query: 1 MIIVENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIIT-------- 52
+I VE L K F + L + + GE+ LLGP+GSGKST +R LSG+IT
Sbjct: 4 IIRVEKLAKTFNQHQALHAVDLNIHHGEMVALLGPSGSGKSTLLRHLSGLITGDKSVGSH 63
Query: 53 -DFEGKVIVGGVEVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIP------ 105
+ G+ + +A+D + + GY+ + L L+ E +G + P
Sbjct: 64 IELLGRTVQREGRLARDIRKSRAHTGYIFQQFNLVNRLSVLENV-LIGALGSTPFWRTCF 122
Query: 106 ---KDILEERVRKLVEAFEIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNG 162
++R + + + + +Q + TLS G +Q++++ +L+ KV++ DE +
Sbjct: 123 SWFTGEQKQRALQALTRVGMVHFAHQRVSTLSGGQQQRVAIARALMQQAKVILADEPIAS 182
Query: 163 LDPKSARIFRELLYEFKE-EGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKE 221
LDP+SARI + L + + +G ++V + H + A C+R+ + QG + +G+ ++
Sbjct: 183 LDPESARIVMDTLRDINQNDGITVVVTLHQVDYALRYCERIVALRQGHVFYDGSSQQF-- 240
Query: 222 ISKEERLEDVFLKLTQAKE 240
ER + ++ + + +E
Sbjct: 241 --DNERFDHLYRSINRVEE 257
>sp|P04983|RBSA_ECOLI RIBOSE TRANSPORT ATP-BINDING PROTEIN RBSA >gi|78831|pir||B26304
ribose transport protein rbsA - Escherichia coli
>gi|147513|gb|AAA51473.1| (M13169) high affinity ribose
transport protein [Escherichia coli]
>gi|1790190|gb|AAC76772.1| (AE000452) ATP-binding
component of D-ribose high-affinity transport system
[Escherichia coli K12]
Length = 501
Score = 98.7 bits (242), Expect = 6e-20
Identities = 78/261 (29%), Positives = 127/261 (47%), Gaps = 13/261 (4%)
Query: 1 MIIVENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIV 60
++ ++ + K F G + L G + V G + L+G NG+GKST M++L+GI T G ++
Sbjct: 4 LLQLKGIDKAFPGVKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYTRDAGTLLW 63
Query: 61 GGVEVA-KDPLQVKRI-VGYVPETPALYESLTPAEFF----SFVGGVRGIPKDILEERVR 114
G E P + +G + + L LT AE FV I +
Sbjct: 64 LGKETTFTGPKSSQEAGIGIIHQELNLIPQLTIAENIFLGREFVNRFGKIDWKTMYAEAD 123
Query: 115 KLVEAFEIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGL-DPKSARIFRE 173
KL+ ++ ++L+G LS G +Q + + L + KV+I+DE + L D ++ +FR
Sbjct: 124 KLLAKLNLRFKSDKLVGDLSIGDQQMVEIAKVLSFESKVIIMDEPTDALTDTETESLFR- 182
Query: 174 LLYEFKEEGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKEE-----RL 228
++ E K +G+ IV+ +H + ICD V + G+ IAE V L E S E +L
Sbjct: 183 VIRELKSQGRGIVYISHRMKEIFEICDDVTVFRDGQFIAEREVASLTEDSLIEMMVGRKL 242
Query: 229 EDVFLKLTQAKEEIAQVVSAL 249
ED + L +A +I V L
Sbjct: 243 EDQYPHLDKAPGDIRLKVDNL 263
Score = 88.2 bits (215), Expect = 9e-17
Identities = 64/213 (30%), Positives = 109/213 (51%), Gaps = 16/213 (7%)
Query: 20 ISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIVGGVEVAKDPLQ--VKRIVG 77
+SFT++ GEI G+ G G+G++ M++L G + G V + G EV Q + +
Sbjct: 271 VSFTLRKGEILGVSGLMGAGRTELMKVLYGALPRTSGYVTLDGHEVVTRSPQDGLANGIV 330
Query: 78 YVPETP---------ALYE--SLTPAEFFSFVGGVRGIPKDILEERVRKLVEAFEIKK-Y 125
Y+ E ++ E SLT +FS GG + ++ V + F +K
Sbjct: 331 YISEDRKRDGLVLGMSVKENMSLTALRYFSRAGG--SLKHADEQQAVSDFIRLFNVKTPS 388
Query: 126 MNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKEEGKSI 185
M Q IG LS G +QK+++ L+ PKVLILDE G+D + + +L+ +FK +G SI
Sbjct: 389 MEQAIGLLSGGNQQKVAIARGLMTRPKVLILDEPTRGVDVGAKKEIYQLINQFKADGLSI 448
Query: 186 VFSTHVLALAELICDRVGIIYQGRIIAEGTVEE 218
+ + + + DR+ ++++G + E T E+
Sbjct: 449 ILVSSEMPEVLGMSDRIIVMHEGHLSGEFTREQ 481
>gb|AAA62102.1| (L10328) high affinity ribose transport protein [Escherichia coli]
Length = 501
Score = 98.7 bits (242), Expect = 6e-20
Identities = 78/261 (29%), Positives = 127/261 (47%), Gaps = 13/261 (4%)
Query: 1 MIIVENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIV 60
++ ++ + K F G + L G + V G + L+G NG+GKST M++L+GI T G ++
Sbjct: 4 LLQLKGIDKAFPGVKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYTRDAGTLLW 63
Query: 61 GGVEVA-KDPLQVKRI-VGYVPETPALYESLTPAEFF----SFVGGVRGIPKDILEERVR 114
G E P + +G + + L LT AE FV I +
Sbjct: 64 LGKETTFTGPKSSQEAGIGIIHQELNLIPQLTIAENIFLGREFVNRFGKIDWKTMYAEAD 123
Query: 115 KLVEAFEIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGL-DPKSARIFRE 173
KL+ ++ ++L+G LS G +Q + + L + KV+I+DE + L D ++ +FR
Sbjct: 124 KLLAKLNLRFKSDKLVGDLSIGDQQMVEIAKVLSFESKVIIMDEPTDALTDTETESLFR- 182
Query: 174 LLYEFKEEGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKEE-----RL 228
++ E K +G+ IV+ +H + ICD V + G+ IAE V L E S E +L
Sbjct: 183 VIRELKSQGRGIVYISHRMKEIFEICDDVTVFRDGQFIAEREVASLTEDSLIEMMVGRKL 242
Query: 229 EDVFLKLTQAKEEIAQVVSAL 249
ED + L +A +I V L
Sbjct: 243 EDQYPHLDKAPGDIRLKVDNL 263
Score = 88.2 bits (215), Expect = 9e-17
Identities = 64/213 (30%), Positives = 109/213 (51%), Gaps = 16/213 (7%)
Query: 20 ISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIVGGVEVAKDPLQ--VKRIVG 77
+SFT++ GEI G+ G G+G++ M++L G + G V + G EV Q + +
Sbjct: 271 VSFTLRKGEILGVSGLMGAGRTELMKVLYGALPRTSGYVTLDGHEVVTRSPQDGLANGIV 330
Query: 78 YVPETP---------ALYE--SLTPAEFFSFVGGVRGIPKDILEERVRKLVEAFEIKK-Y 125
Y+ E ++ E SLT +FS GG + ++ V + F +K
Sbjct: 331 YISEDRKRDGLVLGMSVKENMSLTALRYFSRAGG--SLKHADEQQAVSDFIRLFNVKTPS 388
Query: 126 MNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKEEGKSI 185
M Q IG LS G +QK+++ L+ PKVLILDE G+D + + +L+ +FK +G SI
Sbjct: 389 MEQAIGLLSGGNQQKVAIARGLMTRPKVLILDEPTRGVDVGAKKEIYQLINQFKADGLSI 448
Query: 186 VFSTHVLALAELICDRVGIIYQGRIIAEGTVEE 218
+ + + + DR+ ++++G + E T E+
Sbjct: 449 ILVSSEMPEVLGMSDRIIVMHEGHLSGEFTREQ 481
>gb|AAD29104.1|AF039835_1 (AF039835) ATPase homolog GbuA [Listeria monocytogenes]
Length = 397
Score = 98.7 bits (242), Expect = 6e-20
Identities = 66/240 (27%), Positives = 131/240 (54%), Gaps = 6/240 (2%)
Query: 6 NLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIVGGVEV 65
++ K G + SF+V++GEI+ ++G +GSGKST +R+L+ +I GK+ + G E+
Sbjct: 32 DILKETGATIGVNKASFSVEEGEIFVIMGLSGSGKSTLVRLLNRLIEPTSGKIWLDGKEL 91
Query: 66 A----KDPLQVKR-IVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAF 120
+ K+ L+V+R + V + L+ + T + ++G+ K+ E+ + +
Sbjct: 92 SSLNKKELLEVRRKSMSMVFQNFGLFPNRTINRNVEYGLEIQGMDKEEREKNAAESLALV 151
Query: 121 EIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKE 180
+ Y +Q LS G +Q++ L +L ++P +L++DEA + LDP + + ++ L + ++
Sbjct: 152 GLAGYGDQYPSQLSGGMQQRVGLARALANNPDILLMDEAFSALDPLNRKDMQDQLLDLQD 211
Query: 181 E-GKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKEERLEDVFLKLTQAK 239
+ K+I+F TH L A I D + I+ G ++ G+ EE+ E +E + ++K
Sbjct: 212 KMKKTIIFITHDLDEALRIGDHIMIMRDGSVVQTGSPEEILAHPANEYVEKFIEDVDRSK 271
>sp|P14175|PROV_ECOLI GLYCINE BETAINE/L-PROLINE TRANSPORT ATP-BINDING PROTEIN PROV
>gi|72467|pir||BVECPV glycine betaine/L-proline
transport ATP-binding protein proV - Escherichia coli
>gi|147373|gb|AAA24427.1| (M24856) proV peptide
[Escherichia coli] >gi|1789032|gb|AAC75724.1| (AE000352)
ATP-binding component of transport system for glycine,
betaine and proline [Escherichia coli K12]
>gi|1800065|dbj|BAA16542.1| (D90891) GLYCINE
BETAINE/L-PROLINE TRANSPORT ATP-BINDING PROTEIN PROV.
[Escherichia coli]
Length = 400
Score = 98.3 bits (241), Expect = 8e-20
Identities = 69/250 (27%), Positives = 133/250 (52%), Gaps = 11/250 (4%)
Query: 5 ENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIVGGVE 64
E + ++ G +K S +++GEI+ ++G +GSGKST +R+L+ +I G+V++ GV+
Sbjct: 32 EQILEKTGLSLGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEPTRGQVLIDGVD 91
Query: 65 VAK----DPLQVKR-IVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEA 119
+AK + +V+R + V ++ AL +T + +F + GI + E+ +
Sbjct: 92 IAKISDAELREVRRKKIAMVFQSFALMPHMTVLDNTAFGMELAGINAEERREKALDALRQ 151
Query: 120 FEIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFK 179
++ Y + LS G +Q++ L +L +P +L++DEA + LDP ++ L + +
Sbjct: 152 VGLENYAHSYPDELSGGMRQRVGLARALAINPDILLMDEAFSALDPLIRTEMQDELVKLQ 211
Query: 180 -EEGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKEERLEDVFLKLTQA 238
+ ++IVF +H L A I DR+ I+ G ++ GT +E+ + + F +
Sbjct: 212 AKHQRTIVFISHDLDEAMRIGDRIAIMQNGEVVQVGTPDEILNNPANDYVRTFFRGV--- 268
Query: 239 KEEIAQVVSA 248
+I+QV SA
Sbjct: 269 --DISQVFSA 276
>sp|O34900|YTMN_BACSU PROBABLE AMINO-ACID ABC TRANSPORTER ATP-BINDING PROTEIN YTMN
>gi|7442519|pir||F69641 histidine transport protein hisP
- Bacillus subtilis >gi|2293251|gb|AAC00329.1|
(AF008220) putative amino acid transporter [Bacillus
subtilis] >gi|2635399|emb|CAB14894.1| (Z99118) histidine
transport protein (ATP-binding protein) [Bacillus
subtilis] >gi|2635418|emb|CAB14912.1| (Z99119) histidine
transport protein (ATP-binding protein) [Bacillus
subtilis]
Length = 259
Score = 97.9 bits (240), Expect = 1e-19
Identities = 79/265 (29%), Positives = 135/265 (50%), Gaps = 26/265 (9%)
Query: 1 MIIVENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEG---- 56
MI ++N+ K+FG VLKGI+ TV+ GE+ ++GP+GSGK+T +R L+ + EG
Sbjct: 1 MIEIKNIHKQFGIHHVLKGINLTVRKGEVVTIIGPSGSGKTTFLRCLNLLERPDEGIISI 60
Query: 57 --KVIVGGVEVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGV---RGIPKD---- 107
KVI K+ +++ V + L+ T E + + G+ R + K
Sbjct: 61 HDKVINCRFPSKKEVHWLRKQTAMVFQQYHLFAHKTVIE--NVMEGLTIARKMRKQDAYA 118
Query: 108 ILEERVRKLVEAFEIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKS 167
+ E +RK+ ++ Y +QL G G KQ++ + +L P VL+ DE LDP+
Sbjct: 119 VAENELRKVGLQDKLNAYPSQLSG----GQKQRVGIARALAIHPDVLLFDEPTAALDPEL 174
Query: 168 ARIFRELLYEFKEEGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKEER 227
E++ E + G +++ TH + A + D+V + +G I+ +GT EE+ +K++R
Sbjct: 175 VGEVLEVMLEIVKTGATMIVVTHEMEFARRVSDQVVFMDEGVIVEQGTPEEVFRHTKKDR 234
Query: 228 LEDVFLK------LTQAKEEIAQVV 246
FL+ L + KE I + V
Sbjct: 235 TRQ-FLRRVSPEYLFEPKEHIKEPV 258
>sp|P17328|PROV_SALTY GLYCINE BETAINE/L-PROLINE TRANSPORT ATP-BINDING PROTEIN PROV
>gi|72466|pir||QREBVT glycine betaine/proline transport
protein proV - Salmonella typhimurium
>gi|47831|emb|CAA36921.1| (X52693) proV protein (AA
1-400) [Salmonella typhimurium]
Length = 400
Score = 97.5 bits (239), Expect = 1e-19
Identities = 69/250 (27%), Positives = 132/250 (52%), Gaps = 11/250 (4%)
Query: 5 ENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIVGGVE 64
E + ++ G +K S +++GEI+ ++G +GSGKST +R+L+ +I G+V++ GV+
Sbjct: 32 EQILEKTGLSLGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEPTRGQVLIDGVD 91
Query: 65 VAK----DPLQVKR-IVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEA 119
+AK + +V+R + V ++ AL +T + +F + GI E+ +
Sbjct: 92 IAKISDAELREVRRKKIAMVFQSFALMPHMTVLDNTAFGMELAGIAAQERREKALDALRQ 151
Query: 120 FEIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFK 179
++ Y + LS G +Q++ L +L +P +L++DEA + LDP ++ L + +
Sbjct: 152 VGLENYRHAYPDELSGGMRQRVGLARALAINPDILLMDEAFSALDPLIRTEMQDELVKLQ 211
Query: 180 -EEGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKEERLEDVFLKLTQA 238
+ ++IVF +H L A I DR+ I+ G ++ GT +E+ + + F +
Sbjct: 212 AKHQRTIVFISHDLDEAMRIGDRIAIMQNGEVVQVGTPDEILNNPANDYVRTFFRGV--- 268
Query: 239 KEEIAQVVSA 248
+I+QV SA
Sbjct: 269 --DISQVFSA 276
>pir||B45917 nucleotide-binding protein proV - Salmonella typhimurium (fragment)
>gi|552022|gb|AAA88621.1| (M26063) proV gene product
[Salmonella typhimurium]
Length = 290
Score = 97.5 bits (239), Expect = 1e-19
Identities = 69/250 (27%), Positives = 132/250 (52%), Gaps = 11/250 (4%)
Query: 5 ENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIVGGVE 64
E + ++ G +K S +++GEI+ ++G +GSGKST +R+L+ +I G+V++ GV+
Sbjct: 32 EQILEKTGLSLGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEPTRGQVLIDGVD 91
Query: 65 VAK----DPLQVKR-IVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEA 119
+AK + +V+R + V ++ AL +T + +F + GI E+ +
Sbjct: 92 IAKISDAELREVRRKKIAMVFQSFALMPHMTVLDNTAFGMELAGIAAQERREKALDALRQ 151
Query: 120 FEIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFK 179
++ Y + LS G +Q++ L +L +P +L++DEA + LDP ++ L + +
Sbjct: 152 VGLENYAHAYPDELSGGMRQRVGLARALAINPDILLMDEAFSALDPLIRTEMQDELVKLQ 211
Query: 180 -EEGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKEERLEDVFLKLTQA 238
+ ++IVF +H L A I DR+ I+ G ++ GT +E+ + + F +
Sbjct: 212 AKHQRTIVFISHDLDEAMRIGDRIAIMQNGEVVQVGTPDEILNNPANDYVRTFFRGV--- 268
Query: 239 KEEIAQVVSA 248
+I+QV SA
Sbjct: 269 --DISQVFSA 276
>pir||G72418 sugar ABC transporter, ATP-binding protein - Thermotoga maritima
(strain MSB8) >gi|4980593|gb|AAD35197.1|AE001696_11
(AE001696) sugar ABC transporter, ATP-binding protein
[Thermotoga maritima]
Length = 507
Score = 97.1 bits (238), Expect = 2e-19
Identities = 70/259 (27%), Positives = 135/259 (52%), Gaps = 11/259 (4%)
Query: 2 IIVENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIVG 61
++++ + KRF G + V+ GEI+ ++G NG+GK+T M+ L G++ EG++ +
Sbjct: 5 VVMKRIVKRFPGVLANDHVDLFVEKGEIHAIVGENGAGKTTLMKQLYGLLKPDEGEIYIN 64
Query: 62 G--VEVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGV---RGIPKDILEER--VR 114
G VE + +K +G V + L ++LT E + + G+ +GI D + R V+
Sbjct: 65 GKRVEFSGPADAIKSGIGMVHQHFMLVDNLTAYE--NVIIGMEPRKGILLDRKKARKEVK 122
Query: 115 KLVEAFEIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFREL 174
+L E + + ++ I + G +Q++ +I +L ++LILDE L P+ E+
Sbjct: 123 RLSEEYGLTIDVDMKIEDMPVGLQQRVEIIKTLYRGAEILILDEPTAVLTPQETEELFEV 182
Query: 175 LYEFKEEGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEEL--KEISKEERLEDVF 232
L K+ GK+I+F +H L I DR+ ++ QGR+ + +EI++ DV
Sbjct: 183 LKRLKKSGKTIIFISHKLNEVMEISDRITVMRQGRVTGNLITSQTTPQEIARLMVGRDVV 242
Query: 233 LKLTQAKEEIAQVVSALKE 251
L + + +E + + +++
Sbjct: 243 LTVEKKPKEAGETLLKIED 261
Score = 73.7 bits (178), Expect = 2e-12
Identities = 61/236 (25%), Positives = 119/236 (49%), Gaps = 20/236 (8%)
Query: 15 EVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIVGGVEVAK-DPLQVK 73
+ +KG+SF VK GEI G+ G G+G+S + ++G+ G+V G ++ DP +++
Sbjct: 271 DAVKGVSFEVKRGEIVGIAGVAGNGQSELVEAITGLRGAERGRVYFKGEDITGYDPKRLR 330
Query: 74 RI-VGYVPETPALYESLT--PAEFFSFVGGVRGIP---------KDILEERVRKLVEAFE 121
+ + +VPE + PA F + +G P K+I + ++L E F+
Sbjct: 331 DLGMFHVPEDRLKRGLIVDFPAYFNTILGRHMIEPFVKSGFLNMKEI-KRFSKQLFEKFD 389
Query: 122 IK-KYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKE 180
I+ + + L G+ S G +QKI + + P++L++ + GLD + + L ++
Sbjct: 390 IRPRNIELLAGSFSGGNQQKIIVAREMSFSPELLVVAQPTRGLDVGAIEFIHKTLVSMRD 449
Query: 181 EGKSIVFSTHVLALAELICDRVGIIYQGRIIA-----EGTVEELKEISKEERLEDV 231
G ++ + L + DR+ ++Y+G+I+ E T EE+ + +RLE++
Sbjct: 450 AGVGVLLISMELDEIFSLSDRILVMYEGQIMGEVKPEETTPEEVGLMMAGKRLEEI 505
>gb|AAF53328.1| (AE003641) CG7491 gene product [Drosophila melanogaster]
Length = 324
Score = 96.7 bits (237), Expect = 2e-19
Identities = 70/254 (27%), Positives = 132/254 (51%), Gaps = 17/254 (6%)
Query: 2 IIVENLRKRFGGKE----VLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGK 57
II+ L K+F + + ++ T+ + EI LLG NG+GK+T M ++ G++ GK
Sbjct: 18 IIITELCKKFQTSKRDTLISDNLNMTINNKEITVLLGHNGAGKTTMMNMIMGLVPKDSGK 77
Query: 58 VIVGGVEVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGI----PKDILEERV 113
+IV +D + ++G+ P+ +T + F +RG +D +E++
Sbjct: 78 IIVCS---ERDVASYRHLIGFCPQHSVFMSYMTCHQHLEFFAQLRGACRSDARDWADEKL 134
Query: 114 RKLVEAFEIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRE 173
+KL + N+ LS G K+++SL ++ + K++ILDE +GLD S R +
Sbjct: 135 KKL----GLSDKRNEFGKNLSGGMKRRLSLGIAIAGNTKIVILDEPSSGLDINSRRELWD 190
Query: 174 LLYEFKEEGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISK-EERLEDVF 232
+L ++E K+++ +TH + AE++ D + I+ G++ + G+ ELK S RL+
Sbjct: 191 ILLNLRKE-KAVLVTTHYMEEAEVLGDTICILANGKLQSIGSPLELKRKSGIGYRLKLEI 249
Query: 233 LKLTQAKEEIAQVV 246
T + EI +++
Sbjct: 250 NDFTSREVEIMEII 263
>pir||C64496 ABC transporter ATP-binding protein - Methanococcus jannaschii
>gi|1592193|gb|AAB99589.1| (U67597) cobalt transport
ATP-binding protein (cbiO) [Methanococcus jannaschii]
Length = 278
Score = 96.0 bits (235), Expect = 4e-19
Identities = 70/263 (26%), Positives = 129/263 (48%), Gaps = 33/263 (12%)
Query: 13 GKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIVGGVEVAKDPLQV 72
G L ++ + E+ +LGPNG+GK+T ++IL G++ +G+V G ++ + L+
Sbjct: 17 GSIALDNVNLNIYKNEVVAILGPNGAGKTTLLKILDGLVFPDKGEVYFEGKKLTDEILRD 76
Query: 73 KRI-------VGYVPETPALY---------ESLTPAEFFSFVGGVRGIPKDILEERVRKL 116
K + VG+V + P + + +P +S + K + + ++ L
Sbjct: 77 KELMKEFRRKVGFVFQNPDVMLFNPTVWDEVAFSPLHLYSKEKAIEVTDKTLKDMKIYHL 136
Query: 117 VEAFEIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLY 176
+ LS G K+K+S+ L +P+V+++DE + LDPKS L+
Sbjct: 137 KDRHPYN---------LSGGEKKKVSISCILSVEPEVILMDEPTSALDPKSRAEIMNLIK 187
Query: 177 EFKEEGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKEE------RLED 230
FKE GK++V TH L LA + DR ++ + ++I EG V++L ++ +E +
Sbjct: 188 SFKECGKTVVLVTHDLNLA-CLADRCYVLNK-KVIFEGKVKDLFSLNLDELNLDVPEISK 245
Query: 231 VFLKLTQAKEEIAQVVSALKEAL 253
+F+KL I ++ L EA+
Sbjct: 246 LFIKLKNMGYNINEIPVTLDEAV 268
>sp|Q57855|Y412_METJA HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PROTEIN MJ0412
>gi|2129162|pir||D64351 nitrate transport ATP-binding
protein - Methanococcus jannaschii
>gi|1591118|gb|AAB98401.1| (U67493) nitrate transporter
protein (nrtC) homolog (cmpC) [Methanococcus jannaschii]
Length = 267
Score = 94.8 bits (232), Expect = 9e-19
Identities = 70/248 (28%), Positives = 133/248 (53%), Gaps = 13/248 (5%)
Query: 4 VENLRK--RFGGKEV--LKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVI 59
VENL K F G V L I+ V + E ++GP+G GK+T +RI++G+ EGKV+
Sbjct: 19 VENLTKIFEFNGNRVKALDNINLEVYENEFLTVMGPSGCGKTTLLRIIAGLDYPTEGKVL 78
Query: 60 VGGVEVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEA 119
+ G EV K P + G V + L T + +F ++GIPK+ E +K ++
Sbjct: 79 LDGKEV-KGPGADR---GVVFQQYTLMPWRTVLKNVTFGLELKGIPKNERIEIAKKFIKM 134
Query: 120 FEIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFR-ELLYEF 178
++ + + LS G +Q++++ +L +DP+++++DE LD ++ I + ELL +
Sbjct: 135 VGLEGFEDAYPYQLSGGMQQRVAIARTLANDPEIVLMDEPFAALDAQTRNILQNELLKIW 194
Query: 179 KEEGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKEERLEDVFLKLTQA 238
++E K++ F TH + A + DRV ++ G ++E+ +I E + ++ +
Sbjct: 195 QKEKKTVFFVTHSVDEAVYLSDRVVVL----TARPGRIKEIVKIDLERPRDRTSIEFLEY 250
Query: 239 KEEIAQVV 246
+++I ++
Sbjct: 251 RKKILNIL 258
>pir||T47652 ABC transporter-like protein - Arabidopsis thaliana
>gi|7019646|emb|CAB75747.1| (AL132954) ABC
transporter-like protein [Arabidopsis thaliana]
Length = 725
Score = 94.8 bits (232), Expect = 9e-19
Identities = 77/270 (28%), Positives = 134/270 (49%), Gaps = 30/270 (11%)
Query: 7 LRKRFGG------KEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITD--FEGKV 58
LR+RFG K +L +S DG+I +LG +G+GKST + L+G + + G V
Sbjct: 84 LRRRFGFSRQNGVKTLLDDVSGEASDGDILAVLGASGAGKSTLIDALAGRVAEGSLRGSV 143
Query: 59 IVGGVEVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILE----ERVR 114
+ G +V + L +K I YV + L+ LT E F R +P+ + + ERV
Sbjct: 144 TLNGEKVLQSRL-LKVISAYVMQDDLLFPMLTVKETLMFASEFR-LPRSLSKSKKMERVE 201
Query: 115 KLVEAFEIKKYMNQLIGT-----LSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSAR 169
L++ ++ N +IG +S G ++++S+ ++HDP VL LDE +GLD +A
Sbjct: 202 ALIDQLGLRNAANTVIGDEGHRGVSGGERRRVSIGIDIIHDPIVLFLDEPTSGLDSTNAF 261
Query: 170 IFRELLYEFKEEGKSIVFSTH--VLALAELICDRVGIIYQGRIIAEGTVEEL-------- 219
+ ++L + G ++ S H + EL+ DR+ I+ +G+ + G+ L
Sbjct: 262 MVVQVLKRIAQSGSIVIMSIHQPSARIVELL-DRLIILSRGKSVFNGSPASLPGFFSDFG 320
Query: 220 KEISKEERLEDVFLKLTQAKEEIAQVVSAL 249
+ I ++E + + L L + E + AL
Sbjct: 321 RPIPEKENISEFALDLVRELEGSNEGTKAL 350
>dbj|BAB07378.1| (AP001519) teichoic acid ABC transporter (ATP-binding protein)
[Bacillus halodurans]
Length = 534
Score = 94.8 bits (232), Expect = 9e-19
Identities = 60/234 (25%), Positives = 117/234 (49%), Gaps = 15/234 (6%)
Query: 1 MIIVENLRKRFGGKE----VLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEG 56
++ EN+ F K LK +SF +K+GE+ G++G NG+GKST ++L+ I+T EG
Sbjct: 289 VVKAENIGMSFNFKNETFWALKNVSFDIKEGEVVGIIGHNGAGKSTLCKLLTKILTPDEG 348
Query: 57 KVIVGGVEVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKL 116
++ + G + ++ Y A L+ + G + GIPK+ + + +
Sbjct: 349 ELELSG--------ETTSLLSYGTGFNA---QLSGKDNVYLNGMLLGIPKERVAQEYPNI 397
Query: 117 VEAFEIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLY 176
V E++K+M++ + + S G K ++ + P + I+DEA++ D + E +
Sbjct: 398 VAFSELEKHMDKPVKSYSSGMKSRLGFSIAATLQPDIFIIDEALSTGDVAFQQKASEKIQ 457
Query: 177 EFKEEGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKEERLED 230
E E K+++ +H + E +C R + +G++ +G EE ++ K E+
Sbjct: 458 EMMERAKAVIIVSHSMKFVESVCTRAIWLEKGQVRFDGDPEEAVKLYKGPETEE 511
Score = 89.3 bits (218), Expect = 4e-17
Identities = 71/242 (29%), Positives = 115/242 (47%), Gaps = 24/242 (9%)
Query: 17 LKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIVGGVEVAKDPLQVKRIV 76
L+ + FT GEI G++G NG+GK+T ++LSGI+ EG++ V G R+
Sbjct: 65 LRNLDFTGYKGEILGIIGSNGAGKTTLCKMLSGILKPDEGELYVDG-----------RVS 113
Query: 77 GYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAFEIKKYMNQLIGTLSFG 136
+ LT E G + GI KD +++ + ++ E + +++Q + S G
Sbjct: 114 ALFSLGMGFKKELTGRENAYLNGMMLGIEKDQIDQFIDEIHEFSGLGSFIDQPMKYYSSG 173
Query: 137 TKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKEEGKSIVFSTHVLALAE 196
K ++ + +P++LILDEA+N D + + E + K ++ TH L A
Sbjct: 174 MKARLGFSVAAFLEPEILILDEALNTGDAAFGKKAAAKMKELVSKAKMVILVTHSLRYAR 233
Query: 197 LICDRVGIIYQGRIIAEGTVEELKEISKE----------ERLEDVFLKLTQAKEEIAQVV 246
CDR+ + +G I A G E+ E KE +RLE LK T+A + VV
Sbjct: 234 KNCDRLLWLDRGEIRAIGEPAEVIEKYKETIPVKVRRPRKRLE---LKKTEANVKERTVV 290
Query: 247 SA 248
A
Sbjct: 291 KA 292
>pir||T35450 ABC transporter ATP binding protein - Streptomyces coelicolor
>gi|3319738|emb|CAA19904.1| (AL031035) ABC transporter
ATP binding protein [Streptomyces coelicolor A3(2)]
Length = 348
Score = 94.4 bits (231), Expect = 1e-18
Identities = 71/245 (28%), Positives = 122/245 (48%), Gaps = 7/245 (2%)
Query: 1 MIIVENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIV 60
++ +E RFGG+ VL + V + E+ +LGP+GSGKST +R ++G+ G+V +
Sbjct: 5 LLSLEGATVRFGGRAVLDDVGLGVAEHEVVCVLGPSGSGKSTLLRAVAGLQPLDAGRVTL 64
Query: 61 GGVEVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAF 120
G + + P KR VG + + L+ A +F +RG + + RV +L++
Sbjct: 65 DGRDQSGVPAH-KREVGLMFQDHQLFPQRDVAGNIAFGPRMRGASRAEQQARVAELLQLV 123
Query: 121 EIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPK-SARIFRELLYEFK 179
+ + + LS G +Q+++L +L P++L+LDE + LD R+ EL F
Sbjct: 124 GLPGAARRSVAALSGGEQQRVALARALAPRPRLLMLDEPLGQLDRSLRERLVVELRELFG 183
Query: 180 EEGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKEERLEDVFLKLTQAK 239
G +++ TH A + DRV ++ GRI GT E+ +R D F+
Sbjct: 184 RLGTTVLAVTHDQGEAFALADRVVVMRDGRIAQSGTPLEV-----WQRPADAFVARFLGF 238
Query: 240 EEIAQ 244
E +A+
Sbjct: 239 ENVAE 243
>pir||S76273 hypothetical protein - Synechocystis sp. (strain PCC 6803)
>gi|1001500|dbj|BAA10125.1| (D64000) high-affinity
branched-chain amino acid transport ATP-binding protein
[Synechocystis sp.]
Length = 373
Score = 94.0 bits (230), Expect = 2e-18
Identities = 68/263 (25%), Positives = 132/263 (49%), Gaps = 18/263 (6%)
Query: 4 VENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIVGGV 63
+++L F G L ++F++ GE+ ++GPNG+GK+T + +++G + EG+V+ G
Sbjct: 8 IQDLTVSFDGFRALNHLTFSMNPGELRVIIGPNGAGKTTFLDVITGKVQPTEGRVLFQGK 67
Query: 64 EVAKDP-LQVKRI-VGYVPETPALYESLTPAEFF--------SFVGGVRGIPKDILEERV 113
++ K P ++ R+ VG +TP +Y +LT AE S G + G + V
Sbjct: 68 DIRKIPEYRIARLGVGRKFQTPRVYLNLTVAENLDLAVNRKKSVWGTLMGQATGAEQRSV 127
Query: 114 RKLVEAFEIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRE 173
L+E + + LS G KQ++ + + P +L++DE + GL + +
Sbjct: 128 GGLLETIGLTPKAHLAAALLSHGEKQRLEIGMLVAQSPTLLLVDEPVAGLTDEETENVGD 187
Query: 174 LLYEFKEEGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKEERLEDVFL 233
LL E SI+ H + I +V +++QG ++ EG ++ +I + ++ +V+L
Sbjct: 188 LLLAL-AESHSIIVIEHDMEFVRQIARKVTVLHQGSVLCEGNMD---QIQNDPKVIEVYL 243
Query: 234 ----KLTQAKEEIAQVVSALKEA 252
L+ + +I + V+A+ A
Sbjct: 244 GEAPSLSPQQFKILRTVAAVAAA 266
>sp|P42954|TAGH_BACSU TEICHOIC ACID TRANSLOCATION ATP-BINDING PROTEIN TAGH
>gi|2126894|pir||S69203 teichoic acid translocation
ATP-binding protein tagH - Bacillus subtilis
>gi|755153|gb|AAB03363.1| (U13832) ATP-binding protein
[Bacillus subtilis] >gi|2636096|emb|CAB15587.1| (Z99122)
ATP-binding protein [Bacillus subtilis]
Length = 527
Score = 92.1 bits (225), Expect = 6e-18
Identities = 66/226 (29%), Positives = 113/226 (49%), Gaps = 16/226 (7%)
Query: 17 LKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIVGGVEVAKDPLQVKRIV 76
++ +SF V +GE G +G NGSGKST +L+ II G++ + G P +
Sbjct: 39 VRNVSFDVYEGETIGFVGINGSGKSTMSNLLAKIIPPTSGEIEMNG-----QPSLIAIAA 93
Query: 77 GYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAFEIKKYMNQLIGTLSFG 136
G L LT + + G+ +++ +VE EI ++NQ + S G
Sbjct: 94 G-------LNNQLTGRDNVRLKCLMMGLTNKEIDDMYDSIVEFAEIGDFINQPVKNYSSG 146
Query: 137 TKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKEEGKSIVFSTHVLALAE 196
K ++ S+ DP +LI+DEA++ D + + + EFK++GK+I F +H + E
Sbjct: 147 MKSRLGFAISVHIDPDILIIDEALSVGDQTFYQKCVDRINEFKKQGKTIFFVSHSIGQIE 206
Query: 197 LICDRVGIIYQGRIIAEGTVEELKEISKE-ERLEDVFLKLTQAKEE 241
+CDRV ++ G + +E K + KE + D F KL++ ++E
Sbjct: 207 KMCDRVAWMHYGEL---RMFDETKTVVKEYKAFIDWFNKLSKKEKE 249
>pir||T00089 ABC transporter rgpDc - Streptococcus mutans
>gi|3399707|dbj|BAA32092.1| (AB010970) ABC-transporter
[Streptococcus mutans]
Length = 405
Score = 91.7 bits (224), Expect = 8e-18
Identities = 68/237 (28%), Positives = 118/237 (49%), Gaps = 14/237 (5%)
Query: 9 KRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIVGGVEVAKD 68
K + + VL+ I F V+ G+ +G++G NGSGKST ++I+S I +GKV V G V+
Sbjct: 39 KGYKKQHVLRDIDFEVEKGDFFGIVGRNGSGKSTLLKIISQIYVPEQGKVTVDGKLVS-- 96
Query: 69 PLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAFEIKKYMNQ 128
++ VG+ PE LT E G + G + ++ + +V+ E++ +MNQ
Sbjct: 97 --FIELGVGFNPE-------LTGRENVYMNGAMLGFTTEEVDTMYQDIVDFAELQDFMNQ 147
Query: 129 LIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKEEGKSIVFS 188
+ S G + +++ ++ VLILDE + D R + E K GK+ +
Sbjct: 148 KLKNYSSGMQVRLAFSVAIKAQGDVLILDEVLAVGDEAFQRKCNDYFLERKNSGKTTILV 207
Query: 189 THVLALAELICDRVGIIYQGRIIAEGTVEELKEISKEERLEDVFLKLTQAKEEIAQV 245
TH +A + C++ +I G I A G E +++ + L++ + +EE A V
Sbjct: 208 THDMAAVKKYCNKAVLIDDGLIKAIG---EPFDVANQYSLDNTDQIVEDKQEEEAAV 261
>dbj|BAB07449.1| (AP001519) ribose ABC transporter (ATP-binding protein) [Bacillus
halodurans]
Length = 499
Score = 91.3 bits (223), Expect = 1e-17
Identities = 75/266 (28%), Positives = 130/266 (48%), Gaps = 16/266 (6%)
Query: 2 IIVE--NLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVI 59
+IVE + K F G VLK +SFT++ GEI+ L+G NG+GKST M+IL+GI G V
Sbjct: 1 MIVEMTGIHKSFSGNPVLKDVSFTLEKGEIHALMGENGAGKSTLMKILTGIYERDSGTVK 60
Query: 60 VGGVEV-AKDPLQVKRI-VGYVPETPALYESLTPAEFFSFVGGVRGIPKD--ILEERVRK 115
+ G EV K P + + + + + + LT AE FVG R K I + + +
Sbjct: 61 IKGREVHYKHPKEAEADGLAVIHQELNILPELTVAENL-FVGKERTYGKTGWIKSKEMNR 119
Query: 116 LVE----AFEIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIF 171
L E +K + G LS G +Q I + +L+ + ++I+DE L +
Sbjct: 120 LAEEKLAELGLKVKGTERAGNLSVGKQQLIEIAKALMTNADIIIMDEPTAALTDREIDTL 179
Query: 172 RELLYEFKEEGKSIVFSTHVLALAELICDRVGIIYQG-----RIIAEGTVEELKEISKEE 226
+ E +++G + V+ +H + +C R+ ++ G ++IAE + +E+ ++
Sbjct: 180 FATVRELQKKGVTFVYISHRMEEIFSLCQRITVLRDGEYVGTKVIAETSFDEIVKMMVGR 239
Query: 227 RLEDVFLKLTQAKEEIAQVVSALKEA 252
L + F + T ++ + L A
Sbjct: 240 ALGNRFPEHTLTPGDVKLEIKHLTRA 265
>pir||A82497 ribose ABC transporter, ATP-binding protein VCA0128 [imported] -
Vibrio cholerae (group O1 strain N16961)
>gi|9657516|gb|AAF96042.1| (AE004354) ribose ABC
transporter, ATP-binding protein [Vibrio cholerae]
Length = 500
Score = 90.9 bits (222), Expect = 1e-17
Identities = 68/261 (26%), Positives = 122/261 (46%), Gaps = 13/261 (4%)
Query: 1 MIIVENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIV 60
++ + + K F G + L S V G + L+G NG+GKST M++L+GI + G +
Sbjct: 5 ILALSQIEKAFPGVKALDKASLNVYPGRVMALMGENGAGKSTLMKVLTGIYSKDAGSIEY 64
Query: 61 GGVEVAKDPLQVKRIVGY--VPETPALYESLTPAEFFSFVGGVRGIPK-----DILEERV 113
G V+ + ++ G + + L LT AE F+G P D + +
Sbjct: 65 QGQPVSFKGPRDSQLAGISIIHQELNLIPQLTIAENI-FLGREMTSPFGRILWDEMHRKA 123
Query: 114 RKLVEAFEIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRE 173
+L+ +K L+G LS G +Q + + +L + KV+I+DE + L
Sbjct: 124 DQLLARLNVKHSAKTLLGELSLGEQQMVEIAKALSFESKVIIMDEPTDALTDTETESLFN 183
Query: 174 LLYEFKEEGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTV-----EELKEISKEERL 228
++ E +E+G IV+ +H L ICD + ++ G+ I E V + L E+ +L
Sbjct: 184 VINELREQGCGIVYISHRLKEIFEICDDITVLRDGKFIGECRVCDTNEDGLIEMMVGRKL 243
Query: 229 EDVFLKLTQAKEEIAQVVSAL 249
E+ + ++ + +I+ V L
Sbjct: 244 EEQYPRIAAQQGDISLEVIGL 264
>gi|6679297 P glycoprotein 2 [Mus musculus] >gi|126929|sp|P21440|MDR2_MOUSE
MULTIDRUG RESISTANCE PROTEIN 2 (P-GLYCOPROTEIN 2)
>gi|72476|pir||DVMS2 multidrug resistance protein 2 -
mouse >gi|387428|gb|AAA39516.1| (J03398) multidrug
resistance protein [Mus musculus]
Length = 1276
Score = 90.1 bits (220), Expect = 2e-17
Identities = 66/214 (30%), Positives = 114/214 (52%), Gaps = 15/214 (7%)
Query: 16 VLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIVGGVEVAKDPLQVKRI 75
VL+G+S VK G+ L+G +G GKST +++L G V++ G E K +Q R
Sbjct: 1048 VLQGLSLEVKKGQTLALVGSSGCGKSTVVQLLERFYDPMAGSVLLDGQEAKKLNVQWLRA 1107
Query: 76 -VGYVPETPALYESLTPAEFFSFVGGVRGIPKDIL-----EERVRKLVEAFEIKKYMNQL 129
+G V + P L++ + AE ++ R +P D + E + +E +KY N
Sbjct: 1108 QLGIVSQEPILFDC-SIAENIAYGDNSRVVPHDEIVRAAKEANIHPFIETLP-QKY-NTR 1164
Query: 130 IGT----LSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKEEGKSI 185
+G LS G KQ+I++ +L+ P+VL+LDEA + LD +S ++ +E L + EG++
Sbjct: 1165 VGDKGTQLSGGQKQRIAIARALIRQPRVLLLDEATSALDTESEKVVQEAL-DKAREGRTC 1223
Query: 186 VFSTHVLALAELICDRVGIIYQGRIIAEGTVEEL 219
+ H L+ + D + +I G++ GT ++L
Sbjct: 1224 IVIAHRLSTIQ-NADLIVVIENGKVKEHGTHQQL 1256
Score = 89.3 bits (218), Expect = 4e-17
Identities = 66/242 (27%), Positives = 129/242 (53%), Gaps = 21/242 (8%)
Query: 15 EVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIVGGVEVAKDPLQ-VK 73
++LKG++ VK G+ L+G +G GKSTT+++L + EGK+ + G ++ ++ ++
Sbjct: 407 KILKGLNLKVKSGQTVALVGNSGCGKSTTVQLLQRLYDPTEGKISIDGQDIRNFNVRCLR 466
Query: 74 RIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAFE----IKKYMNQL 129
I+G V + P L+ S T AE + G + D +E+ V++ A++ + + + L
Sbjct: 467 EIIGVVSQEPVLF-STTIAENIRY--GRGNVTMDEIEKAVKE-ANAYDFIMKLPQKFDTL 522
Query: 130 IG----TLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKEEGKSI 185
+G LS G KQ+I++ +L+ +PK+L+LDEA + LD +S + L + +E +I
Sbjct: 523 VGDRGAQLSGGQKQRIAIARALVRNPKILLLDEATSALDTESEAEVQAALDKAREGRTTI 582
Query: 186 VFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKEERLEDVFLKLTQAKEEIAQV 245
V + + + D + G I+ +G+ EL + E ++ +L + +Q+
Sbjct: 583 VIAHRLSTIRN--ADVIAGFEDGVIVEQGSHSELM------KKEGIYFRLVNMQTAGSQI 634
Query: 246 VS 247
+S
Sbjct: 635 LS 636
>gb|AAD05298.1| (AF082511) putative ATP-binding protein MglA [Treponema denticola]
Length = 497
Score = 90.1 bits (220), Expect = 2e-17
Identities = 67/264 (25%), Positives = 125/264 (46%), Gaps = 21/264 (7%)
Query: 4 VENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIVGGV 63
++NL K FG +VL GI+ TV+ G + GL+G NG+GKST M+ L GI T EG + +
Sbjct: 8 IKNLSKSFGKNKVLDGINLTVRQGSVMGLMGENGAGKSTMMKCLFGIYTRDEGAISLLNK 67
Query: 64 EV----AKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDI-LEERVRKLVE 118
+ K+ L+ + + L ++T F GI +I + E L
Sbjct: 68 SIEFKNPKEALESGVAMVHQELNLCLDRTVTDNLFLGRYPTNFGIVDEIKMFESASSLFS 127
Query: 119 AFEIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEF 178
+ + ++ T+S +Q + + ++ ++ K+++LDE + L + + ++
Sbjct: 128 SLNMNVNPKTIMRTMSVSQRQMVEIAKAVSYNAKLIVLDEPTSSLTEREVKKLFSIIRAL 187
Query: 179 KEEGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTV--EELKEI-------SKEERLE 229
+++G S ++ +H + +CD V ++ G++I V + EI S ++R
Sbjct: 188 QKKGVSFIYISHKMDEVFEVCDEVAVLRDGKMILSKPVAGTNMNEIISAMVGRSLDKRFP 247
Query: 230 DV-------FLKLTQAKEEIAQVV 246
DV FLK+ K + A V+
Sbjct: 248 DVDNVPGEDFLKIENLKTKYAPVL 271
>pir||T14805 hypothetical protein F15J5.20 - Arabidopsis thaliana
>gi|5816991|emb|CAB53646.1| (AL110123) multidrug
resistance protein/P-glycoprotein-like [Arabidopsis
thaliana]
Length = 1222
Score = 89.3 bits (218), Expect = 4e-17
Identities = 60/241 (24%), Positives = 125/241 (50%), Gaps = 23/241 (9%)
Query: 15 EVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIVGGVEVAKDPLQ-VK 73
++ G S V +G+ L+G +GSGKST + ++ G+V++ +++ K L+ ++
Sbjct: 371 QIFAGFSLFVPNGKTVALVGQSGSGKSTVISLIERFYDPESGQVLIDNIDLKKLQLKWIR 430
Query: 74 RIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAFEIKKYMNQLI--- 130
+G V + P L+ + T E ++ +D ++ +R +E K++++L
Sbjct: 431 SKIGLVSQEPVLFAT-TIKENIAYG------KEDATDQEIRTAIELANAAKFIDKLPQGL 483
Query: 131 -------GT-LSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKEEG 182
GT +S G KQ++++ ++L +PK+L+LDEA + LD +S RI ++ L
Sbjct: 484 DTMVGEHGTQMSGGQKQRLAIARAILKNPKILLLDEATSALDAESERIVQDALVNLMSNR 543
Query: 183 KSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKEERLEDVFLKLTQAKEEI 242
++V + + + D + +++QG+I+ +GT +E+ I E ++L + +E
Sbjct: 544 TTVVVAHRLTTIR--TADVIAVVHQGKIVEKGTHDEM--IQDPEGAYSQLVRLQEGSKEE 599
Query: 243 A 243
A
Sbjct: 600 A 600
Score = 71.4 bits (172), Expect = 1e-11
Identities = 47/174 (27%), Positives = 89/174 (51%), Gaps = 20/174 (11%)
Query: 15 EVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIVGGVEVAKDPLQ-VK 73
++ + + T+ G+ L+G +GSGKST + ++ GK+++ VE+ L ++
Sbjct: 1051 QIFRDLCLTIPSGKTVALVGESGSGKSTVISMIERFYNPDSGKILIDQVEIQTFKLSWLR 1110
Query: 74 RIVGYVPETPALY-ESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAFEIKKYMNQL--- 129
+ +G V + P L+ E++ + GG EE + +A +++ L
Sbjct: 1111 QQMGLVSQEPILFNETIRSNIAYGKTGGAT-------EEEIIAAAKAANAHNFISSLPQG 1163
Query: 130 ----IGT----LSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELL 175
+G LS G KQ+I++ ++L DPK+L+LDEA + LD +S R+ ++ L
Sbjct: 1164 YDTSVGERGVQLSGGQKQRIAIARAILKDPKILLLDEATSALDAESERVVQDAL 1217
>emb|CAB78807.1| (AL161547) multidrug resistance protein/P-glycoprotein-like
[Arabidopsis thaliana]
Length = 1323
Score = 89.3 bits (218), Expect = 4e-17
Identities = 60/241 (24%), Positives = 125/241 (50%), Gaps = 23/241 (9%)
Query: 15 EVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIVGGVEVAKDPLQ-VK 73
++ G S V +G+ L+G +GSGKST + ++ G+V++ +++ K L+ ++
Sbjct: 371 QIFAGFSLFVPNGKTVALVGQSGSGKSTVISLIERFYDPESGQVLIDNIDLKKLQLKWIR 430
Query: 74 RIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAFEIKKYMNQLI--- 130
+G V + P L+ + T E ++ +D ++ +R +E K++++L
Sbjct: 431 SKIGLVSQEPVLFAT-TIKENIAYG------KEDATDQEIRTAIELANAAKFIDKLPQGL 483
Query: 131 -------GT-LSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKEEG 182
GT +S G KQ++++ ++L +PK+L+LDEA + LD +S RI ++ L
Sbjct: 484 DTMVGEHGTQMSGGQKQRLAIARAILKNPKILLLDEATSALDAESERIVQDALVNLMSNR 543
Query: 183 KSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKEERLEDVFLKLTQAKEEI 242
++V + + + D + +++QG+I+ +GT +E+ I E ++L + +E
Sbjct: 544 TTVVVAHRLTTIR--TADVIAVVHQGKIVEKGTHDEM--IQDPEGAYSQLVRLQEGSKEE 599
Query: 243 A 243
A
Sbjct: 600 A 600
Score = 76.9 bits (186), Expect = 2e-13
Identities = 55/220 (25%), Positives = 106/220 (48%), Gaps = 22/220 (10%)
Query: 15 EVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIVGGVEVAKDPLQ-VK 73
++ + + T+ G+ L+G +GSGKST + ++ GK+++ VE+ L ++
Sbjct: 1051 QIFRDLCLTIPSGKTVALVGESGSGKSTVISMIERFYNPDSGKILIDQVEIQTFKLSWLR 1110
Query: 74 RIVGYVPETPALY-ESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAFEIKKYMNQL--- 129
+ +G V + P L+ E++ + GG EE + +A +++ L
Sbjct: 1111 QQMGLVSQEPILFNETIRSNIAYGKTGGAT-------EEEIIAAAKAANAHNFISSLPQG 1163
Query: 130 ----IGT----LSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKEE 181
+G LS G KQ+I++ ++L DPK+L+LDEA + LD +S R+ ++ L
Sbjct: 1164 YDTSVGERGVQLSGGQKQRIAIARAILKDPKILLLDEATSALDAESERVVQDALDRVMVN 1223
Query: 182 GKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKE 221
++V + + + D + ++ G I +G E L E
Sbjct: 1224 RTTVVVAHRLTTIKN--ADVIAVVKNGVIAEKGRHETLDE 1261
>pir||B72424 oligopeptide ABC transporter, ATP-binding protein - Thermotoga
maritima (strain MSB8)
>gi|4980543|gb|AAD35151.1|AE001692_8 (AE001692)
oligopeptide ABC transporter, ATP-binding protein
[Thermotoga maritima]
Length = 338
Score = 88.5 bits (216), Expect = 7e-17
Identities = 71/252 (28%), Positives = 126/252 (49%), Gaps = 17/252 (6%)
Query: 8 RKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVI-------V 60
+K G + +SF +K GE L+G +G GK+TT + + I +G VI V
Sbjct: 21 KKVVGYVRAVDDVSFDIKQGETLALVGESGCGKTTTAKSILRAIDPTDGDVILHLDGKDV 80
Query: 61 GGVEVAKDPLQ-VKRIVGYVPETPALYESLTPAEFFSFVGG----VRGIPKDI-LEERVR 114
++++D L+ +R + + + P Y SL P + G V GI K LE+RV
Sbjct: 81 NIAKLSRDELKPYRRYMQMIFQNP--YTSLNPRMKVKEIVGEPLLVNGIAKGKELEDRVA 138
Query: 115 KLVEAFEIK-KYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRE 173
+L++A ++ +YM + S G +Q+I + ++ PK+++ DE + LD
Sbjct: 139 ELLKAVGLRPEYMIRYPHAFSGGQRQRIVIARAIALRPKLVVCDEPTSALDVSIRAQILN 198
Query: 174 LLYEFKEE-GKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKEERLEDVF 232
LL + +EE + +F TH L++ E I DRV ++Y G+I+ + EE+ E K E +
Sbjct: 199 LLMDLQEEFALTYLFITHDLSVVEHISDRVAVMYLGKIVELSSTEEIFENPKHPYTETLL 258
Query: 233 LKLTQAKEEIAQ 244
+ + ++ +
Sbjct: 259 RSVPKPDPDLRE 270
>pir||H69858 cation ABC transporter (ATP-binding protein) homolog ykoD -
Bacillus subtilis >gi|2632042|emb|CAA05601.1| (AJ002571)
YkoD [Bacillus subtilis] >gi|2633676|emb|CAB13179.1|
(Z99110) similar to cation ABC transporter (ATP-binding
protein) [Bacillus subtilis]
Length = 490
Score = 87.4 bits (213), Expect = 1e-16
Identities = 51/197 (25%), Positives = 108/197 (53%), Gaps = 4/197 (2%)
Query: 4 VENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIVGGV 63
V +L G + + K ISF++++G + L+GPNG+GKST + +L+ ++ GK+++
Sbjct: 297 VSSLSFARGQQAIFKDISFSLREGSLTALVGPNGTGKSTLLSVLASLMKPQSGKILLYDQ 356
Query: 64 EVAK-DPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAFEI 122
+ K ++++ +G+V + P ++ +T + + G + + E++ + L++ F +
Sbjct: 357 PLQKYKEKELRKRMGFVFQNPE-HQFVTDTVYDELLFGQKANAET--EKKAQHLLQRFGL 413
Query: 123 KKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKEEG 182
+ +S G K+++S+ + L+HD KVL+LDE G D ++A E++ K EG
Sbjct: 414 AHLADHHPFAISQGQKRRLSVATMLMHDVKVLLLDEPTFGQDARTAAECMEMIQRIKAEG 473
Query: 183 KSIVFSTHVLALAELIC 199
+++ T + +C
Sbjct: 474 TAVLMITQGYGASLFVC 490
Score = 79.6 bits (193), Expect = 3e-14
Identities = 71/252 (28%), Positives = 124/252 (49%), Gaps = 12/252 (4%)
Query: 14 KEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIVGGVEVAKDPLQ-- 71
K V + ISF ++ GE LLGP+G GKS+ L+G+ + + G V + + P+
Sbjct: 22 KPVFQDISFELQKGECVLLLGPSGCGKSSLALCLNGLYPEACDGIQSGHVFLFQKPVTDA 81
Query: 72 -----VKRIVGYVPETP-ALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAFEIKKY 125
+ + G V + P + LT + +F IPK+ + E++ ++ I
Sbjct: 82 ETSETITQHAGVVFQDPDQQFCMLTVEDEIAFGLENLQIPKEEMTEKINAVLGKLRITHL 141
Query: 126 MNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEF-KEEGKS 184
++I TLS G KQK++L L +P+++ILDE + LDP SAR F L+ + +E+G S
Sbjct: 142 KEKMISTLSGGQKQKVALACILAMEPELIILDEPTSLLDPFSAREFVHLMKDLQREKGFS 201
Query: 185 IVFSTHVL-ALAELICDRVGIIYQGRIIAEGTVEELKEISKE--ERLEDVFLKLTQAKEE 241
++ H L A I + + G+ +G + L + E ++L K+ +E+
Sbjct: 202 LLVIEHQLDEWAPWIERTIVLDKSGKKALDGLTKNLFQHEAETLKKLGIAIPKVCHLQEK 261
Query: 242 IAQVVSALKEAL 253
++ + KE L
Sbjct: 262 LSMPFTLSKEML 273
>sp|P23174|MDR3_CRIGR MULTIDRUG RESISTANCE PROTEIN 3 (P-GLYCOPROTEIN 3)
>gi|2119778|pir||I48123 p-glycoprotein isoform III -
Chinese hamster >gi|191169|gb|AAA68885.1| (M60042)
p-glycoprotein isoform III [Cricetulus griseus]
Length = 1281
Score = 86.2 bits (210), Expect = 3e-16
Identities = 67/241 (27%), Positives = 125/241 (51%), Gaps = 19/241 (7%)
Query: 15 EVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIVGGVEVAKDPLQ-VK 73
++LKG++ V+ G+ L+G +G GK+TT+++L + EG + + G ++ ++ ++
Sbjct: 410 KILKGLNLKVQSGQTVALVGNSGCGKTTTLQLLQRLYDPTEGTISIDGQDIRNFNVRYLR 469
Query: 74 RIVGYVPETPALYESLTPAEFFSFVGG---VRGIPKDILE----ERVRKLVEAFEIKKYM 126
I+G V + P L+ S T AE + G + I K + E E + KL + F+ +
Sbjct: 470 EIIGVVSQEPVLF-STTIAENIRYGRGNVTMEEIKKAVKEANAYEFIMKLPQKFD--TLV 526
Query: 127 NQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKEEGKSIV 186
+ LS G KQ+I++ +L+ +PK+L+LDEA + LD +S + L + EG++ +
Sbjct: 527 GERGAQLSGGQKQRIAIARALVRNPKILLLDEATSALDTESEAEVQAAL-DKAREGRTTI 585
Query: 187 FSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKEERLEDVFLKLTQAKEEIAQVV 246
H L+ D + G I+ +G+ EL + E V+ KL + +Q++
Sbjct: 586 VIAHRLSTVR-NADVIAGFEDGVIVEQGSHSELMQ------KEGVYFKLVNMQTSGSQIL 638
Query: 247 S 247
S
Sbjct: 639 S 639
Score = 84.7 bits (206), Expect = 1e-15
Identities = 63/213 (29%), Positives = 114/213 (52%), Gaps = 13/213 (6%)
Query: 16 VLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIVGGVEVAKDPLQVKRI 75
VL+G+S VK G+ L+G +G GKST +++L G V++ G E K +Q R
Sbjct: 1053 VLQGLSLEVKKGQTLALVGSSGCGKSTVVQLLERFYDPMAGTVLLDGQEAKKLNIQWLRA 1112
Query: 76 -VGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEE-----RVRKLVEAFEIKKYMNQL 129
+G V + P L++ + AE ++ R + +D + + +E +KY ++
Sbjct: 1113 QLGIVSQEPVLFDC-SIAENIAYGDNSRVVSQDEIVRAAKAANIHPFIETLP-QKYKTRV 1170
Query: 130 --IGT-LSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKEEGKSIV 186
GT LS G KQ++++ +L+ P+VL+LDEA + LD +S ++ +E L + EG++ +
Sbjct: 1171 GDKGTQLSGGQKQRLAIRRALIRQPRVLLLDEATSALDTESEKVVQEAL-DKAREGRTCI 1229
Query: 187 FSTHVLALAELICDRVGIIYQGRIIAEGTVEEL 219
H L+ + D + +I G++ GT ++L
Sbjct: 1230 VIAHRLSTIQ-NADLIVVIQNGKVKEHGTHQQL 1261
>gi|6981354 P-glycoprotein 3/ multidrug resistance 2 [Rattus norvegicus]
>gi|1170903|sp|Q08201|MDR2_RAT MULTIDRUG RESISTANCE
PROTEIN 2 (P-GLYCOPROTEIN 2) >gi|543425|pir||S41646
p-glycoprotein - rat >gi|310193|gb|AAA02937.1| (L15079)
P-glycoprotein [Rattus norvegicus]
Length = 1278
Score = 85.0 bits (207), Expect = 8e-16
Identities = 64/213 (30%), Positives = 115/213 (53%), Gaps = 13/213 (6%)
Query: 16 VLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIVGGVEVAKDPLQVKRI 75
VL+G+S VK G+ L+G +G GKST +++L G V++ G E K +Q R
Sbjct: 1050 VLQGLSLEVKKGQTLALVGSSGCGKSTVVQLLERFYDPMAGTVLLDGQEAKKLNVQWLRA 1109
Query: 76 -VGYVPETPALYESLTPAEFFSFVGGVRGIPKDIL-----EERVRKLVEAFEIKKYMNQL 129
+G V + P L++ + A+ ++ R + +D + E + +E +KY ++
Sbjct: 1110 QLGIVSQEPILFDC-SIAKNIAYGDNSRVVSQDEIVRAAKEANIHPFIETLP-QKYETRV 1167
Query: 130 --IGT-LSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKEEGKSIV 186
GT LS G KQ+I++ +L+ P+VL+LDEA + LD +S ++ +E L + EG++ +
Sbjct: 1168 GDKGTQLSGGQKQRIAIARALIRQPRVLLLDEATSALDTESEKVVQEAL-DKAREGRTCI 1226
Query: 187 FSTHVLALAELICDRVGIIYQGRIIAEGTVEEL 219
H L+ + D + +I G++ GT ++L
Sbjct: 1227 VIAHRLSTIQ-NADLIVVIDNGKVKEHGTHQQL 1258
Score = 83.9 bits (204), Expect = 2e-15
Identities = 66/242 (27%), Positives = 128/242 (52%), Gaps = 21/242 (8%)
Query: 15 EVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIVGGVEVAKDPLQ-VK 73
++LKG++ VK G+ L+G +G GKSTT+++L + EG + + G ++ ++ ++
Sbjct: 407 KILKGLNLKVKSGQTVALVGNSGCGKSTTVQLLQRLYDPTEGTISIDGQDIRNFNVRCLR 466
Query: 74 RIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAFE----IKKYMNQL 129
+G V + P L+ S T AE + G + D +++ V++ A++ + + + L
Sbjct: 467 EFIGVVSQEPVLF-STTIAENIRY--GRGNVTMDEIKKAVKE-ANAYDFIMKLPQKFDTL 522
Query: 130 IG----TLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKEEGKSI 185
+G LS G KQ+I++ +L+ +PK+L+LDEA + LD +S + L + EG++
Sbjct: 523 VGDRGAQLSGGQKQRIAIARALVRNPKILLLDEATSALDTESEAEVQAAL-DKAREGRTT 581
Query: 186 VFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKEERLEDVFLKLTQAKEEIAQV 245
+ H L+ D + G I+ +G+ EL I K E ++ +L + +Q+
Sbjct: 582 IVIAHRLSTVR-NADVIAGFEDGVIVEQGSHSEL--IKK----EGIYFRLVNMQTSGSQI 634
Query: 246 VS 247
+S
Sbjct: 635 LS 636
>gi|4505771 ATP-binding cassette, subfamily B, member 4, isoform A;
P-glycoprotein-3/multiple drug resistance-3; P
glycoprotein 3/multiple drug resistance 3; multiple drug
resistance 3 [Homo sapiens]
>gi|126932|sp|P21439|MDR3_HUMAN MULTIDRUG RESISTANCE
PROTEIN 3 (P-GLYCOPROTEIN 3) >gi|72473|pir||DVHU3
multidrug resistance protein 3 - human
>gi|307181|gb|AAA36207.1| (M23234) P-glycoprotein [Homo
sapiens]
Length = 1279
Score = 84.3 bits (205), Expect = 1e-15
Identities = 66/242 (27%), Positives = 126/242 (51%), Gaps = 21/242 (8%)
Query: 15 EVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIVGGVEVAKDPLQ-VK 73
++LKG++ V+ G+ L+G +G GKSTT++++ + EG + + G ++ + ++
Sbjct: 410 KILKGLNLKVQSGQTVALVGSSGCGKSTTVQLIQRLYDPDEGTINIDGQDIRNFNVNYLR 469
Query: 74 RIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAFE----IKKYMNQL 129
I+G V + P L+ S T AE + G + D +++ V++ A+E + + + L
Sbjct: 470 EIIGVVSQEPVLF-STTIAENICY--GRGNVTMDEIKKAVKE-ANAYEFIMKLPQKFDTL 525
Query: 130 IG----TLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKEEGKSI 185
+G LS G KQ+I++ +L+ +PK+L+LDEA + LD +S + L + EG++
Sbjct: 526 VGERGAQLSGGQKQRIAIARALVRNPKILLLDEATSALDTESEAEVQAAL-DKAREGRTT 584
Query: 186 VFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKEERLEDVFLKLTQAKEEIAQV 245
+ H L+ D + G I+ +G+ EL + E V+ KL + +Q+
Sbjct: 585 IVIAHRLSTVR-NADVIAGFEDGVIVEQGSHSELM------KKEGVYFKLVNMQTSGSQI 637
Query: 246 VS 247
S
Sbjct: 638 QS 639
Score = 83.1 bits (202), Expect = 3e-15
Identities = 63/213 (29%), Positives = 112/213 (52%), Gaps = 13/213 (6%)
Query: 16 VLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIVGGVEVAKDPLQVKRI 75
VL+G+S VK G+ L+G +G GKST +++L G V++ G E K +Q R
Sbjct: 1051 VLQGLSLEVKKGQTLALVGSSGCGKSTVVQLLERFYDPLAGTVLLDGQEAKKLNVQWLRA 1110
Query: 76 -VGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEE-----RVRKLVEAFEIKKYMNQL 129
+G V + P L++ + AE ++ R + +D + + +E KY ++
Sbjct: 1111 QLGIVSQEPILFDC-SIAENIAYGDNSRVVSQDEIVSAAKAANIHPFIETLP-HKYETRV 1168
Query: 130 --IGT-LSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKEEGKSIV 186
GT LS G KQ+I++ +L+ P++L+LDEA + LD +S ++ +E L + EG++ +
Sbjct: 1169 GDKGTQLSGGQKQRIAIARALIRQPQILLLDEATSALDTESEKVVQEAL-DKAREGRTCI 1227
Query: 187 FSTHVLALAELICDRVGIIYQGRIIAEGTVEEL 219
H L+ + D + + GR+ GT ++L
Sbjct: 1228 VIAHRLSTIQ-NADLIVVFQNGRVKEHGTHQQL 1259
>gi|9961250 ATP-binding cassette, subfamily B, member 4, isoform A;
P-glycoprotein-3/multiple drug resistance-3; P
glycoprotein 3/multiple drug resistance 3; multiple drug
resistance 3 [Homo sapiens]
Length = 1286
Score = 84.3 bits (205), Expect = 1e-15
Identities = 66/242 (27%), Positives = 126/242 (51%), Gaps = 21/242 (8%)
Query: 15 EVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIVGGVEVAKDPLQ-VK 73
++LKG++ V+ G+ L+G +G GKSTT++++ + EG + + G ++ + ++
Sbjct: 410 KILKGLNLKVQSGQTVALVGSSGCGKSTTVQLIQRLYDPDEGTINIDGQDIRNFNVNYLR 469
Query: 74 RIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAFE----IKKYMNQL 129
I+G V + P L+ S T AE + G + D +++ V++ A+E + + + L
Sbjct: 470 EIIGVVSQEPVLF-STTIAENICY--GRGNVTMDEIKKAVKE-ANAYEFIMKLPQKFDTL 525
Query: 130 IG----TLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKEEGKSI 185
+G LS G KQ+I++ +L+ +PK+L+LDEA + LD +S + L + EG++
Sbjct: 526 VGERGAQLSGGQKQRIAIARALVRNPKILLLDEATSALDTESEAEVQAAL-DKAREGRTT 584
Query: 186 VFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKEERLEDVFLKLTQAKEEIAQV 245
+ H L+ D + G I+ +G+ EL + E V+ KL + +Q+
Sbjct: 585 IVIAHRLSTVR-NADVIAGFEDGVIVEQGSHSELM------KKEGVYFKLVNMQTSGSQI 637
Query: 246 VS 247
S
Sbjct: 638 QS 639
Score = 76.5 bits (185), Expect = 3e-13
Identities = 64/220 (29%), Positives = 111/220 (50%), Gaps = 20/220 (9%)
Query: 16 VLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIVG-------GVEVAKD 68
VL+G+S VK G+ L+G +G GKST +++L G V V G E K
Sbjct: 1051 VLQGLSLEVKKGQTLALVGSSGCGKSTVVQLLERFYDPLAGTVFVDFGFQLLDGQEAKKL 1110
Query: 69 PLQVKRI-VGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEE-----RVRKLVEAFEI 122
+Q R +G V + P L++ + AE ++ R + +D + + +E
Sbjct: 1111 NVQWLRAQLGIVSQEPILFDC-SIAENIAYGDNSRVVSQDEIVSAAKAANIHPFIETLP- 1168
Query: 123 KKYMNQL--IGT-LSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFK 179
KY ++ GT LS G KQ+I++ +L+ P++L+LDEA + LD +S ++ +E L +
Sbjct: 1169 HKYETRVGDKGTQLSGGQKQRIAIARALIRQPQILLLDEATSALDTESEKVVQEAL-DKA 1227
Query: 180 EEGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEEL 219
EG++ + H L+ + D + + GR+ GT ++L
Sbjct: 1228 REGRTCIVIAHRLSTIQ-NADLIVVFQNGRVKEHGTHQQL 1266
>gi|9961252 ATP-binding cassette, subfamily B, member 4, isoform A;
P-glycoprotein-3/multiple drug resistance-3; P
glycoprotein 3/multiple drug resistance 3; multiple drug
resistance 3 [Homo sapiens]
Length = 1232
Score = 84.3 bits (205), Expect = 1e-15
Identities = 66/242 (27%), Positives = 126/242 (51%), Gaps = 21/242 (8%)
Query: 15 EVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIVGGVEVAKDPLQ-VK 73
++LKG++ V+ G+ L+G +G GKSTT++++ + EG + + G ++ + ++
Sbjct: 410 KILKGLNLKVQSGQTVALVGSSGCGKSTTVQLIQRLYDPDEGTINIDGQDIRNFNVNYLR 469
Query: 74 RIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAFE----IKKYMNQL 129
I+G V + P L+ S T AE + G + D +++ V++ A+E + + + L
Sbjct: 470 EIIGVVSQEPVLF-STTIAENICY--GRGNVTMDEIKKAVKE-ANAYEFIMKLPQKFDTL 525
Query: 130 IG----TLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKEEGKSI 185
+G LS G KQ+I++ +L+ +PK+L+LDEA + LD +S + L + EG++
Sbjct: 526 VGERGAQLSGGQKQRIAIARALVRNPKILLLDEATSALDTESEAEVQAAL-DKAREGRTT 584
Query: 186 VFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKEERLEDVFLKLTQAKEEIAQV 245
+ H L+ D + G I+ +G+ EL + E V+ KL + +Q+
Sbjct: 585 IVIAHRLSTVR-NADVIAGFEDGVIVEQGSHSELM------KKEGVYFKLVNMQTSGSQI 637
Query: 246 VS 247
S
Sbjct: 638 QS 639
Score = 83.1 bits (202), Expect = 3e-15
Identities = 63/213 (29%), Positives = 112/213 (52%), Gaps = 13/213 (6%)
Query: 16 VLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIVGGVEVAKDPLQVKRI 75
VL+G+S VK G+ L+G +G GKST +++L G V++ G E K +Q R
Sbjct: 1004 VLQGLSLEVKKGQTLALVGSSGCGKSTVVQLLERFYDPLAGTVLLDGQEAKKLNVQWLRA 1063
Query: 76 -VGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEE-----RVRKLVEAFEIKKYMNQL 129
+G V + P L++ + AE ++ R + +D + + +E KY ++
Sbjct: 1064 QLGIVSQEPILFDC-SIAENIAYGDNSRVVSQDEIVSAAKAANIHPFIETLP-HKYETRV 1121
Query: 130 --IGT-LSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKEEGKSIV 186
GT LS G KQ+I++ +L+ P++L+LDEA + LD +S ++ +E L + EG++ +
Sbjct: 1122 GDKGTQLSGGQKQRIAIARALIRQPQILLLDEATSALDTESEKVVQEAL-DKAREGRTCI 1180
Query: 187 FSTHVLALAELICDRVGIIYQGRIIAEGTVEEL 219
H L+ + D + + GR+ GT ++L
Sbjct: 1181 VIAHRLSTIQ-NADLIVVFQNGRVKEHGTHQQL 1212
>emb|CAA75922.1| (Y15990) P-glycoprotein-like protein [Arabidopsis thaliana]
Length = 1229
Score = 83.9 bits (204), Expect = 2e-15
Identities = 62/247 (25%), Positives = 124/247 (50%), Gaps = 23/247 (9%)
Query: 14 KEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIVGGVEVAKDPLQ-V 72
+EV G S + G L+G +GSGKS+ + ++ G V++ GV + + L+ +
Sbjct: 363 EEVFGGFSLLIPSGATAALVGESGSGKSSVISLIERFYDPSSGSVLIDGVNLKEFQLKWI 422
Query: 73 KRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVR---KLVEAF----EIKKY 125
+ +G V + P L+ S S + + ++ E ++ KL A ++ +
Sbjct: 423 RGKIGLVSQEPVLFSS-------SIMENIGYGKENATVEEIQAAAKLANAANFIDKLPRG 475
Query: 126 MNQLIGT----LSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKEE 181
+ L+G LS G KQ+I++ ++L DP++L+LDEA + LD +S R+ +E L
Sbjct: 476 LETLVGEHGTQLSGGQKQRIAIARAILKDPRILLLDEATSALDAESERVVQEALDRVMMS 535
Query: 182 GKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKEERLEDVFLKLTQAKEE 241
+++ + + + D + +I++G+I+ EG+ EL + E ++L + K+E
Sbjct: 536 RTTVIVAHRLSTVRN--ADMIAVIHRGKIVEEGSHSEL--LKDHEGAYAQLIRLQKIKKE 591
Query: 242 IAQVVSA 248
++ S+
Sbjct: 592 PKRLESS 598
Score = 78.8 bits (191), Expect = 6e-14
Identities = 53/215 (24%), Positives = 106/215 (48%), Gaps = 9/215 (4%)
Query: 15 EVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIVGGVEVAKDPLQ-VK 73
++ + + F ++ G+ L+G +GSGKST + +L G + + VE+ K L+ V+
Sbjct: 1000 QIFRDLCFAIRAGQTVALVGESGSGKSTVISLLQRFYDPDSGHITLDRVELKKLQLKWVR 1059
Query: 74 RIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAF--EIKKYMNQLIG 131
+ +G V + P L+ + GG +I+ F I++ + ++G
Sbjct: 1060 QQMGLVGQEPVLFNDTIRSNIAYGKGGDEASEAEIIAAAELANAHGFISSIQQGYDTVVG 1119
Query: 132 T----LSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKEEGKSIVF 187
LS G KQ++++ +++ +PK+L+LDEA + LD +S R+ ++ L ++V
Sbjct: 1120 ERGIQLSGGQKQRVAIARAIVKEPKILLLDEATSALDAESERVVQDALDRVMVNRTTVVV 1179
Query: 188 STHVLALAELICDRVGIIYQGRIIAEGTVEELKEI 222
+ + + D + ++ G I+ +GT E L I
Sbjct: 1180 AHRLSTIKN--ADVIAVVKNGVIVEKGTHETLINI 1212
>gb|AAD22644.1|AC007138_8 (AC007138) P-glycoprotein-like protein [Arabidopsis thaliana]
>gi|7268566|emb|CAB80675.1| (AL161493)
P-glycoprotein-like protein pgp3 [Arabidopsis thaliana]
Length = 1229
Score = 83.9 bits (204), Expect = 2e-15
Identities = 62/247 (25%), Positives = 124/247 (50%), Gaps = 23/247 (9%)
Query: 14 KEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIVGGVEVAKDPLQ-V 72
+EV G S + G L+G +GSGKS+ + ++ G V++ GV + + L+ +
Sbjct: 363 EEVFGGFSLLIPSGATAALVGESGSGKSSVISLIERFYDPSSGSVLIDGVNLKEFQLKWI 422
Query: 73 KRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVR---KLVEAF----EIKKY 125
+ +G V + P L+ S S + + ++ E ++ KL A ++ +
Sbjct: 423 RGKIGLVSQEPVLFSS-------SIMENIGYGKENATVEEIQAAAKLANAANFIDKLPRG 475
Query: 126 MNQLIGT----LSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKEE 181
+ L+G LS G KQ+I++ ++L DP++L+LDEA + LD +S R+ +E L
Sbjct: 476 LETLVGEHGTQLSGGQKQRIAIARAILKDPRILLLDEATSALDAESERVVQEALDRVMMS 535
Query: 182 GKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKEERLEDVFLKLTQAKEE 241
+++ + + + D + +I++G+I+ EG+ EL + E ++L + K+E
Sbjct: 536 RTTVIVAHRLSTVRN--ADMIAVIHRGKIVEEGSHSEL--LKDHEGAYAQLIRLQKIKKE 591
Query: 242 IAQVVSA 248
++ S+
Sbjct: 592 PKRLESS 598
Score = 78.8 bits (191), Expect = 6e-14
Identities = 53/215 (24%), Positives = 106/215 (48%), Gaps = 9/215 (4%)
Query: 15 EVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIVGGVEVAKDPLQ-VK 73
++ + + F ++ G+ L+G +GSGKST + +L G + + VE+ K L+ V+
Sbjct: 1000 QIFRDLCFAIRAGQTVALVGESGSGKSTVISLLQRFYDPDSGHITLDRVELKKLQLKWVR 1059
Query: 74 RIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAF--EIKKYMNQLIG 131
+ +G V + P L+ + GG +I+ F I++ + ++G
Sbjct: 1060 QQMGLVGQEPVLFNDTIRSNIAYGKGGDEASEAEIIAAAELANAHGFISSIQQGYDTVVG 1119
Query: 132 T----LSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKEEGKSIVF 187
LS G KQ++++ +++ +PK+L+LDEA + LD +S R+ ++ L ++V
Sbjct: 1120 ERGIQLSGGQKQRVAIARAIVKEPKILLLDEATSALDAESERVVQDALDRVMVNRTTVVV 1179
Query: 188 STHVLALAELICDRVGIIYQGRIIAEGTVEELKEI 222
+ + + D + ++ G I+ +GT E L I
Sbjct: 1180 AHRLSTIKN--ADVIAVVKNGVIVEKGTHETLINI 1212
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.319 0.141 0.380
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 88526407
Number of Sequences: 2977
Number of extensions: 3759145
Number of successful extensions: 21231
Number of sequences better than 1.0e-10: 1928
Number of HSP's better than 0.0 without gapping: 234
Number of HSP's successfully gapped in prelim test: 1695
Number of HSP's that attempted gapping in prelim test: 17883
Number of HSP's gapped (non-prelim): 2388
length of query: 253
length of database: 189,106,746
effective HSP length: 58
effective length of query: 195
effective length of database: 154,394,500
effective search space: 30106927500
effective search space used: 30106927500
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 164 (68.3 bits)