BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB1717 (cutA) DE:PERIPLASMIC DIVALENT CATION TOLERANCE PROTEIN
(101 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||C75074 periplasmic divalent cation tolerance protein PAB171... 212 1e-54
pir||C71091 probable periplasmic divalent cation tolerance prote... 192 1e-48
pir||B72302 periplasmic divalent cation tolerance protein - Ther... 101 3e-21
gi|11499560 periplasmic divalent cation tolerance protein (cutA)... 90 5e-18
pir||H72547 probable periplasmic divalent cation tolerance prote... 82 1e-15
pir||C69068 divalent cation tolerance protein - Methanobacterium... 81 3e-15
pir||E71728 hypothetical protein RP177 - Rickettsia prowazekii >... 81 4e-15
gb|AAC69129.1| (U78721) putative related to microbial divalent c... 76 8e-14
pir||H70386 periplasmic divalent cation tolerance protein - Aqui... 74 4e-13
gi|7706244 divalent cation tolerant protein CUTA [Homo sapiens] ... 74 5e-13
gb|AAF61220.1|AF230924_1 (AF230924) brain acetylcholinesterase p... 74 5e-13
gb|AAF48350.1| (AE003495) CG11590 gene product [Drosophila melan... 73 9e-13
sp|P36654|CUTA_ECOLI PERIPLASMIC DIVALENT CATION TOLERANCE PROTE... 68 2e-11
pir||H75291 periplasmic divalent cation tolerance protein - Dein... 68 2e-11
pir||B82784 periplasmic divalent cation tolerance protein XF0619... 66 9e-11
>pir||C75074 periplasmic divalent cation tolerance protein PAB1717 - Pyrococcus
abyssi (strain Orsay) >gi|5458408|emb|CAB49896.1|
(AJ248286) PERIPLASMIC DIVALENT CATION TOLERANCE PROTEIN
[Pyrococcus abyssi]
Length = 101
Score = 212 bits (533), Expect = 1e-54
Identities = 101/101 (100%), Positives = 101/101 (100%)
Query: 1 MIIVYTTFPDWESAEKIVKVLLEERLIACANLREHKAFYWWEGKIEEDSEVGAILKTKEE 60
MIIVYTTFPDWESAEKIVKVLLEERLIACANLREHKAFYWWEGKIEEDSEVGAILKTKEE
Sbjct: 1 MIIVYTTFPDWESAEKIVKVLLEERLIACANLREHKAFYWWEGKIEEDSEVGAILKTKEE 60
Query: 61 LWEQVKARLKELHPYTVPAIIRINVEDVNEDYLKWLLEETK 101
LWEQVKARLKELHPYTVPAIIRINVEDVNEDYLKWLLEETK
Sbjct: 61 LWEQVKARLKELHPYTVPAIIRINVEDVNEDYLKWLLEETK 101
>pir||C71091 probable periplasmic divalent cation tolerance protein CutA -
Pyrococcus horikoshii >gi|3257406|dbj|BAA30089.1|
(AP000004) 102aa long hypothetical periplasmic divalent
cation tolerance protein CutA [Pyrococcus horikoshii]
Length = 102
Score = 192 bits (482), Expect = 1e-48
Identities = 86/101 (85%), Positives = 97/101 (95%)
Query: 1 MIIVYTTFPDWESAEKIVKVLLEERLIACANLREHKAFYWWEGKIEEDSEVGAILKTKEE 60
MIIVYTTFPDWESAEK+VK LL+ERLIACANLREH+AFYWWEGKIEED EVGAILKT+E+
Sbjct: 1 MIIVYTTFPDWESAEKVVKTLLKERLIACANLREHRAFYWWEGKIEEDKEVGAILKTRED 60
Query: 61 LWEQVKARLKELHPYTVPAIIRINVEDVNEDYLKWLLEETK 101
LWE++K R+KELHPY VPAIIRI+V+DVNEDYLKWL+EETK
Sbjct: 61 LWEELKERIKELHPYDVPAIIRIDVDDVNEDYLKWLIEETK 101
>pir||B72302 periplasmic divalent cation tolerance protein - Thermotoga
maritima (strain MSB8)
>gi|4981598|gb|AAD36133.1|AE001765_12 (AE001765)
periplasmic divalent cation tolerance protein
[Thermotoga maritima]
Length = 101
Score = 101 bits (248), Expect = 3e-21
Identities = 48/98 (48%), Positives = 68/98 (68%)
Query: 1 MIIVYTTFPDWESAEKIVKVLLEERLIACANLREHKAFYWWEGKIEEDSEVGAILKTKEE 60
MI+VY+TFP+ E A +I + LLE+RLIAC N E ++ YWW+G+I +D E AI KT EE
Sbjct: 1 MILVYSTFPNEEKALEIGRKLLEKRLIACFNAFEIRSGYWWKGEIVQDKEWAAIFKTTEE 60
Query: 61 LWEQVKARLKELHPYTVPAIIRINVEDVNEDYLKWLLE 98
+++ L++LHPY PAI + VE+V +Y+ WL E
Sbjct: 61 KEKELYEELRKLHPYETPAIFTLKVENVLTEYMNWLRE 98
>gi|11499560 periplasmic divalent cation tolerance protein (cutA)
[Archaeoglobus fulgidus] >gi|7450414|pir||A69497
periplasmic divalent cation tolerance protein (cutA)
homolog - Archaeoglobus fulgidus
>gi|2648562|gb|AAB89277.1| (AE000966) periplasmic
divalent cation tolerance protein (cutA) [Archaeoglobus
fulgidus]
Length = 102
Score = 90.5 bits (221), Expect = 5e-18
Identities = 41/95 (43%), Positives = 61/95 (64%)
Query: 4 VYTTFPDWESAEKIVKVLLEERLIACANLREHKAFYWWEGKIEEDSEVGAILKTKEELWE 63
+Y T P E AE+I K LLE++L AC N+ K+F+WWEGKIE +E I+KT+ E +
Sbjct: 5 IYITAPSLEEAERIAKRLLEKKLAACVNIFPIKSFFWWEGKIEAATEFAMIVKTRSEKFA 64
Query: 64 QVKARLKELHPYTVPAIIRINVEDVNEDYLKWLLE 98
+V+ +K +H YT P I I +E +++L W+ E
Sbjct: 65 EVRDEVKAMHSYTTPCICAIPIERGLKEFLDWIDE 99
>pir||H72547 probable periplasmic divalent cation tolerance protein APE1668 -
Aeropyrum pernix (strain K1) >gi|5105356|dbj|BAA80669.1|
(AP000062) 106aa long hypothetical periplasmic divalent
cation tolerance protein [Aeropyrum pernix]
Length = 106
Score = 82.3 bits (200), Expect = 1e-15
Identities = 38/98 (38%), Positives = 64/98 (64%), Gaps = 2/98 (2%)
Query: 3 IVYTTFPDWESAEKIVKVLLEERLIACANL-REHKAFYWWEGKIEEDSEVGAILKTKEEL 61
+V T P + +++ + ++E+RL AC N+ R K++YWWEG I D E I+KT EE
Sbjct: 6 VVLVTAPKGDG-DRLAREIVEQRLAACVNVVRGIKSYYWWEGSINLDDEDLLIIKTSEEK 64
Query: 62 WEQVKARLKELHPYTVPAIIRINVEDVNEDYLKWLLEE 99
+ + +KE+HPY+VP I+ ++V NE Y++W+++E
Sbjct: 65 LDSLIKAVKEMHPYSVPEILALDVSRGNESYVEWVVKE 102
>pir||C69068 divalent cation tolerance protein - Methanobacterium
thermoautotrophicum (strain Delta H)
>gi|2622627|gb|AAB85984.1| (AE000911) divalent cation
tolerance protein [Methanobacterium thermoautotrophicum]
Length = 105
Score = 81.1 bits (197), Expect = 3e-15
Identities = 41/100 (41%), Positives = 59/100 (59%), Gaps = 1/100 (1%)
Query: 3 IVYTTFPDWESAEKIVKVLLEERLIACANLREH-KAFYWWEGKIEEDSEVGAILKTKEEL 61
++Y T + + I + L+EERL AC N+ ++ Y WEG +EED E I+KT EL
Sbjct: 4 LIYITASSVDESASIGRKLVEERLAACVNIIPSIRSIYHWEGSMEEDEESALIVKTSHEL 63
Query: 62 WEQVKARLKELHPYTVPAIIRINVEDVNEDYLKWLLEETK 101
Q+ R++ELH Y P II I + + DYL+WL +E K
Sbjct: 64 TPQIIKRVRELHSYDNPCIISIPITGGSRDYLEWLDDEVK 103
>pir||E71728 hypothetical protein RP177 - Rickettsia prowazekii
>gi|3860743|emb|CAA14644.1| (AJ235270) unknown
[Rickettsia prowazekii]
Length = 149
Score = 80.8 bits (196), Expect = 4e-15
Identities = 37/99 (37%), Positives = 60/99 (60%)
Query: 3 IVYTTFPDWESAEKIVKVLLEERLIACANLREHKAFYWWEGKIEEDSEVGAILKTKEELW 62
++ TT D + AEKI +LLE AC + K++Y W KI ED+E I+KTK +
Sbjct: 51 LILTTTNDLQIAEKIASILLELNFAACIQMDNIKSYYRWNNKIIEDNEYRLIIKTKSYNY 110
Query: 63 EQVKARLKELHPYTVPAIIRINVEDVNEDYLKWLLEETK 101
++ ++ E+H Y +P II+IN++ + YLKW+ + +K
Sbjct: 111 NAIEHKILEMHNYALPQIIKINIDYGYQQYLKWIDQNSK 149
>gb|AAC69129.1| (U78721) putative related to microbial divalent cation tolerance
proteins [Arabidopsis thaliana]
Length = 182
Score = 76.5 bits (185), Expect = 8e-14
Identities = 35/101 (34%), Positives = 61/101 (59%), Gaps = 1/101 (0%)
Query: 2 IIVYTTFPDWESAEKIVKVLLEERLIACANLREH-KAFYWWEGKIEEDSEVGAILKTKEE 60
I+VY T P+ E+ +K+ +++E+L AC N+ ++ Y WEGK++ DSE I+KT++
Sbjct: 81 IVVYVTVPNREAGKKLANSIVQEKLAACVNIVPGIESVYEWEGKVQSDSEELLIIKTRQS 140
Query: 61 LWEQVKARLKELHPYTVPAIIRINVEDVNEDYLKWLLEETK 101
L E + + H Y VP +I + + ++ YL+WL T+
Sbjct: 141 LLEPLTEHVNANHEYDVPEVIALPITGGSDKYLEWLKNSTR 181
>pir||H70386 periplasmic divalent cation tolerance protein - Aquifex aeolicus
>gi|2983505|gb|AAC07082.1| (AE000718) periplasmic
divalent cation tolerance protein [Aquifex aeolicus]
Length = 104
Score = 74.1 bits (179), Expect = 4e-13
Identities = 35/100 (35%), Positives = 60/100 (60%), Gaps = 2/100 (2%)
Query: 3 IVYTTFPDWESAEKIVKVLLEERLIACANL-REHKAFYWWEGKIEEDSEVGAILKTKEEL 61
+V T P + E++ ++E +L AC N+ E + YWW+G IE+D E ++KT +
Sbjct: 6 VVLITVPV-DKGEELSNFIVENKLGACVNVVPEVNSVYWWKGNIEKDKEALLVVKTSAQK 64
Query: 62 WEQVKARLKELHPYTVPAIIRINVEDVNEDYLKWLLEETK 101
++++ ++K +HPYTVP II + + N DYL W+ + K
Sbjct: 65 FKELLEKVKSVHPYTVPEIIALPILAGNPDYLNWIEDSLK 104
>gi|7706244 divalent cation tolerant protein CUTA [Homo sapiens]
>gi|3169120|emb|CAA16160.1| (AL021366) cICK0721Q.5
(polypeptide from patented cDNA EMBL:E06811) [Homo
sapiens] >gi|4454995|gb|AAD21026.1| (AF106943) divalent
cation tolerant protein CUTA [Homo sapiens]
>gi|6624588|emb|CAB63779.1| (AL050332) dJ570F3.2
(POLYPEPTIDE FROM PATENTED CDNA EMBL:E06811) [Homo
sapiens]
Length = 156
Score = 73.7 bits (178), Expect = 5e-13
Identities = 37/98 (37%), Positives = 62/98 (62%), Gaps = 1/98 (1%)
Query: 5 YTTFPDWESAEKIVKVLLEERLIACANL-REHKAFYWWEGKIEEDSEVGAILKTKEELWE 63
+ T P+ + A++I + ++E+RL AC NL + + Y W+GKIEEDSEV ++KT+ L
Sbjct: 49 FVTCPNEKVAKEIARAVVEKRLAACVNLIPQITSIYEWKGKIEEDSEVLMMIKTQSSLVP 108
Query: 64 QVKARLKELHPYTVPAIIRINVEDVNEDYLKWLLEETK 101
+ ++ +HPY V +I + VE N YL+W+ + T+
Sbjct: 109 ALTDFVRSVHPYEVAEVIALPVEQGNFPYLQWVRQVTE 146
>gb|AAF61220.1|AF230924_1 (AF230924) brain acetylcholinesterase putative membrane anchor
[Homo sapiens]
Length = 136
Score = 73.7 bits (178), Expect = 5e-13
Identities = 37/98 (37%), Positives = 62/98 (62%), Gaps = 1/98 (1%)
Query: 5 YTTFPDWESAEKIVKVLLEERLIACANL-REHKAFYWWEGKIEEDSEVGAILKTKEELWE 63
+ T P+ + A++I + ++E+RL AC NL + + Y W+GKIEEDSEV ++KT+ L
Sbjct: 29 FVTCPNEKVAKEIARAVVEKRLAACVNLIPQITSIYEWKGKIEEDSEVLMMIKTQSSLVP 88
Query: 64 QVKARLKELHPYTVPAIIRINVEDVNEDYLKWLLEETK 101
+ ++ +HPY V +I + VE N YL+W+ + T+
Sbjct: 89 ALTDFVRSVHPYEVAEVIALPVEQGNFPYLQWVRQVTE 126
>gb|AAF48350.1| (AE003495) CG11590 gene product [Drosophila melanogaster]
Length = 198
Score = 73.0 bits (176), Expect = 9e-13
Identities = 33/97 (34%), Positives = 60/97 (61%), Gaps = 1/97 (1%)
Query: 3 IVYTTFPDWESAEKIVKVLLEERLIACANL-REHKAFYWWEGKIEEDSEVGAILKTKEEL 61
+ + T PD ESA K+ + ++E +L AC N+ + ++ Y WEG+I EDSE ++KT+
Sbjct: 92 VAFVTTPDRESARKLGRSIVELKLAACVNIVSQVESIYKWEGEISEDSEYLLMIKTRTSR 151
Query: 62 WEQVKARLKELHPYTVPAIIRINVEDVNEDYLKWLLE 98
+ + ++E HPY+V +I + +++ N YL W+ +
Sbjct: 152 IDDLSKFIRENHPYSVAEVIALPIQNGNPPYLDWIAQ 188
>sp|P36654|CUTA_ECOLI PERIPLASMIC DIVALENT CATION TOLERANCE PROTEIN CUTA (C-TYPE
CYTOCHROME BIOGENESIS PROTEIN CYCY)
>gi|2121103|pir||I41027 divalent cation tolerance
protein cutA1 - Escherichia coli
>gi|535291|emb|CAA85374.1| (Z36905) periplasmic divalent
cation tolerance protein [Escherichia coli]
>gi|536981|gb|AAA97036.1| (U14003) cycY gene product
[Escherichia coli] >gi|871028|emb|CAA54780.1| (X77707)
orf112 [Escherichia coli] >gi|1790579|gb|AAC77097.1|
(AE000486) divalent cation tolerance protein; cytochrome
c biogenesis [Escherichia coli K12]
Length = 112
Score = 68.3 bits (164), Expect = 2e-11
Identities = 36/96 (37%), Positives = 54/96 (55%), Gaps = 1/96 (1%)
Query: 2 IIVYTTFPDWESAEKIVKVLLEERLIACANLREHK-AFYWWEGKIEEDSEVGAILKTKEE 60
++V T PD +A+ + +L E+L ACA L + Y+WEGK+E++ EV ILKT
Sbjct: 12 VVVLCTAPDEATAQDLAAKVLAEKLAACATLIPGATSLYYWEGKLEQEYEVQMILKTTVS 71
Query: 61 LWEQVKARLKELHPYTVPAIIRINVEDVNEDYLKWL 96
+ + LK HPY P ++ + V + DYL WL
Sbjct: 72 HQQALLECLKSHHPYQTPELLVLPVTHGDTDYLSWL 107
>pir||H75291 periplasmic divalent cation tolerance protein - Deinococcus
radiodurans (strain R1)
>gi|6460102|gb|AAF11840.1|AE002061_7 (AE002061)
periplasmic divalent cation tolerance protein
[Deinococcus radiodurans]
Length = 102
Score = 68.3 bits (164), Expect = 2e-11
Identities = 32/96 (33%), Positives = 57/96 (59%), Gaps = 2/96 (2%)
Query: 2 IIVYTTFPDWESAEKIVKVLLEERLIACANLREH-KAFYWWEGKIEEDSEVGAILKTKEE 60
++V T P E A+++ + L+ ERL C N+ ++ Y W+G++ ED E ++KT E
Sbjct: 3 LVVLVTLPP-ERAQELARTLVTERLAGCVNILPGIQSIYRWDGEVAEDPESLLLIKTVGE 61
Query: 61 LWEQVKARLKELHPYTVPAIIRINVEDVNEDYLKWL 96
+ ++AR+K LHPY VP I+ + + + ++ WL
Sbjct: 62 QYPALEARIKSLHPYEVPEIVALPFDRASPEFQSWL 97
>pir||B82784 periplasmic divalent cation tolerance protein XF0619 [imported] -
Xylella fastidiosa (strain 9a5c)
>gi|9105491|gb|AAF83429.1|AE003907_7 (AE003907)
periplasmic divalent cation tolerance protein [Xylella
fastidiosa]
Length = 112
Score = 66.3 bits (159), Expect = 9e-11
Identities = 37/98 (37%), Positives = 53/98 (53%), Gaps = 1/98 (1%)
Query: 3 IVYTTFPDWESAEKIVKVLLEERLIACAN-LREHKAFYWWEGKIEEDSEVGAILKTKEEL 61
++++T PD SAE I +VL++ERL AC L + Y W+GKIE E+ ++KT
Sbjct: 7 LIFSTCPDLPSAEIISRVLVQERLAACVTQLPGAVSTYRWQGKIETTQEIQLLIKTNAVH 66
Query: 62 WEQVKARLKELHPYTVPAIIRINVEDVNEDYLKWLLEE 99
RL LHPY +P I + V +YL W+ E
Sbjct: 67 VNAAITRLCALHPYRLPEAIAVQVSVGLPEYLTWINTE 104
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.317 0.136 0.413
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 39755078
Number of Sequences: 2977
Number of extensions: 1433724
Number of successful extensions: 4407
Number of sequences better than 1.0e-10: 15
Number of HSP's better than 0.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 4392
Number of HSP's gapped (non-prelim): 15
length of query: 101
length of database: 189,106,746
effective HSP length: 50
effective length of query: 51
effective length of database: 159,182,396
effective search space: 8118302196
effective search space used: 8118302196
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.6 bits)
S2: 159 (66.3 bits)