BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB1707 (PAB1707) DE:PRISMANE PROTEIN HOMOLOG.
(446 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||E75075 hybrid cluster [4Fe-2S-3O] protein PAB1707 [similari... 915 0.0
sp|Q9X0Q4|PRIS_THEMA PRISMANE PROTEIN HOMOLOG (HYBRID-CLUSTER PR... 471 e-132
pir||A59199 hybrid cluster [4Fe-2S-3O] protein MTH1453 [similari... 446 e-124
sp|O27502|PRIS_METTH PRISMANE PROTEIN HOMOLOG (HYBRID-CLUSTER PR... 446 e-124
pir||E69060 hybrid cluster [4Fe-2S-3O] protein - Methanobacteriu... 446 e-124
pir||E64395 hybrid cluster [4Fe-2S-3O] protein MJ0765 [similarit... 339 3e-92
sp|Q58175|PRIS_METJA PRISMANE PROTEIN HOMOLOG (HYBRID-CLUSTER PR... 339 3e-92
gb|AAC73960.1| (AE000189) putative prismane [Escherichia coli K12] 337 2e-91
dbj|BAA35587.1| (D90724) Prismane [6Fe-6S] protein [Escherichia ... 337 2e-91
sp|P75825|PRIS_ECOLI PRISMANE PROTEIN HOMOLOG (HYBRID-CLUSTER PR... 337 2e-91
sp|P96095|PRIS_THIFE PRISMANE PROTEIN HOMOLOG (HYBRID-CLUSTER PR... 328 6e-89
pdb|1E1D|A Chain A, Hybrid Cluster Protein From Desulfovibrio Vu... 323 2e-87
sp|P31101|PRIS_DESVH PRISMANE PROTEIN (HYBRID-CLUSTER PROTEIN) (... 323 3e-87
sp|Q01770|PRIS_DESDE PRISMANE PROTEIN (HYBRID-CLUSTER PROTEIN) (... 312 5e-84
>pir||E75075 hybrid cluster [4Fe-2S-3O] protein PAB1707 [similarity] -
Pyrococcus abyssi (strain Orsay)
>gi|5458418|emb|CAB49906.1| (AJ248286) PRISMANE PROTEIN
HOMOLOG. [Pyrococcus abyssi]
Length = 446
Score = 915 bits (2340), Expect = 0.0
Identities = 446/446 (100%), Positives = 446/446 (100%)
Query: 1 MLCNQCSMSLSGGCTVRGVCGKDPDLNSLQDALIYGIKGTAAYYYHALEMGYDNPEIGHF 60
MLCNQCSMSLSGGCTVRGVCGKDPDLNSLQDALIYGIKGTAAYYYHALEMGYDNPEIGHF
Sbjct: 1 MLCNQCSMSLSGGCTVRGVCGKDPDLNSLQDALIYGIKGTAAYYYHALEMGYDNPEIGHF 60
Query: 61 LAEALYSTLTNVNFDKNRFIDLILENGRIHLEAMKLLDKAYTETFGLPKPVEVPTGTTEG 120
LAEALYSTLTNVNFDKNRFIDLILENGRIHLEAMKLLDKAYTETFGLPKPVEVPTGTTEG
Sbjct: 61 LAEALYSTLTNVNFDKNRFIDLILENGRIHLEAMKLLDKAYTETFGLPKPVEVPTGTTEG 120
Query: 121 HGIVVTGHSYKALYELLNQIREMGLEEEIKVYTHSEMLPAHSYPEIRKFKSLYGNWGGSW 180
HGIVVTGHSYKALYELLNQIREMGLEEEIKVYTHSEMLPAHSYPEIRKFKSLYGNWGGSW
Sbjct: 121 HGIVVTGHSYKALYELLNQIREMGLEEEIKVYTHSEMLPAHSYPEIRKFKSLYGNWGGSW 180
Query: 181 VYQRKEFAEFPGVIIGTSNCVQQPTKAYQDRIFTVGIAGLEGVPHLEDYDFEPAIKRALE 240
VYQRKEFAEFPGVIIGTSNCVQQPTKAYQDRIFTVGIAGLEGVPHLEDYDFEPAIKRALE
Sbjct: 181 VYQRKEFAEFPGVIIGTSNCVQQPTKAYQDRIFTVGIAGLEGVPHLEDYDFEPAIKRALE 240
Query: 241 TPKMGKREGEKIVTGFHHTYILAMKDKLIELINEGKIRHIFVIGGCDVPNPKMSYYEKLT 300
TPKMGKREGEKIVTGFHHTYILAMKDKLIELINEGKIRHIFVIGGCDVPNPKMSYYEKLT
Sbjct: 241 TPKMGKREGEKIVTGFHHTYILAMKDKLIELINEGKIRHIFVIGGCDVPNPKMSYYEKLT 300
Query: 301 ELVPRDAIILSAACGKFRYNRRDYGSIEGIPRFMDFGQCNNVYSIIEIALALAKELDMDI 360
ELVPRDAIILSAACGKFRYNRRDYGSIEGIPRFMDFGQCNNVYSIIEIALALAKELDMDI
Sbjct: 301 ELVPRDAIILSAACGKFRYNRRDYGSIEGIPRFMDFGQCNNVYSIIEIALALAKELDMDI 360
Query: 361 NSLPVSIVLSWMEQKAIGILYTLLYLGVKGIYIGPKSPEFLTPRVFEILRKQFDLRLISE 420
NSLPVSIVLSWMEQKAIGILYTLLYLGVKGIYIGPKSPEFLTPRVFEILRKQFDLRLISE
Sbjct: 361 NSLPVSIVLSWMEQKAIGILYTLLYLGVKGIYIGPKSPEFLTPRVFEILRKQFDLRLISE 420
Query: 421 PEKDLREMLSKGISLEESAPLAEELD 446
PEKDLREMLSKGISLEESAPLAEELD
Sbjct: 421 PEKDLREMLSKGISLEESAPLAEELD 446
>sp|Q9X0Q4|PRIS_THEMA PRISMANE PROTEIN HOMOLOG (HYBRID-CLUSTER PROTEIN) (HCP)
>gi|7430816|pir||G72285 hybrid cluster [4Fe-2S-3O]
protein TM1172 [similarity] - Thermotoga maritima
(strain MSB8) >gi|4981721|gb|AAD36247.1|AE001774_4
(AE001774) prismane protein [Thermotoga maritima]
Length = 431
Score = 471 bits (1200), Expect = e-132
Identities = 224/431 (51%), Positives = 308/431 (70%), Gaps = 6/431 (1%)
Query: 1 MLCNQCSMSLSG-GCTVRGVCGKDPDLNSLQDALIYGIKGTAAYYYHALEMGYDNPEIGH 59
M C QCS + +G GCT GVCGK P + LQD L++ IKG +AYYYHA E+GYD+PEI
Sbjct: 3 MFCYQCSQTANGTGCTEYGVCGKSPTVARLQDNLVFAIKGISAYYYHARELGYDDPEIAG 62
Query: 60 FLAEALYSTLTNVNFDKNRFIDLILENGRIHLEAMKLLDKAYTETFGLPKPVEVPTGTTE 119
FL EALYSTLTNVNFD F++ LE GR++L+AM+LL KA+ ET+G P PVEV TGT +
Sbjct: 63 FLDEALYSTLTNVNFDAQSFVEYALEAGRMNLKAMQLLKKAHIETYGEPTPVEVETGTKK 122
Query: 120 GHGIVVTGHSYKALYELLNQIREMGLEEEIKVYTHSEMLPAHSYPEIRKFKSLYGNWGGS 179
G GI+VTGH+ KAL ELL Q+ + VYTHSEMLPAH YP +RK+K+L GN G +
Sbjct: 123 GKGIIVTGHNLKALEELLKQVEGTN----VYVYTHSEMLPAHGYPGLRKYKNLIGNLGKA 178
Query: 180 WVYQRKEFAEFPGVIIGTSNCVQQPTKAYQDRIFTVGIAGLEGVPHLEDYDFEPAIKRAL 239
W QRK FAE+P I+GTSNCV P+++Y+DR+FT IA L GV H++ YD+ I++A
Sbjct: 179 WYDQRKLFAEYPVAILGTSNCVLIPSESYRDRMFTTSIARLPGVKHIDGYDYTEVIEKAK 238
Query: 240 ETPKMGKREGE-KIVTGFHHTYILAMKDKLIELINEGKIRHIFVIGGCDVPNPKMSYYEK 298
P + ++ G K+ TGF + ++++ DK+ EL+ GKI+H V+GGCDVP + YY +
Sbjct: 239 SLPDLEEKPGSYKLRTGFSTSVVVSLADKIKELVEAGKIKHFLVVGGCDVPFKRNEYYRE 298
Query: 299 LTELVPRDAIILSAACGKFRYNRRDYGSIEGIPRFMDFGQCNNVYSIIEIALALAKELDM 358
+ +P++ ++++ ACGKFR N D G I+GIPR +D GQCN+ IEIA ALAK +
Sbjct: 299 FVQKLPKETVVITLACGKFRINDLDLGDIDGIPRLIDVGQCNDTIVAIEIAQALAKVFGV 358
Query: 359 DINSLPVSIVLSWMEQKAIGILYTLLYLGVKGIYIGPKSPEFLTPRVFEILRKQFDLRLI 418
++ LP+++VL+WMEQKA+ IL+TLL LG+K IY+GP P ++ + ++L +F L+ I
Sbjct: 359 EVTELPLTLVLTWMEQKAVAILWTLLALGLKNIYVGPVLPAWVNEDILKVLTAEFGLKTI 418
Query: 419 SEPEKDLREML 429
SEPEKD++E+L
Sbjct: 419 SEPEKDIKEIL 429
>pir||A59199 hybrid cluster [4Fe-2S-3O] protein MTH1453 [similarity] -
Methanobacterium thermoautotrophicum (strain Delta H)
Length = 491
Score = 446 bits (1135), Expect = e-124
Identities = 212/430 (49%), Positives = 284/430 (65%), Gaps = 5/430 (1%)
Query: 1 MLCNQCSMSLSG-GCTVRGVCGKDPDLNSLQDALIYGIKGTAAYYYHALEMGYDNPEIGH 59
M C QCS ++ G CT+RGVCGK+P + LQD L++ IKG +AY YHA E+GY + E+
Sbjct: 65 MFCYQCSQTVRGRACTIRGVCGKEPTVARLQDNLLFAIKGISAYLYHARELGYTDEEVDA 124
Query: 60 FLAEALYSTLTNVNFDKNRFIDLILENGRIHLEAMKLLDKAYTETFGLPKPVEVPTGTTE 119
FL YSTLTNVNFD FIDL LE G +++ MKLL KA+ +T+G P+P EV G E
Sbjct: 125 FLERGFYSTLTNVNFDAGEFIDLALEAGEMNIRTMKLLKKAHIDTYGEPEPTEVRVGALE 184
Query: 120 GHGIVVTGHSYKALYELLNQIREMGLEEEIKVYTHSEMLPAHSYPEIRKFKSLYGNWGGS 179
G I+ TGHS +AL ELL Q G I VYTHSE+LPAH YP +RK+ L G GG
Sbjct: 185 GPAIIATGHSLRALEELLKQTEGTG----INVYTHSELLPAHGYPGLRKYPHLAGQLGGP 240
Query: 180 WVYQRKEFAEFPGVIIGTSNCVQQPTKAYQDRIFTVGIAGLEGVPHLEDYDFEPAIKRAL 239
W Q+ F+ + I+GTSNCV P Y+DR+FT G+A L GV HLE YDF P I +AL
Sbjct: 241 WFDQKDTFSRYTAAILGTSNCVLLPRDDYRDRMFTCGVAALPGVEHLEGYDFSPLIDKAL 300
Query: 240 ETPKMGKREGEKIVTGFHHTYILAMKDKLIELINEGKIRHIFVIGGCDVPNPKMSYYEKL 299
E P + + + + TGF + IL++ DK+ EL+ +GKIR F++GGCD P P+ YY +
Sbjct: 301 ELPPLSEEDATTLTTGFGLSTILSLADKIRELVEDGKIRRFFLVGGCDSPLPRAKYYTEF 360
Query: 300 TELVPRDAIILSAACGKFRYNRRDYGSIEGIPRFMDFGQCNNVYSIIEIALALAKELDMD 359
+P D ++L+ ACGK+R+N D G IEG+PR +D GQCN+ +E+ AL+ MD
Sbjct: 361 VRKLPEDTVVLTLACGKYRFNSMDLGDIEGVPRLIDLGQCNDAIVAVELVEALSNLFQMD 420
Query: 360 INSLPVSIVLSWMEQKAIGILYTLLYLGVKGIYIGPKSPEFLTPRVFEILRKQFDLRLIS 419
IN LP+SI+LSWMEQKA IL++LL L +KG+YIGP P + + + L +DL I
Sbjct: 421 INELPLSIILSWMEQKAAAILWSLLSLDLKGMYIGPILPGWANEDIVKFLVDNYDLTPIG 480
Query: 420 EPEKDLREML 429
+PE+D+R++L
Sbjct: 481 DPEEDIRKIL 490
>sp|O27502|PRIS_METTH PRISMANE PROTEIN HOMOLOG (HYBRID-CLUSTER PROTEIN) (HCP)
Length = 427
Score = 446 bits (1135), Expect = e-124
Identities = 212/430 (49%), Positives = 284/430 (65%), Gaps = 5/430 (1%)
Query: 1 MLCNQCSMSLSG-GCTVRGVCGKDPDLNSLQDALIYGIKGTAAYYYHALEMGYDNPEIGH 59
M C QCS ++ G CT+RGVCGK+P + LQD L++ IKG +AY YHA E+GY + E+
Sbjct: 1 MFCYQCSQTVRGRACTIRGVCGKEPTVARLQDNLLFAIKGISAYLYHARELGYTDEEVDA 60
Query: 60 FLAEALYSTLTNVNFDKNRFIDLILENGRIHLEAMKLLDKAYTETFGLPKPVEVPTGTTE 119
FL YSTLTNVNFD FIDL LE G +++ MKLL KA+ +T+G P+P EV G E
Sbjct: 61 FLERGFYSTLTNVNFDAGEFIDLALEAGEMNIRTMKLLKKAHIDTYGEPEPTEVRVGALE 120
Query: 120 GHGIVVTGHSYKALYELLNQIREMGLEEEIKVYTHSEMLPAHSYPEIRKFKSLYGNWGGS 179
G I+ TGHS +AL ELL Q G I VYTHSE+LPAH YP +RK+ L G GG
Sbjct: 121 GPAIIATGHSLRALEELLKQTEGTG----INVYTHSELLPAHGYPGLRKYPHLAGQLGGP 176
Query: 180 WVYQRKEFAEFPGVIIGTSNCVQQPTKAYQDRIFTVGIAGLEGVPHLEDYDFEPAIKRAL 239
W Q+ F+ + I+GTSNCV P Y+DR+FT G+A L GV HLE YDF P I +AL
Sbjct: 177 WFDQKDTFSRYTAAILGTSNCVLLPRDDYRDRMFTCGVAALPGVEHLEGYDFSPLIDKAL 236
Query: 240 ETPKMGKREGEKIVTGFHHTYILAMKDKLIELINEGKIRHIFVIGGCDVPNPKMSYYEKL 299
E P + + + + TGF + IL++ DK+ EL+ +GKIR F++GGCD P P+ YY +
Sbjct: 237 ELPPLSEEDATTLTTGFGLSTILSLADKIRELVEDGKIRRFFLVGGCDSPLPRAKYYTEF 296
Query: 300 TELVPRDAIILSAACGKFRYNRRDYGSIEGIPRFMDFGQCNNVYSIIEIALALAKELDMD 359
+P D ++L+ ACGK+R+N D G IEG+PR +D GQCN+ +E+ AL+ MD
Sbjct: 297 VRKLPEDTVVLTLACGKYRFNSMDLGDIEGVPRLIDLGQCNDAIVAVELVEALSNLFQMD 356
Query: 360 INSLPVSIVLSWMEQKAIGILYTLLYLGVKGIYIGPKSPEFLTPRVFEILRKQFDLRLIS 419
IN LP+SI+LSWMEQKA IL++LL L +KG+YIGP P + + + L +DL I
Sbjct: 357 INELPLSIILSWMEQKAAAILWSLLSLDLKGMYIGPILPGWANEDIVKFLVDNYDLTPIG 416
Query: 420 EPEKDLREML 429
+PE+D+R++L
Sbjct: 417 DPEEDIRKIL 426
>pir||E69060 hybrid cluster [4Fe-2S-3O] protein - Methanobacterium
thermoautotrophicum (strain Delta H)
>gi|2622566|gb|AAB85928.1| (AE000906) 6Fe-6S
prismane-containing protein [Methanobacterium
thermoautotrophicum]
Length = 476
Score = 446 bits (1135), Expect = e-124
Identities = 212/430 (49%), Positives = 284/430 (65%), Gaps = 5/430 (1%)
Query: 1 MLCNQCSMSLSG-GCTVRGVCGKDPDLNSLQDALIYGIKGTAAYYYHALEMGYDNPEIGH 59
M C QCS ++ G CT+RGVCGK+P + LQD L++ IKG +AY YHA E+GY + E+
Sbjct: 50 MFCYQCSQTVRGRACTIRGVCGKEPTVARLQDNLLFAIKGISAYLYHARELGYTDEEVDA 109
Query: 60 FLAEALYSTLTNVNFDKNRFIDLILENGRIHLEAMKLLDKAYTETFGLPKPVEVPTGTTE 119
FL YSTLTNVNFD FIDL LE G +++ MKLL KA+ +T+G P+P EV G E
Sbjct: 110 FLERGFYSTLTNVNFDAGEFIDLALEAGEMNIRTMKLLKKAHIDTYGEPEPTEVRVGALE 169
Query: 120 GHGIVVTGHSYKALYELLNQIREMGLEEEIKVYTHSEMLPAHSYPEIRKFKSLYGNWGGS 179
G I+ TGHS +AL ELL Q G I VYTHSE+LPAH YP +RK+ L G GG
Sbjct: 170 GPAIIATGHSLRALEELLKQTEGTG----INVYTHSELLPAHGYPGLRKYPHLAGQLGGP 225
Query: 180 WVYQRKEFAEFPGVIIGTSNCVQQPTKAYQDRIFTVGIAGLEGVPHLEDYDFEPAIKRAL 239
W Q+ F+ + I+GTSNCV P Y+DR+FT G+A L GV HLE YDF P I +AL
Sbjct: 226 WFDQKDTFSRYTAAILGTSNCVLLPRDDYRDRMFTCGVAALPGVEHLEGYDFSPLIDKAL 285
Query: 240 ETPKMGKREGEKIVTGFHHTYILAMKDKLIELINEGKIRHIFVIGGCDVPNPKMSYYEKL 299
E P + + + + TGF + IL++ DK+ EL+ +GKIR F++GGCD P P+ YY +
Sbjct: 286 ELPPLSEEDATTLTTGFGLSTILSLADKIRELVEDGKIRRFFLVGGCDSPLPRAKYYTEF 345
Query: 300 TELVPRDAIILSAACGKFRYNRRDYGSIEGIPRFMDFGQCNNVYSIIEIALALAKELDMD 359
+P D ++L+ ACGK+R+N D G IEG+PR +D GQCN+ +E+ AL+ MD
Sbjct: 346 VRKLPEDTVVLTLACGKYRFNSMDLGDIEGVPRLIDLGQCNDAIVAVELVEALSNLFQMD 405
Query: 360 INSLPVSIVLSWMEQKAIGILYTLLYLGVKGIYIGPKSPEFLTPRVFEILRKQFDLRLIS 419
IN LP+SI+LSWMEQKA IL++LL L +KG+YIGP P + + + L +DL I
Sbjct: 406 INELPLSIILSWMEQKAAAILWSLLSLDLKGMYIGPILPGWANEDIVKFLVDNYDLTPIG 465
Query: 420 EPEKDLREML 429
+PE+D+R++L
Sbjct: 466 DPEEDIRKIL 475
>pir||E64395 hybrid cluster [4Fe-2S-3O] protein MJ0765 [similarity] -
Methanococcus jannaschii >gi|1592305|gb|AAB98761.1|
(U67522) [6Fe-6S] prismane-containing protein
[Methanococcus jannaschii]
Length = 548
Score = 339 bits (861), Expect = 3e-92
Identities = 169/411 (41%), Positives = 259/411 (62%), Gaps = 12/411 (2%)
Query: 25 DLNSLQDALIYGIKGTAAYYYHALEMGYDNPEIGHFLAEALYSTLTNVNFDKNRFIDLIL 84
D+ SL++ + YGIKG AY HA+ +GY+N +I F+ +A + + + D+ +L +
Sbjct: 143 DIRSLKELITYGIKGIGAYLSHAMHLGYNNEDIHKFIIKAFTKIVDSKDADE--LFNLAM 200
Query: 85 ENGRIHLEAMKLLDKAYTETFGLPKPVEVPTGTTEGHGIVVTGHSYKALYELLNQIREMG 144
E G+ +E + LLDKA TET+G P+ EV G + GI+++GH K L +LL Q ++ G
Sbjct: 201 ETGKYAVETLALLDKANTETYGHPEITEVNLGVRDRPGILISGHDLKDLEQLLEQSKDAG 260
Query: 145 LEEEIKVYTHSEMLPAHSYPEIRKFKSLYGNWGGSWVYQRKEFAEFPGVIIGTSNCVQQP 204
++ +YTH EMLPAH YP +K++ GN+GGSW +QR+EF +F G I+ T+NC+ P
Sbjct: 261 VD----IYTHCEMLPAHYYPFFKKYEHFVGNYGGSWPFQREEFEKFNGPIVMTTNCLVPP 316
Query: 205 TKAYQDRIFT---VGIAGLEGVPHLED--YDFEPAIKRALETPKMGKREGEKIVTGFHHT 259
+Y+DR++ VG GL+ +P ED DF I+ A + E KIV GF H
Sbjct: 317 KDSYKDRVYVTNEVGYPGLKRIPVKEDGTKDFSEVIEHAKKCKPPTPLENGKIVGGFAHN 376
Query: 260 YILAMKDKLIELINEGKIRHIFVIGGCDVPNPKMSYYEKLTELVPRDAIILSAACGKFRY 319
+LA+ DK+IE + GKIR V+ GCD + YY + + +P+D +IL+ C K+R+
Sbjct: 377 QVLALADKVIEAVKSGKIRKFVVMAGCDGRHKTREYYTEFAKKLPKDTVILTCGCAKYRF 436
Query: 320 NRRDYGSIEGIPRFMDFGQCNNVYSIIEIALALAKELDM-DINSLPVSIVLSWMEQKAIG 378
+ D G I+GIPR +D GQCN+ YS+++IALAL + D+N LP++ +SW EQKA+
Sbjct: 437 IKLDLGDIDGIPRVLDAGQCNDSYSLVKIALALKDAFGLNDVNELPIAYNISWYEQKAVT 496
Query: 379 ILYTLLYLGVKGIYIGPKSPEFLTPRVFEILRKQFDLRLISEPEKDLREML 429
+L LLYLGVK I +GP P FL+P V ++L ++F + IS ++D++ ++
Sbjct: 497 VLLALLYLGVKNIVLGPTLPAFLSPNVTKVLVEKFGISTISTVDEDIKRLV 547
>sp|Q58175|PRIS_METJA PRISMANE PROTEIN HOMOLOG (HYBRID-CLUSTER PROTEIN) (HCP)
Length = 539
Score = 339 bits (861), Expect = 3e-92
Identities = 169/411 (41%), Positives = 259/411 (62%), Gaps = 12/411 (2%)
Query: 25 DLNSLQDALIYGIKGTAAYYYHALEMGYDNPEIGHFLAEALYSTLTNVNFDKNRFIDLIL 84
D+ SL++ + YGIKG AY HA+ +GY+N +I F+ +A + + + D+ +L +
Sbjct: 134 DIRSLKELITYGIKGIGAYLSHAMHLGYNNEDIHKFIIKAFTKIVDSKDADE--LFNLAM 191
Query: 85 ENGRIHLEAMKLLDKAYTETFGLPKPVEVPTGTTEGHGIVVTGHSYKALYELLNQIREMG 144
E G+ +E + LLDKA TET+G P+ EV G + GI+++GH K L +LL Q ++ G
Sbjct: 192 ETGKYAVETLALLDKANTETYGHPEITEVNLGVRDRPGILISGHDLKDLEQLLEQSKDAG 251
Query: 145 LEEEIKVYTHSEMLPAHSYPEIRKFKSLYGNWGGSWVYQRKEFAEFPGVIIGTSNCVQQP 204
++ +YTH EMLPAH YP +K++ GN+GGSW +QR+EF +F G I+ T+NC+ P
Sbjct: 252 VD----IYTHCEMLPAHYYPFFKKYEHFVGNYGGSWPFQREEFEKFNGPIVMTTNCLVPP 307
Query: 205 TKAYQDRIFT---VGIAGLEGVPHLED--YDFEPAIKRALETPKMGKREGEKIVTGFHHT 259
+Y+DR++ VG GL+ +P ED DF I+ A + E KIV GF H
Sbjct: 308 KDSYKDRVYVTNEVGYPGLKRIPVKEDGTKDFSEVIEHAKKCKPPTPLENGKIVGGFAHN 367
Query: 260 YILAMKDKLIELINEGKIRHIFVIGGCDVPNPKMSYYEKLTELVPRDAIILSAACGKFRY 319
+LA+ DK+IE + GKIR V+ GCD + YY + + +P+D +IL+ C K+R+
Sbjct: 368 QVLALADKVIEAVKSGKIRKFVVMAGCDGRHKTREYYTEFAKKLPKDTVILTCGCAKYRF 427
Query: 320 NRRDYGSIEGIPRFMDFGQCNNVYSIIEIALALAKELDM-DINSLPVSIVLSWMEQKAIG 378
+ D G I+GIPR +D GQCN+ YS+++IALAL + D+N LP++ +SW EQKA+
Sbjct: 428 IKLDLGDIDGIPRVLDAGQCNDSYSLVKIALALKDAFGLNDVNELPIAYNISWYEQKAVT 487
Query: 379 ILYTLLYLGVKGIYIGPKSPEFLTPRVFEILRKQFDLRLISEPEKDLREML 429
+L LLYLGVK I +GP P FL+P V ++L ++F + IS ++D++ ++
Sbjct: 488 VLLALLYLGVKNIVLGPTLPAFLSPNVTKVLVEKFGISTISTVDEDIKRLV 538
>gb|AAC73960.1| (AE000189) putative prismane [Escherichia coli K12]
Length = 552
Score = 337 bits (854), Expect = 2e-91
Identities = 177/400 (44%), Positives = 245/400 (61%), Gaps = 9/400 (2%)
Query: 34 IYGIKGTAAYYYHALEMG-YDNPEIGHFLAEALYSTLTNVNFDKNRFIDLILENGRIHLE 92
+YG+KG AAY HA +G YDN + + + L D N ++ +E G+++ +
Sbjct: 158 LYGLKGAAAYMEHAHVLGQYDNDIYAQY--HKIMAWLGTWPADMNALLECSMEIGQMNFK 215
Query: 93 AMKLLDKAYTETFGLPKPVEVPTGTTEGHGIVVTGHSYKALYELLNQIREMGLEEEIKVY 152
M +LD T +G P P +V T G I+++GH K LY LL Q G + VY
Sbjct: 216 VMSILDAGETGKYGHPTPTQVNVKATAGKCILISGHDLKDLYNLLEQTEGTG----VNVY 271
Query: 153 THSEMLPAHSYPEIRKFKSLYGNWGGSWVYQRKEFAEFPGVIIGTSNCVQQPTK-AYQDR 211
TH EMLPAH YPE+RKFK L GN+G W Q+ EFA FPG I+ TSNC+ PT AY DR
Sbjct: 272 THGEMLPAHGYPELRKFKHLVGNYGSGWQNQQVEFARFPGPIVMTSNCIIDPTVGAYDDR 331
Query: 212 IFTVGIAGLEGVPHLEDYDFEPAIKRALETPKMGKREGEKIVT-GFHHTYILAMKDKLIE 270
I+T I G GV HL+ DF I +A + E ++T GF +L D LI+
Sbjct: 332 IWTRSIVGWPGVRHLDGDDFSAVITQAQQMAGFPYSEIPHLITVGFGRQTLLGAADTLID 391
Query: 271 LINEGKIRHIFVIGGCDVPNPKMSYYEKLTELVPRDAIILSAACGKFRYNRRDYGSIEGI 330
L++ K+RHIF++GGCD + Y+ VP D +IL+ ACGK+R+N+ ++G IEG+
Sbjct: 392 LVSREKLRHIFLLGGCDGARGERHYFTDFATSVPDDCLILTLACGKYRFNKLEFGDIEGL 451
Query: 331 PRFMDFGQCNNVYSIIEIALALAKELDMDINSLPVSIVLSWMEQKAIGILYTLLYLGVKG 390
PR +D GQCN+ YS I +A+ LA++L +N LP+S+VLSW EQKAI IL TLL LGVK
Sbjct: 452 PRLVDAGQCNDAYSAIILAVTLAEKLGCGVNDLPLSLVLSWFEQKAIVILLTLLSLGVKN 511
Query: 391 IYIGPKSPEFLTPRVFEILRKQFDLRLISEPEKDLREMLS 430
I GP +P FLTP + +L ++F LR I+ E+D++++LS
Sbjct: 512 IVTGPTAPGFLTPDLLAVLNEKFGLRSITTVEEDMKQLLS 551
>dbj|BAA35587.1| (D90724) Prismane [6Fe-6S] protein [Escherichia coli]
Length = 550
Score = 337 bits (854), Expect = 2e-91
Identities = 177/400 (44%), Positives = 245/400 (61%), Gaps = 9/400 (2%)
Query: 34 IYGIKGTAAYYYHALEMG-YDNPEIGHFLAEALYSTLTNVNFDKNRFIDLILENGRIHLE 92
+YG+KG AAY HA +G YDN + + + L D N ++ +E G+++ +
Sbjct: 156 LYGLKGAAAYMEHAHVLGQYDNDIYAQY--HKIMAWLGTWPADMNALLECSMEIGQMNFK 213
Query: 93 AMKLLDKAYTETFGLPKPVEVPTGTTEGHGIVVTGHSYKALYELLNQIREMGLEEEIKVY 152
M +LD T +G P P +V T G I+++GH K LY LL Q G + VY
Sbjct: 214 VMSILDAGETGKYGHPTPTQVNVKATAGKCILISGHDLKDLYNLLEQTEGTG----VNVY 269
Query: 153 THSEMLPAHSYPEIRKFKSLYGNWGGSWVYQRKEFAEFPGVIIGTSNCVQQPTK-AYQDR 211
TH EMLPAH YPE+RKFK L GN+G W Q+ EFA FPG I+ TSNC+ PT AY DR
Sbjct: 270 THGEMLPAHGYPELRKFKHLVGNYGSGWQNQQVEFARFPGPIVMTSNCIIDPTVGAYDDR 329
Query: 212 IFTVGIAGLEGVPHLEDYDFEPAIKRALETPKMGKREGEKIVT-GFHHTYILAMKDKLIE 270
I+T I G GV HL+ DF I +A + E ++T GF +L D LI+
Sbjct: 330 IWTRSIVGWPGVRHLDGDDFSAVITQAQQMAGFPYSEIPHLITVGFGRQTLLGAADTLID 389
Query: 271 LINEGKIRHIFVIGGCDVPNPKMSYYEKLTELVPRDAIILSAACGKFRYNRRDYGSIEGI 330
L++ K+RHIF++GGCD + Y+ VP D +IL+ ACGK+R+N+ ++G IEG+
Sbjct: 390 LVSREKLRHIFLLGGCDGARGERHYFTDFATSVPDDCLILTLACGKYRFNKLEFGDIEGL 449
Query: 331 PRFMDFGQCNNVYSIIEIALALAKELDMDINSLPVSIVLSWMEQKAIGILYTLLYLGVKG 390
PR +D GQCN+ YS I +A+ LA++L +N LP+S+VLSW EQKAI IL TLL LGVK
Sbjct: 450 PRLVDAGQCNDAYSAIILAVTLAEKLGCGVNDLPLSLVLSWFEQKAIVILLTLLSLGVKN 509
Query: 391 IYIGPKSPEFLTPRVFEILRKQFDLRLISEPEKDLREMLS 430
I GP +P FLTP + +L ++F LR I+ E+D++++LS
Sbjct: 510 IVTGPTAPGFLTPDLLAVLNEKFGLRSITTVEEDMKQLLS 549
>sp|P75825|PRIS_ECOLI PRISMANE PROTEIN HOMOLOG (HYBRID-CLUSTER PROTEIN) (HCP)
>gi|7430815|pir||A64826 hybrid cluster [4Fe-2S-3O]
protein ybjW [similarity] - Escherichia coli
Length = 550
Score = 337 bits (854), Expect = 2e-91
Identities = 177/400 (44%), Positives = 245/400 (61%), Gaps = 9/400 (2%)
Query: 34 IYGIKGTAAYYYHALEMG-YDNPEIGHFLAEALYSTLTNVNFDKNRFIDLILENGRIHLE 92
+YG+KG AAY HA +G YDN + + + L D N ++ +E G+++ +
Sbjct: 156 LYGLKGAAAYMEHAHVLGQYDNDIYAQY--HKIMAWLGTWPADMNALLECSMEIGQMNFK 213
Query: 93 AMKLLDKAYTETFGLPKPVEVPTGTTEGHGIVVTGHSYKALYELLNQIREMGLEEEIKVY 152
M +LD T +G P P +V T G I+++GH K LY LL Q G + VY
Sbjct: 214 VMSILDAGETGKYGHPTPTQVNVKATAGKCILISGHDLKDLYNLLEQTEGTG----VNVY 269
Query: 153 THSEMLPAHSYPEIRKFKSLYGNWGGSWVYQRKEFAEFPGVIIGTSNCVQQPTK-AYQDR 211
TH EMLPAH YPE+RKFK L GN+G W Q+ EFA FPG I+ TSNC+ PT AY DR
Sbjct: 270 THGEMLPAHGYPELRKFKHLVGNYGSGWQNQQVEFARFPGPIVMTSNCIIDPTVGAYDDR 329
Query: 212 IFTVGIAGLEGVPHLEDYDFEPAIKRALETPKMGKREGEKIVT-GFHHTYILAMKDKLIE 270
I+T I G GV HL+ DF I +A + E ++T GF +L D LI+
Sbjct: 330 IWTRSIVGWPGVRHLDGDDFSAVITQAQQMAGFPYSEIPHLITVGFGRQTLLGAADTLID 389
Query: 271 LINEGKIRHIFVIGGCDVPNPKMSYYEKLTELVPRDAIILSAACGKFRYNRRDYGSIEGI 330
L++ K+RHIF++GGCD + Y+ VP D +IL+ ACGK+R+N+ ++G IEG+
Sbjct: 390 LVSREKLRHIFLLGGCDGARGERHYFTDFATSVPDDCLILTLACGKYRFNKLEFGDIEGL 449
Query: 331 PRFMDFGQCNNVYSIIEIALALAKELDMDINSLPVSIVLSWMEQKAIGILYTLLYLGVKG 390
PR +D GQCN+ YS I +A+ LA++L +N LP+S+VLSW EQKAI IL TLL LGVK
Sbjct: 450 PRLVDAGQCNDAYSAIILAVTLAEKLGCGVNDLPLSLVLSWFEQKAIVILLTLLSLGVKN 509
Query: 391 IYIGPKSPEFLTPRVFEILRKQFDLRLISEPEKDLREMLS 430
I GP +P FLTP + +L ++F LR I+ E+D++++LS
Sbjct: 510 IVTGPTAPGFLTPDLLAVLNEKFGLRSITTVEEDMKQLLS 549
>sp|P96095|PRIS_THIFE PRISMANE PROTEIN HOMOLOG (HYBRID-CLUSTER PROTEIN) (HCP)
>gi|1657804|gb|AAC80175.1| (U73041) prismane
[Acidithiobacillus ferrooxidans]
Length = 556
Score = 328 bits (833), Expect = 6e-89
Identities = 163/409 (39%), Positives = 258/409 (62%), Gaps = 8/409 (1%)
Query: 25 DLNSLQDALIYGIKGTAAYYYHALEMGYDNPEIGHFLAEALYSTLTNVNFDKNRFIDLIL 84
D+ + ++YG+KG A HA +GY + E+ AE + L + D + ++ L
Sbjct: 150 DVIGARALILYGMKGVALIAQHARVLGYQSDEVMP-QAEEILDYLASNPTDLDEMLEESL 208
Query: 85 ENGRIHLEAMKLLDKAYTETFGLPKPVEVPTGTTEGHGIVVTGHSYKALYELLNQIREMG 144
E GR++L+ M+LLD A T++FG + V +G I+V+GH L ++L Q ++ G
Sbjct: 209 EVGRLNLKVMELLDVANTDSFGAQEITSVRISPIQGKAILVSGHDLHDLKQILEQTKDQG 268
Query: 145 LEEEIKVYTHSEMLPAHSYPEIRKFKSLYGNWGGSWVYQRKEFAEFPGVIIGTSNCVQQP 204
I VYTH EMLPA++YP ++ + L GN GG+W Q++EFA+FPG I+ TSNC+ +P
Sbjct: 269 ----INVYTHGEMLPANAYPLLKAYPHLAGNLGGAWQDQQREFADFPGPIVMTSNCIIEP 324
Query: 205 TKAYQDRIFTVGIAGLEGVPHLEDYDFEPAIKRALETPKM-GKREGEKIVTGFHHTYILA 263
++Y++RIFT+G G GV H+++ DF P I+ A P + ++I GF H +L
Sbjct: 325 GRSYKNRIFTLGPVGWPGVRHIDNGDFTPVIQAAKALPGFTADAKEQRITIGFGHHTLLG 384
Query: 264 MKDKLIELINEGKIRHIFVIGGCDVPNPKMSYYEKLTELVPRDAIILSAACGKFRYNRRD 323
+ DK+++ + G IRH F++GGCD +P +Y+ ++ + P D+++++ CGK+R+N+ +
Sbjct: 385 VADKIVDAVKHGDIRHFFLVGGCDGVSPARNYFTEVADNAPADSVVMTLGCGKYRFNKHE 444
Query: 324 YGSIEGIPRFMDFGQCNNVYSIIEIALALAKELDMDINSLPVSIVLSWMEQKAIGILYTL 383
+G I GIPR +D GQCN+ +S I +A ALA+ + +N LP+SI+LSW EQKA I +L
Sbjct: 445 FGDIGGIPRLLDIGQCNDAHSAIRVAGALAEAFNCGVNDLPLSIMLSWFEQKATAIHLSL 504
Query: 384 LYLGVKGIYIGPKSPEFLTPRVFEILRKQF--DLRLISEPEKDLREMLS 430
L LG+KGI +GP P +LTP + + L+ +F DL LI E + DL+ L+
Sbjct: 505 LALGIKGIKLGPTLPAYLTPTLVQKLQSRFDLDLDLIGEAQADLQAALA 553
>pdb|1E1D|A Chain A, Hybrid Cluster Protein From Desulfovibrio Vulgaris
Length = 553
Score = 323 bits (820), Expect = 2e-87
Identities = 170/418 (40%), Positives = 252/418 (59%), Gaps = 15/418 (3%)
Query: 22 KDPDLNSLQDALIYGIKGTAAYYYHALEMGYDNPEIGHFLAEALYSTLTNVNFDKNRFID 81
++ D+ SL++ LI G+KG AAY HA +G+ EI F+ EAL ST +++ D+ +
Sbjct: 140 ENEDVRSLRELLIIGLKGVAAYAEHAAVLGFRKTEIDEFMLEALASTTKDLSVDE--MVA 197
Query: 82 LILENGRIHLEAMKLLDKAYTETFGLPKPVEVPTGTTEGHGIVVTGHSYKALYELLNQIR 141
L+++ R+ + M LLD+A T T+G P+ +V G + GI+++GH K + ELL Q
Sbjct: 198 LVMKGRRMAVTTMALLDEANTTTYGNPEITQVNIGVGKNPGILISGHDLKDMAELLKQTE 257
Query: 142 EMGLEEEIKVYTHSEMLPAHSYPEIRKFKSLYGNWGGSWVYQRKEFAEFPGVIIGTSNCV 201
G++ VYTH EMLPA+ YP +K+ GN+GGSW Q EF F G I+ T+NC+
Sbjct: 258 GTGVD----VYTHGEMLPANYYPAFKKYPHFVGNYGGSWWQQNPEFESFNGPILLTTNCL 313
Query: 202 QQPTK--AYQDRIFTVGIAGLEGVPHLEDY------DFEPAIKRALETPKMGKREGEKIV 253
K Y DR++T G+ G EG H+ D DF I +A + P + E IV
Sbjct: 314 VPLKKENTYLDRLYTTGVVGYEGAKHIADRPAGGAKDFSALIAQAKKCPPPVEIETGSIV 373
Query: 254 TGFHHTYILAMKDKLIELINEGKIRHIFVIGGCDVPNPKMSYYEKLTELVPRDAIILSAA 313
GF H +LA+ DK++E + G I+ V+ GCD SYY ++ E +P+D +IL+A
Sbjct: 374 GGFAHHQVLALADKVVEAVKSGAIKRFVVMAGCDGRQKSRSYYTEVAENLPKDTVILTAG 433
Query: 314 CGKFRYNRRDYGSIEGIPRFMDFGQCNNVYSIIEIALALAKELDM-DINSLPVSIVLSWM 372
C K+RYN+ + G I GIPR +D GQCN+ YS+ IAL L + + DIN LPVS ++W
Sbjct: 434 CAKYRYNKLNLGDIGGIPRVLDAGQCNDSYSLAVIALKLKEVFGLDDINDLPVSYDIAWY 493
Query: 373 EQKAIGILYTLLYLGVKGIYIGPKSPEFLTPRVFEILRKQFDLRLISEPEKDLREMLS 430
EQKA+ +L LL+LGVKGI +GP P FL+P V ++L + F+++ I + D+ M++
Sbjct: 494 EQKAVAVLLALLFLGVKGIRLGPTLPAFLSPNVAKVLVENFNIKPIGTVQDDIAAMMA 551
>sp|P31101|PRIS_DESVH PRISMANE PROTEIN (HYBRID-CLUSTER PROTEIN) (HCP)
>gi|11374312|pir||S29861 hybrid cluster [4Fe-2S-3O]
protein [validated] - Desulfovibrio vulgaris
>gi|3123494|emb|CAA77767.1| (Z11707) Prismane protein
[Desulfovibrio vulgaris]
Length = 553
Score = 323 bits (819), Expect = 3e-87
Identities = 170/418 (40%), Positives = 252/418 (59%), Gaps = 15/418 (3%)
Query: 22 KDPDLNSLQDALIYGIKGTAAYYYHALEMGYDNPEIGHFLAEALYSTLTNVNFDKNRFID 81
++ D+ SL++ LI G+KG AAY HA +G+ EI F+ EAL ST +++ D+ +
Sbjct: 140 ENEDVRSLRELLIIGLKGVAAYAEHAAVLGFRKTEIDEFMLEALASTTKDLSVDE--MVA 197
Query: 82 LILENGRIHLEAMKLLDKAYTETFGLPKPVEVPTGTTEGHGIVVTGHSYKALYELLNQIR 141
L+++ G + + M LLD+A T T+G P+ +V G + GI+++GH K + ELL Q
Sbjct: 198 LVMKAGGMAVTTMALLDEANTTTYGNPEITQVNIGVGKNPGILISGHDLKDMAELLKQTE 257
Query: 142 EMGLEEEIKVYTHSEMLPAHSYPEIRKFKSLYGNWGGSWVYQRKEFAEFPGVIIGTSNCV 201
G++ VYTH EMLPA+ YP +K+ GN+GGSW Q EF F G I+ T+NC+
Sbjct: 258 GTGVD----VYTHGEMLPANYYPAFKKYPHFVGNYGGSWWQQNPEFESFNGPILLTTNCL 313
Query: 202 QQPTK--AYQDRIFTVGIAGLEGVPHLEDY------DFEPAIKRALETPKMGKREGEKIV 253
K Y DR++T G+ G EG H+ D DF I +A + P + E IV
Sbjct: 314 VPLKKENTYLDRLYTTGVVGYEGAKHIADRPAGGAKDFSALIAQAKKCPPPVEIETGSIV 373
Query: 254 TGFHHTYILAMKDKLIELINEGKIRHIFVIGGCDVPNPKMSYYEKLTELVPRDAIILSAA 313
GF H +LA+ DK++E + G I+ V+ GCD SYY ++ E +P+D +IL+A
Sbjct: 374 GGFAHHQVLALADKVVEAVKSGAIKRFVVMAGCDGRQKSRSYYTEVAENLPKDTVILTAG 433
Query: 314 CGKFRYNRRDYGSIEGIPRFMDFGQCNNVYSIIEIALALAKELDM-DINSLPVSIVLSWM 372
C K+RYN+ + G I GIPR +D GQCN+ YS+ IAL L + + DIN LPVS ++W
Sbjct: 434 CAKYRYNKLNLGDIGGIPRVLDAGQCNDSYSLAVIALKLKEVFGLDDINDLPVSYDIAWY 493
Query: 373 EQKAIGILYTLLYLGVKGIYIGPKSPEFLTPRVFEILRKQFDLRLISEPEKDLREMLS 430
EQKA+ +L LL+LGVKGI +GP P FL+P V ++L + F+++ I + D+ M++
Sbjct: 494 EQKAVAVLLALLFLGVKGIRLGPTLPAFLSPNVAKVLVENFNIKPIGTVQDDIAAMMA 551
>sp|Q01770|PRIS_DESDE PRISMANE PROTEIN (HYBRID-CLUSTER PROTEIN) (HCP)
>gi|97362|pir||S24389 hybrid cluster [4Fe-2S-3O] protein
[validated] - Desulfovibrio desulfuricans
>gi|49286|emb|CAA78029.1| (Z11975) prismane protein
[Desulfovibrio desulfuricans]
Length = 545
Score = 312 bits (791), Expect = 5e-84
Identities = 168/426 (39%), Positives = 246/426 (57%), Gaps = 11/426 (2%)
Query: 7 SMSLSGGCTVRGVCGKDPDLNSLQDALIYGIKGTAAYYYHALEMGYDNPEIGHFLAEALY 66
S L+ TV + D D+ SL+ + +G+KG AAY HA +G + F+ EAL
Sbjct: 121 SAMLAKAGTVGVMATTDDDVRSLRWLITFGLKGMAAYAKHADVLGKHENSLDAFMQEALA 180
Query: 67 STLTNVNFDKNRFIDLILENGRIHLEAMKLLDKAYTETFGLPKPVEVPTGTTEGHGIVVT 126
TL + + + L LE G+ + AM LLD A T T+G P+ +V G GI+++
Sbjct: 181 KTLDD-SLSVADLVALTLETGKFGVSAMALLDAANTGTYGHPEITKVNIGVGSNPGILIS 239
Query: 127 GHSYKALYELLNQIREMGLEEEIKVYTHSEMLPAHSYPEIRKFKSLYGNWGGSWVYQRKE 186
GH + L LL Q G++ VYTHSEMLPAH YP +K+ GN+G +W Q++E
Sbjct: 240 GHDLRDLEMLLKQTEGTGVD----VYTHSEMLPAHYYPAFKKYAHFKGNYGNAWWKQKEE 295
Query: 187 FAEFPGVIIGTSNCVQQPTKAYQDRIFTVGIAGLEGVPHL-----EDYDFEPAIKRALET 241
F F G ++ T+NC+ P +Y+DR++T GI G G H+ E DF I A
Sbjct: 296 FESFNGPVLLTTNCLVPPKDSYKDRVYTTGIVGFTGCKHIPGEIGEHKDFSAIIAHAKTC 355
Query: 242 PKMGKREGEKIVTGFHHTYILAMKDKLIELINEGKIRHIFVIGGCDVPNPKMSYYEKLTE 301
P + E +I+ GF H +LA+ DK+I+ + G I+ V+ GCD SYY E
Sbjct: 356 PAPTEIESGEIIGGFAHNQVLALADKVIDAVKSGAIKKFVVMAGCDGRAKSRSYYTDFAE 415
Query: 302 LVPRDAIILSAACGKFRYNRRDYGSIEGIPRFMDFGQCNNVYSIIEIALALAKELDM-DI 360
+P+D +IL+A C K+RYN+ + G I GIPR +D GQCN+ YS+ IAL L + + D+
Sbjct: 416 GLPKDTVILTAGCAKYRYNKLNLGDIGGIPRVLDAGQCNDSYSLAVIALKLKEVFGLEDV 475
Query: 361 NSLPVSIVLSWMEQKAIGILYTLLYLGVKGIYIGPKSPEFLTPRVFEILRKQFDLRLISE 420
N LP+ ++W EQKA+ +L LL LGVK I++GP P FL+P V ++L +QF++ I+
Sbjct: 476 NDLPIVYNIAWYEQKAVIVLLALLSLGVKNIHLGPTLPAFLSPNVAKVLVEQFNIGGITS 535
Query: 421 PEKDLR 426
P+ DL+
Sbjct: 536 PQDDLK 541
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.320 0.141 0.417
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 175559490
Number of Sequences: 2977
Number of extensions: 7909316
Number of successful extensions: 17978
Number of sequences better than 1.0e-10: 14
Number of HSP's better than 0.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 17906
Number of HSP's gapped (non-prelim): 23
length of query: 446
length of database: 189,106,746
effective HSP length: 54
effective length of query: 392
effective length of database: 156,788,448
effective search space: 61461071616
effective search space used: 61461071616
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.8 bits)
S2: 166 (69.1 bits)