BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB1703 (drrA-like) DE:DAUNORUBICIN RESISTANCE ATP-BINDING
PROTEIN DRRA
(314 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||B75076 daunorubicin resistance ATP-binding protein drra PAB... 623 e-178
pir||E75108 daunorubicin resistance ATP-binding protein (drra-1)... 190 2e-47
gb|AAC44357.1| (U43537) ATP-binding protein involved in mithramy... 182 5e-45
gb|AAD44229.1|AF143772_35 (AF143772) DrrA [Mycobacterium avium] 182 6e-45
pir||C71081 probable resistance ATP-binding protein - Pyrococcus... 182 6e-45
pir||D72492 probable ABC transporter ATP-binding protein APE2579... 181 1e-44
gb|AAD20382.1| (AF125999) daunorubicin resistance protein A [Myc... 180 2e-44
pir||S76278 ABC-type transport protein sll0759 - Synechocystis s... 180 2e-44
pir||D72257 hypothetical protein TM1403 - Thermotoga maritima (s... 179 4e-44
pir||D70984 probable drrA protein - Mycobacterium tuberculosis (... 175 8e-43
pir||C69049 ABC transporter (ATP-binding protein) - Methanobacte... 174 1e-42
dbj|BAB06933.1| (AP001518) ABC transporter (ATP-binding protein)... 173 2e-42
pir||S73019 daunorubicin resistance protein drrA - Mycobacterium... 171 7e-42
gi|11499468 daunorubicin resistance ATP-binding protein (drrA) [... 170 2e-41
pir||S74048 probable daunorubicin resistance protein - Sulfolobu... 170 2e-41
gb|AAK42315.1| ABC transporter, ATP binding protein. [Sulfolobus... 170 2e-41
emb|CAB94554.1| (AL359152) putative ABC transporter, ATP-binding... 167 2e-40
pir||H71008 probable ATP-binding transport protein - Pyrococcus ... 166 2e-40
emb|CAC11370.1| (AL445063) gliding motility protein related [The... 166 3e-40
dbj|BAB05817.1| (AP001514) ABC transporter (ATP-binding protein)... 166 3e-40
pir||E75122 hypothetical protein PAB1845 - Pyrococcus abyssi (st... 165 5e-40
sp|P32010|DRRA_STRPE DAUNORUBICIN RESISTANCE ATP-BINDING PROTEIN... 164 2e-39
pir||B64816 ABC-type transport protein ybhF - Escherichia coli >... 162 5e-39
sp|P75776|YBHF_ECOLI HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 162 5e-39
pir||C71197 probable ATP-binding transport protein - Pyrococcus ... 161 8e-39
pir||B69065 ABC transporter (ATP-binding, daunorubicin resistanc... 161 1e-38
pir||T36505 probable ABC-type transport system ATP-binding compo... 161 1e-38
pir||T50566 probable ABC-type transport protein, ATP-binding com... 160 2e-38
gb|AAK42768.1| ABC transporter, ATP binding protein [Sulfolobus ... 160 2e-38
pir||G69803 ABC transporter (ATP-binding protein) homolog yfiL -... 160 2e-38
emb|CAC11998.1| (AL445065) ABC transporter related protein [Ther... 159 3e-38
pir||T44443 gliding motility protein [imported] - Flavobacterium... 159 5e-38
pir||S32908 hypothetical protein 4 - Streptomyces antibioticus >... 157 1e-37
dbj|BAB04773.1| (AP001510) transposase (08)/ABC transporter (ATP... 157 2e-37
dbj|BAA83955.1| (AB024563) YFIL [Bacillus halodurans] 157 2e-37
pir||T00826 hypothetical protein T32G6.22 - Arabidopsis thaliana... 157 2e-37
gb|AAC02761.2| (AC002339) putative ABC transporter [Arabidopsis ... 157 2e-37
gb|AAG32068.1|AF317790_1 (AF317790) ATP-binding transporter AviA... 157 2e-37
emb|CAA75761.1| (Y15759) ORF1 [Streptomyces rochei] 156 3e-37
pir||C72568 probable ATP-binding transport protein APE1829 - Aer... 156 3e-37
pir||T18288 ABC transport protein - slime mold (Dictyostelium di... 156 3e-37
pir||A75184 ATP-binding transport protein PAB0434 - Pyrococcus a... 156 3e-37
pir||T35090 probable ABC transport ATP-binding subunit - Strepto... 155 5e-37
pir||G71131 probable ATP-binding protein - Pyrococcus horikoshii... 155 5e-37
pir||H75157 daunorubicin resistance ATP-binding protein (drra-2)... 155 8e-37
pir||B71030 probable ATP-binding transport protein - Pyrococcus ... 154 1e-36
pir||C69012 ABC transporter (ATP-binding, daunorubicin resistanc... 154 1e-36
pir||D72484 probable ATP-binding protein APE2516 - Aeropyrum per... 154 1e-36
gb|AAK43268.1| ABC transporter, ATP binding protein related prot... 153 2e-36
pir||A70194 ABC transporter, ATP-binding protein homolog - Lyme ... 153 3e-36
gb|AAK41395.1| ABC transporter, ATP binding protein [Sulfolobus ... 153 3e-36
pir||T36344 probable ABC-type transport system ATP-binding prote... 152 7e-36
gi|11498898 ABC transporter, ATP-binding protein [Archaeoglobus ... 152 7e-36
sp|P54592|YHCH_BACSU HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 150 2e-35
gb|AAK42130.1| Antibiotic ABC transporter ATP binding protein [S... 150 2e-35
gi|11498736 ABC transporter, ATP-binding protein [Archaeoglobus ... 150 2e-35
pir||E72364 ABC transporter, ATP-binding protein - Thermotoga ma... 150 3e-35
sp|P72335|NODI_RHIS3 NODULATION ATP-BINDING PROTEIN I >gi|153162... 149 4e-35
emb|CAB76006.1| (AL157916) putative ABC transporter, ATP-binding... 148 6e-35
pir||E75564 ABC transporter, ATP-binding protein - Deinococcus r... 148 1e-34
sp|P23703|NODI_RHILO NODULATION ATP-BINDING PROTEIN I >gi|95215|... 147 1e-34
gb|AAF49304.2| (AE003522) NUCB1 gene product [Drosophila melanog... 146 2e-34
gb|AAG35594.1|AF200948_1 (AF200948) ABC1 transporter [Leishmania... 146 2e-34
emb|CAC11868.1| (AL445065) ATP-binding protein related resistanc... 146 2e-34
pir||S76626 ABC-type transport protein sll0489 - Synechocystis s... 146 2e-34
pir||C72303 ABC transporter, ATP-binding protein - Thermotoga ma... 146 2e-34
gb|AAF49305.1| (AE003522) CG5944 gene product [Drosophila melano... 146 2e-34
pir||F82572 sodium ABC transporter ATP-binding protein XF2329 [i... 146 3e-34
sp|P46903|NATA_BACSU ATP-BINDING TRANSPORT PROTEIN NATA (NA+ ABC... 146 4e-34
pir||T36741 probable ABC-type transport system ATP-binding prote... 146 4e-34
gb|AAF99566.1| (AF167161) unknown [Staphylococcus aureus] 146 4e-34
dbj|BAB07698.1| (AP001520) ABC transporter (ATP-binding protein)... 145 7e-34
pir||S72783 probable ABC-type transport protein B1496_F3_97 - My... 145 9e-34
pir||T36000 probable ABC-type transport system ATP-binding chain... 145 9e-34
pir||E70337 ABC transporter - Aquifex aeolicus >gi|2983089|gb|AA... 144 1e-33
pir||A83142 probable ATP-binding component of ABC transporter PA... 144 1e-33
gb|AAG21390.1|AF302051_4 (AF302051) ABC transporter ATP binding ... 144 1e-33
gb|AAA21451.1| (U01058) ABC family transporter [Entamoeba histol... 144 2e-33
pir||E70871 hypothetical protein Rv1458c - Mycobacterium tubercu... 144 2e-33
pir||A59189 ATP-binding cassette transporter - human (fragment) ... 144 2e-33
gb|AAG09372.1|AF178941_1 (AF178941) ATP-binding cassette sub-fam... 144 2e-33
emb|CAC11779.1| (AL445064) daunorubicin resistance protein relat... 143 2e-33
emb|CAC08414.1| (AL392178) putative ABC transport system ATP-bin... 143 3e-33
gb|AAG20087.1| (AE005088) ABC transport protein; Trp2 [Halobacte... 143 3e-33
gi|6671495 ATP-binding cassette, sub-family A, member 4; ATP-bin... 142 4e-33
gi|11498586 osmoprotection protein (proV) [Archaeoglobus fulgidu... 142 6e-33
gb|AAC23915.1| (AF000148) ATP-binding cassette transporter [Homo... 142 6e-33
pir||B72334 ABC transporter, ATP-binding protein - Thermotoga ma... 142 6e-33
pir||E81337 ABC-transporter ATP-binding protein Cj0669 [imported... 142 6e-33
gb|AAK40417.1| ABC transporter, ATP binding protein [Sulfolobus ... 141 8e-33
sp|P08720|NODI_RHILV NODULATION ATP-BINDING PROTEIN I >gi|78028|... 141 8e-33
pir||S75436 hypothetical protein c05019 - Sulfolobus solfataricu... 141 8e-33
pir||C75310 ABC transporter, ATP-binding protein - Deinococcus r... 141 8e-33
gb|AAB17558.1| (U72493) ATP binding protein [Chlamydia trachomatis] 141 1e-32
sp|P55476|NODI_RHISN NODULATION ATP-BINDING PROTEIN I >gi|218242... 141 1e-32
pir||G71486 probable ABC transporter ATPase - Chlamydia trachoma... 141 1e-32
pir||S71363 probable ATP-binding cassette transporter ABC-3 - hu... 141 1e-32
gi|4501849 ATP-binding cassette, sub-family A member 3; ATP-bind... 141 1e-32
gb|AAC05632.1| (AF001945) rim ABC transporter [Homo sapiens] 141 1e-32
emb|CAA75729.1| (Y15635) ABCR [Homo sapiens] 141 1e-32
sp|P78363|ABCR_HUMAN RETINAL-SPECIFIC ATP-BINDING CASSETTE TRANS... 141 1e-32
gb|AAF49312.2| (AE003523) CG6052 gene product [Drosophila melano... 141 1e-32
gi|11421340 ATP-binding cassette, sub-family A member 4 [Homo sa... 141 1e-32
gi|11431125 ATP-binding cassette, sub-family A member 3 [Homo sa... 141 1e-32
sp|P26050|NODI_BRAJA NODULATION ATP-BINDING PROTEIN I >gi|281683... 140 2e-32
prf||1914270A nodulation protein [Bradyrhizobium japonicum] 140 2e-32
dbj|BAB04164.1| (AP001508) ABC transporter (ATP-binding protein)... 140 2e-32
dbj|BAB04537.1| (AP001509) bacitracin ABC transporter (ATP-bindi... 140 2e-32
gb|AAC72253.1| (U91581) LctF [Lactococcus lactis subsp. lactis] 140 2e-32
gb|AAC61484.1| (AF082738) ABC transporter ATP-binding protein [S... 140 2e-32
pir||H75077 abc transporter, ATP-binding protein PAB1696 - Pyroc... 140 2e-32
gb|AAF73520.1| (AE002271) ABC transporter, ATP-binding protein [... 140 2e-32
emb|CAC08315.1| (AL392149) putative ABC transport system ATP-bin... 140 2e-32
gb|AAK41557.1| Antibiotic ABC transporter, ATP binding protein [... 139 3e-32
pir||S60124 transport protein homolog C48B4.4 - Caenorhabditis e... 139 3e-32
pir||T42749 ATP-binding cassette transport protein homolog - Cae... 139 3e-32
pir||C72044 ABC transporter ATPase - Chlamydophila pneumoniae (s... 139 3e-32
pir||T07713 probable ABC-type transport protein T23J7.70 - Arabi... 139 3e-32
sp|P34358|YLH4_CAEEL PUTATIVE ABC TRANSPORTER C48B4.4 IN CHROMOS... 139 3e-32
emb|CAA82383.2| (Z29117) contains similarity to Pfam domain: PF0... 139 3e-32
emb|CAA82384.2| (Z29117) contains similarity to Pfam domain: PF0... 139 3e-32
pir||A70039 ABC transporter (ATP-binding protein) homolog yvfR -... 139 3e-32
gb|AAF50837.1| (AE003568) CG1718 gene product [Drosophila melano... 139 3e-32
pir||T47150 hypothetical protein DKFZp547P193.1 - human (fragmen... 139 3e-32
pir||E72636 probable nodulation ATP-binding protein I APE1548 - ... 139 4e-32
dbj|BAB04009.1| (AP001508) ABC transporter (ATP-binding protein)... 139 4e-32
dbj|BAB16596.1| (AB037937) ABC2 [Rattus norvegicus] 139 5e-32
gi|4557876 ATP-binding cassette, sub-family A member 4; ATP bind... 139 5e-32
pir||C69819 ABC transporter (ATP-binding protein) homolog yhaQ -... 139 5e-32
sp|P42332|BCRA_BACLI BACITRACIN TRANSPORT ATP-BINDING PROTEIN BC... 138 7e-32
gb|AAG20473.1| (AE005119) copper transport ATP-binding protein; ... 138 7e-32
gb|AAC48716.1| (U90126) ABC transporter [Bos taurus] 138 9e-32
pir||C72336 ABC transporter, ATP-binding protein - Thermotoga ma... 138 9e-32
emb|CAB37661.1| (AJ224479) cdd4-like protein [Bacillus sphaericus] 138 1e-31
pir||H72301 ABC transporter, ATP-binding protein - Thermotoga ma... 138 1e-31
pir||E69162 sulfate transport system ATP-binding - Methanobacter... 137 1e-31
pir||T31682 bcrA protein - Bacillus licheniformis >gi|4464278|gb... 137 1e-31
dbj|BAA75396.1| (AB013378) YhaQ [Bacillus halodurans] 137 1e-31
gb|AAF23811.1|AF213822_26 (AF213822) ABC binding protein [Zymomo... 137 1e-31
dbj|BAB04722.1| (AP001510) ABC transporter (ATP-binding protein)... 137 1e-31
gi|6005701 ATP-binding cassette, sub-family A member 8 [Homo sap... 137 2e-31
pir||C72267 ABC transporter, ATP-binding protein - Thermotoga ma... 137 2e-31
gb|AAC62423.1| (AF084104) NatA [Bacillus firmus] 136 3e-31
dbj|BAB04885.1| (AP001511) ABC transporter (ATP-binding protein)... 136 3e-31
pir||H69746 ABC transporter (binding protein) homolog ybdA - Bac... 136 3e-31
pir||T22748 hypothetical protein F55G11.9 - Caenorhabditis elega... 136 3e-31
pir||T07714 probable ABC-type transport protein T23J7.80 - Arabi... 136 3e-31
pir||E72378 sugar ABC transporter, ATP-binding protein - Thermot... 136 3e-31
pir||T07717 probable ABC-type transport protein T23J7.110 - Arab... 136 4e-31
pir||F72742 probable transport ATP-binding protein APE0471 - Aer... 136 4e-31
sp|P36879|YADG_ECOLI HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 135 6e-31
pir||C75593 probable ABC transporter, ATP-binding protein - Dein... 135 6e-31
pir||T27121 hypothetical protein Y53C10A.9 - Caenorhabditis eleg... 135 7e-31
dbj|BAB10070.1| (AB010069) contains similarity to ABC transporte... 135 7e-31
pir||C65111 probable ABC transporter (ntrA/rpoN 5'region) - Esch... 134 1e-30
gb|AAF44814.1|AE003406_19 (AE003416) symbol=BG:DS00797.5; predic... 134 1e-30
gb|AAF53328.1| (AE003641) CG7491 gene product [Drosophila melano... 134 1e-30
gi|11499064 ABC transporter, ATP-binding protein [Archaeoglobus ... 134 1e-30
pir||G64435 cobalt transport ATP-binding protein O homolog - Met... 134 2e-30
pir||E82065 ABC transporter, ATP-binding protein VC2528 [importe... 134 2e-30
pir||A75083 ATP-binding transport protein PAB1668 - Pyrococcus a... 134 2e-30
dbj|BAB07200.1| (AP001518) ABC transporter (ATP-binding protein)... 134 2e-30
pir||F72756 probable multiple sugar-binding transport ATP-bindin... 133 2e-30
pir||G75548 ABC transporter, ATP-binding protein - Deinococcus r... 133 2e-30
gb|AAF81232.1| (AF263012) ABC transporter ATP binding protein [S... 133 2e-30
pir||G83159 probable ATP-binding component of ABC transporter PA... 133 2e-30
sp|P41234|ABC2_MOUSE ATP-BINDING CASSETTE TRANSPORTER 2 >gi|1082... 132 4e-30
gb|AAA62693.1| (M57689) sporulation protein [Bacillus subtilis] ... 132 4e-30
emb|CAA39791.1| (X56347) OppF [Bacillus subtilis] 132 4e-30
gb|AAK41504.1| ABC transporter, ATP binding protein [Sulfolobus ... 132 5e-30
pir||D70020 ABC transporter (ATP-binding protein) homolog yusC -... 132 5e-30
sp|P31220|YHBG_ECOLI PROBABLE ABC TRANSPORTER ATP-BINDING PROTEI... 131 1e-29
pir||A70082 ABC transporter (ATP-binding protein) homolog yxlF -... 131 1e-29
gi|11498623 ABC transporter, ATP-binding protein [Archaeoglobus ... 131 1e-29
pir||E72384 ABC transporter, ATP-binding protein - Thermotoga ma... 131 1e-29
pir||B83294 probable ATP-binding component of ABC transporter PA... 131 1e-29
dbj|BAB10074.1| (AB010069) contains similarity to ABC transporte... 131 1e-29
gb|AAG19180.1| (AE005015) ABC transporter, ATP-binding protein; ... 131 1e-29
sp|P45073|YHBG_HAEIN PROBABLE ABC TRANSPORTER ATP-BINDING PROTEI... 131 1e-29
pir||T09008 cdd4-like protein ScnF - Streptococcus pyogenes >gi|... 131 1e-29
pir||E72314 ribose ABC transporter, ATP-binding protein - Thermo... 131 1e-29
emb|CAB60255.1| (AJ250862) MrsF protein [Bacillus sp. HIL-Y85/54... 131 1e-29
sp|P31134|POTG_ECOLI PUTRESCINE TRANSPORT ATP-BINDING PROTEIN PO... 130 2e-29
pir||H71006 probable ATP-binding transport protein - Pyrococcus ... 130 2e-29
gi|11498611 ABC transporter, ATP-binding protein [Archaeoglobus ... 129 3e-29
sp|P45171|POTA_HAEIN SPERMIDINE/PUTRESCINE TRANSPORT ATP-BINDING... 129 4e-29
pir||H82440 ABC transporter, ATP-binding protein VCA0602 [import... 129 4e-29
gi|11498288 glutamine ABC transporter, ATP-binding protein (glnQ... 129 6e-29
pir||JC5348 cdd4 protein - Clostridium difficile >gi|1770140|emb... 128 7e-29
gb|AAC27495.1| (AF077856) PotA [Actinobacillus actinomycetemcomi... 128 7e-29
gi|9506365 ATP-binding cassette, sub-family A (ABC1), member 7 [... 128 7e-29
gi|11427664 ATP-binding cassette, sub-family A (ABC1), member 7 ... 128 7e-29
pir||E83222 NosF protein PA3394 [imported] - Pseudomonas aerugin... 128 1e-28
pir||S74476 ABC-type transport protein slr1113 - Synechocystis s... 127 1e-28
pir||D83194 polyamine transport protein PotA PA3607 [imported] -... 127 1e-28
emb|CAB53353.1| (AJ010260) NosF protein [Paracoccus denitrificans] 127 2e-28
emb|CAA11111.1| (AJ223088) hypothetical protein [Pseudomonas stu... 127 2e-28
pir||H70610 probable ABC-typetransmembrane transport portein - M... 126 3e-28
pir||G71905 probable ABC transporter, ATP-binding protein - Heli... 126 3e-28
pir||T33783 hypothetical protein Y39D8C.1 - Caenorhabditis elega... 126 4e-28
pir||E75579 branched-chain amino acid ABC tranpsorter, ATP bindi... 126 4e-28
pir||H83240 probable ATP-binding component of ABC transporter PA... 126 4e-28
pir||G72598 probable ABC transporter ATP-binding protein APE1255... 125 5e-28
pir||C72615 probable transport ATP-binding protein APE1380 - Aer... 125 6e-28
pir||F82201 spermidine/putrescine ABC transporter, ATP-binding p... 125 6e-28
pir||C64609 ABC transporter, ATP-binding protein - Helicobacter ... 125 8e-28
pir||C75369 amino acid ABC transporter, ATP-binding protein - De... 124 1e-27
sp|P19844|NOSF_PSEST COPPER TRANSPORT ATP-BINDING PROTEIN NOSF >... 124 1e-27
pir||T36764 probable ABC-type transport system ATP-binding prote... 124 1e-27
sp|P73450|NRTC_SYNY3 NITRATE TRANSPORT ATP-BINDING PROTEIN NRTC ... 123 2e-27
gb|AAC36155.1| (AF003632) PilH [Myxococcus xanthus] 123 2e-27
gi|10955070 agtA [Agrobacterium tumefaciens] >gi|6689864|gb|AAF2... 123 2e-27
pir||E83087 probable ATP-binding component of ABC transporter PA... 123 3e-27
pir||E69771 ABC transporter (ATP-binding protein) homolog ydbJ -... 122 4e-27
gi|10956101 ABC transporter subunit PenL [Pediococcus pentosaceu... 122 4e-27
gb|AAF33771.1|AF219259_4 (AF219259) YhbG [Haemophilus ducreyi] 122 4e-27
pir||F82303 ABC transporter, ATP-binding protein VC0589 [importe... 122 6e-27
dbj|BAB09013.1| (AB012239) contains similarity to ABC transporte... 122 7e-27
pir||G71014 probable dipeptide transport ATP-binding protein dpp... 121 1e-26
pir||G81926 probable polyamine permease ATP-binding protein NMA0... 121 1e-26
dbj|BAB10073.1| (AB010069) contains similarity to ABC transporte... 121 1e-26
dbj|BAA75384.1| (AB013374) MsmX [Bacillus halodurans] 120 2e-26
pir||C81179 spermidine/putrescine ABC transporter, ATP-binding p... 120 2e-26
dbj|BAB04231.1| (AP001508) ABC transporter (ATP-binding protein)... 120 2e-26
pir||G71271 probable ABC transporter natA - syphilis spirochete ... 120 3e-26
pir||H72555 probable transporter ATP-binding protein APE1732 - A... 120 3e-26
gi|11499426 cobalt transport ATP-binding protein (cbiO-2) [Archa... 119 4e-26
pir||F71654 ABC transporter ATP-binding protein (abcT2) RP508 - ... 119 4e-26
sp|Q58429|YA23_METJA HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 119 5e-26
pir||F64557 dipeptide transport ATP-binding protein dppF - Helic... 119 5e-26
pir||A71952 dipeptide transport system ATP-binding protein - Hel... 119 5e-26
pir||H82355 peptide ABC transporter, ATP-binding protein VC0170 ... 119 5e-26
gb|AAG34388.1|AF197468_4 (AF197468) ATP/GTP binding protein; Nos... 119 5e-26
gi|10957143 Potential ABC transporter [Lactococcus lactis] >gi|1... 118 6e-26
pir||B72417 sugar ABC transporter, ATP-binding protein - Thermot... 118 6e-26
dbj|BAB07364.1| (AP001519) oligopeptide ABC transporter (ATP-bin... 118 6e-26
pir||G69192 ABC transporter (glutamine transport ATP-binding pro... 118 8e-26
gb|AAD09159.1| (AF047429) putative ATP/GTP binding protein NosF ... 118 8e-26
gb|AAK43169.1| Arabinose ABC transporter, ATP-binding protein [S... 118 1e-25
pir||A75208 sugar transport ATP-binding protein. PAB2232 - Pyroc... 118 1e-25
emb|CAB61861.1| (AL133252) putative ABC-transporter ATP binding ... 118 1e-25
gb|AAK41416.1| Sugar ABC transporter [Sulfolobus solfataricus] 117 1e-25
pir||H72356 amino acid ABC transporter, ATP-binding protein - Th... 116 2e-25
pir||B72097 dipeptide transporter ATPase - Chlamydophila pneumon... 116 3e-25
pir||E75444 branched-chain amino acid ABC transporter, ATP-bindi... 116 3e-25
emb|CAB69805.1| (AJ243712) putative ABC-transporter [Bacillus ce... 116 3e-25
pir||G81344 ABC transport system ATP-binding protein Cj0732 [imp... 116 3e-25
emb|CAC11277.1| (AL445063) probable trehalose/maltose transport ... 116 4e-25
pir||C82526 ABC transporter ATP-binding protein XF2695 [imported... 115 7e-25
sp|P55339|ECSA_BACSU ABC-TYPE TRANSPORTER ATP-BINDING PROTEIN EC... 114 1e-24
pir||C72421 oligopeptide ABC transporter, ATP-binding protein - ... 113 2e-24
pir||G82707 ABC transporter ATP-binding protein XF1223 [imported... 113 2e-24
gb|AAD32038.1|AF093787_6 (AF093787) ABC transporter homolog CylA... 111 8e-24
pir||A72279 sugar ABC transporter, ATP-binding protein - Thermot... 111 8e-24
pir||C81187 ABC transporter, ATP-binding protein NMB0549 [import... 111 1e-23
gb|AAD16030.1| (AF082183) ABC transporter MutF [Streptococcus mu... 111 1e-23
dbj|BAB07358.1| (AP001519) oligopeptide ABC transporter (ATP-bin... 111 1e-23
gb|AAG20488.1| (AE005121) sulfate transport system ATP-binding p... 111 1e-23
pir||C81916 probable ABC transporter ATP-binding protein NMA0729... 110 2e-23
pir||B72300 oligopeptide ABC transporter, ATP-binding protein - ... 109 3e-23
pir||H72215 oligopeptide ABC transporter, ATP-binding protein - ... 109 3e-23
pir||F82386 amino acid ABC transporter, ATP-binding protein VCA1... 109 3e-23
pir||C69995 anion transport ABC transporter (ATP-bindi) homolog ... 109 5e-23
pir||T36064 ABC-type transport system ATP-binding protein - Stre... 109 5e-23
pir||S42925 probable transport protein - Staphylococcus aureus >... 108 7e-23
pir||T45204 probable sugar ABC transporter ugpC [imported] - Myc... 108 7e-23
pir||S58789 ATP binding protein nrtC - oscillatoriacean cyanobac... 108 7e-23
pir||S56643 ATP-binding protein nrtC - oscillatoriacean cyanobac... 108 7e-23
pir||D71179 probable sugar ABC transporter - Pyrococcus horikosh... 108 7e-23
sp|P37774|YECC_ECOLI HYPOTHETICAL AMINO-ACID ABC TRANSPORTER ATP... 108 1e-22
pir||A70338 ABC transporter - Aquifex aeolicus >gi|2983088|gb|AA... 108 1e-22
pir||B72424 oligopeptide ABC transporter, ATP-binding protein - ... 108 1e-22
gb|AAF22612.1|AF161268_1 (AF161268) ATP binding protein MalK [Th... 108 1e-22
sp|P45022|YA78_HAEIN PROBABLE AMINO-ACID ABC TRANSPORTER ATP-BIN... 107 2e-22
dbj|BAA15193.1| (D90793) Ribose transport ATP-binding protein Rb... 106 3e-22
sp|P77257|EGO_ECOLI PUTATIVE ABC TRANSPORTER ATP-BINDING PROTEIN... 106 3e-22
pir||E72428 oligopeptide ABC transporter, ATP-binding protein - ... 106 5e-22
emb|CAC11378.1| (AL445063) gliding motility protein related [The... 105 6e-22
gi|9964444 AMV130 [Amsacta moorei entomopoxvirus] >gi|9944653|gb... 99 5e-20
pir||T07715 probable ABC-type transport protein T23J7.90 - Arabi... 97 3e-19
gb|AAF50838.1| (AE003568) CG1494 gene product [Drosophila melano... 93 3e-18
gb|AAF50670.1| (AE003563) CG10226 gene product [Drosophila melan... 92 6e-18
>pir||B75076 daunorubicin resistance ATP-binding protein drra PAB1703 -
Pyrococcus abyssi (strain Orsay)
>gi|5458423|emb|CAB49911.1| (AJ248286) DAUNORUBICIN
RESISTANCE ATP-BINDING PROTEIN DRRA [Pyrococcus abyssi]
Length = 314
Score = 623 bits (1590), Expect = e-178
Identities = 314/314 (100%), Positives = 314/314 (100%)
Query: 1 MPILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPD 60
MPILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPD
Sbjct: 1 MPILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPD 60
Query: 61 SGEVLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCE 120
SGEVLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCE
Sbjct: 61 SGEVLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCE 120
Query: 121 DILELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWEL 180
DILELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWEL
Sbjct: 121 DILELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWEL 180
Query: 181 IKEKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFGKTVRIVLEE 240
IKEKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFGKTVRIVLEE
Sbjct: 181 IKEKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFGKTVRIVLEE 240
Query: 241 PIKNFELLKEELLRVKNVKDVRLARDDSFDVYFKSLDDSINGILQVISPQELKIKDIFTA 300
PIKNFELLKEELLRVKNVKDVRLARDDSFDVYFKSLDDSINGILQVISPQELKIKDIFTA
Sbjct: 241 PIKNFELLKEELLRVKNVKDVRLARDDSFDVYFKSLDDSINGILQVISPQELKIKDIFTA 300
Query: 301 TANFEDVYLEIIER 314
TANFEDVYLEIIER
Sbjct: 301 TANFEDVYLEIIER 314
>pir||E75108 daunorubicin resistance ATP-binding protein (drra-1) PAB1923 -
Pyrococcus abyssi (strain Orsay)
>gi|5458093|emb|CAB49582.1| (AJ248285) daunorubicin
resistance ATP-binding protein (drrA-1) [Pyrococcus
abyssi]
Length = 328
Score = 190 bits (478), Expect = 2e-47
Identities = 104/315 (33%), Positives = 177/315 (56%), Gaps = 10/315 (3%)
Query: 1 MPILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPD 60
M +EV+++ KK+ G+ AV +SF GE+ LGPNGAGKTTT+ ++ T+ +P
Sbjct: 1 MYAIEVENLVKKY----GDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPT 56
Query: 61 SGEVLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCE 120
SG+ +V G D VK P EVRK+I + Q+P L L+ + + + G R+ K+ E
Sbjct: 57 SGKAIVAGHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIE 116
Query: 121 DILELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWEL 180
++L+ L + S G++RR+++A AL + ++FLDEPT G+DP+++ WE
Sbjct: 117 ELLKFVELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEY 176
Query: 181 IKEKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFGK-TVRIVLE 239
I+ E+ +T+ LT+H + E E LADR+ I++ GKI+AEG+ +ELKK G + + LE
Sbjct: 177 IRTMKEEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVGNDIIYLKLE 236
Query: 240 EPIKNFELLKEELLRVKNVKDVRLARDDSFDVYFKSLDDSINGILQVISPQELKIKDIFT 299
P + + LK + +R +L D + ++ +++ + ++ +KI ++
Sbjct: 237 SPKEELKCLKADFIR-----GCKLLPDGRVRIDVENATEALPKLFELAQKNNVKILEVTY 291
Query: 300 ATANFEDVYLEIIER 314
DV+L + R
Sbjct: 292 HRPTLNDVFLHLTGR 306
>gb|AAC44357.1| (U43537) ATP-binding protein involved in mithramycin resistance
[Streptomyces argillaceus]
Length = 320
Score = 182 bits (457), Expect = 5e-45
Identities = 102/314 (32%), Positives = 174/314 (54%), Gaps = 7/314 (2%)
Query: 3 ILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSG 62
+++ K + K F T +G V AV V F+ ++GE++G LGPNGAGKTTT+RM+ T+ P SG
Sbjct: 1 MIQAKGLAKTFTTKQGPVEAVAGVDFTVHTGEIVGFLGPNGAGKTTTMRMLTTLLPPSSG 60
Query: 63 EVLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCEDI 122
++ G D + P +VR I Y++Q P VR ++ R G S+ +A+ +++
Sbjct: 61 TAVIAGRDLLHEPAKVRTHIGYVSQAGGAKPSSPVRRDLVLQGRLYGMSRSEAEARADEV 120
Query: 123 LELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIK 182
+ GL+ A + LS RRV +A L L+FLDEPTA +DP S+ WE I+
Sbjct: 121 ITQLGLEELADRIIQTLSGCQARRVDMALGLMHQPELLFLDEPTANLDPESRNDVWEHIR 180
Query: 183 EKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFG-KTVRI-VLEE 240
+++G TV LT+H L E + L DRV+I+++G+I+AE SP+ LK T+ I V ++
Sbjct: 181 RLRDERGTTVFLTTHYLDEADSLCDRVLIIDKGRIIAEDSPRSLKAAISHDTIEIEVADD 240
Query: 241 PIKNFELLKEELLRVKNVKDVRLARDDSFDVYFKSLDDSINGILQVISPQELKIKDIFTA 300
+ ELL ++V +V + + + + + +L+ + ++++ +
Sbjct: 241 TARATELLAAH----RDVHEVSV-NGTVLSISCRDAERLLADLLRTLESARIRVESLRVL 295
Query: 301 TANFEDVYLEIIER 314
+DV++ + +R
Sbjct: 296 KPTLDDVFMTLTDR 309
>gb|AAD44229.1|AF143772_35 (AF143772) DrrA [Mycobacterium avium]
Length = 315
Score = 182 bits (456), Expect = 6e-45
Identities = 108/314 (34%), Positives = 175/314 (55%), Gaps = 8/314 (2%)
Query: 2 PILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDS 61
P +EV+ +TKKF G +A+ V FS +G V G+LG NGAGKTTT+ +++T+ RP S
Sbjct: 4 PAIEVEGLTKKFG---GSTVALAGVDFSVPAGTVCGLLGHNGAGKTTTINILSTLIRPTS 60
Query: 62 GEVLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCED 121
G V G D V+ P EVR I Q L P L+ R+ ++ + R RG ++R AK ++
Sbjct: 61 GRASVAGHDVVRRPAEVRASIGMAGQFTGLDPMLTGRENLVLFSRLRGLNRRRAKARADE 120
Query: 122 ILELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELI 181
+LE F L A ++ S G+ RRV LA AL ++FLDEPT G+DPRS+R W L+
Sbjct: 121 LLEQFNLVDAADRRLSTYSGGMFRRVDLASALVVPPKVLFLDEPTTGLDPRSRRDVWALV 180
Query: 182 KEKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFGKTVRIVLEEP 241
L +G+TV+LT+ L E + L+D +++++ G+++A G+ +ELK+ G + V
Sbjct: 181 -SSLRVQGITVLLTTQYLEEADVLSDSIVVIDHGRVIASGTSEELKRAVGTSYCQVTP-- 237
Query: 242 IKNFELLKEELLRVKNVKDVRLARD-DSFDVYFKSLDDSINGILQVISPQELKIKDIFTA 300
N L + + + + V + D S V+ ++ + + + L++ DI
Sbjct: 238 -ANPADLPQVVATLTGLDGVDIDNDTGSVSVFAPDGVATLVEVFRRVDALGLELADISLR 296
Query: 301 TANFEDVYLEIIER 314
+ ++ +L + ER
Sbjct: 297 KPSLDEAFLHLTER 310
>pir||C71081 probable resistance ATP-binding protein - Pyrococcus horikoshii
>gi|3257326|dbj|BAA30009.1| (AP000004) 324aa long
hypothetical resistance ATP-binding protein [Pyrococcus
horikoshii]
Length = 324
Score = 182 bits (456), Expect = 6e-45
Identities = 101/309 (32%), Positives = 171/309 (54%), Gaps = 12/309 (3%)
Query: 6 VKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSGEVL 65
V+++ KK+ G+ AV +SF GE+ LGPNGAGKTTT+ M+ T+ +P SG +
Sbjct: 9 VENLVKKY----GDFEAVRGISFKVRRGEIFAFLGPNGAGKTTTVHMLTTLLKPTSGRAI 64
Query: 66 VDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCEDILEL 125
V G D VK EVRK+I + Q+P + L+ + + + R G ++ KK E++L+
Sbjct: 65 VAGHDVVKESREVRKKIGVVFQDPSVDRELTAWENMYIHGRIYGLKGQELKKKIEELLKF 124
Query: 126 FGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIKEKL 185
L ++ S G++RR+++A AL + ++FLDEPT G+DP+++ WE IK
Sbjct: 125 VELWEFKDRQVKYFSGGMQRRLEIARALIHEPEVLFLDEPTIGLDPQTRAHIWEYIKTMK 184
Query: 186 EDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFGKTVRIVLEEPIKNF 245
E+ +T+ LT+H + E E LADR+ I++ GKI+AEG+ +ELKK G + V E
Sbjct: 185 EEHDMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTAEELKKLVGNDIIYVKFE----- 239
Query: 246 ELLKEELLRVKNVKDVRLARDDSFDVYFKSLDDSINGILQVISPQELKIKDIFTATANFE 305
K ++ + ++ ++ + + K+ +++ + + ELKI ++
Sbjct: 240 ---KPTCIQAEFIRGCKVLNNGRVALEVKNAAEALPLVFEKAREMELKILEVTYHRPTLN 296
Query: 306 DVYLEIIER 314
DV+L + R
Sbjct: 297 DVFLHLTGR 305
>pir||D72492 probable ABC transporter ATP-binding protein APE2579 - Aeropyrum
pernix (strain K1) >gi|5106285|dbj|BAA81596.1|
(AP000064) 333aa long hypothetical ABC transporter
ATP-binding protein [Aeropyrum pernix]
Length = 333
Score = 181 bits (454), Expect = 1e-44
Identities = 113/315 (35%), Positives = 175/315 (54%), Gaps = 15/315 (4%)
Query: 5 EVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSGEV 64
E V ++ G AV+ VSF GE+ +LGPNGAGKTTT++M++T+ RP SGE
Sbjct: 7 EAMVVAEELVKDYGGFRAVDGVSFRIARGELFSLLGPNGAGKTTTIKMLSTLLRPTSGEA 66
Query: 65 LVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCEDILE 124
+ G V+ P VR+ I + Q+ +S D + R G +A++ ++L+
Sbjct: 67 WIAGYSIVREPGNVRRVIGLVPQDLTADDEMSGWDNVYIQARLYGLPSSEARERTREVLD 126
Query: 125 LFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIKEK 184
L AH++ S G++R++++A +L ++FLDEPT G+D S+R W I E
Sbjct: 127 YLDLMEAAHRRVATYSGGMRRKLEIAMSLVHSPKVLFLDEPTLGLDVHSRRSLWRYI-ED 185
Query: 185 LEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRF-GKTVRIVLEEPIK 243
L+ VT++LT+H + E E L+DRV I+++G+IVAEG+P+ELK R G+TV I L++P
Sbjct: 186 LKRSAVTILLTTHYMEEAEMLSDRVAIIDRGRIVAEGTPEELKARVKGETVYIELKDPEY 245
Query: 244 NFEL---LKEELLRVKNVKDVRLA-RDDSFDVYFKSLDDSINGILQVISPQELKIKDIFT 299
L LKE+L +V + ++A R D D L ++NG +K I
Sbjct: 246 TEPLVLALKEKLGLEPSVVEGKVAVRVDRADTLLPELARALNG---------FPVKAISI 296
Query: 300 ATANFEDVYLEIIER 314
A EDV++E+ R
Sbjct: 297 TRATLEDVFIELTGR 311
>gb|AAD20382.1| (AF125999) daunorubicin resistance protein A [Mycobacterium avium]
Length = 315
Score = 180 bits (452), Expect = 2e-44
Identities = 108/314 (34%), Positives = 174/314 (55%), Gaps = 8/314 (2%)
Query: 2 PILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDS 61
P +EV+ +TKKF G +A+ V FS +G V G+LG NGAGKTTT+ +++T+ RP S
Sbjct: 4 PAIEVEGLTKKFG---GSTVALAGVDFSVPAGTVCGLLGHNGAGKTTTINILSTLIRPTS 60
Query: 62 GEVLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCED 121
G V G D V P EVR I Q L P L+ R+ ++ + R RG ++R AK ++
Sbjct: 61 GRGNVAGHDVVARPAEVRANIGMAGQFTGLDPMLTGRENLVLFSRLRGLNRRRAKARADE 120
Query: 122 ILELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELI 181
+LE F L A ++ S G+ RRV LA AL ++FLDEPT G+DPRS+R W L+
Sbjct: 121 LLEQFNLVDAADRRLSTYSGGMFRRVDLASALVVPPKVLFLDEPTTGLDPRSRRDVWALV 180
Query: 182 KEKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFGKTVRIVLEEP 241
L +G+TV+LT+ L E + L+D +++++ G+++A G+ +ELK+ G + V
Sbjct: 181 -SSLRVQGITVLLTTQYLEEADVLSDSIVVIDHGRVIASGTSEELKRAVGTSYCQVTP-- 237
Query: 242 IKNFELLKEELLRVKNVKDVRLARD-DSFDVYFKSLDDSINGILQVISPQELKIKDIFTA 300
N L + + + + V + D S V+ ++ + + + L++ DI
Sbjct: 238 -ANPADLPQVVATLTGLDGVDIDNDTGSVSVFAPDGVATLVEVFRRVDALGLELADILLR 296
Query: 301 TANFEDVYLEIIER 314
+ ++ +L + ER
Sbjct: 297 KPSLDEAFLHLTER 310
>pir||S76278 ABC-type transport protein sll0759 - Synechocystis sp. (strain PCC
6803) >gi|1001505|dbj|BAA10130.1| (D64000) ABC
transporter [Synechocystis sp.]
Length = 347
Score = 180 bits (451), Expect = 2e-44
Identities = 103/311 (33%), Positives = 178/311 (57%), Gaps = 10/311 (3%)
Query: 4 LEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSGE 63
++VK + KK+ G + AV ++SF+ GE+ G+LGPNGAGKTTT+R + T+ +PD GE
Sbjct: 11 VQVKQLRKKY----GAIPAVKDISFAVPRGEIFGLLGPNGAGKTTTIRCLCTLAKPDGGE 66
Query: 64 VLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCEDIL 123
+ +DG++ + +P + R+R+ Y+ QE + L+ R+ + ++K + +L
Sbjct: 67 LWIDGVNVLSDPRQARRRLGYVAQEVAIDKILTGRELLQLQASLYHLDAISSQKRIDQLL 126
Query: 124 ELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIKE 183
++ GL +A +K S GLK+R+ LA L ++ LDEP+ G+D S+ WE +++
Sbjct: 127 DILGLTAYADQKTGTYSGGLKKRLDLAAGLLHQPTVLVLDEPSVGLDIESRFILWEFLRQ 186
Query: 184 KLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFG---KTVRIVLEE 240
L D G TV++TSH L E++ LADR+ I++QG ++A G+P ELK R G T+RI
Sbjct: 187 -LRDAGTTVVITSHYLEEIDALADRLAIIDQGTVIATGTPTELKDRVGGDRVTLRIKEFT 245
Query: 241 PIKNFELLKEELLRVKNVKD--VRLARDDSFDVYFKSLDDSINGILQVISPQELKIKDIF 298
+ E + L + V++ V A+ +S ++ + ++ I + + L I +
Sbjct: 246 ADQEAEKASQILRSLAFVQEVIVNQAQGNSLNLVVTPQSNPLSQIEKALLADGLPIFSLA 305
Query: 299 TATANFEDVYL 309
+ + +DVYL
Sbjct: 306 QSRPSLDDVYL 316
>pir||D72257 hypothetical protein TM1403 - Thermotoga maritima (strain MSB8)
>gi|4981967|gb|AAD36474.1|AE001793_4 (AE001793)
antibiotic ABC transporter, ATP-binding protein,
putative [Thermotoga maritima]
Length = 327
Score = 179 bits (449), Expect = 4e-44
Identities = 106/313 (33%), Positives = 168/313 (52%), Gaps = 13/313 (4%)
Query: 3 ILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSG 62
I+ V+++ KKF G+ AV VSFS GE+ LGPNGAGKTTT+ M+ T+ +P SG
Sbjct: 4 IIVVENLVKKF----GDFEAVKGVSFSVKKGEIFAFLGPNGAGKTTTIHMLTTLLKPTSG 59
Query: 63 EVLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCEDI 122
+ V G D +K P EVR++I + Q+ L L+ + + + + G+ KK ++
Sbjct: 60 KAWVAGHDVLKEPREVRRKIGIVFQDQSLDRELTAYENMYIHGKIYGYGGEKLKKRILEL 119
Query: 123 LELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIK 182
LE L K S G+ RR+++A +L + ++FLDEPT G+DP ++ WE I
Sbjct: 120 LEFVELLEFKDKPVKTFSGGMARRLEIARSLIHEPEVLFLDEPTIGLDPHTRAHMWEYIS 179
Query: 183 EKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFGKTVRIV-LEEP 241
+ ++ +T+ LT+H + E E LADRV I++ GKI+A G+P ELK+ GK + V E
Sbjct: 180 KMKKEHNMTIFLTTHYMDEAEQLADRVAIIDHGKIIALGTPTELKRMVGKEIIYVRFSEA 239
Query: 242 IKNFELLKEELLRVKNVKDVRLARDDSFDVYFKSLDDSINGILQVISPQELKIKDIFTAT 301
+ E L ++ R D ++ + +I I ++ + LKI++I
Sbjct: 240 V--------ECLEGDFIESCRKLPDGRLELNVEDSGRAIPKIFELAQQKGLKIEEITYHK 291
Query: 302 ANFEDVYLEIIER 314
DV+L + R
Sbjct: 292 PTLNDVFLHLTGR 304
>pir||D70984 probable drrA protein - Mycobacterium tuberculosis (strain H37RV)
>gi|1781083|emb|CAB06095.1| (Z83857) drrA [Mycobacterium
tuberculosis]
Length = 331
Score = 175 bits (438), Expect = 8e-43
Identities = 86/232 (37%), Positives = 141/232 (60%), Gaps = 1/232 (0%)
Query: 17 KGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSGEVLVDGIDAVKNPL 76
KG+++A+++VSF GEV+G+LGPNGAGKTT + +++T+ RPD+G ++ G D V P
Sbjct: 19 KGKIVALDDVSFKVRRGEVIGLLGPNGAGKTTMVDILSTLTRPDAGSAIIAGYDVVSEPA 78
Query: 77 EVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCEDILELFGLKTHAHKKP 136
VR+ I Q+ + LS ++ + R G SK A+K ++LE F L ++
Sbjct: 79 GVRRSIMVTGQQVAVDDALSGEQNLVLFGRLWGLSKSAARKRAAELLEQFSLVHAGKRRV 138
Query: 137 FQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIKEKLEDKGVTVILTS 196
S G++RR+ +AC L + FLDEPT G+DPRS++ W+L+ + G+ +LT+
Sbjct: 139 GTYSGGMRRRIDIACGLVVQPQVAFLDEPTTGLDPRSRQAIWDLV-ASFKKLGIATLLTT 197
Query: 197 HDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFGKTVRIVLEEPIKNFELL 248
L E + L+DR+I+++ G I+AEG+ ELK R G T ++ +K+ + +
Sbjct: 198 QYLEEADALSDRIILIDHGIIIAEGTANELKHRAGDTFCEIVPRDLKDLDAI 249
>pir||C69049 ABC transporter (ATP-binding protein) - Methanobacterium
thermoautotrophicum (strain Delta H)
>gi|2622479|gb|AAB85847.1| (AE000900) ABC transporter
(ATP-binding protein) [Methanobacterium
thermoautotrophicum]
Length = 319
Score = 174 bits (436), Expect = 1e-42
Identities = 109/309 (35%), Positives = 170/309 (54%), Gaps = 14/309 (4%)
Query: 3 ILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSG 62
++EV+SV+K F G + A++N+SFS GE++GI+G NGAGKTT +R+IA I PDSG
Sbjct: 18 MIEVESVSKSF----GRIRALDNLSFSVAEGELMGIIGHNGAGKTTAIRIIAGILHPDSG 73
Query: 63 EVLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCEDI 122
V V G D ++PL V+ I Y+ +EP+L D + Y+ G + ++
Sbjct: 74 TVRVGGHDVTEDPLSVKSMIGYLPEEPNLYERFRAGDLLRYFGELYGVPRDVLDDRIAEL 133
Query: 123 LELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIK 182
LEL G+ A S GL++R+ +A AL D P++ DEPT G+DP + E I+
Sbjct: 134 LELVGMTDRAMDPINTFSKGLRQRIGIARALIHDPPIIIFDEPTMGLDPATAFSIREFIR 193
Query: 183 EKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFGKTVRIVLEEPI 242
+ K T+IL +H + E EYL DRV I+NQG+I+ G+P ELK + +VLE +
Sbjct: 194 DLKGSK--TMILCTHYMEEAEYLCDRVAIINQGRILDIGTPDELKSKIRGD--LVLEVKV 249
Query: 243 KNFELLKE-ELLRVKNVKDVRLARDDSFDVYFKSLDDSINGILQVISPQELKIKDIFTAT 301
++ + E +L+ + VK V + D S +I+G++ + + + T
Sbjct: 250 RDISSVGEGDLMMIPGVKSVEV--DGSTLRVSLENRGAISGVIMELG---ANVSGVNTRE 304
Query: 302 ANFEDVYLE 310
A DV++E
Sbjct: 305 ATLNDVFIE 313
>dbj|BAB06933.1| (AP001518) ABC transporter (ATP-binding protein) [Bacillus
halodurans]
Length = 318
Score = 173 bits (434), Expect = 2e-42
Identities = 101/314 (32%), Positives = 172/314 (54%), Gaps = 11/314 (3%)
Query: 3 ILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSG 62
I+++ +TK++ + AV+++S S GE+ G+LGPNGAGKTT++ M+ + P SG
Sbjct: 5 IIKLNEITKRYD----DHYAVDHLSLSIRKGEIFGLLGPNGAGKTTSILMMLGLSEPTSG 60
Query: 63 EVLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCEDI 122
V V GID+ K P+EV++++ Y+ P ++ + ++Y G K +A + +
Sbjct: 61 TVQVAGIDSTKYPIEVKRKVGYLPDNVGFYPDMTGMENLLYTASLNGIQKIEAIERANTL 120
Query: 123 LELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIK 182
LE GL A KK Q S G+K+R+ LA L ++ LDEPT G+DP R LI+
Sbjct: 121 LEKVGLTEAAKKKTGQYSRGMKQRLGLADVLMKGPEIIILDEPTLGIDPEGVRDFLHLIR 180
Query: 183 EKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFGKTVRIVLE--- 239
+++ +TV+L SH L++V+ + DRV I GK++A G +L KR K +V+
Sbjct: 181 NLNQNENLTVLLCSHHLHQVQQVCDRVGIFVDGKLLAYGDLDQLVKRLFKHESVVIHVAA 240
Query: 240 EPIKNFELLKEELLRVKNVKDVRLARDDSFDVYFKSLDDSINGILQVISPQELKIKDIFT 299
PI E L +L ++ VK+V + ++D D+Y + +D+ I ++I + ++
Sbjct: 241 SPID--ESLLNQLKTIEQVKNVDVIQEDRLDIYCR--EDASATISKLIVESGSNLYHLYK 296
Query: 300 ATANFEDVYLEIIE 313
+++Y E
Sbjct: 297 KHFGLDEIYHRYFE 310
>pir||S73019 daunorubicin resistance protein drrA - Mycobacterium leprae
>gi|467205|gb|AAA17362.1| (U00023) drrA; L518_F2_43
[Mycobacterium leprae]
Length = 331
Score = 171 bits (430), Expect = 7e-42
Identities = 90/239 (37%), Positives = 144/239 (59%), Gaps = 3/239 (1%)
Query: 6 VKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSGEVL 65
V+ V K + KG++IA+++VSF + GEV+G+LGPNGAGKTT + +++T+ RPD G
Sbjct: 10 VRGVRKTYG--KGKIIALDDVSFDVDRGEVIGLLGPNGAGKTTMVDILSTLTRPDRGLAT 67
Query: 66 VDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCEDILEL 125
V G D V P VR+ I Q+ + LS +I + R G SK A+ +++LE
Sbjct: 68 VAGYDVVSEPAGVRRSIMVTGQQVAVDDQLSGEQNLILFGRLYGLSKSVARVRTQELLEQ 127
Query: 126 FGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIKEKL 185
F L ++ S G++RR+ +AC L + FLDEPT G+DPRS++ W+L+
Sbjct: 128 FDLLHAGKRRVGTYSGGMRRRIDIACGLVVQPQVAFLDEPTTGLDPRSRQAIWDLV-ASF 186
Query: 186 EDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFGKTVRIVLEEPIKN 244
+ G+ +LT+ L E + L+DR+I+++ G ++AEG+ ELK R G+T ++ +K+
Sbjct: 187 KQIGIATLLTTQYLEEADELSDRIILIDHGTVIAEGTASELKHRVGETFCEIVPRDLKD 245
>gi|11499468 daunorubicin resistance ATP-binding protein (drrA) [Archaeoglobus
fulgidus] >gi|7445660|pir||C69485 daunorubicin
resistance ATP-binding protein (drrA) homolog -
Archaeoglobus fulgidus >gi|2648659|gb|AAB89368.1|
(AE000972) daunorubicin resistance ATP-binding protein
(drrA) [Archaeoglobus fulgidus]
Length = 398
Score = 170 bits (427), Expect = 2e-41
Identities = 102/314 (32%), Positives = 171/314 (53%), Gaps = 12/314 (3%)
Query: 1 MPILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPD 60
M +EV+++ KKF G+ AV VSF GE+ LGPNGAGKTTT+ ++ T+ +P
Sbjct: 77 MYAIEVENLVKKF----GDFEAVRGVSFKVKRGEIFAFLGPNGAGKTTTVHILTTLLKPT 132
Query: 61 SGEVLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCE 120
SG+ V G+D V+ EVR+RI + Q+P + L+ + ++ + G ++ K+ E
Sbjct: 133 SGKAFVAGLDVVREAREVRRRIGIVFQDPSVDRDLTAYENMLVHGGVYGLKGKELKEKIE 192
Query: 121 DILELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWEL 180
+L+ L K S G++RR+++A +L ++FLDEPT G+DP+++ W
Sbjct: 193 RLLKFVELWEFRDKLVKYFSGGMQRRLEIARSLLHHPEVLFLDEPTIGLDPQTRAHVWSY 252
Query: 181 IKEKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFGKTVRIVLEE 240
I+ E++ +T+ LT+H + E E LADRV I++ G+I+AEGS +ELK+ G V + E
Sbjct: 253 IEAMKEEQDMTIFLTTHYMEEAEKLADRVAIIDHGRIIAEGSVEELKRLVGSDVVYLKVE 312
Query: 241 PIKNFELLKEELLRVKNVKDVRLARDDSFDVYFKSLDDSINGILQVISPQELKIKDIFTA 300
E + L + D R+ D S + ++I I ++ + ++I ++
Sbjct: 313 --NGAECFETGLGNCVVLPDGRIRIDVS------NASEAIPKIFEIAREKGVRILEVTYH 364
Query: 301 TANFEDVYLEIIER 314
DV+L + R
Sbjct: 365 RPTLNDVFLHLTGR 378
>pir||S74048 probable daunorubicin resistance protein - Sulfolobus solfataricus
>gi|1707742|emb|CAA69462.1| (Y08256) daunorubicin
resistance ATP-binding protein DrrA [Sulfolobus
solfataricus]
Length = 339
Score = 170 bits (426), Expect = 2e-41
Identities = 98/304 (32%), Positives = 173/304 (56%), Gaps = 9/304 (2%)
Query: 8 SVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSGEVLVD 67
++TK+F G+ +AV++++F GE+ G LGPNGAGK+TT++M+ T+ +P G V
Sbjct: 16 NLTKRF----GKFVAVDHINFEVYEGEIFGFLGPNGAGKSTTIKMLTTVLKPSEGTATVS 71
Query: 68 GIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCEDILELFG 127
G D +K P VR+ I + QE L+ + ++ G KR A++ +++LE+
Sbjct: 72 GYDVIKQPALVRQSIGVVPQEYTADEDLTGWENMMMMAGLYGIPKRIAEERAKELLEMVE 131
Query: 128 LKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIKEKLED 187
L A +K S G++RR+++A +L S ++FLDEPT G+D +++ W+ I + E+
Sbjct: 132 LTYAAKRKVETYSGGMRRRLEIAMSLISRPRILFLDEPTLGLDAQTRAAIWQYIMKLKEE 191
Query: 188 KGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFGKTVRIVLEEPIKNFEL 247
+T+ +T+H L E + DR+ I+++GKI+A GSPKELK++ G V+ N EL
Sbjct: 192 YKMTIFVTTHYLEEADMYGDRIAIIDKGKILAIGSPKELKEKVGGD---VVSLQTSNDEL 248
Query: 248 LKEELLRVKN-VKDVRLARDDSFDVYFKSLDDSINGILQVISPQELKIKDIFTATANFED 306
+ + K+ + DVR A D + ++ ++ IL+ + +K+ + ++
Sbjct: 249 AIKIISSSKDGILDVRKA-SDGIRIKVRNGEEKAPEILESLVKNGIKVSRMSITEPTMDE 307
Query: 307 VYLE 310
VY+E
Sbjct: 308 VYME 311
>gb|AAK42315.1| ABC transporter, ATP binding protein. [Sulfolobus solfataricus]
Length = 339
Score = 170 bits (426), Expect = 2e-41
Identities = 98/304 (32%), Positives = 173/304 (56%), Gaps = 9/304 (2%)
Query: 8 SVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSGEVLVD 67
++TK+F G+ +AV++++F GE+ G LGPNGAGK+TT++M+ T+ +P G V
Sbjct: 16 NLTKRF----GKFVAVDHINFEVYEGEIFGFLGPNGAGKSTTIKMLTTVLKPSEGTATVS 71
Query: 68 GIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCEDILELFG 127
G D +K P VR+ I + QE L+ + ++ G KR A++ +++LE+
Sbjct: 72 GYDVIKQPALVRQSIGVVPQEYTADEDLTGWENMMMMAGLYGIPKRIAEERAKELLEMVE 131
Query: 128 LKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIKEKLED 187
L A +K S G++RR+++A +L S ++FLDEPT G+D +++ W+ I + E+
Sbjct: 132 LTYAAKRKVETYSGGMRRRLEIAMSLISRPRILFLDEPTLGLDAQTRAAIWQYIMKLKEE 191
Query: 188 KGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFGKTVRIVLEEPIKNFEL 247
+T+ +T+H L E + DR+ I+++GKI+A GSPKELK++ G V+ N EL
Sbjct: 192 YKMTIFVTTHYLEEADMYGDRIAIIDKGKILAIGSPKELKEKVGGD---VVSLQTSNDEL 248
Query: 248 LKEELLRVKN-VKDVRLARDDSFDVYFKSLDDSINGILQVISPQELKIKDIFTATANFED 306
+ + K+ + DVR A D + ++ ++ IL+ + +K+ + ++
Sbjct: 249 AIKIISSSKDGILDVRKA-SDGIRIKVRNGEEKAPEILESLVKNGIKVSRMSITEPTMDE 307
Query: 307 VYLE 310
VY+E
Sbjct: 308 VYME 311
>emb|CAB94554.1| (AL359152) putative ABC transporter, ATP-binding subunit
[Streptomyces coelicolor A3(2)]
Length = 260
Score = 167 bits (418), Expect = 2e-40
Identities = 86/240 (35%), Positives = 135/240 (55%)
Query: 1 MPILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPD 60
M I+ + + F T +G V AV + + GE+LG LGPNGAGKTTTLRM+ T+ P
Sbjct: 1 MAIISTAGLARTFATRRGPVEAVRGIDLTVREGEILGFLGPNGAGKTTTLRMLTTLLAPT 60
Query: 61 SGEVLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCE 120
G V G D +P VR Y+ Q + P ++VR+ ++ R S+ A +
Sbjct: 61 GGAATVAGHDLATDPAGVRAACGYVAQSGGVDPQITVREELVTQGRLYRLSRARAAERAG 120
Query: 121 DILELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWEL 180
++ GL ++ LS G +RR+ +A AL+ ++FLDEPT G+DP S+ W+L
Sbjct: 121 ELARDLGLTGLLDRRCGALSGGQRRRLDIAMALTHRPKVLFLDEPTTGLDPGSRADLWDL 180
Query: 181 IKEKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFGKTVRIVLEE 240
++ + G TV LT+H L E + L+DR+++++ G +VAEG+P LK +G + L++
Sbjct: 181 VRRLRDAHGTTVFLTTHYLDEADALSDRLVVVDGGTVVAEGTPAALKLEYGGSPDATLQD 240
>pir||H71008 probable ATP-binding transport protein - Pyrococcus horikoshii
>gi|3257789|dbj|BAA30472.1| (AP000006) 308aa long
hypothetical ATP-binding transport protein [Pyrococcus
horikoshii]
Length = 308
Score = 166 bits (417), Expect = 2e-40
Identities = 103/318 (32%), Positives = 183/318 (57%), Gaps = 19/318 (5%)
Query: 1 MPILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPD 60
M +EV+ +TK + G+ A++N+SF + G V G LGPNGAGKTTT+ + I PD
Sbjct: 1 MYAIEVEKLTKSY----GKFKAIDNLSFVVDEGIVFGFLGPNGAGKTTTILSMLGIIIPD 56
Query: 61 SGEVLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCE 120
SG+V + G D K PL+ ++R+ ++ + + L+ + ++ F SK++ +K E
Sbjct: 57 SGDVRILGYDIFKEPLKAKERLGFLPENATIYEELTAWRNLDFFASFYRMSKQEKEKRIE 116
Query: 121 DILELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWEL 180
++L+L GL ++K S G+++R+ LA AL +D L+ LDEPT+G+DP R ++
Sbjct: 117 ELLKLVGLWDVRYRKAKTFSKGMRQRLLLAQALINDPELLILDEPTSGLDPEGARLVKDI 176
Query: 181 IKEKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRF----GKTVRI 236
I+E+ +G TV +SH L EVE LAD+V I+ +GK+ G+ +E+KK++ G ++I
Sbjct: 177 IREQ-RKQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYEIKI 235
Query: 237 VLEEPIKNFELLKEELLRVKNVKDVRLARDDSFDVYFKSLDDSINGILQVISPQELKIKD 296
++P+ E+ +++R++ + + ++ KS D I + ++ + + I
Sbjct: 236 ETKQPLPELEI--PDIIRIEKTTENKAI------IFAKS--DIRESISEELAKKGITIIS 285
Query: 297 IFTATANFEDVYLEIIER 314
+ + EDV+L+ I R
Sbjct: 286 LEIEEPSLEDVFLKTIYR 303
>emb|CAC11370.1| (AL445063) gliding motility protein related [Thermoplasma
acidophilum]
Length = 305
Score = 166 bits (416), Expect = 3e-40
Identities = 103/312 (33%), Positives = 175/312 (56%), Gaps = 14/312 (4%)
Query: 3 ILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSG 62
++EV+ + + + G V++VSF GE+ G+LG NGAGKTTT+R + TI G
Sbjct: 5 VIEVEHLRQTYD---GRTFVVDDVSFYVLKGEIYGLLGKNGAGKTTTIRTMTTILPVHYG 61
Query: 63 EVLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCEDI 122
+V + G+D +N ++R+RI + Q SV + Y + K E++
Sbjct: 62 KVRILGMDVSENAEKIRRRIGVVLQNESF-DFASVERNLKVYGMLWDVPREVLKARIEEV 120
Query: 123 LELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIK 182
LE+F L + +LS G K+R+Q+A D+ L+FLDEPT G+DP +R I+
Sbjct: 121 LEVFDLGQLRKVRAMELSGGQKKRLQVAREFLHDMDLLFLDEPTVGLDPIMRRSVLNYIR 180
Query: 183 EKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFG--KTVRIVLEE 240
+K KG+TV+ T+ + E +YL DR+ IMN+GKIVAEG+ +LK ++G KT+ +V+
Sbjct: 181 DKAR-KGLTVLYTTQIMEEADYLCDRIAIMNRGKIVAEGTSSDLKSKYGDLKTIHVVVSG 239
Query: 241 PIKNFELLKEELLRVKNVKDVRLARDDSFDVYFKSLDDSINGILQVISPQELKIKDIFTA 300
I E LR K +DV L ++ + K+++D + ++ + + ++I+ I
Sbjct: 240 EI------DYEDLRAKFPEDV-LFDNEEIRIVSKNVEDILPDLIIYLKTKGIRIERISVE 292
Query: 301 TANFEDVYLEII 312
++ +DV+L+++
Sbjct: 293 ESSLDDVFLKVV 304
>dbj|BAB05817.1| (AP001514) ABC transporter (ATP-binding protein) (daunorubicin
resistance) [Bacillus halodurans]
Length = 310
Score = 166 bits (416), Expect = 3e-40
Identities = 104/317 (32%), Positives = 171/317 (53%), Gaps = 16/317 (5%)
Query: 3 ILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSG 62
+LE ++ K F KG+ AV V+ NSGE +G+LGPNGAGK+TT+ MI+T+ +P SG
Sbjct: 1 MLETINLCKTF---KGQP-AVQEVNMYLNSGESVGLLGPNGAGKSTTISMISTLIKPTSG 56
Query: 63 EVLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCEDI 122
E+ ++GI+ + +P ++RK + + QE L LS + + ++ + + +
Sbjct: 57 EIKLNGINIISHPGDIRKILGVVPQELALYQELSAYENLKFFGSTYKMKGKHLENRIQHA 116
Query: 123 LELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIK 182
LE+ GLK S G+KRR+ +A AL + ++ LDEPT G+DP+S+ E ++
Sbjct: 117 LEIVGLKDRQKDLVKTFSGGMKRRINIAAALLHEPKILILDEPTVGIDPQSRNHILETVR 176
Query: 183 EKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFGKTVRIVLEEPI 242
E++G TV+ TSH + EVE L DR+ IM+ G+I+A G+ +EL + I+ E
Sbjct: 177 TLNENEGTTVLYTSHYMEEVEQLCDRLYIMDHGEIIAAGTKEEL-------LSILSTEDT 229
Query: 243 KNFELLKEELLRVKNVKDVRLAR-----DDSFDVYFKSLDDSINGILQVISPQELKIKDI 297
EL K + V+NVK + R + K I ++ + ++++
Sbjct: 230 IKVELSKIDETFVQNVKMIEGVRKVEASHSQLKMIAKKGSHLIRELVHLTDQHQIQMIHF 289
Query: 298 FTATANFEDVYLEIIER 314
T T + EDV+L + R
Sbjct: 290 HTETPSLEDVFLHLTGR 306
>pir||E75122 hypothetical protein PAB1845 - Pyrococcus abyssi (strain Orsay)
>gi|5458205|emb|CAB49694.1| (AJ248285) hypothetical
protein [Pyrococcus abyssi]
Length = 305
Score = 165 bits (414), Expect = 5e-40
Identities = 100/318 (31%), Positives = 183/318 (57%), Gaps = 19/318 (5%)
Query: 1 MPILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPD 60
M ++E++++TK + G+ AV+N+S G + G LGPNGAGKTTT+ + I PD
Sbjct: 1 MKVIEIENLTKSY----GKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPD 56
Query: 61 SGEVLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCE 120
SG V + G D K P++ ++R+ ++ + + L+ + ++ F K++ +K E
Sbjct: 57 SGSVRLLGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIE 116
Query: 121 DILELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWEL 180
++L+L GL ++K S G+K+R+ LA AL +D L+ LDEPT+G+DP+ R ++
Sbjct: 117 ELLKLVGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDI 176
Query: 181 IKEKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRF----GKTVRI 236
I E+ + +G TV +SH L EVE LAD+V I+ +GK+ G+ +E+KK++ G +++
Sbjct: 177 ILEQ-KKQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYEIKV 235
Query: 237 VLEEPIKNFELLKEELLRVKNVKDVRLARDDSFDVYFKSLDDSINGILQVISPQELKIKD 296
++P EL +++R++ + D ++ ++ KS D + + +S + + +
Sbjct: 236 ETKQPFPEIEL--PDVIRIEKIADNKVL------IFAKS--DIREILSEELSKRGITVLS 285
Query: 297 IFTATANFEDVYLEIIER 314
+ + EDV+L+ I R
Sbjct: 286 LEIEEPSLEDVFLKTIYR 303
>sp|P32010|DRRA_STRPE DAUNORUBICIN RESISTANCE ATP-BINDING PROTEIN DRRA
>gi|625935|pir||S27707 daunorubicin resistance protein -
Streptomyces peucetius >gi|153230|gb|AAA74717.1|
(M73758) daunorubicin resistance protein [Streptomyces
peucetius]
Length = 330
Score = 164 bits (410), Expect = 2e-39
Identities = 98/293 (33%), Positives = 163/293 (55%), Gaps = 8/293 (2%)
Query: 22 AVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSGEVLVDGIDAVKNPLEVRKR 81
AV+ + + +G V GILGPNGAGK+TT+RM+AT+ RPD G V G D P VR+R
Sbjct: 23 AVDGLDLNVPAGLVYGILGPNGAGKSTTIRMLATLLRPDGGTARVFGHDVTSEPDTVRRR 82
Query: 82 IAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCEDILELFGLKTHAHKKPFQLST 141
I+ Q + L+ + ++ R +G+S A++ ++++ FGL + S
Sbjct: 83 ISVTGQYASVDEGLTGTENLVMMGRLQGYSWARARERAAELIDGFGLGDARDRLLKTYSG 142
Query: 142 GLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIKEKLEDKGVTVILTSHDLYE 201
G++RR+ +A ++ L+FLDEPT G+DPRS+ + W++++ L D G TV+LT+ L E
Sbjct: 143 GMRRRLDIAASIVVTPDLLFLDEPTTGLDPRSRNQVWDIVR-ALVDAGTTVLLTTQYLDE 201
Query: 202 VEYLADRVIIMNQGKIVAEGSPKELKKRFGKTV-RIVLEEPIKNFELLKEELLRVKNVKD 260
+ LADR+ +++ G+++AEG+ ELK G V R+ L + E E LL +
Sbjct: 202 ADQLADRIAVIDHGRVIAEGTTGELKSSLGSNVLRLRLHDAQSRAE--AERLLSAE--LG 257
Query: 261 VRLARDDSFDVYFKSLDDSINGI--LQVISPQELKIKDIFTATANFEDVYLEI 311
V + RD +DD G+ L +S L+++ ++ ++V+L +
Sbjct: 258 VTIHRDSDPTALSARIDDPRQGMRALAELSRTHLEVRSFSLGQSSLDEVFLAL 310
>pir||B64816 ABC-type transport protein ybhF - Escherichia coli
>gi|1787012|gb|AAC73881.1| (AE000181) putative
ATP-binding component of a transport system [Escherichia
coli K12] >gi|4062352|dbj|BAA35454.1| (D90716) ATP
binding cassette transporter ABC2 [Escherichia coli]
Length = 583
Score = 162 bits (406), Expect = 5e-39
Identities = 87/225 (38%), Positives = 140/225 (61%), Gaps = 6/225 (2%)
Query: 3 ILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSG 62
++E K +TKKF G+ A ++V+F+ GE+ G+LGPNGAGK+TT +M+ + P SG
Sbjct: 334 VIEAKELTKKF----GDFAATDHVNFAVKRGEIFGLLGPNGAGKSTTFKMMCGLLVPTSG 389
Query: 63 EVLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCEDI 122
+ LV G+D ++ + R+ + YM Q+ L L+V + ++ G R + +
Sbjct: 390 QALVLGMDLKESSGKARQHLGYMAQKFSLYGNLTVEQNLRFFSGVYGLRGRAQNEKISRM 449
Query: 123 LELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIK 182
E FGLK+ A +L G K+R+ LAC+L + ++FLDEPT+GVDP ++R+ W I
Sbjct: 450 SEAFGLKSIASHATDELPLGFKQRLALACSLMHEPDILFLDEPTSGVDPLTRREFWLHIN 509
Query: 183 EKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELK 227
+E KGVTV++T+H + E EY DR+ ++ +GK++A G+P +LK
Sbjct: 510 SMVE-KGVTVMVTTHFMDEAEY-CDRIGLVYRGKLIASGTPDDLK 552
Score = 132 bits (329), Expect = 5e-30
Identities = 88/310 (28%), Positives = 160/310 (51%), Gaps = 10/310 (3%)
Query: 3 ILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSG 62
++ + + K+FP +A + + A G V G++GP+GAGKTT +RM+A + +PDSG
Sbjct: 10 VITLNGLEKRFPGMDKPAVAPLDCTIHA--GYVTGLVGPDGAGKTTLMRMLAGLLKPDSG 67
Query: 63 EVLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCEDI 122
V G D +KN + + YM Q+ L L+V + + Y R + K+ +
Sbjct: 68 SATVIGFDPIKNDGALHAVLGYMPQKFGLYEDLTVMENLNLYADLRSVTGEARKQTFARL 127
Query: 123 LELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIK 182
LE L + +LS G+K+++ LAC L + ++ LDEP GVDP S+R+ W+++
Sbjct: 128 LEFTSLGPFTGRLAGKLSGGMKQKLGLACTLVGEPKVLLLDEPGVGVDPISRRELWQMVH 187
Query: 183 EKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFGKTVRIVLEEPI 242
E L +G+ ++ ++ L E E D V++MN+G+++ +G PK L + ++ P
Sbjct: 188 E-LAGEGMLILWSTSYLDEAEQCRD-VLLMNEGELLYQGEPKALTQTMAGR-SFLMTSPH 244
Query: 243 KNFELLKEELLRVKNVKDVRLARDDSFDVYFKSLDDSINGILQVISPQELKIKDIFTATA 302
+ L + L++ V D + + S + K + + + I E+ I + T
Sbjct: 245 EGNRKLLQRALKLPQVSD-GMIQGKSVRLILKK-EATPDDIRHADGMPEININE---TTP 299
Query: 303 NFEDVYLEII 312
FED +++++
Sbjct: 300 RFEDAFIDLL 309
>sp|P75776|YBHF_ECOLI HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PROTEIN YBHF
Length = 578
Score = 162 bits (406), Expect = 5e-39
Identities = 87/225 (38%), Positives = 140/225 (61%), Gaps = 6/225 (2%)
Query: 3 ILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSG 62
++E K +TKKF G+ A ++V+F+ GE+ G+LGPNGAGK+TT +M+ + P SG
Sbjct: 329 VIEAKELTKKF----GDFAATDHVNFAVKRGEIFGLLGPNGAGKSTTFKMMCGLLVPTSG 384
Query: 63 EVLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCEDI 122
+ LV G+D ++ + R+ + YM Q+ L L+V + ++ G R + +
Sbjct: 385 QALVLGMDLKESSGKARQHLGYMAQKFSLYGNLTVEQNLRFFSGVYGLRGRAQNEKISRM 444
Query: 123 LELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIK 182
E FGLK+ A +L G K+R+ LAC+L + ++FLDEPT+GVDP ++R+ W I
Sbjct: 445 SEAFGLKSIASHATDELPLGFKQRLALACSLMHEPDILFLDEPTSGVDPLTRREFWLHIN 504
Query: 183 EKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELK 227
+E KGVTV++T+H + E EY DR+ ++ +GK++A G+P +LK
Sbjct: 505 SMVE-KGVTVMVTTHFMDEAEY-CDRIGLVYRGKLIASGTPDDLK 547
Score = 132 bits (329), Expect = 5e-30
Identities = 88/310 (28%), Positives = 160/310 (51%), Gaps = 10/310 (3%)
Query: 3 ILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSG 62
++ + + K+FP +A + + A G V G++GP+GAGKTT +RM+A + +PDSG
Sbjct: 5 VITLNGLEKRFPGMDKPAVAPLDCTIHA--GYVTGLVGPDGAGKTTLMRMLAGLLKPDSG 62
Query: 63 EVLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCEDI 122
V G D +KN + + YM Q+ L L+V + + Y R + K+ +
Sbjct: 63 SATVIGFDPIKNDGALHAVLGYMPQKFGLYEDLTVMENLNLYADLRSVTGEARKQTFARL 122
Query: 123 LELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIK 182
LE L + +LS G+K+++ LAC L + ++ LDEP GVDP S+R+ W+++
Sbjct: 123 LEFTSLGPFTGRLAGKLSGGMKQKLGLACTLVGEPKVLLLDEPGVGVDPISRRELWQMVH 182
Query: 183 EKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFGKTVRIVLEEPI 242
E L +G+ ++ ++ L E E D V++MN+G+++ +G PK L + ++ P
Sbjct: 183 E-LAGEGMLILWSTSYLDEAEQCRD-VLLMNEGELLYQGEPKALTQTMAGR-SFLMTSPH 239
Query: 243 KNFELLKEELLRVKNVKDVRLARDDSFDVYFKSLDDSINGILQVISPQELKIKDIFTATA 302
+ L + L++ V D + + S + K + + + I E+ I + T
Sbjct: 240 EGNRKLLQRALKLPQVSD-GMIQGKSVRLILKK-EATPDDIRHADGMPEININE---TTP 294
Query: 303 NFEDVYLEII 312
FED +++++
Sbjct: 295 RFEDAFIDLL 304
>pir||C71197 probable ATP-binding transport protein - Pyrococcus horikoshii
>gi|3258287|dbj|BAA30970.1| (AP000007) 318aa long
hypothetical ATP-binding transport protein [Pyrococcus
horikoshii]
Length = 318
Score = 161 bits (404), Expect = 8e-39
Identities = 100/323 (30%), Positives = 180/323 (54%), Gaps = 18/323 (5%)
Query: 1 MPILEVKSVTK----KFPTPKGEVI---AVNNVSFSANSGEVLGILGPNGAGKTTTLRMI 53
M ++EV+++ K K P P +V A+ ++F GE+ G+LGPNGAGKTTT++++
Sbjct: 1 MNVIEVRNLRKLYPKKIPLPFRKVEWFEALKGITFRVKKGELFGLLGPNGAGKTTTIKIL 60
Query: 54 ATIYRPDSGEVLVDGIDAVKNPLEVRKRIAYMTQ-EPDLTPPLSVRDYIIYYFRFRGFSK 112
T+ P SGE V G+D VK+ E+RKRI + + E L L+ + + Y+ +
Sbjct: 61 TTLLEPSSGEAKVLGLDVVKDAREIRKRINLVAEGERTLYWRLTAYENLRYFASIYYIPR 120
Query: 113 RDAKKHCEDILELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPR 172
R+A+K E++L++ GL + S G+K+R+ +A AL +D ++FLDEPT G+D +
Sbjct: 121 REAEKRIEELLKMVGLWDRRNDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQ 180
Query: 173 SKRKTWELIKEKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFGK 232
S EL++ ++++G TV+LT+H + E E L DR+ I++ GKI+A +P+ LK+
Sbjct: 181 SAVFVRELVRRLVDEEGKTVLLTTHYMNEAEELCDRIAIIDHGKIIALNTPEGLKRMVRN 240
Query: 233 TVRIVLEEPIKNFELLKE-ELLRVKNVKDVRLARDDSFDVYFKSLDDSINGILQVISPQE 291
++E ++N+ + L++V + V + R ++ I +++ +
Sbjct: 241 DT--IVEVRVRNYPGVNPFGLVKVDDRNGVVILRG-------SLEEEEIPKLVEFLVKSN 291
Query: 292 LKIKDIFTATANFEDVYLEIIER 314
K+ + EDV++++ R
Sbjct: 292 AKVLSVEVKEPTLEDVFIKLTGR 314
>pir||B69065 ABC transporter (ATP-binding, daunorubicin resistance) -
Methanobacterium thermoautotrophicum (strain Delta H)
>gi|2622603|gb|AAB85962.1| (AE000909) ABC transporter
(ATP-binding [Methanobacterium thermoautotrophicum]
Length = 350
Score = 161 bits (403), Expect = 1e-38
Identities = 112/351 (31%), Positives = 176/351 (49%), Gaps = 45/351 (12%)
Query: 4 LEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSGE 63
+E +TK + G+ AV++++ + G LGPNGAGKTTT++M+ + P SG
Sbjct: 5 IETFDLTKVY----GDFKAVDSLNMKIEKNSIFGFLGPNGAGKTTTIKMLTCLIPPSSGT 60
Query: 64 VLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCEDIL 123
V G D +KNP EVR++I + Q+ L L+ R+ + F G + + E+++
Sbjct: 61 ARVAGYDILKNPDEVRQQIGMVPQKVSLYEDLTARENVEMCADFYGMPEDLKESRIEELM 120
Query: 124 ELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIKE 183
EL +K A K Q+S G +++V L +L ++FLDEPT G+DP +KR W+LI E
Sbjct: 121 ELVDIKYAADKPVGQMSGGQQQKVSLVASLIHQPDILFLDEPTIGLDPTTKRVLWDLIDE 180
Query: 184 KLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELK------------KRFG 231
L G T+IL SHD+YEVE L D V I+NQG + A +P+ LK K G
Sbjct: 181 -LNSSGHTIILCSHDMYEVELLCDYVGIINQGVLAAFDTPQGLKDTVIKEEESLRAKEIG 239
Query: 232 KTV-RIVLEEP---------IKNFELL---KEELLRVKNVKDVRLARDDSFDVYF----- 273
+ RI E P IK E + KE + + N+ D L+ ++ V
Sbjct: 240 GILDRIDKETPESERRAIQEIKKSERICAGKEISMLIVNLTDDLLSELEALPVTLDVKKH 299
Query: 274 ----------KSLDDSINGILQVISPQELKIKDIFTATANFEDVYLEIIER 314
++ + ++N +L + +I I T + EDV++++ R
Sbjct: 300 HTGRIILELDETCETAVNDVLAAVIRNNARITSISTKDPSLEDVFMKVTGR 350
>pir||T36505 probable ABC-type transport system ATP-binding component -
Streptomyces coelicolor >gi|5457259|emb|CAB46947.1|
(AL096822) putative ABC-transporter ATP-binding
component [Streptomyces coelicolor A3(2)]
Length = 342
Score = 161 bits (402), Expect = 1e-38
Identities = 85/228 (37%), Positives = 136/228 (59%), Gaps = 5/228 (2%)
Query: 4 LEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSGE 63
+E + K F GE AV+ V + +G V G+LGPNGAGKTTT++M+AT+ RPD G
Sbjct: 10 IETAGLVKTF----GETRAVDGVDLAVPAGTVYGVLGPNGAGKTTTVKMLATLLRPDGGH 65
Query: 64 VLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCEDIL 123
V G D V EVR R++ Q + L+ + ++ R G K A++ + +L
Sbjct: 66 ARVFGHDVVHEADEVRGRVSLTGQYASVDEDLTGTENLVLLGRLLGHGKAAARERGDQLL 125
Query: 124 ELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIKE 183
FGL A K+ S G++RR+ +A ++ + L+FLDEPT G+DPRS+ + W++++
Sbjct: 126 AAFGLTDAAAKQVKHYSGGMRRRIDIAASILNTPDLLFLDEPTTGLDPRSRNQVWDIVRA 185
Query: 184 KLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFG 231
+ +G TV+LT+ L E + LA R+ ++++G+++AEG+ ELK G
Sbjct: 186 VVA-QGTTVLLTTQYLDEADQLASRIAVIDKGRVIAEGTKGELKASVG 232
>pir||T50566 probable ABC-type transport protein, ATP-binding component
[imported] - Streptomyces coelicolor
>gi|6469242|emb|CAB61703.1| (AL133220) probable ABC
transporter, ATP-binding component. [Streptomyces
coelicolor A3(2)]
Length = 365
Score = 160 bits (401), Expect = 2e-38
Identities = 86/228 (37%), Positives = 140/228 (60%), Gaps = 4/228 (1%)
Query: 18 GEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSGEVLVDGIDAVKNPLE 77
GE A++ V G V+G+LGPNGAGKTT +R+++T+ PDSG+ V G D V+ P +
Sbjct: 47 GETKALDGVDLDVREGTVMGVLGPNGAGKTTLVRILSTLITPDSGQAHVAGYDVVRQPRQ 106
Query: 78 VRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCEDILELFGLKTHAHKKPF 137
+R+ I Q + L + + R S+RDA+ +++LE F L T A K+P
Sbjct: 107 LRRVIGLTGQYASVDEKLPGWENLYMIGRLLDLSRRDARTRADELLERFSL-TEAGKRPA 165
Query: 138 Q-LSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIKEKLEDKGVTVILTS 196
S G++RR+ LA ++ ++FLDEPT G+DPR++ + W+ +K + D GVTV+LT+
Sbjct: 166 STYSGGMRRRLDLAASMIGHPAVLFLDEPTTGLDPRTRNEVWDEVKRMVGD-GVTVLLTT 224
Query: 197 HDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRF-GKTVRIVLEEPIK 243
+ E E LA + ++++GK++A G +ELK + G+T+RI +P++
Sbjct: 225 QYMEEAEQLASELTVVDRGKVIANGGIEELKAKVGGRTLRIRPADPLQ 272
>gb|AAK42768.1| ABC transporter, ATP binding protein [Sulfolobus solfataricus]
Length = 309
Score = 160 bits (401), Expect = 2e-38
Identities = 94/291 (32%), Positives = 164/291 (56%), Gaps = 17/291 (5%)
Query: 3 ILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSG 62
+++ ++K F E+ AV++VSF ++GPNGAGKTT ++M++T+ P SG
Sbjct: 1 MIKTIDISKTFKIKNKEIKAVDDVSFEIERNSTGALVGPNGAGKTTIIKMLSTLIIPSSG 60
Query: 63 EVLVDGIDAVKNPLEVRKRIAYMTQEPDLTP-PLSVRDYIIYYFRFRGFSKRDAKKHCED 121
+ LV+G K +VR+ I +T L L+ + +I++ + S DA+K ++
Sbjct: 61 DALVNGYSITKEEKKVRESIGLVTVSERLFYYRLTALENLIFFASLQNLSLSDARKRAKE 120
Query: 122 ILELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELI 181
+LE+ GL + + STG++R++ LA AL +D P++ LDEPT G+DP S R +L+
Sbjct: 121 VLEIVGLSEWGNIPYMKFSTGMQRKLALARALITDPPVLLLDEPTLGLDPLSARMFRDLV 180
Query: 182 KEKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFGKTVRI-VLEE 240
+ DK T++LTSH + ++E LA+++I++ +GK +AEG+ LK GK + + V E
Sbjct: 181 RRIGRDK--TILLTSHYMKDIEELAEKIILLKKGKAIAEGNKDNLKNYLGKVIEVEVNEY 238
Query: 241 PI----------KNFELLKEELLRVKNVKDVRLARDDS---FDVYFKSLDD 278
P+ N+ +L+ + +KD R+ +++ DVY + D
Sbjct: 239 PLTLGKYVVQTSTNYYILRIPEKELDELKDYRVIKEEEPSLEDVYIYLIGD 289
>pir||G69803 ABC transporter (ATP-binding protein) homolog yfiL - Bacillus
subtilis >gi|1817536|dbj|BAA11402.1| (D78508) YfiL
[Bacillus subtilis] >gi|2633155|emb|CAB12660.1| (Z99108)
similar to ABC transporter (ATP-binding protein)
[Bacillus subtilis]
Length = 311
Score = 160 bits (400), Expect = 2e-38
Identities = 97/313 (30%), Positives = 165/313 (51%), Gaps = 7/313 (2%)
Query: 3 ILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSG 62
+L+ +++ K + G+ V +SFS GE G+LGPNGAGK+TT+ MI+ + DSG
Sbjct: 1 MLQAENIKKAY----GKKTIVKGISFSLKKGESFGLLGPNGAGKSTTISMISGLVPHDSG 56
Query: 63 EVLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCEDI 122
+ V G K + +++I + QE L P L+ + ++++ + G + +AKK ++
Sbjct: 57 NITVGGYVIGKETAKAKQKIGIVPQEIALYPTLTAHENLMFWGKMYGLTHDEAKKRAAEV 116
Query: 123 LELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIK 182
LE GL A K S G+KRR+ + AL L+ +DEPT G+DP+S+ E +K
Sbjct: 117 LEYVGLTERAKDKIETFSGGMKRRINIGAALMHKPELLIMDEPTVGIDPQSRNHILETVK 176
Query: 183 EKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFGKTVRIVLEEPI 242
+ L + G+TVI TSH + EVE+L DR+ I++QG+++A G+ +L R G I L
Sbjct: 177 Q-LNETGMTVIYTSHYMEEVEFLCDRIGIIDQGEMIAIGTKTDLCSRLGGDTIIQLTVSG 235
Query: 243 KNFELLKEELLRVKNVKDVRLAR-DDSFDVYFKSLDDSINGILQVISPQELKIKDIFTAT 301
N E + + +V DV + + D+ + + +L + + + +
Sbjct: 236 IN-EAFLVAIRSLAHVNDVTVHELELKIDISAAHHEKVVTSLLAEATAHHINLLSLQVQE 294
Query: 302 ANFEDVYLEIIER 314
N E ++L + R
Sbjct: 295 PNLERLFLNLTGR 307
>emb|CAC11998.1| (AL445065) ABC transporter related protein [Thermoplasma
acidophilum]
Length = 334
Score = 159 bits (399), Expect = 3e-38
Identities = 81/227 (35%), Positives = 138/227 (60%), Gaps = 3/227 (1%)
Query: 1 MPILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPD 60
+PI++ +++TK +P G + AV+ ++ E+ G+LG NGAGKTTT++M+ T P
Sbjct: 6 LPIIKTENLTKIYP---GGIKAVDGLNIEIEEAEIYGLLGKNGAGKTTTIKMLTTAIDPT 62
Query: 61 SGEVLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCE 120
SG ++ G D K+ ++R+ I + Q+ L + + F K++A++ +
Sbjct: 63 SGNAIIGGYDLRKDKEKIRRIIGVVPQDLTTDADLKGVENLRMIASFYNIPKQEAEQRIK 122
Query: 121 DILELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWEL 180
D+LE+ L +K Q S G+++R++L C L + ++FLDEPT G+D ++ K W+
Sbjct: 123 DLLEIVDLSDWGNKYVSQYSGGMRKRLELICGLVNSPKILFLDEPTLGLDVNTRSKMWKY 182
Query: 181 IKEKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELK 227
I++ ++ GVT+ILTSH L EV+ LADR+ I++ GKI+ G+P LK
Sbjct: 183 IRDIQKELGVTIILTSHYLEEVDQLADRISIIDHGKILITGTPDSLK 229
>pir||T44443 gliding motility protein [imported] - Flavobacterium johnsoniae
>gi|2281663|gb|AAC19751.1| (AF007381) gliding motility
protein [Flavobacterium johnsoniae]
Length = 298
Score = 159 bits (397), Expect = 5e-38
Identities = 101/308 (32%), Positives = 168/308 (53%), Gaps = 14/308 (4%)
Query: 4 LEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSGE 63
+EV S++K + GE A+N +SF GE++G LGPNGAGK+T ++++ T DSG
Sbjct: 3 IEVNSISKSY----GEQKALNEISFKIEKGEIVGFLGPNGAGKSTLMKILTTYLLADSGS 58
Query: 64 VLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCEDIL 123
LV+G D + N V++ I Y+ + L L VR+Y+ F + K E+++
Sbjct: 59 ALVNGHDVMTNAKAVQQSIGYLPEHNPLYLDLYVREYL----AFNADVYKVPKSRIEEVI 114
Query: 124 ELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIKE 183
+L GL +HKK QLS G ++RV LA AL + ++ LDEPT G+DP + +IK
Sbjct: 115 QLTGLTPESHKKISQLSKGYRQRVGLANALLHNPDVLILDEPTTGLDPNQLMEIRNVIKN 174
Query: 184 KLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFGKTVRIVLEEPIK 243
+DK T+ L++H + EVE + DRVII+++G+IVA+ +L V+E
Sbjct: 175 IGKDK--TIFLSTHIMQEVEAICDRVIIIDKGQIVAD---NKLDHLVAADKEQVIEVEF- 228
Query: 244 NFELLKEELLRVKNVKDVRLARDDSFDVYFKSLDDSINGILQVISPQELKIKDIFTATAN 303
++++ ++ L +++N+ + D ++++ F + D I + LK + N
Sbjct: 229 DYQIEEQLLAKLENIASYKNTHDMTWELTFITDKDMRPAIFDFANENGLKTLQLNQKNKN 288
Query: 304 FEDVYLEI 311
E V+ EI
Sbjct: 289 LEAVFREI 296
>pir||S32908 hypothetical protein 4 - Streptomyces antibioticus
>gi|153382|gb|AAA26793.1| (L06249) ATP-binding protein
[Streptomyces antibioticus]
Length = 325
Score = 157 bits (394), Expect = 1e-37
Identities = 86/296 (29%), Positives = 165/296 (55%), Gaps = 3/296 (1%)
Query: 18 GEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSGEVLVDGIDAVKNPLE 77
GE A++ V G V+G+LGPNGAGKTT +R+++T+ PDSG+ V G D V+ P +
Sbjct: 11 GETKALDGVDLDVREGTVMGVLGPNGAGKTTLVRILSTLITPDSGQATVAGYDVVRQPRQ 70
Query: 78 VRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCEDILELFGLKTHAHKKPF 137
+R+ I Q + L + + R S+++A+ +++LE F L A +
Sbjct: 71 LRRVIGLTGQYASVDEKLPGWENLYLIGRLLDLSRKEARARADELLERFSLTEAARRPAG 130
Query: 138 QLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIKEKLEDKGVTVILTSH 197
S G++RR+ LA ++ +++LDEPT G+DPR++ + W+ +K + D GVTV+LT+
Sbjct: 131 TYSGGMRRRLDLAASMIGRPAVLYLDEPTTGLDPRTRNEVWDEVKAMVGD-GVTVLLTTQ 189
Query: 198 DLYEVEYLADRVIIMNQGKIVAEGSPKELKKRF-GKTVRIVLEEPIKNFELL-KEELLRV 255
+ E E LA + ++++G+++A+G +ELK R G+T+R+ +P++ L + L +
Sbjct: 190 YMEEAEQLASELTVVDRGRVIAKGGIEELKARVGGRTLRVRPVDPLQLRPLAGMLDELGI 249
Query: 256 KNVKDVRLARDDSFDVYFKSLDDSINGILQVISPQELKIKDIFTATANFEDVYLEI 311
+ + + + D+ + ++ ++ + + + I T + ++V+L +
Sbjct: 250 TGLASTTVDTETGALLVPILSDEQLTAVVGAVTARGITLSSITTELPSLDEVFLSL 305
>dbj|BAB04773.1| (AP001510) transposase (08)/ABC transporter (ATP-binding protein)
[Bacillus halodurans]
Length = 901
Score = 157 bits (393), Expect = 2e-37
Identities = 86/294 (29%), Positives = 158/294 (53%), Gaps = 6/294 (2%)
Query: 23 VNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSGEVLVDGIDAVKNPLEVRKRI 82
V ++ GE++G+LGPNGAGK+TT+ MI+++ +P SG+VL+ G K +R +
Sbjct: 608 VKGINMFIEKGEMVGLLGPNGAGKSTTISMISSLIQPTSGDVLIKGGSIHKQSKAIRSIL 667
Query: 83 AYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCEDILELFGLKTHAHKKPFQLSTG 142
+ QE + L+ R+ + ++ + G + K E L+L GL+ + + S G
Sbjct: 668 GVVPQEIAVYHDLTARENLAFFGKIYGLKGEELKHRMESTLQLVGLEERQNDRVHTFSGG 727
Query: 143 LKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIKEKLEDKGVTVILTSHDLYEV 202
+KRR+ +A AL + L+ +DEPT G+DP+S+ E +K +++ +TVI TSH + EV
Sbjct: 728 MKRRLNIAVALLHEPELIIMDEPTVGIDPQSRSHILETVKTLNQEREMTVIYTSHYMEEV 787
Query: 203 EYLADRVIIMNQGKIVAEGSPKELK--KRFGKTVRIVLEEPIKNFELLKEELLRVKNVKD 260
EYL DR+ IM++G+++A G+ E+K +++++ E F ++ + +VK
Sbjct: 788 EYLCDRLYIMDRGEVIASGTKDEVKGILSSNQSIKLTTEMYSPRFLTALQDHPVISSVK- 846
Query: 261 VRLARDDSFDVYFKSLDDSINGILQVISPQELKIKDIFTATANFEDVYLEIIER 314
+ +F + ++ ++ + + +K I EDV+L + R
Sbjct: 847 ---VMEQTFTIIVPKRENILDDLFMLAKETGTTLKSIDIQAPTLEDVFLHLTGR 897
>dbj|BAA83955.1| (AB024563) YFIL [Bacillus halodurans]
Length = 310
Score = 157 bits (393), Expect = 2e-37
Identities = 86/294 (29%), Positives = 158/294 (53%), Gaps = 6/294 (2%)
Query: 23 VNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSGEVLVDGIDAVKNPLEVRKRI 82
V ++ GE++G+LGPNGAGK+TT+ MI+++ +P SG+VL+ G K +R +
Sbjct: 17 VKGINMFIEKGEMVGLLGPNGAGKSTTISMISSLIQPTSGDVLIKGGSIHKRSKAIRSIL 76
Query: 83 AYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCEDILELFGLKTHAHKKPFQLSTG 142
+ QE + L+ R+ + ++ + G + K E L+L GL+ + + S G
Sbjct: 77 GVVPQEIAVYHDLTARENLAFFGKIYGLKGEELKHRMESTLQLVGLEERQNDRVHTFSGG 136
Query: 143 LKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIKEKLEDKGVTVILTSHDLYEV 202
+KRR+ +A AL + L+ +DEPT G+DP+S+ E +K +++ +TVI TSH + EV
Sbjct: 137 MKRRLNIAVALLHEPELIIMDEPTVGIDPQSRSHILETVKTLNQEREMTVIYTSHYMEEV 196
Query: 203 EYLADRVIIMNQGKIVAEGSPKELK--KRFGKTVRIVLEEPIKNFELLKEELLRVKNVKD 260
EYL DR+ IM++G+++A G+ E+K +++++ E F ++ + +VK
Sbjct: 197 EYLCDRLYIMDRGEVIASGTKDEVKGILSSNQSIKLTTEMYSPRFLTALQDHPVISSVK- 255
Query: 261 VRLARDDSFDVYFKSLDDSINGILQVISPQELKIKDIFTATANFEDVYLEIIER 314
+ +F + ++ ++ + + +K I EDV+L + R
Sbjct: 256 ---VMEQTFTIIVPKRENILDDLFMLAKETGTTLKSIDIQAPTLEDVFLHLTGR 306
>pir||T00826 hypothetical protein T32G6.22 - Arabidopsis thaliana (fragment)
Length = 1246
Score = 157 bits (392), Expect = 2e-37
Identities = 93/245 (37%), Positives = 137/245 (54%), Gaps = 5/245 (2%)
Query: 3 ILEVKSVTKKFPTPK--GEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPD 60
+L ++++ K +P K G +AV +++FS +GE G LG NGAGKTTTL M++ P
Sbjct: 810 MLYLQNLRKVYPGDKHHGPKVAVQSLTFSVQAGECFGFLGTNGAGKTTTLSMLSGEETPT 869
Query: 61 SGEVLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCE 120
SG + G D V +P +R+ I Y Q L L+V++++ Y R +G
Sbjct: 870 SGTAFIFGKDIVASPKAIRQHIGYCPQFDALFEYLTVKEHLELYARIKGVVDHRIDNVVT 929
Query: 121 DILELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWEL 180
+ L F L H+HK F LS G KR++ +A A+ D P+V LDEP+ G+DP +KR W++
Sbjct: 930 EKLVEFDLLKHSHKPSFTLSGGNKRKLSVAIAMIGDPPIVILDEPSTGMDPVAKRFMWDV 989
Query: 181 IKEKLEDKGVT-VILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFGKTVRIVLE 239
I G T VILT+H + E + L R+ IM G++ GSP+ LK R+G + LE
Sbjct: 990 ISRLSTRSGKTAVILTTHSMNEAQALCTRIGIMVGGRLRCIGSPQHLKTRYGN--HLELE 1047
Query: 240 EPIKN 244
P N
Sbjct: 1048 VPFYN 1052
Score = 76.5 bits (185), Expect = 4e-13
Identities = 41/93 (44%), Positives = 58/93 (62%), Gaps = 2/93 (2%)
Query: 139 LSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIKEKLEDKGVTVILTSHD 198
LS G+KR++ L AL + ++ LDEPT+G+DP S R TW+LIK+ KG ++LT+H
Sbjct: 14 LSGGMKRKLSLGIALIGNSKVIILDEPTSGMDPYSMRLTWQLIKK--IKKGRIILLTTHS 71
Query: 199 LYEVEYLADRVIIMNQGKIVAEGSPKELKKRFG 231
+ E E L DR+ IM G + GS LK +G
Sbjct: 72 MDEAEELGDRIGIMANGSLKCCGSSIFLKHHYG 104
>gb|AAC02761.2| (AC002339) putative ABC transporter [Arabidopsis thaliana]
Length = 1816
Score = 157 bits (392), Expect = 2e-37
Identities = 93/245 (37%), Positives = 137/245 (54%), Gaps = 5/245 (2%)
Query: 3 ILEVKSVTKKFPTPK--GEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPD 60
+L ++++ K +P K G +AV +++FS +GE G LG NGAGKTTTL M++ P
Sbjct: 1380 MLYLQNLRKVYPGDKHHGPKVAVQSLTFSVQAGECFGFLGTNGAGKTTTLSMLSGEETPT 1439
Query: 61 SGEVLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCE 120
SG + G D V +P +R+ I Y Q L L+V++++ Y R +G
Sbjct: 1440 SGTAFIFGKDIVASPKAIRQHIGYCPQFDALFEYLTVKEHLELYARIKGVVDHRIDNVVT 1499
Query: 121 DILELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWEL 180
+ L F L H+HK F LS G KR++ +A A+ D P+V LDEP+ G+DP +KR W++
Sbjct: 1500 EKLVEFDLLKHSHKPSFTLSGGNKRKLSVAIAMIGDPPIVILDEPSTGMDPVAKRFMWDV 1559
Query: 181 IKEKLEDKGVT-VILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFGKTVRIVLE 239
I G T VILT+H + E + L R+ IM G++ GSP+ LK R+G + LE
Sbjct: 1560 ISRLSTRSGKTAVILTTHSMNEAQALCTRIGIMVGGRLRCIGSPQHLKTRYGN--HLELE 1617
Query: 240 EPIKN 244
P N
Sbjct: 1618 VPFYN 1622
Score = 143 bits (357), Expect = 3e-33
Identities = 79/228 (34%), Positives = 128/228 (55%), Gaps = 2/228 (0%)
Query: 4 LEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSGE 63
++V+++ K + + +G AVN++ + ++L +LG NGAGK+TT+ M+ + P SG+
Sbjct: 449 IQVRNLHKVYASRRGNCCAVNSLQLTLYENQILSLLGHNGAGKSTTISMLVGLLPPTSGD 508
Query: 64 VLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCEDIL 123
L+ G + N E+RK + Q L P L+VR+++ + +G + K D+
Sbjct: 509 ALILGNSIITNMDEIRKELGVCPQHDILFPELTVREHLEMFAVLKGVEEGSLKSTVVDMA 568
Query: 124 ELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIKE 183
E GL + LS G+KR++ L AL + ++ LDEPT+G+DP S R TW+LIK+
Sbjct: 569 EEVGLSDKINTLVRALSGGMKRKLSLGIALIGNSKVIILDEPTSGMDPYSMRLTWQLIKK 628
Query: 184 KLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFG 231
KG ++LT+H + E E L DR+ IM G + GS LK +G
Sbjct: 629 --IKKGRIILLTTHSMDEAEELGDRIGIMANGSLKCCGSSIFLKHHYG 674
>gb|AAG32068.1|AF317790_1 (AF317790) ATP-binding transporter AviABCI [Streptomyces
viridochromogenes]
Length = 323
Score = 157 bits (392), Expect = 2e-37
Identities = 89/297 (29%), Positives = 155/297 (51%), Gaps = 1/297 (0%)
Query: 18 GEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSGEVLVDGIDAVKNPLE 77
G A++ G V +LGPNGAGKTT +R+++T+ +PD G LV G+D + E
Sbjct: 19 GSETALDGFDLVVPEGTVCALLGPNGAGKTTAVRILSTLLKPDGGRALVAGLDVTREAAE 78
Query: 78 VRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCEDILELFGLKTHAHKKPF 137
VR+ I Q P + L+ R+ + + R +R+A++ E++LE F L A K+
Sbjct: 79 VRRNIGVTGQYPAVEEILTGRENLEMWGRLYHVGRREAQRRTEELLEQFDLTEAADKRLK 138
Query: 138 QLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIKEKLEDKGVTVILTSH 197
S G++RR+ LA + ++FLDEPT G+DPR++ + W++++ +E +G TV+LT+
Sbjct: 139 HYSGGMRRRLDLAAGFFTVPKVLFLDEPTTGLDPRNRNEVWKMVRSMVE-QGTTVLLTTQ 197
Query: 198 DLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFGKTVRIVLEEPIKNFELLKEELLRVKN 257
L E + LAD++ +++ G+ V EG+P+ LK G +V ++ ++ R
Sbjct: 198 YLEEADRLADQISVIDAGRGVVEGTPETLKSLVGGDRIVVTLAATEDLSAAAAQVARFTG 257
Query: 258 VKDVRLARDDSFDVYFKSLDDSINGILQVISPQELKIKDIFTATANFEDVYLEIIER 314
+ A D + + I+Q++ Q + D+ +DV+L R
Sbjct: 258 TEPEVDAEARRIDAPVRDRVGDLVEIVQLLRGQGHGVVDVSLRRPTLDDVFLHATNR 314
>emb|CAA75761.1| (Y15759) ORF1 [Streptomyces rochei]
Length = 363
Score = 156 bits (391), Expect = 3e-37
Identities = 83/228 (36%), Positives = 136/228 (59%), Gaps = 5/228 (2%)
Query: 4 LEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSGE 63
+E + K F GE AV+ V +G V G+LGPNGAGKTTT++++AT+ RPD GE
Sbjct: 7 IETTGLVKVF----GENRAVDGVDLRVPAGTVYGLLGPNGAGKTTTVKVLATLLRPDGGE 62
Query: 64 VLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCEDIL 123
V G D + + VR R++ Q + L+ + ++ R G SK A++ +L
Sbjct: 63 ARVFGRDVLADADAVRGRVSLTGQYASVDEDLTGTENLLLLARLLGHSKPAARERAAQLL 122
Query: 124 ELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIKE 183
+ FGL A ++ S G++RR+ +A ++ + L+FLDEPT G+DPRS+ + W++++
Sbjct: 123 DAFGLSEAAGRQVKSYSGGMRRRIDIAASILNTPDLLFLDEPTTGLDPRSRNQVWDIVRA 182
Query: 184 KLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFG 231
+ +G TV+LT+ L E + LA R+ +++ G+++AEG+ ELK G
Sbjct: 183 VVA-QGTTVLLTTQYLDEADQLASRIAVIDHGRVIAEGTKGELKASVG 229
>pir||C72568 probable ATP-binding transport protein APE1829 - Aeropyrum pernix
(strain K1) >gi|5105519|dbj|BAA80832.1| (AP000062) 345aa
long hypothetical ATP-binding transport protein
[Aeropyrum pernix]
Length = 345
Score = 156 bits (391), Expect = 3e-37
Identities = 93/240 (38%), Positives = 142/240 (58%), Gaps = 7/240 (2%)
Query: 3 ILEVKSVTKKFPTPKGE---VIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRP 59
++E + + K+F + + V A+ VSFS GE+ LGPNGAGKTTT+R+++T+ P
Sbjct: 5 MIEARGLVKRFVSGRIRRRVVEALKGVSFSVYEGEIYSFLGPNGAGKTTTVRILSTLLDP 64
Query: 60 DSGEVLVDGIDAVKNPLEVRKRIAYM-TQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKH 118
D GE V G D VK EVRKRI M + E L+ R+ + Y+ R G + + K
Sbjct: 65 DGGEARVAGFDVVKERWEVRKRIGVMLSVERGFYWKLTGRENLYYFGRIYGIPQGELKSR 124
Query: 119 CEDILELFGL-KTHAHKKPF-QLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRK 176
+++L+L GL KPF ++S G+K R+ LA L D ++ LDEPT G+DP S R
Sbjct: 125 IKEVLDLVGLTDLGGADKPFEEMSLGMKARLGLARVLLKDPEVLILDEPTLGLDPASART 184
Query: 177 TWELIKEKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFGKTVRI 236
+I+ L +G T+ +T+H++ E E ++DRV I+ G+I EG+P ELK+R ++ +
Sbjct: 185 IRGVIR-SLASEGRTIFITTHNMVEAEMISDRVGIIIGGRIAMEGTPDELKRRVFSSINL 243
>pir||T18288 ABC transport protein - slime mold (Dictyostelium discoideum)
(fragment) >gi|1513298|gb|AAB06789.1| (U66526) AbcA
[Dictyostelium discoideum]
Length = 1336
Score = 156 bits (390), Expect = 3e-37
Identities = 86/237 (36%), Positives = 136/237 (57%), Gaps = 5/237 (2%)
Query: 7 KSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSGEVLV 66
KS TK F PK V AV +S S G +LG LG NG GK+TT+ M+ + P +G+ LV
Sbjct: 386 KSYTKLF-RPKKTVHAVKYLSLSVEKGTILGFLGSNGCGKSTTIGMLTGLLEPTAGDALV 444
Query: 67 DGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCEDILELF 126
G + N VR+ + + Q L ++ R+++ + +G ++ + + +L+
Sbjct: 445 YGHSVISNIAAVRRITSVVPQHDILWAEMTAREHLQLFSELKGIPAQERESQIQKVLDQV 504
Query: 127 GLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIKEKLE 186
L ++ S G+KRR+ +A A D ++F+DEPT GVDP SKR +L+K
Sbjct: 505 RLSKISNNLISTYSGGMKRRLSVAIACIGDPKIIFMDEPTTGVDPSSKRHLIDLVKSIKN 564
Query: 187 DKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFGK--TVRIVLEEP 241
DK +ILTSHD++EVE LAD+++IMN+G + G+ +LK ++G+ +V IV + P
Sbjct: 565 DK--VIILTSHDMHEVEILADKIVIMNEGVMACNGNSLQLKSKYGEGYSVNIVAKSP 619
>pir||A75184 ATP-binding transport protein PAB0434 - Pyrococcus abyssi (strain
Orsay) >gi|5458062|emb|CAB49552.1| (AJ248284)
ATP-BINDING TRANSPORT PROTEIN [Pyrococcus abyssi]
Length = 244
Score = 156 bits (390), Expect = 3e-37
Identities = 89/228 (39%), Positives = 136/228 (59%), Gaps = 2/228 (0%)
Query: 18 GEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSGEVLVDGIDAVKNPLE 77
G+V A+ VSF GE+ G++GPNGAGK+TTL+++AT+ P G V G D VK E
Sbjct: 17 GKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEVFGHDVVKEASE 76
Query: 78 VRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCEDILELFGLKTHAHKKPF 137
VRK I+Y+ +E L+ +Y+ + + R A+K + +EL GL + K
Sbjct: 77 VRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIELSGLGERLNDKVS 136
Query: 138 QLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIKEKLEDKGVTVILTSH 197
S G+ RR+ LA AL L LDEPT+G+D + + IKE +GVT +++SH
Sbjct: 137 TYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKE-FSKEGVTFLISSH 195
Query: 198 DLYEVEYLADRVIIMNQGKIVAEGSPKELKKRF-GKTVRIVLEEPIKN 244
++ EVEYL DRV ++++G+I+ G+P+ELK+R+ + + V E +KN
Sbjct: 196 NMLEVEYLCDRVALIHKGRILEVGTPRELKERYNAENLEEVFMEAVKN 243
>pir||T35090 probable ABC transport ATP-binding subunit - Streptomyces
coelicolor >gi|5596806|emb|CAB51453.1| (AL096884)
putative ABC transport ATP-binding subunit [Streptomyces
coelicolor A3(2)]
Length = 324
Score = 155 bits (389), Expect = 5e-37
Identities = 103/321 (32%), Positives = 166/321 (51%), Gaps = 26/321 (8%)
Query: 6 VKSVTKKFPTPKG--------EVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIY 57
V+S+TK +P +G EV A ++V+ GE+ G+LGPNGAGK+T +R + +
Sbjct: 4 VRSLTKTYPAVRGRRGVPAAPEVRATDDVTLDIRRGEIFGLLGPNGAGKSTLVRQLTGLM 63
Query: 58 RPDSGEVLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKK 117
RPD G V + G D V++P + +AY+ QE L+V R RG R A+
Sbjct: 64 RPDGGSVEILGHDIVRHPERAARILAYLGQESSALDELTVSLAAETTGRLRGLEVRRARA 123
Query: 118 HCEDILELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKT 177
+ +LE GL A + +LS G +R A AL + PL+ LDEPT G+DP ++R
Sbjct: 124 ERDAVLEELGLTGLAGRPIKKLSGGQRRLACFAAALVGERPLLVLDEPTTGMDPVARRAV 183
Query: 178 WELIKEKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFGKTVRIV 237
W + + + G TV+L +H++ E E + DRV ++++G+++A +P LK++ VR+
Sbjct: 184 WSAVDRRRAEHGATVLLVTHNVIEAETVLDRVAVLDRGRVIACDTPAGLKEQVAGEVRVD 243
Query: 238 L----EEPIKNFEL--LKEELLRVKNVKDVRLARDDSFDVYFKSLDDSINGILQVISPQE 291
L P+ E+ L++ ++ +RLA +++ V + V
Sbjct: 244 LVWRESAPLNVPEVAALRDRVVESGRRWTLRLAPEEARAV-----------VATVTGGAA 292
Query: 292 LKIKDIFT-ATANFEDVYLEI 311
D FT AT + EDVYL +
Sbjct: 293 FAALDDFTLATPSLEDVYLAL 313
>pir||G71131 probable ATP-binding protein - Pyrococcus horikoshii
>gi|3257230|dbj|BAA29913.1| (AP000003) 312aa long
hypothetical ATP-binding protein [Pyrococcus horikoshii]
Length = 312
Score = 155 bits (389), Expect = 5e-37
Identities = 101/313 (32%), Positives = 173/313 (55%), Gaps = 15/313 (4%)
Query: 3 ILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSG 62
++E ++TK + G AV V+FS N GEV G LGPNGAGKTTT+RM+ + +P SG
Sbjct: 7 VIEAINLTKYY----GNFPAVRGVTFSVNEGEVFGFLGPNGAGKTTTIRMLTGVLKPTSG 62
Query: 63 EVLVDGIDAVKNP--LEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCE 120
+V V G D + P L+ R+R+ + + + L+ + G K + +K
Sbjct: 63 QVRVLGYDMTREPEKLKARQRMGIVPEMANPYIDLTAMQNLKLMGELYGLPKWEIEKRSI 122
Query: 121 DILELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWEL 180
++L+LF L + K S G+++R+ LA A+ +D L FLDEPT+G+D S R ++
Sbjct: 123 ELLKLFELYEKRNIKVRGFSKGMRQRLVLAMAMIADPELYFLDEPTSGLDVISARIIKDI 182
Query: 181 IKEKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFGKTVRI-VLE 239
I+++ + G T+ LT+H++ + L +R+ I+ +GK+VA +P+ LK+ + + + V
Sbjct: 183 IRDE-KKAGKTIFLTTHNMNDANELCERIGIIRKGKLVAIDTPEGLKRLTKEHLSVEVSL 241
Query: 240 EPIKNFELLKEELLRVKNVKDVRLARDDSFDVYFKSLDDSINGILQVISPQELKIKDIFT 299
+P+ + LRV+ + D +Y D ++ I++ ++LKI I T
Sbjct: 242 KPMMFDPSVLSSALRVERL-------GDKVKIYTNDPDKTVKEIVEYAKERKLKIVSIRT 294
Query: 300 ATANFEDVYLEII 312
+ + EDV++EII
Sbjct: 295 LSPSLEDVFVEII 307
>pir||H75157 daunorubicin resistance ATP-binding protein (drra-2) PAB2068 -
Pyrococcus abyssi (strain Orsay)
>gi|5457853|emb|CAB49343.1| (AJ248284) daunorubicin
resistance ATP-binding protein (drrA-2) [Pyrococcus
abyssi]
Length = 318
Score = 155 bits (387), Expect = 8e-37
Identities = 100/324 (30%), Positives = 175/324 (53%), Gaps = 20/324 (6%)
Query: 1 MPILEVKSVTK----KFPTPKGEVI---AVNNVSFSANSGEVLGILGPNGAGKTTTLRMI 53
M +EVK++ K K P P ++ A+ ++F+ GE+ G+LGPNGAGKTTT++++
Sbjct: 1 MKAIEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKIL 60
Query: 54 ATIYRPDSGEVLVDGIDAVKNPLEVRKRIAYMTQ-EPDLTPPLSVRDYIIYYFRFRGFSK 112
T+ P SGE V G D VK E+RKRI + + E L L+ + + Y+ K
Sbjct: 61 TTLLEPTSGEARVLGFDIVKEAREIRKRINLVAEGERTLYWRLTAYENLRYFASIYYVPK 120
Query: 113 RDAKKHCEDILELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPR 172
+ A++ ++L + GL S G+K+R+ +A AL +D ++FLDEPT G+D +
Sbjct: 121 KVAEERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQ 180
Query: 173 SKRKTWELIKEKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFGK 232
S ELIK+ +E++ TV+LT+H ++E E L DR+ I++ G+I+A +P+ LKK K
Sbjct: 181 SAIFVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRIIALDTPEGLKKLVRK 240
Query: 233 TVRIVLEEPIKNFELLKEELLRVKNVKDVRLARDDSFDVYFKSL--DDSINGILQVISPQ 290
++E +KN+ +N + +++ V + ++ I +++ +
Sbjct: 241 DT--IVEVRVKNY--------NGENPFGLAKIKEEGEKVVLRGPLDEEDIPKLVEFLVKN 290
Query: 291 ELKIKDIFTATANFEDVYLEIIER 314
K+ + EDV++++ R
Sbjct: 291 NAKVLSVEVKEPTLEDVFIKLTGR 314
>pir||B71030 probable ATP-binding transport protein - Pyrococcus horikoshii
>gi|3257959|dbj|BAA30642.1| (AP000006) 226aa long
hypothetical ATP-binding transport protein [Pyrococcus
horikoshii]
Length = 226
Score = 154 bits (386), Expect = 1e-36
Identities = 89/224 (39%), Positives = 133/224 (58%), Gaps = 2/224 (0%)
Query: 22 AVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSGEVLVDGIDAVKNPLEVRKR 81
A+ ++FS GE+ G++GPNGAGK+TTL+++AT+ RP G+ V G D VK EVRK
Sbjct: 3 ALRGITFSIEEGEIFGLIGPNGAGKSTTLKILATLLRPTGGKAEVFGFDVVKEADEVRKL 62
Query: 82 IAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCEDILELFGLKTHAHKKPFQLST 141
I+Y+ +E L+ +Y+ + + R A+K + +EL GL K S
Sbjct: 63 ISYLPEEAGAYKRLTGLEYLKFMAKLYAKDSRKAEKMLKLGIELSGLGDRLRDKISTYSK 122
Query: 142 GLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIKEKLEDKGVTVILTSHDLYE 201
G+ RR+ LA AL L LDEPT+G+D + + +I+E +GVT +++SH++ E
Sbjct: 123 GMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRIIRE-FSKEGVTFLISSHNMLE 181
Query: 202 VEYLADRVIIMNQGKIVAEGSPKELK-KRFGKTVRIVLEEPIKN 244
VEYL DRV ++++GKIV GSP ELK K + + V E +KN
Sbjct: 182 VEYLCDRVALIHKGKIVEVGSPHELKEKHKAENLEEVFMEAVKN 225
>pir||C69012 ABC transporter (ATP-binding, daunorubicin resistance) -
Methanobacterium thermoautotrophicum (strain Delta H)
>gi|2622194|gb|AAB85582.1| (AE000880) ABC transporter
(ATP-binding [Methanobacterium thermoautotrophicum]
Length = 312
Score = 154 bits (385), Expect = 1e-36
Identities = 92/312 (29%), Positives = 158/312 (50%), Gaps = 8/312 (2%)
Query: 3 ILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSG 62
I+E + + KK+ E +AV V+ G + G+LGPNGAGKTT + M+ TI RP G
Sbjct: 4 IIETEDIKKKYD----EFLAVKGVNLRVPEGSIYGVLGPNGAGKTTLISMLCTILRPTGG 59
Query: 63 EVLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCEDI 122
V+G D V++ +VR+ I + Q L L+ R+++ + G + + E++
Sbjct: 60 RGTVNGYDIVRDARKVRESIGIVFQSRALDDILTGREHLEMHAALYGVPRDVRDRRIEEV 119
Query: 123 LELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIK 182
LEL L A + S G+KRR+++ L ++FLDEPT G+DP+++ W I+
Sbjct: 120 LELIALGDKADEYVKTYSGGMKRRLEIGRGLIHHPRVLFLDEPTLGLDPQTRESIWRYIE 179
Query: 183 EKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFGKTVRIVLEEPI 242
+ ++ VTV+LT+H + E + L D V IM+ G+I+ SP LK+ G V +
Sbjct: 180 KLNREEDVTVLLTTHYMEEADKLCDEVAIMSHGEIIKADSPGNLKRELGADTITVRVDRA 239
Query: 243 KNFELLKEELLRVKNVKDVRLARDDSFDVYFKSLDDSINGILQVISPQELKIKDIFTATA 302
+ F E+L ++ DD V + ++ + I+ + + ++ +
Sbjct: 240 RGF----HEILEKQDYVKEAYLMDDEVKVLVERGENLVPEIVNLAARNNYYVRAVELEHP 295
Query: 303 NFEDVYLEIIER 314
EDV+++ R
Sbjct: 296 TLEDVFIKYTGR 307
>pir||D72484 probable ATP-binding protein APE2516 - Aeropyrum pernix (strain
K1) >gi|5106221|dbj|BAA81532.1| (AP000064) 323aa long
hypothetical ATP-binding protein [Aeropyrum pernix]
Length = 323
Score = 154 bits (385), Expect = 1e-36
Identities = 99/316 (31%), Positives = 174/316 (54%), Gaps = 11/316 (3%)
Query: 4 LEVKSVTKKF-----PTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYR 58
+E +++ K++ P + A++ V G + +LGPNGAGKTT +++++T+
Sbjct: 5 VEAEALVKEYRMGLLPWRARTIRALDGVDLKVGRGTLFSLLGPNGAGKTTLVKILSTLLL 64
Query: 59 PDSGEVLVDGIDAVKNPLEVRKRIAYMTQ-EPDLTPPLSVRDYIIYYFRFRGFSKRDAKK 117
PDSG V G D V+ VR RI + E L LS D + ++ + G R+AK+
Sbjct: 65 PDSGWARVAGFDVVREANNVRSRIGVVLGGERALYWRLSGWDNLWFFSQLYGIPPREAKR 124
Query: 118 HCEDILELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKT 177
+++LE+ GL+ AH + S G+K+R+ +A L +D ++ LDEPT G+DP++ R+
Sbjct: 125 RVKELLEIVGLEEWAHVRVENYSKGMKQRLHIARGLINDPEVLLLDEPTIGLDPKAAREV 184
Query: 178 WELIKEKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFGKTVRIV 237
+I+ ++ +G TV+LT+H + E E L+DRV I+++G+IVAEG P++LK G V
Sbjct: 185 RSIIR-RIVREGRTVLLTTHYMVEAEELSDRVAIISKGRIVAEGPPEDLKSLVGG--ESV 241
Query: 238 LEEPIKNFELLKEELLRVKNVKDVRLARDDS--FDVYFKSLDDSINGILQVISPQELKIK 295
+E + + + L R+ + RD + F V D I +L ++ I+
Sbjct: 242 IELKVMGGDRVSMLLERLGGRVISVVERDGARVFRVLVSEPDSFIEALLAELTRINASIR 301
Query: 296 DIFTATANFEDVYLEI 311
+ + + EDV++++
Sbjct: 302 GLDVRSPSLEDVFIKL 317
>gb|AAK43268.1| ABC transporter, ATP binding protein related protein [Sulfolobus
solfataricus]
Length = 275
Score = 153 bits (384), Expect = 2e-36
Identities = 92/234 (39%), Positives = 146/234 (62%), Gaps = 8/234 (3%)
Query: 3 ILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSG 62
+LE ++TK + + +A++N++FSAN+ V+ +LG NGAGKTT R+++T P SG
Sbjct: 1 MLETINLTKIY---RDGTVALDNLTFSANT-RVVTLLGRNGAGKTTLTRILSTQLLPTSG 56
Query: 63 EVLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCEDI 122
V+G D VK+ +VRK IA + QE S +++I Y RG S ++A +
Sbjct: 57 IARVEGYDVVKDARKVRKIIASIPQEAKSIGIASPMEHLIMYLTARGLSFKEATEISRSA 116
Query: 123 LELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIK 182
L+ GL K +LS G+KR++ +A AL+S+ LV LDEPT G+DP S+ + W ++K
Sbjct: 117 LKEVGLWEVRDKPSDELSGGMKRKIFVAMALASNAELVLLDEPTTGLDPYSRLEVWSVLK 176
Query: 183 EKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFGKTVRI 236
++ K ++LT+H + E E L+D VI++++GK++A+GS KEL +F VRI
Sbjct: 177 -SIKSK---ILLTTHYMEEAEELSDEVILLHKGKLIAKGSIKELLTKFDNKVRI 226
>pir||A70194 ABC transporter, ATP-binding protein homolog - Lyme disease
spirochete >gi|2688689|gb|AAC67099.1| (AE001175) ABC
transporter, ATP-binding protein [Borrelia burgdorferi]
Length = 309
Score = 153 bits (382), Expect = 3e-36
Identities = 106/318 (33%), Positives = 173/318 (54%), Gaps = 38/318 (11%)
Query: 3 ILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSG 62
++ V+ VTK + G A+ NVSF GEVLGILGPNGAGK+T ++++ + + P G
Sbjct: 1 MINVEKVTKMY----GPFTALFNVSFKVEEGEVLGILGPNGAGKSTLIKILTSFHYPSKG 56
Query: 63 EVLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCEDI 122
V + G D V++ E+ ++I Y+ ++ L P LSV++Y+ + +G K KK + +
Sbjct: 57 NVKIFGKDIVEHSKEILQQIGYVPEKLALYPELSVKEYLKFISEIKGVKK--LKKEIDRV 114
Query: 123 LELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIK 182
+ +F LK K QLS G ++RV +A AL ++ LV LDEPT G+DP + E ++
Sbjct: 115 ISIFKLKEVEDKLISQLSKGFRQRVGIAGALINNPKLVILDEPTNGLDPNQIIEFKEFLR 174
Query: 183 EKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFGKTVRIVL---- 238
E ++ T++ +SH L EVE + R+II+N G IVA+ + + + K K + I L
Sbjct: 175 ELAKES--TILFSSHILSEVESICKRIIIVNNGVIVADDTKENIIKNKLKEIEIELIVSK 232
Query: 239 ----EEPIKN-----FELLKEELLRVKNVKDVRLA--------RDDSFDVYFKSLDDSIN 281
E+ I N F L+K E ++ KD+ ++ +D F K+ N
Sbjct: 233 KSENEKKIFNSKNDIFSLIKLE----EHEKDLNISLKLSQGKTEEDLFSYIVKN-----N 283
Query: 282 GILQVISPQELKIKDIFT 299
IL+ + P+ ++ IF+
Sbjct: 284 IILKAMIPKHESLEKIFS 301
>gb|AAK41395.1| ABC transporter, ATP binding protein [Sulfolobus solfataricus]
Length = 275
Score = 153 bits (382), Expect = 3e-36
Identities = 94/280 (33%), Positives = 161/280 (56%), Gaps = 17/280 (6%)
Query: 1 MPILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPD 60
M ++EV +V K + G++IA +++ GE++ +LGPNGAGKTT ++ I P
Sbjct: 1 MYVIEVNNVWKAY----GKIIANEDITMRVKEGEIVALLGPNGAGKTTLVKQIYGELTPT 56
Query: 61 SGEVLVDGIDAVKNPLE--VRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKH 118
GE+ V G K P + V+K + + QE + L+V D I Y R +G SK + KK
Sbjct: 57 KGEIRVLG----KKPTDRHVKKFLGVIPQECEPYGDLTVWDNIYYMGRLKGASKDEIKKR 112
Query: 119 CEDILELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTW 178
E++LE L++ + LS GLKRR +A AL ++ L+ LDEPT G+DP ++R+ W
Sbjct: 113 GEELLERLDLRSKRNTLARDLSGGLKRRTLIAMALINNPKLLILDEPTTGLDPEARREVW 172
Query: 179 ELIKEKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFGKTVRIVL 238
E++ + +G +++LT+H L E E LAD++ +++ KI+ EG+P ++K++F ++
Sbjct: 173 EILL-NMRKEGQSMLLTTHYLDEAERLADKIYFLSR-KIIVEGTPTQIKEKFADWYEVID 230
Query: 239 EEPIKNFELLKEELLRVKNVKDVRLARDDSFDVYFKSLDD 278
K +++ EE +K + + + F+V SL++
Sbjct: 231 YTNGKVYKVKGEE-----ELKKIIMTINGKFEVRMPSLEE 265
>pir||T36344 probable ABC-type transport system ATP-binding protein -
Streptomyces coelicolor >gi|4808357|emb|CAB42771.1|
(AL049841) putative ABC transporter ATP-binding
component [Streptomyces coelicolor A3(2)]
Length = 315
Score = 152 bits (379), Expect = 7e-36
Identities = 94/309 (30%), Positives = 159/309 (51%), Gaps = 28/309 (9%)
Query: 18 GEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSGEVLVDGIDAVKNPLE 77
G A++ + + G V G+LGPNGAGKTT +R+++T+ RPD+G V V G D V
Sbjct: 18 GSKSALDGLDLTVTRGTVHGVLGPNGAGKTTLVRILSTLLRPDAGRVEVAGHDVVAEAYA 77
Query: 78 VRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCEDILELFGLKTHAHKKPF 137
VR RI + Q L L R + + R R A+ +++L FGL K
Sbjct: 78 VRLRIGLLGQHAALDEELGGRQNLEMFGRLHHLGARGARARADELLVRFGLSDTGRKPVG 137
Query: 138 QLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIKEKLEDKGVTVILTSH 197
S G++RR+ LA +L ++ ++FLDEPT G+DPR + + W+ ++ L G TV+LT+
Sbjct: 138 AYSGGMRRRLDLAASLITEPEVLFLDEPTTGLDPRGRAEVWDSVR-SLVGAGTTVLLTTQ 196
Query: 198 DLYEVEYLADRVIIMNQGKIVAEGSPKELKKRF-GKTVRIVLEE-----------PIKNF 245
L E + LADR+ +++ G++VA+G+ ELK G V +VL + P+
Sbjct: 197 YLEEADQLADRISVVDAGRVVADGTADELKAATGGDRVDVVLRDAGHLGAAVALLPLTGV 256
Query: 246 ELLKEELLRVKNVKDVRLARDDSFDVYFKSLDDSINGILQVISPQELKIKDIFTATANFE 305
+ + L V D R+A +++G+++ + ++ +D+ +
Sbjct: 257 RVDPDRRLLSAPVTD-RMA--------------ALSGVVRALEEAGIEAEDVALRRPTLD 301
Query: 306 DVYLEIIER 314
+V+L + +R
Sbjct: 302 EVFLHLTDR 310
>gi|11498898 ABC transporter, ATP-binding protein [Archaeoglobus fulgidus]
>gi|7445659|pir||C69412 ABC transporter, ATP-binding
protein homolog - Archaeoglobus fulgidus
>gi|2649279|gb|AAB89946.1| (AE001014) ABC transporter,
ATP-binding protein [Archaeoglobus fulgidus]
Length = 303
Score = 152 bits (379), Expect = 7e-36
Identities = 92/294 (31%), Positives = 163/294 (55%), Gaps = 13/294 (4%)
Query: 20 VIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSGEVLVDGIDAVKNPLEVR 79
++A+ + G + G+LGPNGAGKTT + +++TI P GEV + G+DA KN +VR
Sbjct: 21 IVALRGIDLDIEDGVIFGLLGPNGAGKTTLISILSTILIPTKGEVRILGMDAFKNTRKVR 80
Query: 80 KRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCEDILELFGLKTHAHKKPFQL 139
+RI ++ + + V + + +Y G + R + + ++ F L+ H +K+ L
Sbjct: 81 ERIN-ISSGVRMPWGMKVYECLRFYAMCYGITDR---RVVDRVISEFELEEHRNKRFDDL 136
Query: 140 STGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIKEKLEDKGVTVILTSHDL 199
STG K++ LA A +D +VFLDEPTA +DP +K ++I E+K VT++LT+H++
Sbjct: 137 STGNKQKANLARAFLNDPEVVFLDEPTANLDPDMAKKIRQMILRIKEEKDVTIVLTTHNM 196
Query: 200 YEVEYLADRVIIMNQGKIVAEGSPKELKKRFGKTVRIVLEEPIKNFELLKEELLRVKNVK 259
E E L DR+ + +GKIVAEG+ +ELKK + R++L+ LK ++
Sbjct: 197 REAEMLCDRIAFIKEGKIVAEGTSEELKKYTKMSERVILK--------LKGNAKKLHIPY 248
Query: 260 DVRLARDDSFDVYFKSLDDSINGILQVISPQELKIKDIFTATANFEDVYLEIIE 313
R+ ++ + + + ++ I+ ++ Q + ++ EDV++E+ E
Sbjct: 249 PYRM-DGNTLIAFVEDAEKALPSIVVRLAEQGVFVESAKMEEITLEDVFIELAE 301
>sp|P54592|YHCH_BACSU HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PROTEIN 2 IN GLPD-CSPB
INTERGENIC REGION >gi|7445695|pir||D69822 ABC
transporter (ATP-binding protein) homolog yhcH -
Bacillus subtilis >gi|1239983|emb|CAA65691.1| (X96983)
hypothetical protein [Bacillus subtilis]
>gi|2633231|emb|CAB12736.1| (Z99108) similar to ABC
transporter (ATP-binding protein) [Bacillus subtilis]
Length = 305
Score = 150 bits (376), Expect = 2e-35
Identities = 94/310 (30%), Positives = 171/310 (54%), Gaps = 20/310 (6%)
Query: 3 ILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSG 62
+LE+K+VTK +G I ++++SF+ GEV G LGPNGAGKTTT+RM+ + + G
Sbjct: 4 VLELKNVTKNI---RGRTI-IDDLSFTIREGEVFGFLGPNGAGKTTTIRMMVGLMKLSKG 59
Query: 63 EVLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCEDI 122
+VL+ G K + K I + + P+L LS + + R K K+ +++
Sbjct: 60 DVLICGQSITKEYAKAIKHIGAIVENPELYKFLSGYKNLQQFARM---VKGVTKEKIDEV 116
Query: 123 LELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIK 182
+EL GL H K S G+++R+ LA L D ++ LDEPT G+DP R+ + +K
Sbjct: 117 VELVGLTDRIHDKVKTYSLGMRQRLGLAQCLLHDPKVLILDEPTNGLDPAGIREIRDHLK 176
Query: 183 EKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFGKTVRIVLEEPI 242
+ ++G+ VI++SH L E+E + DR+ I+ +GK++ + K+ T +E+P
Sbjct: 177 KLTRERGMAVIVSSHLLSEMELMCDRIAILQKGKLIDIQNVKDENIDENDTYFFQVEQPS 236
Query: 243 KNFELLKE-ELLRVKNVKDVRLARDDSFDVYFKSLDDSINGILQVISPQELKIKDIFTAT 301
+ +L + +LL N +++LA+++ + +++++ Q+++I ++ T
Sbjct: 237 EAATVLNQYDLLSKTNGVEIKLAKEE------------VPAVIELLVMQQIRIYEVKVIT 284
Query: 302 ANFEDVYLEI 311
+ ED +LE+
Sbjct: 285 KSLEDRFLEM 294
>gb|AAK42130.1| Antibiotic ABC transporter ATP binding protein [Sulfolobus
solfataricus]
Length = 297
Score = 150 bits (375), Expect = 2e-35
Identities = 94/310 (30%), Positives = 170/310 (54%), Gaps = 16/310 (5%)
Query: 3 ILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSG 62
++ V S+ KK+ G IA++N+S GE + ++GPNGAGKTT +R++ T+ +PD G
Sbjct: 1 MIVVSSIVKKY----GNKIALDNISLEVKKGEFVSLIGPNGAGKTTLIRILLTLMKPDKG 56
Query: 63 EVLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCEDI 122
EV + G + +N + K I Y+ + P+ P L+ R + + RG K + K+ +
Sbjct: 57 EVQILGENPFRNK-RIFKAIGYVQEIPNYPPFLTGRQVLELSAKIRGVDKSEVKR----V 111
Query: 123 LELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIK 182
LE ++ +A+ + S G+ +R+ +A +L + ++ +DEP G+DP KT EL+
Sbjct: 112 LEFVEMENYANSPIIKYSKGMVQRIAIAESLLGNPSILIMDEPNMGIDPIFSLKTRELLN 171
Query: 183 EKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFGKTVRIVLEEPI 242
+ V++++TSH+L +V+ L+DR+ ++ +GKIV G+ +++ K F IV + I
Sbjct: 172 KLKRKDNVSILMTSHELEDVKKLSDRIFMIYKGKIVFSGTVEDMIKEFLGIQVIVETDEI 231
Query: 243 KNFELLKEELLRVKNVKDVRLARDDSFDVYFKSLDDSINGILQVISPQELKIKDIFTATA 302
+N E E L ++ VK V +D + K +D +L+ + +K+K F
Sbjct: 232 ENAE---EALKGIEYVKGV---FNDGNRLIVKLNEDRREDLLRDLVTSGVKVKG-FYIDL 284
Query: 303 NFEDVYLEII 312
N E+ Y+ +
Sbjct: 285 NLEEAYMRAL 294
>gi|11498736 ABC transporter, ATP-binding protein [Archaeoglobus fulgidus]
>gi|7445762|pir||G69391 ABC transporter, ATP-binding
protein homolog - Archaeoglobus fulgidus
>gi|2649451|gb|AAB90107.1| (AE001025) ABC transporter,
ATP-binding protein [Archaeoglobus fulgidus]
Length = 294
Score = 150 bits (375), Expect = 2e-35
Identities = 103/313 (32%), Positives = 163/313 (51%), Gaps = 22/313 (7%)
Query: 1 MPILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPD 60
M +EV+++TK F + A++ +S GE+ G LGPNGAGKTTT+ + +P
Sbjct: 1 MAQIEVENLTKVFNGFR----ALDGISLVVERGEIFGFLGPNGAGKTTTINCCLGLIKPT 56
Query: 61 SGEVLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCE 120
SG V + G+D + P+EV++ Y+ + P L+ R ++Y+ F + K + +
Sbjct: 57 SGSVRIAGMDVEEKPVEVKEICGYLPENYGFYPNLTARQNLLYFSEFYA----NPKDNVD 112
Query: 121 DILELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWEL 180
++L L GL+ A KK + S G+K+R+ LA AL +D +VFLDEPT G+DP+ ++
Sbjct: 113 ELLALVGLQDSADKKVGEFSRGMKQRLALAQALINDPEVVFLDEPTNGLDPQGIADFRKI 172
Query: 181 IKEKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFGKTVRIVLEE 240
I+E L KG T +SH L EV + V I+N+G+IV G EL G +V E
Sbjct: 173 IRE-LNQKGKTFFFSSHILSEVREVCSVVGIINRGRIVKVGKISELS---GSMEVVVQTE 228
Query: 241 PIKNFELLKEELLRVKNVKDVRLARDDSFDVY-FKSLDDSINGILQVISPQELKIKDIFT 299
P + LL+E + D+S DVY K D I + + +K++
Sbjct: 229 PRADESLLRE---------FGEVEYDESRDVYVIKVESDCRVEISRTLFEHGFVVKELSL 279
Query: 300 ATANFEDVYLEII 312
+ E +YL ++
Sbjct: 280 REPSLEKIYLSMV 292
>pir||E72364 ABC transporter, ATP-binding protein - Thermotoga maritima (strain
MSB8) >gi|4981058|gb|AAD35629.1|AE001729_9 (AE001729)
ABC transporter, ATP-binding protein [Thermotoga
maritima]
Length = 244
Score = 150 bits (374), Expect = 3e-35
Identities = 84/244 (34%), Positives = 145/244 (59%), Gaps = 6/244 (2%)
Query: 1 MPILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPD 60
M + VK + K+ G+ + +SF GE+ G++GPNGAGKTTTLR+I+T+ +P
Sbjct: 1 MGAVVVKDLRKRI----GKKEILKGISFEIEEGEIFGLIGPNGAGKTTTLRIISTLIKPS 56
Query: 61 SGEVLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCE 120
SG V V G + V+ P EVRK I+Y+ +E + +Y+ + F S + ++ E
Sbjct: 57 SGIVTVFGKNVVEEPHEVRKLISYLPEEAGAYRNMQGIEYLRFVAGFYASSSSEIEEMVE 116
Query: 121 DILELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWEL 180
E+ GL + S G+ R++ +A AL + L LDEPT+G+D + R+ ++
Sbjct: 117 RATEIAGLGEKIKDRVSTYSKGMVRKLLIARALMVNPRLAILDEPTSGLDVLNAREVRKI 176
Query: 181 IKEKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRF-GKTVRIVLE 239
+K+ ++ G+T++++SH++ EVE+L DR+ +++ G IV G+ +ELK+R+ + + V E
Sbjct: 177 LKQASQE-GLTILVSSHNMLEVEFLCDRIALIHNGTIVETGTVEELKERYKAQNIEEVFE 235
Query: 240 EPIK 243
E +K
Sbjct: 236 EVVK 239
>sp|P72335|NODI_RHIS3 NODULATION ATP-BINDING PROTEIN I >gi|1531621|gb|AAB16898.1|
(U53327) NodI [Rhizobium sp. N33]
Length = 304
Score = 149 bits (372), Expect = 4e-35
Identities = 84/223 (37%), Positives = 131/223 (58%), Gaps = 5/223 (2%)
Query: 4 LEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSGE 63
+++ V K F G+ + VN +SF+ SGE G+LGPNGAGK+T RM+ + PD+G+
Sbjct: 6 IDLAGVKKSF----GDKLVVNGLSFTVASGECFGLLGPNGAGKSTIARMLLGMTVPDAGK 61
Query: 64 VLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCEDIL 123
+ V G RK I + Q +L +VR+ ++ + R+ G S R K+ +L
Sbjct: 62 ITVLGEPVGARSRLARKSIGVVPQFDNLDQEFTVRENLLVFGRYFGMSTRKIKEVIPSLL 121
Query: 124 ELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIKE 183
E L++ A + +LS G+KRR+ LA AL +D L+ +DEPT G+DP ++ WE ++
Sbjct: 122 EFARLESKADARVGELSGGMKRRLTLARALINDPQLLVMDEPTTGLDPHARHLIWERLRF 181
Query: 184 KLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKEL 226
L +G T+ILT+H + E E L DR+ ++ G+ +AEGSP L
Sbjct: 182 LLA-RGKTIILTTHFMEEAERLCDRLCVLEHGRKLAEGSPHAL 223
>emb|CAB76006.1| (AL157916) putative ABC transporter, ATP-binding subunit
[Streptomyces coelicolor A3(2)]
Length = 312
Score = 148 bits (371), Expect = 6e-35
Identities = 99/315 (31%), Positives = 164/315 (51%), Gaps = 20/315 (6%)
Query: 1 MPILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPD 60
MP++EV + K + G V+ VSF+ GE+ G+LGPNGAGKTTT+ + + PD
Sbjct: 13 MPVIEVTDLRKSY----GGRPVVDGVSFAVEEGEIFGVLGPNGAGKTTTVECVEGLRVPD 68
Query: 61 SGEVLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCE 120
+G V V G+D V + V + + Q+ +L P L+VR+ + Y F + K +
Sbjct: 69 AGRVRVTGLDPVADHRRVAEVLGAQLQQSELQPKLTVREALELYAAF--YPKPADWRPLA 126
Query: 121 DILELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWEL 180
+ L+L + K LS G K+R+ +A AL D +V LDE T G+DPR++R+TW+L
Sbjct: 127 ERLDLVPMLDTRFAK---LSGGQKQRLFIALALVGDPRVVVLDELTTGLDPRARRETWQL 183
Query: 181 IKEKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKR-FGKTV-RIVL 238
I E + GVTV+L +H + E + L DR+ ++++G+I A +P L +R G TV
Sbjct: 184 I-EDIRAGGVTVLLVTHFMEEAQRLCDRIAVIDRGRIAALDTPAGLIRRSTGATVISFTP 242
Query: 239 EEPIKNFELLKEELLRVKNVKDVRLARDDSFDVYFKSLDDSINGILQVISPQELKIKDIF 298
P+ +L L +D R V D+++N ++ +++ + +
Sbjct: 243 SAPLDEADLRALPELASAEFRDGR--------VTLSGTDETVNAVITLLARTRVTAHQLR 294
Query: 299 TATANFEDVYLEIIE 313
+D +L++ E
Sbjct: 295 VTDTTLDDAFLDLTE 309
>pir||E75564 ABC transporter, ATP-binding protein - Deinococcus radiodurans
(strain R1) >gi|6457722|gb|AAF09652.1|AE001869_1
(AE001869) ABC transporter, ATP-binding protein
[Deinococcus radiodurans]
Length = 328
Score = 148 bits (369), Expect = 1e-34
Identities = 89/228 (39%), Positives = 128/228 (56%), Gaps = 5/228 (2%)
Query: 2 PILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDS 61
P L ++ ++K F G V AV +VS +GE L +LGP+G GK+T LR +A + RPD+
Sbjct: 6 PALSLRGLSKAF----GAVQAVGDVSLEVQAGETLALLGPSGCGKSTVLRSVAGLERPDA 61
Query: 62 GEVLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCED 121
G+VLV G D P E R + + Q+ L P LSV D + Y R RG S+ DA + +
Sbjct: 62 GQVLVGGRDVTALPPEAR-HLGLVFQDYALFPHLSVLDNVAYGPRRRGSSRPDAAQQARE 120
Query: 122 ILELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELI 181
L L GL H + P QLS G ++RV LA AL++ PL+ LDEP + +D + + + +
Sbjct: 121 ALALVGLSEHERRLPAQLSGGQQQRVALARALATRSPLLLLDEPLSNLDEKLRSELRHDL 180
Query: 182 KEKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKR 229
+ G V+L +HD E LA RV +M G +V EG+ +L R
Sbjct: 181 RGLFGQLGAGVLLVTHDQREALALAHRVAVMRAGHVVQEGAAADLFAR 228
>sp|P23703|NODI_RHILO NODULATION ATP-BINDING PROTEIN I >gi|95215|pir||S13590 nodulation
protein nodI - Rhizobium meliloti
>gi|581510|emb|CAA39236.1| (X55705) nodulation gene;
integral membrane protein; homology to Rhizobium
leguminosarum nodI [Mesorhizobium loti]
Length = 339
Score = 147 bits (368), Expect = 1e-34
Identities = 81/223 (36%), Positives = 131/223 (58%), Gaps = 5/223 (2%)
Query: 4 LEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSGE 63
++ VTK + G I V+ +SFS SGE G+LGPNGAGK+T RM+ + PD+G
Sbjct: 41 VDFAGVTKSY----GNKIVVDELSFSVASGECFGLLGPNGAGKSTIARMLLGMTCPDAGA 96
Query: 64 VLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCEDIL 123
+ V G+ R+ I + Q +L L+VR+ ++ + R+ G S R ++ +L
Sbjct: 97 ITVLGVPVPARARLARRGIGVVPQFDNLDQELTVRENLLVFGRYFGMSTRQSEAVIPSLL 156
Query: 124 ELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIKE 183
E L+ A+ + +LS G+KR + +A AL +D L+ +DEPT G+DP ++ WE ++
Sbjct: 157 EFARLERKANARVSELSGGMKRCLTMARALINDPQLIVMDEPTTGLDPHARHLIWERLRA 216
Query: 184 KLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKEL 226
L +G T+ILT+H + E E L DR+ ++ +G+ +AEG P+ L
Sbjct: 217 LLA-RGKTIILTTHFMEEAERLCDRLCVLEKGRNIAEGGPQAL 258
>gb|AAF49304.2| (AE003522) NUCB1 gene product [Drosophila melanogaster]
Length = 1981
Score = 146 bits (366), Expect = 2e-34
Identities = 82/235 (34%), Positives = 125/235 (52%), Gaps = 5/235 (2%)
Query: 4 LEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSGE 63
L V V+KK+ + +AVNN+SF+ +G+LGPNGAGKTTT +MI + D G
Sbjct: 1568 LVVNGVSKKYGCDQ---LAVNNISFALKPSHCVGLLGPNGAGKTTTFKMIVGEHSIDKGN 1624
Query: 64 VLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCEDIL 123
+ + G + K + Y Q L+ R + + GF +D K CE +
Sbjct: 1625 IYISGYSMRMKRNKAMKELGYCPQSDSFFEFLTGRQLLKVFLLIWGFPSKDLNKRCEKLA 1684
Query: 124 ELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIKE 183
+ FG + H KK S G KR++ A A ++ L+ LDEP+AGVDP S+R W +I E
Sbjct: 1685 DQFGFRKHLDKKITYYSGGTKRKINAAVACGAN-SLICLDEPSAGVDPASRRHVWTIINE 1743
Query: 184 KLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFGKTVRIVL 238
+ +G V+LTSH++ E+ L + +I+ G I A GS + +K + K + + L
Sbjct: 1744 -VAQQGKAVLLTSHNMDEINALCSKSVILVDGSIYAMGSVQHVKNKIAKGMTLKL 1797
Score = 135 bits (337), Expect = 6e-31
Identities = 91/310 (29%), Positives = 158/310 (50%), Gaps = 22/310 (7%)
Query: 4 LEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSGE 63
++++ ++K F G++ V NVSF G++ ++G NGAGKTT + M+A P SG
Sbjct: 857 VQIRGLSKTF----GKMEVVKNVSFDMFEGQITVLMGHNGAGKTTLISMLAGFISPTSGT 912
Query: 64 VLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCEDIL 123
L++G D + + ++ I Q+ L LS +I + R RG + K ++ L
Sbjct: 913 ALINGFDIRQERRQAQRCIGLCPQQNVLFKHLSSVSHIQLFSRLRGLRGAEVKSEVQNYL 972
Query: 124 ELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIKE 183
+ L+ LS G +RR+ +AC+L V ++ DEP+ G+DP ++R+ W LI E
Sbjct: 973 KKLNLQEKKRLAARNLSGGTQRRLSVACSLCGGVKVLICDEPSTGLDPSARRELWRLILE 1032
Query: 184 KLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFGKTVRIVLEEPIK 243
E G T++LT+H L + E L DRV+I++ G++ GS LKK+ + I E K
Sbjct: 1033 AKE--GCTILLTTHQLDDGEVLGDRVVIISDGQLRCIGSLPFLKKQVDASCLITCEAR-K 1089
Query: 244 NFELLKEELLRVKNVKDVR--------------LARDDSFDVYFKSLDDSINGI-LQVIS 288
+L K L ++V ++ L++ F F+ L+ +N + ++ S
Sbjct: 1090 RCDLEKLTSLISRHVGTIQPFSIKGRDVCYKLPLSKSKYFSSLFRDLESQMNILGVRGFS 1149
Query: 289 PQELKIKDIF 298
+ +++IF
Sbjct: 1150 LSSVSLEEIF 1159
>gb|AAG35594.1|AF200948_1 (AF200948) ABC1 transporter [Leishmania tropica]
Length = 1843
Score = 146 bits (366), Expect = 2e-34
Identities = 100/320 (31%), Positives = 159/320 (49%), Gaps = 17/320 (5%)
Query: 3 ILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSG 62
++ V ++ K++P K +AV N++ GEV G LG NGAGKTTT+ ++ + P SG
Sbjct: 1504 LVRVLNLRKEYPNGK---VAVRNIALGVRPGEVFGFLGTNGAGKTTTISILCQEFYPTSG 1560
Query: 63 EVLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCEDI 122
V G D V E + I Y Q L+V +++ Y RG S R + +
Sbjct: 1561 RAYVCGNDIVTESSEALRCIGYCPQFDACLDLLTVEEHLYLYAGVRGISSRACDRVVRGL 1620
Query: 123 LELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIK 182
++L GL + K +LS G +R++ +A +L +VF DEP+AG+DP ++R W I+
Sbjct: 1621 MKLCGLTEYRRTKSHELSGGNRRKLSVAVSLIGGPRVVFFDEPSAGMDPVARRGLWNAIE 1680
Query: 183 EKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFGK----TVRIVL 238
++ +V+LT+H L EVE LA RV IM G + G LK+++G VR+
Sbjct: 1681 TVADN--CSVVLTTHHLEEVEALAHRVAIMVDGTLRCIGDKTHLKQKYGTGFEVAVRVAD 1738
Query: 239 EEP--IKNFELLKEELLRVKNVKDVRLARDDSFDVYFKSLDDSINGILQVISPQ--ELKI 294
E P + EL EE + +VR R Y ++ + + Q +L+I
Sbjct: 1739 ESPEVMAGVELFFEEEFPSSKLTEVRAGR----FTYQLPSTVRLSSVFTALEQQKEKLQI 1794
Query: 295 KDIFTATANFEDVYLEIIER 314
D + + E V++ I E+
Sbjct: 1795 CDYSVSQTSIEQVFMRISEK 1814
Score = 127 bits (317), Expect = 1e-28
Identities = 76/228 (33%), Positives = 119/228 (51%), Gaps = 2/228 (0%)
Query: 4 LEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSGE 63
+ ++ + K F AV+++ +S N GE+ +LG NGAGK+TT+ ++ + D G+
Sbjct: 718 VRIRGLRKTFRRGGKAFAAVDDLCWSLNEGEISVLLGHNGAGKSTTMNLMTGMLEADGGD 777
Query: 64 VLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCEDIL 123
V G VR+ I Q L P L+VR+++ YY +G + + +L
Sbjct: 778 CYVYGHSVRHELSAVRQEIGLCPQHNILWPQLTVREHLDYYAAIKGLRGSEKEDAIRRLL 837
Query: 124 ELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIKE 183
L+ H LS G KR++ +A A LV LDEPTAG+D ++R TW L+KE
Sbjct: 838 AAVDLEDKEHYMSKALSGGQKRKLSVAVAFVGGSRLVILDEPTAGMDVGARRHTWSLLKE 897
Query: 184 KLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFG 231
K T++LT+H + E + L D V IM++G++ GS LK + G
Sbjct: 898 MA--KWHTILLTTHFMDEADLLGDTVAIMSKGRLQCAGSNMFLKSKLG 943
>emb|CAC11868.1| (AL445065) ATP-binding protein related resistance protein
[Thermoplasma acidophilum]
Length = 319
Score = 146 bits (366), Expect = 2e-34
Identities = 84/261 (32%), Positives = 148/261 (56%), Gaps = 7/261 (2%)
Query: 3 ILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSG 62
+LEV++++K +P G V N S G + +LG NGAGK+TT++ I + PDS
Sbjct: 6 LLEVRNLSKIYPGGSG----VRNASIKIRYGSIHALLGNNGAGKSTTMKCITGLLEPDSI 61
Query: 63 EVLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCEDI 122
E+ G N +++K I Y+ + P +V D I+ Y R G K +A I
Sbjct: 62 EISFRGTTYPWNSKDLKKHIGYVPELPAFPKVFTVHDCIVSYGRMMGLGKAEAVGRAMPI 121
Query: 123 LELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIK 182
+ + GL+ H K+ LS G+ +++ + AL SD ++ +DEPTAG+D + + + +I+
Sbjct: 122 VSILGLEEHMKKRVSSLSRGMLQKLDIVIALLSDPDVIIMDEPTAGLDVSAVEELFGIIR 181
Query: 183 EKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFGKTVRIVLEEPI 242
L D+G +++++SH L ++E ++D V +M+ G ++ +GS K+L G +V +V E
Sbjct: 182 -SLRDRGKSILISSHQLRDIETISDSVTVMDSGHVIFDGSIKDLYASAG-SVEVVAEFSR 239
Query: 243 KNFELLKEELLRVKNVKDVRL 263
+ +L+ E + R++ V DVR+
Sbjct: 240 IDGKLM-ETIKRMQGVMDVRM 259
>pir||S76626 ABC-type transport protein sll0489 - Synechocystis sp. (strain PCC
6803) >gi|1001733|dbj|BAA10570.1| (D64004) ABC
transporter [Synechocystis sp.]
Length = 342
Score = 146 bits (366), Expect = 2e-34
Identities = 100/316 (31%), Positives = 158/316 (49%), Gaps = 12/316 (3%)
Query: 3 ILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSG 62
++EV+ ++K + G A+ NV FS GE+LG LGPNGAGKTTT+R++A +G
Sbjct: 1 MIEVEHLSKVY----GSTTAIQNVDFSVQKGEILGFLGPNGAGKTTTMRILAGYIPATTG 56
Query: 63 EVLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCEDI 122
V V G D + L VRKRI Y+ + P L ++V ++ + +G D ++
Sbjct: 57 TVRVAGFDVHEQSLAVRKRIGYLPENPPLYGDMTVASFLNFVASIKGVKPGDRRQRVIWA 116
Query: 123 LELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIK 182
+E L +LS G K+RV +A A+ D ++ LDEPT G+DP+ + LIK
Sbjct: 117 MERCQLTEKRKVLIRKLSKGFKQRVGIAQAIVHDPAVIILDEPTVGLDPKQIIEVRNLIK 176
Query: 183 EKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFGKTVRIVLEEPI 242
ED T+IL++H L EV DRV I+NQG++VA +P L + LE
Sbjct: 177 SLAEDH--TIILSTHILPEVSMTCDRVTIINQGRVVATNTPDNLLAELKGNLSYQLEVAG 234
Query: 243 KNFELLKEELLRVKNVKDVRL----ARDDSFDVYFKS--LDDSINGILQVISPQELKIKD 296
+ L + V++V+ + + + +S L++ + Q I Q + +
Sbjct: 235 AEGMAIAHCLQSLPGVEEVQTKTHPQQQERQQILVRSNQLEELGQQLAQAIVTQGWDLYE 294
Query: 297 IFTATANFEDVYLEII 312
+ EDV+L +I
Sbjct: 295 MQRLRPTLEDVFLNLI 310
>pir||C72303 ABC transporter, ATP-binding protein - Thermotoga maritima (strain
MSB8) >gi|4981569|gb|AAD36105.1|AE001764_8 (AE001764)
ABC transporter, ATP-binding protein [Thermotoga
maritima]
Length = 293
Score = 146 bits (366), Expect = 2e-34
Identities = 95/309 (30%), Positives = 167/309 (53%), Gaps = 24/309 (7%)
Query: 1 MPILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPD 60
M ++EV+ +TK + +G V V+FS GE+ G +GPNGAGKTTT+R++ + PD
Sbjct: 1 MSVVEVRDLTKYYGKSRG----VEGVTFSVEEGEIFGFIGPNGAGKTTTIRLLLGLIFPD 56
Query: 61 SGEVLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCE 120
SG + G D +K E+RK + Y+ E P ++V +++ Y F + K D + +
Sbjct: 57 SGLAEIFGKDVLKEGKEIRKNVGYIPGEVSFYPEVTVEEFLRYSASF--YEKVD-WDYVK 113
Query: 121 DILELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWEL 180
++ +F L T K+ +LS G K++V + AL L+ LDEPT G+DP + +E+
Sbjct: 114 ELCGVFSLDT--KKRIKELSMGNKKKVAIVQALMHRPKLLILDEPTNGLDPIVQNTFFEI 171
Query: 181 IKEKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFGKTVRIVLEE 240
+K + ++KG TV +SH L EVE L DRV ++ G+I+ + LK K VR+
Sbjct: 172 LKNE-KEKGTTVFFSSHILSEVERLCDRVAMIKDGRIIRVEKVENLKGERYKVVRV---- 226
Query: 241 PIKNFELLKEELLRVKNVKDVRLARDDSFDVYFKSLDDSINGILQVISPQELKIKDIFTA 300
E L ++K++ +V + ++ F ++ +L+++ + LK+ D +
Sbjct: 227 -------KGENLEKLKDLAEVNRLKFENGTAEF-LFSGNVERLLEIL--RSLKLSDFWVE 276
Query: 301 TANFEDVYL 309
+ E++++
Sbjct: 277 EPSLEEIFM 285
>gb|AAF49305.1| (AE003522) CG5944 gene product [Drosophila melanogaster]
Length = 1463
Score = 146 bits (366), Expect = 2e-34
Identities = 82/235 (34%), Positives = 125/235 (52%), Gaps = 5/235 (2%)
Query: 4 LEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSGE 63
L V V+KK+ + +AVNN+SF+ +G+LGPNGAGKTTT +MI + D G
Sbjct: 1050 LVVNGVSKKYGCDQ---LAVNNISFALKPSHCVGLLGPNGAGKTTTFKMIVGEHSIDKGN 1106
Query: 64 VLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCEDIL 123
+ + G + K + Y Q L+ R + + GF +D K CE +
Sbjct: 1107 IYISGYSMRMKRNKAMKELGYCPQSDSFFEFLTGRQLLKVFLLIWGFPSKDLNKRCEKLA 1166
Query: 124 ELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIKE 183
+ FG + H KK S G KR++ A A ++ L+ LDEP+AGVDP S+R W +I E
Sbjct: 1167 DQFGFRKHLDKKITYYSGGTKRKINAAVACGAN-SLICLDEPSAGVDPASRRHVWTIINE 1225
Query: 184 KLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFGKTVRIVL 238
+ +G V+LTSH++ E+ L + +I+ G I A GS + +K + K + + L
Sbjct: 1226 -VAQQGKAVLLTSHNMDEINALCSKSVILVDGSIYAMGSVQHVKNKIAKGMTLKL 1279
Score = 135 bits (337), Expect = 6e-31
Identities = 91/310 (29%), Positives = 158/310 (50%), Gaps = 22/310 (7%)
Query: 4 LEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSGE 63
++++ ++K F G++ V NVSF G++ ++G NGAGKTT + M+A P SG
Sbjct: 339 VQIRGLSKTF----GKMEVVKNVSFDMFEGQITVLMGHNGAGKTTLISMLAGFISPTSGT 394
Query: 64 VLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCEDIL 123
L++G D + + ++ I Q+ L LS +I + R RG + K ++ L
Sbjct: 395 ALINGFDIRQERRQAQRCIGLCPQQNVLFKHLSSVSHIQLFSRLRGLRGAEVKSEVQNYL 454
Query: 124 ELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIKE 183
+ L+ LS G +RR+ +AC+L V ++ DEP+ G+DP ++R+ W LI E
Sbjct: 455 KKLNLQEKKRLAARNLSGGTQRRLSVACSLCGGVKVLICDEPSTGLDPSARRELWRLILE 514
Query: 184 KLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFGKTVRIVLEEPIK 243
E G T++LT+H L + E L DRV+I++ G++ GS LKK+ + I E K
Sbjct: 515 AKE--GCTILLTTHQLDDGEVLGDRVVIISDGQLRCIGSLPFLKKQVDASCLITCEAR-K 571
Query: 244 NFELLKEELLRVKNVKDVR--------------LARDDSFDVYFKSLDDSINGI-LQVIS 288
+L K L ++V ++ L++ F F+ L+ +N + ++ S
Sbjct: 572 RCDLEKLTSLISRHVGTIQPFSIKGRDVCYKLPLSKSKYFSSLFRDLESQMNILGVRGFS 631
Query: 289 PQELKIKDIF 298
+ +++IF
Sbjct: 632 LSSVSLEEIF 641
>pir||F82572 sodium ABC transporter ATP-binding protein XF2329 [imported] -
Xylella fastidiosa (strain 9a5c)
>gi|9107498|gb|AAF85128.1|AE004043_12 (AE004043) sodium
ABC transporter ATP-binding protein [Xylella fastidiosa]
Length = 248
Score = 146 bits (365), Expect = 3e-34
Identities = 80/230 (34%), Positives = 128/230 (54%), Gaps = 1/230 (0%)
Query: 3 ILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSG 62
++ + + K F T KG V AV ++SF A G + G+LGPNGAGKTTTLRM+ T+ PD G
Sbjct: 1 MITAEHLHKSFKTKKGLVNAVKDLSFHAADGRITGLLGPNGAGKTTTLRMLYTLLIPDQG 60
Query: 63 EVLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCEDI 122
+ +DG+DAV +P+ VR+ + + + L+ R+ I Y+ G S+ D +
Sbjct: 61 CISIDGVDAVSDPMTVRRGLGVLPDACGIYKRLTARENIAYFGELHGLSRIDIAARLSIL 120
Query: 123 LELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIK 182
+ + ++ S G + ++ +A AL D + LDEPT G+D + RK + ++
Sbjct: 121 SKALDMDDILDRQAAGFSHGQRTKIAIARALVHDPRNIILDEPTNGLDVMTTRKLRDFLR 180
Query: 183 EKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFGK 232
+ L +G +I +SH + EV L D +I++ G +V GS EL+ R GK
Sbjct: 181 Q-LRAEGRCIIFSSHIMQEVAALCDHIIVIANGTVVVAGSGDELRARTGK 229
>sp|P46903|NATA_BACSU ATP-BINDING TRANSPORT PROTEIN NATA (NA+ ABC TRANSPORTER)
>gi|7445612|pir||A69666 Na+ ABC transporter (extrusion)
(ATP-binding protein) natA - Bacillus subtilis
>gi|973330|gb|AAB53022.1| (U30873) NatA [Bacillus
subtilis] >gi|2415726|dbj|BAA22236.1| (AB000617) NatA
[Bacillus subtilis] >gi|2632561|emb|CAB12069.1| (Z99105)
Na+ ABC transporter (ATP-binding protein) [Bacillus
subtilis]
Length = 246
Score = 146 bits (364), Expect = 4e-34
Identities = 78/225 (34%), Positives = 135/225 (59%), Gaps = 2/225 (0%)
Query: 3 ILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSG 62
++ + +++F K V AV +VS + GEV+GILG NGAGKTT LRMIA++ P G
Sbjct: 1 MITLTDCSRRFQDKKKVVKAVRDVSLTIEKGEVVGILGENGAGKTTMLRMIASLLEPSQG 60
Query: 63 EVLVDGIDAVKNPLEVRKRIAYM-TQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCED 121
+ VDG D VK P EV++RI + E L ++ ++ + Y+ R G ++ + K ED
Sbjct: 61 VITVDGFDTVKQPAEVKQRIGVLFGGETGLYDRMTAKENLQYFGRLYGLNRHEIKARIED 120
Query: 122 ILELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELI 181
+ + FG++ + +++ S G++++V +A AL D ++ DEPT G+D S E I
Sbjct: 121 LSKRFGMRDYMNRRVGGFSKGMRQKVAIARALIHDPDIILFDEPTTGLDITSSNIFREFI 180
Query: 182 KEKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKEL 226
++L+ + T++ +SH + EV+ L D VI+++ G+++ G+ + L
Sbjct: 181 -QQLKREQKTILFSSHIMEEVQALCDSVIMIHSGEVIYRGALESL 224
>pir||T36741 probable ABC-type transport system ATP-binding protein -
Streptomyces coelicolor >gi|5531429|emb|CAB50934.1|
(AL096849) putative ABC-transporter ATP-binding protein
[Streptomyces coelicolor A3(2)]
Length = 332
Score = 146 bits (364), Expect = 4e-34
Identities = 81/223 (36%), Positives = 125/223 (55%), Gaps = 3/223 (1%)
Query: 18 GEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSGEVLVDGIDAVKNPLE 77
G V A+ + + G V G+LGPNGAGKTT +R++ T+ RPD+G V G D V+
Sbjct: 17 GTVRALRGLDLAVPEGTVCGLLGPNGAGKTTAVRLLTTLLRPDAGSARVAGHDLVREAAA 76
Query: 78 VRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCEDILELFGLKTHAHKKPF 137
VR+ I Q + L+ R + + R RDA +++L+ FGL A +
Sbjct: 77 VRRLIGVTGQYASVDGDLTGRQNLRLFARLHRV--RDAAARADELLDRFGLAEAADRPAV 134
Query: 138 QLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIKEKLEDKGVTVILTSH 197
LS GL+RR+ LA +L ++FLDEPT G+DP + + WE ++ L+ G TV+LT+
Sbjct: 135 TLSGGLRRRLDLAASLVRRPEVLFLDEPTTGLDPAGRNRVWETVR-ALKADGTTVLLTTQ 193
Query: 198 DLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFGKTVRIVLEE 240
L E + LAD + ++++G++ GSP ELK G + V+ +
Sbjct: 194 YLEEADRLADDIALVDRGRVAHTGSPAELKALVGTYAQAVVAD 236
>gb|AAF99566.1| (AF167161) unknown [Staphylococcus aureus]
Length = 309
Score = 146 bits (364), Expect = 4e-34
Identities = 85/270 (31%), Positives = 151/270 (55%), Gaps = 11/270 (4%)
Query: 3 ILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSG 62
I+E+ ++TK++ G IAVNN+S + SG++ G LG NGAGKTTT+RM+ + +P G
Sbjct: 7 IIEINNLTKQY----GSQIAVNNLSITVESGQIYGFLGRNGAGKTTTIRMLLGLIKPTKG 62
Query: 63 EVLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCEDI 122
+ + + N E+ K I M + P L+ ++ + + G K +A E++
Sbjct: 63 NIKIFEKEFESNKTEILKNIGAMVETPGFYSNLTAKENLTINAKILGIQKENA---IEEV 119
Query: 123 LELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIK 182
LE+ GL + K S G+K+R+ +A AL + L+ LDEPT G+DP ++ +LIK
Sbjct: 120 LEIVGLASEKVKLFKNYSLGMKQRLGIARALLHNPELLILDEPTNGLDPIGIKEIRKLIK 179
Query: 183 EKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFGKTVRIVLEEPI 242
+ + + +T++++SH L E+E L D+V I++ G ++ E ++LKK+ + + I + +
Sbjct: 180 DLAQSRNITILISSHILSEIEQLVDKVGIIHNGVLLEEIMYEDLKKKNRQFISISVSDEE 239
Query: 243 KNFELLKEELLRVKNVKDVRLARDDSFDVY 272
K LL+ + D ++ + F +Y
Sbjct: 240 KVACLLETNF----GIYDYKIKENGEFKIY 265
>dbj|BAB07698.1| (AP001520) ABC transporter (ATP-binding protein) [Bacillus
halodurans]
Length = 257
Score = 145 bits (362), Expect = 7e-34
Identities = 80/227 (35%), Positives = 128/227 (56%), Gaps = 7/227 (3%)
Query: 4 LEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSGE 63
+ VK + K F + V F+ GE+ +LG NGAGKTTT+ +++T+ +PD GE
Sbjct: 6 ISVKRLKKSFKNKD----VLKGVDFAVQRGEIFALLGSNGAGKTTTVNILSTLLKPDEGE 61
Query: 64 VLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCEDIL 123
+ G D + P VR+ I+ Q L L+ R+ ++ + RG + + + +L
Sbjct: 62 ASICGFDVQRQPDHVRQSISLTGQFAALDGMLTGRENLMIIAKLRGVP--NPSQVADHLL 119
Query: 124 ELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIKE 183
F L A+++ Q S G+KRR+ +A +L ++FLDEPT G+DP + + W+ +KE
Sbjct: 120 ARFSLTDAANRRADQYSGGMKRRLDIAMSLIGKPAVIFLDEPTTGLDPEGRIEVWDAVKE 179
Query: 184 KLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRF 230
L G T++LT+ L E E LADR+ I++ GKI+ G+ ELK+ F
Sbjct: 180 -LAGGGTTILLTTQYLEEAEQLADRIAILHDGKIITTGTLAELKEMF 225
>pir||S72783 probable ABC-type transport protein B1496_F3_97 - Mycobacterium
leprae >gi|466902|gb|AAA17147.1| (U00013) abc2;
B1496_F3_97 [Mycobacterium leprae]
>gi|2398710|emb|CAB16175.1| (Z99125) ABC-type
transporter [Mycobacterium leprae]
Length = 315
Score = 145 bits (361), Expect = 9e-34
Identities = 86/224 (38%), Positives = 126/224 (55%), Gaps = 10/224 (4%)
Query: 3 ILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSG 62
++ ++ V K + G ++AV+N+ +S EVL +LGPNGAGKTTT+ M RPD+G
Sbjct: 14 VIRLRGVCKHY----GSILAVSNLDLDIHSAEVLALLGPNGAGKTTTVEMCEGFVRPDAG 69
Query: 63 EVLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCEDI 122
+ V G+D + + +R RI M Q P + + + E +
Sbjct: 70 TIEVLGLDPITDNARLRARIGVMLQGGGGYPAARAGEMLNLVASYAA-----DPLDPEWL 124
Query: 123 LELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIK 182
LE GL A +LS G ++R+ LAC L LVFLDEPTAG+D ++ WELI
Sbjct: 125 LETLGLTDVARTTYRRLSGGQQQRLALACTLVGRPELVFLDEPTAGMDTHARLLVWELI- 183
Query: 183 EKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKEL 226
+ L GVTV+LT+H L E E LADR++I++ G+++A G+P EL
Sbjct: 184 DTLRRDGVTVVLTTHQLKEAEELADRLVIIDHGRMIAAGTPTEL 227
>pir||T36000 probable ABC-type transport system ATP-binding chain - Streptomyces
coelicolor >gi|5459395|emb|CAB50753.1| (AL096839)
putative ABC transporter, ATP-binding subunit
[Streptomyces coelicolor A3(2)]
Length = 307
Score = 145 bits (361), Expect = 9e-34
Identities = 89/230 (38%), Positives = 134/230 (57%), Gaps = 21/230 (9%)
Query: 2 PILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDS 61
P+++V+++ K++ G AVN + A +G V +LGPNGAGKTTT+ RPDS
Sbjct: 5 PVVQVQALVKRY----GTKTAVNGLDLVARTG-VTAVLGPNGAGKTTTVETCEGYRRPDS 59
Query: 62 GEVLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHC-- 119
G V V G+D V+ E+R RI M Q + + + + AK H
Sbjct: 60 GTVRVLGLDPVRQGAELRPRIGVMLQSGGVYSGARADEML----------RHVAKLHAHP 109
Query: 120 ---EDILELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRK 176
+ ++E GL + +LS G ++R+ LA A+ LVFLDEPTAG+DP+++R
Sbjct: 110 LDVDALIERLGLDSCGRTTYRRLSGGQQQRLALAMAVVGRPELVFLDEPTAGLDPQARRA 169
Query: 177 TWELIKEKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKEL 226
TW+L+++ L GV+VILT+H + E E LAD V I++ G++VA+GSP+EL
Sbjct: 170 TWDLVRD-LRGDGVSVILTTHHMDEAEQLADDVAIIDTGRVVAQGSPEEL 218
>pir||E70337 ABC transporter - Aquifex aeolicus >gi|2983089|gb|AAC06695.1|
(AE000689) ABC transporter [Aquifex aeolicus]
Length = 238
Score = 144 bits (360), Expect = 1e-33
Identities = 85/226 (37%), Positives = 130/226 (56%), Gaps = 7/226 (3%)
Query: 3 ILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSG 62
+LEV+ V K F K + S S N GE++G+LGPNGAGKTT I D G
Sbjct: 1 MLEVREVEKSFKKKK----VLKGGSLSVNKGEIVGLLGPNGAGKTTLFNSIIGFISVDKG 56
Query: 63 EVLVDGIDAVKNP--LEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCE 120
+VL+DG D P +K +A++ QE L L+V + ++ + F SK +A E
Sbjct: 57 KVLLDGEDVTHLPPFKRAQKGLAFLPQEHTLFEDLTVLENLLIFLEFFTDSKEEAITKAE 116
Query: 121 DILELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWEL 180
+LE FGL +K + LS G KRR+++A +L + V LDEP AG+DP + E+
Sbjct: 117 ALLEDFGLLELKDQKAYALSGGQKRRLEIARSLITTPKYVLLDEPFAGLDPIIVSEIREI 176
Query: 181 IKEKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKEL 226
+K L++ G+ V++T H++ E + DRV I+++GK++A G P+E+
Sbjct: 177 VK-NLKNNGIGVLITDHNVRETIKMVDRVYIISEGKVLAHGKPEEV 221
>pir||A83142 probable ATP-binding component of ABC transporter PA4037 [imported]
- Pseudomonas aeruginosa (strain PAO1)
>gi|9950232|gb|AAG07424.1|AE004820_9 (AE004820) probable
ATP-binding component of ABC transporter [Pseudomonas
aeruginosa]
Length = 308
Score = 144 bits (360), Expect = 1e-33
Identities = 76/242 (31%), Positives = 138/242 (56%), Gaps = 8/242 (3%)
Query: 3 ILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSG 62
++++ ++K+F G + VN++SF + GE++G+LGPNGAGK+TTL+M++ P +G
Sbjct: 1 MIDIDRLSKRF---SGRTV-VNDLSFRIDRGEIVGLLGPNGAGKSTTLKMLSGFLAPSAG 56
Query: 63 EVLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCEDI 122
V + G D + +K I Y+ + ++V ++ + R +S R+ ++ +
Sbjct: 57 SVRIFGFDMQDKARQAQKLIGYLPENAPSYGEMTVEGFLAFVASIRDYSGREKRRRIDSA 116
Query: 123 LELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIK 182
++ L+ LS G KRRV LA A+ D L+ LDEPT G+DP K + +L+K
Sbjct: 117 MDCMELRDERRSIIETLSKGFKRRVALAQAILHDPELLLLDEPTDGLDPNQKHQVRQLVK 176
Query: 183 EKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKEL--KKRFGKTVRIVLEE 240
E K V++++H L EV ++ R +++N G+++A+ +P EL + R+ V + +E
Sbjct: 177 NLSESK--IVVISTHILEEVSFMCSRALVINGGRLLADNTPGELRTRSRYHHAVSLSIEA 234
Query: 241 PI 242
P+
Sbjct: 235 PV 236
>gb|AAG21390.1|AF302051_4 (AF302051) ABC transporter ATP binding subunit [Bacillus
licheniformis]
Length = 299
Score = 144 bits (360), Expect = 1e-33
Identities = 101/322 (31%), Positives = 162/322 (49%), Gaps = 39/322 (12%)
Query: 3 ILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSG 62
++ + +VTK F + AV+ + FS GE++ ILGPNGAGKTTT+ MI + +P +G
Sbjct: 4 VVSLTNVTKTFR----QKTAVDQIDFSIKKGEIVAILGPNGAGKTTTISMILGLLKPTAG 59
Query: 63 EVLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYII-----YYFRFRGFSKRDAKK 117
+ + D++ + VR++I M QE + P L R II YY + F K
Sbjct: 60 NITL--FDSMPHEKRVREKIGTMLQEVSVMPGLRCRVEIIELIRSYYPKPLSFQKLRTLT 117
Query: 118 HCEDILELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKT 177
D LKT A K LS G KRR+ A AL+ D L+ DEPT G+D S+ +
Sbjct: 118 GLTD----KDLKTQAEK----LSGGQKRRLGFALALAGDPELMIFDEPTVGMDITSRNRF 169
Query: 178 WELIKEKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFGKTVRIV 237
W+ + + L ++G T+I ++H L E + A R+++ GKIVA+G+P ++K R K
Sbjct: 170 WQTV-QSLAEQGKTIIFSTHYLQEADDAAQRILLFKDGKIVADGTPLQIKSRISKHSVSF 228
Query: 238 LEEPIKNFELL-----KEELLRVKNVKDVRLARDDSFDVYFKSLDDSINGILQVISPQEL 292
+ +P ++ E L E++ R N + A D IL++I +++
Sbjct: 229 IVDPEQSLEKLYQHPETEQIFRKNNRVYIDTANTDK--------------ILELIFSEKI 274
Query: 293 KIKDIFTATANFEDVYLEIIER 314
DI N E+ + ++ +
Sbjct: 275 GAYDIQIERGNLEEAFRQLTSK 296
>gb|AAA21451.1| (U01058) ABC family transporter [Entamoeba histolytica]
Length = 808
Score = 144 bits (359), Expect = 2e-33
Identities = 99/317 (31%), Positives = 163/317 (51%), Gaps = 13/317 (4%)
Query: 4 LEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSGE 63
L + +TK F AVN + + E G+LG NGAGKTTT+ M+ + P+ G
Sbjct: 489 LIINGLTKTFKQLGNTQTAVNQLCLEVGN-ETFGLLGQNGAGKTTTISMLTGLIEPNGGS 547
Query: 64 VLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCEDIL 123
V G + + +V + Q L P L+ + I++Y R +G + +K + IL
Sbjct: 548 ATVCGYNIHNSMEDVHTVVGVCPQFDVLWPDLTTYEIILFYCRLKGHFLK-SKSVAKHIL 606
Query: 124 ELFGLKTHAHKKP-----FQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTW 178
E GL + KP QLS G++RR+ +A A++ + ++FLDEPT G+D +R W
Sbjct: 607 EDVGLWSDKDPKPQNRRSSQLSGGMRRRLSIAIAMTGNPKVIFLDEPTTGLDVAIRRDVW 666
Query: 179 ELIKEKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRF--GKTVRI 236
+LI + ++ +I+T+H + E + L DRV IM+ G ++A G+ + ++ + G ++I
Sbjct: 667 DLILKIQRNR--CIIITTHSMEEADVLCDRVGIMSDGDLIALGTCQRIRNHYAPGYYIKI 724
Query: 237 VLEEPIKNFELLKEELLRVKNVKDVRLARDDSFDVYFKSLDDSINGILQVISPQELKIKD 296
EE I+ LK+ L VK+ R + K L + + +L+ +ELKI+D
Sbjct: 725 ASEERIEVTNFLKQLLGEDVEVKEERGILTAMIPIDKKRLSNIFSEVLE--HKEELKIED 782
Query: 297 IFTATANFEDVYLEIIE 313
ED ++EIIE
Sbjct: 783 WEIQQKGLEDAFIEIIE 799
>pir||E70871 hypothetical protein Rv1458c - Mycobacterium tuberculosis (strain
H37RV) >gi|2791392|emb|CAA15988.1| (AL021184)
hypothetical protein Rv1458c [Mycobacterium
tuberculosis]
Length = 313
Score = 144 bits (359), Expect = 2e-33
Identities = 91/250 (36%), Positives = 132/250 (52%), Gaps = 10/250 (4%)
Query: 3 ILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSG 62
+L ++ V K++ G + AV+N+ + EV+ +LGPNGAGKTTT+ M RPD+G
Sbjct: 11 VLRLRGVCKRY----GSITAVSNLDLDVHDAEVMALLGPNGAGKTTTVEMCEGFVRPDAG 66
Query: 63 EVLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCEDI 122
+ V G+D + + +R RI M Q P + + ++ H +
Sbjct: 67 SIEVLGLDPITDNARLRARIGVMLQGGGGYPAARAGEMLDL---VASYAANPLDPHW--L 121
Query: 123 LELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIK 182
L+ GL A +LS G ++R+ LACAL LVFLDEPTAG+D ++ WELI
Sbjct: 122 LDTLGLTEAARTTYRRLSGGQQQRLALACALVGRPQLVFLDEPTAGMDAHARVLVWELI- 180
Query: 183 EKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFGKTVRIVLEEPI 242
+ L GVTV+LT+H L E E LADR++I++ G VA G+P EL + K P
Sbjct: 181 DALRRDGVTVVLTTHHLKEAEELADRLVIIDHGVTVAAGTPAELMRSGAKDQLRFTAPPR 240
Query: 243 KNFELLKEEL 252
+ LL L
Sbjct: 241 LDLSLLASAL 250
>pir||A59189 ATP-binding cassette transporter - human (fragment)
>gi|5689461|dbj|BAA83014.1| (AB028985) KIAA1062 protein
[Homo sapiens]
Length = 1529
Score = 144 bits (359), Expect = 2e-33
Identities = 97/319 (30%), Positives = 166/319 (51%), Gaps = 11/319 (3%)
Query: 3 ILEVKSVTKKFPTPK-GEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDS 61
+++++++TK + + K G ++AV+ + GE G+LG NGAGKT+T +M+
Sbjct: 1143 MVKIENLTKVYKSRKIGRILAVDRLCLGVRPGECFGLLGVNGAGKTSTFKMLTGDESTTG 1202
Query: 62 GEVLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCED 121
GE V+G +K L+V++ + Y Q L L+ R+++ Y R RG S +D + +
Sbjct: 1203 GEAFVNGHSVLKELLQVQQSLGYCPQCDALFDELTAREHLQLYTRLRGISWKDEARVVKW 1262
Query: 122 ILELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELI 181
LE L +A K S G KR++ A AL +FLDEPT G+DP+++R W LI
Sbjct: 1263 ALEKLELTKYADKPAGTYSGGNKRKLSTAIALIGYPAFIFLDEPTTGMDPKARRFLWNLI 1322
Query: 182 KEKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFGKTVRIVLEEP 241
+ ++ G +V+LTSH + E E L R+ IM G++ GS + LK RFG I +
Sbjct: 1323 LDLIK-TGRSVVLTSHSMEECEALCTRLAIMVNGRLRCLGSIQHLKNRFGDGYMITVR-- 1379
Query: 242 IKNFELLKEEL-LRVKNVKDVRLARDDSFDVYFKSLDDSINGILQVISPQE-----LKIK 295
K+ + +K+ + +N + L V ++ + I+ + QV S E L I+
Sbjct: 1380 TKSSQSVKDVVRFFNRNFPEAMLKERHHTKVQYQLKSEHIS-LAQVFSKMEQVSGVLGIE 1438
Query: 296 DIFTATANFEDVYLEIIER 314
D + ++V++ ++
Sbjct: 1439 DYSVSQTTLDNVFVNFAKK 1457
Score = 134 bits (333), Expect = 2e-30
Identities = 75/233 (32%), Positives = 126/233 (53%), Gaps = 4/233 (1%)
Query: 6 VKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSGEVL 65
V +TK + K +A+N +S + +V+ LG NGAGKTTT+ ++ ++ P SG
Sbjct: 86 VDKLTKVYKDDKK--LALNKLSLNLYENQVVSFLGHNGAGKTTTMSILTGLFPPTSGSAT 143
Query: 66 VDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCEDILEL 125
+ G D E+RK + Q L L+V +++ +Y R + ++ + ++ + ++E
Sbjct: 144 IYGHDIRTEMDEIRKNLGMCPQHNVLFDRLTVEEHLWFYSRLKSMAQEEIRREMDKMIED 203
Query: 126 FGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIKEKL 185
L H LS G+KR++ +A A + LDEPTAGVDP ++R W+LI +
Sbjct: 204 LELSNKRHSLVQTLSGGMKRKLSVAIAFVGGSRAIILDEPTAGVDPYARRAIWDLILK-- 261
Query: 186 EDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFGKTVRIVL 238
G T++L++H + E + L DR+ I++ GK+ GSP LK +G R+ L
Sbjct: 262 YKPGRTILLSTHHMDEADLLGDRIAIISHGKLKCCGSPLFLKGTYGDGYRLTL 314
>gb|AAG09372.1|AF178941_1 (AF178941) ATP-binding cassette sub-family A member 2 [Homo sapiens]
Length = 2436
Score = 144 bits (359), Expect = 2e-33
Identities = 97/319 (30%), Positives = 166/319 (51%), Gaps = 11/319 (3%)
Query: 3 ILEVKSVTKKFPTPK-GEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDS 61
+++++++TK + + K G ++AV+ + GE G+LG NGAGKT+T +M+
Sbjct: 2050 MVKIENLTKVYKSRKIGRILAVDRLCLGVRPGECFGLLGVNGAGKTSTFKMLTGDESTTG 2109
Query: 62 GEVLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCED 121
GE V+G +K L+V++ + Y Q L L+ R+++ Y R RG S +D + +
Sbjct: 2110 GEAFVNGHSVLKELLQVQQSLGYCPQCDALFDELTAREHLQLYTRLRGISWKDEARVVKW 2169
Query: 122 ILELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELI 181
LE L +A K S G KR++ A AL +FLDEPT G+DP+++R W LI
Sbjct: 2170 ALEKLELTKYADKPAGTYSGGNKRKLSTAIALIGYPAFIFLDEPTTGMDPKARRFLWNLI 2229
Query: 182 KEKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFGKTVRIVLEEP 241
+ ++ G +V+LTSH + E E L R+ IM G++ GS + LK RFG I +
Sbjct: 2230 LDLIK-TGRSVVLTSHSMEECEALCTRLAIMVNGRLRCLGSIQHLKNRFGDGYMITVR-- 2286
Query: 242 IKNFELLKEEL-LRVKNVKDVRLARDDSFDVYFKSLDDSINGILQVISPQE-----LKIK 295
K+ + +K+ + +N + L V ++ + I+ + QV S E L I+
Sbjct: 2287 TKSSQSVKDVVRFFNRNFPEAMLKERHHTKVQYQLKSEHIS-LAQVFSKMEQVSGVLGIE 2345
Query: 296 DIFTATANFEDVYLEIIER 314
D + ++V++ ++
Sbjct: 2346 DYSVSQTTLDNVFVNFAKK 2364
Score = 134 bits (333), Expect = 2e-30
Identities = 75/233 (32%), Positives = 126/233 (53%), Gaps = 4/233 (1%)
Query: 6 VKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSGEVL 65
V +TK + K +A+N +S + +V+ LG NGAGKTTT+ ++ ++ P SG
Sbjct: 993 VDKLTKVYKDDKK--LALNKLSLNLYENQVVSFLGHNGAGKTTTMSILTGLFPPTSGSAT 1050
Query: 66 VDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCEDILEL 125
+ G D E+RK + Q L L+V +++ +Y R + ++ + ++ + ++E
Sbjct: 1051 IYGHDIRTEMDEIRKNLGMCPQHNVLFDRLTVEEHLWFYSRLKSMAQEEIRREMDKMIED 1110
Query: 126 FGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIKEKL 185
L H LS G+KR++ +A A + LDEPTAGVDP ++R W+LI +
Sbjct: 1111 LELSNKRHSLVQTLSGGMKRKLSVAIAFVGGSRAIILDEPTAGVDPYARRAIWDLILK-- 1168
Query: 186 EDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFGKTVRIVL 238
G T++L++H + E + L DR+ I++ GK+ GSP LK +G R+ L
Sbjct: 1169 YKPGRTILLSTHHMDEADLLGDRIAIISHGKLKCCGSPLFLKGTYGDGYRLTL 1221
>emb|CAC11779.1| (AL445064) daunorubicin resistance protein related protein
[Thermoplasma acidophilum]
Length = 327
Score = 143 bits (358), Expect = 2e-33
Identities = 83/226 (36%), Positives = 135/226 (59%), Gaps = 11/226 (4%)
Query: 17 KGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSGEVLVDGIDAVKNPL 76
KG+ A+ +VSF V ++G NGAGKTT +R++AT P SG+V +D ID ++ P
Sbjct: 38 KGQT-ALRSVSFEIPMHGVFSLIGRNGAGKTTLVRILATELMPTSGKVFIDDIDIIREPD 96
Query: 77 EVRKRIAYMTQEPD----LTPPLSVRDYIIYYFRFRGFSKRDAKKHCEDILELFGLKTHA 132
+R+RIA + QE LTP +V +++Y RG +AK +++L GL + A
Sbjct: 97 SIRRRIAIIPQEARAISWLTPMQTVTTFLLY----RGIRYSEAKARAKEVLADLGLASVA 152
Query: 133 HKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIKEKLEDKGVTV 192
+ LS G KR+V +A ++SD ++F+DEPT G+DP S+ + W+++ + ++K +
Sbjct: 153 DRMNRMLSGGQKRKVLVAALVASDADILFMDEPTTGLDPISRSELWDILSDLKKEK--FI 210
Query: 193 ILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFGKTVRIVL 238
LT+H L E E L+DR+ I++QG++ A G+ +L+ K I L
Sbjct: 211 FLTTHYLEEAERLSDRIGILDQGEMKAIGTMSDLRSMVPKKYSISL 256
>emb|CAC08414.1| (AL392178) putative ABC transport system ATP-binding protein
[Streptomyces coelicolor]
Length = 324
Score = 143 bits (356), Expect = 3e-33
Identities = 77/225 (34%), Positives = 127/225 (56%), Gaps = 2/225 (0%)
Query: 18 GEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSGEVLVDGIDAVKNPLE 77
G+ ++ + + G V +LGPNGAGKTT +++++T+ PD+G++ V G D P
Sbjct: 16 GDKTVLDGIDLAVPEGTVFSLLGPNGAGKTTAVKILSTLVTPDAGDIRVGGHDLASAPQA 75
Query: 78 VRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCEDILELFGLKTHAHKKPF 137
VR I Q + ++ + ++ + + ++ ++LE F L A K
Sbjct: 76 VRGAIGVTGQFSAVDGLITGEENMLLMADLHHLPRPEGRRVAAELLERFDLTEAAGKPAS 135
Query: 138 QLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIKEKLEDKGVTVILTSH 197
S G+KRR+ +A L D ++FLDEPT G+DPRS+ W++I+ + D GVTV LT+
Sbjct: 136 TYSGGMKRRLDIAMTLVGDPRIIFLDEPTTGLDPRSRHTMWQIIRALVTD-GVTVFLTTQ 194
Query: 198 DLYEVEYLADRVIIMNQGKIVAEGSPKELKKRF-GKTVRIVLEEP 241
L E + LADR+ +++ G+I AEG+ +ELK+ G VR+ +P
Sbjct: 195 YLEEADELADRIAVLHDGRIAAEGTAEELKRLVPGGHVRLRFTDP 239
>gb|AAG20087.1| (AE005088) ABC transport protein; Trp2 [Halobacterium sp. NRC-1]
Length = 249
Score = 143 bits (356), Expect = 3e-33
Identities = 82/226 (36%), Positives = 127/226 (55%), Gaps = 6/226 (2%)
Query: 4 LEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSGE 63
+E +++TK++ G+ A+ + + SG V G LGPNGAGKTTT+RM+ T+ P SG
Sbjct: 6 IEARALTKRY----GDTTAIERIDLAVPSGSVYGFLGPNGAGKTTTMRMLTTLVEPTSGT 61
Query: 64 VLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCEDIL 123
V G++ V + V I Y+ +EP L L+ R+ + Y R A++ D+L
Sbjct: 62 ATVAGVE-VTDRASVVPNIGYLPEEPPLHAELTAREQLRYIAGLRDIPDPRAEQRITDLL 120
Query: 124 ELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIKE 183
E F L A ++ S G+K++ + A+ D ++FLDEPT+G+DPR+ R + I +
Sbjct: 121 ERFSLGDDADRRISTYSKGMKQKTGIIQAMLHDPDVLFLDEPTSGLDPRAARTVRDTIAD 180
Query: 184 KLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKR 229
L TV L++H L V+ LAD V ++ G +V EG P LK+R
Sbjct: 181 -LTAGDATVFLSTHILPVVDDLADTVGVLYDGSLVTEGPPDALKQR 225
>gi|6671495 ATP-binding cassette, sub-family A, member 4; ATP-binding cassette
10; Rim protein [Mus musculus] >gi|2547314|gb|AAC23916.1|
(AF000149) ATP-binding cassette transporter [Mus
musculus]
Length = 2310
Score = 142 bits (355), Expect = 4e-33
Identities = 85/246 (34%), Positives = 140/246 (56%), Gaps = 4/246 (1%)
Query: 1 MPILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPD 60
+P + VK++ K F P G AV+ ++ + ++ LG NGAGKTTTL ++ + P
Sbjct: 926 VPGVCVKNLVKVFE-PSGRP-AVDRLNITFYENQITAFLGHNGAGKTTTLSILTGLLPPT 983
Query: 61 SGEVLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCE 120
SG VL+ G D N VR+ + Q L L+V ++I++Y + +G S +A+ E
Sbjct: 984 SGTVLIGGKDIETNLDVVRQSLGMCPQHNILFHHLTVAEHILFYAQLKGRSWEEAQLEME 1043
Query: 121 DILELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWEL 180
+LE GL +++ LS G++R++ +A A D +V LDEPT+GVDP S+R W+L
Sbjct: 1044 AMLEDTGLHHKRNEEAQDLSGGMQRKLSVAIAFVGDSKVVVLDEPTSGVDPYSRRSIWDL 1103
Query: 181 IKEKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFGKTVRIVLEE 240
+ + G T+I+++H + E + L DR+ I++QG++ G+P LK FG + L
Sbjct: 1104 LLK--YRSGRTIIMSTHHMDEADLLGDRIAIISQGRLYCSGTPLFLKNCFGTGFYLTLVR 1161
Query: 241 PIKNFE 246
+KN +
Sbjct: 1162 KMKNIQ 1167
Score = 123 bits (305), Expect = 3e-27
Identities = 75/229 (32%), Positives = 119/229 (51%), Gaps = 3/229 (1%)
Query: 3 ILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSG 62
IL++ +TK + AV+ + GE G+LG NGAGKTTT +M+ SG
Sbjct: 1936 ILKLNELTKVYSGSSSP--AVDRLCVGVRPGECFGLLGVNGAGKTTTFKMLTGDTTVTSG 1993
Query: 63 EVLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCEDI 122
+ V G + + +V + + Y Q + L+ R+++ Y R RG ++ +K
Sbjct: 1994 DATVAGKSILTSISDVHQNMGYCPQFDAIDDLLTGREHLYLYARLRGVPSKEIEKVANWG 2053
Query: 123 LELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIK 182
++ GL +A + S G KR++ A AL+ PL+ LDEPT G+DP+++R W I
Sbjct: 2054 IQSLGLSLYADRLAGTYSGGNKRKLSTAIALTGCPPLLLLDEPTTGMDPQARRMLWNTIV 2113
Query: 183 EKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFG 231
+ + G V+LTSH + E E L R+ IM +G G+ + LK +FG
Sbjct: 2114 SIIRE-GRAVVLTSHSMEECEALCTRLAIMVKGTFQCLGTIQHLKYKFG 2161
>gi|11498586 osmoprotection protein (proV) [Archaeoglobus fulgidus]
>gi|7428829|pir||E69372 osmoprotection protein (proV)
homolog - Archaeoglobus fulgidus
>gi|2649615|gb|AAB90260.1| (AE001036) osmoprotection
protein (proV) [Archaeoglobus fulgidus]
Length = 361
Score = 142 bits (354), Expect = 6e-33
Identities = 77/223 (34%), Positives = 134/223 (59%), Gaps = 6/223 (2%)
Query: 6 VKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSGEVL 65
+++V+K++ G AV ++ + GE+L ++GP+G+GKTTTLRMI + PD G VL
Sbjct: 11 LENVSKRY----GNFFAVRELNLTVEGGELLALIGPSGSGKTTTLRMINRLVEPDEGRVL 66
Query: 66 VDGIDAVK-NPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCEDILE 124
++G D + + + +R+ I Y+ Q+ L P + V + I + G+ + ++ +++L+
Sbjct: 67 INGQDISEIDAVRLRRNIGYVIQQIGLFPHMKVWENIGLIPKLEGWEEEKIRQRVDELLK 126
Query: 125 LFGLKTH-AHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIKE 183
L L A + P+QLS G ++RV LA AL+ + PL+ +DEP +DP +++ E
Sbjct: 127 LVDLPIEFAERYPWQLSGGQQQRVGLARALALNPPLLLMDEPFGALDPILRKQLQEEFAR 186
Query: 184 KLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKEL 226
E+ G T++ +HD+ E L DR+ IMN+G++V G P+EL
Sbjct: 187 IKEELGKTIVFVTHDVEEAFRLGDRIAIMNEGRLVQVGEPEEL 229
>gb|AAC23915.1| (AF000148) ATP-binding cassette transporter [Homo sapiens]
Length = 2273
Score = 142 bits (354), Expect = 6e-33
Identities = 84/246 (34%), Positives = 141/246 (57%), Gaps = 4/246 (1%)
Query: 1 MPILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPD 60
+P + VK++ K F P G AV+ ++ + ++ LG NGAGKTTTL ++ + P
Sbjct: 926 VPGVCVKNLVKIFE-PSGRP-AVDRLNITFYENQITAFLGHNGAGKTTTLSILTGLLPPT 983
Query: 61 SGEVLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCE 120
SG VLV G D + VR+ + Q L L+V +++++Y + +G S+ +A+ E
Sbjct: 984 SGTVLVGGRDIETSLDAVRQSLGMCPQHNILFHHLTVAEHMLFYAQLKGKSQEEAQLEME 1043
Query: 121 DILELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWEL 180
+LE GL +++ LS G++R++ +A A D +V LDEPT+GVDP S+R W+L
Sbjct: 1044 AMLEDTGLHHKRNEEAQDLSGGMQRKLSVAIAFVGDAKVVILDEPTSGVDPYSRRSIWDL 1103
Query: 181 IKEKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFGKTVRIVLEE 240
+ + G T+I+++H + E + L DR+ I+ QG++ G+P LK FG + + L
Sbjct: 1104 LLK--YRSGRTIIMSTHHMDEADLLGDRIAIIAQGRLYCSGTPLFLKNCFGTGLYLTLVR 1161
Query: 241 PIKNFE 246
+KN +
Sbjct: 1162 KMKNIQ 1167
Score = 127 bits (315), Expect = 2e-28
Identities = 79/229 (34%), Positives = 117/229 (50%), Gaps = 3/229 (1%)
Query: 3 ILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSG 62
IL + +TK +P AV+ + GE G+LG NGAGKTTT +M+ SG
Sbjct: 1937 ILRLHELTKIYPGTSSP--AVDRLCVGVRPGECFGLLGVNGAGKTTTFKMLTGDNTVTSG 1994
Query: 63 EVLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCEDI 122
+ V G + N EV + + Y Q + L+ R+++ Y R RG + +K
Sbjct: 1995 DATVAGKSILTNISEVHQNMGYCPQFDAIDELLTGREHLYLYARLRGVPAEEIEKVANWS 2054
Query: 123 LELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIK 182
++ GL +A S G KR++ A AL PLV LDEPT G+DP+++R W +I
Sbjct: 2055 IKSLGLTVYADCLAGTYSGGNKRKLSTAIALIGCPPLVLLDEPTTGMDPQARRMLWNVIV 2114
Query: 183 EKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFG 231
+ + G V+LTSH + E E L R+ IM +G G+ + LK +FG
Sbjct: 2115 SIIRE-GRAVVLTSHSMEECEALCTRLAIMVKGAFRCMGTIQHLKSKFG 2162
>pir||B72334 ABC transporter, ATP-binding protein - Thermotoga maritima (strain
MSB8) >gi|4981322|gb|AAD35875.1|AE001747_18 (AE001747)
ABC transporter, ATP-binding protein [Thermotoga
maritima]
Length = 260
Score = 142 bits (354), Expect = 6e-33
Identities = 72/230 (31%), Positives = 134/230 (57%), Gaps = 6/230 (2%)
Query: 3 ILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSG 62
++ + +T+KF G+ AV+++ S GE+ G LGPNGAGKTTT++M+ + +P G
Sbjct: 11 LIVARGLTRKF----GDFTAVDHIDLSVRPGEIYGFLGPNGAGKTTTIKMLTGVLKPTEG 66
Query: 63 EVLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCEDI 122
EV + G+ + +E++K I + EP + L+ ++++ + + + K ++
Sbjct: 67 EVEILGMKMSTHEIEIKKSIGVIPDEPKIYSHLTGKEFLDFIIEIYDLKEEEIDKRIAEL 126
Query: 123 LELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIK 182
E F + + K+ ++S G+K+++ L ++FLDEPT G+D +S R +L+
Sbjct: 127 CEAFKV-DYLGKRVGEMSHGMKQKLMLVSVFMRKPKVIFLDEPTVGLDAKSAR-ILKLLL 184
Query: 183 EKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFGK 232
K D+G + LT+H L E + DR+ I+N+G+++AEG+ +EL+K G+
Sbjct: 185 RKYADEGAAIFLTTHILEIAEKMCDRIGIINKGRLIAEGTMEELRKLAGQ 234
>pir||E81337 ABC-transporter ATP-binding protein Cj0669 [imported] -
Campylobacter jejuni (strain NCTC 11168)
>gi|6968131|emb|CAB72946.1| (AL139076) ABC-transporter
ATP-binding protein [Campylobacter jejuni]
Length = 242
Score = 142 bits (354), Expect = 6e-33
Identities = 79/206 (38%), Positives = 120/206 (57%), Gaps = 3/206 (1%)
Query: 23 VNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSGEVLVDGIDAVKNPLEVRKR- 81
++ +S NSGEV+G+LGPNGAGKTTT MI + P SG+VL+DG+D K+PL R R
Sbjct: 19 IHGISLEVNSGEVVGLLGPNGAGKTTTFYMICGLISPSSGKVLLDGLDVTKDPLNKRARS 78
Query: 82 -IAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCEDILELFGLKTHAHKKPFQLS 140
I Y+ QE + LSV D ++ + K+ E +LEL ++ +K LS
Sbjct: 79 GIGYLPQESSIFKDLSVEDNLLLAAQIFYKDKKILHDKVEQMLELLSIEPIRLRKGLSLS 138
Query: 141 TGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIKEKLEDKGVTVILTSHDLY 200
G +RR ++A +L + + LDEP AGVDP + + LIKE L+ G+ V++T H++
Sbjct: 139 GGERRRCEIARSLMCEPKFLLLDEPFAGVDPIAVAEIQTLIKE-LKRLGIGVLITDHNVR 197
Query: 201 EVEYLADRVIIMNQGKIVAEGSPKEL 226
E + DR ++ G ++A G+ E+
Sbjct: 198 ETLAICDRAYVIRSGSLLASGNADEI 223
>gb|AAK40417.1| ABC transporter, ATP binding protein [Sulfolobus solfataricus]
Length = 246
Score = 141 bits (353), Expect = 8e-33
Identities = 80/231 (34%), Positives = 134/231 (57%), Gaps = 9/231 (3%)
Query: 3 ILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSG 62
I+EVK + K++ + + +SF+ GE+ +LGPNGAGKTTT+++++ + +P G
Sbjct: 5 IVEVKDLYKEYKDKE----VLRGISFTVYKGEIFSLLGPNGAGKTTTVKILSCVLKPTRG 60
Query: 63 EVLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCEDI 122
EV V G ++R+RI M Q+ L+VR+ I Y+ + + +++
Sbjct: 61 EVKVIGYKVPNECGKIRERIGVMPQDYQGFLDLTVRENIEYFVKL----YNGKETQVDEL 116
Query: 123 LELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIK 182
+ L L+ ++K LS G RRV +A A + ++FLDEPT G+DP+++R WE+IK
Sbjct: 117 ISLLDLEKVKNQKLRYLSGGYVRRVGIASAFAGSQEILFLDEPTVGLDPKARRGFWEIIK 176
Query: 183 EKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFGKT 233
+++KGVT+ LT+H L E + L+DRV I+ GK++ + E+ F T
Sbjct: 177 -MMKNKGVTIFLTTHYLDEAQKLSDRVAILYGGKLIKVSTADEIMAEFKAT 226
>sp|P08720|NODI_RHILV NODULATION ATP-BINDING PROTEIN I >gi|78028|pir||A24400 nodulation
protein nodI - Rhizobium leguminosarum
>gi|46214|emb|CAA68618.1| (Y00548) nodI [Rhizobium
leguminosarum] >gi|225122|prf||1209215A gene nodI
[Rhizobium leguminosarum]
Length = 311
Score = 141 bits (353), Expect = 8e-33
Identities = 80/223 (35%), Positives = 129/223 (56%), Gaps = 5/223 (2%)
Query: 4 LEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSGE 63
+++ V+K + G I VN++SF+ +GE G+LGPNGAGK+T RMI + P G+
Sbjct: 13 IDLAGVSKSY----GGKIVVNDLSFTIAAGECFGLLGPNGAGKSTITRMILGMTSPSVGK 68
Query: 64 VLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCEDIL 123
+ V G R +I ++Q +L +VR+ ++ Y R+ S R+ + +L
Sbjct: 69 ITVLGAQEPGQVRLARAKIGIVSQFDNLDLEFTVRENLLVYGRYFRMSTREIETVIPSLL 128
Query: 124 ELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIKE 183
E L++ A+ + LS G+KRR+ LA AL +D L+ LDEPT G+DP ++ WE ++
Sbjct: 129 EFARLESKANTRVADLSGGMKRRLTLAGALINDPQLLILDEPTTGLDPHARHLIWERLRS 188
Query: 184 KLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKEL 226
L +G T++LT+H + E E L DR+ ++ G+ +AEG P L
Sbjct: 189 LLA-RGKTILLTTHIMEEAERLCDRLCVLEAGRKIAEGRPHAL 230
>pir||S75436 hypothetical protein c05019 - Sulfolobus solfataricus
>gi|1707842|emb|CAA69520.1| (Y08257) putative ABC
transporter [Sulfolobus solfataricus]
Length = 246
Score = 141 bits (353), Expect = 8e-33
Identities = 80/231 (34%), Positives = 134/231 (57%), Gaps = 9/231 (3%)
Query: 3 ILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSG 62
I+EVK + K++ + + +SF+ GE+ +LGPNGAGKTTT+++++ + +P G
Sbjct: 5 IVEVKDLYKEYKDKE----VLRGISFTVYKGEIFSLLGPNGAGKTTTVKILSCVLKPTRG 60
Query: 63 EVLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCEDI 122
EV V G ++R+RI M Q+ L+VR+ I Y+ + + +++
Sbjct: 61 EVKVIGYKVPNECGKIRERIGVMPQDYQGFLDLTVRENIEYFVKL----YNGKETQVDEL 116
Query: 123 LELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIK 182
+ L L+ ++K LS G RRV +A A + ++FLDEPT G+DP+++R WE+IK
Sbjct: 117 ISLLDLEKVKNQKLRYLSGGYVRRVGIASAFAGSQEILFLDEPTVGLDPKARRGFWEIIK 176
Query: 183 EKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFGKT 233
+++KGVT+ LT+H L E + L+DRV I+ GK++ + E+ F T
Sbjct: 177 -MMKNKGVTIFLTTHYLDEAQKLSDRVAILYGGKLIKVSTADEIMAEFKAT 226
>pir||C75310 ABC transporter, ATP-binding protein - Deinococcus radiodurans
(strain R1) >gi|6459931|gb|AAF11682.1|AE002048_2
(AE002048) ABC transporter, ATP-binding protein
[Deinococcus radiodurans]
Length = 258
Score = 141 bits (353), Expect = 8e-33
Identities = 74/210 (35%), Positives = 120/210 (56%), Gaps = 2/210 (0%)
Query: 18 GEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSGEVLVDGIDAVKNPLE 77
G+ V V F + GE++ + GPNGAGKTTT M+ RP G + + D + P+
Sbjct: 31 GKRQVVRGVDFRVSPGEIVALFGPNGAGKTTTFYMVVGFIRPGGGRIALGSRDLTRLPMH 90
Query: 78 VRKRIA--YMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCEDILELFGLKTHAHKK 135
R R+ Y+ QEP L+ RD ++ ++ ++ + + + +L FGL A+
Sbjct: 91 ERARLGLGYLPQEPSAFRKLTARDNLLAILEYQKLTRAEQEARADALLAEFGLTHLANSY 150
Query: 136 PFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIKEKLEDKGVTVILT 195
+QLS G +RR++LA AL++D + LDEP GVDP+S R+ LI+E + +G+ V +T
Sbjct: 151 AYQLSGGERRRLELARALTTDPDYLLLDEPFTGVDPKSIREIQRLIRELRDRRGIGVFIT 210
Query: 196 SHDLYEVEYLADRVIIMNQGKIVAEGSPKE 225
H++ E L DRV +M G+I +G+P++
Sbjct: 211 DHNVRETIALTDRVYLMYDGQIRFDGTPEQ 240
>gb|AAB17558.1| (U72493) ATP binding protein [Chlamydia trachomatis]
Length = 257
Score = 141 bits (352), Expect = 1e-32
Identities = 80/228 (35%), Positives = 129/228 (56%), Gaps = 7/228 (3%)
Query: 1 MPILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPD 60
M +L V ++ KK+ + N+VSF N+GE++G+LGPNGAGKTT + RPD
Sbjct: 1 MSVLSVCNLIKKY----NKKPVTNDVSFQVNAGEIVGLLGPNGAGKTTAFYQTVGLIRPD 56
Query: 61 SGEVLVDGIDAVKNPLEVRKR--IAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKH 118
SG++L D K P++ R R I Y+ QEP + L+V++ +I ++++
Sbjct: 57 SGKILFKNTDITKKPMDYRARLGIGYLAQEPTIFKELTVKENLICVLEIIYKTRKEQTHL 116
Query: 119 CEDILELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTW 178
+++ L T HKK LS G +RR+++AC L+ + ++ LDEP A VDP +
Sbjct: 117 LNALIDDLQLTTSLHKKAGSLSGGERRRLEIACVLALNPSVLLLDEPFANVDPLVIQNVK 176
Query: 179 ELIKEKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKEL 226
LIK L +G+ +++T H+ E+ +ADR ++ GKI EGS ++
Sbjct: 177 YLIK-ILASRGIGILITDHNAKELLSIADRCYLIIDGKIFFEGSSAQM 223
>sp|P55476|NODI_RHISN NODULATION ATP-BINDING PROTEIN I >gi|2182424|gb|AAB91694.1|
(AE000076) NodI [Rhizobium sp. NGR234]
Length = 343
Score = 141 bits (352), Expect = 1e-32
Identities = 76/223 (34%), Positives = 126/223 (56%), Gaps = 5/223 (2%)
Query: 4 LEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSGE 63
+E+ +V+K + G+ + V+ +SF+ SGE G+LGPNGAGK+T R++ + PD G
Sbjct: 45 IELTNVSKSY----GDKVVVDQLSFTITSGECFGLLGPNGAGKSTVSRLVLGLAPPDEGT 100
Query: 64 VLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCEDIL 123
+ V G R RI + Q L + R+ ++ + R+ G R+ ++ +L
Sbjct: 101 ITVLGEPVPARARLARSRIGVVPQFDTLDREFTARENLLVFGRYFGLHTRELEEAIPPLL 160
Query: 124 ELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIKE 183
+ L++ A QLS G++RR+ LACAL +D L+ LDEPT G+DP ++ WE ++
Sbjct: 161 DFARLESKADVPVAQLSGGMQRRLTLACALINDPQLLILDEPTTGLDPHARHLIWERLRS 220
Query: 184 KLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKEL 226
L G T++LT+H + E + L DR+ ++ G+ + EG P L
Sbjct: 221 LLA-LGKTILLTTHFMEEADRLCDRLCVIEHGRKIVEGRPHAL 262
>pir||G71486 probable ABC transporter ATPase - Chlamydia trachomatis (serotype
D, strain UW3/Cx) >gi|3329103|gb|AAC68248.1| (AE001336)
ABC Transporter ATPase [Chlamydia trachomatis]
Length = 239
Score = 141 bits (352), Expect = 1e-32
Identities = 80/228 (35%), Positives = 129/228 (56%), Gaps = 7/228 (3%)
Query: 1 MPILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPD 60
M +L V ++ KK+ + N+VSF N+GE++G+LGPNGAGKTT + RPD
Sbjct: 1 MSVLSVCNLIKKY----NKKPVTNDVSFQVNAGEIVGLLGPNGAGKTTAFYQTVGLIRPD 56
Query: 61 SGEVLVDGIDAVKNPLEVRKR--IAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKH 118
SG++L D K P++ R R I Y+ QEP + L+V++ +I ++++
Sbjct: 57 SGKILFKNTDITKKPMDYRARLGIGYLAQEPTIFKELTVKENLICVLEIIYKTRKEQTHL 116
Query: 119 CEDILELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTW 178
+++ L T HKK LS G +RR+++AC L+ + ++ LDEP A VDP +
Sbjct: 117 LNALIDDLQLTTSLHKKAGSLSGGERRRLEIACVLALNPSVLLLDEPFANVDPLVIQNVK 176
Query: 179 ELIKEKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKEL 226
LIK L +G+ +++T H+ E+ +ADR ++ GKI EGS ++
Sbjct: 177 YLIK-ILASRGIGILITDHNAKELLSIADRCYLIIDGKIFFEGSSAQM 223
>pir||S71363 probable ATP-binding cassette transporter ABC-3 - human
>gi|1514530|emb|CAA65825.1| (X97187) ABC-C transporter
[Homo sapiens]
Length = 1704
Score = 141 bits (351), Expect = 1e-32
Identities = 85/314 (27%), Positives = 171/314 (54%), Gaps = 10/314 (3%)
Query: 4 LEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSGE 63
+++K ++K F + AV +++ + G++ +LG NGAGKTTTL M+ ++ P SG
Sbjct: 530 IKIKHLSKVFRVGNKDRAAVRDLNLNLYEGQITVLLGHNGAGKTTTLSMLTGLFPPTSGR 589
Query: 64 VLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCEDIL 123
+ G + ++ +++RK + Q L L+V +++ +Y + +G S++ + + +L
Sbjct: 590 AYISGYEISQDMVQIRKSLGLCPQHDILFDNLTVAEHLYFYAQLKGLSRQKCPEEVKQML 649
Query: 124 ELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIKE 183
+ GL+ + + LS G++R++ + AL + ++ LDEPT+G+D S+R W+L++
Sbjct: 650 HIIGLEDKWNSRSRFLSGGMRRKLSIGIALIAGSKVLILDEPTSGMDAISRRAIWDLLQR 709
Query: 184 KLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFGKTVRIVL-EEPI 242
+ D+ T++LT+H + E + L DR+ IM +G++ GS LK+++G + L +EP
Sbjct: 710 QKSDR--TIVLTTHFMDEADLLGDRIAIMAKGELQCCGSSLFLKQKYGAGYHMTLVKEPH 767
Query: 243 KNFELLKEELLRVKNVKDVRLARDDSFDVYFKSLDDSINGILQVISPQELKIKDIFTAT- 301
N E + + L +V + L ++ F +S + + + E K K++ A+
Sbjct: 768 CNPEDISQ--LVHHHVPNATLESSAGAELSFILPRESTHRFEGLFAKLEKKQKELGIASF 825
Query: 302 ----ANFEDVYLEI 311
E+V+L +
Sbjct: 826 GASITTMEEVFLRV 839
Score = 134 bits (335), Expect = 1e-30
Identities = 79/228 (34%), Positives = 125/228 (54%), Gaps = 2/228 (0%)
Query: 4 LEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSGE 63
L +K ++K + + ++AV+ +S + GE G+LG NGAGKTTT +M+ SG+
Sbjct: 1381 LIIKELSKVYEQ-RVPLLAVDRLSLAVQKGECFGLLGFNGAGKTTTFKMLTGEESLTSGD 1439
Query: 64 VLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCEDIL 123
V G + +VR+RI Y Q L ++ R+ ++ Y R RG +R E+ L
Sbjct: 1440 AFVGGHRISSDVGKVRQRIGYCPQFDALLDHMTGREMLVMYARLRGIPERHIGACVENTL 1499
Query: 124 ELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIKE 183
L+ HA+K S G KR++ AL + ++FLDEP+ G+DP ++R W+ +
Sbjct: 1500 RGLLLEPHANKLVRTYSGGNKRKLSTGIALIGEPAVIFLDEPSTGMDPVARRLLWDTV-A 1558
Query: 184 KLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFG 231
+ + G +I+TSH + E E L R+ IM QG+ GSP+ LK +FG
Sbjct: 1559 RARESGKAIIITSHSMEECEALCTRLAIMVQGQFKCLGSPQHLKSKFG 1606
>gi|4501849 ATP-binding cassette, sub-family A member 3; ATP-binding cassette
3; ABC transporter 3 [Homo sapiens]
>gi|7387524|sp|Q99758|ABC3_HUMAN ATP-BINDING CASSETTE,
SUB-FAMILY A, MEMBER 3 (ATP-BINDING CASSETTE TRANSPORTER
3) (ATP-BINDING CASSETTE 3) (ABC-C TRANSPORTER)
>gi|11278926|pir||A59188 ATP-binding cassette
transporter ABC3 - human >gi|1699038|gb|AAC50967.1|
(U78735) ABC3 [Homo sapiens]
Length = 1704
Score = 141 bits (351), Expect = 1e-32
Identities = 85/314 (27%), Positives = 171/314 (54%), Gaps = 10/314 (3%)
Query: 4 LEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSGE 63
+++K ++K F + AV +++ + G++ +LG NGAGKTTTL M+ ++ P SG
Sbjct: 530 IKIKHLSKVFRVGNKDRAAVRDLNLNLYEGQITVLLGHNGAGKTTTLSMLTGLFPPTSGR 589
Query: 64 VLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCEDIL 123
+ G + ++ +++RK + Q L L+V +++ +Y + +G S++ + + +L
Sbjct: 590 AYISGYEISQDMVQIRKSLGLCPQHDILFDNLTVAEHLYFYAQLKGLSRQKCPEEVKQML 649
Query: 124 ELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIKE 183
+ GL+ + + LS G++R++ + AL + ++ LDEPT+G+D S+R W+L++
Sbjct: 650 HIIGLEDKWNSRSRFLSGGMRRKLSIGIALIAGSKVLILDEPTSGMDAISRRAIWDLLQR 709
Query: 184 KLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFGKTVRIVL-EEPI 242
+ D+ T++LT+H + E + L DR+ IM +G++ GS LK+++G + L +EP
Sbjct: 710 QKSDR--TIVLTTHFMDEADLLGDRIAIMAKGELQCCGSSLFLKQKYGAGYHMTLVKEPH 767
Query: 243 KNFELLKEELLRVKNVKDVRLARDDSFDVYFKSLDDSINGILQVISPQELKIKDIFTAT- 301
N E + + L +V + L ++ F +S + + + E K K++ A+
Sbjct: 768 CNPEDISQ--LVHHHVPNATLESSAGAELSFILPRESTHRFEGLFAKLEKKQKELGIASF 825
Query: 302 ----ANFEDVYLEI 311
E+V+L +
Sbjct: 826 GASITTMEEVFLRV 839
Score = 134 bits (335), Expect = 1e-30
Identities = 79/228 (34%), Positives = 125/228 (54%), Gaps = 2/228 (0%)
Query: 4 LEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSGE 63
L +K ++K + + ++AV+ +S + GE G+LG NGAGKTTT +M+ SG+
Sbjct: 1381 LIIKELSKVYEQ-RVPLLAVDRLSLAVQKGECFGLLGFNGAGKTTTFKMLTGEESLTSGD 1439
Query: 64 VLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCEDIL 123
V G + +VR+RI Y Q L ++ R+ ++ Y R RG +R E+ L
Sbjct: 1440 AFVGGHRISSDVGKVRQRIGYCPQFDALLDHMTGREMLVMYARLRGIPERHIGACVENTL 1499
Query: 124 ELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIKE 183
L+ HA+K S G KR++ AL + ++FLDEP+ G+DP ++R W+ +
Sbjct: 1500 RGLLLEPHANKLVRTYSGGNKRKLSTGIALIGEPAVIFLDEPSTGMDPVARRLLWDTV-A 1558
Query: 184 KLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFG 231
+ + G +I+TSH + E E L R+ IM QG+ GSP+ LK +FG
Sbjct: 1559 RARESGKAIIITSHSMEECEALCTRLAIMVQGQFKCLGSPQHLKSKFG 1606
>gb|AAC05632.1| (AF001945) rim ABC transporter [Homo sapiens]
Length = 2273
Score = 141 bits (351), Expect = 1e-32
Identities = 83/246 (33%), Positives = 139/246 (55%), Gaps = 4/246 (1%)
Query: 1 MPILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPD 60
+P + VK++ K F + N++F N ++ LG NGAGKTTTL ++ + P
Sbjct: 926 VPGVCVKNLVKIFEPCGRPAVDRLNITFYEN--QITAFLGHNGAGKTTTLSILTGLLPPT 983
Query: 61 SGEVLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCE 120
SG VLV G D + VR+ + Q L L+V +++++Y + +G S+ +A+ E
Sbjct: 984 SGTVLVGGRDIETSLDAVRQSLGMCPQHNILFHHLTVAEHMLFYAQLKGKSQEEAQLEME 1043
Query: 121 DILELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWEL 180
+LE GL +++ LS G++R++ +A A D +V LDEPT+GVDP S+R W+L
Sbjct: 1044 AMLEDTGLHHKRNEEAQDLSGGMQRKLSVAIAFVGDAKVVILDEPTSGVDPYSRRSIWDL 1103
Query: 181 IKEKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFGKTVRIVLEE 240
+ + G T+I+++H + E + L DR+ I+ QG++ G+P LK FG + + L
Sbjct: 1104 LLK--YRSGRTIIMSTHHMDEADLLGDRIAIIAQGRLYCSGTPLFLKNCFGTGLYLTLVR 1161
Query: 241 PIKNFE 246
+KN +
Sbjct: 1162 KMKNIQ 1167
Score = 127 bits (315), Expect = 2e-28
Identities = 79/229 (34%), Positives = 117/229 (50%), Gaps = 3/229 (1%)
Query: 3 ILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSG 62
IL + +TK +P AV+ + GE G+LG NGAGKTTT +M+ SG
Sbjct: 1937 ILRLHELTKIYPGTSSP--AVDRLCVGVRPGECFGLLGVNGAGKTTTFKMLTGDTTVTSG 1994
Query: 63 EVLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCEDI 122
+ V G + N EV + + Y Q + L+ R+++ Y R RG + +K
Sbjct: 1995 DATVAGKSILTNISEVHQNMGYCPQFDAIDELLTGREHLYLYARLRGVPAEEIEKVANWS 2054
Query: 123 LELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIK 182
++ GL +A S G KR++ A AL PLV LDEPT G+DP+++R W +I
Sbjct: 2055 IKSLGLTVYADCLAGTYSGGNKRKLSTAIALIGCPPLVLLDEPTTGMDPQARRMLWNVIV 2114
Query: 183 EKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFG 231
+ + G V+LTSH + E E L R+ IM +G G+ + LK +FG
Sbjct: 2115 SIIRE-GRAVVLTSHSMEECEALCTRLAIMVKGAFRCMGTIQHLKSKFG 2162
>emb|CAA75729.1| (Y15635) ABCR [Homo sapiens]
Length = 2273
Score = 141 bits (351), Expect = 1e-32
Identities = 83/246 (33%), Positives = 139/246 (55%), Gaps = 4/246 (1%)
Query: 1 MPILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPD 60
+P + VK++ K F + N++F N ++ LG NGAGKTTTL ++ + P
Sbjct: 926 VPGVCVKNLVKIFEPCGRPAVDRLNITFYEN--QITAFLGHNGAGKTTTLSILTGLLPPT 983
Query: 61 SGEVLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCE 120
SG VLV G D + VR+ + Q L L+V +++++Y + +G S+ +A+ E
Sbjct: 984 SGTVLVGGRDIETSLDAVRQSLGMCPQHNILFHHLTVAEHMLFYAQLKGKSQEEAQLEME 1043
Query: 121 DILELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWEL 180
+LE GL +++ LS G++R++ +A A D +V LDEPT+GVDP S+R W+L
Sbjct: 1044 AMLEDTGLHHKRNEEAQDLSGGMQRKLSVAIAFVGDAKVVILDEPTSGVDPYSRRSIWDL 1103
Query: 181 IKEKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFGKTVRIVLEE 240
+ + G T+I+++H + E + L DR+ I+ QG++ G+P LK FG + + L
Sbjct: 1104 LLK--YRSGRTIIMSTHHMDEADLLGDRIAIIAQGRLYCSGTPLFLKNCFGTGLYLTLVR 1161
Query: 241 PIKNFE 246
+KN +
Sbjct: 1162 KMKNIQ 1167
Score = 123 bits (306), Expect = 2e-27
Identities = 74/210 (35%), Positives = 109/210 (51%), Gaps = 1/210 (0%)
Query: 22 AVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSGEVLVDGIDAVKNPLEVRKR 81
AV+ + GE G+LG NGAGKTTT +M+ SG+ V G + N EV +
Sbjct: 1954 AVDRLCVGVRPGECFGLLGVNGAGKTTTFKMLTGDTTVTSGDATVAGKSILTNISEVHQN 2013
Query: 82 IAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCEDILELFGLKTHAHKKPFQLST 141
+ Y Q + L+ R+++ Y R RG + +K ++ GL +A S
Sbjct: 2014 MGYCPQFDAIDELLTGREHLYLYARLRGVPAEEIEKVANWSIKSLGLTVYADCLAGTYSG 2073
Query: 142 GLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIKEKLEDKGVTVILTSHDLYE 201
G KR++ A AL PLV LDEPT G+DP+++R W +I + + G V+LTSH + E
Sbjct: 2074 GNKRKLSTAIALIGCPPLVLLDEPTTGMDPQARRMLWNVIVSIIRE-GRAVVLTSHSMEE 2132
Query: 202 VEYLADRVIIMNQGKIVAEGSPKELKKRFG 231
E L R+ IM +G G+ + LK +FG
Sbjct: 2133 CEALCTRLAIMVKGAFRCMGTIQHLKSKFG 2162
>sp|P78363|ABCR_HUMAN RETINAL-SPECIFIC ATP-BINDING CASSETTE TRANSPORTER (RIM ABC
TRANSPORTER) (RIM PROTEIN) (RMP) (STARGARDT DISEASE
PROTEIN)
Length = 2273
Score = 141 bits (351), Expect = 1e-32
Identities = 83/246 (33%), Positives = 139/246 (55%), Gaps = 4/246 (1%)
Query: 1 MPILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPD 60
+P + VK++ K F + N++F N ++ LG NGAGKTTTL ++ + P
Sbjct: 926 VPGVCVKNLVKIFEPCGRPAVDRLNITFYEN--QITAFLGHNGAGKTTTLSILTGLLPPT 983
Query: 61 SGEVLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCE 120
SG VLV G D + VR+ + Q L L+V +++++Y + +G S+ +A+ E
Sbjct: 984 SGTVLVGGRDIETSLDAVRQSLGMCPQHNILFHHLTVAEHMLFYAQLKGKSQEEAQLEME 1043
Query: 121 DILELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWEL 180
+LE GL +++ LS G++R++ +A A D +V LDEPT+GVDP S+R W+L
Sbjct: 1044 AMLEDTGLHHKRNEEAQDLSGGMQRKLSVAIAFVGDAKVVILDEPTSGVDPYSRRSIWDL 1103
Query: 181 IKEKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFGKTVRIVLEE 240
+ + G T+I+++H + E + L DR+ I+ QG++ G+P LK FG + + L
Sbjct: 1104 LLK--YRSGRTIIMSTHHMDEADLLGDRIAIIAQGRLYCSGTPLFLKNCFGTGLYLTLVR 1161
Query: 241 PIKNFE 246
+KN +
Sbjct: 1162 KMKNIQ 1167
Score = 127 bits (315), Expect = 2e-28
Identities = 79/229 (34%), Positives = 117/229 (50%), Gaps = 3/229 (1%)
Query: 3 ILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSG 62
IL + +TK +P AV+ + GE G+LG NGAGKTTT +M+ SG
Sbjct: 1937 ILRLHELTKIYPGTSSP--AVDRLCVGVRPGECFGLLGVNGAGKTTTFKMLTGDTTVTSG 1994
Query: 63 EVLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCEDI 122
+ V G + N EV + + Y Q + L+ R+++ Y R RG + +K
Sbjct: 1995 DATVAGKSILTNISEVHQNMGYCPQFDAIDELLTGREHLYLYARLRGVPAEEIEKVANWS 2054
Query: 123 LELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIK 182
++ GL +A S G KR++ A AL PLV LDEPT G+DP+++R W +I
Sbjct: 2055 IKSLGLTVYADCLAGTYSGGNKRKLSTAIALIGCPPLVLLDEPTTGMDPQARRMLWNVIV 2114
Query: 183 EKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFG 231
+ + G V+LTSH + E E L R+ IM +G G+ + LK +FG
Sbjct: 2115 SIIRE-GRAVVLTSHSMEECEALCTRLAIMVKGAFRCMGTIQHLKSKFG 2162
>gb|AAF49312.2| (AE003523) CG6052 gene product [Drosophila melanogaster]
Length = 1660
Score = 141 bits (351), Expect = 1e-32
Identities = 73/215 (33%), Positives = 124/215 (56%), Gaps = 3/215 (1%)
Query: 18 GEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSGEVLVDGIDAVKNPLE 77
G++ AV +S + E+ +LG NGAGKTTT+ MI I +P SG +V+G D + +
Sbjct: 485 GKLKAVKGISLKMHRNEITVLLGHNGAGKTTTINMITGIVKPTSGTAIVNGYDIRTHLAK 544
Query: 78 VRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGF-SKRDAKKHCEDILELFGLKTHAHKKP 136
R+ + Q L +SVRD+II++ + +G + + + + L+ ++
Sbjct: 545 ARESLGICPQNNILFKEMSVRDHIIFFSKLKGIRGTKAVENEVGKYMTMLKLQDKSYVAA 604
Query: 137 FQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIKEKLEDKGVTVILTS 196
LS G+KR++ L CAL + +V DEP++G+D +R W+L++ E G T++LT+
Sbjct: 605 KNLSGGMKRKLSLCCALCGNAKVVLCDEPSSGIDAAGRRSLWDLLQS--EKDGRTILLTT 662
Query: 197 HDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFG 231
H + E + L DR+ I+++GK+ +G+ LKKRFG
Sbjct: 663 HYMDEADVLGDRIAILSEGKLQCQGTSFYLKKRFG 697
Score = 125 bits (312), Expect = 5e-28
Identities = 78/253 (30%), Positives = 137/253 (53%), Gaps = 10/253 (3%)
Query: 1 MPILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPD 60
+P+L K ++K++ + +AV +SF E G+LG NGAGKT+T +M+A +
Sbjct: 1294 VPLLVYK-ISKRYRSK----LAVKAISFHVPHAECFGLLGINGAGKTSTFKMLAGDEKIT 1348
Query: 61 SGEVLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCE 120
SGE +DG + + +V ++I Y Q L L+ R+ + Y RG +R C
Sbjct: 1349 SGEAYIDGTNISTH--KVYRKIGYCPQFDALFEDLTGRETLNIYCLLRGVQRRHVTPICW 1406
Query: 121 DILELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWEL 180
+ FG H K+ S G +R++ A ++ + +++LDEPT+G+DP ++R+ W++
Sbjct: 1407 GLAISFGFAKHMDKQTKHYSGGNRRKLSTAISVLGNPSVLYLDEPTSGMDPAARRQLWQI 1466
Query: 181 IKEKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFGK--TVRIVL 238
I + G +++LTSH + E E L R+ IM G+ GS + LK +F K +++ +
Sbjct: 1467 I-GLIRTAGKSIVLTSHSMDECEALCSRLAIMVDGEFKCLGSVQSLKNQFSKGLILKVKV 1525
Query: 239 EEPIKNFELLKEE 251
+ K F+ + E+
Sbjct: 1526 KHKKKTFQRVVED 1538
>gi|11421340 ATP-binding cassette, sub-family A member 4 [Homo sapiens]
Length = 2300
Score = 141 bits (351), Expect = 1e-32
Identities = 83/246 (33%), Positives = 139/246 (55%), Gaps = 4/246 (1%)
Query: 1 MPILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPD 60
+P + VK++ K F + N++F N ++ LG NGAGKTTTL ++ + P
Sbjct: 953 VPGVCVKNLVKIFEPCGRPAVDRLNITFYEN--QITAFLGHNGAGKTTTLSILTGLLPPT 1010
Query: 61 SGEVLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCE 120
SG VLV G D + VR+ + Q L L+V +++++Y + +G S+ +A+ E
Sbjct: 1011 SGTVLVGGRDIETSLDAVRQSLGMCPQHNILFHHLTVAEHMLFYAQLKGKSQEEAQLEME 1070
Query: 121 DILELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWEL 180
+LE GL +++ LS G++R++ +A A D +V LDEPT+GVDP S+R W+L
Sbjct: 1071 AMLEDTGLHHKRNEEAQDLSGGMQRKLSVAIAFVGDAKVVILDEPTSGVDPYSRRSIWDL 1130
Query: 181 IKEKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFGKTVRIVLEE 240
+ + G T+I+++H + E + L DR+ I+ QG++ G+P LK FG + + L
Sbjct: 1131 LLK--YRSGRTIIMSTHHMDEADLLGDRIAIIAQGRLYCSGTPLFLKNCFGTGLYLTLVR 1188
Query: 241 PIKNFE 246
+KN +
Sbjct: 1189 KMKNIQ 1194
Score = 127 bits (315), Expect = 2e-28
Identities = 79/229 (34%), Positives = 117/229 (50%), Gaps = 3/229 (1%)
Query: 3 ILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSG 62
IL + +TK +P AV+ + GE G+LG NGAGKTTT +M+ SG
Sbjct: 1964 ILRLHELTKIYPGTSSP--AVDRLCVGVRPGECFGLLGVNGAGKTTTFKMLTGDTTVTSG 2021
Query: 63 EVLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCEDI 122
+ V G + N EV + + Y Q + L+ R+++ Y R RG + +K
Sbjct: 2022 DATVAGKSILANISEVHQNMGYCPQFDAIDELLTGREHLYLYARLRGVPAEEIEKVANWS 2081
Query: 123 LELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIK 182
++ GL +A S G KR++ A AL PLV LDEPT G+DP+++R W +I
Sbjct: 2082 IKSLGLTVYADCLAGTYSGGNKRKLSTAIALIGCPPLVLLDEPTTGMDPQARRMLWNVIV 2141
Query: 183 EKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFG 231
+ + G V+LTSH + E E L R+ IM +G G+ + LK +FG
Sbjct: 2142 SIIRE-GRAVVLTSHSMEECEALCTRLAIMVKGAFRCMGTIQHLKSKFG 2189
>gi|11431125 ATP-binding cassette, sub-family A member 3 [Homo sapiens]
Length = 1704
Score = 141 bits (351), Expect = 1e-32
Identities = 85/314 (27%), Positives = 171/314 (54%), Gaps = 10/314 (3%)
Query: 4 LEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSGE 63
+++K ++K F + AV +++ + G++ +LG NGAGKTTTL M+ ++ P SG
Sbjct: 530 IKIKHLSKVFRVGNKDRAAVRDLNLNLYEGQITVLLGHNGAGKTTTLSMLTGLFPPTSGR 589
Query: 64 VLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCEDIL 123
+ G + ++ +++RK + Q L L+V +++ +Y + +G S++ + + +L
Sbjct: 590 AYISGYEISQDMVQIRKSLGLCPQHDILFDNLTVAEHLYFYAQLKGLSRQKCPEEVKQML 649
Query: 124 ELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIKE 183
+ GL+ + + LS G++R++ + AL + ++ LDEPT+G+D S+R W+L++
Sbjct: 650 HIIGLEDKWNSRSRFLSGGMRRKLSIGIALIAGSKVLILDEPTSGMDAISRRAIWDLLQR 709
Query: 184 KLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFGKTVRIVL-EEPI 242
+ D+ T++LT+H + E + L DR+ IM +G++ GS LK+++G + L +EP
Sbjct: 710 QKSDR--TIVLTTHFMDEADLLGDRIAIMAKGELQCCGSSLFLKQKYGAGYHMTLVKEPH 767
Query: 243 KNFELLKEELLRVKNVKDVRLARDDSFDVYFKSLDDSINGILQVISPQELKIKDIFTAT- 301
N E + + L +V + L ++ F +S + + + E K K++ A+
Sbjct: 768 CNPEDISQ--LVHHHVPNATLESSAGAELSFILPRESTHRFEGLFAKLEKKQKELGIASF 825
Query: 302 ----ANFEDVYLEI 311
E+V+L +
Sbjct: 826 GASITTMEEVFLRV 839
Score = 134 bits (335), Expect = 1e-30
Identities = 79/228 (34%), Positives = 125/228 (54%), Gaps = 2/228 (0%)
Query: 4 LEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSGE 63
L +K ++K + + ++AV+ +S + GE G+LG NGAGKTTT +M+ SG+
Sbjct: 1381 LIIKELSKVYEQ-RVPLLAVDRLSLAVQKGECFGLLGFNGAGKTTTFKMLTGEESLTSGD 1439
Query: 64 VLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCEDIL 123
V G + +VR+RI Y Q L ++ R+ ++ Y R RG +R E+ L
Sbjct: 1440 AFVGGHRISSDVGKVRQRIGYCPQFDALLDHMTGREMLVMYARLRGIPERHIGACVENTL 1499
Query: 124 ELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIKE 183
L+ HA+K S G KR++ AL + ++FLDEP+ G+DP ++R W+ +
Sbjct: 1500 RGLLLEPHANKLVRTYSGGNKRKLSTGIALIGEPAVIFLDEPSTGMDPVARRLLWDTV-A 1558
Query: 184 KLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFG 231
+ + G +I+TSH + E E L R+ IM QG+ GSP+ LK +FG
Sbjct: 1559 RARESGKAIIITSHSMEECEALCTRLAIMVQGQFKCLGSPQHLKSKFG 1606
>sp|P26050|NODI_BRAJA NODULATION ATP-BINDING PROTEIN I >gi|281683|pir||S27496 nodI
protein - Bradyrhizobium japonicum
>gi|152117|gb|AAA26229.1| (J03685) nodI gene product
[Bradyrhizobium japonicum]
Length = 306
Score = 140 bits (350), Expect = 2e-32
Identities = 79/223 (35%), Positives = 125/223 (55%), Gaps = 5/223 (2%)
Query: 4 LEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSGE 63
+++ V K F G+ + VN++SFS GE G+LGPNGAGK+T RM+ + PD G+
Sbjct: 8 IDLVGVRKSF----GDKVIVNDLSFSVARGECFGLLGPNGAGKSTIARMLLGMISPDRGK 63
Query: 64 VLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCEDIL 123
+ V R + + Q +L P +VR+ ++ + R+ G S R + +L
Sbjct: 64 ITVLDEPVPSRARAARVAVGVVPQFDNLEPEFTVRENLLVFGRYFGMSARTIEAVVPSLL 123
Query: 124 ELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIKE 183
E L++ A + LS G+KRR+ LA AL +D L+ +DEPT G+DP ++ WE ++
Sbjct: 124 EFARLESKADVRVSLLSGGMKRRLTLARALINDPHLLVMDEPTTGLDPHARHLIWERLRA 183
Query: 184 KLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKEL 226
L +G T++LT+H + E E L DR+ ++ G +AEG P L
Sbjct: 184 LLA-RGKTILLTTHFMEEAERLCDRLCVLESGCKIAEGKPDAL 225
>prf||1914270A nodulation protein [Bradyrhizobium japonicum]
Length = 306
Score = 140 bits (350), Expect = 2e-32
Identities = 79/223 (35%), Positives = 125/223 (55%), Gaps = 5/223 (2%)
Query: 4 LEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSGE 63
+++ V K F G+ + VN++SFS GE G+LGPNGAGK+T RM+ + PD G+
Sbjct: 8 IDLVGVRKSF----GDKVIVNDLSFSVARGECFGLLGPNGAGKSTIARMLLGMISPDRGK 63
Query: 64 VLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCEDIL 123
+ V R + + Q +L P +VR+ ++ + R+ G S R + +L
Sbjct: 64 ITVLDEPVPSRARAARVAVGVVPQFDNLEPEFTVRENLLVFGRYFGMSARTIEAVVPSLL 123
Query: 124 ELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIKE 183
E L++ A + LS G+KRR+ LA AL +D L+ +DEPT G+DP ++ WE ++
Sbjct: 124 EFARLESKADVRVSLLSGGMKRRLTLARALINDPHLLVMDEPTTGLDPHARHLIWERLRA 183
Query: 184 KLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKEL 226
L +G T++LT+H + E E L DR+ ++ G +AEG P L
Sbjct: 184 LLA-RGKTILLTTHFMEEAERLCDRLCVLESGCKIAEGKPDAL 225
>dbj|BAB04164.1| (AP001508) ABC transporter (ATP-binding protein) [Bacillus
halodurans]
Length = 306
Score = 140 bits (350), Expect = 2e-32
Identities = 89/309 (28%), Positives = 162/309 (51%), Gaps = 16/309 (5%)
Query: 3 ILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSG 62
++E ++T + V AV+ ++ GE+ G LGPNGAGKTTT+RM+ + + G
Sbjct: 7 LIETNNLTMTYK----HVHAVDRINLKVKEGEIYGFLGPNGAGKTTTIRMLLGLIKASHG 62
Query: 63 EVLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCEDI 122
+ + G D ++ L++ K I + + P P LS D + + + K ++
Sbjct: 63 SIKIFGKDLKQHRLDILKNIGALVESPSYYPHLSGEDNLETVRKI----VKVPKSRIAEV 118
Query: 123 LELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIK 182
LEL L A +K + S G+K+R+ +A AL ++ LV LDEPT G+DP + LI
Sbjct: 119 LELVRLTKVADRKVQEYSLGMKQRLAIAAALLANPRLVILDEPTNGLDPAGIIEIRNLIL 178
Query: 183 EKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFGKTVRIVLEEPI 242
++ G+TV+L+SH L EVE +A +V I+ +GK++ + S +EL+K+ + + + P
Sbjct: 179 RLPKEYGITVLLSSHLLSEVEQVASQVGIIAKGKLIFQDSIEELRKKANRKIFLSTSHPE 238
Query: 243 KNFELLKEELLRVKNVKDVRLARDDSFDVYFKSLDDSINGILQVISPQELKIKDIFTATA 302
+L+E + V + D S D+ I +++ +++ + I T+
Sbjct: 239 VAATILQERGINVDTQARGLVMNDRS--------DEEIAQLVKAFVEKDIDVYRISDETS 290
Query: 303 NFEDVYLEI 311
+ E+++L++
Sbjct: 291 SLEEIFLQL 299
>dbj|BAB04537.1| (AP001509) bacitracin ABC transporter (ATP-binding protein)
[Bacillus halodurans]
Length = 314
Score = 140 bits (350), Expect = 2e-32
Identities = 88/311 (28%), Positives = 164/311 (52%), Gaps = 13/311 (4%)
Query: 3 ILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSG 62
++ +++TK F +G+ I ++N++ N GE+ G LGPNGAGKTT ++M+ +P +G
Sbjct: 4 VITTRNLTKTF---QGKEI-ISNLNLHVNKGEIYGFLGPNGAGKTTVMKMLMNFVKPSAG 59
Query: 63 EVLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCEDI 122
E+ + G E+ KRI M + P LS R+ + + + G+ K A E+
Sbjct: 60 EIELFGQRLTSQSYEMLKRIGSMIEFPIFYEKLSARENLELHCEYMGYYKPSA---IEEA 116
Query: 123 LELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIK 182
LE+ L+ K S G+K+R+ +A A+ + L+ LDEP G+DP ++ +L +
Sbjct: 117 LEMVKLQLTGSKAVKDFSLGMKQRLGIARAICTKPELLILDEPINGLDPVGIKEIRQLFQ 176
Query: 183 EKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFGKTVRIVLEEPI 242
+ GVT++++SH L E+E +AD V ++ G +VAE + +++ + + + ++ +
Sbjct: 177 TLCNEYGVTILISSHILSEIEQIADTVGVIRNGMLVAEVALDDIRSQQTEYIELLTYDAR 236
Query: 243 KNFELLKEELLRVKNVKDVRLARDDSFDVYFKSLDDSINGILQVISPQELKIKDIFTATA 302
K +L EL +K+V+L +Y L N + + + ++ I+ I
Sbjct: 237 KALYVLDNEL----GLKNVKLMDQSLIRIYDHHLTQ--NQLSKTLISNDVNIEAIARKNH 290
Query: 303 NFEDVYLEIIE 313
+ ED ++ +IE
Sbjct: 291 SLEDYFMNLIE 301
>gb|AAC72253.1| (U91581) LctF [Lactococcus lactis subsp. lactis]
Length = 306
Score = 140 bits (349), Expect = 2e-32
Identities = 100/312 (32%), Positives = 166/312 (53%), Gaps = 22/312 (7%)
Query: 3 ILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSG 62
ILE K ++KKF G+ +V N++ S G++ G LGPNGAGK+TT++MI + P G
Sbjct: 6 ILETKKLSKKF----GKEYSVRNLTISVKKGDIFGFLGPNGAGKSTTMKMILGLLHPTEG 61
Query: 63 EVLVDGI---DAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHC 119
EV V G ++VKN V K + + +EP P LS + + + + +K
Sbjct: 62 EVKVFGKKLDNSVKN--SVLKDVGCLIEEPSFYPNLSGLENLKLVQKLLNLPYHNIEK-- 117
Query: 120 EDILELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWE 179
+L + L+ +K S G+K+R+ +A AL L+ LDEPT G+DP R+ E
Sbjct: 118 --VLNIVKLEDQKNKLVKNYSLGMKQRLGIALALIKFPKLLILDEPTNGLDPTGIREIRE 175
Query: 180 LIKEKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFGKTVRIVLE 239
LIK E G+TV+++SH L E+E +A+ V I+ +G+++ EG +L+++ I
Sbjct: 176 LIKSLPEKYGITVLISSHLLSEIEQIANTVAIIKKGELLYEGELSKLEEQ--PIFEIQTN 233
Query: 240 EPIKNFELLKEELLRVKNVKDVRLARDDSFDVYFKSLDDSINGILQVISPQELKIKDIFT 299
++FE+L+ VK +D+ + L+ I ++S Q++KI + +
Sbjct: 234 LINQSFEVLQGLGYTVKK------QSNDTIQIMNSDLNKRAAAIEALVS-QQIKIYEAKS 286
Query: 300 ATANFEDVYLEI 311
T N E V++E+
Sbjct: 287 VTKNLEQVFIEM 298
>gb|AAC61484.1| (AF082738) ABC transporter ATP-binding protein [Streptococcus
pyogenes]
Length = 296
Score = 140 bits (349), Expect = 2e-32
Identities = 85/253 (33%), Positives = 147/253 (57%), Gaps = 6/253 (2%)
Query: 3 ILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSG 62
I+E+K VT + + E ++ VSF GE L I+G NG+GK+TT+R+I + P+SG
Sbjct: 21 IIELKKVTFNYHKDQ-EKPTLDGVSFHVKQGEWLSIIGHNGSGKSTTIRLIDGLLEPESG 79
Query: 63 EVLVDG-IDAVKNPLEVRKRIAYMTQEPDLT-PPLSVRDYIIYYFRFRGFSKRDAKKHCE 120
++VDG + + N E+R +I + Q PD +V D + + +G + D K+
Sbjct: 80 SIIVDGDLLTITNVWEIRHKIGMVFQNPDNQFVGATVEDDVAFGLENKGIAHEDIKERVN 139
Query: 121 DILELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWEL 180
LEL G++ K+P +LS G K+RV +A A++ ++ LDE T+ +DP+ + + +
Sbjct: 140 HALELVGMQNFKEKEPARLSGGQKQRVAIAGAVAMKPKIIILDEATSMLDPKGRLELIKT 199
Query: 181 IKEKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFGKTVRIVLEE 240
IK +D +TVI +HDL EV L+DRV++M G++ + +P++L R + +++ L+
Sbjct: 200 IKNIRDDYQLTVISITHDLDEVA-LSDRVLVMKDGQVESTSTPEQLFARGDELLQLGLDI 258
Query: 241 PIKN--FELLKEE 251
P ++L+EE
Sbjct: 259 PFTTSVVQMLQEE 271
>pir||H75077 abc transporter, ATP-binding protein PAB1696 - Pyrococcus abyssi
(strain Orsay) >gi|5458437|emb|CAB49925.1| (AJ248286)
ABC transporter, ATP-binding protein [Pyrococcus abyssi]
Length = 253
Score = 140 bits (349), Expect = 2e-32
Identities = 81/250 (32%), Positives = 146/250 (58%), Gaps = 8/250 (3%)
Query: 6 VKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSGEVL 65
V+++ K+F G + +SF+ GE+ G+LGPNG+GK+TT+R+++ I G+V+
Sbjct: 4 VENLRKRF----GGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVI 59
Query: 66 VDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCEDILEL 125
V G++ K+PL+V++ + Y+ + P L L+ ++ + RG K ++ ++E
Sbjct: 60 VGGVEVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEA 119
Query: 126 FGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIKEKL 185
F +K + ++ LS G K+++ L +L D ++ LDE G+DP+S R EL+ E
Sbjct: 120 FEIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYE-F 178
Query: 186 EDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFGKTVRIVLEEPIKNF 245
+++G +++ ++H L E + DRV I+ QG+I+AEG+ +ELK+ K R LE+
Sbjct: 179 KEEGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKE-ISKEER--LEDVFLKL 235
Query: 246 ELLKEELLRV 255
KEE+ +V
Sbjct: 236 TQAKEEIAQV 245
>gb|AAF73520.1| (AE002271) ABC transporter, ATP-binding protein [Chlamydia
muridarum]
Length = 239
Score = 140 bits (349), Expect = 2e-32
Identities = 79/228 (34%), Positives = 129/228 (55%), Gaps = 7/228 (3%)
Query: 1 MPILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPD 60
M +L V ++ K++ + N+VSF N+GE++G+LGPNGAGKTT + RPD
Sbjct: 1 MSVLSVCNLIKRY----NKKPVTNDVSFQVNAGEIVGLLGPNGAGKTTAFYQTVGLIRPD 56
Query: 61 SGEVLVDGIDAVKNPLEVRKR--IAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKH 118
SG++L D K P++ R R I Y+ QEP + L+V++ +I ++++
Sbjct: 57 SGKILFKNTDITKKPMDYRARLGIGYLAQEPTIFKELTVKENLICVLEIIYKTRKEQTHL 116
Query: 119 CEDILELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTW 178
+++ L T HKK LS G +RR+++AC L+ + ++ LDEP A VDP +
Sbjct: 117 LNALIDDLQLTTSLHKKAGSLSGGERRRLEIACVLALNPSVLLLDEPFANVDPLVIQNVK 176
Query: 179 ELIKEKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKEL 226
LIK L +G+ +++T H+ E+ +ADR ++ GKI EGS ++
Sbjct: 177 YLIK-ILASRGIGILITDHNAKELLSIADRCYLIIDGKIFFEGSSAQM 223
>emb|CAC08315.1| (AL392149) putative ABC transport system ATP-binding protein
[Streptomyces coelicolor A3(2)]
Length = 336
Score = 140 bits (349), Expect = 2e-32
Identities = 87/297 (29%), Positives = 157/297 (52%), Gaps = 7/297 (2%)
Query: 18 GEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSGEVLVDGIDAVKNPLE 77
G+ A++ + G V G+LGPNGAGKTT +R+++T+ R D G V G+D + E
Sbjct: 17 GDKRALDGFDLTVREGTVHGLLGPNGAGKTTAVRILSTLIRLDGGRAEVAGLDIARQARE 76
Query: 78 VRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCEDILELFGLKTHAHKKPF 137
VR RI Q + L+ R + + R R A+ ++LE F L A +
Sbjct: 77 VRARIGLTGQYAAVDEVLTGRQNLEMFGRLFHLGGRRARARAVELLEQFDLTDAADRGVG 136
Query: 138 QLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIKEKLEDKGVTVILTSH 197
+ S G++RR+ LA ++ ++FLDEPT G+DPRS+ + WE ++E L G TV+LT+
Sbjct: 137 KYSGGMRRRLDLAASMILAPSVLFLDEPTTGLDPRSRGEVWESVRE-LVASGTTVLLTTQ 195
Query: 198 DLYEVEYLADRVIIMNQGKIVAEGSPKELKKRF-GKTVRIVLEEPIKNFELLKEELLRVK 256
L E + LA R+ ++++G+ +A+ +P LK G + +V+ + + ++K K
Sbjct: 196 YLEEADKLASRITVIDRGRAIADDTPDGLKNLVGGDRIEVVVADHAEIPRVVKTVARVCK 255
Query: 257 NVKDVRLARDDSFDVYFKSLD--DSINGILQVISPQELKIKDIFTATANFEDVYLEI 311
+V +++ V+ D ++ + + + + + ++DI + +DV+L +
Sbjct: 256 GEPEV---EEEALRVHAPVTDRVPALTEVARTLQDEGVAVEDIGLRRPSLDDVFLRL 309
>gb|AAK41557.1| Antibiotic ABC transporter, ATP binding protein [Sulfolobus
solfataricus]
Length = 297
Score = 139 bits (348), Expect = 3e-32
Identities = 86/310 (27%), Positives = 170/310 (54%), Gaps = 16/310 (5%)
Query: 3 ILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSG 62
++ V ++ KK+ G IA++NVS E + ++GPNGAGKTT +R++ T+ +PD G
Sbjct: 1 MIVVSNIVKKY----GNKIALDNVSLEVKKREFVSLIGPNGAGKTTLIRILLTLMKPDRG 56
Query: 63 EVLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCEDI 122
EV + G + K+ + K + Y+ + P+ P L+ + + + RG K + + +
Sbjct: 57 EVQILGENPFKSK-RIFKEVGYVQEIPNYPPFLTGKQVLELSAKIRGVDKSEVNR----V 111
Query: 123 LELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIK 182
LE ++ +A+ + S G+ +R+ +A AL + ++ +DEP G+DP KT EL+
Sbjct: 112 LEFVEMENYANNPIVKYSKGMVQRIAIAEALLGNPSILIMDEPNMGIDPIFSLKTRELLN 171
Query: 183 EKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFGKTVRIVLEEPI 242
+ V++++TSH+L +V+ L+DR+ ++ +GKIV G+ +++ K F + ++ +
Sbjct: 172 KLKRKDNVSILMTSHELEDVKKLSDRIFMIYKGKIVFSGTVEDMVKEF-----LGIQVVV 226
Query: 243 KNFELLKEELLRVKNVKDVRLARDDSFDVYFKSLDDSINGILQVISPQELKIKDIFTATA 302
+ E+ K E + +K ++ V+ +D + K +D +L+ + +K+K F
Sbjct: 227 ETDEIEKAEGV-LKGIEYVKGIFNDGNRLIAKLNEDRREELLKDLVTSGVKVKG-FYIDL 284
Query: 303 NFEDVYLEII 312
N E+ Y+ +
Sbjct: 285 NLEEAYMRAL 294
>pir||S60124 transport protein homolog C48B4.4 - Caenorhabditis elegans
Length = 1767
Score = 139 bits (348), Expect = 3e-32
Identities = 95/315 (30%), Positives = 160/315 (50%), Gaps = 18/315 (5%)
Query: 4 LEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSGE 63
L +K +TK F G AVN + + + E G+LG NGAGKTTT ++ SGE
Sbjct: 1442 LVIKDLTKTF----GRFTAVNELCLAVDQKECFGLLGVNGAGKTTTFNILTGQSFASSGE 1497
Query: 64 VLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCEDIL 123
++ G D + I Y Q L L+ R+ + + GF AK E IL
Sbjct: 1498 AMIGGRDVTE-----LISIGYCPQFDALMLDLTGRESLEILAQMHGFENYKAK--AELIL 1550
Query: 124 ELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIKE 183
E G+ HA K S G KR++ + AL + ++ LDEPTAG+DP+++R+ WEL+
Sbjct: 1551 ECVGMIAHADKLVRFYSGGQKRKISVGVALLAPTQMIILDEPTAGIDPKARREVWELLLW 1610
Query: 184 KLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFGK--TVRIVLEEP 241
E ++LTSH + E E L R+ ++N+G ++A GS +ELK +G T+ + L EP
Sbjct: 1611 CREHSNSALMLTSHSMDECEALCSRIAVLNRGSLIAIGSSQELKSLYGNNYTMTLSLYEP 1670
Query: 242 IKNFELLKEELLRVKNVKDVRLARDDSFDVYF---KSLDDSINGILQVIS--PQELKIKD 296
+ +++ R+ N + + + ++ + K +D + +++ ++L +KD
Sbjct: 1671 NQRDMVVQLVQTRLPNSVLKTTSTNKTLNLKWQIPKEKEDCWSAKFEMVQALAKDLGVKD 1730
Query: 297 IFTATANFEDVYLEI 311
A ++ E+ +L +
Sbjct: 1731 FILAQSSLEETFLRL 1745
Score = 132 bits (328), Expect = 6e-30
Identities = 75/210 (35%), Positives = 122/210 (57%), Gaps = 2/210 (0%)
Query: 22 AVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSGEVLVDGIDAVKNPLEVRKR 81
AV+ +S A G+ +LG NGAGK+TT IA I RP +G + + G D P E R+
Sbjct: 627 AVDGLSLRAVRGQCSILLGHNGAGKSTTFSSIAGIIRPTNGRITICGYDVGNEPGETRRH 686
Query: 82 IAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCEDILELFGLKTHAHKKPFQLST 141
I Q L L+V +++ + +G ++D K+ + +L L ++K LS
Sbjct: 687 IGMCPQYNPLYDQLTVSEHLKLVYGLKGAREKDFKQDMKRLLSDVKLDFKENEKAVNLSG 746
Query: 142 GLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIKEKLEDKGVTVILTSHDLYE 201
G+KR++ + AL D +V LDEPTAG+DP +++ +L++ + ++ T++LT+H + E
Sbjct: 747 GMKRKLCVCMALIGDSEVVLLDEPTAGMDPGARQDVQKLVEREKANR--TILLTTHYMDE 804
Query: 202 VEYLADRVIIMNQGKIVAEGSPKELKKRFG 231
E L D V IM+ GK+VA G+ + LK++FG
Sbjct: 805 AERLGDWVFIMSHGKLVASGTNQYLKQKFG 834
>pir||T42749 ATP-binding cassette transport protein homolog - Caenorhabditis
elegans >gi|3172341|gb|AAC24116.1| (AF049142) ATP-binding
cassette transporter [Caenorhabditis elegans]
Length = 1704
Score = 139 bits (348), Expect = 3e-32
Identities = 95/315 (30%), Positives = 160/315 (50%), Gaps = 18/315 (5%)
Query: 4 LEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSGE 63
L +K +TK F G AVN + + + E G+LG NGAGKTTT ++ SGE
Sbjct: 1379 LVIKDLTKTF----GRFTAVNELCLAVDQKECFGLLGVNGAGKTTTFNILTGQSFASSGE 1434
Query: 64 VLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCEDIL 123
++ G D + I Y Q L L+ R+ + + GF AK E IL
Sbjct: 1435 AMIGGRDVTE-----LISIGYCPQFDALMLDLTGRESLEILAQMHGFENYKAK--AELIL 1487
Query: 124 ELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIKE 183
E G+ HA K S G KR++ + AL + ++ LDEPTAG+DP+++R+ WEL+
Sbjct: 1488 ECVGMIAHADKLVRFYSGGQKRKISVGVALLAPTQMIILDEPTAGIDPKARREVWELLLW 1547
Query: 184 KLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFGK--TVRIVLEEP 241
E ++LTSH + E E L R+ ++N+G ++A GS +ELK +G T+ + L EP
Sbjct: 1548 CREHSNSALMLTSHSMDECEALCSRIAVLNRGSLIAIGSSQELKSLYGNNYTMTLSLYEP 1607
Query: 242 IKNFELLKEELLRVKNVKDVRLARDDSFDVYF---KSLDDSINGILQVIS--PQELKIKD 296
+ +++ R+ N + + + ++ + K +D + +++ ++L +KD
Sbjct: 1608 NQRDMVVQLVQTRLPNSVLKTTSTNKTLNLKWQIPKEKEDCWSAKFEMVQALAKDLGVKD 1667
Query: 297 IFTATANFEDVYLEI 311
A ++ E+ +L +
Sbjct: 1668 FILAQSSLEETFLRL 1682
Score = 132 bits (328), Expect = 6e-30
Identities = 75/210 (35%), Positives = 122/210 (57%), Gaps = 2/210 (0%)
Query: 22 AVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSGEVLVDGIDAVKNPLEVRKR 81
AV+ +S A G+ +LG NGAGK+TT IA I RP +G + + G D P E R+
Sbjct: 562 AVDGLSLRAVRGQCSILLGHNGAGKSTTFSSIAGIIRPTNGRITICGYDVGNEPGETRRH 621
Query: 82 IAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCEDILELFGLKTHAHKKPFQLST 141
I Q L L+V +++ + +G ++D K+ + +L L ++K LS
Sbjct: 622 IGMCPQYNPLYDQLTVSEHLKLVYGLKGAREKDFKQDMKRLLSDVKLDFKENEKAVNLSG 681
Query: 142 GLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIKEKLEDKGVTVILTSHDLYE 201
G+KR++ + AL D +V LDEPTAG+DP +++ +L++ + ++ T++LT+H + E
Sbjct: 682 GMKRKLCVCMALIGDSEVVLLDEPTAGMDPGARQDVQKLVEREKANR--TILLTTHYMDE 739
Query: 202 VEYLADRVIIMNQGKIVAEGSPKELKKRFG 231
E L D V IM+ GK+VA G+ + LK++FG
Sbjct: 740 AERLGDWVFIMSHGKLVASGTNQYLKQKFG 769
>pir||C72044 ABC transporter ATPase - Chlamydophila pneumoniae (strain CWL029)
>gi|4377027|gb|AAD18862.1| (AE001653) ABC Transporter
ATPase [Chlamydophila pneumoniae CWL029]
>gi|8163348|gb|AAF73617.1| (AE002166) ABC transporter,
ATP-binding protein [Chlamydophila pneumoniae AR39]
>gi|8979095|dbj|BAA98930.1| (AP002547) ABC transporter
ATPase [Chlamydophila pneumoniae J138]
Length = 240
Score = 139 bits (348), Expect = 3e-32
Identities = 80/228 (35%), Positives = 129/228 (56%), Gaps = 7/228 (3%)
Query: 1 MPILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPD 60
MPIL V ++ KK+ + N+VSF N GE++G+LGPNGAGKTT + + RPD
Sbjct: 1 MPILSVCNLVKKY----NKKPVTNDVSFQINPGEIVGLLGPNGAGKTTAFYLTVGLIRPD 56
Query: 61 SGEVLVDGIDAVKNPLEVRKR--IAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKH 118
SG+++ +D K ++ R R I Y+ QEP + L+V+D +I +++
Sbjct: 57 SGKIIFKNVDVTKKTMDHRARLGIGYLAQEPTIFKELTVQDNLICILEIIYKARKQQSHL 116
Query: 119 CEDILELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTW 178
+++ L + HKK LS G +RR+++AC L+ + ++ LDEP A VDP +
Sbjct: 117 LNTLVDDLQLGSCLHKKAGTLSGGERRRLEIACVLALNPSVLLLDEPFANVDPLVIQNVK 176
Query: 179 ELIKEKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKEL 226
LIK L +G+ +++T H+ E+ +ADR ++ GKI EGS ++
Sbjct: 177 YLIK-ILAGRGIGILITDHNAKELLSIADRCYLIIDGKIFFEGSSSQM 223
>pir||T07713 probable ABC-type transport protein T23J7.70 - Arabidopsis thaliana
>gi|4741191|emb|CAB41857.1| (AL049746) ABC
transporter-like protein [Arabidopsis thaliana]
Length = 925
Score = 139 bits (348), Expect = 3e-32
Identities = 93/299 (31%), Positives = 158/299 (52%), Gaps = 16/299 (5%)
Query: 22 AVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSGEVLVDGIDAVKNPLEVRKR 81
AV +S + SGE G+LGPNGAGKT+ + M+ + +P SG V G+D K+ V
Sbjct: 623 AVRVLSLAVPSGECFGMLGPNGAGKTSFINMMTGLVKPTSGAAFVQGLDICKDMDRVYTS 682
Query: 82 IAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCEDILELFGL--KTHAHKKPFQL 139
+ Q L L+ R+++++Y R + D + E+ L L A K +
Sbjct: 683 MGVCPQHDLLWETLTGREHLLFYGRLKNLKGVDLNQAVEESLRSVNLFHGGVADKPAGKY 742
Query: 140 STGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIKEKLEDKGVTVILTSHDL 199
S G+KRR+ +A +L + +V++DEP+ G+DP S++ W +IK + +ILT+H +
Sbjct: 743 SGGMKRRLSVAISLIGNPKVVYMDEPSTGLDPASRKNLWTVIKN--AKRHTAIILTTHSM 800
Query: 200 YEVEYLADRVIIMNQGKIVAEGSPKELKKRFGKTVRIVL---EEPIKNFELLKEELLRVK 256
E E+L DR+ I G++ G+PKELK R+G + + + E K+ E+L +E+
Sbjct: 801 EEAEFLCDRLGIFVDGRLQCIGNPKELKGRYGGSYVLTMTTSSEHEKDVEMLVQEV--SP 858
Query: 257 NVKDV-RLARDDSFDVYFKSLDDSINGILQVISPQELKIKDIFT---ATANFEDVYLEI 311
NVK + +A F++ + I+ + QV+ + K +F A EDV++++
Sbjct: 859 NVKKIYHIAGTQKFEI--PKDEVRISEVFQVVEKAKSNFK-VFAWGLADTTLEDVFIKV 914
>sp|P34358|YLH4_CAEEL PUTATIVE ABC TRANSPORTER C48B4.4 IN CHROMOSOME III
Length = 1758
Score = 139 bits (348), Expect = 3e-32
Identities = 95/315 (30%), Positives = 160/315 (50%), Gaps = 18/315 (5%)
Query: 4 LEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSGE 63
L +K +TK F G AVN + + + E G+LG NGAGKTTT ++ SGE
Sbjct: 1433 LVIKDLTKTF----GRFTAVNELCLAVDQKECFGLLGVNGAGKTTTFNILTGQSFASSGE 1488
Query: 64 VLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCEDIL 123
++ G D + I Y Q L L+ R+ + + GF AK E IL
Sbjct: 1489 AMIGGRDVTE-----LISIGYCPQFDALMLDLTGRESLEILAQMHGFENYKAK--AELIL 1541
Query: 124 ELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIKE 183
E G+ HA K S G KR++ + AL + ++ LDEPTAG+DP+++R+ WEL+
Sbjct: 1542 ECVGMIAHADKLVRFYSGGQKRKISVGVALLAPTQMIILDEPTAGIDPKARREVWELLLW 1601
Query: 184 KLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFGK--TVRIVLEEP 241
E ++LTSH + E E L R+ ++N+G ++A GS +ELK +G T+ + L EP
Sbjct: 1602 CREHSNSALMLTSHSMDECEALCSRIAVLNRGSLIAIGSSQELKSLYGNNYTMTLSLYEP 1661
Query: 242 IKNFELLKEELLRVKNVKDVRLARDDSFDVYF---KSLDDSINGILQVIS--PQELKIKD 296
+ +++ R+ N + + + ++ + K +D + +++ ++L +KD
Sbjct: 1662 NQRDMVVQLVQTRLPNSVLKTTSTNKTLNLKWQIPKEKEDCWSAKFEMVQALAKDLGVKD 1721
Query: 297 IFTATANFEDVYLEI 311
A ++ E+ +L +
Sbjct: 1722 FILAQSSLEETFLRL 1736
Score = 132 bits (328), Expect = 6e-30
Identities = 75/210 (35%), Positives = 122/210 (57%), Gaps = 2/210 (0%)
Query: 22 AVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSGEVLVDGIDAVKNPLEVRKR 81
AV+ +S A G+ +LG NGAGK+TT IA I RP +G + + G D P E R+
Sbjct: 616 AVDGLSLRAVRGQCSILLGHNGAGKSTTFSSIAGIIRPTNGRITICGYDVGNEPGETRRH 675
Query: 82 IAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCEDILELFGLKTHAHKKPFQLST 141
I Q L L+V +++ + +G ++D K+ + +L L ++K LS
Sbjct: 676 IGMCPQYNPLYDQLTVSEHLKLVYGLKGAREKDFKQDMKRLLSDVKLDFKENEKAVNLSG 735
Query: 142 GLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIKEKLEDKGVTVILTSHDLYE 201
G+KR++ + AL D +V LDEPTAG+DP +++ +L++ + ++ T++LT+H + E
Sbjct: 736 GMKRKLCVCMALIGDSEVVLLDEPTAGMDPGARQDVQKLVEREKANR--TILLTTHYMDE 793
Query: 202 VEYLADRVIIMNQGKIVAEGSPKELKKRFG 231
E L D V IM+ GK+VA G+ + LK++FG
Sbjct: 794 AERLGDWVFIMSHGKLVASGTNQYLKQKFG 823
>emb|CAA82383.2| (Z29117) contains similarity to Pfam domain: PF00005 (ABC
transporter), Score=319.9, E-value=9.7e-93, N=2~cDNA EST
yk8d5.5 comes from this gene; cDNA EST yk10f12.3 comes
from this gene~cDNA EST yk5b3.3 comes from this gene;
cDNA EST yk5b3.5 comes from >
Length = 1689
Score = 139 bits (348), Expect = 3e-32
Identities = 95/315 (30%), Positives = 160/315 (50%), Gaps = 18/315 (5%)
Query: 4 LEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSGE 63
L +K +TK F G AVN + + + E G+LG NGAGKTTT ++ SGE
Sbjct: 1364 LVIKDLTKTF----GRFTAVNELCLAVDQKECFGLLGVNGAGKTTTFNILTGQSFASSGE 1419
Query: 64 VLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCEDIL 123
++ G D + I Y Q L L+ R+ + + GF AK E IL
Sbjct: 1420 AMIGGRDVTE-----LISIGYCPQFDALMLDLTGRESLEILAQMHGFENYKAK--AELIL 1472
Query: 124 ELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIKE 183
E G+ HA K S G KR++ + AL + ++ LDEPTAG+DP+++R+ WEL+
Sbjct: 1473 ECVGMIAHADKLVRFYSGGQKRKISVGVALLAPTQMIILDEPTAGIDPKARREVWELLLW 1532
Query: 184 KLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFGK--TVRIVLEEP 241
E ++LTSH + E E L R+ ++N+G ++A GS +ELK +G T+ + L EP
Sbjct: 1533 CREHSNSALMLTSHSMDECEALCSRIAVLNRGSLIAIGSSQELKSLYGNNYTMTLSLYEP 1592
Query: 242 IKNFELLKEELLRVKNVKDVRLARDDSFDVYF---KSLDDSINGILQVIS--PQELKIKD 296
+ +++ R+ N + + + ++ + K +D + +++ ++L +KD
Sbjct: 1593 NQRDMVVQLVQTRLPNSVLKTTSTNKTLNLKWQIPKEKEDCWSAKFEMVQALAKDLGVKD 1652
Query: 297 IFTATANFEDVYLEI 311
A ++ E+ +L +
Sbjct: 1653 FILAQSSLEETFLRL 1667
Score = 132 bits (328), Expect = 6e-30
Identities = 75/210 (35%), Positives = 122/210 (57%), Gaps = 2/210 (0%)
Query: 22 AVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSGEVLVDGIDAVKNPLEVRKR 81
AV+ +S A G+ +LG NGAGK+TT IA I RP +G + + G D P E R+
Sbjct: 549 AVDGLSLRAVRGQCSILLGHNGAGKSTTFSSIAGIIRPTNGRITICGYDVGNEPGETRRH 608
Query: 82 IAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCEDILELFGLKTHAHKKPFQLST 141
I Q L L+V +++ + +G ++D K+ + +L L ++K LS
Sbjct: 609 IGMCPQYNPLYDQLTVSEHLKLVYGLKGAREKDFKQDMKRLLSDVKLDFKENEKAVNLSG 668
Query: 142 GLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIKEKLEDKGVTVILTSHDLYE 201
G+KR++ + AL D +V LDEPTAG+DP +++ +L++ + ++ T++LT+H + E
Sbjct: 669 GMKRKLCVCMALIGDSEVVLLDEPTAGMDPGARQDVQKLVEREKANR--TILLTTHYMDE 726
Query: 202 VEYLADRVIIMNQGKIVAEGSPKELKKRFG 231
E L D V IM+ GK+VA G+ + LK++FG
Sbjct: 727 AERLGDWVFIMSHGKLVASGTNQYLKQKFG 756
>emb|CAA82384.2| (Z29117) contains similarity to Pfam domain: PF00005 (ABC
transporter), Score=319.9, E-value=9.7e-93, N=2~cDNA EST
yk251b11.3 comes from this gene~cDNA EST yk251b11.5 comes
from this gene~cDNA EST yk576e5.5 comes from this
gene~cDNA EST yk595f5.5 comes>
Length = 1691
Score = 139 bits (348), Expect = 3e-32
Identities = 95/315 (30%), Positives = 160/315 (50%), Gaps = 18/315 (5%)
Query: 4 LEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSGE 63
L +K +TK F G AVN + + + E G+LG NGAGKTTT ++ SGE
Sbjct: 1366 LVIKDLTKTF----GRFTAVNELCLAVDQKECFGLLGVNGAGKTTTFNILTGQSFASSGE 1421
Query: 64 VLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCEDIL 123
++ G D + I Y Q L L+ R+ + + GF AK E IL
Sbjct: 1422 AMIGGRDVTE-----LISIGYCPQFDALMLDLTGRESLEILAQMHGFENYKAK--AELIL 1474
Query: 124 ELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIKE 183
E G+ HA K S G KR++ + AL + ++ LDEPTAG+DP+++R+ WEL+
Sbjct: 1475 ECVGMIAHADKLVRFYSGGQKRKISVGVALLAPTQMIILDEPTAGIDPKARREVWELLLW 1534
Query: 184 KLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFGK--TVRIVLEEP 241
E ++LTSH + E E L R+ ++N+G ++A GS +ELK +G T+ + L EP
Sbjct: 1535 CREHSNSALMLTSHSMDECEALCSRIAVLNRGSLIAIGSSQELKSLYGNNYTMTLSLYEP 1594
Query: 242 IKNFELLKEELLRVKNVKDVRLARDDSFDVYF---KSLDDSINGILQVIS--PQELKIKD 296
+ +++ R+ N + + + ++ + K +D + +++ ++L +KD
Sbjct: 1595 NQRDMVVQLVQTRLPNSVLKTTSTNKTLNLKWQIPKEKEDCWSAKFEMVQALAKDLGVKD 1654
Query: 297 IFTATANFEDVYLEI 311
A ++ E+ +L +
Sbjct: 1655 FILAQSSLEETFLRL 1669
Score = 132 bits (328), Expect = 6e-30
Identities = 75/210 (35%), Positives = 122/210 (57%), Gaps = 2/210 (0%)
Query: 22 AVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSGEVLVDGIDAVKNPLEVRKR 81
AV+ +S A G+ +LG NGAGK+TT IA I RP +G + + G D P E R+
Sbjct: 549 AVDGLSLRAVRGQCSILLGHNGAGKSTTFSSIAGIIRPTNGRITICGYDVGNEPGETRRH 608
Query: 82 IAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCEDILELFGLKTHAHKKPFQLST 141
I Q L L+V +++ + +G ++D K+ + +L L ++K LS
Sbjct: 609 IGMCPQYNPLYDQLTVSEHLKLVYGLKGAREKDFKQDMKRLLSDVKLDFKENEKAVNLSG 668
Query: 142 GLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIKEKLEDKGVTVILTSHDLYE 201
G+KR++ + AL D +V LDEPTAG+DP +++ +L++ + ++ T++LT+H + E
Sbjct: 669 GMKRKLCVCMALIGDSEVVLLDEPTAGMDPGARQDVQKLVEREKANR--TILLTTHYMDE 726
Query: 202 VEYLADRVIIMNQGKIVAEGSPKELKKRFG 231
E L D V IM+ GK+VA G+ + LK++FG
Sbjct: 727 AERLGDWVFIMSHGKLVASGTNQYLKQKFG 756
>pir||A70039 ABC transporter (ATP-binding protein) homolog yvfR - Bacillus
subtilis >gi|1945718|emb|CAB08012.1| (Z94043)
hypothetical protein [Bacillus subtilis]
>gi|2635922|emb|CAB15414.1| (Z99121) similar to ABC
transporter (ATP-binding protein) [Bacillus subtilis]
Length = 301
Score = 139 bits (348), Expect = 3e-32
Identities = 89/228 (39%), Positives = 128/228 (56%), Gaps = 13/228 (5%)
Query: 6 VKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSGEVL 65
V +VTK F AVNN+SFS GE+ ILGPNGAGKTT + MI + +P GE+
Sbjct: 8 VSNVTKHFQRKT----AVNNISFSIEKGEIAAILGPNGAGKTTVVSMILGLLKPSEGEIK 63
Query: 66 VDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCE-DILE 124
+ + V + +VR++I M QE + P L V D I+ FR + K+ L
Sbjct: 64 L--FNRVPDDQQVREKIGVMLQEVSVMPGLKV-DEILELFRSYYPNPLSMKELVSLTALT 120
Query: 125 LFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIKEK 184
LKT A K LS G KRR+ A AL+ + L+ LDEPT G+D S+ + W+ I
Sbjct: 121 KEDLKTRAEK----LSGGQKRRLSFALALAGNPELLILDEPTVGMDTSSRHRFWQTI-HG 175
Query: 185 LEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFGK 232
L D+G T+I ++H L E + A R++ +G++VA+GSP +++ R K
Sbjct: 176 LSDQGKTIIFSTHYLQEADDAAQRILFFTEGQLVADGSPMQIRSRIQK 223
>gb|AAF50837.1| (AE003568) CG1718 gene product [Drosophila melanogaster]
Length = 1713
Score = 139 bits (348), Expect = 3e-32
Identities = 84/250 (33%), Positives = 131/250 (51%), Gaps = 6/250 (2%)
Query: 4 LEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSGE 63
L + VTK + G+ +AVN VS E G+LG NGAGKTTT +M+ R SG
Sbjct: 1368 LVLDRVTKYY----GQFMAVNQVSLCVQEVECFGLLGVNGAGKTTTFKMMTGDERISSGA 1423
Query: 64 VLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCEDIL 123
V G+ N + K I Y Q L L+ R+ + + RG + ++ ED+
Sbjct: 1424 AYVQGLSLESNMNSIYKMIGYCPQFDALLDDLTGREVLRIFCMLRGVQESRIRQLSEDLA 1483
Query: 124 ELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIKE 183
+ FG H K+ S G KR++ A A+ +++LDEPT G+DP ++R+ W ++
Sbjct: 1484 KSFGFMKHIDKQTHAYSGGNKRKLSTAIAVIGSPSVIYLDEPTTGMDPAARRQLWNMVC- 1542
Query: 184 KLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFGKTVRIVLEEPIK 243
++ D G +++LTSH + E E L R+ IM G+ GS + LK +F K + I+ + +
Sbjct: 1543 RIRDSGKSIVLTSHSMEECEALCTRLAIMVNGEFKCIGSTQHLKNKFSKGL-ILKIKVRR 1601
Query: 244 NFELLKEELL 253
N E L++ L
Sbjct: 1602 NLEALRQARL 1611
Score = 138 bits (345), Expect = 7e-32
Identities = 74/234 (31%), Positives = 134/234 (56%), Gaps = 6/234 (2%)
Query: 4 LEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSGE 63
L+++ + K+F G + V +S + E+ +LG NGAGKTTT+ M+ ++ P SG
Sbjct: 516 LQMRHLKKRF----GNKMVVKGLSMNMFEDEITVLLGHNGAGKTTTISMLTGMFPPTSGT 571
Query: 64 VLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCEDIL 123
+++G D N R + Q L +SV ++I ++ R +G + ++ L
Sbjct: 572 AIINGSDIRTNIEGARMSLGICPQHNVLFDEMSVSNHIRFFSRMKGLRGKAVEQEVAKYL 631
Query: 124 ELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIKE 183
++ L+ A+ +LS G+KR++ + CAL D +V DEP++G+DP ++R+ W+L+++
Sbjct: 632 KMIELEDKANVASSKLSGGMKRKLSVCCALCGDTKVVLCDEPSSGMDPSARRQLWDLLQQ 691
Query: 184 KLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFGKTVRIV 237
E G T++LT+H + E + L DR+ IM G++ +G+ LKK++G R+V
Sbjct: 692 --EKVGRTLLLTTHFMDEADVLGDRIAIMCDGELKCQGTSFFLKKQYGSGYRLV 743
>pir||T47150 hypothetical protein DKFZp547P193.1 - human (fragment)
>gi|7328111|emb|CAB82398.1| (AL162060) hypothetical
protein [Homo sapiens]
Length = 373
Score = 139 bits (348), Expect = 3e-32
Identities = 94/303 (31%), Positives = 154/303 (50%), Gaps = 10/303 (3%)
Query: 18 GEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSGEVLVDGIDAVKNPLE 77
G ++AV+ + GE G+LG NGAGKT+T +M+ GE V+G +K L+
Sbjct: 3 GRILAVDRLCLGVRPGECFGLLGVNGAGKTSTFKMLTGDESTTGGEAFVNGHSVLKELLQ 62
Query: 78 VRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCEDILELFGLKTHAHKKPF 137
V++ + Y Q L L+ R+++ Y R RG S +D + + LE L +A K
Sbjct: 63 VQQSLGYCPQCDALFDELTAREHLQLYTRLRGISWKDEARVVKWALEKLELTKYADKPAG 122
Query: 138 QLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIKEKLEDKGVTVILTSH 197
S G KR++ A AL +FLDEPT G+DP+++R W LI + ++ G +V+LTSH
Sbjct: 123 TYSGGNKRKLSTAIALIGYPAFIFLDEPTTGMDPKARRFLWNLILDLIK-TGRSVVLTSH 181
Query: 198 DLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFGKTVRIVLEEPIKNFELLKEEL-LRVK 256
+ E E L R+ IM G++ GS + LK RFG I + K+ + +K+ + +
Sbjct: 182 SMEECEALCTRLAIMVNGRLRCLGSIQHLKNRFGDGYMITVR--TKSSQSVKDVVRFFNR 239
Query: 257 NVKDVRLARDDSFDVYFKSLDDSINGILQVISPQE-----LKIKDIFTATANFEDVYLEI 311
N + L V ++ + I+ + QV S E L I+D + ++V++
Sbjct: 240 NFPEAMLKERHHTKVQYQLKSEHIS-LAQVFSKMEQVSGVLGIEDYSVSQTTLDNVFVNF 298
Query: 312 IER 314
++
Sbjct: 299 AKK 301
>pir||E72636 probable nodulation ATP-binding protein I APE1548 - Aeropyrum
pernix (strain K1) >gi|5105233|dbj|BAA80547.1|
(AP000061) 338aa long hypothetical nodulation
ATP-binding protein I [Aeropyrum pernix]
Length = 338
Score = 139 bits (347), Expect = 4e-32
Identities = 83/234 (35%), Positives = 131/234 (55%), Gaps = 7/234 (2%)
Query: 4 LEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSGE 63
+E + + K+F G AV VSFS GE I+GPNG+GKTT LRM++ + RP G
Sbjct: 43 VEARGLRKRF----GGRTAVAGVSFSVGDGERACIMGPNGSGKTTLLRMVSGVLRPSGGS 98
Query: 64 VLVDGIDAVKNPL-EVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCEDI 122
V V G D + E R I + Q+P + ++ +YI G S A++ +
Sbjct: 99 VRVCGYDVWGDGWREARGLIGFAPQDPPMARRMTGAEYITVVGGLLGLSPGVARREARRV 158
Query: 123 LELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIK 182
LE+ G + + +LS G +R + +A AL+S+ +V LDEP +G+D R++ W ++
Sbjct: 159 LEMLGFEDVLGRVVARLSGGQRRALGIALALASNPEVVVLDEPGSGLDVRARESLWASLR 218
Query: 183 EKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFGKTVRI 236
+ KG TV+ +SHD E E +DRV+IM++G++ A G P+EL +R+ R+
Sbjct: 219 KAF--KGRTVLFSSHDPQEAEAESDRVLIMHRGRLAAWGKPRELIQRYAPKPRV 270
>dbj|BAB04009.1| (AP001508) ABC transporter (ATP-binding protein) [Bacillus
halodurans]
Length = 301
Score = 139 bits (347), Expect = 4e-32
Identities = 88/310 (28%), Positives = 169/310 (54%), Gaps = 15/310 (4%)
Query: 4 LEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSGE 63
LE+KSVTKK+ E AV++ S SGE +G++GPNGAGKTT ++MI I P G+
Sbjct: 3 LEIKSVTKKYK----EKTAVHDFSMDLLSGECVGLIGPNGAGKTTLIKMITNILDPTRGD 58
Query: 64 VLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCEDIL 123
+L++G K E+++ I Y+ Q PD ++ + +++ + G SK+ K +IL
Sbjct: 59 ILLNG----KRISEMKREIGYLPQYPDFYQWMTASETLLFMGQLSGISKKKLTKSIPEIL 114
Query: 124 ELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIKE 183
GL+ + K S G+K+R+ +A AL + +DEP + +DP +R+ +I+E
Sbjct: 115 SKVGLRGEENSKVSTFSGGMKQRLGIAQALLHKPSFIVMDEPVSALDPIGRREVLNIIEE 174
Query: 184 KLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFGKT-VRIVLEEPI 242
+D T++L++H L + E + +R++++ G+ + + + EL R K +R+ + +
Sbjct: 175 IKKDS--TILLSTHILADAEEICERLVMIKNGEKIEDTTMMELLNRNSKNKIRVEITDES 232
Query: 243 KNFELLKEELLRVKNVKDVRLARDDSFDVYFKSLDDSINGILQVISPQELKIKDIFTATA 302
K++ E + ++ V+DV + + +V K+++ N +L ++ I
Sbjct: 233 KDW---IEVVKKLNYVQDVEVT-GNKVNVEVKNIELHKNMLLANALKHDVNIVKFELDHD 288
Query: 303 NFEDVYLEII 312
E+++L+++
Sbjct: 289 TLEELFLKLV 298
>dbj|BAB16596.1| (AB037937) ABC2 [Rattus norvegicus]
Length = 2434
Score = 139 bits (346), Expect = 5e-32
Identities = 95/319 (29%), Positives = 164/319 (50%), Gaps = 11/319 (3%)
Query: 3 ILEVKSVTKKFPTPK-GEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDS 61
+++++++TK + + K G ++AV+ + GE G+LG NGAGKT+T +M+
Sbjct: 2050 MVKIENLTKVYKSRKIGRILAVDRLCLGVRPGECFGLLGVNGAGKTSTFKMLTGDESTTG 2109
Query: 62 GEVLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCED 121
GE V+G +K+ L+V++ + Y Q L L+ R+++ Y R RG +D +
Sbjct: 2110 GEAFVNGHSVLKDLLQVQQSLGYCPQFDALFDELTAREHLQLYTRLRGIPWKDEAQVVRW 2169
Query: 122 ILELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELI 181
LE L A K S G KR++ A AL +FLDEPT G+DP+++R W LI
Sbjct: 2170 ALEKLELTKCADKPAGSYSGGNKRKLSTAIALIGYPAFIFLDEPTTGMDPKARRFLWNLI 2229
Query: 182 KEKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFGKTVRIVLEEP 241
+ ++ G +V+LTSH + E E + R+ IM G++ GS + LK RFG I +
Sbjct: 2230 LDLIK-TGRSVVLTSHSMEECEAVCTRLAIMVNGRLRCLGSIQHLKNRFGDGYMITVR-- 2286
Query: 242 IKNFELLKEEL-LRVKNVKDVRLARDDSFDVYFKSLDDSINGILQVISPQE-----LKIK 295
K+ + +K+ + +N + L V ++ + I+ + QV S E L I+
Sbjct: 2287 TKSSQNVKDVVRFFNRNFPEAMLKERHHTKVQYQLKSEHIS-LAQVFSKMEHVVGVLGIE 2345
Query: 296 DIFTATANFEDVYLEIIER 314
D + ++V++ ++
Sbjct: 2346 DYSVSQTTLDNVFVNFAKK 2364
Score = 136 bits (338), Expect = 4e-31
Identities = 76/233 (32%), Positives = 126/233 (53%), Gaps = 4/233 (1%)
Query: 6 VKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSGEVL 65
V +TK + K +A+N +S + +V+ LG NGAGKTTT+ ++ ++ P SG
Sbjct: 992 VDKLTKVYKNDKK--LALNKLSLNLYENQVVSFLGHNGAGKTTTMSILTGLFPPTSGSAT 1049
Query: 66 VDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCEDILEL 125
+ G D E+RK + Q L L+V +++ +Y R + ++ + +K + ++E
Sbjct: 1050 IYGHDIRTEMDEIRKNLGMCPQHNVLFDQLTVEEHLWFYSRLKSMAQEEIRKEMDKMIED 1109
Query: 126 FGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIKEKL 185
L H LS G+KR++ +A A + LDEPTAGVDP ++R W+LI +
Sbjct: 1110 LELSNKRHSLVQTLSGGMKRKLSVAIAFVGGSRAIILDEPTAGVDPYARRAIWDLILK-- 1167
Query: 186 EDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFGKTVRIVL 238
G T++L++H + E + L DR+ I++ GK+ GSP LK +G R+ L
Sbjct: 1168 YKPGRTILLSTHHMDEADLLGDRIAIISHGKLKCCGSPLFLKGAYGDGYRLTL 1220
>gi|4557876 ATP-binding cassette, sub-family A member 4; ATP binding cassette
transporter; ATP-binding transporter, retina-specific;
rim protein [Homo sapiens] >gi|1888527|gb|AAC51144.1|
(U88667) ATP-binding cassette transporter [Homo sapiens]
Length = 2273
Score = 139 bits (346), Expect = 5e-32
Identities = 82/246 (33%), Positives = 138/246 (55%), Gaps = 4/246 (1%)
Query: 1 MPILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPD 60
+P + VK++ K F + N++F N ++ LG NGAGKTTTL ++ + P
Sbjct: 926 VPGVCVKNLVKIFEPCGRPAVDRLNITFYEN--QITAFLGHNGAGKTTTLSILTGLLPPT 983
Query: 61 SGEVLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCE 120
SG VLV G D + VR+ + Q L L+V +++++Y + +G S+ +A+ E
Sbjct: 984 SGTVLVGGRDIETSLDAVRQSLGMCPQHNILFHHLTVAEHMLFYAQLKGKSQEEAQLEME 1043
Query: 121 DILELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWEL 180
+LE GL +++ LS G++R++ +A A D +V LDEPT+GVDP S+R W+L
Sbjct: 1044 AMLEDTGLHHKRNEEAQDLSGGMQRKLSVAIAFVGDAKVVILDEPTSGVDPYSRRSIWDL 1103
Query: 181 IKEKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFGKTVRIVLEE 240
+ + G T+I+ +H + E ++ DR+ I+ QG++ G+P LK FG + + L
Sbjct: 1104 LLK--YRSGRTIIMPTHHMDEADHQGDRIAIIAQGRLYCSGTPLFLKNCFGTGLYLTLVR 1161
Query: 241 PIKNFE 246
+KN +
Sbjct: 1162 KMKNIQ 1167
Score = 124 bits (309), Expect = 1e-27
Identities = 75/210 (35%), Positives = 109/210 (51%), Gaps = 1/210 (0%)
Query: 22 AVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSGEVLVDGIDAVKNPLEVRKR 81
AV+ + GE G+LG NGAGKTTT +M+ SG+ V G + N EV +
Sbjct: 1954 AVDRLCVGVRPGECFGLLGVNGAGKTTTFKMLTGDTTVTSGDATVAGKSILTNISEVHQN 2013
Query: 82 IAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCEDILELFGLKTHAHKKPFQLST 141
+ Y Q + L+ R+++ Y R RG + +K ++ GL +A S
Sbjct: 2014 MGYCPQFDAIDELLTGREHLYLYARLRGVPAEEIEKVANWSIKSLGLTVYADCLAGTYSG 2073
Query: 142 GLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIKEKLEDKGVTVILTSHDLYE 201
G KR++ A AL PLV LDEPT G+DP+++R W +I + KG V+LTSH + E
Sbjct: 2074 GNKRKLSTAIALIGCPPLVLLDEPTTGMDPQARRMLWNVIVSIIR-KGRAVVLTSHSMEE 2132
Query: 202 VEYLADRVIIMNQGKIVAEGSPKELKKRFG 231
E L R+ IM +G G+ + LK +FG
Sbjct: 2133 CEALCTRLAIMVKGAFRCMGTIQHLKSKFG 2162
>pir||C69819 ABC transporter (ATP-binding protein) homolog yhaQ - Bacillus
subtilis >gi|2226131|emb|CAA74424.1| (Y14078)
Hypothetical protein [Bacillus subtilis]
>gi|2633325|emb|CAB12829.1| (Z99109) similar to ABC
transporter (ATP-binding protein) [Bacillus subtilis]
Length = 298
Score = 139 bits (346), Expect = 5e-32
Identities = 93/302 (30%), Positives = 153/302 (49%), Gaps = 19/302 (6%)
Query: 3 ILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSG 62
+L + VTK F G+ AV+ + ++ G+LG NGAGKTTT RMI + G
Sbjct: 1 MLTIDHVTKTF----GDYKAVDGLDLDIPEQQMFGLLGANGAGKTTTFRMILGLLSITEG 56
Query: 63 EVLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCEDI 122
+ G + +I Y+ +E L P + VRD ++Y R +G KR+A K
Sbjct: 57 SISWKGRPV---NYHISNKIGYLPEERGLYPKMKVRDQLVYLARLKGMEKREAVKELGTW 113
Query: 123 LELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIK 182
LE F + + +KK +L+ G ++++Q A+ L+ LDEP +G+DP + EL+K
Sbjct: 114 LERFNITDYENKKVEELAKGNQQKIQFISAVLHKPELLILDEPFSGLDPVNV----ELLK 169
Query: 183 E---KLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFGKTVRIVLE 239
E L++ GV+++ +SH + VE L + + I+ +GK V +G KE+K+ FGK +
Sbjct: 170 EAVISLKNSGVSILFSSHRMEHVEELCENLCILQKGKPVVQGKLKEIKRSFGKKNVTIHS 229
Query: 240 EPIKNFELLKEELLRVKNVKD---VRLARDDSFDVYFKSLDDSINGILQVISPQELKIKD 296
+ F E +L+ K D +++A +D F L G ++ +E + D
Sbjct: 230 DDDLRFLQSHEGILQWKETADGVKLQIANEDISQEIFAMLQG--KGFIRKFELEEPSLHD 287
Query: 297 IF 298
IF
Sbjct: 288 IF 289
>sp|P42332|BCRA_BACLI BACITRACIN TRANSPORT ATP-BINDING PROTEIN BCRA
>gi|7445603|pir||S77627 bacitracin transport protein
bcrA - Bacillus licheniformis >gi|437315|gb|AAA99504.1|
(L20573) TTG start codon [Bacillus licheniformis]
Length = 306
Score = 138 bits (345), Expect = 7e-32
Identities = 82/270 (30%), Positives = 150/270 (55%), Gaps = 11/270 (4%)
Query: 3 ILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSG 62
I++ +TK + + K +V++++ + G++ G LG NGAGKTTT+RM+ + +P SG
Sbjct: 4 IIKTTDLTKMYGSQK----SVDHLNINVKQGDIYGFLGRNGAGKTTTIRMLLGLIKPTSG 59
Query: 63 EVLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCEDI 122
++ + G + KN E+ +RI + + P L+ R+ ++ + G K++A +++
Sbjct: 60 QIEIFGENFFKNKKEILRRIGSIVEVPGFYANLTARENLLINAKIIGIHKKNA---IDEV 116
Query: 123 LELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIK 182
LE+ GL+ K + S G+K+R+ +A AL L+ LDEPT G+DP ++ LI
Sbjct: 117 LEIVGLQHETKKLVGKFSLGMKQRLGIARALLHYPELLILDEPTNGLDPIGIKEMRRLIH 176
Query: 183 EKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFGKTVRIVLEEPI 242
+++ +T+ ++SH L E+E L D V I+++GK++ E LKKR K + L +
Sbjct: 177 SLAKERNITIFISSHILSEIEQLVDHVGIIHEGKLLEEIPFDHLKKRNRKYLEFQLSDQN 236
Query: 243 KNFELLKEELLRVKNVKDVRLARDDSFDVY 272
K L+++ ++ D + +D VY
Sbjct: 237 KAVVLMEQHF----DIHDYEVHQDGIIRVY 262
>gb|AAG20473.1| (AE005119) copper transport ATP-binding protein; NosF1
[Halobacterium sp. NRC-1]
Length = 304
Score = 138 bits (345), Expect = 7e-32
Identities = 84/309 (27%), Positives = 160/309 (51%), Gaps = 16/309 (5%)
Query: 1 MPILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPD 60
MP +E+ V+K++ G+V A+ +++ + + GE+ G LGPNGAGK+T + ++ RP
Sbjct: 1 MPAIELSGVSKRY----GDVTALTDLNITVDEGEIYGFLGPNGAGKSTAINILLDFVRPT 56
Query: 61 SGEVLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCE 120
+G + G DA + +R+RI + + + L+ R ++ + ++A +
Sbjct: 57 TGSATILGYDAQADSQAIRQRIGVLPEGFSVYDRLTARKHVEF-----AIDSKNATNDPD 111
Query: 121 DILELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWEL 180
+L+ G+ A +K STG+++R+ LA AL D ++ LDEP++G+DP R+ +
Sbjct: 112 ALLDRVGIPEAADRKAGGFSTGMRQRLGLAIALVGDPEMLLLDEPSSGLDPNGAREMRSI 171
Query: 181 IKEKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFGKTVRIVLEE 240
+ E+ ++G TV +SH L +VE + D I+ G +VAE S L++ T + +
Sbjct: 172 LTEE-ANRGTTVFFSSHILGQVEAICDHAGILQNGTLVAEDSIDALREATDATTTLTV-- 228
Query: 241 PIKNFELLKEELLRVKN-VKDVRLARDDSFDVYFKSLDDSINGILQVISPQELKIKDIFT 299
+ + ++ + N + V D+ D+ ++ D S +L I ++D T
Sbjct: 229 ---TLDAVTDDAVAAANAIPGVSEVSVDASDLVVRTGDASKTDVLDAIESTGATVQDFAT 285
Query: 300 ATANFEDVY 308
A+ +DV+
Sbjct: 286 EDASLDDVF 294
>gb|AAC48716.1| (U90126) ABC transporter [Bos taurus]
Length = 2281
Score = 138 bits (344), Expect = 9e-32
Identities = 84/246 (34%), Positives = 139/246 (56%), Gaps = 4/246 (1%)
Query: 1 MPILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPD 60
+P + VK++ K F P G AV+ ++ + ++ LG NGAGKTTTL ++ + P
Sbjct: 926 VPGVCVKNLVKIFE-PYGRP-AVDRLNITFYESQITAFLGHNGAGKTTTLSIMTGLLPPT 983
Query: 61 SGEVLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCE 120
SG VLV G D N +R+ + Q L L+V ++I++Y + +G S +A+ E
Sbjct: 984 SGTVLVGGKDIETNLDAIRQSLGMCPQHNILFHHLTVAEHILFYAQLKGRSWDEAQLEME 1043
Query: 121 DILELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWEL 180
+LE GL +++ LS G++R++ +A A D +V LDEPT+GVDP S+R W+L
Sbjct: 1044 AMLEDTGLHHKRNEEARDLSGGVQRKLSVAIAFVGDAKVVVLDEPTSGVDPYSRRSIWDL 1103
Query: 181 IKEKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFGKTVRIVLEE 240
+ + G T+I+++H + E + L DR+ I++QG++ G+P LK FG + L
Sbjct: 1104 LLK--YRSGRTIIMSTHHMDEADILGDRIAIISQGRLYCSGTPLFLKNCFGTGFYLTLVR 1161
Query: 241 PIKNFE 246
+K +
Sbjct: 1162 RMKTIQ 1167
Score = 121 bits (300), Expect = 1e-26
Identities = 75/229 (32%), Positives = 116/229 (49%), Gaps = 3/229 (1%)
Query: 3 ILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSG 62
IL + +TK + AV+ + GE G+LG NGAGKTTT +M+ SG
Sbjct: 1935 ILRLNELTKVYSGTSSP--AVDRLCVGVRPGECFGLLGVNGAGKTTTFKMLTGDTAVTSG 1992
Query: 63 EVLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCEDI 122
+ V G + N +V + + Y Q + L+ R+++ Y R RG + ++
Sbjct: 1993 DATVAGKSILTNISDVHQSMGYCPQFDAIDDLLTGREHLYLYARLRGVPAEEIERVTNWS 2052
Query: 123 LELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIK 182
++ GL +A + S G KR++ A AL PLV LDEPT G+DP+++R W I
Sbjct: 2053 IQSLGLSLYADRLAGTYSGGNKRKLSTAIALIGCPPLVLLDEPTTGMDPQARRMLWNTIM 2112
Query: 183 EKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFG 231
+ ++ V+LTSH + E E L R+ IM +G G+ + LK +FG
Sbjct: 2113 GIIREER-AVVLTSHSMEECEALCTRLAIMVKGAFQCLGTIQHLKSKFG 2160
>pir||C72336 ABC transporter, ATP-binding protein - Thermotoga maritima (strain
MSB8) >gi|4981293|gb|AAD35847.1|AE001746_8 (AE001746)
ABC transporter, ATP-binding protein [Thermotoga
maritima]
Length = 265
Score = 138 bits (344), Expect = 9e-32
Identities = 104/312 (33%), Positives = 161/312 (51%), Gaps = 54/312 (17%)
Query: 1 MPILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPD 60
M IL VK + K + GE AV+ +SF GE+ ILGPNGAGKTTTL+ I + + D
Sbjct: 1 MMILRVKDLKKFY----GEKAAVDGISFEVEKGEIFAILGPNGAGKTTTLKCITGLRKKD 56
Query: 61 SGEVLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCE 120
SGE+ ++G Y+ +E L P L V++ I F+ K +K+C
Sbjct: 57 SGEIELNG------------TFTYLPEEKKLYPYLRVKEIIDL---FKKIGKNFNEKNCL 101
Query: 121 DILELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWEL 180
++LE F + ++K LS G++ + L+ LS +V L LDEPT G+DP + + +
Sbjct: 102 ELLERF--RIDLNEKVTNLSHGMRTILYLSLVLSENVDLYILDEPTWGLDPIVRNEILDR 159
Query: 181 IKEKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFGKTVRIVLEE 240
I+ L +G +V+ TSH L EVE +ADRV IM +GKI+ G+ ++K +G +V+
Sbjct: 160 IR-SLTFEGKSVLYTSHVLAEVEKIADRVAIMKEGKIILTGNLDDIKSSYG----LVVSR 214
Query: 241 PIKNFELLKEELLRVKNVKDVRLARDDSFDVYFKSLDDSINGILQVISPQELKIKDIFTA 300
N LLK +K+ + V L + + +P+ +KI+D
Sbjct: 215 ENLNGYLLK----TLKSGEKVYLVKKEE-------------------APEGVKIED---- 247
Query: 301 TANFEDVYLEII 312
A FED++ I+
Sbjct: 248 -AAFEDIFEAIV 258
>emb|CAB37661.1| (AJ224479) cdd4-like protein [Bacillus sphaericus]
Length = 311
Score = 138 bits (343), Expect = 1e-31
Identities = 85/309 (27%), Positives = 163/309 (52%), Gaps = 16/309 (5%)
Query: 3 ILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSG 62
I++ ++++K F G+ AV+N++ GE+ G LGPNGAGKTTT+RM+ + +P SG
Sbjct: 12 IVQTQNLSKNF----GKEQAVSNINLQIRKGEIYGFLGPNGAGKTTTIRMLLGLMKPSSG 67
Query: 63 EVLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCEDI 122
+ + D VK+ +++ + + + P P L+ + + + G K +++
Sbjct: 68 TIKIFQKDIVKDRIQILANVGSLVENPSYYPHLTAYENLEALRKILGVPKT----RIDEV 123
Query: 123 LELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIK 182
L+ LK A+KK S G+K+R+ +A AL + L+ LDEPT G+DP + LIK
Sbjct: 124 LQTVRLKEAANKKVKGFSLGMKQRLGIAAALLHNPELLILDEPTNGLDPSGIIEIRNLIK 183
Query: 183 EKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFGKTVRIVLEEPI 242
++ G+T+I++SH L E++ +A +V I+++G ++ + S + ++K V +
Sbjct: 184 RLPKEYGMTIIISSHLLSEIDQMATQVGIVSKGTLIFQDSIEGMRKFAQPKVTFKVSNGE 243
Query: 243 KNFELLKEELLRVKNVKDVRLARDDSFDVYFKSLDDSINGILQVISPQELKIKDIFTATA 302
K + L ++ DV + S D+ + I+QV+ + + + +
Sbjct: 244 KGWRSLLANGIKANYQDDVIFLEECS--------DEKVAHIVQVLVQEGISVFRVEEEKR 295
Query: 303 NFEDVYLEI 311
+ ED++L++
Sbjct: 296 SLEDIFLQM 304
>pir||H72301 ABC transporter, ATP-binding protein - Thermotoga maritima (strain
MSB8) >gi|4981596|gb|AAD36131.1|AE001765_10 (AE001765)
ABC transporter, ATP-binding protein [Thermotoga
maritima]
Length = 236
Score = 138 bits (343), Expect = 1e-31
Identities = 81/239 (33%), Positives = 139/239 (57%), Gaps = 9/239 (3%)
Query: 1 MPILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPD 60
M +L +++ K+F G VN V+ + GE++G+LGPNGAGKTT MI + P
Sbjct: 1 MDVLRCENLKKRF----GRRYVVNGVNLEFHRGEIVGLLGPNGAGKTTIFNMILGVVVPT 56
Query: 61 SGEVLVDGIDAVKNPLEVRKR--IAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKH 118
SG+++ +D K P+ R R I Y+ QE + L+VR+ I RF K ++
Sbjct: 57 SGKIIFRDVDITKFPVYRRARLGITYLQQETSIFGGLTVRENIDLVLRFHEKDKEKRERK 116
Query: 119 CEDILELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTW 178
E++L F LK ++ LS G KR+++LA + + + LDEP +G+DP++ ++
Sbjct: 117 IEELLHEFHLKHLENQPASFLSGGEKRKLELARMMCLNPAFILLDEPFSGIDPKTVKEIQ 176
Query: 179 ELIKEKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFGKTVRIV 237
++ E L+ K +++T H++ E+ +ADR+ ++ +G+I+AEGSP+ + + +TVR V
Sbjct: 177 KMTLE-LKQKNFGIVITDHNVDELVEIADRIYVIYKGEILAEGSPERILE--DETVREV 232
>pir||E69162 sulfate transport system ATP-binding - Methanobacterium
thermoautotrophicum (strain Delta H)
>gi|2621547|gb|AAB84983.1| (AE000832) sulfate transport
system ATP-binding [Methanobacterium
thermoautotrophicum]
Length = 348
Score = 137 bits (342), Expect = 1e-31
Identities = 87/233 (37%), Positives = 140/233 (59%), Gaps = 19/233 (8%)
Query: 1 MPILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPD 60
M ++E+ +TK + G++ + +V+ GE LGI+GP GAGK+T LR++ + RPD
Sbjct: 2 MHVIELSGITKSY----GDIKVLEDVNLKVREGETLGIIGPTGAGKSTLLRIMDLLERPD 57
Query: 61 SGEVLVDG--IDAVKNPLEVRKRIAYMTQEPDLTPPL--SVRDYIIYYFRFRGFSKRDAK 116
GE+L G +D +K PLEVR+R+ + Q TP +V + I+Y R RG +R +
Sbjct: 58 DGEILFMGENVDDLK-PLEVRRRMGMVFQN---TPVFRGTVAESILYGPRIRG--ERPHE 111
Query: 117 KHCEDILELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRK 176
+D+LE GLK + ++ +LS G ++R+ LA L + +V LDE T+ +DP S+ +
Sbjct: 112 SEVKDVLETMGLKGYGSRRTTELSGGERQRLALAQVLINRPEVVLLDEATSSLDPISRSR 171
Query: 177 TWELIKEKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKR 229
++I E VTVI T+HDL + + LADR+ I+N+ I+ G P+E+ K+
Sbjct: 172 MEDVIAE----LDVTVIFTTHDLLQGQKLADRIAILNR-SILQTGEPREIFKK 219
>pir||T31682 bcrA protein - Bacillus licheniformis >gi|4464278|gb|AAD21213.1|
(AF007865) BcrA [Bacillus licheniformis]
Length = 306
Score = 137 bits (342), Expect = 1e-31
Identities = 82/270 (30%), Positives = 149/270 (54%), Gaps = 11/270 (4%)
Query: 3 ILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSG 62
I++ +TK + + K +V++++ + G++ G LG NGAGKTTT+RM+ + +P SG
Sbjct: 4 IIKTTDLTKMYGSQK----SVDHLNINVKQGDIYGFLGRNGAGKTTTIRMLLGLIKPTSG 59
Query: 63 EVLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCEDI 122
++ + G + KN E+ +RI + + P L+ R+ ++ + G K++A +++
Sbjct: 60 QIEIFGENFFKNKKEILRRIGSIVEVPGFYANLTARENLLINAKIIGIHKKNA---IDEV 116
Query: 123 LELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIK 182
LE+ GL+ K + S G+K+R+ +A AL L LDEPT G+DP ++ LI
Sbjct: 117 LEIVGLQHETKKLVGKFSLGMKQRLGIARALLHYPELSILDEPTNGLDPIGIKEMRRLIH 176
Query: 183 EKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFGKTVRIVLEEPI 242
+++ +T+ ++SH L E+E L D V I+++GK++ E LKKR K + L +
Sbjct: 177 SLAKERNITIFISSHILSEIEQLVDHVGIIHEGKLLEEIPFDHLKKRNRKYLEFQLSDQN 236
Query: 243 KNFELLKEELLRVKNVKDVRLARDDSFDVY 272
K L+++ ++ D + +D VY
Sbjct: 237 KAVVLMEQH----SDIHDYEVHQDGIIRVY 262
>dbj|BAA75396.1| (AB013378) YhaQ [Bacillus halodurans]
Length = 314
Score = 137 bits (342), Expect = 1e-31
Identities = 94/286 (32%), Positives = 153/286 (52%), Gaps = 18/286 (6%)
Query: 1 MPILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPD 60
M I++ +VTK+F G A+N ++ GE+ G +GPNGAGK+TT+R++ I +
Sbjct: 10 MEIVKATNVTKRF----GAFTALNRINLEVQRGEIYGFIGPNGAGKSTTIRILLGILKAS 65
Query: 61 SGEVLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCE 120
GE + G D + +E+ K +AY+ + L P L+ + I + + RG + + H
Sbjct: 66 EGEAKIFGKDVWSDAVEIHKHLAYVPGDVSLWPNLTGGEVIDLFMKLRGSVDKKRRDH-- 123
Query: 121 DILELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWEL 180
+E F K KK S G +++V L A +S L LDEPT+G+DP +R E
Sbjct: 124 -FIERF--KLDPSKKCRTYSKGNRQKVALVAAFASGADLYILDEPTSGLDPLMERVFQEC 180
Query: 181 IKEKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFGKTVRIVLEE 240
+ E ++ G +V+L+SH L EVE L D+V I+ QG+++ G+ EL+ T+ + ++
Sbjct: 181 VLE-AKEAGKSVLLSSHILSEVERLCDKVGIIRQGEMIETGTLDELRHLTRTTLVVKTKQ 239
Query: 241 PIKNFELLKEELLRVKNVKDVRLARDD-SFDVYFKSLDDSINGILQ 285
PI L+E+ K V D+ SF V +SLD+ + + Q
Sbjct: 240 PI---PALQEQ----KGVHDLAEKNGGFSFQVDAESLDEVMKYVSQ 278
>gb|AAF23811.1|AF213822_26 (AF213822) ABC binding protein [Zymomonas mobilis]
Length = 298
Score = 137 bits (342), Expect = 1e-31
Identities = 78/225 (34%), Positives = 133/225 (58%), Gaps = 5/225 (2%)
Query: 3 ILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSG 62
+L + V+K +P K V A+NNVS + SG + G+LGPNGAGK+T + +IAT+ RPD G
Sbjct: 1 MLRLSGVSKIYPG-KNPVHALNNVSLNVPSG-IFGLLGPNGAGKSTLMSIIATLQRPDRG 58
Query: 63 EVLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKH-CED 121
+ + IDA +P E+R ++ Y+ Q+ P S + + Y+ R +G S ++H
Sbjct: 59 SIHLGEIDAFASPREMRAKLGYLPQDFGTYPGASAEELLHYFARLKGISTAAEREHQIGT 118
Query: 122 ILELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELI 181
+LE+ L ++ S G+++R +A AL L+ + EPTAG+DP + + +++
Sbjct: 119 LLEMVNLDAAKNRPVSDYSGGMRQRFGVAQALLGHPKLLIVVEPTAGLDPAERNRFNQIL 178
Query: 182 KEKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKEL 226
E+ +IL++H + +V L R+ ++NQG+I+AEG P++L
Sbjct: 179 ANIGEN--TAIILSTHIIEDVSNLCRRIAVINQGRIMAEGDPEKL 221
>dbj|BAB04722.1| (AP001510) ABC transporter (ATP-binding protein) [Bacillus
halodurans]
Length = 305
Score = 137 bits (342), Expect = 1e-31
Identities = 94/286 (32%), Positives = 153/286 (52%), Gaps = 18/286 (6%)
Query: 1 MPILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPD 60
M I++ +VTK+F G A+N ++ GE+ G +GPNGAGK+TT+R++ I +
Sbjct: 1 MEIVKATNVTKRF----GAFTALNRINLEVQRGEIYGFIGPNGAGKSTTIRILLGILKAS 56
Query: 61 SGEVLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCE 120
GE + G D + +E+ K +AY+ + L P L+ + I + + RG + + H
Sbjct: 57 EGEAKIFGKDVWSDAVEIHKHLAYVPGDVSLWPNLTGGEVIDLFMKLRGSVDKKRRDH-- 114
Query: 121 DILELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWEL 180
+E F K KK S G +++V L A +S L LDEPT+G+DP +R E
Sbjct: 115 -FIERF--KLDPSKKCRTYSKGNRQKVALVAAFASGADLYILDEPTSGLDPLMERVFQEC 171
Query: 181 IKEKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFGKTVRIVLEE 240
+ E ++ G +V+L+SH L EVE L D+V I+ QG+++ G+ EL+ T+ + ++
Sbjct: 172 VLE-AKEAGKSVLLSSHILSEVERLCDKVGIIRQGEMIETGTLDELRHLTRTTLVVKTKQ 230
Query: 241 PIKNFELLKEELLRVKNVKDVRLARDD-SFDVYFKSLDDSINGILQ 285
PI L+E+ K V D+ SF V +SLD+ + + Q
Sbjct: 231 PI---PALQEQ----KGVHDLAEKNGGFSFQVDAESLDEVMKYVSQ 269
>gi|6005701 ATP-binding cassette, sub-family A member 8 [Homo sapiens]
>gi|4240130|dbj|BAA74845.1| (AB020629) KIAA0822 protein
[Homo sapiens]
Length = 1581
Score = 137 bits (341), Expect = 2e-31
Identities = 96/300 (32%), Positives = 155/300 (51%), Gaps = 18/300 (6%)
Query: 21 IAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSGEVLVDGIDAVKNPLEVRK 80
IA NVSF GEVLG+LG NGAGK+T++++I +P +G+VL+ G + +
Sbjct: 1264 IATRNVSFCVRKGEVLGLLGHNGAGKSTSIKVITGDTKPTAGQVLLKGSGGG----DALE 1319
Query: 81 RIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCEDILELFGLKTHAHKKPFQLS 140
+ Y QE L P L+VR ++ Y +G K DA+ +++ L+ LS
Sbjct: 1320 FLGYCPQENALWPNLTVRQHLEVYAAVKGLRKGDAEVAITRLVDALKLQDQLKSPVKTLS 1379
Query: 141 TGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIKEKLEDKGVTVILTSHDLY 200
G+KR++ ++ + +V LDEP+ G+DP +++ W+ I+ + +LT+H +
Sbjct: 1380 EGIKRKLCFVLSILGNPSVVLLDEPSTGMDPEGQQQMWQAIRATFRNTERGALLTTHYMA 1439
Query: 201 EVEYLADRVIIMNQGKIVAEGSPKELKKRFGKTVRIVLEEPIKNF---ELLKEELLRVKN 257
E E + DRV IM G++ GS + LK +FGK +LE +KN E L E+LR+
Sbjct: 1440 EAEAVCDRVAIMVSGRLRCIGSIQHLKSKFGKD--YLLEMKVKNLAQVEPLHAEILRL-F 1496
Query: 258 VKDVRLARDDSFDVYFKSLDDSINGILQVISPQELKIKDIF------TATANFEDVYLEI 311
+ R R S VY ++D + + Q E K+K F + + E V+LE+
Sbjct: 1497 PQAARQERYSSLMVYKLPVED-VQPLAQAFFKLE-KVKQSFDLEEYSLSQSTLEQVFLEL 1554
>pir||C72267 ABC transporter, ATP-binding protein - Thermotoga maritima (strain
MSB8) >gi|4981886|gb|AAD36399.1|AE001787_4 (AE001787)
ABC transporter, ATP-binding protein [Thermotoga
maritima]
Length = 238
Score = 137 bits (341), Expect = 2e-31
Identities = 86/238 (36%), Positives = 138/238 (57%), Gaps = 8/238 (3%)
Query: 3 ILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSG 62
+LEV V KK+P PK + A+ VSF A G + + G NG+GKTT L++IA+ PD G
Sbjct: 1 MLEVIDVWKKYP-PKTQ--ALREVSFEAEEGSITAVFGENGSGKTTLLKVIASFLIPDRG 57
Query: 63 EVLVDGIDAVKNPLEVRKRIAYMT-QEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCED 121
+VL+D ++ V+ P ++++ T E LSV + + ++ + K+ E
Sbjct: 58 KVLIDSVNIVEKPSFAVEKVSISTGYERSFYYRLSVEENLKFFGMLNDLLGKTLKRETER 117
Query: 122 ILELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELI 181
+++ GL K+ +LSTG K+RV +A AL + DEP +GVD R++ K E++
Sbjct: 118 VMKELGLLECRKKRYMELSTGYKKRVDVARALMKKASIYIFDEPCSGVDLRTRLKIHEIM 177
Query: 182 KEKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFGKTVRIVLE 239
K +L++ G VI SHDL +++ +ADRVI++ +G+ V E SPK K+ +R +LE
Sbjct: 178 K-RLKESGRIVIFASHDLEDLK-IADRVIVLKKGEKVLEFSPK--KEDLAAVLRGILE 231
>gb|AAC62423.1| (AF084104) NatA [Bacillus firmus]
Length = 299
Score = 136 bits (340), Expect = 3e-31
Identities = 97/302 (32%), Positives = 158/302 (52%), Gaps = 21/302 (6%)
Query: 4 LEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSGE 63
L++ ++TK+F G+ +AV+ +S SGE+ G+LG NGAGKTTT RM+ + P GE
Sbjct: 3 LKINNITKRF----GQSVAVDQLSLEIPSGEMFGMLGANGAGKTTTFRMMLGLLEPTEGE 58
Query: 64 VLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCEDIL 123
+ G + V I Y+ +E L P L VRD +IY R +G K+D L
Sbjct: 59 MTWKGEKIDYSRTNV---IGYLPEERGLYPKLKVRDQLIYLGRLKGMHKKDIIPEMRMWL 115
Query: 124 ELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIKE 183
E F + + K+ +LS G ++++Q ++ L+ LDEP +G+DP + EL+KE
Sbjct: 116 ERFKVTDYETKRIEELSKGNQQKIQFIASVIHRPELLILDEPFSGLDPVNA----ELLKE 171
Query: 184 ---KLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFGKTVRIVLEE 240
L+ KG T++ +SH + VE L + I+ G V +G +E+K+ F + ++ E
Sbjct: 172 AVIDLKKKGTTIVFSSHRMDHVEELCQHLCILRHGTPVVKGELREIKRSFRN--KFIVIE 229
Query: 241 PIKNFELLKEELLRVKNVKD----VRLARDDSFDVYFKSLDDSINGILQVISPQELKIKD 296
++FE LK L VK + VRL +D + + +G ++ +E ++D
Sbjct: 230 GERSFETLK-NLPGVKKFQQKQGGVRLQVEDEEVAKVIFAEVAKSGYVRRFEVEEPSLQD 288
Query: 297 IF 298
IF
Sbjct: 289 IF 290
>dbj|BAB04885.1| (AP001511) ABC transporter (ATP-binding protein) [Bacillus
halodurans]
Length = 299
Score = 136 bits (340), Expect = 3e-31
Identities = 98/309 (31%), Positives = 158/309 (50%), Gaps = 35/309 (11%)
Query: 4 LEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSGE 63
L + VTKKF G AVNN+ S GE+ G+LG NGAGKTTT RMI + P G
Sbjct: 3 LTIDGVTKKF----GTFTAVNNLHVSVPKGEMFGMLGANGAGKTTTFRMILGLLEPTEGT 58
Query: 64 VLVDGIDAVKNPLEVRKR--IAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCED 121
I + PL + I Y+ +E L P L+V+D + Y R +G +D +K +
Sbjct: 59 -----IHWREQPLTYNQTNCIGYLPEERGLYPKLTVKDQLKYLGRLKGMKTQDIQKEMKM 113
Query: 122 ILELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELI 181
LE F + + HK+ QLS G ++++Q ++ L+ LDEP +G+DP + EL+
Sbjct: 114 WLERFEVPEYEHKRVEQLSKGNQQKIQFIASVLHRPELLILDEPFSGLDPVNV----ELL 169
Query: 182 KE---KLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFGKTVRIVL 238
K+ L+ +G T++ +SH + VE L + I+++G V EG+ K +K+ FGK
Sbjct: 170 KKAVIDLKKEGTTILFSSHRMEHVEELCQHLCILHRGSPVVEGNLKNIKRSFGK------ 223
Query: 239 EEPIKNFELLKEELLRVKNV---------KDVRLARDDSFDVYFKSLDDSINGILQVISP 289
+ I E E L+ + V ++A +++ + F+++ + G +Q
Sbjct: 224 KNVIIQGEFALEPLVDIPGVLRHQETSAGAKFQIANEETAKLLFQAV--ATAGFVQKFEL 281
Query: 290 QELKIKDIF 298
+E + DIF
Sbjct: 282 EEPSLHDIF 290
>pir||H69746 ABC transporter (binding protein) homolog ybdA - Bacillus subtilis
>gi|2632481|emb|CAB11989.1| (Z99105) similar to ABC
transporter (binding protein) [Bacillus subtilis]
>gi|3599617|dbj|BAA33092.1| (AB006424) ybdA [Bacillus
subtilis]
Length = 239
Score = 136 bits (339), Expect = 3e-31
Identities = 81/222 (36%), Positives = 134/222 (59%), Gaps = 11/222 (4%)
Query: 1 MPILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPD 60
M +++V++++K + G V ++SFS GE++ +LGPNGAGKTTT+R + +Y+PD
Sbjct: 1 MQLMQVQNLSKCYRNGDG----VEHLSFSIQRGEIVALLGPNGAGKTTTIRCLTGLYKPD 56
Query: 61 SGEVLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGF--SKRDAKKH 118
G++L++G + + V+K++A + +P L P L+ ++I FR RG+ K+D K+
Sbjct: 57 KGDILIEG--SPPGDINVQKKVALIPDQPYLYPALTAAEHI--QFRARGYHPGKKDVKER 112
Query: 119 CEDILELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTW 178
L+ L+ A++ QLS G K+RV LA A+ D L LDEPT G+D SK+
Sbjct: 113 VYHALKEVHLEEKANQLCGQLSRGQKQRVVLAGAIVQDALLYILDEPTVGLDIPSKQWLS 172
Query: 179 ELIKEKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAE 220
+K K D+G + +++H L V ADRVI++ GK++ +
Sbjct: 173 NWLKTK-TDQGCSAFVSTHSLEFVIETADRVILIRDGKLMQD 213
>pir||T22748 hypothetical protein F55G11.9 - Caenorhabditis elegans
>gi|3877692|emb|CAB05222.1| (Z82272) predicted using
Genefinder~contains similarity to Pfam domain: PF00005
(ABC transporter), Score=329.9, E-value=9.1e-96, N=2
[Caenorhabditis elegans]
Length = 1431
Score = 136 bits (339), Expect = 3e-31
Identities = 77/236 (32%), Positives = 128/236 (53%), Gaps = 11/236 (4%)
Query: 3 ILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSG 62
IL + + K F G+ AVN +S + + E G+LG NGAGKTTT +I + P G
Sbjct: 1128 ILVINGLIKDF----GKFRAVNGLSVTVDHEECFGMLGANGAGKTTTFDIITGLTMPTGG 1183
Query: 63 EVLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCEDI 122
V +DG D + I Y Q + +S R+ ++ +F+G++ + + + +
Sbjct: 1184 RVTIDGHDISRTI-----HIGYCPQFDAMLQQISCRETLMIMAKFQGYA--NVSEVVDLV 1236
Query: 123 LELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIK 182
L+ G+ +K S G KR++ + AL S + LDEPTAG+DPR++R+ W++I
Sbjct: 1237 LDCVGMADFGNKLVKNCSGGQKRKISVGIALMSRATCIILDEPTAGIDPRARREIWDIIH 1296
Query: 183 EKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFGKTVRIVL 238
E E +++LTSH + E E L R+ I+ G+++A G+ + LK ++G T + L
Sbjct: 1297 EMREQAKCSIVLTSHSMEECEALCTRIGILRNGEMIALGTSQSLKSQYGNTYMMTL 1352
Score = 120 bits (299), Expect = 2e-26
Identities = 73/230 (31%), Positives = 121/230 (51%), Gaps = 7/230 (3%)
Query: 22 AVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSGEVLVDGIDAVKNPLEVRKR 81
AVN +S A G+V +LG NG GK+TT MI +++ G V++ GIDA + RK
Sbjct: 462 AVNGLSLRAIRGQVSILLGHNGCGKSTTFGMITGMHKATEGRVIIGGIDANSHRAAARKM 521
Query: 82 IAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCEDILELFGLKTHAHKKPFQLST 141
I Y Q L L+V +++ +G SK K + +L+ L LS
Sbjct: 522 IGYCPQYNPLYDKLTVMEHLKLVNALKGGSKLTFKVEADSLLQQIELTDKRDTLAKNLSG 581
Query: 142 GLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIKEKLEDKGVTVILTSHDLYE 201
G+KR++ + A+ ++ LDEPTAG+DP ++ ++ D+ T++LT+H + E
Sbjct: 582 GMKRKLCVCMAMIGGSRVILLDEPTAGMDPSARIDVQRMLALVKADR--TILLTTHYMDE 639
Query: 202 VEYLADRVIIMNQGKIVAEGSPKELKKRFGKTVRIV-----LEEPIKNFE 246
E L D + +M+ GK+ A GS LK+++G + + + +P K++E
Sbjct: 640 AEKLGDWIFVMSHGKMAASGSNHYLKQKYGSGMLLTIVFKNIHDPKKSYE 689
>pir||T07714 probable ABC-type transport protein T23J7.80 - Arabidopsis thaliana
>gi|4741192|emb|CAB41858.1| (AL049746) ABC
transporter-like protein [Arabidopsis thaliana]
Length = 895
Score = 136 bits (339), Expect = 3e-31
Identities = 78/237 (32%), Positives = 131/237 (54%), Gaps = 7/237 (2%)
Query: 21 IAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSGEVLVDGIDAVKNPLEVRK 80
+AV +S + GE G+LGPNGAGKT+ + M+ + +P SG LV+ +D ++ +V
Sbjct: 592 MAVGGLSIAVPPGECFGMLGPNGAGKTSFINMMTGLVKPTSGTALVESLDICQDMDKVYT 651
Query: 81 RIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCEDILELFGLKTH--AHKKPFQ 138
+ Q L L+ R+++++Y R + D + E+ L+ L A K +
Sbjct: 652 SMGVCPQHDLLWETLTGREHLLFYGRLKNLKGSDLNQAIEESLKSVNLSREGVADKPAGK 711
Query: 139 LSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIKEKLEDKGVTVILTSHD 198
S G+KRR+ +A +L +V++DEP+ G+DP S+R W IK K +ILT+H
Sbjct: 712 YSGGMKRRLSVAISLIGSPKVVYMDEPSTGLDPASRRSLWTAIKG--AKKHTAIILTTHS 769
Query: 199 LYEVEYLADRVIIMNQGKIVAEGSPKELKKRFGKTVRIVL---EEPIKNFELLKEEL 252
+ E E+L DR+ I G++ G+PKELK R+G + + + E K+ E+L +++
Sbjct: 770 MEEAEFLCDRLGIFVDGRLQCVGNPKELKARYGGSYVLTMTTSSEHEKDVEMLIQDV 826
>pir||E72378 sugar ABC transporter, ATP-binding protein - Thermotoga maritima
(strain MSB8) >gi|4980927|gb|AAD35506.1|AE001721_5
(AE001721) sugar ABC transporter, ATP-binding protein
[Thermotoga maritima]
Length = 359
Score = 136 bits (339), Expect = 3e-31
Identities = 97/298 (32%), Positives = 152/298 (50%), Gaps = 15/298 (5%)
Query: 1 MPILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPD 60
MP + V ++ K F G+V AV+ VSF GE + +LGP+G GKTTTL M+A IY+P
Sbjct: 1 MPSIRVVNLKKYF----GKVKAVDGVSFEVKDGEFVALLGPSGCGKTTTLLMLAGIYKPT 56
Query: 61 SGEVLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCE 120
SGE+ D + P + R+ + + Q L P ++V + I + R R SK + +K
Sbjct: 57 SGEIYFDDVLVNDIPPKYRE-VGMVFQNYALYPHMTVFENIAFPLRARRISKDEVEKRVV 115
Query: 121 DILELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWEL 180
+I + +KP QLS G ++RV LA AL ++ DEP + +D +
Sbjct: 116 EIARKLLIDNLLDRKPTQLSGGQQQRVALARALVKQPKVLLFDEPLSNLDANLRMIMRAE 175
Query: 181 IKEKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKEL----KKRFGKTVRI 236
IK ++ G+T + +HD E +A R+ + NQGK+V G+P E+ K F V
Sbjct: 176 IKHLQQELGITSVYVTHDQAEAMTMASRIAVFNQGKLVQYGTPDEVYDSPKNMF---VAS 232
Query: 237 VLEEPIKNFELLKEELLRVKNVKDVRLARDDSFDVYFKSLDDSINGILQVISPQELKI 294
+ P NF L++ + V+N K L RDD + +D + ++ I P+ +I
Sbjct: 233 FIGNPPTNF--LRDFSVSVEN-KQTILKRDDVIIKLPEPVDVKLKEVVVGIRPEHCRI 287
>pir||T07717 probable ABC-type transport protein T23J7.110 - Arabidopsis
thaliana >gi|4741195|emb|CAB41861.1| (AL049746) ABC
transporter-like protein [Arabidopsis thaliana]
Length = 900
Score = 136 bits (338), Expect = 4e-31
Identities = 92/304 (30%), Positives = 157/304 (51%), Gaps = 22/304 (7%)
Query: 21 IAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSGEVLVDGIDAVKNPLEVRK 80
+AV +S + SGE G+LGPNGAGKT+ + M+ + +P SG LV G+D + V
Sbjct: 597 LAVRGLSLAVPSGECFGMLGPNGAGKTSFINMMTGLLKPTSGTALVQGLDICNDMDRVYT 656
Query: 81 RIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCEDILELFGL--KTHAHKKPFQ 138
+ Q L L+ R+++++Y R + D + E+ L+ L A K +
Sbjct: 657 SMGVCPQHDLLWETLTGREHLLFYGRLKNLKGADLNQAVEESLKSVNLFHGGVADKPAGK 716
Query: 139 LSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIKEKLEDKGVTVILTSHD 198
S G+KRR+ +A +L + +V++DEP+ G+DP S++ W +IK ++ +ILT+H
Sbjct: 717 YSGGMKRRLSVAISLIGNPKVVYMDEPSTGLDPASRKNLWTVIKRAKQN--TAIILTTHS 774
Query: 199 LYEVEYLADRVIIMNQGKIVAEGSPKELKKRFGKTVRIVL---EEPIKNFE-LLKEELLR 254
+ E E+L DR+ I G + G+PKELK R+G + + E +N E L+K+
Sbjct: 775 MEEAEFLCDRLGIFVDGGLQCIGNPKELKGRYGGSYVFTMTTSSEHEQNVEKLIKDVSPN 834
Query: 255 VKNVKDVRLARDDSFDVYFKSLDDSINGILQVISPQELKIKDIFT------ATANFEDVY 308
K + +A F++ + + I+ + Q + K K FT A EDV+
Sbjct: 835 AKKI--YHIAGTQKFELPKEEV--RISEVFQAVE----KAKSNFTVFAWGLADTTLEDVF 886
Query: 309 LEII 312
++++
Sbjct: 887 IKVV 890
>pir||F72742 probable transport ATP-binding protein APE0471 - Aeropyrum pernix
(strain K1) >gi|5104118|dbj|BAA79434.1| (AP000059) 356aa
long hypothetical transport ATP-binding protein
[Aeropyrum pernix]
Length = 356
Score = 136 bits (338), Expect = 4e-31
Identities = 102/314 (32%), Positives = 164/314 (51%), Gaps = 24/314 (7%)
Query: 3 ILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSG 62
++EV+ + K++ G V A+ VSFS SGEV G LGPNGAGKTTT+R++ RP SG
Sbjct: 57 VIEVEGLVKRY----GSVEALRGVSFSVLSGEVFGYLGPNGAGKTTTIRVLMGFSRPTSG 112
Query: 63 EVLVDGIDAVKNP--LEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCE 120
V G++ + NP VR+R+ Y+ E + +S + Y+ R G R +
Sbjct: 113 SARVFGVE-LYNPGASGVRRRVGYVPGEFEFYGGVSGGRMLDYWCRLVGGCSRGVVR--- 168
Query: 121 DILELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWEL 180
++LE F L + S G+K+ + L A S + LV +DEPT G+DP ++ + +
Sbjct: 169 ELLEAFPLPLERAVGTY--SRGMKQMLALVMAFSHEPDLVVMDEPTTGLDPLARGRVLDF 226
Query: 181 IKEKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFGKTVRIVLEE 240
++ K + GVTV +SH L EV+ +ADRV ++ G +VA L ++ GK V+ +
Sbjct: 227 VRSKARE-GVTVFFSSHVLSEVQRVADRVGLLRSGVLVALEDVSSLLRKSGKVVKARVS- 284
Query: 241 PIKNFELLKEELLRVKNVKDVRLARDDSFDVYFKSLDDSINGILQVISPQELKIKDIFTA 300
KN L + L V V+ +R + V +S+ +L ++L+++D
Sbjct: 285 --KN---LSPDRLAVDGVRVIRSNGELELVVTSGKALESVLRMLLDAGLEDLEVRD---- 335
Query: 301 TANFEDVYLEIIER 314
A E+V++ ER
Sbjct: 336 -ATLEEVFMHFYER 348
>sp|P36879|YADG_ECOLI HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PROTEIN YADG
>gi|628771|pir||S45204 probable ABC-type transport
protein yagD - Escherichia coli
>gi|473794|dbj|BAA05583.1| (D26562) 'ORF' [Escherichia
coli] >gi|1786319|gb|AAC73238.1| (AE000122) putative
ATP-binding component of a transport system [Escherichia
coli K12]
Length = 308
Score = 135 bits (337), Expect = 6e-31
Identities = 91/306 (29%), Positives = 162/306 (52%), Gaps = 15/306 (4%)
Query: 4 LEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSGE 63
LE++ + K +P G V A+ + +G+ +LGPNGAGK+TT+ +I+++ SG
Sbjct: 5 LELQQLKKTYP---GGVQALRGIDLQVEAGDFYALLGPNGAGKSTTIGIISSLVNKTSGR 61
Query: 64 VLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCEDIL 123
V V G D K+ + ++++ + QE + P +V+ ++ + G +++A E L
Sbjct: 62 VSVFGYDLEKDVVNAKRQLGLVPQEFNFNPFETVQQIVVNQAGYYGVERKEAYIRSEKYL 121
Query: 124 ELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIKE 183
+ L +++ LS G+KRR+ +A AL + L+ LDEPTAGVD +R W +K+
Sbjct: 122 KQLDLWGKRNERARMLSGGMKRRLMIARALMHEPKLLILDEPTAGVDIELRRSMWGFLKD 181
Query: 184 KLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFGKTVRIVLE---- 239
L DKG T+ILT+H L E E L + I+ G++V S K L + K+ +L+
Sbjct: 182 -LNDKGTTIILTTHYLEEAEMLCRNIGIIQHGELVENTSMKALLAKL-KSETFILDLAPK 239
Query: 240 EPIKNFELLKEELLRVKNVKDVRLARDDSFDVYFKSLDDSINGILQVISPQEL--KIKDI 297
P+ + + L+ + +V + R+ + F L + GI QV+S + +++++
Sbjct: 240 SPLPKLDGYQYRLVDTATL-EVEVLREQGINSVFTQLSE--QGI-QVLSMRNKANRLEEL 295
Query: 298 FTATAN 303
F + N
Sbjct: 296 FVSLVN 301
>pir||C75593 probable ABC transporter, ATP-binding protein - Deinococcus
radiodurans (strain R1)
>gi|6460585|gb|AAF12291.1|AE001862_117 (AE001862) ABC
transporter, ATP-binding protein, putative [Deinococcus
radiodurans]
Length = 301
Score = 135 bits (337), Expect = 6e-31
Identities = 95/295 (32%), Positives = 154/295 (52%), Gaps = 20/295 (6%)
Query: 18 GEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSGEVLVDGIDAVKNPLE 77
G V A+++ + + +GE+ +LGPNGAGK+T + ++ + P +G+V V G D +N +
Sbjct: 13 GHVTALSDFNLTLRTGELTALLGPNGAGKSTAIGLLLGLSAPSAGQVRVLGADPRRN--D 70
Query: 78 VRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCEDILELFGLKTHAHKKPF 137
VR RI M QE L L+VR+ + + F A ++ L L L A ++
Sbjct: 71 VRARIGAMPQESALPAGLTVREAVTLFASF-----YPAPLGVDEALALADLGPVAGRRAA 125
Query: 138 QLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIKEKLEDKGVTVILTSH 197
QLS G KRR+ A A+ D L+ +DEPT G+D +S+ WE + L +G T++LT+H
Sbjct: 126 QLSGGQKRRLAFALAVVGDPELLLIDEPTTGMDAQSRAAFWEAV-TGLRARGRTILLTTH 184
Query: 198 DLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFGKTVRIVLEEPIKNFELLKEELLRVKN 257
L E E ADRV++MN G+I+A+ +P+ L+ G R+ +L++ EL R+
Sbjct: 185 YLEEAERTADRVVVMNGGRILADDTPQGLRSGVG-GARVSFVS-----DLVQAELERLPG 238
Query: 258 VKDVRLARDDSFDVYFKSLDDSI-NGILQVISPQELKIKDIFTATANFEDVYLEI 311
V V++ D L S+ +L + D+ A E+ YL++
Sbjct: 239 VSAVQVDAAGRAD-----LRTSVPEALLAALIGSGTTFSDLEVRRATLEEAYLQL 288
>pir||T27121 hypothetical protein Y53C10A.9 - Caenorhabditis elegans
>gi|3947655|emb|CAA22142.1| (AL033536) predicted using
Genefinder~contains similarity to Pfam domain: PF00005
(ABC transporter), Score=319.4, E-value=1.4e-92, N=2~cDNA
EST yk93b1.5 comes from this gene~cDNA EST yk208d6.3
comes from this gene~cDNA EST yk208d6.5 comes from this
gene
Length = 1564
Score = 135 bits (336), Expect = 7e-31
Identities = 77/236 (32%), Positives = 125/236 (52%), Gaps = 11/236 (4%)
Query: 3 ILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSG 62
+L + + K F G+ AVN++S S E G+LG NGAGKTTT +I + P G
Sbjct: 1249 VLVIDGLVKDF----GKFRAVNDLSISVGHEECFGMLGANGAGKTTTFDIITGLTMPTGG 1304
Query: 63 EVLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCEDI 122
+DG D + I Y Q + +S R + + +G+ + K+ E +
Sbjct: 1305 SATIDGHDITETI-----HIGYCPQFDAMLQQISCRQTLRIMAKLQGYP--NVKEVVELV 1357
Query: 123 LELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIK 182
L+ G+ +K S G KR++ + AL S + LDEPTAG+DPR++R+ W++I
Sbjct: 1358 LDCVGMSDFGYKLVKNCSGGQKRKISVGIALMSRATCIILDEPTAGIDPRARREIWDIIH 1417
Query: 183 EKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFGKTVRIVL 238
E E +++LTSH + E E L R+ I+ +G+++A G+ + LK ++G T + L
Sbjct: 1418 EMREQAKCSIVLTSHSMEECEALCTRIGILRKGEMIALGTSQSLKSQYGNTYMMTL 1473
Score = 117 bits (290), Expect = 2e-25
Identities = 72/218 (33%), Positives = 118/218 (54%), Gaps = 3/218 (1%)
Query: 22 AVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSGEVLVDGIDAVKNPLEVRKR 81
AVN +S A G+V +LG NG GK+TT MI +++ G+V++ GIDA N E R+
Sbjct: 466 AVNGLSLRAIRGQVSILLGHNGCGKSTTFGMITGMHQATEGKVMIGGIDANANRAEAREL 525
Query: 82 IAYMTQEPDLTPPLSVRDYIIYYFRFRGFS-KRDAKKHCEDILELFGLKTHAHKKPFQLS 140
I Y Q + L+V +++ +G S D K E +L+ L + LS
Sbjct: 526 IGYCPQYNPIYDELTVWEHLRLVNALKGRSGGSDFKMDAESLLKQIELTDKRNTLAKNLS 585
Query: 141 TGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIKEKLEDKGVTVILTSHDLY 200
G+KR++ + A+ ++ LDEPTAG+DP ++ ++ D+ T++LT+H +
Sbjct: 586 GGMKRKLCVCMAMIGGSRVILLDEPTAGMDPSARIDVQNMLALVKADR--TILLTTHYMD 643
Query: 201 EVEYLADRVIIMNQGKIVAEGSPKELKKRFGKTVRIVL 238
E E L D + +M+ GK+ A GS LK+++G + + L
Sbjct: 644 EAEKLGDWIFVMSHGKMAASGSKHYLKQKYGGGMLLTL 681
>dbj|BAB10070.1| (AB010069) contains similarity to ABC transporter~gene_id:K11J9.23
[Arabidopsis thaliana]
Length = 917
Score = 135 bits (336), Expect = 7e-31
Identities = 93/311 (29%), Positives = 155/311 (48%), Gaps = 38/311 (12%)
Query: 21 IAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSGEVLVDGIDAVKNPLEVRK 80
+AV + S +SGE G+LGPNGAGKT+ + M+ + +P SG LV G+D K+ +V
Sbjct: 614 MAVRGLYLSVSSGECFGMLGPNGAGKTSFISMMTGLLKPSSGTALVQGLDICKDMNKVYT 673
Query: 81 RIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCEDILELFGLKTH--AHKKPFQ 138
+ Q L L+ R+++++Y R + D + E+ L+ L K
Sbjct: 674 SMGVCPQHDLLWETLTGREHLLFYGRLKNIKGSDLTQAVEESLKSVSLYDGGVGDKPAGN 733
Query: 139 LSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIKEKLEDKGVTVILTSHD 198
S G+KRR+ +A +L + +V+LDEP+ G+DP S++ W +IK ++ +ILT+H
Sbjct: 734 YSGGMKRRLSVAISLIGNPKVVYLDEPSTGLDPASRKNLWNVIKRAKQN--TAIILTTHS 791
Query: 199 LYEVEYLADRVIIMNQGKIVAEGSPKELKKRFGKTVRIVLEEPIKNFELLKEELLRVK-N 257
+ E E+L DR+ I G + G+ KELK R+G + + K+ E ++ + V N
Sbjct: 792 MEEAEFLCDRLGIFVDGGLQCIGNSKELKSRYGGSYVFTMTTSSKHEEEVERLVESVSPN 851
Query: 258 VKDV-RLARDDSFDVYFKSLDDSINGILQVISPQELKIKDIFTAT----ANF-------- 304
K + LA F+ + QE++I ++F A ANF
Sbjct: 852 AKKIYHLAGTQKFE----------------LPKQEVRIAEVFRAVEKAKANFTVFAWGLA 895
Query: 305 ----EDVYLEI 311
EDV++++
Sbjct: 896 DTTLEDVFIKV 906
>pir||C65111 probable ABC transporter (ntrA/rpoN 5'region) - Escherichia coli
(strain K-12) >gi|606140|gb|AAA58003.1| (U18997)
ORF_o241 [Escherichia coli] >gi|1789593|gb|AAC76233.1|
(AE000399) putative ATP-binding component of a transport
system [Escherichia coli K12]
Length = 241
Score = 134 bits (335), Expect = 1e-30
Identities = 83/229 (36%), Positives = 129/229 (56%), Gaps = 8/229 (3%)
Query: 1 MPILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPD 60
M L K++ K + KG + V +VS + NSGE++G+LGPNGAGKTTT M+ I D
Sbjct: 1 MATLTAKNLAKAY---KGRRV-VEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRD 56
Query: 61 SGEVLVDGIDAVKNPLEVRKR--IAYMTQEPDLTPPLSVRDYIIYYFRFR-GFSKRDAKK 117
+G +++D D PL R R I Y+ QE + LSV D ++ + R S +
Sbjct: 57 AGNIIIDDDDISLLPLHARARRGIGYLPQEASIFRRLSVYDNLMAVLQIRDDLSAEQRED 116
Query: 118 HCEDILELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKT 177
+++E F ++ LS G +RRV++A AL+++ + LDEP AGVDP S
Sbjct: 117 RANELMEEFHIEHLRDSMGQSLSGGERRRVEIARALAANPKFILLDEPFAGVDPISVIDI 176
Query: 178 WELIKEKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKEL 226
+I E L D G+ V++T H++ E + +R I++QG ++A G+P E+
Sbjct: 177 KRII-EHLRDSGLGVLITDHNVRETLAVCERAYIVSQGHLIAHGTPTEI 224
>gb|AAF44814.1|AE003406_19 (AE003416) symbol=BG:DS00797.5; prediction=method:''genscan'',
version:''1.0; Date run: 19-Nov-98; Time: 17:00:23'',
score:''296.08''; cDNA=method:''sim4'', score:''990.0'',
desc:''CK01017 Drosophila melanogaster embryo
BlueScript, full length mRNA seq>
Length = 1544
Score = 134 bits (335), Expect = 1e-30
Identities = 87/307 (28%), Positives = 162/307 (52%), Gaps = 9/307 (2%)
Query: 6 VKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSGEVL 65
+ + KKF T K + + +N++ + N+ E+ +LG NGAGKTT + MI + DSG+++
Sbjct: 410 ITELCKKFQTSKRDTLISDNLNMTINNKEITVLLGHNGAGKTTMMNMIMGLVPKDSGKII 469
Query: 66 VDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCEDILEL 125
V + ++ R I + Q ++ ++ ++ + RG + DA+ ++ L+
Sbjct: 470 VC---SERDVASYRHLIGFCPQHSVFMSYMTCHQHLEFFAQLRGACRSDARDWADEKLKK 526
Query: 126 FGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIKEKL 185
GL ++ LS G+KRR+ L A++ + +V LDEP++G+D S+R+ W+++
Sbjct: 527 LGLSDKRNEFGKNLSGGMKRRLSLGIAIAGNTKIVILDEPSSGLDINSRRELWDILLNLR 586
Query: 186 EDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFGKTVRIVLEEPIKNF 245
++K V++T+H + E E L D + I+ GK+ + GSP ELK++ G R+ LE I +F
Sbjct: 587 KEK--AVLVTTHYMEEAEVLGDTICILANGKLQSIGSPLELKRKSGIGYRLKLE--INDF 642
Query: 246 ELLKEELLRVKN--VKDVRLARDDSFDVYFKSLDDSINGILQVISPQELKIKDIFTATAN 303
+ E++ + + V R+ + VY N Q++ E + K++ T +
Sbjct: 643 TSREVEIMEIIHHFVPTARVLNVVNPTVYICLPYAYKNCFAQMLYRLETESKELGIHTIS 702
Query: 304 FEDVYLE 310
D LE
Sbjct: 703 MTDTSLE 709
Score = 131 bits (327), Expect = 8e-30
Identities = 82/228 (35%), Positives = 121/228 (52%), Gaps = 7/228 (3%)
Query: 18 GEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSGEVLVDGIDAVKNPLE 77
G+ +AV+ VSF+A GE G+LG NGAGKT+T +MIA D G + + G D ++ L+
Sbjct: 1212 GDKLAVDGVSFAAAQGECFGLLGVNGAGKTSTFQMIAANLPLDGGTIRIKGADIREHELK 1271
Query: 78 VRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKR------DAKKHCEDILELFGLKTH 131
R+ Y Q L ++ + Y RG S+R K+H + LE L +
Sbjct: 1272 YREYFGYCPQYDALNKFMTAEQCLYYMALLRGLSRRRTDGPASCKEHVKYWLEKMHLTKY 1331
Query: 132 AHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIKEKLEDKGVT 191
+ S G KR++ A A+ LV LDEPT GVDP S+R W+ IK+ + K T
Sbjct: 1332 QKVQVRHYSGGTKRKLLAAMAMIGAPALVLLDEPTTGVDPISRRFLWQCIKD-FQGKDRT 1390
Query: 192 VILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFGKTVRIVLE 239
V+LTSH + E E L +R+ IM GK + LK+ G T+++ ++
Sbjct: 1391 VVLTSHSMDECEELCNRLAIMAHGKFKCLNNICALKRLSGFTIKLKMK 1438
>gb|AAF53328.1| (AE003641) CG7491 gene product [Drosophila melanogaster]
Length = 324
Score = 134 bits (335), Expect = 1e-30
Identities = 87/307 (28%), Positives = 162/307 (52%), Gaps = 9/307 (2%)
Query: 6 VKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSGEVL 65
+ + KKF T K + + +N++ + N+ E+ +LG NGAGKTT + MI + DSG+++
Sbjct: 20 ITELCKKFQTSKRDTLISDNLNMTINNKEITVLLGHNGAGKTTMMNMIMGLVPKDSGKII 79
Query: 66 VDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCEDILEL 125
V + ++ R I + Q ++ ++ ++ + RG + DA+ ++ L+
Sbjct: 80 VC---SERDVASYRHLIGFCPQHSVFMSYMTCHQHLEFFAQLRGACRSDARDWADEKLKK 136
Query: 126 FGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIKEKL 185
GL ++ LS G+KRR+ L A++ + +V LDEP++G+D S+R+ W+++
Sbjct: 137 LGLSDKRNEFGKNLSGGMKRRLSLGIAIAGNTKIVILDEPSSGLDINSRRELWDILLNLR 196
Query: 186 EDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFGKTVRIVLEEPIKNF 245
++K V++T+H + E E L D + I+ GK+ + GSP ELK++ G R+ LE I +F
Sbjct: 197 KEK--AVLVTTHYMEEAEVLGDTICILANGKLQSIGSPLELKRKSGIGYRLKLE--INDF 252
Query: 246 ELLKEELLRVKN--VKDVRLARDDSFDVYFKSLDDSINGILQVISPQELKIKDIFTATAN 303
+ E++ + + V R+ + VY N Q++ E + K++ T +
Sbjct: 253 TSREVEIMEIIHHFVPTARVLNVVNPTVYICLPYAYKNCFAQMLYRLETESKELGIHTIS 312
Query: 304 FEDVYLE 310
D LE
Sbjct: 313 MTDTSLE 319
>gi|11499064 ABC transporter, ATP-binding protein [Archaeoglobus fulgidus]
>gi|7445944|pir||D69433 ABC transporter, ATP-binding
protein homolog - Archaeoglobus fulgidus
>gi|2649101|gb|AAB89781.1| (AE001001) ABC transporter,
ATP-binding protein [Archaeoglobus fulgidus]
Length = 226
Score = 134 bits (334), Expect = 1e-30
Identities = 75/226 (33%), Positives = 135/226 (59%), Gaps = 8/226 (3%)
Query: 1 MPILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPD 60
M ++E+ V K + T EV A++ VS +GE + I+GP+G+GK+T L MI + +P
Sbjct: 1 MKVIELVDVYKIYRTAYYEVHALDGVSMEVEAGEFVAIMGPSGSGKSTLLNMIGCLDKPT 60
Query: 61 SGEVLVDGI------DAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRD 114
GEV+++G+ D L R I ++ Q+ +L P L+ + + FRG ++ +
Sbjct: 61 KGEVIINGVKTSGLSDRELTKLR-RDSIGFIFQQYNLIPTLTALENVELPMIFRGVARAE 119
Query: 115 AKKHCEDILELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSK 174
++ +++L++ G++ A ++P ++S G ++RV +A AL+++ ++ DEPT +D +S
Sbjct: 120 RERRAKELLKVVGIEELADRRPREMSGGQQQRVAIARALANNPKILLCDEPTGNLDTKSG 179
Query: 175 RKTWELIKEKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAE 220
R+ ++K E+ GVTV+L +HD EY ADRVI + GK+V +
Sbjct: 180 RQVMGILKNLNEENGVTVVLVTHDPSLSEY-ADRVIRIRDGKVVED 224
>pir||G64435 cobalt transport ATP-binding protein O homolog - Methanococcus
jannaschii >gi|1591732|gb|AAB99089.1| (U67551) cobalt
transport ATP-binding protein (cbiO) [Methanococcus
jannaschii]
Length = 279
Score = 134 bits (333), Expect = 2e-30
Identities = 82/231 (35%), Positives = 131/231 (56%), Gaps = 10/231 (4%)
Query: 1 MPILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPD 60
M I+E K + ++P + +N F GE++ +LGPNGAGK+T I RP
Sbjct: 1 MYIVETKDLYFRYPDGTAVLKGIN---FKVKKGEMVSLLGPNGAGKSTLFLHFNGILRPT 57
Query: 61 SGEVLVDGIDAV---KNPLEVRKRIAYMTQEPD--LTPPLSVRDYIIYYFRFRGFSKRDA 115
GEVL+ G K+ +EVRK + + Q PD + P +V++ + + G K +
Sbjct: 58 KGEVLIKGKPIKYDKKSLVEVRKTVGLVFQNPDDQIFAP-TVKEDVAFGPLNLGLPKEEV 116
Query: 116 KKHCEDILELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKR 175
+K ++ L+ G++ +K P LS G K+RV +A L+ ++ LDEPTAG+DP
Sbjct: 117 EKRVKEALKAVGMEGFENKPPHHLSGGQKKRVAIAGILAMQPEVIVLDEPTAGLDPVGAS 176
Query: 176 KTWELIKEKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKEL 226
K +L+ + L KG+T+I+++HD+ V AD+V +M GKI+ EG+PKE+
Sbjct: 177 KIMKLLYD-LNKKGMTIIISTHDVDLVPVYADKVYVMYDGKILKEGTPKEV 226
>pir||E82065 ABC transporter, ATP-binding protein VC2528 [imported] - Vibrio
cholerae (group O1 strain N16961)
>gi|2317737|gb|AAC46369.1| (AF013987) putative ABC
transporter ATP-binding protein [Vibrio cholerae]
>gi|9657111|gb|AAF95669.1| (AE004322) ABC transporter,
ATP-binding protein [Vibrio cholerae]
Length = 241
Score = 134 bits (333), Expect = 2e-30
Identities = 80/229 (34%), Positives = 132/229 (56%), Gaps = 8/229 (3%)
Query: 1 MPILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPD 60
M IL+ + + K + K V++VS SG+++G+LGPNGAGKTT+ MI + D
Sbjct: 1 MAILKAQHLAKSYKKRK----VVSDVSLQVESGQIVGLLGPNGAGKTTSFYMIVGLVARD 56
Query: 61 SGEVLVDGIDAVKNPLEVRKR--IAYMTQEPDLTPPLSVRDYIIYYFRFR-GFSKRDAKK 117
G + +D D P+ R R I Y+ QE + LSV D I+ + R + + +
Sbjct: 57 EGTITIDDNDISILPMHSRSRMGIGYLPQEASIFRKLSVEDNIMAVLQTREELTHEERQD 116
Query: 118 HCEDILELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKT 177
ED+LE F ++ LS G +RRV++A AL+++ + LDEP AGVDP S
Sbjct: 117 KLEDLLEEFHIQHIRKSAGMALSGGERRRVEIARALAANPQFILLDEPFAGVDPISVIDI 176
Query: 178 WELIKEKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKEL 226
++I E L D+G+ V++T H++ E + ++ I++QG+++AEG+P+++
Sbjct: 177 KKII-EHLRDRGLGVLITDHNVRETLDVCEKAYIVSQGRLIAEGTPQDV 224
>pir||A75083 ATP-binding transport protein PAB1668 - Pyrococcus abyssi (strain
Orsay) >gi|5458478|emb|CAB49966.1| (AJ248286)
ATP-BINDING TRANSPORT PROTEIN [Pyrococcus abyssi]
Length = 315
Score = 134 bits (333), Expect = 2e-30
Identities = 81/275 (29%), Positives = 147/275 (53%), Gaps = 10/275 (3%)
Query: 3 ILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSG 62
I+E K +TK F G+ V N++ G V G LGPNGAGKTTT++M+ +P G
Sbjct: 5 IIETKELTKFF----GKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYG 60
Query: 63 EVLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCEDI 122
E+ + G++ + +++ + + YM + P +++ ++++Y R G K A ++
Sbjct: 61 EIKIIGMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQAREL 120
Query: 123 LELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIK 182
+ G+ A K +LS+G ++RV A AL D L+ LDEPT+ +DP + + I
Sbjct: 121 MAYTGVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKIL 180
Query: 183 EKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFGKTVRIVLEEPI 242
E L G TV ++SH + E+E + + V ++ G+++ +G ++L K +V+ +
Sbjct: 181 E-LAKSGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAKIESTDYDVVVSDNE 239
Query: 243 KNFELLKEELLRVKNVKD----VRLARDDSFDVYF 273
K + L++++ V+ V + VR+ D+ F F
Sbjct: 240 KLLKFLRDKIY-VREVWEEEGIVRVKLDERFSEKF 273
>dbj|BAB07200.1| (AP001518) ABC transporter (ATP-binding protein) [Bacillus
halodurans]
Length = 338
Score = 134 bits (333), Expect = 2e-30
Identities = 78/244 (31%), Positives = 135/244 (54%), Gaps = 12/244 (4%)
Query: 3 ILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSG 62
++ + + K F +G V AV+ V+ N GE+ G++G +GAGK+T +RM+ + RP G
Sbjct: 1 MISLDGIRKVFKAKRGSVTAVDGVNLKINEGEIFGVIGYSGAGKSTLIRMLNMLERPTEG 60
Query: 63 EVLVDGIDAVK---NPLEV-RKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKH 118
V+V G D K L + R++I + Q +L +VR I + G K++ +K
Sbjct: 61 SVIVAGKDLSKLSDRDLRIERQKIGMIFQHFNLLWSRTVRKNIAFPLEIAGVPKKEREKR 120
Query: 119 CEDILELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTW 178
++++ L GL+ P QLS G K+RV +A AL+++ ++ DE T+ +DP++
Sbjct: 121 VDELINLVGLEGREEAYPSQLSGGQKQRVGIARALANNPKVLLCDEATSALDPKTTDSIL 180
Query: 179 ELIKEKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEG-------SPKE-LKKRF 230
+L+ + E G+T++L +H+++ + + RV +M GK+V EG PKE + K F
Sbjct: 181 DLLVDINEKLGLTIVLITHEMHVIRKICHRVAVMEAGKVVEEGPVLDVFRKPKEHITKEF 240
Query: 231 GKTV 234
K V
Sbjct: 241 VKQV 244
>pir||F72756 probable multiple sugar-binding transport ATP-binding protein
APE0043 - Aeropyrum pernix (strain K1)
>gi|5103431|dbj|BAA78952.1| (AP000058) 381aa long
hypothetical multiple sugar-binding transport
ATP-binding protein [Aeropyrum pernix]
Length = 381
Score = 133 bits (332), Expect = 2e-30
Identities = 80/234 (34%), Positives = 132/234 (56%), Gaps = 11/234 (4%)
Query: 1 MPILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPD 60
M + ++ V K+F G+V+AV++V S GE +LGP+G GKTTTLR+IA + PD
Sbjct: 14 MAEIRLEGVVKRF----GKVVAVDHVDLSIKDGEFFVLLGPSGCGKTTTLRLIAGLEYPD 69
Query: 61 SGEVLVDGIDAV-KNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFR----GFSKRDA 115
G +L+DG D K+P + + +A + Q L P +SV D I + R G +K D
Sbjct: 70 EGRILIDGEDVTFKDPKD--RNVAMVFQNYALYPHMSVFDNIAFTLHLRRKEMGLTKDDI 127
Query: 116 KKHCEDILELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKR 175
++ ++ +L ++ +KP QLS G ++RV LA AL + +DEP + +D +
Sbjct: 128 RRRVIEVAKLLRIEDLLDRKPGQLSGGQQQRVALARALVRRPKVWLMDEPLSNLDALLRL 187
Query: 176 KTWELIKEKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKR 229
+K+ +D +T + +HD E +ADR+ +MN+G++V G+P+E+ R
Sbjct: 188 AMRAELKKLQKDLKITTVYVTHDQAEAMSMADRIAVMNKGRVVQVGTPEEVYMR 241
>pir||G75548 ABC transporter, ATP-binding protein - Deinococcus radiodurans
(strain R1) >gi|6457873|gb|AAF09790.1|AE001882_8
(AE001882) ABC transporter, ATP-binding protein
[Deinococcus radiodurans]
Length = 354
Score = 133 bits (332), Expect = 2e-30
Identities = 87/234 (37%), Positives = 133/234 (56%), Gaps = 11/234 (4%)
Query: 2 PILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDS 61
P++EV+ + K F AV ++SFS +GE++G LGPNGAGK+TT++++ + PDS
Sbjct: 45 PMIEVRHLCKSFARKP----AVQDISFSIPAGEIVGYLGPNGAGKSTTIKVLTGLLVPDS 100
Query: 62 GEVLVDGIDAVKNPLEVRKRI-AYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCE 120
GEV V G+ K + R+ A Q L L VR+ + R + A + E
Sbjct: 101 GEVRVGGLVPWKQRRQHVARLGAVFGQRTTLWWDLPVRESLEL---LRHVYRVPAARFAE 157
Query: 121 DIL---ELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKT 177
++ EL L + LS G + R LA AL D L+FLDEPT G+D +K +
Sbjct: 158 NLAGFTELLELGPFLNTPARALSLGQRMRADLAAALLHDPELLFLDEPTVGLDVVAKERI 217
Query: 178 WELIKEKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFG 231
E +K ++GVTV+LT+HDL +VE LA RV++++ G+++ +G EL+ R+G
Sbjct: 218 REFVKAVNAERGVTVLLTTHDLGDVERLARRVMMIDTGRLLFDGPLAELQARYG 271
>gb|AAF81232.1| (AF263012) ABC transporter ATP binding protein [Streptomyces
griseus subsp. griseus]
Length = 318
Score = 133 bits (332), Expect = 2e-30
Identities = 85/239 (35%), Positives = 135/239 (55%), Gaps = 12/239 (5%)
Query: 2 PILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDS 61
P++E VTKKF G+ A++ ++ + G V G LGPNGAGK+TT+RM+ + RP S
Sbjct: 3 PLIECTDVTKKF----GDFTALSRLNLTVPQGVVYGYLGPNGAGKSTTIRMLMGLSRPTS 58
Query: 62 GEVLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCED 121
G+V V G D EVR+RI Y+ E L L++ + + R RG + + ++
Sbjct: 59 GQVRVLGQDPTDP--EVRRRIGYLPGELRLDERLTIGQTLASWGRLRGLTD---TAYRDE 113
Query: 122 ILELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELI 181
+++ FG+ ++ LSTG +R+V L A + L+ LDEPT G+DP ++ +
Sbjct: 114 LVQRFGI--DPSRRVRGLSTGNRRKVGLVGAFMAKPELLILDEPTNGLDPLMQQVFLATV 171
Query: 182 KEKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFGKTVRIVLEE 240
E+ D G +V+L+SH L EVE +AD V ++ G++ A G +EL++R + I E
Sbjct: 172 -EEARDNGQSVLLSSHILSEVERVADVVAVLQGGRLAASGPTQELRRRAAQRFHITFAE 229
>pir||G83159 probable ATP-binding component of ABC transporter PA3891 [imported]
- Pseudomonas aeruginosa (strain PAO1)
>gi|9950072|gb|AAG07278.1|AE004806_5 (AE004806) probable
ATP-binding component of ABC transporter [Pseudomonas
aeruginosa]
Length = 387
Score = 133 bits (332), Expect = 2e-30
Identities = 77/228 (33%), Positives = 126/228 (54%), Gaps = 4/228 (1%)
Query: 3 ILEVKSVTKKFPTPKG-EVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDS 61
++E+ ++K F G E AV++VS + GE+ LGP+G GKTTTL+MI I P S
Sbjct: 1 MIELDKLSKTFTQKNGKEFRAVDSVSLTVEKGEICVFLGPSGCGKTTTLKMINRIIPPTS 60
Query: 62 GEVLVDGIDAVK-NPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCE 120
G VL+DG D + + +R+ I Y+ Q+ L P +++ + I+ R G+ K K+
Sbjct: 61 GRVLIDGQDTADLDEVTLRRHIGYVIQQIGLFPNMTIEENIMVVPRLLGWDKARCKEKAR 120
Query: 121 DILELFGL--KTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTW 178
+++ + L K + + P +LS G ++RV + AL++D PL+ +DEP VDP ++
Sbjct: 121 ELMSMVKLEPKQYLQRYPRELSGGQQQRVGVIRALAADAPLLLMDEPFGAVDPINRESIQ 180
Query: 179 ELIKEKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKEL 226
E G+TVI+ SHD+ E L D+V + G+++ P L
Sbjct: 181 NEFFEMQRKLGMTVIMVSHDIDEAIKLGDKVAVFKSGRLLQYDHPDTL 228
>sp|P41234|ABC2_MOUSE ATP-BINDING CASSETTE TRANSPORTER 2 >gi|1082239|pir||B54774 ATP
binding cassette transporter ABC2 - mouse (fragment)
>gi|495259|emb|CAA53531.1| (X75927) abc2 [Mus musculus]
Length = 1472
Score = 132 bits (330), Expect = 4e-30
Identities = 75/233 (32%), Positives = 125/233 (53%), Gaps = 4/233 (1%)
Query: 6 VKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSGEVL 65
V +TK + K +A+N +S + +V+ LG NGAGKTTT+ ++ ++ P SG
Sbjct: 29 VDKLTKVYKNDKK--LALNKLSLNLYENQVVSFLGHNGAGKTTTMSILTGLFPPTSGSAT 86
Query: 66 VDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCEDILEL 125
+ G D E+RK + Q L L+V +++ +Y R + ++ + +K + ++E
Sbjct: 87 IYGHDIRTEMDEIRKNLGMCPQHNVLFDRLTVEEHLWFYSRLKSMAQEEIRKETDKMIED 146
Query: 126 FGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIKEKL 185
L H LS G+KR++ +A A + LDEPTAGVDP ++R W+LI +
Sbjct: 147 LELSNKRHSLVQTLSGGMKRKLSVAIAFVGGSRAIILDEPTAGVDPYARRAIWDLILK-- 204
Query: 186 EDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFGKTVRIVL 238
G T++L++H + E + L DR+ I++ GK+ GSP LK + R+ L
Sbjct: 205 YKPGRTILLSTHHMDEADLLGDRIAIISHGKLKCCGSPLFLKGAYXDGYRLTL 257
Score = 130 bits (324), Expect = 2e-29
Identities = 93/320 (29%), Positives = 164/320 (51%), Gaps = 12/320 (3%)
Query: 3 ILEVKSVTKKFPTPK-GEVIAVNNVSFSAN-SGEVLGILGPNGAGKTTTLRMIATIYRPD 60
+++++++TK + + K G ++AV+ + GE G+LG NGAGKT+T +M+
Sbjct: 1087 MVKIENLTKVYKSRKIGRILAVDRLCLGVCVPGECFGLLGVNGAGKTSTFKMLTGDESTT 1146
Query: 61 SGEVLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCE 120
GE V+G +K+ L+V++ + Y Q L+ R+++ Y R R +D + +
Sbjct: 1147 GGEAFVNGHSVLKDLLQVQQSLGYCPQFDVPVDELTAREHLQLYTRLRCIPWKDEAQVVK 1206
Query: 121 DILELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWEL 180
LE L +A K S G KR++ A AL +FLDEPT G+DP+++R W L
Sbjct: 1207 WALEKLELTKYADKPAGTYSGGNKRKLSTAIALIGYPAFIFLDEPTTGMDPKARRFLWNL 1266
Query: 181 IKEKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFGKTVRIVLEE 240
I + ++ G +V+LTSH + E E L R+ IM G++ GS + LK RFG I +
Sbjct: 1267 ILDLIK-TGRSVVLTSHSMEECEALCTRLAIMVNGRLHCLGSIQHLKNRFGDGYMITVR- 1324
Query: 241 PIKNFELLKEEL-LRVKNVKDVRLARDDSFDVYFKSLDDSINGILQVISPQE-----LKI 294
K+ + +K+ + +N + + V ++ + I+ + QV S E L I
Sbjct: 1325 -TKSSQNVKDVVRFFNRNFPEAHAQGKTPYKVQYQLKSEHIS-LAQVFSKMEQVVGVLGI 1382
Query: 295 KDIFTATANFEDVYLEIIER 314
+D + ++V++ ++
Sbjct: 1383 EDYSVSQTTLDNVFVNFAKK 1402
>gb|AAA62693.1| (M57689) sporulation protein [Bacillus subtilis]
>gi|2633501|emb|CAB13004.1| (Z99110) oligopeptide ABC
transporter (ATP-binding protein) [Bacillus subtilis]
Length = 305
Score = 132 bits (330), Expect = 4e-30
Identities = 80/234 (34%), Positives = 132/234 (56%), Gaps = 10/234 (4%)
Query: 3 ILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSG 62
+LE+K + + F TP+G V AV+++SF GE LG++G +G GK+TT R I +Y G
Sbjct: 5 LLEIKHLKQHFVTPRGTVKAVDDLSFDIYKGETLGLVGESGCGKSTTGRSIIRLYEATDG 64
Query: 63 EVL-----VDGIDAVKNPLEVRKRIAYMTQEP--DLTPPLSVRDYIIYYFRFRGFSK--R 113
EVL V G + K LE +++ + Q+P L P ++V D I +K +
Sbjct: 65 EVLFNGENVHGRKSRKKLLEFNRKMQMIFQDPYASLNPRMTVADIIAEGLDIHKLAKTKK 124
Query: 114 DAKKHCEDILELFGL-KTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPR 172
+ + ++LE GL K HA++ P + S G ++R+ +A AL+ D + DEP + +D
Sbjct: 125 ERMQRVHELLETVGLNKEHANRYPHEFSGGQRQRIGIARALAVDPEFIIADEPISALDVS 184
Query: 173 SKRKTWELIKEKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKEL 226
+ + L+KE ++KG+T + +HDL V+Y++DR+ +M GK+V EL
Sbjct: 185 IQAQVVNLMKELQKEKGLTYLFIAHDLSMVKYISDRIGVMYFGKLVELAPADEL 238
>emb|CAA39791.1| (X56347) OppF [Bacillus subtilis]
Length = 307
Score = 132 bits (330), Expect = 4e-30
Identities = 80/234 (34%), Positives = 132/234 (56%), Gaps = 10/234 (4%)
Query: 3 ILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSG 62
+LE+K + + F TP+G V AV+++SF GE LG++G +G GK+TT R I +Y G
Sbjct: 8 LLEIKHLKQHFVTPRGTVKAVDDLSFDIYKGETLGLVGESGCGKSTTGRSIIRLYEATDG 67
Query: 63 EVL-----VDGIDAVKNPLEVRKRIAYMTQEP--DLTPPLSVRDYIIYYFRFRGFSK--R 113
EVL V G + K LE +++ + Q+P L P ++V D I +K +
Sbjct: 68 EVLFNGENVHGRKSRKKLLEFNRKMQMIFQDPYASLNPRMTVADIIAEGLDIHKLAKTKK 127
Query: 114 DAKKHCEDILELFGL-KTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPR 172
+ + ++LE GL K HA++ P + S G ++R+ +A AL+ D + DEP + +D
Sbjct: 128 ERMQRVHELLETVGLNKEHANRYPHEFSGGQRQRIGIARALAVDPEFIIADEPISALDVS 187
Query: 173 SKRKTWELIKEKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKEL 226
+ + L+KE ++KG+T + +HDL V+Y++DR+ +M GK+V EL
Sbjct: 188 IQAQVVNLMKELQKEKGLTYLFIAHDLSMVKYISDRIGVMYFGKLVELAPADEL 241
>gb|AAK41504.1| ABC transporter, ATP binding protein [Sulfolobus solfataricus]
Length = 286
Score = 132 bits (329), Expect = 5e-30
Identities = 99/301 (32%), Positives = 159/301 (51%), Gaps = 19/301 (6%)
Query: 4 LEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSGE 63
+EV+ + KKF + + VSF SG + G +GPNGAGKTTT+++++ + R D G
Sbjct: 3 IEVEDLRKKFAGKE----VLKGVSFKLRSGSITGFIGPNGAGKTTTIKILSGLLRKDGGF 58
Query: 64 VLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCEDIL 123
V V G D NP +V +RI+ + +V +Y++ G KR+ + ++
Sbjct: 59 VKVFGEDPWDNP-KVMERISVIFTNLIHPQENTVGEYLMDLGNVYG-KKREIINY---LI 113
Query: 124 ELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIKE 183
E F L H +K+ +QLS+GL +RVQL AL DV L+ DEPTA +DP + + +E++KE
Sbjct: 114 EEFKLTPHLNKRLYQLSSGLAQRVQLVAALIKDVELIIADEPTANLDPSFRIEFYEVVKE 173
Query: 184 KLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEG-SPKELKKRFGKTVRIVLEEPI 242
GVT ++SH L E+E + VI +N G+I G K L + + +++++
Sbjct: 174 LNRKNGVTFFISSHILSELEKVITDVIFINDGRITYSGRMNKALSDTEEEEIYVMVDDTD 233
Query: 243 KNFELLKEELLRVKNVKDVRLARDDSFDVYFKSLDDSINGILQVISPQELKIKDIFTATA 302
+ +LL +L +K R+ LDD NGI ++IS + + D F +
Sbjct: 234 RALKLL-GGILEGPYIKVKGKLRE-----IVDKLDD--NGI-EIISIRRFSLDDAFKKFS 284
Query: 303 N 303
N
Sbjct: 285 N 285
>pir||D70020 ABC transporter (ATP-binding protein) homolog yusC - Bacillus
subtilis >gi|2635771|emb|CAB15264.1| (Z99120) similar to
ABC transporter (ATP-binding protein) [Bacillus
subtilis]
Length = 341
Score = 132 bits (329), Expect = 5e-30
Identities = 87/273 (31%), Positives = 153/273 (55%), Gaps = 16/273 (5%)
Query: 3 ILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSG 62
++ ++ V+K + + G+V AV NVS S GE+ GI+G +GAGK++ +R++ + +P SG
Sbjct: 1 MINLQDVSKVYKSKHGDVNAVQNVSLSIKKGEIFGIIGYSGAGKSSLIRLLNGLEKPTSG 60
Query: 63 EVLVDG--IDAV--KNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKH 118
V V G I+ V + + R I+ + Q +L +VRD I++ G K + K
Sbjct: 61 TVEVAGTKINEVNGRGLRKARHEISMIFQHFNLLWSRTVRDNIMFPLEIAGVKKSERIKR 120
Query: 119 CEDILELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTW 178
++++L GL+ P QLS G K+RV +A AL+++ ++ DE T+ +DP++
Sbjct: 121 ANELIKLVGLEGKEKSYPSQLSGGQKQRVGIARALANNPKVLLCDEATSALDPQTTDSIL 180
Query: 179 ELIKEKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEG-------SPKE-LKKRF 230
+L+ + E G+T++L +H+++ + + +RV +M GK+V EG +PKE + KRF
Sbjct: 181 DLLSDINERLGLTIVLITHEMHVIRKICNRVAVMENGKVVEEGEVLDVFKNPKEQMTKRF 240
Query: 231 GKTVRIVLEEPIKNFELLKEELLRVKNVKDVRL 263
+ V EP + E L+ L + K V+L
Sbjct: 241 VQQV----TEPEETKETLQHLLDDTASGKMVQL 269
>sp|P31220|YHBG_ECOLI PROBABLE ABC TRANSPORTER ATP-BINDING PROTEIN IN MURA-RPON
INTERGENIC REGION (ORF1) (ORF241)
>gi|2126052|pir||I60351 rpoN protein - Escherichia coli
>gi|285780|dbj|BAA02314.1| (D12938) ORF1 [Escherichia
coli] >gi|551337|gb|AAB60162.1| (U12684) orf241
[Escherichia coli]
Length = 241
Score = 131 bits (326), Expect = 1e-29
Identities = 82/229 (35%), Positives = 127/229 (54%), Gaps = 8/229 (3%)
Query: 1 MPILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPD 60
M L K++ K + KG + V +VS + NSGE++G+LGPNGAGKTTT M+ I
Sbjct: 1 MATLTAKNLAKAY---KGRRV-VEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPAR 56
Query: 61 SGEVLVDGIDAVKNPLEVRKR--IAYMTQEPDLTPPLSVRDYIIYYFRFR-GFSKRDAKK 117
G +++D D PL R R I Y+ QE + LSV D ++ + R S +
Sbjct: 57 CGNIIIDDDDISLLPLHARARRGIGYLPQEASIFRRLSVYDNLMAVLQIRDDLSAEQRED 116
Query: 118 HCEDILELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKT 177
+++E F ++ LS G +RRV++A AL+++ + LDEP AGVDP S
Sbjct: 117 RANELMEEFHIEHLRDSMGQSLSGGERRRVEIARALAANPKFILLDEPFAGVDPISVIDI 176
Query: 178 WELIKEKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKEL 226
+I E L D G+ V++T H++ E + +R I++QG ++A G+P E+
Sbjct: 177 KRII-EHLRDSGLGVLITDHNVRETLAVCERAYIVSQGHLIAHGTPTEI 224
>pir||A70082 ABC transporter (ATP-binding protein) homolog yxlF - Bacillus
subtilis >gi|1783260|dbj|BAA11737.1| (D83026) homologous
to many ATP-binding transport proteins; hypothetical
[Bacillus subtilis] >gi|2636401|emb|CAB15892.1| (Z99123)
similar to ABC transporter (ATP-binding protein)
[Bacillus subtilis]
Length = 295
Score = 131 bits (326), Expect = 1e-29
Identities = 96/320 (30%), Positives = 162/320 (50%), Gaps = 37/320 (11%)
Query: 3 ILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSG 62
+L ++S+ K + + AV NVSF N E + +LGPNGAGKTTTL+M+A + P SG
Sbjct: 1 MLSIESLCKSYRHHE----AVKNVSFHVNENECVALLGPNGAGKTTTLQMLAGLLSPTSG 56
Query: 63 EVLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCEDI 122
+ + G + R+ I Y+ Q P ++ +++ + R G SKR ++ ++
Sbjct: 57 TIKLLGEKKLD-----RRLIGYLPQYPAFYSWMTANEFLTFAGRLSGLSKRKCQEKIGEM 111
Query: 123 LELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIK 182
LE GL AHK+ S G+K+R+ LA AL + LDEP + +DP + + ++++
Sbjct: 112 LEFVGLHEAAHKRIGGYSGGMKQRLGLAQALLHKPKFLILDEPVSALDPTGRFEVLDMMR 171
Query: 183 EKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKR-----FGKTVRIV 237
E K + V+ ++H L++ E + D+V+IM G+I +G +ELK++ F +V+
Sbjct: 172 EL--KKHMAVLFSTHVLHDAEQVCDQVVIMKNGEISWKGELQELKQQQQTNVFTLSVKEK 229
Query: 238 L-----EEPIKNFELLKEELLRVKNVKDVRLARDDSFDVYFKSLDDSINGILQVISPQEL 292
L E+P + + K V + D+ R L D I L V ++
Sbjct: 230 LEGWLEEKPYVSAIVYKNPSQAVFELPDIHAGR--------SLLSDCIRKGLTVTRFEQ- 280
Query: 293 KIKDIFTATANFEDVYLEII 312
T + EDVYL+++
Sbjct: 281 -------KTESLEDVYLKVV 293
>gi|11498623 ABC transporter, ATP-binding protein [Archaeoglobus fulgidus]
>gi|7445942|pir||B69377 ABC transporter, ATP-binding
protein homolog - Archaeoglobus fulgidus
>gi|2649576|gb|AAB90224.1| (AE001033) ABC transporter,
ATP-binding protein [Archaeoglobus fulgidus]
Length = 228
Score = 131 bits (326), Expect = 1e-29
Identities = 75/222 (33%), Positives = 133/222 (59%), Gaps = 6/222 (2%)
Query: 1 MPILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPD 60
M ++E+++V K + T EV A++ VS GE + I+GP+G+GK+T L +I + +P
Sbjct: 1 MKVVELRNVYKIYRTEYYEVRALDGVSMDVEEGEFVVIMGPSGSGKSTLLNLIGCLDKPT 60
Query: 61 SGEVLVDGIDAVK---NPLEVRKR--IAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDA 115
GEVL++G++ N L +R I ++ Q +L P L+ + + F+G +R+
Sbjct: 61 EGEVLINGVETSSLNDNRLTELRRDTIGFIFQTYNLIPTLTALENVELPMIFKGVGRRER 120
Query: 116 KKHCEDILELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKR 175
++ +++L+ GL+ ++KP ++S G ++RV +A AL+++ ++ DEPT +D +S
Sbjct: 121 EERAKELLKNVGLEKEMNRKPNEMSGGQQQRVAIARALANNPKILLCDEPTGNLDTKSGE 180
Query: 176 KTWELIKEKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKI 217
+ E+I+ + E GVTVIL +HD +Y DRVI + GKI
Sbjct: 181 QVMEIIRHQNEVLGVTVILVTHDPSLAKY-GDRVIRLRDGKI 221
>pir||E72384 ABC transporter, ATP-binding protein - Thermotoga maritima (strain
MSB8) >gi|4980892|gb|AAD35474.1|AE001718_11 (AE001718)
ABC transporter, ATP-binding protein [Thermotoga
maritima]
Length = 301
Score = 131 bits (326), Expect = 1e-29
Identities = 93/292 (31%), Positives = 152/292 (51%), Gaps = 28/292 (9%)
Query: 1 MPILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPD 60
+ IL+V + K + G+V AV+ +SF+ G V LGPNGAGKTTT+ ++ + + D
Sbjct: 12 LEILKVVDLKKHY----GDVKAVDGISFTVERGTVFSFLGPNGAGKTTTVEILEGLRKKD 67
Query: 61 SGEVLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCE 120
SGE+ G E +++I Q+ L+V + + FRG +
Sbjct: 68 SGEIYYFGERKDVLDRETKRKIGVCLQKSAFFENLTVWETLKL---FRGL--YGTGLDLK 122
Query: 121 DILELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWEL 180
+++ LF L+ K LS G +R+ +A A +D +VFLDEPT G+DP+++R+ W+
Sbjct: 123 EVMGLFSLENIEKKMVKTLSGGQLQRLAVAVAFINDPEIVFLDEPTTGLDPQARRQIWDT 182
Query: 181 IKEKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFG--------- 231
I E ++ G T+ LT+H + E E L+D V I++ GKI+AEG+P L G
Sbjct: 183 I-EHFKNLGKTIFLTTHYMEEAERLSDHVCIIDHGKIIAEGTPSSLISSSGLKTVVEFDC 241
Query: 232 -KTVRIVLEEPIKNF--------ELLKEELLRVKNVKDVRLARDDSFDVYFK 274
+ V + E +N E L ++LL+ NV ++ + + + DV+ K
Sbjct: 242 DQDVNVRYLEKKENHYVVETDAPEELIKDLLKNWNVSNIVIRKPNLEDVFLK 293
>pir||B83294 probable ATP-binding component of ABC transporter PA2812 [imported]
- Pseudomonas aeruginosa (strain PAO1)
>gi|9948896|gb|AAG06200.1|AE004708_6 (AE004708) probable
ATP-binding component of ABC transporter [Pseudomonas
aeruginosa]
Length = 310
Score = 131 bits (326), Expect = 1e-29
Identities = 84/293 (28%), Positives = 146/293 (49%), Gaps = 9/293 (3%)
Query: 22 AVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSGEVLVDGIDAVKNPLEVRKR 81
A+ + G+ +LGPNGAGK+TT+ +++T+ SG V V G D K+P +++
Sbjct: 20 ALKGIDLDVAEGDFFALLGPNGAGKSTTIGILSTLVNKTSGSVSVFGHDLDKDPAGLKRC 79
Query: 82 IAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCEDILELFGLKTHAHKKPFQLST 141
+ + QE + V D ++ + G + AK+ E L GL ++ LS
Sbjct: 80 LGVVPQEFNFNQFEKVFDIVVTQAGYYGIPAKIAKERAERYLTQLGLWDKRNEASRMLSG 139
Query: 142 GLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIKEKLEDKGVTVILTSHDLYE 201
G+KRR+ +A AL L+ LDEPTAGVD +R W + E L +G+++ILT+H L E
Sbjct: 140 GMKRRLMIARALVHQPRLLILDEPTAGVDIELRRSMWSFLTE-LNQEGISIILTTHYLEE 198
Query: 202 VEYLADRVIIMNQGKIVAEGSPKELKKRFGKTVRIVLEEPIKNFELLKEELLRVKNVKDV 261
E L + I++ G+IV S ++L ++ +KN + L L +
Sbjct: 199 AEQLCRNIAIIDHGEIVQNTSMRDLLMTLHSETFLL---DLKNVQALPPTL----DGYPT 251
Query: 262 RLARDDSFDVYFKSLDDSINGILQVISPQELKIKDIFTATANFEDVYLEIIER 314
RL D + +V + IN + + Q +++ + T E++++ ++E+
Sbjct: 252 RLVDDHTLEVQVEK-SQGINDLFAQLGAQGIEVLSLRNKTNRLEELFVSLVEK 303
>dbj|BAB10074.1| (AB010069) contains similarity to ABC transporter~gene_id:MAC9.5
[Arabidopsis thaliana]
Length = 907
Score = 131 bits (326), Expect = 1e-29
Identities = 91/316 (28%), Positives = 160/316 (49%), Gaps = 20/316 (6%)
Query: 8 SVTKKFPTPKGEV--IAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSGEVL 65
++ K +P G +AV + SGE G+LGPNGAGKT+ + M+ + +P SG L
Sbjct: 589 NLKKVYPGSDGNPPKLAVRGLYLDVPSGECFGMLGPNGAGKTSFINMMTGLLKPTSGTAL 648
Query: 66 VDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCEDILEL 125
V G+D K+ +V + Q L L+ R+++++Y R + + E+ L+
Sbjct: 649 VQGLDICKDMNKVYTSMGVCPQHDLLWGTLTGREHLLFYGRLKNIKGSALMQAVEESLKS 708
Query: 126 FGLKTH--AHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIKE 183
L A K + S G+KRR+ +A +L + +V++DEP+ G+DP S++ W +I+
Sbjct: 709 VSLFDGGVADKPAGKYSGGMKRRLSVAISLIGNPKVVYMDEPSTGLDPASRKDLWTVIQR 768
Query: 184 KLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFGKTVRIVLEEPIK 243
++ +ILT+H + E E+L DR+ I G + G+PKELK R+G + + ++
Sbjct: 769 AKQN--TAIILTTHSMEEAEFLCDRLGIFVDGGLQCVGNPKELKGRYGGSYVFTMTTSVE 826
Query: 244 NFELLKEELLRVK-NVKDV-RLARDDSFDVYFKSLDDSINGILQVISPQELKIKDIFT-- 299
+ E ++ + + N K V LA F++ + I + ++ K+K FT
Sbjct: 827 HEEKVERMVKHISPNSKRVYHLAGTQKFEI--PKQEVMIADVFFMVE----KVKSKFTVF 880
Query: 300 ----ATANFEDVYLEI 311
A EDV+ ++
Sbjct: 881 AWGLADTTLEDVFFKV 896
>gb|AAG19180.1| (AE005015) ABC transporter, ATP-binding protein; Trp5
[Halobacterium sp. NRC-1]
Length = 287
Score = 131 bits (326), Expect = 1e-29
Identities = 91/312 (29%), Positives = 156/312 (49%), Gaps = 31/312 (9%)
Query: 3 ILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSG 62
++ V+ + K++ G V AV+ VSF +GEV G++GPNGAGKT+TL+M+ + P +G
Sbjct: 1 MISVQRLEKRY----GGVTAVDGVSFDVGAGEVFGLVGPNGAGKTSTLKMLCGLVEPSAG 56
Query: 63 EVLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCEDI 122
++ V+G DA +R+ + ++ +E L ++ R Y+ ++ + A + E
Sbjct: 57 DITVNGFDA--GDTAMRRTLGFLPEESPLYDEMTPRSYLRFFADLYDVDRATANERIEAA 114
Query: 123 LELFGLKTHAHKKPF-QLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELI 181
L+ L A +P S G+ R+V +A +L +D ++ DEP +G+DP + E
Sbjct: 115 LDRLDL--DARDRPVGDFSKGMTRKVAIARSLVNDPDVLVYDEPASGLDPLTTNTVIEFT 172
Query: 182 KEKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFGKTVRIVLEEP 241
+E D G T++ ++HDL+ VE + DRV IM G+ A G+ +++ G
Sbjct: 173 RELAAD-GKTIVFSAHDLHHVESVCDRVAIMRDGQFAATGTLADIRDEHG---------- 221
Query: 242 IKNFELLKEELLRVKNVKDVRLARDDSFDVYFKSLDD--SINGILQVISPQELKIKDIFT 299
E RV DV AR S Y ++D ++ I + + DI T
Sbjct: 222 --------EVSYRVFTDVDVDDAR-PSNGRYVTTVDSMADVDAIRAAAADAGGGVVDIRT 272
Query: 300 ATANFEDVYLEI 311
+ EDV+L++
Sbjct: 273 DESTLEDVFLDV 284
>sp|P45073|YHBG_HAEIN PROBABLE ABC TRANSPORTER ATP-BINDING PROTEIN HI1148
>gi|1074660|pir||I64167 hypothetical protein HI1148 -
Haemophilus influenzae (strain Rd KW20)
>gi|1574704|gb|AAC22803.1| (U32794) ABC transporter,
ATP-binding protein [Haemophilus influenzae Rd]
Length = 241
Score = 131 bits (325), Expect = 1e-29
Identities = 75/229 (32%), Positives = 134/229 (57%), Gaps = 8/229 (3%)
Query: 1 MPILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPD 60
M IL +++ K + + K V++VS + NS E++G+LGPNGAGKTTT M+ + R D
Sbjct: 1 MSILTAENLAKSYKSRK----VVSDVSLTVNSNEIVGLLGPNGAGKTTTFYMVVGLVRQD 56
Query: 61 SGEVLVDGIDAVKNPLEVR--KRIAYMTQEPDLTPPLSVRDYIIYYFRFR-GFSKRDAKK 117
G++++DG D P+ R + I Y+ QE + L+V + ++ R + + ++
Sbjct: 57 QGKIVIDGEDISLLPMHNRAQRGIGYLPQEASIFRRLTVYENLMAVLEIRKDLTPQQRRE 116
Query: 118 HCEDILELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKT 177
++++E F + LS G +RRV++A AL+++ + LDEP AGVDP S
Sbjct: 117 KADELIEEFNISHIRDNLGQALSGGERRRVEIARALAANPKFILLDEPFAGVDPISVSDI 176
Query: 178 WELIKEKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKEL 226
++I + L ++G+ V++T H++ E + +R I+ GKI+A G+P+++
Sbjct: 177 KKIITD-LRNRGLGVLITDHNVRETLDVCERAYIVGAGKIIATGTPEQV 224
>pir||T09008 cdd4-like protein ScnF - Streptococcus pyogenes
>gi|2502072|gb|AAB92604.1| (AF026542) ScnF
[Streptococcus pyogenes]
Length = 299
Score = 131 bits (325), Expect = 1e-29
Identities = 90/308 (29%), Positives = 159/308 (51%), Gaps = 20/308 (6%)
Query: 4 LEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSGE 63
+E++ ++K + ++ V+ + GE+ G LGPNGAGKTTT++MI ++ P GE
Sbjct: 5 IELRKLSKVYQ----DITTVDLEKITVREGEIYGFLGPNGAGKTTTMKMILSLVSPTLGE 60
Query: 64 VLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCEDIL 123
+L++G D N +R I M +EP P L+ + ++ + + GF + + L
Sbjct: 61 ILINGEDIKGNHAYLRV-IGSMIEEPSYYPNLTGYENLLVFQKMVGFDE----SNIWPTL 115
Query: 124 ELFGLKTHAHKKPF--QLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELI 181
L GL ++K S G+K+R+ LA AL ++ LDEPT G+DP + ELI
Sbjct: 116 ALVGLAEENNRKKLVKAYSLGMKQRLALAFALVKKPKILLLDEPTNGLDPAGIHEIRELI 175
Query: 182 KEKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFGKTVRIVLEEP 241
+ ++KG+TV ++S L E+E++ADRV I+N G++V EG + +K I +
Sbjct: 176 VKLAKEKGLTVFISSQILSEIEHIADRVGIINHGRLVYEGEIEAIK----SNTWIEIGGD 231
Query: 242 IKNFELLKEELLRVKNVKDVRLARDDSFDVYFKSLD-DSINGILQVISPQELKIKDIFTA 300
+++ + N V + + V FK++D D + + + + +I +
Sbjct: 232 FSQNNIVQSLI----NYGQVEVLGASASHVKFKNIDNDKLADVGTYLIENDYRIFRVVRE 287
Query: 301 TANFEDVY 308
+ N ED++
Sbjct: 288 SENLEDIF 295
>pir||E72314 ribose ABC transporter, ATP-binding protein - Thermotoga maritima
(strain MSB8) >gi|4981493|gb|AAD36035.1|AE001758_13
(AE001758) ribose ABC transporter, ATP-binding protein
[Thermotoga maritima]
Length = 523
Score = 131 bits (325), Expect = 1e-29
Identities = 89/268 (33%), Positives = 147/268 (54%), Gaps = 18/268 (6%)
Query: 3 ILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSG 62
+LE +++TK FP VIAVNNV+ GEV ++G NGAGK+T ++++A +Y G
Sbjct: 12 LLEARNITKTFPG----VIAVNNVTLQIYKGEVCALVGENGAGKSTLMKILAGVYPDYEG 67
Query: 63 EVLVDGIDA-VKNPLEVRKR-IAYMTQEPDLTPPLSVRDYIIYYFR-FRGFSKRDAKKHC 119
++ ++G + +NP E ++ IA + QE DL P LS + I F + +K
Sbjct: 68 QIFLEGKEVRFRNPREAQENGIALIPQELDLVPNLSSAENIFLSREPVNEFGVIEYQKMF 127
Query: 120 EDILELF---GLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRK 176
E +LF G+ K LST ++ V +A ALS D ++ +DEPT+ + R +
Sbjct: 128 EQASKLFSKLGVNIDPKTKVEDLSTSQQQMVAIAKALSLDAKIIIMDEPTSAIGKRETEQ 187
Query: 177 TWELIKEKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFGKTVRI 236
+ +I+ L+++G +VI SH L E+ +ADRV++M G+ V EG +E K VR+
Sbjct: 188 LFNIIR-SLKNEGKSVIYISHRLEEIFEIADRVVVMRDGRKVGEGPIEEFD--HDKLVRL 244
Query: 237 VLEEPIKNFEL-----LKEELLRVKNVK 259
++ I F + + +E+ RV+ +K
Sbjct: 245 MVGRSIDQFFIKERATITDEIFRVEGIK 272
Score = 80.0 bits (194), Expect = 3e-14
Identities = 70/220 (31%), Positives = 114/220 (51%), Gaps = 26/220 (11%)
Query: 21 IAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDS-GEVLVDGI--------DA 71
+ V++VSF GEVLGI G GAG+T L I + + G+V + G DA
Sbjct: 281 LLVDDVSFYVRKGEVLGIYGLVGAGRTELLEAIFGAHPGRTEGKVFIGGKEIKIHSPRDA 340
Query: 72 VKNPL----EVRKR---IAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCEDILE 124
VKN + E RK I M+ ++T P V I+ F + K+ +E
Sbjct: 341 VKNGIGLVPEDRKTAGLILQMSVLHNITLPSVVMKLIVRKFGL--IDSQLEKEIVRSFIE 398
Query: 125 LFGLKTHAHKKPFQ----LSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWEL 180
+KT + P+Q LS G +++V LA L+ ++ LDEPT G+D +K + ++L
Sbjct: 399 KLNIKTPS---PYQIVENLSGGNQQKVVLAKWLAIKPKVLLLDEPTRGIDVNAKSEIYKL 455
Query: 181 IKEKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAE 220
I E + G+ V++ S +L E+ ++DR+++M++G+ AE
Sbjct: 456 ISE-MAVSGMGVVMVSSELPEILAMSDRILVMSEGRKTAE 494
>emb|CAB60255.1| (AJ250862) MrsF protein [Bacillus sp. HIL-Y85/54728]
Length = 303
Score = 131 bits (325), Expect = 1e-29
Identities = 87/309 (28%), Positives = 164/309 (52%), Gaps = 17/309 (5%)
Query: 3 ILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSG 62
I+ +TKK+ + +V+ ++ GE+ G LGPNGAGKTTT+RM+ + +P G
Sbjct: 5 IVVTHDLTKKYK----KHTSVDGLNLRIRRGEIYGFLGPNGAGKTTTIRMLLGLIKPTKG 60
Query: 63 EVLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCEDI 122
+ + G + KN L++ +RI + + P L+ + + R RG ++ ++
Sbjct: 61 NIEIFGQNLNKNRLQILQRIGSLVESPTYYGNLTGYENLEAVRRLRGLPEQQV----NEV 116
Query: 123 LELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIK 182
LE L A++ + S G+K+R+ +A AL S L+ LDEPT G+DP ++ ELIK
Sbjct: 117 LETVRLSKVANRLTKEYSLGMKQRLGIAVALLSSPDLLILDEPTNGLDPSGIQEIRELIK 176
Query: 183 EKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFGKTVRIVLEEPI 242
E L G++VI++SH L E++ +A +V I+N GK++ + S L ++ +++ + + I
Sbjct: 177 E-LPKSGMSVIVSSHLLSEIDQMATQVGIINNGKMIFQDSIASLHQKRKPLLKVGVSDVI 235
Query: 243 KNFELLKEELLRVKNVKDVRLARDDSFDVYFKSLDDSINGILQVISPQELKIKDIFTATA 302
E + N K +++ ++ ++ + ++ I ++ L + + T
Sbjct: 236 --------EAKTILNRKGLKVDLQKNYLWLSQTEPEFVSEINSILLHSGLSVFRLEEKTR 287
Query: 303 NFEDVYLEI 311
+ ED++LE+
Sbjct: 288 SLEDIFLEL 296
>sp|P31134|POTG_ECOLI PUTRESCINE TRANSPORT ATP-BINDING PROTEIN POTG
>gi|321862|pir||B45313 putrescine transport protein potG
- Escherichia coli >gi|147335|gb|AAA24410.1| (M93239)
nucleotide binding protein [Escherichia coli]
>gi|1651388|dbj|BAA35566.1| (D90723) Putrescine
transport protein PotG. [Escherichia coli]
>gi|1787079|gb|AAC73942.1| (AE000187) ATP-binding
component of putrescine transport system [Escherichia
coli K12]
Length = 404
Score = 130 bits (324), Expect = 2e-29
Identities = 75/225 (33%), Positives = 127/225 (56%), Gaps = 5/225 (2%)
Query: 2 PILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDS 61
P+LE++++TK + AV++VS + GE+ +LG +G GK+T LRM+A +P +
Sbjct: 45 PLLEIRNLTKSYDGQH----AVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQPSA 100
Query: 62 GEVLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCED 121
G++++DG+D + P +R I M Q L P ++V I + + K + +
Sbjct: 101 GQIMLDGVDLSQVPPYLRP-INMMFQSYALFPHMTVEQNIAFGLKQDKLPKAEIASRVNE 159
Query: 122 ILELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELI 181
+L L ++ A +KP QLS G ++RV LA +L+ L+ LDEP +D + + + +
Sbjct: 160 MLGLVHMQEFAKRKPHQLSGGQRQRVALARSLAKRPKLLLLDEPMGALDKKLRDRMQLEV 219
Query: 182 KEKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKEL 226
+ LE GVT ++ +HD E +A R+ IMN+GK V G P+E+
Sbjct: 220 VDILERVGVTCVMVTHDQEEAMTMAGRIAIMNRGKFVQIGEPEEI 264
>pir||H71006 probable ATP-binding transport protein - Pyrococcus horikoshii
>gi|3257773|dbj|BAA30456.1| (AP000006) 330aa long
hypothetical ATP-binding transport protein [Pyrococcus
horikoshii]
Length = 330
Score = 130 bits (323), Expect = 2e-29
Identities = 78/226 (34%), Positives = 125/226 (54%), Gaps = 7/226 (3%)
Query: 1 MPILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPD 60
M +E++ + K+F GE VS S GE+L +LGP+G GKTTTLR+IA + +PD
Sbjct: 1 MVSIELRDIIKRF----GEFEL--KVSLSVKDGELLTLLGPSGCGKTTTLRIIAGLEKPD 54
Query: 61 SGEVLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCE 120
G V DG D P + I + Q+ L P ++V + + R + + +K
Sbjct: 55 KGRVYFDGRDITDLP-PYERNIGLVFQDYALFPHMTVFKNVAFGLEVRRVPRMEIEKRVR 113
Query: 121 DILELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWEL 180
++L+L GL+ ++ P +LS G ++RV LA AL + ++ LDEP + +D + + K
Sbjct: 114 EVLDLVGLRGFENRLPEELSGGQQQRVALARALVIEPDVLLLDEPLSNLDAKVREKLRGE 173
Query: 181 IKEKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKEL 226
IK +++ G+T I +HD E L+DR+ +MN G+I G P +L
Sbjct: 174 IKRIVKELGITTIYVTHDQEEAMVLSDRIAVMNFGRIEQVGEPYDL 219
>gi|11498611 ABC transporter, ATP-binding protein [Archaeoglobus fulgidus]
>gi|7445743|pir||F69375 ABC transporter, ATP-binding
protein homolog - Archaeoglobus fulgidus
>gi|2649585|gb|AAB90232.1| (AE001034) ABC transporter,
ATP-binding protein [Archaeoglobus fulgidus]
Length = 285
Score = 129 bits (322), Expect = 3e-29
Identities = 78/229 (34%), Positives = 131/229 (57%), Gaps = 21/229 (9%)
Query: 1 MPILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPD 60
M ILE+ +++ +F G+ AV ++ + GE+LG+LGPNG+GKTTT+R I + P
Sbjct: 1 MNILEISNLSVRF----GDFYAVKGLTLNVRRGEILGLLGPNGSGKTTTIRAIFGMV-PY 55
Query: 61 SGEVLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCE 120
GE+ + +M Q L LSV + + ++ G + ++ E
Sbjct: 56 EGEIR-----------NYATSVGWMPQNSPLYLNLSVEENLRFFASLYGI---EDERRVE 101
Query: 121 DILELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWEL 180
++L+L L+ + + LS G+++R LACA+ D L+ LDEPTAGVDP + WE
Sbjct: 102 EMLKLVQLERYRKRLVKNLSGGMRQRAMLACAMLHDPELLVLDEPTAGVDPPLRVSFWEQ 161
Query: 181 IKEKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKR 229
EKL ++G T+++T+H + E E +R++++ G +AEG+P+E+K+R
Sbjct: 162 F-EKLREEGKTILVTTHYMDEAE-RCERLVLIRNGSKIAEGTPEEIKRR 208
>sp|P45171|POTA_HAEIN SPERMIDINE/PUTRESCINE TRANSPORT ATP-BINDING PROTEIN POTA
>gi|1075318|pir||B64118 spermidine/putrescine transport
protein potA - Haemophilus influenzae (strain Rd KW20)
>gi|1574806|gb|AAC22991.1| (U32813)
spermidine/putrescine ABC transporter, ATP-binding
protein (potA) [Haemophilus influenzae Rd]
Length = 381
Score = 129 bits (321), Expect = 4e-29
Identities = 68/225 (30%), Positives = 129/225 (57%), Gaps = 5/225 (2%)
Query: 2 PILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDS 61
PI+E++S+ K + G +N+ + + N+GE + ILGP+G GKTT LR++A + DS
Sbjct: 18 PIIELRSIKKSY----GSNTIINDFNLTINNGEFVTILGPSGCGKTTVLRLLAGLEELDS 73
Query: 62 GEVLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCED 121
G +++DG D P E ++ I + Q L P +++ + + + R + + K +
Sbjct: 74 GSIILDGEDITNVPAE-KRHINTVFQSYALFPHMTIFENVAFGLRMQKVPNEEIKPRVLE 132
Query: 122 ILELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELI 181
L + L+ A +KP QLS G ++R+ +A A+ + ++ LDE + +D + +++ + +
Sbjct: 133 ALRMVQLEEMADRKPTQLSGGQQQRIAIARAVVNKPKVLLLDESLSALDYKLRKQMQQEL 192
Query: 182 KEKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKEL 226
K G+T I +HD E ++DR++++ +GKI +GSP+E+
Sbjct: 193 KMLQRQLGITFIFVTHDQEEAITMSDRIVLLRKGKIAQDGSPREI 237
>pir||H82440 ABC transporter, ATP-binding protein VCA0602 [imported] - Vibrio
cholerae (group O1 strain N16961)
>gi|9658013|gb|AAF96503.1| (AE004390) ABC transporter,
ATP-binding protein [Vibrio cholerae]
Length = 403
Score = 129 bits (321), Expect = 4e-29
Identities = 90/277 (32%), Positives = 141/277 (50%), Gaps = 14/277 (5%)
Query: 4 LEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSGE 63
L+++ V K+F G A+ +S S GE + LGP+G GKTT LR IA + P SG
Sbjct: 35 LDIRHVVKQF----GSFTALKEISLSIEKGEFVCFLGPSGCGKTTLLRAIAGLDLPTSGT 90
Query: 64 VLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCEDIL 123
+ + P E R + Q L P L+V + I R +G S RDA + E L
Sbjct: 91 IHQNQQAITFLPPEQRD-FGIVFQSYALFPNLTVEENIAIGLRNQGMSVRDALEKVEQWL 149
Query: 124 ELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIKE 183
E+ GL T A K P QLS G ++RV LA AL+ L+ LDEP + +D + + E I +
Sbjct: 150 EMIGLATSAQKYPSQLSGGQQQRVALARALALSPGLLLLDEPLSALDAKVRTHLREEICQ 209
Query: 184 KLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKR--------FGKTVR 235
G+T I+ +HD E +ADR+++MN G I G+P+E+ ++ F T+
Sbjct: 210 LQRKLGITTIMVTHDQEEALTMADRIVVMNHGVIEQVGTPQEIYQKPASRFVAEFVGTMN 269
Query: 236 IVLEEPIKNFEL-LKEELLRVKNVKDVRLARDDSFDV 271
+ + +L + E L+ + +++ + + FD+
Sbjct: 270 FIPVSMASSQQLRIAESLIALPKIENYTPCQGEQFDL 306
>gi|11498288 glutamine ABC transporter, ATP-binding protein (glnQ)
[Archaeoglobus fulgidus] >gi|7442524|pir||H69334
glutamine transport protein glnQ - Archaeoglobus
fulgidus >gi|2649950|gb|AAB90561.1| (AE001058) glutamine
ABC transporter, ATP-binding protein (glnQ)
[Archaeoglobus fulgidus]
Length = 242
Score = 129 bits (320), Expect = 6e-29
Identities = 76/230 (33%), Positives = 138/230 (59%), Gaps = 9/230 (3%)
Query: 1 MPILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPD 60
M LE+ + K+F GE+ + V+ GEV+ I+GP+G+GK+T LR I + P
Sbjct: 1 MAQLEIIDLHKRF----GELEVLKGVTMKVEKGEVVVIIGPSGSGKSTLLRCINRLEEPT 56
Query: 61 SGEVLVDGIDAVKNPLE---VRKRIAYMTQEPDLTPPL-SVRDYIIYYFRFRGFSKRDAK 116
SG++L+DG+D + ++ VR+RI + Q+ +L P L ++++ + + + SKR+A+
Sbjct: 57 SGKILLDGVDITNSKIDINKVRQRIGIVFQQFNLFPHLTALQNVTLAPIKIKKMSKREAE 116
Query: 117 KHCEDILELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRK 176
+ +LE GL+ A P QLS G ++RV +A AL+ + ++ DE T+ +DP ++
Sbjct: 117 ELGMRLLEKVGLEDKADYYPAQLSGGQQQRVAIARALAMNPEVMLFDEVTSALDPELVKE 176
Query: 177 TWELIKEKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKEL 226
+++K+ D G+T+++ +H++ + DRVI M+ G IV EG P+++
Sbjct: 177 VLDVMKQLARD-GMTMVVVTHEMGFAREVGDRVIFMDGGVIVEEGKPEQI 225
>pir||JC5348 cdd4 protein - Clostridium difficile >gi|1770140|emb|CAA63569.1|
(X92982) cdd4 [Clostridium difficile]
Length = 301
Score = 128 bits (319), Expect = 7e-29
Identities = 91/315 (28%), Positives = 159/315 (49%), Gaps = 31/315 (9%)
Query: 10 TKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSGEVLVDGI 69
T++ ++ V ++ G V G LGPNGAGK+TTL+M+ + +P G + + G
Sbjct: 7 TQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGK 66
Query: 70 DA-VKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCEDILELFGL 128
+ KN + + K I + + P L+ + + R K K+ + L++ L
Sbjct: 67 ELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPK----KNVNEALKIVRL 122
Query: 129 KTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIKEKLEDK 188
+ +KK Q S G+K+R+ +A A+ L+ LDEPT G+DP + ELIK E
Sbjct: 123 ENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKY 182
Query: 189 GVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFG-----KTVRIVLEEPIK 243
G+TV+++SH L E++ +A + I+N G++V + S KEL R KT +V + +
Sbjct: 183 GMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQSQIAIKTKNVVSAQKLL 242
Query: 244 N----FELLKEELLRVKNVKDVRLARDDSFDVYFKSLDDSINGILQVISPQELKIKDIFT 299
N L+++ L ++N+KD +A+ ING+L + +I++
Sbjct: 243 NTKGYMSLIQDGYLTIENLKDSDVAK--------------INGMLVHSNIDVFRIEE--- 285
Query: 300 ATANFEDVYLEIIER 314
+ ED++LE++ R
Sbjct: 286 HKKSLEDIFLELLVR 300
>gb|AAC27495.1| (AF077856) PotA [Actinobacillus actinomycetemcomitans]
Length = 372
Score = 128 bits (319), Expect = 7e-29
Identities = 68/225 (30%), Positives = 129/225 (57%), Gaps = 5/225 (2%)
Query: 2 PILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDS 61
PI+E++S+TK + G + + + + N+GE L ILGP+G GKTT LR++A + DS
Sbjct: 9 PIIELRSITKSY----GSNTIIKDFNLTINNGEFLTILGPSGCGKTTVLRLLAGLEELDS 64
Query: 62 GEVLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCED 121
G +++DG D P E ++ + + Q L P +++ + + + R + + + K +
Sbjct: 65 GNIILDGEDITNVPAE-KRHVNTVFQSYALFPHMTIFENVAFGLRMQKVPEAEIKPRVLE 123
Query: 122 ILELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELI 181
L + L+ A +KP QLS G ++R+ +A A+ + ++ LDE + +D + +++ +
Sbjct: 124 ALRMVQLEEMADRKPTQLSGGQQQRIAIARAVVNKPKVLLLDESLSALDYKLRKQMQYEL 183
Query: 182 KEKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKEL 226
K G+T I +HD E ++DR++++ +GKI +GSP+E+
Sbjct: 184 KVLQRQLGITFIFVTHDQEEAITMSDRIVLLRKGKIAQDGSPREI 228
>gi|9506365 ATP-binding cassette, sub-family A (ABC1), member 7 [Homo sapiens]
>gi|9211112|gb|AAF85794.1|AF250238_1 (AF250238)
macrophage ABC transporter [Homo sapiens]
Length = 2146
Score = 128 bits (319), Expect = 7e-29
Identities = 79/238 (33%), Positives = 127/238 (53%), Gaps = 6/238 (2%)
Query: 2 PILEVKSVTKKFP-TPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPD 60
P + V+S+ K+FP +P+ A+ +S G + LG NGAGKTTTL +++ ++ P
Sbjct: 805 PGVSVRSLEKRFPGSPQP---ALRGLSLDFYQGHITAFLGHNGAGKTTTLSILSGLFPPS 861
Query: 61 SGEVLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCE 120
G + G D + +R + Q L L+V +++ +Y R +G S +
Sbjct: 862 GGSAFILGHDVRSSMAAIRPHLGVCPQYNVLFDMLTVDEHVWFYGRLKGLSAAVVGPEQD 921
Query: 121 DILELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWEL 180
+L+ GL + + LS G++R++ +A A +V LDEPTAGVDP S+R WEL
Sbjct: 922 RLLQDVGLVSKQSVQTRHLSGGMQRKLSVAIAFVGGSQVVILDEPTAGVDPASRRGIWEL 981
Query: 181 IKEKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFGKTVRIVL 238
+ + E G T+IL++H L E E L DRV ++ G++ GSP L++ G + L
Sbjct: 982 LLKYRE--GRTLILSTHHLDEAELLGDRVAVVAGGRLCCCGSPLFLRRHLGSGYYLTL 1037
Score = 119 bits (296), Expect = 4e-26
Identities = 76/239 (31%), Positives = 118/239 (48%), Gaps = 3/239 (1%)
Query: 3 ILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSG 62
+L ++++TK + + + AV+ + GE G+LG NGAGKT+T RM+ G
Sbjct: 1792 VLVLRNLTKVYRGQR--MPAVDRLCLGIPPGECFGLLGVNGAGKTSTFRMVTGDTLASRG 1849
Query: 63 EVLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCEDI 122
E ++ G + P + Y Q + L+ R+++ R RG + +
Sbjct: 1850 EAVLAGHSVAREPSAAHLSMGYCPQSDAIFELLTGREHLELLARLRGVPEAQVAQTAGSG 1909
Query: 123 LELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIK 182
L GL +A + S G KR++ A AL D +VFLDEPT G+DP ++R W +
Sbjct: 1910 LARLGLSWYADRPAGTYSGGNKRKLATALALVGDPAVVFLDEPTTGMDPSARRFLWNSLL 1969
Query: 183 EKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFGKTVRIVLEEP 241
+ + G +V+LTSH + E E L R+ IM G+ GSP+ LK RF + L P
Sbjct: 1970 AVVRE-GRSVMLTSHSMEECEALCSRLAIMVNGRFRCLGSPQHLKGRFAAGHTLTLRVP 2027
>gi|11427664 ATP-binding cassette, sub-family A (ABC1), member 7 [Homo sapiens]
Length = 2146
Score = 128 bits (319), Expect = 7e-29
Identities = 79/238 (33%), Positives = 127/238 (53%), Gaps = 6/238 (2%)
Query: 2 PILEVKSVTKKFP-TPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPD 60
P + V+S+ K+FP +P+ A+ +S G + LG NGAGKTTTL +++ ++ P
Sbjct: 805 PGVSVRSLEKRFPGSPQP---ALRGLSLDFYQGHITAFLGHNGAGKTTTLSILSGLFPPS 861
Query: 61 SGEVLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCE 120
G + G D + +R + Q L L+V +++ +Y R +G S +
Sbjct: 862 GGSAFILGHDVRSSMAAIRPHLGVCPQYNVLFDMLTVDEHVWFYGRLKGLSAAVVGPEQD 921
Query: 121 DILELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWEL 180
+L+ GL + + LS G++R++ +A A +V LDEPTAGVDP S+R WEL
Sbjct: 922 RLLQDVGLVSKQSVQTRHLSGGMQRKLSVAIAFVGGSQVVILDEPTAGVDPASRRGIWEL 981
Query: 181 IKEKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFGKTVRIVL 238
+ + E G T+IL++H L E E L DRV ++ G++ GSP L++ G + L
Sbjct: 982 LLKYRE--GRTLILSTHHLDEAELLGDRVAVVAGGRLCCCGSPLFLRRHLGSGYYLTL 1037
Score = 119 bits (296), Expect = 4e-26
Identities = 76/239 (31%), Positives = 118/239 (48%), Gaps = 3/239 (1%)
Query: 3 ILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSG 62
+L ++++TK + + + AV+ + GE G+LG NGAGKT+T RM+ G
Sbjct: 1792 VLVLRNLTKVYRGQR--MPAVDRLCLGIPPGECFGLLGVNGAGKTSTFRMVTGDTLASRG 1849
Query: 63 EVLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCEDI 122
E ++ G + P + Y Q + L+ R+++ R RG + +
Sbjct: 1850 EAVLAGHSVAREPSAAHLSMGYCPQSDAIFELLTGREHLELLARLRGVPEAQVAQTAGSG 1909
Query: 123 LELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIK 182
L GL +A + S G KR++ A AL D +VFLDEPT G+DP ++R W +
Sbjct: 1910 LARLGLSWYADRPAGTYSGGNKRKLATALALVGDPAVVFLDEPTTGMDPSARRFLWNSLL 1969
Query: 183 EKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFGKTVRIVLEEP 241
+ + G +V+LTSH + E E L R+ IM G+ GSP+ LK RF + L P
Sbjct: 1970 AVVRE-GRSVMLTSHSMEECEALCSRLAIMVNGRFRCLGSPQHLKGRFAAGHTLTLRVP 2027
>pir||E83222 NosF protein PA3394 [imported] - Pseudomonas aeruginosa (strain
PAO1) >gi|9949530|gb|AAG06782.1|AE004760_10 (AE004760)
NosF protein [Pseudomonas aeruginosa]
Length = 304
Score = 128 bits (318), Expect = 1e-28
Identities = 78/241 (32%), Positives = 133/241 (54%), Gaps = 11/241 (4%)
Query: 1 MPILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPD 60
M ++E+ T ++ G + A++ + GEVLG+LG NGAGKTTT++++ + P
Sbjct: 1 MSLVEIDGATLRY----GALTALSGLDLRLEPGEVLGLLGHNGAGKTTTIKLVLGLLAPS 56
Query: 61 SGEVLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCE 120
G V V G DA LE R+++ Y+ + P LS + + ++ R +G + +A +
Sbjct: 57 EGRVRVLGHDA--RSLEARRQLGYLPENVTFYPQLSGAETLRHFARLKGVAPAEAAR--- 111
Query: 121 DILELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWEL 180
+LE GL A ++ S G+++R+ LA AL + L+ LDEPT G+DP + + ++L
Sbjct: 112 -LLEQVGLGHAARRRLKTYSKGMRQRLGLAQALLGEPRLLLLDEPTVGLDPLATVELYQL 170
Query: 181 IKEKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFGKTVRIVLEE 240
+ ++L +G ++L SH L VE DR I+ G++ GS EL+++ R+ L
Sbjct: 171 L-DRLRGQGTGIVLCSHVLPGVETHIDRAAILAGGRLQVAGSLAELRRKAALPTRVRLAS 229
Query: 241 P 241
P
Sbjct: 230 P 230
>pir||S74476 ABC-type transport protein slr1113 - Synechocystis sp. (strain PCC
6803) >gi|1651700|dbj|BAA16628.1| (D90899) ABC
transporter [Synechocystis sp.]
Length = 332
Score = 127 bits (317), Expect = 1e-28
Identities = 79/248 (31%), Positives = 138/248 (54%), Gaps = 7/248 (2%)
Query: 22 AVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSGEVLV--DGIDAVKNPLEVR 79
AV NV S G V G++GPNGAGKTT +RM+AT P GE+ + D + A + L ++
Sbjct: 28 AVTNVDLSIAEGAVYGLMGPNGAGKTTLIRMLATAEEPTKGEIYLFGDRLVAGADNLRIK 87
Query: 80 KRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCEDILELFGLKTHAHKKPFQL 139
+ + Y+ + L L+V DY+ Y+ R + +++LEL L + H + L
Sbjct: 88 QYLGYLPDDYPLYEDLNVWDYLDYFARLYHLKNPGRRHRIQEVLELVQLTSKRHSRINSL 147
Query: 140 STGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIKEKLEDKGVTVILTSHDL 199
S G+K+R+ LA + + L+ LDEP +G+DP ++++ ++I+ L+ G+T++++SH L
Sbjct: 148 SRGMKQRLSLARTIIHEPILLLLDEPVSGLDPLARQQFRDIIR-VLQAAGMTILISSHVL 206
Query: 200 YEVEYLADRVIIMNQGKIVAEGSPKELKKRFG-KTVRIVLEEPIKNFELLKEELLRVKNV 258
++ L + +M G +V + +L R G +T+ I L E + E L++ L V
Sbjct: 207 SDLAELCTAIGVMELGCLVESTTLADLYNRLGQRTISIFLLEGV---EQLQDCLKNQPGV 263
Query: 259 KDVRLARD 266
+D ++ D
Sbjct: 264 EDWQINYD 271
>pir||D83194 polyamine transport protein PotA PA3607 [imported] - Pseudomonas
aeruginosa (strain PAO1)
>gi|9949764|gb|AAG06995.1|AE004781_3 (AE004781)
polyamine transport protein PotA [Pseudomonas
aeruginosa]
Length = 363
Score = 127 bits (317), Expect = 1e-28
Identities = 77/226 (34%), Positives = 126/226 (55%), Gaps = 7/226 (3%)
Query: 2 PILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDS 61
P+LE+++VT++F G+ AV+NVS + N+GE +LGP+G GKTT LRM+A +PDS
Sbjct: 4 PLLEIRNVTRRF----GDFTAVDNVSLTINTGEFFTLLGPSGCGKTTLLRMLAGFDQPDS 59
Query: 62 GEVLVDGIDAVKNPLEVRKRIAYMT-QEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCE 120
GE+ ++G D +E KR + Q L P +SV I + + G +K + E
Sbjct: 60 GEIRLNGQDLAG--VEPEKRPVHTVFQSYALFPHMSVAQNIAFPLKMAGVAKSEIDARVE 117
Query: 121 DILELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWEL 180
L+ L + P QLS G ++RV +A AL + L+ LDEP + +D + + +
Sbjct: 118 QALKDVRLADKGGRMPTQLSGGQRQRVAIARALVNRPRLLLLDEPLSALDAKLREEMQIE 177
Query: 181 IKEKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKEL 226
+ +D G+T + +HD E L+ R+ +MNQG++ +P+ +
Sbjct: 178 LINLQKDVGITFVYVTHDQGEALALSHRIAVMNQGRVEQLDAPETI 223
>emb|CAB53353.1| (AJ010260) NosF protein [Paracoccus denitrificans]
Length = 299
Score = 127 bits (316), Expect = 2e-28
Identities = 96/304 (31%), Positives = 154/304 (50%), Gaps = 19/304 (6%)
Query: 4 LEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSGE 63
L + +TK+F V A+ VS G + +LG NGAGK+T +++I + D+GE
Sbjct: 5 LTISRLTKRFQG----VEALAEVSLDLGPGMRVALLGHNGAGKSTMMKIILGLIPFDAGE 60
Query: 64 VLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCEDIL 123
V V G A + R ++AY+ + P L+ + I +Y RG S R A ++L
Sbjct: 61 VRVCG--AAPGSSQARMQVAYLPENAAFHPALTGEEQIRHYLSLRGESPRRAM----ELL 114
Query: 124 ELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIKE 183
E GL A ++ S G+++RV LA L L+ LDEPT+G+DP S+R + L+ +
Sbjct: 115 ERVGLAKAARRRIGTYSKGMRQRVGLAQTLIGRPRLLVLDEPTSGLDPVSRRDFYALL-D 173
Query: 184 KLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFGKTVRIVLEEPIK 243
L +G ++L+SH L EVE DR++I++QG++VAEG+ EL++R V + +
Sbjct: 174 GLAAEGAAILLSSHVLTEVEARTDRILILSQGRLVAEGTLAELRRRAALPVGLTVTPADG 233
Query: 244 NFELLKEELLRVKNVKDVRLARDDSFDVYFKSLDDSINGILQVISPQELKIKDIFTATAN 303
L L RLA D ++ D G+L I+ ++ D+ +
Sbjct: 234 AAGALAAAL------PQARLAGDGM--LHLACAQDEKLGLLARIAGLGAQVADLDVVPPS 285
Query: 304 FEDV 307
ED+
Sbjct: 286 LEDI 289
>emb|CAA11111.1| (AJ223088) hypothetical protein [Pseudomonas stutzeri]
Length = 241
Score = 127 bits (315), Expect = 2e-28
Identities = 79/229 (34%), Positives = 125/229 (54%), Gaps = 8/229 (3%)
Query: 1 MPILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPD 60
M +L+ + + K + + + V +VS S SG+++G+LGPNGAGKTT MIA + D
Sbjct: 1 MAVLKAQHLAKSYKSRQ----VVRDVSLSIESGQIVGLLGPNGAGKTTCFYMIAGLVNAD 56
Query: 61 SGEVLVDGIDAVKNPLEVRKR--IAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKH 118
G VL+D D P+ R R I Y+ QE + LSV D I+ R R ++
Sbjct: 57 QGRVLIDQNDVTHLPMHGRARAGIGYLPQEASIFRKLSVADNIMAILETRKDLDRSGRQQ 116
Query: 119 C-EDILELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKT 177
E +L+ F + + LS G +RRV++A AL++ + LDEP AGVDP S
Sbjct: 117 ALEGLLQEFHINHIRNSLGMSLSGGERRRVEIARALATAPKFILLDEPFAGVDPISVGDI 176
Query: 178 WELIKEKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKEL 226
++I L+ KG+ V++T H++ E + + I+N G+++AEG + +
Sbjct: 177 KQII-HHLKAKGIGVLITDHNVRETLDICETAYIVNDGQLIAEGDAQTI 224
>pir||H70610 probable ABC-typetransmembrane transport portein - Mycobacterium
tuberculosis (strain H37RV) >gi|3261727|emb|CAB07840.1|
(Z93777) hypothetical protein Rv1218c [Mycobacterium
tuberculosis]
Length = 311
Score = 126 bits (314), Expect = 3e-28
Identities = 92/307 (29%), Positives = 161/307 (51%), Gaps = 24/307 (7%)
Query: 4 LEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSGE 63
+E++ +TK F G V A++ + + GEV G LGPNGAGK+TTLR++ + + D G
Sbjct: 10 IEIRGLTKHF----GSVRALDGLDLTVREGEVHGFLGPNGAGKSTTLRILLGLVKADGGS 65
Query: 64 VLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCEDIL 123
V + G D + +++ + IAY+ + L P L+ + I R RG + +++
Sbjct: 66 VRLLGGDPWTDAVDLHRHIAYVPGDVTLWPSLTGGETIDLLARMRGGIDNARR---AELI 122
Query: 124 ELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIKE 183
E FGL KK S G +++V L ALSS L+ LDEP++G+DP + + I E
Sbjct: 123 ERFGL--DPTKKARTYSKGNRQKVSLISALSSHATLLLLDEPSSGLDPLMENVFQQCIGE 180
Query: 184 KLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFGKTVRI-VLEEPI 242
+GVTV+L+SH L E E L ++V I+ GK V GS L+ +++ ++ +P
Sbjct: 181 -ARQRGVTVLLSSHILAETEALCEKVTIIRAGKTVESGSLDALRHLSRTSIKAEMIGDP- 238
Query: 243 KNFELLKEELLRVKNVKDVRLARDDSFDVYFKSLDDSINGILQVISPQELKIKDIFTATA 302
+L ++K V+D+ + + V + +S+ ++QV+ ++ + +
Sbjct: 239 -------GDLSQIKGVEDISI---EGTTVRAQVDSESLRELIQVLG--HAGVRSLVSQPP 286
Query: 303 NFEDVYL 309
E+++L
Sbjct: 287 TLEELFL 293
>pir||G71905 probable ABC transporter, ATP-binding protein - Helicobacter pylori
(strain J99) >gi|4155205|gb|AAD06229.1| (AE001497)
putative abc transporter, ATP-binding protein
[Helicobacter pylori J99]
Length = 240
Score = 126 bits (314), Expect = 3e-28
Identities = 76/228 (33%), Positives = 121/228 (52%), Gaps = 7/228 (3%)
Query: 1 MPILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPD 60
M IL+ + + K+ K V++VS SGEV+G+LGPNGAGKTTT MI + P
Sbjct: 1 MDILKAEHLNKQIKKTK----IVSDVSLEVKSGEVVGLLGPNGAGKTTTFYMICGLLEPS 56
Query: 61 SGEVLVDGIDAVKNPLEVRKR--IAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKH 118
G V ++ +D K PL R I Y+ QE + LSV + + + +++++
Sbjct: 57 GGSVYLNDVDLAKYPLHKRSNLGIGYLPQESSIFKELSVEENLALAGESTFKNSKESEEK 116
Query: 119 CEDILELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTW 178
E +L+ F ++ +K LS G +RRV++A AL + V LDEP AGVDP +
Sbjct: 117 MESLLDAFNIQAIRERKGMSLSGGERRRVEIARALMKNPKFVLLDEPFAGVDPIAVIDIQ 176
Query: 179 ELIKEKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKEL 226
+I E L + V++T H++ E + R ++ G ++A G+ E+
Sbjct: 177 RII-ESLIGLNIGVLITDHNVRETLSVCHRAYVIKSGTLLASGNANEI 223
>pir||T33783 hypothetical protein Y39D8C.1 - Caenorhabditis elegans
>gi|3806158|gb|AAC69223.1| (AF101313) similar to the
ATP-binding transport protein family (ABC transporter)
(Pfam: ABC_tran.hmm, score: 162.68 and 139.46)
[Caenorhabditis elegans]
Length = 1802
Score = 126 bits (313), Expect = 4e-28
Identities = 72/227 (31%), Positives = 115/227 (49%), Gaps = 1/227 (0%)
Query: 18 GEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSGEVLVDGIDAVKNPLE 77
G AV V+F NS + G+LG NGAGKT+T +M+ SG+ V+G N E
Sbjct: 1460 GNFNAVKGVNFHVNSKDCFGLLGVNGAGKTSTFQMLTGENSISSGDAYVNGWSVKNNWRE 1519
Query: 78 VRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCEDILELFGLKTHAHKKPF 137
Y Q + +S + + + R RG ++D K ++ G+ +A ++
Sbjct: 1520 AGANTGYCPQYDAIIKEMSGEETLYMFARIRGIPEKDIPKKVNAVIHAIGIGMYASRQIK 1579
Query: 138 QLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIKEKLEDKGVTVILTSH 197
S G KRR+ L A+ ++ LDEPT+GVDP+++R W ++ +L D G ++LTSH
Sbjct: 1580 TYSGGNKRRLSLGIAIVGLPDVLLLDEPTSGVDPKARRIIWNIL-NRLRDLGTALVLTSH 1638
Query: 198 DLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFGKTVRIVLEEPIKN 244
+ E E L + IM GK GS + +K R+G +++ +N
Sbjct: 1639 SMDECEALCTELAIMVYGKFRCYGSCQHIKSRYGSGYTLLIRLKNRN 1685
Score = 116 bits (288), Expect = 3e-25
Identities = 73/243 (30%), Positives = 127/243 (52%), Gaps = 16/243 (6%)
Query: 1 MPILEVKSVTKKFPTP------------KGEVIAVNNVSFSANSGEVLGILGPNGAGKTT 48
+P + V ++TK + T GE AV+N++ G+ +LG NGAGK+T
Sbjct: 581 IPTINVVNLTKTYGTSFFKKLFDCKFGKSGEKRAVSNLNLKMYPGQCTVLLGHNGAGKST 640
Query: 49 TLRMIATIYRPDSGEVLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFR 108
T M+ + P SG V+ D + ++R+ + Q L ++V +++ ++ + +
Sbjct: 641 TFSMLTGVASPSSGSAYVNDFDIRTSLPKIRREMGLCPQYNTLFGFMTVMEHLEFFAKLK 700
Query: 109 GFSKRDAKKHCEDILELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAG 168
+ + +IL + A LS G KR++ LA AL +V LDEPT+G
Sbjct: 701 --ERTWDPEEAREILARLRIDFKADFMAGALSGGQKRKLSLAIALIGGSEVVMLDEPTSG 758
Query: 169 VDPRSKRKTWELIKEKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKK 228
+DP ++ +TW LI+ + E + T++LT+H + E + L DR+ IM G++ GSP LK+
Sbjct: 759 MDPGARHETWTLIQREKERR--TILLTTHFMEEADLLGDRIAIMAHGQLECCGSPMFLKQ 816
Query: 229 RFG 231
++G
Sbjct: 817 QYG 819
>pir||E75579 branched-chain amino acid ABC tranpsorter, ATP binding protein -
Deinococcus radiodurans (strain R1)
>gi|6460675|gb|AAF12380.1|AE001863_5 (AE001863)
branched-chain amino acid ABC tranpsorter, ATP binding
protein [Deinococcus radiodurans]
Length = 587
Score = 126 bits (313), Expect = 4e-28
Identities = 82/241 (34%), Positives = 137/241 (56%), Gaps = 20/241 (8%)
Query: 2 PILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDS 61
PIL+V++ K+F G + AVN+VSF N+GE++G++GPNGAGK+T ++ + S
Sbjct: 338 PILKVRNAVKQF----GGLKAVNDVSFDVNAGEIVGLIGPNGAGKSTMFNLVTGVNPATS 393
Query: 62 GEVLVDGIDAVKNPLEV--RKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFS-------- 111
G V V G DA + P R +A Q L P LS+ + + RG +
Sbjct: 394 GTVEVLGHDAGRLPARAIHRLGVARTFQHVKLFPELSLLENTMMGGYARGQAGLLRSMLH 453
Query: 112 -KRDAKKHCEDI----LELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPT 166
+R + + + LE GL A+++ L+ G +R +++A AL +D + LDEP
Sbjct: 454 LERGEEAALQGLALTQLERVGLSEQAYEQAGNLALGQQRLLEIARALVADPSFLLLDEPA 513
Query: 167 AGVDPRSKRKTWELIKEKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKEL 226
AG+ K++ L++ KL D+GVT+++ HD+ V L DR+++MN G+ +A+GSP+++
Sbjct: 514 AGLRFGEKQELATLLR-KLRDEGVTILIVEHDMDLVMNLVDRLVVMNSGQELAQGSPQQV 572
Query: 227 K 227
+
Sbjct: 573 R 573
>pir||H83240 probable ATP-binding component of ABC transporter PA3254 [imported]
- Pseudomonas aeruginosa (strain PAO1)
>gi|9949377|gb|AAG06642.1|AE004747_15 (AE004747)
probable ATP-binding component of ABC transporter
[Pseudomonas aeruginosa]
Length = 331
Score = 126 bits (313), Expect = 4e-28
Identities = 77/227 (33%), Positives = 125/227 (54%), Gaps = 7/227 (3%)
Query: 1 MPILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPD 60
M + V+ + K + G ++ F+A GE + +LGP+G GK+T LR IA + D
Sbjct: 1 MSFVSVEQLDKSY----GATSIFRDIDFAAARGEFVTLLGPSGCGKSTLLRCIAGLTEVD 56
Query: 61 SGEVLVDGIDAVKNPLEVRKR-IAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHC 119
SG +L+DG D V PL +KR IA + Q L P ++V+ + + R + + K+
Sbjct: 57 SGRILIDGEDVV--PLPPQKRGIAMVFQSYALFPNMTVQQNVAFGLRMQKVPAAELKQRV 114
Query: 120 EDILELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWE 179
+ +EL L +A + P QLS G +RV LA +L + L+ LDEP + +D R ++ E
Sbjct: 115 AEAIELVELGEYAARYPHQLSGGQCQRVALARSLVTRPRLLLLDEPLSALDARIRKHLRE 174
Query: 180 LIKEKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKEL 226
I+ ++ G+T + +HD E L+DR+++MN G+IV G + L
Sbjct: 175 QIRRIQQELGLTTVFVTHDQEEALTLSDRIVLMNAGRIVQSGDAETL 221
>pir||G72598 probable ABC transporter ATP-binding protein APE1255 - Aeropyrum
pernix (strain K1) >gi|5104931|dbj|BAA80245.1|
(AP000061) 253aa long hypothetical ABC transporter
ATP-binding protein [Aeropyrum pernix]
Length = 253
Score = 125 bits (312), Expect = 5e-28
Identities = 76/230 (33%), Positives = 123/230 (53%), Gaps = 6/230 (2%)
Query: 2 PILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDS 61
P +E + V K+ G + +VS + G V G++GPNGAGKTT R + +YR D
Sbjct: 11 PAVEAEGVWKRL----GGRWVLKDVSLTVPRGSVYGVVGPNGAGKTTLFRTLLGLYRADR 66
Query: 62 GEVLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCED 121
G V + G + + +R+AY+ ++ + ++ +++ Y G D + + E+
Sbjct: 67 GRVALLGEPVERAGGSLFRRVAYLPEDGEPYRNMTGHEFLRLYASIYGVE--DLEGYLEE 124
Query: 122 ILELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELI 181
L GL ++ S G++RR+ +A L+ L LDEPTAG+DP L+
Sbjct: 125 ASRLSGLGGRLGERVRSYSKGMRRRLLVAAMLALKPSLAVLDEPTAGLDPVYSVGIRRLL 184
Query: 182 KEKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFG 231
KE E GVTV+L+SH++YEVE + + +++ G+IV GSP E +R G
Sbjct: 185 KEYSERHGVTVLLSSHNMYEVESVCSEITMISSGRIVYSGSPGEAVRRTG 234
>pir||C72615 probable transport ATP-binding protein APE1380 - Aeropyrum pernix
(strain K1) >gi|5105063|dbj|BAA80377.1| (AP000061) 316aa
long hypothetical transport ATP-binding protein
[Aeropyrum pernix]
Length = 316
Score = 125 bits (311), Expect = 6e-28
Identities = 93/314 (29%), Positives = 163/314 (51%), Gaps = 20/314 (6%)
Query: 4 LEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSGE 63
+ +++K+F G+ A NV F+ SG +LG+LGPNGAGKTT L+ I + +P +GE
Sbjct: 9 VNASALSKRF----GQRYAYRNVEFTFTSG-ILGVLGPNGAGKTTLLKTILGLVKPSAGE 63
Query: 64 VLVDGIDAVKNPLE-VRKRIAYMTQEPDLTPPLSVRDYIIY--YFRFRGFSKRDAKKHCE 120
+LV+G++ E + RI Y+ + P PL I+ R G++ +A+
Sbjct: 64 ILVEGVNPRSPGFEKLLPRIGYVPELP--VVPLWTTPCILLETLARLEGYTSVEARVRAR 121
Query: 121 DILELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWEL 180
+ LE+ GL +LS G ++RV +A A + L+ LDEP +G+DP + EL
Sbjct: 122 EALEVVGLAGECETPIGKLSKGARKRVLVAQAFIGERELLVLDEPYSGLDPEWVYRVREL 181
Query: 181 IKEKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFGKTVRIVLE- 239
++ + +G TVI++SH L E+E +A V+++ ++ GS +EL+ T RI+L
Sbjct: 182 LR-TVAREGATVIVSSHILRELEDIATHVLVLKTDQLF-YGSIEELRAWLSGTPRIILSV 239
Query: 240 -EPIKNFELLKEELLRVKNVKDVRLARDDSFDVYFKSLDDSINGILQVISPQELKIKDIF 298
EP + E+L+ + + V + DD +L ++ + ++I +
Sbjct: 240 AEPERAVEVLRRGGFNAYTIN-----KGGQLVVAVEGADDPAR-VLSLLLAENIEISEYR 293
Query: 299 TATANFEDVYLEII 312
A+ E+ YL+++
Sbjct: 294 VEKASLEEAYLKLV 307
>pir||F82201 spermidine/putrescine ABC transporter, ATP-binding protein VC1428
[imported] - Vibrio cholerae (group O1 strain N16961)
>gi|9655926|gb|AAF94585.1| (AE004221)
spermidine/putrescine ABC transporter, ATP-binding
protein [Vibrio cholerae]
Length = 377
Score = 125 bits (311), Expect = 6e-28
Identities = 71/225 (31%), Positives = 124/225 (54%), Gaps = 5/225 (2%)
Query: 2 PILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDS 61
P++ + ++K F G+ I + N++ N GE L ILGP+G GKTT LRMIA D
Sbjct: 16 PVIRLSGISKSFD---GKEI-IGNLNLDVNHGEFLTILGPSGCGKTTVLRMIAGFETADQ 71
Query: 62 GEVLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCED 121
G++L+D D + P E R + + Q L P ++V + + + R + + + + +
Sbjct: 72 GQILLDDQDVTQVPAEQR-HVNTVFQSYALFPHMTVFENVAFGLRMQKVPQSEIEPRVME 130
Query: 122 ILELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELI 181
L + L A +KP QLS G ++R+ +A A+ + ++ LDE + +D + +++ +
Sbjct: 131 ALRMVRLAEMAQRKPHQLSGGQQQRIAIARAVVNKPKVLLLDESLSALDYKLRKQMQSEL 190
Query: 182 KEKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKEL 226
K+ G+T I +HD E ++DR+I+M GKI +GSP+E+
Sbjct: 191 KQLQRQLGITFIFVTHDQEEALSMSDRIIVMRSGKIEQDGSPREI 235
>pir||C64609 ABC transporter, ATP-binding protein - Helicobacter pylori (strain
26695) >gi|2313839|gb|AAD07765.1| (AE000584) ABC
transporter, ATP-binding protein [Helicobacter pylori
26695]
Length = 240
Score = 125 bits (310), Expect = 8e-28
Identities = 75/228 (32%), Positives = 122/228 (52%), Gaps = 7/228 (3%)
Query: 1 MPILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPD 60
M IL+ + + K+ K V++VS SGEV+G+LGPNGAGKTTT MI + P
Sbjct: 1 MDILKAEHLNKQIKKTK----IVSDVSLEVKSGEVVGLLGPNGAGKTTTFYMICGLLEPS 56
Query: 61 SGEVLVDGIDAVKNPLEVRKR--IAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKH 118
G V ++ ++ K PL R I Y+ QE + LSV + + + +++++
Sbjct: 57 GGSVYLNDVNLAKYPLHKRSNLGIGYLPQESSIFKELSVEENLALAGESTFKNSKESEEK 116
Query: 119 CEDILELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTW 178
E +L+ F ++ +K LS G +RRV++A AL + V LDEP AGVDP +
Sbjct: 117 MESLLDAFNIQAIRERKGMSLSGGERRRVEIARALMKNPKFVLLDEPFAGVDPIAVIDIQ 176
Query: 179 ELIKEKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKEL 226
++I E L + V++T H++ E + R ++ G ++A G+ E+
Sbjct: 177 KII-ESLIGLNIGVLITDHNVRETLSVCHRAYVIKSGTLLASGNANEI 223
>pir||C75369 amino acid ABC transporter, ATP-binding protein - Deinococcus
radiodurans (strain R1)
>gi|6459415|gb|AAF11206.1|AE002008_1 (AE002008) amino
acid ABC transporter, ATP-binding protein [Deinococcus
radiodurans]
Length = 265
Score = 124 bits (309), Expect = 1e-27
Identities = 74/226 (32%), Positives = 130/226 (56%), Gaps = 8/226 (3%)
Query: 2 PILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDS 61
PI+ ++V K F G A+ V+ + GEV+ I+GP+G+GK+T +R I + D
Sbjct: 24 PIIVAQNVQKHF----GTFHALRGVNLTVRQGEVVVIIGPSGSGKSTFIRTINALDPHDG 79
Query: 62 GEVLVDGI--DAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYI-IYYFRFRGFSKRDAKKH 118
G + VDG+ +N +R+ + + Q +L P L+V D I + R RG K A+
Sbjct: 80 GSITVDGLPLQGARNLDAIRREVGMVFQSFNLFPHLTVLDNITLAPTRVRGVDKAQAQAR 139
Query: 119 CEDILELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTW 178
D+L G++ A+K P QLS G ++RV +A AL+ + ++ DEPT+ +DP ++
Sbjct: 140 GLDLLRRVGIEEQAYKFPAQLSGGQQQRVAIARALAMEPKIMLFDEPTSALDPEMIKEVL 199
Query: 179 ELIKEKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPK 224
+++KE L G+T+++ +H++ +ADR++ +QG IV + +P+
Sbjct: 200 DVMKE-LARTGMTMLVVTHEMGFAREVADRILFFDQGNIVEDTTPE 244
>sp|P19844|NOSF_PSEST COPPER TRANSPORT ATP-BINDING PROTEIN NOSF >gi|95000|pir||S13584
nosF protein - Pseudomonas stutzeri
>gi|45849|emb|CAA37716.1| (X53676) ATP-binding protein,
peripheral [Pseudomonas stutzeri]
Length = 308
Score = 124 bits (308), Expect = 1e-27
Identities = 77/236 (32%), Positives = 135/236 (56%), Gaps = 11/236 (4%)
Query: 1 MPILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPD 60
M +E++ V++++ G + +++++ + GEVLG+ G NGAGKTT++++I + P
Sbjct: 1 MNAVEIQGVSQRY----GSMTVLHDLNLNLGEGEVLGLFGHNGAGKTTSMKLILGLLSPS 56
Query: 61 SGEVLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCE 120
G+V V G N +VR+++ Y+ + P LS R+ + ++ R +G A +
Sbjct: 57 EGQVKVLG--RAPNDPQVRRQLGYLPENVTFYPQLSGRETLRHFARLKG----AALTQVD 110
Query: 121 DILELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWEL 180
++LE GL A ++ S G+++R+ LA AL + L+ LDEPT G+DP + + + L
Sbjct: 111 ELLEQVGLAHAADRRVKTYSKGMRQRLGLAQALLGEPRLLLLDEPTVGLDPIATQDLYLL 170
Query: 181 IKEKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFGKTVRI 236
I ++L +G ++IL SH L VE +R I+ +G + A GS +L+ G VRI
Sbjct: 171 I-DRLRQRGTSIILCSHVLPGVEAHINRAAILAKGCLQAVGSLSQLRAEAGLPVRI 225
>pir||T36764 probable ABC-type transport system ATP-binding protein -
Streptomyces coelicolor >gi|5531452|emb|CAB50957.1|
(AL096849) putative ABC-transporter ATP-binding protein
[Streptomyces coelicolor A3(2)]
Length = 306
Score = 124 bits (308), Expect = 1e-27
Identities = 89/306 (29%), Positives = 154/306 (50%), Gaps = 22/306 (7%)
Query: 4 LEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSGE 63
+ V+ +TK++ G AV+++SF+ +G V G GPNGAGKTT L+ + + RP +G
Sbjct: 13 IRVEGLTKRY----GRATAVDDLSFTVGTGRVTGFFGPNGAGKTTALKAVVGLARPTAGR 68
Query: 64 VLVDGIDAVKNPLEVRKRIAYMTQEP-DLTPPLSVRDYIIYYFRFRGFSKRDAKKHCEDI 122
V G L+ R+ + EP P + R ++ G +R ++
Sbjct: 69 AFVRGTPVA--ALKPDARLLGVHIEPCGAHPGRTGRAHLRSLAALAGLPRR----RVGEV 122
Query: 123 LELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIK 182
LEL GL+ A + + S G+++R+ LA AL D ++ LDEP G+DP+ R L++
Sbjct: 123 LELVGLEEAARGRVGKYSMGMRQRLGLAAALLGDPEILVLDEPVNGLDPQGIRWLRTLLR 182
Query: 183 EKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFGKTVRIVLEEPI 242
E+ KG TV+L+SH L E D V+++N+G++V EG+ ++L++ + V + E
Sbjct: 183 ERAA-KGGTVLLSSHMLGEAAQTVDDVVVINRGRLVHEGAIRDLERSGERVVAVRTAE-- 239
Query: 243 KNFELLKEELLRVKNVKDVRLARDDSFDVYFKSLDDSINGILQVISPQELKIKDIFTATA 302
E L + R DD + + LD + + ++ + +++I TA
Sbjct: 240 ------AERLSELVTAAGGRTKTDDGGRLLVEGLD--VTEVARLAHRDGVLVEEITERTA 291
Query: 303 NFEDVY 308
+ ED +
Sbjct: 292 SLEDAF 297
>sp|P73450|NRTC_SYNY3 NITRATE TRANSPORT ATP-BINDING PROTEIN NRTC >gi|7445984|pir||S77387
nitrate transport protein C-2 - Synechocystis sp.
(strain PCC 6803) >gi|1652569|dbj|BAA17490.1| (D90906)
nitrate transport protein NrtC [Synechocystis sp.]
Length = 670
Score = 123 bits (306), Expect = 2e-27
Identities = 74/218 (33%), Positives = 120/218 (54%), Gaps = 7/218 (3%)
Query: 1 MPILEVKSVTKKFPTPKG-EVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRP 59
MP +E+ V + FP P G IA+ N+ + GE + ++G +G GK+T L MI+ + +P
Sbjct: 2 MPFIEIDHVDRIFPLPDGGRYIALKNIELKISQGEFISLIGHSGCGKSTLLNMISGLDKP 61
Query: 60 DSGEVLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFR--FRGFSKRDAKK 117
G V+++G K E + Q L P L+VR I R K + +K
Sbjct: 62 TFGGVIMEG----KEITEPGPERMVVFQNYSLLPWLTVRQNIALAVNRVLRDLPKPEQEK 117
Query: 118 HCEDILELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKT 177
+D + L GL+ AHK+P +LS G+K+RV +A ALS+ ++ LDEP +D ++
Sbjct: 118 IIDDNIALVGLQRAAHKRPGELSGGMKQRVAIARALSTRPKVLLLDEPFGALDALTRGNL 177
Query: 178 WELIKEKLEDKGVTVILTSHDLYEVEYLADRVIIMNQG 215
E + E +++ GVT I+ +HD+ E L+DRV+++ G
Sbjct: 178 QERLMEIVQESGVTCIMVTHDVDEALLLSDRVVMLTTG 215
>gb|AAC36155.1| (AF003632) PilH [Myxococcus xanthus]
Length = 326
Score = 123 bits (306), Expect = 2e-27
Identities = 85/296 (28%), Positives = 156/296 (51%), Gaps = 11/296 (3%)
Query: 19 EVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSGEVLVDGIDAVKNPLEV 78
+V A+ + G+V G+LGPNGAGK+TT++++ + R G+ L+ G + P V
Sbjct: 31 QVKALQGLDLEIAPGQVYGLLGPNGAGKSTTIKILMGLVRASEGQALLFG-EPPDRP-HV 88
Query: 79 RKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCEDILELFGLKTHAHKKPFQ 138
R+++ ++ + P L L+ R+++ R G S + + E +L G+ + + +
Sbjct: 89 RRQVGFLPENPSLYEYLTGREFVTLAGRIFGLSGHELDQRVERVLGDVGMGRASDLQIRR 148
Query: 139 LSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIKEKLEDKGVTVILTSHD 198
S G+ +R LA AL S L+ LDEPT+G+DP +R+ +LI + KG T++ +H
Sbjct: 149 YSKGMVQRTALAQALISGPRLLVLDEPTSGLDPLGRRQMRDLILAE-RAKGTTILFCTHI 207
Query: 199 LYEVEYLADRVIIMNQGKIVAEGSPKELKKRFGKTVRIVLEEPIKNFELLKEELLRVKNV 258
+ +VE L DRV+++ G+ V EGS ++L +V +V+ L E+L+
Sbjct: 208 ISDVESLCDRVVVLVGGRRVQEGSVQDLVSAKAPSVEMVVHG-------LPLEVLQSLGF 260
Query: 259 KDVRLARDDSFDVYFKSLDDSINGILQVISPQELKIKDIFTATANFEDVYLEIIER 314
+ DS V + D +G+LQ + + ++ + A + ED++LE +++
Sbjct: 261 SYEHAQQLDS-RVLLRIPDADSHGLLQTVISKGGRVSRVQPARFSLEDLFLEAMKQ 315
>gi|10955070 agtA [Agrobacterium tumefaciens]
>gi|6689864|gb|AAF23877.1|AF117204_2 (AF242881) agtA
[Agrobacterium tumefaciens]
Length = 359
Score = 123 bits (306), Expect = 2e-27
Identities = 71/226 (31%), Positives = 121/226 (53%), Gaps = 5/226 (2%)
Query: 1 MPILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPD 60
+P + + VT++F G V AV+NVS + GE +LG +G+GKTT L ++A P+
Sbjct: 6 LPAVSFQGVTRRF----GPVTAVDNVSLDISQGEFFALLGSSGSGKTTLLTLLAGFDNPN 61
Query: 61 SGEVLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCE 120
G+VL+ G+ P +++I + Q L P L+ + + Y R RG ++ + ++ +
Sbjct: 62 EGQVLMSGVSVSDVPPH-KRQIGVVFQNYALFPHLTAAENVAYPLRMRGVARHEREERVK 120
Query: 121 DILELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWEL 180
L L L P QLS G ++RV LA AL ++ +DEP +D R + + +
Sbjct: 121 AALALVNLSDRLGAYPIQLSGGQQQRVALARALVFSPAILLMDEPLGALDRRLRDQMQQE 180
Query: 181 IKEKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKEL 226
+K + G+TVI +HD E +ADR+ IM+ G+++ P+ +
Sbjct: 181 LKRIQHELGITVIYVTHDQSEAMAMADRIGIMSAGRLLQVADPEAI 226
>pir||E83087 probable ATP-binding component of ABC transporter PA4461 [imported]
- Pseudomonas aeruginosa (strain PAO1)
>gi|9950697|gb|AAG07849.1|AE004860_5 (AE004860) probable
ATP-binding component of ABC transporter [Pseudomonas
aeruginosa]
Length = 241
Score = 123 bits (305), Expect = 3e-27
Identities = 79/229 (34%), Positives = 125/229 (54%), Gaps = 8/229 (3%)
Query: 1 MPILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPD 60
M L+ + + K + KG + V +VS S +SG+++G+LGPNGAGKTT MI + + D
Sbjct: 1 MATLKAQHLAKSY---KGRQV-VRDVSMSIDSGQIVGLLGPNGAGKTTCFYMIVGLVQAD 56
Query: 61 SGEVLVDGIDAVKNPLEVRKR--IAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKH 118
G V +D + P+ R R I Y+ QE + LSV D I+ R R+ +K
Sbjct: 57 QGVVRIDEQNVTHLPMHGRARAGIGYLPQEASIFRKLSVSDNIMAILETRSDLDRNGRKE 116
Query: 119 C-EDILELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKT 177
E +L+ F + LS G +RRV++A AL+S + LDEP AGVDP S
Sbjct: 117 ALEGLLQEFHIHHIRDNLGMSLSGGERRRVEIARALASAPKFILLDEPFAGVDPISVGDI 176
Query: 178 WELIKEKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKEL 226
++I L+ KG+ +++T H++ E + + I+N G+++AEG + +
Sbjct: 177 KQII-HHLKAKGIGILITDHNVRETLDICETAYIVNDGQLIAEGDAESI 224
>pir||E69771 ABC transporter (ATP-binding protein) homolog ydbJ - Bacillus
subtilis >gi|1881259|dbj|BAA19286.1| (AB001488) PROBABLE
TRANSPORT ATP BINDING PROTEIN. [Bacillus subtilis]
>gi|2632749|emb|CAB12256.1| (Z99106) similar to ABC
transporter (ATP-binding protein) [Bacillus subtilis]
Length = 308
Score = 122 bits (304), Expect = 4e-27
Identities = 72/221 (32%), Positives = 120/221 (53%), Gaps = 7/221 (3%)
Query: 2 PILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDS 61
PIL ++ + KK G + +S GE++G+LGPNG+GKTT +R+I + + +S
Sbjct: 4 PILHIEGLDKKI----GSKQILKQISMDVMEGEIIGLLGPNGSGKTTLIRIIVGLLKQNS 59
Query: 62 GEVLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCED 121
G V + G + + + + + P+ P L+ + + + F K+ A + ++
Sbjct: 60 GSVTISGFQHDTEFEKAMEAVGAIVENPEFYPYLTGWENLKH---FANMHKKIADERLDE 116
Query: 122 ILELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELI 181
++E GL + H K S G+++R+ +A A+ L+ LDEPT G+DP + + I
Sbjct: 117 VVERVGLTSAIHDKVKTYSLGMRQRLGIAQAILHRPKLLILDEPTNGLDPAGMKDFRDHI 176
Query: 182 KEKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGS 222
KE E +G V+ +H L EVE L DRVII+ +G+I AE S
Sbjct: 177 KELAEMEGTAVLFATHLLREVEDLCDRVIIIQKGEIKAEVS 217
>gi|10956101 ABC transporter subunit PenL [Pediococcus pentosaceus]
>gi|10956124|ref|NP_037576.1| putative ABC transporter
ATP-binding subunit [Pediococcus pentosaceus]
>gi|4587880|gb|AAD25906.1|AF069302_15 (AF069302) ABC
transporter subunit PenL [Pediococcus pentosaceus]
>gi|5091682|gb|AAD39629.1|AF033858_12 (AF033858)
putative ABC transporter ATP-binding subunit
[Pediococcus pentosaceus]
Length = 313
Score = 122 bits (304), Expect = 4e-27
Identities = 88/313 (28%), Positives = 160/313 (51%), Gaps = 14/313 (4%)
Query: 3 ILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSG 62
IL + V K K +N+VSFS G++L +LGPNGAGKTT +R+I ++ DSG
Sbjct: 7 ILTLSKVNKSISQKK----VINDVSFSLEKGKILALLGPNGAGKTTIIRLITSLIEQDSG 62
Query: 63 EVLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCEDI 122
+ V D NP +R+ I+ + + +L L++ + + + F + + ++
Sbjct: 63 VISVFNGDI--NPSNIRQNIS-VQNDGNLYENLTIFENLKIWGGFYEIPEDHLEVKISEL 119
Query: 123 LELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIK 182
F + + K +LS G+K++V + AL ++ L+ LDEPT+G+DP +++
Sbjct: 120 TSRFEISERLNSKVGELSKGMKQKVLIIRALLTNPKLLILDEPTSGLDPYMIDLLTKILT 179
Query: 183 EKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFGKTVRIVLEEPI 242
E ++ T+I+ +H L +E +AD V+I+N+G++V G +L TV + +
Sbjct: 180 EYVKRHETTIIMATHQLLGLESIADDVLILNKGEVVVHGKTTQLISDCWPTVELDVLSDK 239
Query: 243 KNFELLKEELLRVKNV----KDVRLARD--DSFDVYFKSLDDSINGI-LQVISPQELKIK 295
+NFE + L NV D+ + R ++ D + + + D N I + I+ +K
Sbjct: 240 ENFENNLDYLTANFNVIHSSFDINITRIMLETKDNHSRVIADIANDIPVNGITIVNHTVK 299
Query: 296 DIFTATANFEDVY 308
+++ T E +Y
Sbjct: 300 ELYFKTLGVEQIY 312
>gb|AAF33771.1|AF219259_4 (AF219259) YhbG [Haemophilus ducreyi]
Length = 241
Score = 122 bits (304), Expect = 4e-27
Identities = 73/229 (31%), Positives = 127/229 (54%), Gaps = 8/229 (3%)
Query: 1 MPILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPD 60
MP L + + K + + V +VS + +GE++G+LGPNGAGKTTT M+ + R D
Sbjct: 1 MPTLYAEHLAKSYKNRQ----VVKDVSLNVKAGEIIGLLGPNGAGKTTTFYMVVGLVRHD 56
Query: 61 SGEVLVDGIDAVKNPLEVRKR--IAYMTQEPDLTPPLSVRDYIIYYFRFR-GFSKRDAKK 117
G++ +D D P+ R + I Y+ QE + LSV D ++ + R + + K
Sbjct: 57 QGKIRIDDQDISVLPMHDRAKYGIGYLPQEASIFHRLSVYDNLMAVLQVRKDLNNQQRKD 116
Query: 118 HCEDILELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKT 177
E+++ F ++ LS G +RRV++A AL+++ + LDEP AGVDP S
Sbjct: 117 RAEELISEFHIEHIRDNLGQALSGGERRRVEIARALAANPQFILLDEPFAGVDPISVIDI 176
Query: 178 WELIKEKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKEL 226
++I L+ +G+ V++T H++ E + R I+ G+++A G+P+++
Sbjct: 177 KKIIVH-LKQRGLGVLITDHNVRETLNVCQRAYIVGSGQMIANGTPEQI 224
>pir||F82303 ABC transporter, ATP-binding protein VC0589 [imported] - Vibrio
cholerae (group O1 strain N16961)
>gi|9655020|gb|AAF93756.1| (AE004144) ABC transporter,
ATP-binding protein [Vibrio cholerae]
Length = 305
Score = 122 bits (303), Expect = 6e-27
Identities = 73/226 (32%), Positives = 121/226 (53%), Gaps = 4/226 (1%)
Query: 1 MPILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPD 60
M LE++ + K + G A+ +S G+ +LGPNGAGK+TT+ +I+++
Sbjct: 1 MYALEIEQLRKTYA---GGFEALKGISLQVKKGDFYALLGPNGAGKSTTIGIISSLVNKT 57
Query: 61 SGEVLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCE 120
SG+V V G D ++++ + QE + P +V ++ + G K AK+ +
Sbjct: 58 SGKVTVFGYDLDSQLELAKQKLGLVPQEFNFNPFETVEQIVLQQAGYYGVPKALAKERAK 117
Query: 121 DILELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWEL 180
L L ++ LS G+KRR+ +A AL + L+ LDEPTAGVD +R WE
Sbjct: 118 KYLTQLDLWEKRSERARNLSGGMKRRLMIARALMHEPQLLILDEPTAGVDIELRRSMWEF 177
Query: 181 IKEKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKEL 226
+K+ + +GVT+ILT+H L E E L + I+ +G+++ + K L
Sbjct: 178 LKQ-INAQGVTIILTTHYLEEAEMLCRHIGIIQRGELIENTTMKSL 222
>dbj|BAB09013.1| (AB012239) contains similarity to ABC transporter~gene_id:K11J9.22
[Arabidopsis thaliana]
Length = 953
Score = 122 bits (302), Expect = 7e-27
Identities = 95/311 (30%), Positives = 148/311 (47%), Gaps = 30/311 (9%)
Query: 22 AVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSGEVLVDGIDAVKNPL---EV 78
AV + + ++ +LGPNGAGKTTT+ + I G+ L+ G D++++ + +
Sbjct: 547 AVKGLWMNIAKDQLFCLLGPNGAGKTTTISCLTGINPVTGGDALIYG-DSIRSSVGISNI 605
Query: 79 RKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCEDILELFGLKTHAHKKPFQ 138
RK I Q L LS ++ + +G K E +L L A +
Sbjct: 606 RKMIGVCPQFDILWDALSSEQHLHLFASIKGLPPASIKSTAEKLLADVKLTGAAKVRAGS 665
Query: 139 LSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIKEKLEDKGVTVILTSHD 198
S G+KRR+ +A AL D LVFLDEPT G+DP ++R W++I+E KG +ILT+H
Sbjct: 666 YSGGMKRRLSVAVALIGDPKLVFLDEPTTGMDPITRRHVWDIIQE--SKKGRAIILTTHS 723
Query: 199 LYEVEYLADRVIIMNQGKIVAEGSPKELKKRFG----KTVRIV------------LEEPI 242
+ E + L+DR+ IM +G++ G+ LK RFG TV + EP+
Sbjct: 724 MEEADILSDRIGIMAKGRLRCIGTSIRLKSRFGTGFVATVSFIENKNDNNIGVGASHEPL 783
Query: 243 KNFELLKEELLRVKNVKDVRLARDDSFDVYFKSLDDSINGILQVISPQELK--IKDIFTA 300
K F KE L V+ + V ++ + G + + +E + I DI
Sbjct: 784 KKF--FKEHL----KVEPTEENKAFMTFVIPHDKENLLTGFFEELQNRESEFGISDIQLG 837
Query: 301 TANFEDVYLEI 311
A E+V+L I
Sbjct: 838 LATLEEVFLNI 848
>pir||G71014 probable dipeptide transport ATP-binding protein dppF - Pyrococcus
horikoshii >gi|3257836|dbj|BAA30519.1| (AP000006) 329aa
long hypothetical dipeptide transport ATP-binding
protein dppF [Pyrococcus horikoshii]
Length = 329
Score = 121 bits (300), Expect = 1e-26
Identities = 80/232 (34%), Positives = 121/232 (51%), Gaps = 12/232 (5%)
Query: 2 PILEVKSVTKKFPT-----PKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATI 56
P+L+V+++ K FP G V AV+ VSF GE G++G +G GKTTT R I +
Sbjct: 7 PVLKVENLKKYFPVRGLLRTVGWVKAVDGVSFEIYKGETFGLVGESGCGKTTTGRTILRL 66
Query: 57 YRPDSGEVLVDGIDAVK---NPLE-VRKRIAYMTQEP--DLTPPLSVRDYIIYYFRFRGF 110
P G ++ G D K N L+ R++ M Q+P L P +V I+ RF G
Sbjct: 67 IEPTDGRIIFMGKDVTKLKGNELKWFRRKAQIMFQDPYSSLDPRQTVFQIIMEPVRFHGI 126
Query: 111 SKRDAKKHCEDILELFGL-KTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGV 169
D ++ +LE GL + H ++ P + S G ++R+ LA L+ + LDEPT+ +
Sbjct: 127 QVDDPEEFVIKLLESVGLNEMHLYRYPHEFSGGQRQRIALARLLALKPEFIVLDEPTSAL 186
Query: 170 DPRSKRKTWELIKEKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEG 221
D + +KE E G T + SHDL V+Y++DR+ +M GK+V G
Sbjct: 187 DVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVG 238
>pir||G81926 probable polyamine permease ATP-binding protein NMA0816 [imported]
- Neisseria meningitidis (group A strain Z2491)
>gi|7379535|emb|CAB84098.1| (AL162754) putative
polyamine permease ATP-binding protein [Neisseria
meningitidis Z2491]
Length = 374
Score = 121 bits (300), Expect = 1e-26
Identities = 71/226 (31%), Positives = 124/226 (54%), Gaps = 7/226 (3%)
Query: 2 PILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDS 61
P L+++ + KKF G+ AV+N+ E+ +LG +G+GK+T LRM+A + P+
Sbjct: 11 PYLQIQGLVKKF----GDNYAVDNIDLDIYQHEIFALLGSSGSGKSTLLRMLAGMENPNQ 66
Query: 62 GEVLVDGIDAVK-NPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCE 120
G++++DG D K P + + I M Q L P ++V I + + K + E
Sbjct: 67 GKIILDGQDITKLAPYD--RPINMMFQSYALFPHMTVEQNIAFGLKQDKMPKGEIAARVE 124
Query: 121 DILELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWEL 180
++L L + A +KP QLS G ++R+ LA +L+ ++ LDEP +D + +++T
Sbjct: 125 EMLRLVQMTKFAKRKPHQLSGGQQQRIALARSLAKRPKILLLDEPLGALDKKLRQQTQLE 184
Query: 181 IKEKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKEL 226
+ LE GVT I+ +HD E +A R+ IM+ G++ G+P ++
Sbjct: 185 LVNTLEQVGVTCIMVTHDQEEAMTMATRIAIMSDGQLQQVGTPSDV 230
>dbj|BAB10073.1| (AB010069) contains similarity to ABC transporter~gene_id:MAC9.4
[Arabidopsis thaliana]
Length = 950
Score = 121 bits (300), Expect = 1e-26
Identities = 94/314 (29%), Positives = 149/314 (46%), Gaps = 36/314 (11%)
Query: 22 AVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSGEVLVDGIDAVKNPL---EV 78
AV + + ++ +LGPNGAGKTTT+ + I G+ + G +++++ + +
Sbjct: 548 AVKGLWMNIAKDQLFCLLGPNGAGKTTTISCLTGINPVTGGDAKIYG-NSIRSSVGMSNI 606
Query: 79 RKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCEDILELFGLKTHAHKKPFQ 138
RK I Q L LS +++ + +G K E +L L A +
Sbjct: 607 RKMIGVCPQFDILWDALSSEEHLHLFASIKGLPPSSIKSIAEKLLVDVKLTGSAKIRAGS 666
Query: 139 LSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIKEKLEDKGVTVILTSHD 198
S G+KRR+ +A AL D LVFLDEPT G+DP ++R W++I+E KG +ILT+H
Sbjct: 667 YSGGMKRRLSVAIALIGDPKLVFLDEPTTGMDPITRRHVWDIIQE--SKKGRAIILTTHS 724
Query: 199 LYEVEYLADRVIIMNQGKIVAEGSPKELKKRFG----KTVRIV------LEEPIKNFELL 248
+ E + L+DR+ IM +G++ G+ LK RFG TV + EP+K F
Sbjct: 725 MEEADILSDRIGIMAKGRLRCIGTSIRLKSRFGTGFVATVSFIENKKDGAPEPLKRF--- 781
Query: 249 KEELLRVKNVKD--------VRLARDDSFDVYFKSLDDSINGILQVISPQELKIKDIFTA 300
+E L+V+ ++ + ++ +F L D E I DI
Sbjct: 782 FKERLKVEPTEENKAFMTFVIPHDKEQLLKGFFAELQD---------RESEFGIADIQLG 832
Query: 301 TANFEDVYLEIIER 314
A E+V+L I R
Sbjct: 833 LATLEEVFLNIARR 846
>dbj|BAA75384.1| (AB013374) MsmX [Bacillus halodurans]
Length = 349
Score = 120 bits (298), Expect = 2e-26
Identities = 75/232 (32%), Positives = 127/232 (54%), Gaps = 13/232 (5%)
Query: 1 MPILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPD 60
M ++++ +TK F AV++V + GE++ +LGP+G GKTTTLRMIA +P
Sbjct: 1 MSFIQLRDLTKTFSHTLKP--AVDSVHLTIEKGEIIALLGPSGCGKTTTLRMIAGFEQPT 58
Query: 61 SGEVLVDGIDAVKNPLEV---RKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSK---RD 114
SG + + G +N V ++ I + Q+ L P L++ +++ G SK R
Sbjct: 59 SGSIKIGGEVVYENQFTVPPEKRGIGMVFQDYALFPHLTIAKNVMF-----GLSKWGTRA 113
Query: 115 AKKHCEDILELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSK 174
++ +++LEL GL +A + P +LS G ++RV LA AL+ +V +DEP + +D +
Sbjct: 114 KRERAKEVLELVGLADYAARYPHELSGGQQQRVALARALAPKPHVVLMDEPFSNLDAGLR 173
Query: 175 RKTWELIKEKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKEL 226
K + L T I+ +HD + +ADRV++MN+G I +P+E+
Sbjct: 174 EKMRFEVTTILRKANATAIIVTHDQKDAFAVADRVVVMNEGVIQQIATPREM 225
>pir||C81179 spermidine/putrescine ABC transporter, ATP-binding protein NMB0610
[imported] - Neisseria meningitidis (group B strain
MD58) >gi|7225840|gb|AAF41037.1| (AE002416)
spermidine/putrescine ABC transporter, ATP-binding
protein [Neisseria meningitidis MC58]
Length = 419
Score = 120 bits (298), Expect = 2e-26
Identities = 71/226 (31%), Positives = 124/226 (54%), Gaps = 7/226 (3%)
Query: 2 PILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDS 61
P L+++ + KKF G+ AV+N+ E+ +LG +G+GK+T LRM+A + P+
Sbjct: 56 PYLKIQGLVKKF----GDNYAVDNIDLDIYQHEIFALLGSSGSGKSTLLRMLAGMESPNQ 111
Query: 62 GEVLVDGIDAVK-NPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCE 120
G++++DG D K P + + I M Q L P ++V I + + K + E
Sbjct: 112 GKIILDGQDITKLAPYD--RPINMMFQSYALFPHMTVEQNIAFGLKQDKMPKGEIAARVE 169
Query: 121 DILELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWEL 180
++L L + A +KP QLS G ++R+ LA +L+ ++ LDEP +D + +++T
Sbjct: 170 EMLRLVQMTKFAKRKPHQLSGGQQQRIALARSLAKRPKILLLDEPLGALDKKLRQQTQLE 229
Query: 181 IKEKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKEL 226
+ LE GVT I+ +HD E +A R+ IM+ G++ G+P ++
Sbjct: 230 LVNTLEQVGVTCIMVTHDQEEAMTMATRIAIMSDGQLQQVGTPSDV 275
>dbj|BAB04231.1| (AP001508) ABC transporter (ATP-binding protein) [Bacillus
halodurans]
Length = 349
Score = 120 bits (298), Expect = 2e-26
Identities = 75/232 (32%), Positives = 127/232 (54%), Gaps = 13/232 (5%)
Query: 1 MPILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPD 60
M ++++ +TK F AV++V + GE++ +LGP+G GKTTTLRMIA +P
Sbjct: 1 MSFIQLRDLTKTFSHTLKP--AVDSVHLTIEKGEIIALLGPSGCGKTTTLRMIAGFEQPT 58
Query: 61 SGEVLVDGIDAVKNPLEV---RKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSK---RD 114
SG + + G +N V ++ I + Q+ L P L++ +++ G SK R
Sbjct: 59 SGSIKIGGEVVYENQFTVPPEKRGIGMVFQDYALFPHLTIAKNVMF-----GLSKWGTRA 113
Query: 115 AKKHCEDILELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSK 174
++ +++LEL GL +A + P +LS G ++RV LA AL+ +V +DEP + +D +
Sbjct: 114 KRERAKEVLELVGLADYAARYPHELSGGQQQRVALARALAPKPHVVLMDEPFSNLDAGLR 173
Query: 175 RKTWELIKEKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKEL 226
K + L T I+ +HD + +ADRV++MN+G I +P+E+
Sbjct: 174 EKMRFEVTTILRKANATAIIVTHDQKDAFAVADRVVVMNEGVIQQIATPREM 225
>pir||G71271 probable ABC transporter natA - syphilis spirochete
>gi|3323192|gb|AAC65843.1| (AE001257) ABC transporter,
ATP-binding protein (natA) [Treponema pallidum]
Length = 268
Score = 120 bits (297), Expect = 3e-26
Identities = 78/244 (31%), Positives = 131/244 (52%), Gaps = 12/244 (4%)
Query: 1 MPILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPD 60
M +L V S+TK + + + V +V+F G+V GILG NGAGK+T LR+I + P
Sbjct: 1 MEVLRVTSLTKHYGSRRHPVRGCEDVTFCVERGQVCGILGLNGAGKSTVLRVIGGLIHPS 60
Query: 61 SGEVLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCE 120
SGEV + P+ R+ I + ++ L ++V +I++ R F D +
Sbjct: 61 SGEVYACHCSLSRYPVGYRRHIGVLHEQNPLYADMTVEQHILFVARI--FQLADGEARTA 118
Query: 121 DILELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWEL 180
+++ELF L++ AH++ LS G K+RV LA AL L+ LDEP +G+D + E
Sbjct: 119 EMIELFQLQSVAHRRVRNLSKGYKQRVGLAQALVHRPKLLVLDEPLSGLDIVYLK---EF 175
Query: 181 IKEKL-EDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFGKTVRIVLE 239
KE + ++ + V+ ++H + E+E L D ++++ G ++ G+ ++ RIV E
Sbjct: 176 HKEIVAQNNNLAVVFSTHAVQEIEALCDVFVLLHAGHVLFSGNRAQI------AARIVRE 229
Query: 240 EPIK 243
P K
Sbjct: 230 FPEK 233
>pir||H72555 probable transporter ATP-binding protein APE1732 - Aeropyrum pernix
(strain K1) >gi|5105420|dbj|BAA80733.1| (AP000062) 358aa
long hypothetical transporter ATP-binding protein
[Aeropyrum pernix]
Length = 358
Score = 120 bits (297), Expect = 3e-26
Identities = 85/306 (27%), Positives = 147/306 (47%), Gaps = 13/306 (4%)
Query: 4 LEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSGE 63
+ ++SVTK+F G +A++ VS + + GE+ +LGP+G GKTTTLR+IA PD G
Sbjct: 4 IRLESVTKRF----GNTVALDRVSLNISDGEIFTLLGPSGCGKTTTLRVIAGFETPDEGR 59
Query: 64 VLVDGIDAVK-NPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCEDI 122
V + D P E + A + Q L P + V D I Y + R + + +
Sbjct: 60 VYIGSRDVTMLKPYE--RNTAMVFQNYALWPHMRVFDNIAYGLKLRKLPRSEIVRRVRWA 117
Query: 123 LELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIK 182
EL + + P QLS G ++RV +A A+ ++ ++ +DEP + +D + K E I
Sbjct: 118 AELLEIDHLLDRYPHQLSGGQQQRVAVARAIVTEPEVLLMDEPLSNLDAHLRLKMREEIV 177
Query: 183 EKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFGKTVRIVLEEPI 242
+ GVT++ +HD E ++ RV +MN+G++ G+P E+ + K + I
Sbjct: 178 RLQKRLGVTIVYVTHDQEEALSISHRVAVMNRGRVEQVGTPMEV---YEKPATYFVATFI 234
Query: 243 KNFELLKEELLRVKNVKDVRLARDDSFDVYFKSLDDSI---NGILQVISPQELKIKDIFT 299
+L + V VR+A + + ++ + + VI P+ +K+ +
Sbjct: 235 GRSTVLDGRVSEVLGSGMVRVALEGGLSIVGTDMEGGLRQGERVKVVIRPERVKVGHEYN 294
Query: 300 ATANFE 305
FE
Sbjct: 295 GENVFE 300
>gi|11499426 cobalt transport ATP-binding protein (cbiO-2) [Archaeoglobus
fulgidus] >gi|7445783|pir||H69479 cobalt transport
ATP-binding protein (cbiO-2) homolog - Archaeoglobus
fulgidus >gi|2648707|gb|AAB89412.1| (AE000976) cobalt
transport ATP-binding protein (cbiO-2) [Archaeoglobus
fulgidus]
Length = 238
Score = 119 bits (296), Expect = 4e-26
Identities = 77/231 (33%), Positives = 134/231 (57%), Gaps = 12/231 (5%)
Query: 1 MPILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPD 60
+ ++E SV+ +P V VS G+ +G++G NG+GK+T + ++A + RP
Sbjct: 5 LKVIEADSVSYDYPDGSA---GVREVSLEIFEGDRVGLIGANGSGKSTLILLLAGLLRPT 61
Query: 61 SGEVLVDGIDA-VKNPLEVRKRIAYMTQEPD--LTPPLSVRDYIIYYFRFRGFSKRDAKK 117
G++ + G + KN E+R++I + Q PD L P +VRD ++Y R +S+ + +
Sbjct: 62 KGKIRIFGREIDKKNVEEIRRKIGVVFQNPDDFLFNP-TVRDELLYVPRQLEWSEEEMEN 120
Query: 118 HCEDILELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKT 177
++ E+FG+ +K PF+LS G K++V++A L ++ LDEPTA VD ++KR
Sbjct: 121 AVKEYAEMFGITHLLNKPPFRLSGGEKKKVEIASVLIYKPEVLLLDEPTAYVDGKTKR-- 178
Query: 178 WELIKEKLEDKGVTVILTSHDLYEVEYLADRVIIMN-QGKIVAEGSPKELK 227
LI + LED T+++ +H+L E LAD+ +++N + +I A G + LK
Sbjct: 179 --LILKILEDFKGTLVIATHELDVAEKLADKFVLLNLEHRIEAAGGKEILK 227
>pir||F71654 ABC transporter ATP-binding protein (abcT2) RP508 - Rickettsia
prowazekii >gi|3861060|emb|CAA14960.1| (AJ235272) ABC
TRANSPORTER ATP-BINDING PROTEIN (abcT2) [Rickettsia
prowazekii]
Length = 254
Score = 119 bits (296), Expect = 4e-26
Identities = 69/228 (30%), Positives = 123/228 (53%), Gaps = 7/228 (3%)
Query: 1 MPILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPD 60
M L++K+++K + + ++S GE++G+ GPNGAGKTT +I + RPD
Sbjct: 15 MDSLQIKNISKSYKKRN----ILTDISLHIKQGEIVGLFGPNGAGKTTCFNIIIGLMRPD 70
Query: 61 SGEVLVDGIDAVKNPLEVRKR--IAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKH 118
SG++L++ I+ P+ +R R I Y+ QEP + LSV D I K ++
Sbjct: 71 SGQLLLNDINITNLPIYLRARLGIGYLLQEPSIFRGLSVADNIKAVVEISENDKEVIEQK 130
Query: 119 CEDILELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTW 178
++LE F + LS G +RR+++A + + + LDEP AG+DP +
Sbjct: 131 THNLLEKFSIVHLKDLSSASLSGGERRRLEIARSFVIEPKFIMLDEPLAGIDPLAISDIK 190
Query: 179 ELIKEKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKEL 226
+LI L + + +++T H++ + + DR ++ +GK++ EGS +E+
Sbjct: 191 KLI-TYLREFNIGILITDHNVRDTLDIVDRAYVIFEGKVLLEGSAQEI 237
>sp|Q58429|YA23_METJA HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PROTEIN MJ1023
>gi|2127730|pir||F64427 ABC transporter ATP-binding
protein - Methanococcus jannaschii
>gi|1499865|gb|AAB99027.1| (U67545) ABC transporter
ATP-binding protein [Methanococcus jannaschii]
Length = 262
Score = 119 bits (295), Expect = 5e-26
Identities = 84/279 (30%), Positives = 152/279 (54%), Gaps = 26/279 (9%)
Query: 2 PILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDS 61
P ++V+++TK F G+ ++ +SF GE+ G+LG NGAGKTTTLR++A I +
Sbjct: 3 PKIKVENLTKYF----GDKKVLDEISFEVYEGEIFGLLGHNGAGKTTTLRILAGIIEEYT 58
Query: 62 GEVLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCED 121
G V V+G +I Y+ +E L V D + ++ G K + K +
Sbjct: 59 GYVEVNG------------KIGYLPEERGLYRDEKVVDVLKFFGELAGMKKEEIAKSIDY 106
Query: 122 ILELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELI 181
L + + + K +LS G +++VQ ++ + +V LDEP +G+D + R ++I
Sbjct: 107 WLNKLKISNYKYSKIKELSKGNQQKVQFIVSVIHNPDIVILDEPFSGLDVVNVRLLRDII 166
Query: 182 KEKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFGKTVRIVLEEP 241
E L+++G T+IL++H L ++E L DRV+I+ +GK V G +++ + ++ E
Sbjct: 167 FE-LKEEGKTIILSTHQLEKIERLCDRVLILKKGKAVHYGKIEDICR------KMAYIEY 219
Query: 242 IKNFELLKEELLRVKNVKDVRLARDD--SFDVYFKSLDD 278
+ N +L+K+E+ + V ++ +D F+V + SL+D
Sbjct: 220 LDNGKLIKKEIPYEEAVLILKEKAEDVIKFEVRY-SLED 257
>pir||F64557 dipeptide transport ATP-binding protein dppF - Helicobacter pylori
(strain 26695) >gi|2313400|gb|AAD07371.1| (AE000548)
dipeptide ABC transporter, ATP-binding protein (dppF)
[Helicobacter pylori 26695]
Length = 268
Score = 119 bits (295), Expect = 5e-26
Identities = 76/235 (32%), Positives = 127/235 (53%), Gaps = 14/235 (5%)
Query: 1 MPILEVKSVTKKFPT------PKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIA 54
M +LE+K + K + PK + A+N +SF EVL I+G +G GK+TT +++A
Sbjct: 1 MKLLEIKELKKSYAIDRGLFKPKRVIHALNGISFEVEQNEVLSIVGESGCGKSTTAKILA 60
Query: 55 TIYRPDSGEVLVDGIDAV----KNPLEVRKRIAYMTQEP--DLTPPLSVRDYIIYYFRFR 108
I R DSG + +G + ++ + RK++ + Q+P L P V + I
Sbjct: 61 GIERQDSGAIYFNGKRHLHFSKQDWFDYRKKVQMIFQDPYSSLNPRWKVGEIIAEPLLLN 120
Query: 109 G-FSKRDAKKHCEDILELFGLKTH-AHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPT 166
FSK++ K +I++ GLK + P Q S G ++R+ +A AL +V DEP
Sbjct: 121 SHFSKKEIKTKVLEIMQKVGLKLEWIDRYPHQFSGGQRQRIGIARALILHPSVVICDEPV 180
Query: 167 AGVDPRSKRKTWELIKEKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEG 221
+ +D + + L+ + ++ G+T I SHDL VE+++D++I+MNQG+IV G
Sbjct: 181 SALDVSIQAQVLNLLLDLQKEMGLTYIFISHDLGVVEHISDKIIVMNQGQIVETG 235
>pir||A71952 dipeptide transport system ATP-binding protein - Helicobacter
pylori (strain J99) >gi|4154801|gb|AAD05857.1|
(AE001465) DIPEPTIDE TRANSPORT SYSTEM ATP-BINDING
PROTEIN [Helicobacter pylori J99]
Length = 268
Score = 119 bits (295), Expect = 5e-26
Identities = 76/235 (32%), Positives = 127/235 (53%), Gaps = 14/235 (5%)
Query: 1 MPILEVKSVTKKFPT------PKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIA 54
M +LE+K + K + PK + A+N +SF EVL I+G +G GK+TT +++A
Sbjct: 1 MKLLEIKELKKSYAIDRGLFKPKRVIHALNGISFEVEQNEVLSIVGESGCGKSTTAKILA 60
Query: 55 TIYRPDSGEVLVDGIDAV----KNPLEVRKRIAYMTQEP--DLTPPLSVRDYIIYYFRFR 108
I R DSG + +G + ++ + RK++ + Q+P L P V + I
Sbjct: 61 GIERQDSGAIYFNGKRHLHFSKQDWFDYRKKVQMIFQDPYSSLNPRWKVGEIIAEPLLLN 120
Query: 109 G-FSKRDAKKHCEDILELFGLKTH-AHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPT 166
FSK++ K +I++ GLK + P Q S G ++R+ +A AL +V DEP
Sbjct: 121 SHFSKKEIKTKVLEIMQKVGLKLEWIDRYPHQFSGGQRQRIGIARALILHPSVVICDEPV 180
Query: 167 AGVDPRSKRKTWELIKEKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEG 221
+ +D + + L+ + ++ G+T I SHDL VE+++D++I+MNQG+IV G
Sbjct: 181 SALDVSIQAQVLNLLLDLQKEMGLTYIFISHDLGVVEHISDKIIVMNQGQIVETG 235
>pir||H82355 peptide ABC transporter, ATP-binding protein VC0170 [imported] -
Vibrio cholerae (group O1 strain N16961)
>gi|9654573|gb|AAF93346.1| (AE004107) peptide ABC
transporter, ATP-binding protein [Vibrio cholerae]
Length = 571
Score = 119 bits (295), Expect = 5e-26
Identities = 74/241 (30%), Positives = 131/241 (53%), Gaps = 18/241 (7%)
Query: 2 PILEVKSVTKKFPTP-------KGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIA 54
P+L+V++V +F T + V A NNVSF+ + GE G++G +G+GK+T R+IA
Sbjct: 301 PLLKVENVNLRFVTKDSLFESRREYVQASNNVSFAVHEGETFGLVGESGSGKSTIARVIA 360
Query: 55 TIYRPDSGEVLVDGIDAV-------KNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRF 107
+Y+P++G V +GID + PL + ++ + + P + + D I RF
Sbjct: 361 GLYQPNAGRVTFEGIDLTALKSEHERRPLRRQMQMVFQNPYTSMNPRMKIFDIIAEPIRF 420
Query: 108 RGF--SKRDAKKHCEDILELFGL-KTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDE 164
S+ + ++ D+LE GL K K P + S G ++R+ +A AL++ L+ DE
Sbjct: 421 HKLTRSESETRQIVNDLLEHVGLGKMAGLKYPHEFSGGQRQRISIARALATRPRLLICDE 480
Query: 165 PTAGVDPRSKRKTWELIKEKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPK 224
PT+ +D + + L+K+ ++ +T++ SHDL + + DRV +M G ++ E +P
Sbjct: 481 PTSALDVSVQAQILNLLKDLQDELNLTMLFISHDLPVIRQMCDRVGVMQMGTLL-EVAPT 539
Query: 225 E 225
E
Sbjct: 540 E 540
Score = 90.9 bits (222), Expect = 2e-17
Identities = 65/236 (27%), Positives = 119/236 (49%), Gaps = 15/236 (6%)
Query: 1 MPILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPD 60
M +LEVK++ ++P+ G AV +++ GE++G++G +GAGK+T + + P
Sbjct: 1 MSLLEVKNLRIEYPSRHGVHAAVKSLTLDIQRGEIVGVVGESGAGKSTVGNAVIDLLSPP 60
Query: 61 S----GEVLVDGID----AVKNPLEVR-KRIAYMTQEP--DLTPPLSVRDYIIYYFRFR- 108
GEV ++G + + EVR +I ++ Q+P L P +V +
Sbjct: 61 GTIAGGEVYLNGEKISGLSPQAMREVRGSKIGFIFQDPMTSLNPLFTVEHQLTETIHANM 120
Query: 109 GFSKRDAKKHCEDILELFGL---KTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEP 165
S +A + +++ G+ + + P Q S G+++RV +A AL+ + L+ DEP
Sbjct: 121 QVSAEEAYQRALSLMKQVGIPQPENRLKQYPHQFSGGMRQRVVIAIALAGEPDLIIADEP 180
Query: 166 TAGVDPRSKRKTWELIKEKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEG 221
T +D + + LI+E + V +L +HD+ V + DRV +M +G +V G
Sbjct: 181 TTALDVSIQDQILNLIRELCKKNNVGCMLVTHDMGVVSNVTDRVAVMYRGDLVEFG 236
>gb|AAG34388.1|AF197468_4 (AF197468) ATP/GTP binding protein; NosF [Pseudomonas fluorescens]
Length = 305
Score = 119 bits (295), Expect = 5e-26
Identities = 77/231 (33%), Positives = 132/231 (56%), Gaps = 11/231 (4%)
Query: 1 MPILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPD 60
M ++E++ V++++ G+V + + + GEVLG+ G NGAGKTTT+++I + R
Sbjct: 1 MNVVEIEGVSQRY----GDVAVLRGLDLTLAQGEVLGLFGHNGAGKTTTMKLILGLLRAS 56
Query: 61 SGEVLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCE 120
GEV V G A +P VR+ + Y+ + P LS + + ++ R +G A + E
Sbjct: 57 EGEVRVFG-RAPSDP-SVRQMLGYLPENVMFYPQLSGLETLRHFARLKG----AAPEQVE 110
Query: 121 DILELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWEL 180
+LE GL A ++ S G+++R+ LA AL L+ LDEPT G+DP + + ++L
Sbjct: 111 RLLEEVGLAGAARRRVRTYSKGMRQRLGLAQALLGQPRLLLLDEPTVGLDPIATQDLYQL 170
Query: 181 IKEKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFG 231
+ ++L +G ++IL SH L VE +R I+ +G+++A GS L++ G
Sbjct: 171 L-DRLRWQGTSIILCSHVLPGVEAHINRAAILTRGRLLALGSLARLREDAG 220
>gi|10957143 Potential ABC transporter [Lactococcus lactis]
>gi|11346268|pir||T43103 ABC transport protein -
Lactococcus lactis plasmid pMRC01
>gi|3582213|gb|AAC56009.1| (AE001272) Potential ABC
transporter [Lactococcus lactis]
Length = 298
Score = 118 bits (294), Expect = 6e-26
Identities = 83/292 (28%), Positives = 158/292 (53%), Gaps = 19/292 (6%)
Query: 23 VNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSGEVLVDGIDAVKNPLEVRKRI 82
+ NVSF N+ +++G++G NG+GKTT ++ I + + SGE+ + I+ + N + R+
Sbjct: 23 LKNVSFKGNTSQIIGLVGANGSGKTTIMKSILGLIK-FSGEIEISKINILFNNHPILSRV 81
Query: 83 AYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCEDILELFGLKTHAHKKPFQLSTG 142
+ +EP + P L+ R+++ + +G ++A+ +I++ L T +K S G
Sbjct: 82 GSLIEEPGIYPFLTGREHLQCFSILKG---KEAQSDINEIIDQLKLTTFIDEKASSYSLG 138
Query: 143 LKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIKEKLEDKGVTVILTSHDLYEV 202
+K+++ +A AL + LV LDEP G+D +S ++I K +++GVT +++SH L E+
Sbjct: 139 MKQKLAIAIALLNKPILVILDEPMNGLDIQSIHDLRDIIINK-KNQGVTFVISSHLLSEL 197
Query: 203 EYLADRVIIMNQGKIVAEGSPKELKKRFGKTVRIVLEEPIKNFELLK-EELLRVKNVKDV 261
E +AD+++I+ GK + K KK+ + ++ ++ K F+ LK + KN +
Sbjct: 198 EKVADQLVIIKDGKSILNLPFKTFKKK--EIFCLITDQKDKLFKTLKFNNIPYSKNETII 255
Query: 262 RLARDDSFDVYFKSLDDSINGILQVISPQELKIKD-IFTATANFEDVYLEII 312
+ D+S + F L +I +K+K I T + ED +L+ I
Sbjct: 256 NILLDESDEKQF----------LNLIKENNIKLKKFIKKDTKDLEDRFLQFI 297
>pir||B72417 sugar ABC transporter, ATP-binding protein - Thermotoga maritima
(strain MSB8) >gi|4980606|gb|AAD35209.1|AE001697_9
(AE001697) sugar ABC transporter, ATP-binding protein
[Thermotoga maritima]
Length = 520
Score = 118 bits (294), Expect = 6e-26
Identities = 70/231 (30%), Positives = 132/231 (56%), Gaps = 16/231 (6%)
Query: 1 MPILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPD 60
M IL+ K + K+FP V+AV+NV F E++ ++G NGAGK+T ++++ + +PD
Sbjct: 12 MEILKAKGIVKRFPG----VVAVDNVDFEVYENEIVSLIGENGAGKSTLIKILTGVLKPD 67
Query: 61 SGEVLVDGIDA-VKNPLEV-RKRIAYMTQEPDLTPPLSVRDYI-IYYFRFRGFSKRDAKK 117
+GE+LV+G +P++ +K I+ + QE +L ++V + I + Y RG + + +
Sbjct: 68 AGEILVNGERVEFHSPVDAFKKGISVIHQELNLCDNMTVAENIFLAYEAVRGQKRTLSSR 127
Query: 118 --------HCEDILELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGV 169
+++L+L G K L+T ++ V++ AL + ++F+DEPT+ +
Sbjct: 128 VDENYMYTRSKELLDLIGAKFSPDALVRNLTTAQRQMVEICKALVKEPRIIFMDEPTSSL 187
Query: 170 DPRSKRKTWELIKEKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAE 220
+ +E+I E L+ +G++V+ SH L EV ++DR+++M GK + E
Sbjct: 188 TVEETERLFEII-EMLKSRGISVVFVSHRLDEVMRISDRIVVMRDGKRIGE 237
Score = 88.5 bits (216), Expect = 9e-17
Identities = 64/209 (30%), Positives = 114/209 (53%), Gaps = 13/209 (6%)
Query: 23 VNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSGEVLVDGIDA-VKNPLEVRKR 81
V NVSF GEVLG G GAG+T T+ ++ + + +SG++ V+G +KNP + K
Sbjct: 284 VKNVSFEVRKGEVLGFAGLVGAGRTETMLLVFGVNQKESGDIYVNGRKVEIKNPEDAIKM 343
Query: 82 IAYMTQE----PDLTPPLSVRDYIIYYFRFR------GFSKRDAKKHCEDILELFGLKTH 131
+ E L ++V+D I+ + +R ++ ED ++ +KT
Sbjct: 344 GIGLIPEDRKLQGLVLRMTVKDNIVLPSLKKISRWGLVLDERKEEEISEDYVKRLSIKTP 403
Query: 132 A-HKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIKEKLEDKGV 190
+ ++ LS G +++V LA L+++ ++ DEPT G+D +K + +I+E L +G
Sbjct: 404 SIYQITENLSGGNQQKVVLAKWLATNADILIFDEPTRGIDVGAKAEIHRMIRE-LAAQGK 462
Query: 191 TVILTSHDLYEVEYLADRVIIMNQGKIVA 219
VI+ S +L E+ L+DR+++M +G+I A
Sbjct: 463 AVIMISSELPEILNLSDRIVVMWEGEITA 491
>dbj|BAB07364.1| (AP001519) oligopeptide ABC transporter (ATP-binding protein)
[Bacillus halodurans]
Length = 322
Score = 118 bits (294), Expect = 6e-26
Identities = 83/272 (30%), Positives = 143/272 (52%), Gaps = 23/272 (8%)
Query: 2 PILEVKSVTKKFPT-------PKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIA 54
P+LEVK++TK F GEV AV+N+SFS GEVLGI+G +G GK+TT + I
Sbjct: 4 PLLEVKNLTKSFDINGGFFSRKVGEVRAVDNLSFSVYEGEVLGIVGESGCGKSTTGKAIL 63
Query: 55 TIYRPDSGEVLVDGIDAV----------KNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYY 104
+ P SGEV G + + +++ + Y + P T +R+ +I +
Sbjct: 64 RLIEPSSGEVYFAGTEITALSEGDMRKRRRDMQIIFQDPYASLNPRHTIEKIIREPLIVH 123
Query: 105 FRFRGFSKRDAKKHCEDILELFGLKT-HAHKKPFQLSTGLKRRVQLACALSSDVPLVFLD 163
+ +K++ + E++LE GL + HA + P Q S G ++R+ +A AL+ LV D
Sbjct: 124 ---QIGTKKEQLERVEELLETVGLSSDHATRYPHQFSGGQRQRIGIARALAVHPKLVICD 180
Query: 164 EPTAGVDPRSKRKTWELIKEKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSP 223
EP + +D + + L+ + E +T I +HDL V++++DRV +M G++V +
Sbjct: 181 EPVSALDVSVQSQILNLMADLKETFALTYIFIAHDLSVVKHISDRVAVMYLGRMVEMATK 240
Query: 224 KEL--KKRFGKTVRIVLEEPIKNFELLKEELL 253
+L + T ++ P+ + + KE++L
Sbjct: 241 DQLFENPKHPYTRALLSAVPVPDPDAAKEKIL 272
>pir||G69192 ABC transporter (glutamine transport ATP-binding protein) -
Methanobacterium thermoautotrophicum (strain Delta H)
>gi|2621782|gb|AAB85201.1| (AE000849) ABC transporter
(glutamine transport ATP-binding protein)
[Methanobacterium thermoautotrophicum]
Length = 220
Score = 118 bits (293), Expect = 8e-26
Identities = 74/225 (32%), Positives = 127/225 (55%), Gaps = 10/225 (4%)
Query: 1 MPILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPD 60
M +EV+ + K F + G + A+N V+ + GE + I+GP+G+GK+T L MI + PD
Sbjct: 1 MKAIEVRDLRKSFDS--GRIRALNGVNLEVDGGEFISIMGPSGSGKSTLLNMIGALDVPD 58
Query: 61 SGEVLVDGIDAVKNPLEVRKR---IAYMTQEPDLTPPLSVRDYI-IYYFRFRGFSKRDAK 116
SG + V G D + R R I ++ Q +L P L+ + + I F + + +
Sbjct: 59 SGTICVAGRDLSRERDLSRLRAEEIGFVFQLHNLIPNLTALENVEIPMFAVK---HENME 115
Query: 117 KHCEDILELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRK 176
+ ++LE L AH+KP +LS G ++RV +A AL++D ++ DEPT +D R+ ++
Sbjct: 116 ERAMELLEYVDLADKAHRKPTELSGGERQRVAIARALANDPSIILADEPTGSLDSRTSQR 175
Query: 177 TWELIKEKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEG 221
++E ED+GVT+++ +H+ +V +A R I + G IV +G
Sbjct: 176 VLRKLRELQEDEGVTLVVVTHE-PDVAAMASRTIRILDGVIVDDG 219
>gb|AAD09159.1| (AF047429) putative ATP/GTP binding protein NosF [Achromobacter
cycloclastes] >gi|4127274|emb|CAA75427.1| (Y15161)
cytoplasmic protein [Achromobacter cycloclastes]
Length = 299
Score = 118 bits (293), Expect = 8e-26
Identities = 77/228 (33%), Positives = 129/228 (55%), Gaps = 11/228 (4%)
Query: 2 PILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDS 61
P L + +TK+F + V A+ +VS + G +LG NGAGK+T ++++ + DS
Sbjct: 3 PTLTISRLTKRFQS----VEALKSVSLALEPGRRAALLGHNGAGKSTMMKIVLGLIPFDS 58
Query: 62 GEVLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCED 121
GEV V G A +P R ++AY+ + P L+ + + +Y RG + K +
Sbjct: 59 GEVSVCG-SAPGSPA-ARTQVAYLPENVAFHPALTGEEQLRHYLALRG----ENPKQATE 112
Query: 122 ILELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELI 181
+L GL A ++ S G+++RV LA L L+ LDEPT+G+DP S+R ++L+
Sbjct: 113 LLARVGLGHAARRRIGTYSKGMRQRVGLAQTLIGRPRLLVLDEPTSGLDPVSRRDFYDLL 172
Query: 182 KEKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKR 229
+ L +G ++L+SH L EVE D ++I++ G++VAEG+ +L+ R
Sbjct: 173 -DGLAAEGTAILLSSHVLTEVEARTDSILILSGGELVAEGTLADLRTR 219
>gb|AAK43169.1| Arabinose ABC transporter, ATP-binding protein [Sulfolobus
solfataricus]
Length = 371
Score = 118 bits (292), Expect = 1e-25
Identities = 72/231 (31%), Positives = 126/231 (54%), Gaps = 6/231 (2%)
Query: 1 MPILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPD 60
M + V++++K F K EV AV+NVS + +SG G+LGP+G GKTT LR+IA + P
Sbjct: 1 MTTIRVENLSKIFKKGKTEVKAVDNVSITIDSGMAFGVLGPSGHGKTTFLRLIAGLEEPT 60
Query: 61 SGEVLVDGIDAVKNPLEV-----RKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDA 115
SG + D +AV +P V ++ IA + Q L P ++V D I + + K
Sbjct: 61 SGYIYFDN-EAVSSPRRVMMSPEKRGIAMVFQNWALYPNMTVFDNIAFPLKLAKVPKDKI 119
Query: 116 KKHCEDILELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKR 175
+ +++ E GL ++ P +LS G +R +A AL D ++ LDEP + +D + +
Sbjct: 120 ENKVKEVSEELGLSGVLNRYPKELSGGQMQRTAIARALVKDPKVLLLDEPFSNLDAQIRE 179
Query: 176 KTWELIKEKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKEL 226
L+++ ++ +T ++ SHD ++ +A++ ++ GK G+P E+
Sbjct: 180 SARALVRKIQRERKLTTLIVSHDPADIFAIANKAGVIVNGKFAQIGTPTEI 230
>pir||A75208 sugar transport ATP-binding protein. PAB2232 - Pyrococcus abyssi
(strain Orsay) >gi|5457621|emb|CAB49112.1| (AJ248283)
SUGAR TRANSPORT ATP-BINDING PROTEIN. [Pyrococcus abyssi]
Length = 362
Score = 118 bits (292), Expect = 1e-25
Identities = 89/321 (27%), Positives = 155/321 (47%), Gaps = 28/321 (8%)
Query: 4 LEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSGE 63
+ ++++ KKF G IA++N++ GE + +LGP+G+GK+T L +A IY+P SG
Sbjct: 4 IRLENIVKKF----GNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGR 59
Query: 64 VLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCEDIL 123
+ D D + P + R I + Q L P ++V I + R K + + +
Sbjct: 60 IYFDERDVTELPPKDRN-IGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRKVA 118
Query: 124 ELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIKE 183
++ ++ + P+QLS G ++RV +A AL + ++ LDEP + +D + + +K
Sbjct: 119 KMLHIEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKR 178
Query: 184 KLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKEL-KKRFGKTVRIVLEEPI 242
++ G+T I +HD E +ADR+ ++ +GKI+ G+P E+ K K V L P
Sbjct: 179 LQKELGITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFLGNPP 238
Query: 243 KNFE---------LLKE-----------ELLRVKNVKDVRLARDDSFDVYFKSLDDSING 282
NF L+ E +++ NVKDV + K + + I G
Sbjct: 239 MNFVEARVEDGKLLISENNYIPVPKQYRQIIERLNVKDVIIGFRPHDAEVIKGISEGIVG 298
Query: 283 ILQVISPQELKIKDIFTATAN 303
+V S + L + I T + N
Sbjct: 299 --EVYSFEPLGREQIVTVSVN 317
>emb|CAB61861.1| (AL133252) putative ABC-transporter ATP binding protein
[Streptomyces coelicolor A3(2)]
Length = 354
Score = 118 bits (292), Expect = 1e-25
Identities = 71/228 (31%), Positives = 122/228 (53%), Gaps = 3/228 (1%)
Query: 2 PILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDS 61
P L ++ +T +P + V+ + + G +L +LGP+G GKTTT+++ + + P
Sbjct: 10 PGLRLEQITVTYPGHREPVL--DGLDLDVADGRLLALLGPSGCGKTTTVQVASGLLTPGR 67
Query: 62 GEVLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCED 121
G V + G + + P E R A + Q+P L P + D + + R RG S+RDA+
Sbjct: 68 GAVHLRGTEVTRVPPEHRGA-AVVFQQPMLLPHRTALDNVAFPARMRGRSRRDARTSALA 126
Query: 122 ILELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELI 181
LE GL A + P QLS G +RV LA AL+++ ++ LDEP + +DP + +L+
Sbjct: 127 HLERVGLGALAARYPRQLSGGQAQRVALARALAAEPAVLLLDEPFSALDPSLRHTMRDLL 186
Query: 182 KEKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKR 229
+ VT +L +HD E +AD + ++++G ++ + P +L R
Sbjct: 187 TTVQRELAVTTVLVTHDQTEAASVADTIALLDRGGLLQQAQPADLYAR 234
>gb|AAK41416.1| Sugar ABC transporter [Sulfolobus solfataricus]
Length = 368
Score = 117 bits (291), Expect = 1e-25
Identities = 70/229 (30%), Positives = 121/229 (52%), Gaps = 1/229 (0%)
Query: 1 MPILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPD 60
M ++++++ K++ K +V + ++ GE + ILGP+G GKTT L++IA + R D
Sbjct: 2 MSYVKLENIWKEYEEKKRKVQVLRGLNLEIEKGEFVVILGPSGEGKTTILKIIAGLLRQD 61
Query: 61 SGEVLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCE 120
G V + G + V + +R+A + Q + P +SV D I + + SK + KK
Sbjct: 62 KGHVYLRG-EVVDDLPPKDRRVAMVPQNYAIYPFMSVYDNIAFPLKVMHLSKDEIKKRVL 120
Query: 121 DILELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWEL 180
++ + + +KP QLS G +RV +A AL ++ +DEP + +D + + E
Sbjct: 121 EVARMLRIDNLLERKPSQLSGGQMQRVAIARALVKGADIILMDEPLSNLDAQVRVVAREE 180
Query: 181 IKEKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKR 229
+K+ D T+I +HD E LA +V I++ G + A G P E+ KR
Sbjct: 181 LKQLQRDLKPTIIYVTHDQVEALSLATKVAILHDGVVQAYGDPMEIYKR 229
>pir||H72356 amino acid ABC transporter, ATP-binding protein - Thermotoga
maritima (strain MSB8)
>gi|4981110|gb|AAD35676.1|AE001734_3 (AE001734) amino
acid ABC transporter, ATP-binding protein [Thermotoga
maritima]
Length = 242
Score = 116 bits (289), Expect = 2e-25
Identities = 68/228 (29%), Positives = 129/228 (55%), Gaps = 7/228 (3%)
Query: 1 MPILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPD 60
M +L+++ + K F G++ + + GEV+ I+GP+G+GK+T LR I +
Sbjct: 1 MTVLKIEDLHKYF----GKLYVLRGIDLEVKKGEVISIIGPSGSGKSTLLRCINLLEEYQ 56
Query: 61 SGEVLVDG-IDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYI-IYYFRFRGFSKRDAKKH 118
G++ G + +N +R I + Q+ +L P LSV + + + + + K +A +
Sbjct: 57 RGKIYFKGELITHRNINRIRSSIGMVFQQFNLFPHLSVLNNLTLAPMKVKNMQKDEAVEK 116
Query: 119 CEDILELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTW 178
+ +LE GL ++KP LS G ++RV +A AL D L+ DEPT+ +DP ++
Sbjct: 117 AKKLLERVGLIEKINEKPGNLSGGQQQRVAIARALMMDPELMLFDEPTSALDPELVKEVL 176
Query: 179 ELIKEKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKEL 226
++IK+ L G+T+++ +H++ ++DRV+ M++G+IV G P+++
Sbjct: 177 DVIKD-LAQSGMTMLIVTHEMRFARDVSDRVVFMDEGRIVEMGPPEKI 223
>pir||B72097 dipeptide transporter ATPase - Chlamydophila pneumoniae (strain
CWL029) >gi|4376554|gb|AAD18429.1| (AE001613) Dipeptide
Transporter ATPase [Chlamydophila pneumoniae CWL029]
>gi|8163441|gb|AAF73675.1| (AE002208) ABC transporter,
ATP-binding protein [Chlamydophila pneumoniae AR39]
>gi|8978654|dbj|BAA98490.1| (AP002546) dipeptide
transporter ATPase [Chlamydophila pneumoniae J138]
Length = 341
Score = 116 bits (288), Expect = 3e-25
Identities = 76/235 (32%), Positives = 124/235 (52%), Gaps = 17/235 (7%)
Query: 2 PILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDS 61
PI+ V+ V+KK G+ I ++ VSFS GEV GI+G +G+GKTT LR + + P S
Sbjct: 7 PIISVQDVSKKL----GDHILLSKVSFSVYPGEVFGIVGHSGSGKTTLLRCLDFLDMPTS 62
Query: 62 GEVLVDGIDAVKNPLEVRK--------RIAYMTQEPDLTPPLSVRDYIIYYFRFRG--FS 111
G + V G D N L +K ++AY++Q L +V + I Y R S
Sbjct: 63 GSISVAGFD---NSLPTQKFSRRNFSKKVAYISQNYGLFSSKTVFENIAYPLRIHHSEMS 119
Query: 112 KRDAKKHCEDILELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDP 171
K + ++ D L L P LS G K++V +A A+ +V DE T+ +DP
Sbjct: 120 KSEVEEQVYDTLNFLNLYHRHDAYPGNLSGGQKQKVAIARAIVCQPEVVLCDEITSALDP 179
Query: 172 RSKRKTWELIKEKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKEL 226
+S E + + +++G+T++L SH++ V+ + V++M+QG + G+ +EL
Sbjct: 180 KSTENIIERLLQLNQERGITLVLVSHEIDVVKKICSHVLVMHQGAVEELGTTEEL 234
>pir||E75444 branched-chain amino acid ABC transporter, ATP-binding protein -
Deinococcus radiodurans (strain R1)
>gi|6458765|gb|AAF10609.1|AE001955_1 (AE001955)
branched-chain amino acid ABC transporter, ATP-binding
protein [Deinococcus radiodurans]
Length = 279
Score = 116 bits (288), Expect = 3e-25
Identities = 75/244 (30%), Positives = 128/244 (51%), Gaps = 23/244 (9%)
Query: 2 PILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDS 61
P+L+V+ +TK F G + AVN+V+F ++ ++GPNGAGKTT +I IY PD
Sbjct: 17 PLLDVQHLTKSF----GGLTAVNDVTFQVPERRIISVIGPNGAGKTTFFNLITGIYAPDR 72
Query: 62 GEVLVDG-----------IDA-VKNPLEVRKRIAYMTQEPDLTPPLSVR------DYIIY 103
G V + G ++A + + + MT E ++ VR D +++
Sbjct: 73 GTVNLAGRSLVGLRPDQVVEAGISRTFQNIRLFPSMTAEENIMLGRGVRLRGGFWDSVLH 132
Query: 104 YFRFRGFSKRDAKKHCEDILELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLD 163
RF+ + +A+ +L+ GL + L G +R++++A AL++ L+ LD
Sbjct: 133 TARFQK-DEEEARNTARLMLDFVGLSKWRGELSTNLPYGDQRKLEIARALATTPKLILLD 191
Query: 164 EPTAGVDPRSKRKTWELIKEKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSP 223
EP AG++PR LI+ ++ GVTV+L HD+ V L++ + ++N G +AEG P
Sbjct: 192 EPAAGMNPRETEDLKALIRAIRDELGVTVVLIEHDMRLVMTLSENITVLNYGSKLAEGLP 251
Query: 224 KELK 227
E++
Sbjct: 252 HEIR 255
>emb|CAB69805.1| (AJ243712) putative ABC-transporter [Bacillus cereus]
Length = 258
Score = 116 bits (288), Expect = 3e-25
Identities = 85/270 (31%), Positives = 143/270 (52%), Gaps = 23/270 (8%)
Query: 46 KTTTLRMIATIYRPDSGEVLVDGIDAVKNPL--EVRKRIAYMTQEPDLTPPLSVRDYIIY 103
KTTT+ M+ + P G+V + G K+P +VR + M QE + ++V + I
Sbjct: 1 KTTTMSMMLGLKDPTEGKVFIFG----KSPKHRDVRNSLGAMLQEVSVIDSITVEEAIEL 56
Query: 104 YFRFRGFSKRDAKKHCEDILELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLD 163
FR + E +L+L L++ ++ +LS G KRR+ A AL+ + L+FLD
Sbjct: 57 ---FRSYYTNPIA--IETLLQLSNLESERKQRCEKLSGGQKRRLNFALALAGNPDLLFLD 111
Query: 164 EPTAGVDPRSKRKTWELIKEKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSP 223
EPT G+D S+R WE I+ KL +G T+ILT+H L E + LA+R+++ GKI+A+G+P
Sbjct: 112 EPTVGMDITSRRMFWETIR-KLASEGKTIILTTHYLEEADALANRILLFANGKIIADGTP 170
Query: 224 KELKKRFG-KTVRIVLEEPIKNFELLKEELLRVKNVKDVRLARDDSFDVYFKSLDDSING 282
E+K KT+ +E I +LLKE + NV +V+ S + F + +
Sbjct: 171 DEMKATISRKTITFYSKESIPT-KLLKE----LPNVTEVK-----SSEGRFILTTEDTDA 220
Query: 283 ILQVISPQELKIKDIFTATANFEDVYLEII 312
L+ I + L + D+ + ++ + + +
Sbjct: 221 TLKAIYQKSLPVTDVSVKRGSLDEAFEQFV 250
>pir||G81344 ABC transport system ATP-binding protein Cj0732 [imported] -
Campylobacter jejuni (strain NCTC 11168)
>gi|6968189|emb|CAB73006.1| (AL139076) ABC transport
system ATP-binding protein [Campylobacter jejuni]
Length = 329
Score = 116 bits (288), Expect = 3e-25
Identities = 73/227 (32%), Positives = 126/227 (55%), Gaps = 7/227 (3%)
Query: 1 MPILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPD 60
M L++K+ K + G+ I +++FSA GE + +LGP+G GK+T LR IA + + +
Sbjct: 1 MAYLKIKNFKKAY----GDKIIFEDINFSAKKGEFITLLGPSGCGKSTLLRCIAGLSQIN 56
Query: 61 SGEVLVDGIDAVKNPLEVRKR-IAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHC 119
G++ ++ D K L +KR I + Q L P L+V + + + + + K+D +K
Sbjct: 57 GGKISLNDKDLTK--LSPQKRNIGMVFQNYALFPNLNVFENVAFGLKIKKMDKKDIEKRV 114
Query: 120 EDILELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWE 179
+ +L+L L+ +A P +LS G +RV LA +L L+ LDEP + +D + ++
Sbjct: 115 KKMLKLVELEEYAKTYPHKLSGGQMQRVALARSLVIKPDLLLLDEPLSALDAKIRKYLRV 174
Query: 180 LIKEKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKEL 226
IKE ++ +T I +HD E L+D +I+MN+GKI+ + L
Sbjct: 175 QIKEIQKELELTTIFVTHDQEEALELSDTIILMNEGKIIQNSNANNL 221
>emb|CAC11277.1| (AL445063) probable trehalose/maltose transport ATP-hydrolyzing
subunit MalK [Thermoplasma acidophilum]
Length = 371
Score = 116 bits (287), Expect = 4e-25
Identities = 68/228 (29%), Positives = 126/228 (54%), Gaps = 3/228 (1%)
Query: 1 MPILEVKSVTKKFP--TPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYR 58
M ++ ++ VT+ F +P G V +++ + N+GE ILGP+G+GK+T LR+IA + +
Sbjct: 1 MTVVRLEHVTRDFGKNSPNGPHTGVFDINLTINNGEFFVILGPSGSGKSTMLRIIAGLEK 60
Query: 59 PDSGEVLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKH 118
DSG + +D + P + R +A + Q L P ++V D I + + + SK++ +
Sbjct: 61 VDSGHIFLDEYEITDFPPKDRD-MAMVFQNYALYPFMTVYDNIAFPLKIQKISKQEIDER 119
Query: 119 CEDILELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTW 178
++ +L ++ + KP Q+S G ++RV L A+ + +DEP + +D + +
Sbjct: 120 VREVAKLLDIEGILNMKPGQISGGQRQRVALGRAIIRRPAVFLMDEPLSNLDAKLRGTMR 179
Query: 179 ELIKEKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKEL 226
+K+ E G+T I +HD E LADRV ++N+G ++ G P ++
Sbjct: 180 VELKKLHEQLGITTIYVTHDQIEAMTLADRVGVINRGNLIQVGGPMDV 227
>pir||C82526 ABC transporter ATP-binding protein XF2695 [imported] - Xylella
fastidiosa (strain 9a5c)
>gi|9107936|gb|AAF85492.1|AE004075_7 (AE004075) ABC
transporter ATP-binding protein [Xylella fastidiosa]
Length = 228
Score = 115 bits (285), Expect = 7e-25
Identities = 75/231 (32%), Positives = 128/231 (54%), Gaps = 10/231 (4%)
Query: 1 MPILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPD 60
M +L +V+K++P +A+++VSFS GE+L + G +GAGK+T L++I RP
Sbjct: 1 MSVLSFDNVSKQYPDGH---LALDDVSFSVAEGEMLFVTGHSGAGKSTLLKLIQLDERPT 57
Query: 61 SGEVLVDGIDAV-----KNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDA 115
GEVL D ++ + + P R+++ + QE L SV D + RG + +
Sbjct: 58 YGEVLFDDLNLLNVRGRQIPFH-RRQVGAVYQEHRLLMDYSVGDNVALPLVLRGIPRAEI 116
Query: 116 KKHCEDILELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKR 175
K +LE L + P +LS G ++RV +A A+ S+ L+ DEPT +DP
Sbjct: 117 GKQVCSVLERVSLAHRSRALPSELSAGEQQRVGIARAIISEPRLLVADEPTGNLDPTLAE 176
Query: 176 KTWELIKEKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKEL 226
+ +L E L +G +V++ SHDL ++ + RV+I++ G++V + SP++L
Sbjct: 177 EIMQLFVE-LPARGTSVLVVSHDLALLKKMRKRVLILDHGRLVDDISPQDL 226
>sp|P55339|ECSA_BACSU ABC-TYPE TRANSPORTER ATP-BINDING PROTEIN ECSA
>gi|7445744|pir||F69619 ABC transporter (ATP-binding
protein) ecsA - Bacillus subtilis
>gi|1177253|emb|CAA61074.1| (X87807) putative
ATP-binding protein of ABC-type [Bacillus subtilis]
>gi|2226115|emb|CAA74409.1| (Y14077) Hypothetical
protein [Bacillus subtilis] >gi|2633340|emb|CAB12844.1|
(Z99109) ABC transporter (ATP-binding protein) [Bacillus
subtilis]
Length = 247
Score = 114 bits (283), Expect = 1e-24
Identities = 66/231 (28%), Positives = 121/231 (51%), Gaps = 5/231 (2%)
Query: 1 MPILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPD 60
M +L VK +T + + NVSF+ +++G++G NGAGK+TT+R I + P
Sbjct: 1 MSLLSVKDLTGGYTRNP----VLKNVSFTLEPNQIVGLIGLNGAGKSTTIRHIIGLMDPH 56
Query: 61 SGEVLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCE 120
G + ++G ++P R + Y+ + P L L++ +++ G SK +K
Sbjct: 57 KGSIELNGKTFAEDPEGYRSQFTYIPETPVLYEELTLMEHLELTAMAYGLSKETMEKRLP 116
Query: 121 DILELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWEL 180
+L+ F ++ P S G+K++V + CA ++ L +DEP G+DP + E
Sbjct: 117 PLLKEFRMEKRLKWFPAHFSKGMKQKVMIMCAFLAEPALYIIDEPFLGLDPLAINALLER 176
Query: 181 IKEKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFG 231
+ E + G +V++++H L E D II++ G++ A G+ EL+++FG
Sbjct: 177 MNE-AKKGGASVLMSTHILATAERYCDSFIILHNGEVRARGTLSELREQFG 226
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.319 0.139 0.389
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 116469572
Number of Sequences: 2977
Number of extensions: 5017457
Number of successful extensions: 24593
Number of sequences better than 1.0e-10: 2128
Number of HSP's better than 0.0 without gapping: 342
Number of HSP's successfully gapped in prelim test: 1786
Number of HSP's that attempted gapping in prelim test: 20573
Number of HSP's gapped (non-prelim): 2625
length of query: 314
length of database: 189,106,746
effective HSP length: 57
effective length of query: 257
effective length of database: 154,992,987
effective search space: 39833197659
effective search space used: 39833197659
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 165 (68.7 bits)