BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB1756 (PAB1756) DE:Hypothetical protein
(277 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||G75138 hypothetical protein PAB1756 - Pyrococcus abyssi (st... 558 e-158
sp|O58801|YA74_PYRHO HYPOTHETICAL PROTEIN PH1074 >gi|7429818|pir... 490 e-137
sp|O26958|Y872_METTH HYPOTHETICAL PROTEIN MTH872 >gi|7429816|pir... 230 1e-59
pir||E64414 hypothetical protein MJ0917 - Methanococcus jannaschii 183 1e-45
gb|AAB98922.1| (U67535) conserved hypothetical protein [Methanoc... 183 1e-45
emb|CAC11761.1| (AL445064) conserved hypothetical protein [Therm... 160 2e-38
pir||I64141 hypothetical protein HI0072 - Haemophilus influenzae... 147 2e-34
pir||D83259 conserved hypothetical protein PA3088 [imported] - P... 146 2e-34
sp|P44497|YFJB_HAEIN PROTEIN HI0072 >gi|1573020|gb|AAC21749.1| (... 145 5e-34
pir||H82272 conserved hypothetical protein VC0853 [imported] - V... 133 3e-30
sp|P37768|YFJB_ECOLI HYPOTHETICAL 32.6 KDA PROTEIN IN GRPE-RECN ... 128 7e-29
gi|11499950 conserved hypothetical protein [Archaeoglobus fulgid... 125 7e-28
sp|Q9YD08|YB04_AERPE HYPOTHETICAL PROTEIN APE1104 >gi|7445315|pi... 122 5e-27
sp|P74430|Y40A_SYNY3 HYPOTHETICAL 33.4 KDA PROTEIN SLR0400 >gi|7... 122 6e-27
sp|O67055|Y909_AQUAE HYPOTHETICAL PROTEIN AQ_909 >gi|7429819|pir... 116 4e-25
sp|P57282|Y185_BUCAI HYPOTHETICAL PROTEIN BU185 >gi|10038867|dbj... 115 5e-25
pir||F81155 conserved hypothetical protein NMB0807 [imported] - ... 115 6e-25
emb|CAA65865.1| (X97228) puT [Porphyromonas gingivalis] 112 5e-24
sp|P73955|YE15_SYNY3 HYPOTHETICAL 33.8 KDA PROTEIN SLL1415 >gi|7... 109 3e-23
pir||T08628 hypothetical protein o221 - Escherichia coli (fragme... 108 1e-22
gb|AAD41416.1|AC007727_5 (AC007727) Similar to gb|X84260 POS5 ge... 106 3e-22
pir||T36884 hypothetical protein SCI51.21c - Streptomyces coelic... 105 5e-22
sp|O51291|Y311_BORBU HYPOTHETICAL PROTEIN BB0311 >gi|2688218|gb|... 104 1e-21
gb|AAG20093.1| (AE005089) Vng1900c [Halobacterium sp. NRC-1] 104 1e-21
sp|O83455|Y441_TREPA HYPOTHETICAL PROTEIN TP0441 >gi|7514586|pir... 103 2e-21
sp|Q9X255|YH33_THEMA HYPOTHETICAL PROTEIN TM1733 >gi|7445317|pir... 102 5e-21
pir||T38638 hypothetical protein SPAC323.01c - fission yeast (S... 102 6e-21
sp|O33196|YG95_MYCTU HYPOTHETICAL 32.9 KDA PROTEIN RV1695 >gi|74... 100 2e-20
sp|Q49897|YG95_MYCLE HYPOTHETICAL 33.2 KDA PROTEIN MLC1351.13C >... 96 4e-19
pir||H81412 hypothetical protein Cj0641 [imported] - Campylobact... 96 5e-19
gi|6320794 Yel041wp [Saccharomyces cerevisiae] >gi|418405|sp|P32... 95 8e-19
gb|AAF58355.1| (AE003818) CG6152 gene product [alt 2] [Drosophil... 92 5e-18
gb|AAF58356.1| (AE003818) CG6152 gene product [alt 1] [Drosophil... 92 5e-18
gb|AAF58357.1| (AE003818) CG6152 gene product [alt 3] [Drosophil... 92 5e-18
gi|6322509 involved in ferric reductase activity; Utr1p [Sacchar... 92 7e-18
sp|O25944|YD94_HELPY HYPOTHETICAL PROTEIN HP1394 >gi|7445318|pir... 92 7e-18
gi|6325068 Pos5p [Saccharomyces cerevisiae] >gi|8928263|sp|Q0689... 90 3e-17
emb|CAA59017.1| (X84260) POS5 [Saccharomyces cerevisiae] 89 8e-17
sp|Q9ZJ81|YD94_HELPJ HYPOTHETICAL PROTEIN HP1394/JHP1433 >gi|744... 86 4e-16
pir||T38757 hypothetical protein SPAC3H5.11 - fission yeast (Sc... 83 3e-15
gb|AAK42388.1| Conserved hypothetical protein [Sulfolobus solfat... 77 2e-13
sp|Q9ZDA2|Y440_RICPR HYPOTHETICAL PROTEIN RP440 >gi|7467758|pir|... 73 4e-12
dbj|BAB06567.1| (AP001516) unknown conserved protein [Bacillus h... 72 7e-12
sp|O31612|YJBN_BACSU HYPOTHETICAL 30.0 KDA PROTEIN IN MECA-TENA ... 71 2e-11
pir||T50409 utr1 protein homolog [imported] - fission yeast (Sc... 69 4e-11
>pir||G75138 hypothetical protein PAB1756 - Pyrococcus abyssi (strain Orsay)
>gi|5458335|emb|CAB49824.1| (AJ248285) hypothetical
protein [Pyrococcus abyssi]
Length = 277
Score = 558 bits (1423), Expect = e-158
Identities = 277/277 (100%), Positives = 277/277 (100%)
Query: 1 MRFGIVARRDREEALKLAYRVYDYLKVRGYDAIVDSETYEHFPHFKEEDIAKLEEFDVDF 60
MRFGIVARRDREEALKLAYRVYDYLKVRGYDAIVDSETYEHFPHFKEEDIAKLEEFDVDF
Sbjct: 1 MRFGIVARRDREEALKLAYRVYDYLKVRGYDAIVDSETYEHFPHFKEEDIAKLEEFDVDF 60
Query: 61 IIAIGGDGTILRIEHKTKKDIPILSINMGTLGFLTEVEPSETFFAINRLLRGEYYIDERI 120
IIAIGGDGTILRIEHKTKKDIPILSINMGTLGFLTEVEPSETFFAINRLLRGEYYIDERI
Sbjct: 61 IIAIGGDGTILRIEHKTKKDIPILSINMGTLGFLTEVEPSETFFAINRLLRGEYYIDERI 120
Query: 121 KLRTYINGEARIPDALNEVAILTGIPGKVIHLRYYVDGGLADEVRADGLVVATPTGSTGY 180
KLRTYINGEARIPDALNEVAILTGIPGKVIHLRYYVDGGLADEVRADGLVVATPTGSTGY
Sbjct: 121 KLRTYINGEARIPDALNEVAILTGIPGKVIHLRYYVDGGLADEVRADGLVVATPTGSTGY 180
Query: 181 AMSAGGPFVDPRLDTIIIAPLLPLPRTSVPMVVPGYSKIEIEFVTKREVILAVDGQYYEH 240
AMSAGGPFVDPRLDTIIIAPLLPLPRTSVPMVVPGYSKIEIEFVTKREVILAVDGQYYEH
Sbjct: 181 AMSAGGPFVDPRLDTIIIAPLLPLPRTSVPMVVPGYSKIEIEFVTKREVILAVDGQYYEH 240
Query: 241 LSPDIKIRIEKSPRKTKFVRFTREIYPKYTMRIKERH 277
LSPDIKIRIEKSPRKTKFVRFTREIYPKYTMRIKERH
Sbjct: 241 LSPDIKIRIEKSPRKTKFVRFTREIYPKYTMRIKERH 277
>sp|O58801|YA74_PYRHO HYPOTHETICAL PROTEIN PH1074 >gi|7429818|pir||G71101 hypothetical
protein PH1074 - Pyrococcus horikoshii
>gi|3257490|dbj|BAA30173.1| (AP000004) 277aa long
hypothetical protein [Pyrococcus horikoshii]
Length = 277
Score = 490 bits (1247), Expect = e-137
Identities = 227/277 (81%), Positives = 260/277 (92%)
Query: 1 MRFGIVARRDREEALKLAYRVYDYLKVRGYDAIVDSETYEHFPHFKEEDIAKLEEFDVDF 60
M+FGIVARRD+EEALKLAYRVYD+LKV GY+ +VD ETYEHFPHFKE D+ L+EFDVDF
Sbjct: 1 MKFGIVARRDKEEALKLAYRVYDFLKVHGYEVVVDKETYEHFPHFKEGDVIPLDEFDVDF 60
Query: 61 IIAIGGDGTILRIEHKTKKDIPILSINMGTLGFLTEVEPSETFFAINRLLRGEYYIDERI 120
I+AIGGDGTILRIEH TKKDIPILSINMGTLGFLTEVEPS+TFFA+NRL+ GEYYIDERI
Sbjct: 61 IVAIGGDGTILRIEHMTKKDIPILSINMGTLGFLTEVEPSDTFFALNRLIEGEYYIDERI 120
Query: 121 KLRTYINGEARIPDALNEVAILTGIPGKVIHLRYYVDGGLADEVRADGLVVATPTGSTGY 180
K+RTYI+GE R+PDALNEVAILTGIPGK+IH++YYVDGGLADEVRADGLVV+TPTGSTGY
Sbjct: 121 KVRTYIDGENRVPDALNEVAILTGIPGKIIHMKYYVDGGLADEVRADGLVVSTPTGSTGY 180
Query: 181 AMSAGGPFVDPRLDTIIIAPLLPLPRTSVPMVVPGYSKIEIEFVTKREVILAVDGQYYEH 240
AMSAGGPF+DPRLD I+IAPLLPLP+TSVPMV+PG S+I+I +T RE+ILA+DGQYYEH
Sbjct: 181 AMSAGGPFIDPRLDVILIAPLLPLPKTSVPMVIPGSSRIDIRMLTDREIILAIDGQYYEH 240
Query: 241 LSPDIKIRIEKSPRKTKFVRFTREIYPKYTMRIKERH 277
L P+++I + KSPRKTKF+RFTREIYPKYT+RIKERH
Sbjct: 241 LPPNVEITVVKSPRKTKFIRFTREIYPKYTIRIKERH 277
>sp|O26958|Y872_METTH HYPOTHETICAL PROTEIN MTH872 >gi|7429816|pir||E69216 conserved
hypothetical protein MTH872 - Methanobacterium
thermoautotrophicum (strain Delta H)
>gi|2621965|gb|AAB85370.1| (AE000863) conserved protein
[Methanobacterium thermoautotrophicum]
Length = 283
Score = 230 bits (581), Expect = 1e-59
Identities = 123/279 (44%), Positives = 178/279 (63%), Gaps = 9/279 (3%)
Query: 1 MRFGIVARRDREEALKLAYRVYDYLKVRGYDAIVDSETYEHFPHFKE--EDIAKLEEFDV 58
MR GI+AR D EA+++A RV +L RG + VD + E P +E EDI + D
Sbjct: 2 MRIGIIARFDVAEAVEIAERVASFLLNRGVEITVDLKLTEELPQLREYGEDIRNM---DA 58
Query: 59 DFIIAIGGDGTILRIEHKTK-KDIPILSINMGTLGFLTEVEPSETFFAINRLLRGEYYID 117
D I+ IGGDGTILR + K+IPIL INMGT+GFLTEV+P F A+ +LRGEY ++
Sbjct: 59 DMILTIGGDGTILRTRSLIEDKEIPILGINMGTVGFLTEVDPENVFSALEAVLRGEYAVE 118
Query: 118 ERIKLRTYINGEARIPDALNEVAILTGIPGKVIHLRYYVDGGLADEVRADGLVVATPTGS 177
+R L Y N E +P ALNEV ++T P K++H+ VD + +E+RADG+++ATP+GS
Sbjct: 119 KRTLLSVYHNDE--LPSALNEVVLMTRRPAKMLHIEISVDDEVVEELRADGIIIATPSGS 176
Query: 178 TGYAMSAGGPFVDPRLDTIIIAPLLPLPRTSVPMVVPGYSKIEIEFVTK-REVILAVDGQ 236
T Y+MSAGGP VDPR++ +I P+ P ++ P+VV S I ++ + K ++ I +DGQ
Sbjct: 177 TAYSMSAGGPIVDPRVEAFLIVPICPFKLSARPLVVSNKSVIRVKLLRKGKKAIAVIDGQ 236
Query: 237 YYEHLSPDIKIRIEKSPRKTKFVRFTREIYPKYTMRIKE 275
Y E ++ ++ KS RK FVR +++ Y K ++ E
Sbjct: 237 YEEEINHMDEVIFRKSERKAHFVRLSKDFYRKVREKLIE 275
>pir||E64414 hypothetical protein MJ0917 - Methanococcus jannaschii
Length = 574
Score = 183 bits (461), Expect = 1e-45
Identities = 102/267 (38%), Positives = 159/267 (59%), Gaps = 16/267 (5%)
Query: 1 MRFGIVARRDREEALKLAYRVYDYLKVRGYDAIVDSETYEHFPHFKEEDIAKLEEFDVD- 59
++FGIV R D+EEA+ LA + YLK + V+ F E + ++FD+
Sbjct: 302 VKFGIVVREDKEEAINLAIEICKYLKDKNIPFCVED--------FLRERVGG-DKFDISA 352
Query: 60 --FIIAIGGDGTILRIEHKTKKD-IPILSINMGTLGFLTEVEPSETFFAINRLLRGEYYI 116
IIAIGGDGTILR + IPI+++NMG +GFL E E F I++++ GEY I
Sbjct: 353 ISHIIAIGGDGTILRASRLVNGETIPIIAVNMGKVGFLAEFCKDEVFEIIDKVIYGEYEI 412
Query: 117 DERIKLRTYINGEARI---PDALNEVAILTGIPGKVIHLRYYVDGGLADEVRADGLVVAT 173
++R KL I + R+ P ALNE+ ++T P K++ YV+ L + VRADG++V+T
Sbjct: 413 EKRSKLSCKIIKDNRVIKTPSALNEMVVITKNPAKILEFDVYVNDTLVENVRADGIIVST 472
Query: 174 PTGSTGYAMSAGGPFVDPRLDTIIIAPLLPLPRTSVPMVVPGYSKIEIEFVTKREVILAV 233
PTGST Y++SAGGP V+P +D II+P+ P +S P+V+ ++I+++ ++ +L +
Sbjct: 473 PTGSTAYSLSAGGPIVEPNVDCFIISPICPFKLSSRPLVISASNRIKLKLKLEKPALLVI 532
Query: 234 DGQYYEHLSPDIKIRIEKSPRKTKFVR 260
DG ++ D ++ EKS FV+
Sbjct: 533 DGSVEYEINKDDELIFEKSDSYAYFVK 559
>gb|AAB98922.1| (U67535) conserved hypothetical protein [Methanococcus jannaschii]
Length = 574
Score = 183 bits (461), Expect = 1e-45
Identities = 102/267 (38%), Positives = 159/267 (59%), Gaps = 16/267 (5%)
Query: 1 MRFGIVARRDREEALKLAYRVYDYLKVRGYDAIVDSETYEHFPHFKEEDIAKLEEFDVD- 59
++FGIV R D+EEA+ LA + YLK + V+ F E + ++FD+
Sbjct: 302 VKFGIVVREDKEEAINLAIEICKYLKDKNIPFCVED--------FLRERVGG-DKFDISA 352
Query: 60 --FIIAIGGDGTILRIEHKTKKD-IPILSINMGTLGFLTEVEPSETFFAINRLLRGEYYI 116
IIAIGGDGTILR + IPI+++NMG +GFL E E F I++++ GEY I
Sbjct: 353 ISHIIAIGGDGTILRASRLVNGETIPIIAVNMGKVGFLAEFCKDEVFEIIDKVIYGEYEI 412
Query: 117 DERIKLRTYINGEARI---PDALNEVAILTGIPGKVIHLRYYVDGGLADEVRADGLVVAT 173
++R KL I + R+ P ALNE+ ++T P K++ YV+ L + VRADG++V+T
Sbjct: 413 EKRSKLSCKIIKDNRVIKTPSALNEMVVITKNPAKILEFDVYVNDTLVENVRADGIIVST 472
Query: 174 PTGSTGYAMSAGGPFVDPRLDTIIIAPLLPLPRTSVPMVVPGYSKIEIEFVTKREVILAV 233
PTGST Y++SAGGP V+P +D II+P+ P +S P+V+ ++I+++ ++ +L +
Sbjct: 473 PTGSTAYSLSAGGPIVEPNVDCFIISPICPFKLSSRPLVISASNRIKLKLKLEKPALLVI 532
Query: 234 DGQYYEHLSPDIKIRIEKSPRKTKFVR 260
DG ++ D ++ EKS FV+
Sbjct: 533 DGSVEYEINKDDELIFEKSDSYAYFVK 559
>emb|CAC11761.1| (AL445064) conserved hypothetical protein [Thermoplasma
acidophilum]
Length = 272
Score = 160 bits (400), Expect = 2e-38
Identities = 97/269 (36%), Positives = 150/269 (55%), Gaps = 9/269 (3%)
Query: 1 MRFGIVARRDREEALKLAYRVYDYLKVRGYDAIVDSETYEHFPHFKEEDIAKLEEFDVDF 60
M+ V R+D ++A + D L + ++ I D E + F + K DI+++ D
Sbjct: 1 MKIAFVIRKDCSRCARIAESIIDLLP-KDWEIIYDHEAAK-FLNSKGLDISQIS---ADV 55
Query: 61 IIAIGGDGTILRIEHKTKKDIPILSINMGTLGFLTEVEPSETFFAINRLLRGEYYIDERI 120
II IGGDGT+LR K P+L INMG LGFLTE+E E AI +L++G+Y I E +
Sbjct: 56 IITIGGDGTVLRTLQMAKG--PVLGINMGGLGFLTELEVDEVGSAIFKLIKGQYRITESM 113
Query: 121 KLRTYINGEARIPDALNEVAILTGIPGKVIHLRYYVDGGLADEVRADGLVVATPTGSTGY 180
KL+ ING+ R+ D NE + T ++ + Y+DG +++DG++VATP GS+ Y
Sbjct: 114 KLKVEINGD-RVEDCTNEAVVHTERIARIRQFKIYIDGHFLSTMKSDGIIVATPIGSSSY 172
Query: 181 AMSAGGPFVDPRLDTIIIAPLLPLPRTSVPMVVPGYSKIEIEFVTK-REVILAVDGQYYE 239
+ SAGGP + P L ++I+ L P P+VV S +EI+ + +E IL +DGQ
Sbjct: 173 SSSAGGPLLLPTLKGMVISYLAPYSSRLKPVVVTSDSTVEIKIAGRDQECILILDGQREY 232
Query: 240 HLSPDIKIRIEKSPRKTKFVRFTREIYPK 268
+ +RI +S +F+ F +Y +
Sbjct: 233 TVRSGDTVRISRSENSARFLSFRESVYDR 261
>pir||I64141 hypothetical protein HI0072 - Haemophilus influenzae (strain Rd
KW20)
Length = 285
Score = 147 bits (367), Expect = 2e-34
Identities = 93/264 (35%), Positives = 136/264 (51%), Gaps = 10/264 (3%)
Query: 5 IVARRDREEALKLAYRVYDYLKVRGYDAIVDSETYEHFPHFKEEDIAKLEEFD--VDFII 62
+V + + L++ ++ +L RGY +V+ E E +A LEE I
Sbjct: 13 LVGKPRNDINLQMHKNLFHWLMERGYQVLVEKEVAITL-ELPFEHLATLEEIGHRAQLAI 71
Query: 63 AIGGDGTIL-RIEHKTKKDIPILSINMGTLGFLTEVEPSETFFAINRLL-RGEYYIDERI 120
IGGDG +L R K DIP++ IN G LGFLT+++P + + L RGE++++ER
Sbjct: 72 VIGGDGNMLGRARVLAKYDIPLIGINRGNLGFLTDIDPKNAYSQLEACLERGEFFVEERF 131
Query: 121 KLRTYINGEARIPDALNEVAILTGIPGKVIHL---RYYVDGGLADEVRADGLVVATPTGS 177
L I + I N V P K+ H+ Y++ A R+DGL+V+TPTGS
Sbjct: 132 LLEAKIERASEIVSTSNAVNEAVIHPAKIAHMIDFHVYINDKFAFSQRSDGLIVSTPTGS 191
Query: 178 TGYAMSAGGPFVDPRLDTIIIAPLLPLPRTSVPMVVPGYSKIEIEFVTKREVILAV--DG 235
T Y++SAGGP + P L+ I + P+ P TS P+VV G SKI I F L V D
Sbjct: 192 TAYSLSAGGPILTPNLNAIALVPMFPHTLTSRPLVVDGDSKISIRFAEHNTSQLEVGCDS 251
Query: 236 QYYEHLSPDIKIRIEKSPRKTKFV 259
Q +PD + I+KS K + +
Sbjct: 252 QITLPFTPDDVVHIQKSEHKLRLL 275
>pir||D83259 conserved hypothetical protein PA3088 [imported] - Pseudomonas
aeruginosa (strain PAO1)
>gi|9949197|gb|AAG06476.1|AE004733_3 (AE004733)
conserved hypothetical protein [Pseudomonas aeruginosa]
Length = 295
Score = 146 bits (366), Expect = 2e-34
Identities = 87/266 (32%), Positives = 140/266 (51%), Gaps = 13/266 (4%)
Query: 4 GIVARRDREEALKLAYRVYDYLKVRGYDAIVDSETYEHFP-HFKEEDIAKLEEFDVDFII 62
GI+ R + L R+ +L R I++ E P H + K+ D ++
Sbjct: 8 GIIGRLGSTQVLDTIRRLKKFLIDRHLHVILEDTIAEVLPGHGLQTCSRKIMGEICDLVV 67
Query: 63 AIGGDGTILRIEHK-TKKDIPILSINMGTLGFLTEVEPSETFFAINRLLRGEYYIDERIK 121
+GGDG++L + +P+L IN G+LGFLT++ P E + +L G+Y ++ R
Sbjct: 68 VVGGDGSMLGAARALARHKVPVLGINRGSLGFLTDIRPDELEAKVGEVLDGQYIVESRFL 127
Query: 122 LRTYIN------GEARIPDALNEVAILTGIPGKVIHLRYYVDGGLADEVRADGLVVATPT 175
L + G+ DALN+V + G ++I Y+DG +ADGL+VATPT
Sbjct: 128 LDAQVRRGIDSMGQG---DALNDVVLHPGKSTRMIEFELYIDGQFVCSQKADGLIVATPT 184
Query: 176 GSTGYAMSAGGPFVDPRLDTIIIAPLLPLPRTSVPMVVPGYSKIEIEFVTKREVI--LAV 233
GST YA+SAGGP + P+LD I+I P+ P +S P+VV G S+++I ++ ++
Sbjct: 185 GSTAYALSAGGPIMHPKLDAIVIVPMYPHMLSSRPIVVDGNSELKIVVSPNMQIYPQVSC 244
Query: 234 DGQYYEHLSPDIKIRIEKSPRKTKFV 259
DGQ + +P + I K P+K + +
Sbjct: 245 DGQNHFTCAPGDTVTISKKPQKLRLI 270
>sp|P44497|YFJB_HAEIN PROTEIN HI0072 >gi|1573020|gb|AAC21749.1| (U32692) conserved
hypothetical protein [Haemophilus influenzae Rd]
Length = 261
Score = 145 bits (363), Expect = 5e-34
Identities = 91/248 (36%), Positives = 129/248 (51%), Gaps = 10/248 (4%)
Query: 21 VYDYLKVRGYDAIVDSETYEHFPHFKEEDIAKLEEFD--VDFIIAIGGDGTIL-RIEHKT 77
++ +L RGY +V+ E E +A LEE I IGGDG +L R
Sbjct: 5 LFHWLMERGYQVLVEKEVAITL-ELPFEHLATLEEIGHRAQLAIVIGGDGNMLGRARVLA 63
Query: 78 KKDIPILSINMGTLGFLTEVEPSETFFAINRLL-RGEYYIDERIKLRTYINGEARIPDAL 136
K DIP++ IN G LGFLT+++P + + L RGE++++ER L I + I
Sbjct: 64 KYDIPLIGINRGNLGFLTDIDPKNAYSQLEACLERGEFFVEERFLLEAKIERASEIVSTS 123
Query: 137 NEVAILTGIPGKVIHL---RYYVDGGLADEVRADGLVVATPTGSTGYAMSAGGPFVDPRL 193
N V P K+ H+ Y++ A R+DGL+V+TPTGST Y++SAGGP + P L
Sbjct: 124 NAVNEAVIHPAKIAHMIDFHVYINDKFAFSQRSDGLIVSTPTGSTAYSLSAGGPILTPNL 183
Query: 194 DTIIIAPLLPLPRTSVPMVVPGYSKIEIEFVTKREVILAV--DGQYYEHLSPDIKIRIEK 251
+ I + P+ P TS P+VV G SKI I F L V D Q +PD + I+K
Sbjct: 184 NAIALVPMFPHTLTSRPLVVDGDSKISIRFAEHNTSQLEVGCDSQITLPFTPDDVVHIQK 243
Query: 252 SPRKTKFV 259
S K + +
Sbjct: 244 SEHKLRLL 251
>pir||H82272 conserved hypothetical protein VC0853 [imported] - Vibrio cholerae
(group O1 strain N16961) >gi|9655305|gb|AAF94015.1|
(AE004170) conserved hypothetical protein [Vibrio
cholerae]
Length = 294
Score = 133 bits (331), Expect = 3e-30
Identities = 80/263 (30%), Positives = 129/263 (48%), Gaps = 8/263 (3%)
Query: 5 IVARRDREEALKLAYRVYDYLKVRGYDAIVDSETYEHFPHFKEEDIAKLEEFD--VDFII 62
I+ + ++A++ +Y +L+ GY +D E E A L E D I
Sbjct: 10 IIGKPRDQQAIQTHKEIYHWLRSLGYTVFIDDRLREILTDLPTEHFASLIELGKKADLAI 69
Query: 63 AIGGDGTILRIEHKTKK-DIPILSINMGTLGFLTEVEPSETFFAINRLLRGEYYIDERIK 121
+GGDG +L + DI ++ +N G LGFLT++ P + + +L G Y + R
Sbjct: 70 VVGGDGNMLGAARVLSRFDISVIGVNRGNLGFLTDLNPEDFQQRLQEVLDGHYLQETRFL 129
Query: 122 LRTYINGEARIPD---ALNEVAILTGIPGKVIHLRYYVDGGLADEVRADGLVVATPTGST 178
L I+ ++ ALNE + G +I Y+D A R+DGL+V+TPTGST
Sbjct: 130 LEAEIHRHGQVKSHNAALNEAVLHPGKIAHMIEFEVYIDDNFAFSQRSDGLIVSTPTGST 189
Query: 179 GYAMSAGGPFVDPRLDTIIIAPLLPLPRTSVPMVVPGYSKIEIEFVTKREVI--LAVDGQ 236
Y++S GGP + P L+ I + P+ P + P+VV G +I++ + ++ DGQ
Sbjct: 190 AYSLSGGGPILSPSLNAITLVPMFPHTLSCRPLVVGGNQRIKLVVSPENRGTQEVSCDGQ 249
Query: 237 YYEHLSPDIKIRIEKSPRKTKFV 259
+SP +I I +SP K +
Sbjct: 250 VSLPVSPGDEIHIYQSPNVLKLI 272
>sp|P37768|YFJB_ECOLI HYPOTHETICAL 32.6 KDA PROTEIN IN GRPE-RECN INTERGENIC REGION
>gi|7429817|pir||B65040 yfjB protein - Escherichia coli
(strain K-12) >gi|1788968|gb|AAC75664.1| (AE000347) orf,
hypothetical protein [Escherichia coli K12]
>gi|1800020|dbj|BAA16500.1| (D90888) similar to
[SwissProt Accession Number P37768] [Escherichia coli]
Length = 292
Score = 128 bits (319), Expect = 7e-29
Identities = 78/240 (32%), Positives = 123/240 (50%), Gaps = 8/240 (3%)
Query: 4 GIVARRDREEALKLAYRVYDYLKVRGYDAIVDSETYEHFPHFKEEDIAKLEEFD--VDFI 61
GIV AL +Y +L +GY+ IV+ + H K L E D
Sbjct: 9 GIVGHPRHPTALTTHEMLYRWLCTKGYEVIVEQQI-AHELQLKNVKTGTLAEIGQLADLA 67
Query: 62 IAIGGDGTILRIEHKTKK-DIPILSINMGTLGFLTEVEPSETFFAINRLLRGEYYIDERI 120
+ +GGDG +L + DI ++ IN G LGFLT+++P + +L G Y ++R
Sbjct: 68 VVVGGDGNMLGAARTLARYDIKVIGINRGNLGFLTDLDPDNAQQQLADVLEGHYISEKRF 127
Query: 121 KLRTYI---NGEARIPDALNEVAILTGIPGKVIHLRYYVDGGLADEVRADGLVVATPTGS 177
L + + + RI A+NEV + G +I Y+D A R+DGL+++TPTGS
Sbjct: 128 LLEAQVCQQDCQKRISTAINEVVLHPGKVAHMIEFEVYIDEIFAFSQRSDGLIISTPTGS 187
Query: 178 TGYAMSAGGPFVDPRLDTIIIAPLLPLPRTSVPMVVPGYSKIEIEFVTKR-EVILAVDGQ 236
T Y++SAGGP + P LD I + P+ P ++ P+V+ S I + F +R ++ ++ D Q
Sbjct: 188 TAYSLSAGGPILTPSLDAITLVPMFPHTLSARPLVINSSSTIRLRFSHRRNDLEISCDSQ 247
>gi|11499950 conserved hypothetical protein [Archaeoglobus fulgidus]
>gi|8480649|sp|O30297|YN73_ARCFU HYPOTHETICAL PROTEIN
AF2373 >gi|7483250|pir||E69546 conserved hypothetical
protein AF2373 - Archaeoglobus fulgidus
>gi|2650718|gb|AAB91287.1| (AE001112) conserved
hypothetical protein [Archaeoglobus fulgidus]
Length = 249
Score = 125 bits (310), Expect = 7e-28
Identities = 85/203 (41%), Positives = 112/203 (54%), Gaps = 15/203 (7%)
Query: 52 KLEEFDVDFIIAIGGDGTILRIEHKTKKDIPILSINMGTLGFLTEVEPSETFFAINRLLR 111
+LE FD FI+++GGDGTILRI K K+ PI IN G +G LT P F +
Sbjct: 36 ELENFD--FIVSVGGDGTILRILQKLKRCPPIFGINTGRVGLLTHASPEN--FEVELKKA 91
Query: 112 GEYYIDERIKLRTYINGEARIPD--ALNEVAILTGIPGKVIHLRYYVDGGLADEVRADGL 169
E + ER + + +PD ALNE+A+L+ P K+I + VDG D +R DG
Sbjct: 92 VEKFEVERFPRVSC----SAMPDVLALNEIAVLSRKPAKMIDVALRVDGVEVDRIRCDGF 147
Query: 170 VVATPTGSTGYAMSAGGPFVDPRLDTIIIAPLLPLPRTSVPMVVPGYSKIEIEFVTKREV 229
+VAT GSTGYA SAGGP V+P L+ I+ P+ P P VV KIE V +
Sbjct: 148 IVATQIGSTGYAFSAGGPVVEPYLECFILIPIAPFRFGWKPYVVSMERKIE---VIAEKA 204
Query: 230 ILAVDGQYYEHLSPDIKIRIEKS 252
I+ DGQ + + D +I IEKS
Sbjct: 205 IVVADGQ--KSVDFDGEITIEKS 225
>sp|Q9YD08|YB04_AERPE HYPOTHETICAL PROTEIN APE1104 >gi|7445315|pir||A72711 hypothetical
protein APE1104 - Aeropyrum pernix (strain K1)
>gi|5104774|dbj|BAA80089.1| (AP000060) 291aa long
hypothetical protein [Aeropyrum pernix]
Length = 291
Score = 122 bits (303), Expect = 5e-27
Identities = 86/266 (32%), Positives = 135/266 (50%), Gaps = 17/266 (6%)
Query: 4 GIVARRDREEALKLAYRVYDYLKVRGYDAIVDSETYEH-----FPHFKEEDIAKLEEFDV 58
G+V +R A +A V L G + +VD ET ++ FP F +
Sbjct: 17 GLVVKRRSGIAEDVARLVVKELVESGVEVLVD-ETVDYPSLSGFPRFS------ISRDPP 69
Query: 59 DFIIAIGGDGTILRIEHKT-KKDIPI-LSINMGTLGFLTEVEPSETFFAINRLLRGEYYI 116
++ +GGDGT+LR + +++ P+ ++I G GFL +VE E + L G +
Sbjct: 70 GRVVVVGGDGTLLRTFLRLGERESPLFMTIKAGKKGFLLDVERYEAVERLRDFLEGRFRE 129
Query: 117 DERIKLRTYINGEARIPDALNEVAILTGIPGKVIHLRYYVDGGLADEVRADGLVVATPTG 176
+ R Y+ GEAR N+ A+ T K+ + +VDG LA + DG+VV+T G
Sbjct: 130 VVYPRYRVYLEGEARAC-MFNDTAV-TANNAKMARVHVFVDGDLAMNIDGDGVVVSTTAG 187
Query: 177 STGYAMSAGGPFVDPRLDTIIIAPLLPLPRTSVPMVVPGYSKIEIE-FVTKREVILAVDG 235
ST Y++S GGP +DPRLD I++ PL P+ +VVP S++ +E V +++ +DG
Sbjct: 188 STAYSLSGGGPIIDPRLDVIVLTPLNPVQLFLRSIVVPSGSRVTVEASVYSNPLVVNIDG 247
Query: 236 QYYEHLSPDIKIRIEKSPRKTKFVRF 261
QY L P + IE+ + RF
Sbjct: 248 QYVYELEPGGIVDIERCGSGVRIARF 273
>sp|P74430|Y40A_SYNY3 HYPOTHETICAL 33.4 KDA PROTEIN SLR0400 >gi|7445320|pir||S76401
hypothetical protein - Synechocystis sp. (strain PCC
6803) >gi|1653618|dbj|BAA18530.1| (D90915) hypothetical
protein [Synechocystis sp.]
Length = 305
Score = 122 bits (302), Expect = 6e-27
Identities = 81/282 (28%), Positives = 135/282 (47%), Gaps = 32/282 (11%)
Query: 2 RFGIVARRDREEALKLAYRVYDYLKVRGYDAIVDSET-----------------YEHF-- 42
+ GI+ D+ A +A + + L+ G+ +++ + EH
Sbjct: 3 KVGIIFNDDKPTACSVAQELQEQLQQSGFTVAMETGSGGLLGYSQPDRPICHTRIEHLTP 62
Query: 43 PHFKEEDIAKLEEFDVDFIIAIGGDGTILR-IEHKTKKDIPILSINMGTLGFLTEVEPSE 101
PHF E + F I +GGDGT+L IP+L+IN G +GFLTE+ ++
Sbjct: 63 PHFDES---------MPFAIVLGGDGTVLSAFRQLAPLGIPLLTINTGHMGFLTEIYLNQ 113
Query: 102 TFFAINRLLRGEYYIDERIKLRTYINGEARI---PDALNEVAILTGIPGKVIHLRYYVDG 158
AI +L+ G+Y I+ R + + E + +LNE+ + + H V
Sbjct: 114 LPTAIEQLINGDYQIESRSMMTVRLMREENLLWEALSLNEMVLHREPLTSMCHFEIQVGY 173
Query: 159 GLADEVRADGLVVATPTGSTGYAMSAGGPFVDPRLDTIIIAPLLPLPRTSVPMVVPGYSK 218
+ ++ ADG++V+TPTGST Y++SAGGP V P + +AP+ P S +V
Sbjct: 174 HASVDIAADGIIVSTPTGSTAYSLSAGGPVVTPDVPVFQLAPICPHSLASRALVFSDLEP 233
Query: 219 IEIEFVTKREVILAVDGQYYEHLSPDIKIRIEKSPRKTKFVR 260
+ I T ++L VDG ++ P+ ++ + KSP KF+R
Sbjct: 234 VTIFPATPNRMVLVVDGNGGCYVLPEDRVHLSKSPYPAKFIR 275
>sp|O67055|Y909_AQUAE HYPOTHETICAL PROTEIN AQ_909 >gi|7429819|pir||D70378 conserved
hypothetical protein aq_909 - Aquifex aeolicus
>gi|2983444|gb|AAC07026.1| (AE000713) hypothetical
protein [Aquifex aeolicus]
Length = 274
Score = 116 bits (287), Expect = 4e-25
Identities = 67/227 (29%), Positives = 119/227 (51%), Gaps = 14/227 (6%)
Query: 46 KEEDIAKLEEFDVDFIIAIGGDGTILRIEHKTKK-DIPILSINMGTLGFLTEVEPSETFF 104
++E L+ D + + IGGDGT L + +P++ +N G GFLTE++ E
Sbjct: 38 RKELFKVLKPKDYELFLVIGGDGTFLSAARIASRFGVPLVGVNEGRFGFLTEIKKEEIKK 97
Query: 105 AINRLLRGEYYIDERIKLRTYINGEARIP---DALNEVAILTGIPGKVIHLRYYVDGGLA 161
+ +L G + ER+ + Y+ R+ + LN+ I ++I + +++G
Sbjct: 98 VLPLVLEGRAKLQERLMIDVYLRSRNRLRYLGNYLNDAVISKSSIARIIRTKVFINGEEV 157
Query: 162 DEVRADGLVVATPTGSTGYAMSAGGPFVDPRLDTIIIAPLLPLPRTSVPMVVPGYSKIEI 221
EV DG++++TPTGST YA+SAGGP V P ++ P+ P ++ P+V+P +++
Sbjct: 158 LEVFGDGVILSTPTGSTAYALSAGGPIVYPESQNLLFVPICPHTLSNRPLVLPSKFEVKF 217
Query: 222 EFVTKR-EVILAVDGQYYEHLSPDIKIRIEKS---------PRKTKF 258
+ V++ E L +DGQ HL ++ +++S PRK+ F
Sbjct: 218 KVVSENMEAFLTLDGQEGFHLKKGDEVIVKRSRYVCRMYSHPRKSFF 264
>sp|P57282|Y185_BUCAI HYPOTHETICAL PROTEIN BU185 >gi|10038867|dbj|BAB12902.1| (AP001118)
hypothetical protein [Buchnera sp. APS]
Length = 292
Score = 115 bits (286), Expect = 5e-25
Identities = 74/226 (32%), Positives = 114/226 (49%), Gaps = 7/226 (3%)
Query: 4 GIVARRDREEALKLAYRVYDYLKVRGYDAIVDSETYEHFPHFKEEDIAKLEEFD--VDFI 61
GIV R + AL +Y++L GY ++ T + A L E D
Sbjct: 9 GIVGRPRHDSALITHKTLYEWLIKNGYKVFIE-HTVARELKLNNPNTATLIEIGEFCDLA 67
Query: 62 IAIGGDGTILRIEHKTK-KDIPILSINMGTLGFLTEVEPSETFFAINRLLRGEYYIDERI 120
+ IGGDG +L +I I+ IN G LGFL ++ P ++ +L G Y ++ R
Sbjct: 68 VVIGGDGNLLCAARVLSFYNIKIIGINRGNLGFLADLNPDTGLKKLSEVLSGNYSLENRF 127
Query: 121 KLRTYINGE---ARIPDALNEVAILTGIPGKVIHLRYYVDGGLADEVRADGLVVATPTGS 177
L + + +R A+NEV + T +I Y+D + RADGL+V+TPTGS
Sbjct: 128 LLDAQVCQKKIISRSSIAINEVVLHTKNLAHMIEFEVYIDNKFSFSQRADGLIVSTPTGS 187
Query: 178 TGYAMSAGGPFVDPRLDTIIIAPLLPLPRTSVPMVVPGYSKIEIEF 223
TGY++SAGGP + LD I++ P+ P ++ P+V+ S I ++F
Sbjct: 188 TGYSLSAGGPIIAASLDAIVLVPMFPHTLSARPLVIHSDSIICLKF 233
>pir||F81155 conserved hypothetical protein NMB0807 [imported] - Neisseria
meningitidis (group B strain MD58, group A strain Z2491)
>gi|7226041|gb|AAF41220.1| (AE002434) conserved
hypothetical protein [Neisseria meningitidis MC58]
>gi|7379719|emb|CAB84286.1| (AL162754) hypothetical
protein NMA1017 [Neisseria meningitidis Z2491]
Length = 296
Score = 115 bits (285), Expect = 6e-25
Identities = 70/244 (28%), Positives = 123/244 (49%), Gaps = 12/244 (4%)
Query: 4 GIVARRDREEALKLAYRVYDYLKVRGYDAIVDSETYEHFPHFKEEDIA-------KLEEF 56
GIV R + + A+ + +LK G+ +D + + ++ + +L ++
Sbjct: 9 GIVTRPNTPDIQDTAHTLITFLKQHGFTVYLDEVGIKEGCIYTQDTVGCHIVNKTELGQY 68
Query: 57 DVDFIIAIGGDGTILRIEHKTK-KDIPILSINMGTLGFLTEVEPSETFFAINRLLRGEYY 115
D + +GGDGT L + + + +PI+ IN G LGFLT++ + +L G+Y
Sbjct: 69 -CDLVAVLGGDGTFLSVAREIALRAVPIIGINQGHLGFLTQIPREYMTDKLLPVLEGKYL 127
Query: 116 IDERIKLRTYINGEARIPD---ALNEVAILTGIPGKVIHLRYYVDGGLADEVRADGLVVA 172
+ERI + + E + + ALN+ + G G++I +V+ R+DGL+V+
Sbjct: 128 AEERILIEAALIREGKTAERAIALNDAVLSRGGAGQMIEFEVFVNREFVYTQRSDGLIVS 187
Query: 173 TPTGSTGYAMSAGGPFVDPRLDTIIIAPLLPLPRTSVPMVVPGYSKIEIEFVTKREVILA 232
TPTGST Y+++AGGP + L + P+ P T+ P+ +P S+IEI + +
Sbjct: 188 TPTGSTAYSLAAGGPIMQAGLHAFTLVPICPQSMTNRPIAIPDTSEIEILVTQGGDARVH 247
Query: 233 VDGQ 236
DGQ
Sbjct: 248 FDGQ 251
>emb|CAA65865.1| (X97228) puT [Porphyromonas gingivalis]
Length = 288
Score = 112 bits (277), Expect = 5e-24
Identities = 70/205 (34%), Positives = 110/205 (53%), Gaps = 3/205 (1%)
Query: 58 VDFIIAIGGDGTILRIEHKTKKDIPIL-SINMGTLGFLTEVEPSETFFAINRLLRGEYYI 116
+D++I +GGDGT LR K+ + ++N G LGFLT+V+ E I RLL G++ I
Sbjct: 64 IDYVICMGGDGTFLRTAIKSAFRRSLSWAVNTGRLGFLTDVDCHEASELITRLLDGDFTI 123
Query: 117 DERIKLRTYINGEARIPDALNEVAILTGIPGKVIHLRYYVDGGLADEVRADGLVVATPTG 176
+ R L + + ALNE AIL G +I + ++ ADGLVVATP+G
Sbjct: 124 ETRSLLEVTEDNGSSPSYALNEAAILKRETGSMIRVNACLNDDYLAAYDADGLVVATPSG 183
Query: 177 STGYAMSAGGPFVDPRLDTIIIAPLLPLPRTSVPMVVPGYSKIEIEFVTK-REVILAVDG 235
ST Y++S GP + P ++ P+ P P+VVP + I +E ++ R +L +DG
Sbjct: 184 STAYSLSGNGPIIMPACRNFVLTPIAPHSLNMRPLVVPDDTVIRLEVDSRSRNYLLVLDG 243
Query: 236 QYYEHLSPDIKIRIEKSPRKTKFVR 260
+ L D I ++++P + +R
Sbjct: 244 R-TRTLPCDTSILLKRAPHTLRMIR 267
>sp|P73955|YE15_SYNY3 HYPOTHETICAL 33.8 KDA PROTEIN SLL1415 >gi|7445321|pir||S75461
hypothetical protein sll1415 - Synechocystis sp. (strain
PCC 6803) >gi|1653106|dbj|BAA18022.1| (D90911)
hypothetical protein [Synechocystis sp.]
Length = 307
Score = 109 bits (271), Expect = 3e-23
Identities = 86/240 (35%), Positives = 125/240 (51%), Gaps = 30/240 (12%)
Query: 58 VDFIIAIGGDGTILRI-EHKTKKDIPILSINMGT-LGFLTEVEP--SETFFAINRLLRGE 113
+D + +GGDGT L H + + IPILS+N+G LGFLTE +T +RL +
Sbjct: 58 IDLALVLGGDGTTLAAARHLSPEGIPILSVNVGGHLGFLTEPFDVFQDTQKVWDRLNQDR 117
Query: 114 YYIDERIKLRTYI-NGEARIPD-------ALNEVAI----LTGIPGKVIHLRYYVDGGLA 161
Y + +R+ L + G+ R P LNE+ I + +P +I + VDG L
Sbjct: 118 YAVSQRMMLAASLFEGDRRDPQMVGETYYCLNEMCIKPASIDRMPTAIIEVE--VDGELI 175
Query: 162 DEVRADGLVVATPTGSTGYAMSAGGPFVDPRLDTIIIAPLLPLPRTSVPMVVPGYSKIEI 221
D+ + DGL+VATPTGST Y SA GP + P +D I+I P+ PL +S P+V+P S + I
Sbjct: 176 DQYQCDGLLVATPTGSTCYTSSANGPILHPGMDAIVITPICPLSLSSRPIVIPPGSSVNI 235
Query: 222 ------EFVTKREVILAVDGQYYEHLSPDIKIRIEKSPRKTKFVRFTREIYPKY-TMRIK 274
E TK L DG + P ++ + + R +F+ RE Y Y T+R K
Sbjct: 236 WPLGDFELNTK----LWTDGSLATGVWPGQRVGVWMAHRAAQFI-LLRESYSFYKTLRDK 290
>pir||T08628 hypothetical protein o221 - Escherichia coli (fragment)
>gi|1033111|gb|AAA79785.1| (U36840) ORF_o221
[Escherichia coli]
Length = 220
Score = 108 bits (266), Expect = 1e-22
Identities = 55/151 (36%), Positives = 86/151 (56%), Gaps = 3/151 (1%)
Query: 80 DIPILSINMGTLGFLTEVEPSETFFAINRLLRGEYYIDERIKLRTYI---NGEARIPDAL 136
DI ++ IN G LGFLT+++P + +L G Y ++R L + + + RI A+
Sbjct: 15 DIKVIGINRGNLGFLTDLDPDNAQQQLADVLEGHYISEKRFLLEAQVCQQDCQKRISTAI 74
Query: 137 NEVAILTGIPGKVIHLRYYVDGGLADEVRADGLVVATPTGSTGYAMSAGGPFVDPRLDTI 196
NEV + G +I Y+D A R+DGL+++TPTGST Y++SAGGP + P LD I
Sbjct: 75 NEVVLHPGKVAHMIEFEVYIDEIFAFSQRSDGLIISTPTGSTAYSLSAGGPILTPSLDAI 134
Query: 197 IIAPLLPLPRTSVPMVVPGYSKIEIEFVTKR 227
+ P+ P ++ P+V+ S I + F +R
Sbjct: 135 TLVPMFPHTLSARPLVINSSSTIRLRFSHRR 165
>gb|AAD41416.1|AC007727_5 (AC007727) Similar to gb|X84260 POS5 gene product from
Saccharomyces cerevisiae. EST gb|W43879 comes from this
gene. [Arabidopsis thaliana]
Length = 868
Score = 106 bits (262), Expect = 3e-22
Identities = 81/264 (30%), Positives = 134/264 (50%), Gaps = 28/264 (10%)
Query: 12 EEALKLAYRVYDYLKVRGYDAIVDSETYEHFPH---------FKEEDIAKLEEFDVDFII 62
EEA + A +Y + +V+ E ++ F F +D + L E VDF+
Sbjct: 575 EEAKEAASFLYHQ---ENMNVLVEPEVHDVFARIPGFGFVQTFYIQDTSDLHE-RVDFVA 630
Query: 63 AIGGDGTILRIEHKTKKDIP-ILSINMGTLGFLTEVEPSETFFA-INRLLRGE-----YY 115
+GGDG IL + K +P ++S N+G+LGFLT P E F + R++ G Y
Sbjct: 631 CLGGDGVILHASNLFKGAVPPVVSFNLGSLGFLTS-HPFEDFRQDLKRVIHGNNTLDGVY 689
Query: 116 IDERIKLRT--YINGEA---RIPDALNEVAILTGIPGKVIHLRYYVDGGLADEVRADGLV 170
I R++LR Y G+A ++ D LNE+ + G + + Y L +V+ DG++
Sbjct: 690 ITLRMRLRCEIYRKGKAMPGKVFDVLNEIVVDRGSNPYLSKIECYEHDRLITKVQGDGVI 749
Query: 171 VATPTGSTGYAMSAGGPFVDPRLDTIIIAPLLPLPRTSVPMVVPGYSKIEIEFV--TKRE 228
VATPTGST Y+ +AGG V P + ++ P+ P + P+++P +K+E++ +
Sbjct: 750 VATPTGSTAYSTAAGGSMVHPNVPCMLFTPICPHSLSFRPVILPDSAKLELKIPDDARSN 809
Query: 229 VILAVDGQYYEHLSPDIKIRIEKS 252
++ DG+ + LS +RI S
Sbjct: 810 AWVSFDGKRRQQLSRGDSVRIYMS 833
>pir||T36884 hypothetical protein SCI51.21c - Streptomyces coelicolor
>gi|5738497|emb|CAB52845.1| (AL109848) hypothetical
protein [Streptomyces coelicolor A3(2)]
Length = 301
Score = 105 bits (260), Expect = 5e-22
Identities = 65/225 (28%), Positives = 115/225 (50%), Gaps = 10/225 (4%)
Query: 59 DFIIAIGGDGTILR-IEHKTKKDIPILSINMGTLGFLTEVEPSETFFAINRLLRGEYYID 117
+ +I +GGDGT+LR E +P+L +N+G +GFL E E + ++R++ Y ++
Sbjct: 69 ELLIVLGGDGTLLRGAEFARASGVPMLGVNLGRVGFLAEAERDDLDKVVDRVVNRAYEVE 128
Query: 118 ERIKLRTYI--NGEARIPD-ALNEVAILTGIPGKVIHLRYYVDGGLADEVRADGLVVATP 174
ER+ + + NG+ D ALNE A+ K++ + +DG DG+V++TP
Sbjct: 129 ERMTVDVVVHRNGDIVHTDWALNEAAVQKAGAEKLLEVVLEIDGRPVTGFGCDGIVLSTP 188
Query: 175 TGSTGYAMSAGGPFVDPRLDTIIIAPLLPLPRTSVPMVVPGYSKIEIEFVTK-REVILAV 233
TGST YA SAGGP V P ++ +++ P+ + P+V S + +E + +L
Sbjct: 189 TGSTAYAFSAGGPVVWPEVEALLMVPISAHALFAKPLVTSPDSVLAVEVLPHVPPGVLWC 248
Query: 234 DGQYYEHLSPDIKIRIEKSPRKTKFVR-----FTREIYPKYTMRI 273
DG+ L P ++ + + + R FT + K+ + +
Sbjct: 249 DGRRTVELPPGARVEVRRGAVPVRLARLHHASFTDRLVAKFALPV 293
>sp|O51291|Y311_BORBU HYPOTHETICAL PROTEIN BB0311 >gi|2688218|gb|AAC66699.1| (AE001138)
conserved hypothetical protein [Borrelia burgdorferi]
Length = 293
Score = 104 bits (257), Expect = 1e-21
Identities = 64/219 (29%), Positives = 111/219 (50%), Gaps = 10/219 (4%)
Query: 60 FIIAIGGDGTILR----IEHKTKKDIPILSINMGTLGFLTEVEPSETFFAINRLLRGEYY 115
F+I +GGDGT+L + DIPI+SINMG +GFL +++ + I+R
Sbjct: 68 FLITLGGDGTVLLAVNLLLENENIDIPIISINMGNVGFLADIKIEDFKKVIDRFFNNSLV 127
Query: 116 IDERIKLRTYINGEAR---IPDALNEVAILTGIPGKVIHLRYYVDGGLADEVRADGLVVA 172
I+++ L ++ + ALN++ I + + K+I++ V+ ++DG++V+
Sbjct: 128 INKKFLLHVTVSQHGKDLISKYALNDIIIRSSVLNKMIYVDLMVNSESFLSYKSDGIIVS 187
Query: 173 TPTGSTGYAMSAGGPFVDPRLDTIIIAPLLPLPRTSVPMVVPGYSKIEIEFVTKREVILA 232
TPTGSTGY+ SAGGP ++ L+ + P+ P + V SK+ I F + + A
Sbjct: 188 TPTGSTGYSFSAGGPILEADLEGFXLTPISPHSVYNRSFVFSKLSKLSISFSKEYFIAAA 247
Query: 233 ---VDGQYYEHLSPDIKIRIEKSPRKTKFVRFTREIYPK 268
+DG + D+ + S + FV F + + K
Sbjct: 248 SIFLDGINFGSFGVDVVFEFKISSQSLNFVSFCTDTFVK 286
>gb|AAG20093.1| (AE005089) Vng1900c [Halobacterium sp. NRC-1]
Length = 282
Score = 104 bits (257), Expect = 1e-21
Identities = 84/262 (32%), Positives = 126/262 (48%), Gaps = 17/262 (6%)
Query: 1 MRFGIVARRDREEALKLAYRVYDYLKVRGYDAIVDSETYEHFPHFKEEDIAKLEEFDVDF 60
M GIVA+R E A LA + + L+ VD+ T E E D D
Sbjct: 1 MHVGIVAQRGNERATSLAGEIREQLRALEVTVWVDTATAEALACAGECGRDTTAFTDCDL 60
Query: 61 IIAIGGDGTILRIEHKTKKDIPILSINMGTLGFLTEVEPSETFFAINRLLR-----GEYY 115
+++IGGDGT L + PIL +N+G +GFL V P++ A+ + G
Sbjct: 61 VVSIGGDGTFL-FAARGAGATPILGVNLGEVGFLNAVAPADAVEAVREEVNRYRETGAVR 119
Query: 116 IDERIKLRTYINGEARIPDALNEVAILTGIPGKV--IHLRYYVDGGLADEVRADGLVVAT 173
E ++ +G A P ALNEVAI G + + VDG + RADG++VAT
Sbjct: 120 CREVPRVVAAGDGWASTP-ALNEVAIQGEQRGHGHGVAVDVRVDGSQYEATRADGVLVAT 178
Query: 174 PTGSTGYAMSAGGPFVDPRLDTIIIAPLLPLPRTSVPMVVPGY-SKIEIEFVT-----KR 227
PTGST Y +S GGP V P +D +++ + ++P +V G S+I I T +
Sbjct: 179 PTGSTAYNLSEGGPLVQPSVDALVVTEM--CGADALPPLVTGLDSEIRIRVETLDDGGEG 236
Query: 228 EVILAVDGQYYEHLSPDIKIRI 249
V++A DG + P +++ +
Sbjct: 237 RVVVASDGGRLTRVDPPVEMTV 258
>sp|O83455|Y441_TREPA HYPOTHETICAL PROTEIN TP0441 >gi|7514586|pir||A71324 conserved
hypothetical protein TP0441 - syphilis spirochete
>gi|3322726|gb|AAC65428.1| (AE001221) conserved
hypothetical protein [Treponema pallidum]
Length = 305
Score = 103 bits (255), Expect = 2e-21
Identities = 77/262 (29%), Positives = 127/262 (48%), Gaps = 14/262 (5%)
Query: 11 REEALKLAYRVYDYLKVRGYDAIVDSETYEHFPHFKEEDIAKLEEFDVDFIIAIGGDGTI 70
+ A LA V ++L +RG+ T E + +E A+ F ++IGGDGT
Sbjct: 28 KPRAAVLAADVVNFLSIRGFQC----HTIE-YDGLNKESCARAGYM---FAVSIGGDGTT 79
Query: 71 LRIEH-KTKKDIPILSINMGTLGFLTEVEPSETFFAINRLLRGEYYIDERIKLR---TYI 126
L + IPIL+IN+G GF+ +EP A++ L G ER + T
Sbjct: 80 LFAARCASPSGIPILAINLGRFGFIAPIEPRYWQQALSDYLAGGVRPAERALISCTVTRA 139
Query: 127 NGEARIPDALNEVAILTGIPGKVIHLRYYVDGGLADEVRADGLVVATPTGSTGYAMSAGG 186
E ALN+V + +G ++ + ADG+++ATPTGST Y+ + GG
Sbjct: 140 GKEIASCLALNDVVLSSGRVARLTRAEVCFNDISFGVYEADGIILATPTGSTAYSAACGG 199
Query: 187 PFVDPRLDTIIIAPLLPLPRTSVPMVVP--GYSKIEIEFVTKREVILAVDGQYYEHLSPD 244
P +DP LD ++ P+ L ++ P+VVP G +I++ + +E +L+VDG L +
Sbjct: 200 PILDPDLDAFVLTPISALCLSNRPVVVPSSGVVRIKVLSMRHKETVLSVDGHELCTLQEE 259
Query: 245 IKIRIEKSPRKTKFVRFTREIY 266
++ +S + V T ++
Sbjct: 260 DQLLASRSSCSARLVFCTPHVF 281
>sp|Q9X255|YH33_THEMA HYPOTHETICAL PROTEIN TM1733 >gi|7445317|pir||D72217 conserved
hypothetical protein - Thermotoga maritima (strain MSB8)
>gi|4982310|gb|AAD36798.1|AE001812_8 (AE001812)
conserved hypothetical protein [Thermotoga maritima]
Length = 258
Score = 102 bits (252), Expect = 5e-21
Identities = 73/243 (30%), Positives = 122/243 (50%), Gaps = 23/243 (9%)
Query: 32 AIVDSETYEHFPHFKEEDIAKLEEF------------DVDFIIAIGGDGTILRIEHKTKK 79
AI+ E E F +E I+K E D I+ +GGDGT+L+ K
Sbjct: 4 AILYREEREKEGEFLKEKISKEHEVIEFGEANAPGRVTADLIVVVGGDGTVLKAAKKAAD 63
Query: 80 DIPILSINMGTLGFLTEVEPSETFFAINRLLRGEYYIDERIKLRTYINGEARIPD--ALN 137
P++ G LGFLT S T I+R L + R + R +I E+ + + ALN
Sbjct: 64 GTPMVGFKAGRLGFLT----SYTLDEIDRFLEDLRNWNFREETRWFIQIESELGNHLALN 119
Query: 138 EVAILTGIPGKVIHLRYYVDGGLADEVRADGLVVATPTGSTGYAMSAGGPFVDPRLDTII 197
+V + + GK++ + V+ + ADG+V++TPTGST Y++S GGP + P + +
Sbjct: 120 DVTLERDLSGKMVEIEVEVEHHSSMWFFADGVVISTPTGSTAYSLSIGGPIIFPECEVLE 179
Query: 198 IAPLLPLPRTSVPMVVPGYSKIEIEFVTKREVILAVDGQYYEHLSPDIKIRIEKSPRKTK 257
I+P+ P + +V+P K+ +E ++R++ + VDG +I ++KS R +
Sbjct: 180 ISPIAPQFFLTRSVVIPSNFKVVVE--SQRDINMLVDGVL---TGKTKRIEVKKSRRYVR 234
Query: 258 FVR 260
+R
Sbjct: 235 ILR 237
>pir||T38638 hypothetical protein SPAC323.01c - fission yeast
(Schizosaccharomyces pombe) >gi|5777695|emb|CAB53404.1|
(AL109988) hypothetical protein [Schizosaccharomyces
pombe]
Length = 361
Score = 102 bits (251), Expect = 6e-21
Identities = 66/194 (34%), Positives = 105/194 (54%), Gaps = 7/194 (3%)
Query: 49 DIAKLEEFDVDFIIAIGGDGTILRIEHKTKKD--IPILSINMGTLGFLTEVEPSETFFAI 106
+I+ LE+ VD II +GGDGTIL + PILS ++GTLGFL + A
Sbjct: 117 EISDLEQ-KVDAIITVGGDGTILHAASLFARSGMPPILSFSLGTLGFLLPFDFGSFQTAF 175
Query: 107 NRLLRGEYYIDERIKLRTYINGEARIPD--ALNEVAILTGIPGKVIHLRYYVDGGLADEV 164
++ R++LR + + A+NE+ I G+ + L+ +V+ E
Sbjct: 176 ADFYNSRSFVLMRMRLRVAMKTKLYNESIYAMNEMHIHRGLSPHMAVLKVFVNDKFLTEA 235
Query: 165 RADGLVVATPTGSTGYAMSAGGPFVDPRLDTIIIAPLLPLPRTSVPMVVPGYSKIEIEFV 224
ADGL+++TPTGST Y++S+GGP V P ++ +++ P+ P + P++ P KI IE
Sbjct: 236 VADGLIISTPTGSTAYSLSSGGPIVHPSINALLLTPICPNSLSFRPVLFPDTFKISIETS 295
Query: 225 TKREV--ILAVDGQ 236
K V L++DG+
Sbjct: 296 NKSRVRPQLSIDGR 309
>sp|O33196|YG95_MYCTU HYPOTHETICAL 32.9 KDA PROTEIN RV1695 >gi|7445322|pir||F70502
hypothetical protein Rv1695 - Mycobacterium tuberculosis
(strain H37RV) >gi|2326738|emb|CAB10952.1| (Z98268)
hypothetical protein Rv1695 [Mycobacterium tuberculosis]
Length = 307
Score = 100 bits (247), Expect = 2e-20
Identities = 81/296 (27%), Positives = 137/296 (45%), Gaps = 30/296 (10%)
Query: 5 IVARRDREEALKLAYRVYDYLKVRGYDAI----VDSETYEHFP-HFKEEDI----AKLEE 55
+V R+EA + A RV KV G + I + +E + H +D+ ++E
Sbjct: 9 LVVHTGRDEATETARRVE---KVLGDNKIALRVLSAEAVDRGSLHLAPDDMRAMGVEIEV 65
Query: 56 FDVD--------FIIAIGGDGTILRIEHKTKK-DIPILSINMGTLGFLTEVEPSETFFAI 106
D D ++ +GGDGT LR + IP+L +N+G +GFL E E +
Sbjct: 66 VDADQHAADGCELVLVLGGDGTFLRAAELARNASIPVLGVNLGRIGFLAEAEAEAIDAVL 125
Query: 107 NRLLRGEYYIDERIKLRTYINGEARIPD---ALNEVAILTGIPGKVIHLRYYVDGGLADE 163
++ +Y +++R+ L + RI + ALNEV++ G V+ + +DG
Sbjct: 126 EHVVAQDYRVEDRLTLDVVVRQGGRIVNRGWALNEVSLEKGPRLGVLGVVVEIDGRPVSA 185
Query: 164 VRADGLVVATPTGSTGYAMSAGGPFVDPRLDTIIIAPLLPLPRTSVPMVVPGYSKIEIEF 223
DG++V+TPTGST YA SAGGP + P L+ I++ P PMV + I IE
Sbjct: 186 FGCDGVLVSTPTGSTAYAFSAGGPVLWPDLEAILVVPNNAHALFGRPMVTSPEATIAIEI 245
Query: 224 -VTKREVILAVDGQYYEHLSPDIKIRIEKSPRKTKFVR-----FTREIYPKYTMRI 273
+ ++ DG+ + ++ + + K+ R FT + K+ + +
Sbjct: 246 EADGHDALVFCDGRREMLIPAGSRLEVTRCVTSVKWARLDSAPFTDRLVRKFRLPV 301
>sp|Q49897|YG95_MYCLE HYPOTHETICAL 33.2 KDA PROTEIN MLC1351.13C >gi|2145866|pir||S72967
hypothetical protein - Mycobacterium leprae
>gi|467159|gb|AAA50923.1| (U00021) No definition line
found [Mycobacterium leprae] >gi|2065224|emb|CAB08286.1|
(Z95117) hypothetical protein MLC1351.13c [Mycobacterium
leprae]
Length = 311
Score = 96.3 bits (236), Expect = 4e-19
Identities = 67/250 (26%), Positives = 114/250 (44%), Gaps = 19/250 (7%)
Query: 34 VDSETYEHFPHFKEEDIAKLEEFDVDFIIAIGGDGTILRIEHKTKKD-IPILSINMGTLG 92
VD E + PH + + ++ +GGDGT LR + IP+L +N+G +G
Sbjct: 65 VDIEVVDADPHVAQ---------GCELVLVLGGDGTFLRAAELARTARIPVLGVNLGRIG 115
Query: 93 FLTEVEPSETFFAINRLLRGEYYIDERIKLRTYINGEARIPD---ALNEVAILTGIPGKV 149
FL E E + ++ Y ++ER+ L + I D ALNE ++ G V
Sbjct: 116 FLAEAEAEAIDVVLEHVIARSYRVEERLTLDIVVRQGGNIIDQGWALNEASLEKGPRLGV 175
Query: 150 IHLRYYVDGGLADEVRADGLVVATPTGSTGYAMSAGGPFVDPRLDTIIIAPLLPLPRTSV 209
+ + ++G DG++V+TPTGST YA SAGGP + P L+ I++ P
Sbjct: 176 LGVVVEIEGRPVSTFGCDGVLVSTPTGSTAYAFSAGGPVLWPDLEAILVVPNNAHALFGR 235
Query: 210 PMVVPGYSKIEIEF-VTKREVILAVDGQYYEHLSPDIKIRIEKSPRKTKFVR-----FTR 263
PMV + + IE + ++ DG+ + ++ + + K+ R FT
Sbjct: 236 PMVTSPDATVAIELEANGNDALVFCDGRREMIIPAGGRLEVTRCATPVKWARLDSAPFTD 295
Query: 264 EIYPKYTMRI 273
+ K+ + +
Sbjct: 296 RLVSKFRLPV 305
>pir||H81412 hypothetical protein Cj0641 [imported] - Campylobacter jejuni
(strain NCTC 11168) >gi|6968108|emb|CAB75277.1|
(AL139075) hypothetical protein Cj0641 [Campylobacter
jejuni]
Length = 286
Score = 96.0 bits (235), Expect = 5e-19
Identities = 77/269 (28%), Positives = 131/269 (48%), Gaps = 24/269 (8%)
Query: 2 RFGIVARRD---REEALKLAYRVYDYLKVRGYDAIVDSETYE--HFPHFKEEDIAKLEEF 56
+ G+V R + +E LKL L + + ++ E+ E P + +D+ K+
Sbjct: 12 KIGLVTRPNVSLDKEILKLQ----SILSIYKVELVLLKESSEILDLPKYGLDDLFKIS-- 65
Query: 57 DVDFIIAIGGDGTILRIEHKT-KKDIPILSINMGTLGFLTE--VEPSETFFAINRLLRGE 113
DF+I++GGDGT++ + K + D +L I+ G LGFLT+ V+ +E FF +GE
Sbjct: 66 --DFVISLGGDGTLISLCRKACEYDKAVLGIHAGHLGFLTDFKVDEAENFF--QAFFQGE 121
Query: 114 YYIDERIKLRTYIN---GEARIPDALNEVAILTGIPGKVIHLRYYVDGGLADEVRADGLV 170
+ I++ L ++ G+ A N+V I + H+ + +E DGL+
Sbjct: 122 FRIEKPYLLSIFLEDRQGKILEKLAFNDVVISKNNQASMAHIEVFRKEKKFNEYFGDGLI 181
Query: 171 VATPTGSTGYAMSAGGPFVDPRLDTIIIAPLLPLPRTSVPMVVPGYSKIEIEFVTKREVI 230
VATP GST Y +SA GP V I+ P+ T P+V+P +IEI ++ +
Sbjct: 182 VATPAGSTAYNLSANGPIVYTLAQAFILTPVCSHSLTQRPIVLPKGFEIEI---MAKDCM 238
Query: 231 LAVDGQYYEHLSPDIKIRIEKSPRKTKFV 259
L +DGQ ++ I++ S + +
Sbjct: 239 LCIDGQENYKMNDFKSIKVGLSDKNVALI 267
>gi|6320794 Yel041wp [Saccharomyces cerevisiae] >gi|418405|sp|P32622|YEF1_YEAST
HYPOTHETICAL 55.9 KDA PROTEIN IN GDA1-UTR2 INTERGENIC
REGION >gi|320711|pir||S30838 hypothetical protein
YEL041w - yeast (Saccharomyces cerevisiae)
>gi|603638|gb|AAB65001.1| (U18779) Yel041wp
[Saccharomyces cerevisiae]
Length = 495
Score = 95.2 bits (233), Expect = 8e-19
Identities = 70/250 (28%), Positives = 113/250 (45%), Gaps = 45/250 (18%)
Query: 31 DAIVDSETYEHFPHFKEEDIAKLEEFDVDFIIAIGGDGTILRIEHKTKKDIP-ILSINMG 89
D DS ++ + ++ K + D +I +GGDGT+L KD+P I+ +G
Sbjct: 156 DLCKDSNCSKNRVKYWSKEFVKKHDSFFDLMITLGGDGTVLFASSIFTKDVPPIVPFALG 215
Query: 90 TLGFLTEVEPSETFFAINRLLRGEYYIDERIKL--RTYINGEARIPDA------------ 135
+LGFLT E + +L E I+ R++L + Y + I A
Sbjct: 216 SLGFLTNFEFQNFKETLKHILTDEVRINLRMRLQCKLYRRNKPEIDAATGRKICYIDFIS 275
Query: 136 ----LNEVAILTGIPGKVIHLRYYVDGGLADEVRADGLVVATPTGSTGYAMSAGGPFVDP 191
LNEV I G + L Y + L +V+ DGL+VATPTGST Y++SAGG + P
Sbjct: 276 EHHVLNEVTIDRGPAPCLSLLELYGNDSLMTKVQGDGLIVATPTGSTAYSLSAGGSLISP 335
Query: 192 RLDTIIIAPLLPLPRTSVPMVVPGYSKIEIEFVTKREVILAVDGQYYEHLSPDIKIRIEK 251
++ I + P+ P + P+++P S ++K+R++
Sbjct: 336 SVNAIAVTPICPHTLSFRPIILPD--------------------------SMELKVRVDM 369
Query: 252 SPRKTKFVRF 261
+ R T +V F
Sbjct: 370 NSRGTSWVNF 379
>gb|AAF58355.1| (AE003818) CG6152 gene product [alt 2] [Drosophila melanogaster]
Length = 454
Score = 92.4 bits (226), Expect = 5e-18
Identities = 65/220 (29%), Positives = 109/220 (49%), Gaps = 26/220 (11%)
Query: 58 VDFIIAIGGDGTILRIEHKTKKDIP-ILSINMGTLGFLTEVEPSETFFAINRLLRGEYYI 116
+DFI+ +GGDGT+L ++ +P +++ ++G+LGFLT + +L G +
Sbjct: 175 IDFIVCLGGDGTLLYASLLFQQSVPPVMAFHLGSLGFLTPFRFDNFEEQLTSVLEGHAAL 234
Query: 117 DERIKLRTY-----------------INGEARIPDA-----LNEVAILTGIPGKVIHLRY 154
R +LR ++GEAR P A LNEV I G + ++
Sbjct: 235 TLRSRLRCVMHRRSDRKHEAKTLEADLDGEAR-PAANSILVLNEVVIDRGPSPYLSNIDL 293
Query: 155 YVDGGLADEVRADGLVVATPTGSTGYAMSAGGPFVDPRLDTIIIAPLLPLPRTSVPMVVP 214
++DG V+ DGL+V+TPTGST YA +AG + P + I++ P+ P + P+VVP
Sbjct: 294 FLDGKYITSVQGDGLIVSTPTGSTAYAAAAGASMIHPSVPAIMVTPICPHSLSFRPIVVP 353
Query: 215 G--YSKIEIEFVTKREVILAVDGQYYEHLSPDIKIRIEKS 252
KI + ++ ++ DG+ + L +R+ S
Sbjct: 354 AGVELKISVSPESRNTSWVSFDGRNRQELFHGDSLRVTTS 393
>gb|AAF58356.1| (AE003818) CG6152 gene product [alt 1] [Drosophila melanogaster]
Length = 453
Score = 92.4 bits (226), Expect = 5e-18
Identities = 65/220 (29%), Positives = 109/220 (49%), Gaps = 26/220 (11%)
Query: 58 VDFIIAIGGDGTILRIEHKTKKDIP-ILSINMGTLGFLTEVEPSETFFAINRLLRGEYYI 116
+DFI+ +GGDGT+L ++ +P +++ ++G+LGFLT + +L G +
Sbjct: 174 IDFIVCLGGDGTLLYASLLFQQSVPPVMAFHLGSLGFLTPFRFDNFEEQLTSVLEGHAAL 233
Query: 117 DERIKLRTY-----------------INGEARIPDA-----LNEVAILTGIPGKVIHLRY 154
R +LR ++GEAR P A LNEV I G + ++
Sbjct: 234 TLRSRLRCVMHRRSDRKHEAKTLEADLDGEAR-PAANSILVLNEVVIDRGPSPYLSNIDL 292
Query: 155 YVDGGLADEVRADGLVVATPTGSTGYAMSAGGPFVDPRLDTIIIAPLLPLPRTSVPMVVP 214
++DG V+ DGL+V+TPTGST YA +AG + P + I++ P+ P + P+VVP
Sbjct: 293 FLDGKYITSVQGDGLIVSTPTGSTAYAAAAGASMIHPSVPAIMVTPICPHSLSFRPIVVP 352
Query: 215 G--YSKIEIEFVTKREVILAVDGQYYEHLSPDIKIRIEKS 252
KI + ++ ++ DG+ + L +R+ S
Sbjct: 353 AGVELKISVSPESRNTSWVSFDGRNRQELFHGDSLRVTTS 392
>gb|AAF58357.1| (AE003818) CG6152 gene product [alt 3] [Drosophila melanogaster]
Length = 375
Score = 92.4 bits (226), Expect = 5e-18
Identities = 65/220 (29%), Positives = 109/220 (49%), Gaps = 26/220 (11%)
Query: 58 VDFIIAIGGDGTILRIEHKTKKDIP-ILSINMGTLGFLTEVEPSETFFAINRLLRGEYYI 116
+DFI+ +GGDGT+L ++ +P +++ ++G+LGFLT + +L G +
Sbjct: 96 IDFIVCLGGDGTLLYASLLFQQSVPPVMAFHLGSLGFLTPFRFDNFEEQLTSVLEGHAAL 155
Query: 117 DERIKLRTY-----------------INGEARIPDA-----LNEVAILTGIPGKVIHLRY 154
R +LR ++GEAR P A LNEV I G + ++
Sbjct: 156 TLRSRLRCVMHRRSDRKHEAKTLEADLDGEAR-PAANSILVLNEVVIDRGPSPYLSNIDL 214
Query: 155 YVDGGLADEVRADGLVVATPTGSTGYAMSAGGPFVDPRLDTIIIAPLLPLPRTSVPMVVP 214
++DG V+ DGL+V+TPTGST YA +AG + P + I++ P+ P + P+VVP
Sbjct: 215 FLDGKYITSVQGDGLIVSTPTGSTAYAAAAGASMIHPSVPAIMVTPICPHSLSFRPIVVP 274
Query: 215 G--YSKIEIEFVTKREVILAVDGQYYEHLSPDIKIRIEKS 252
KI + ++ ++ DG+ + L +R+ S
Sbjct: 275 AGVELKISVSPESRNTSWVSFDGRNRQELFHGDSLRVTTS 314
>gi|6322509 involved in ferric reductase activity; Utr1p [Saccharomyces
cerevisiae] >gi|729534|sp|P21373|UTR1_YEAST UTR1 PROTEIN
(UNKNOWN TRANSCRIPT 1 PROTEIN) >gi|630365|pir||S46589
UTR1 protein - yeast (Saccharomyces cerevisiae)
>gi|695796|gb|AAA62857.1| (L26347) orf gtE530
[Saccharomyces cerevisiae] >gi|1015709|emb|CAA89577.1|
(Z49549) ORF YJR049c [Saccharomyces cerevisiae]
>gi|1197078|gb|AAA88752.1| (L36344) ORF; putative
[Saccharomyces cerevisiae]
Length = 530
Score = 92.1 bits (225), Expect = 7e-18
Identities = 68/241 (28%), Positives = 114/241 (47%), Gaps = 23/241 (9%)
Query: 35 DSETYEHFPHFKEEDIAKLEEFDVDFIIAIGGDGTILRIEHKTKKDIP-ILSINMGTLGF 93
DS+ E + +D + + D ++ +GGDGT+L + ++ +P ++S ++G+LGF
Sbjct: 181 DSKCRESRIKYWTKDFIREHDVFFDLVVTLGGDGTVLFVSSIFQRHVPPVMSFSLGSLGF 240
Query: 94 LTEVEPSETFFAINRLLRGEYYIDERIKLRTYINGEARIPDA------------------ 135
LT + + R++ + + R++L I R P+
Sbjct: 241 LTNFKFEHFREDLPRIMNHKIKTNLRLRLECTIYRRHR-PEVDPNTGKKICVVEKLSTHH 299
Query: 136 -LNEVAILTGIPGKVIHLRYYVDGGLADEVRADGLVVATPTGSTGYAMSAGGPFVDPRLD 194
LNEV I G + L Y DG L +ADGL+ ATPTGST Y++SAGG V P ++
Sbjct: 300 ILNEVTIDRGPSPFLSMLELYGDGSLMTVAQADGLIAATPTGSTAYSLSAGGSLVCPTVN 359
Query: 195 TIIIAPLLPLPRTSVPMVVPG--YSKIEIEFVTKREVILAVDGQYYEHLSPDIKIRIEKS 252
I + P+ P + P+++P K+++ ++ A DG+ L I I S
Sbjct: 360 AIALTPICPHALSFRPIILPESINLKVKVSMKSRAPAWAAFDGKDRIELQKGDFITICAS 419
Query: 253 P 253
P
Sbjct: 420 P 420
>sp|O25944|YD94_HELPY HYPOTHETICAL PROTEIN HP1394 >gi|7445318|pir||B64694 conserved
hypothetical protein HP1394 - Helicobacter pylori
(strain 26695) >gi|2314563|gb|AAD08434.1| (AE000639)
conserved hypothetical protein [Helicobacter pylori
26695]
Length = 284
Score = 92.1 bits (225), Expect = 7e-18
Identities = 67/217 (30%), Positives = 106/217 (47%), Gaps = 17/217 (7%)
Query: 59 DFIIAIGGDGTIL---RIEHKTKKDIPILSINMGTLGFLTEVEPSETFFAINRLLRGEYY 115
D + +GGDGTIL R+ H K P + +G LGFL+ VE + + L+ +
Sbjct: 62 DAFLCLGGDGTILGALRMTHSYNK--PCFGVRIGNLGFLSAVELN----GLKDFLQD--F 113
Query: 116 IDERIKLRTYINGEARIPD----ALNEVAILTGIPGKVIHLRYYVDGGLADEVRADGLVV 171
+RIKL ++ E RI A+NE+ I V+ ++ Y + + DGL++
Sbjct: 114 KQDRIKLEEHLALEGRIGKTSFYAINEIVIAKKKALGVLDIKAYAGHTPFNTYKGDGLII 173
Query: 172 ATPTGSTGYAMSAGGPFVDPRLDTIIIAPLLPLPRTSVPMVVPGYSKIEIEFVTKREVIL 231
ATP GST Y +SA GP V + I+ PL T P+V+ ++ + F + ++
Sbjct: 174 ATPLGSTAYNLSAHGPIVHALSQSYILTPLCDFSLTQRPLVLG--AEFCLNFCAHEDALV 231
Query: 232 AVDGQYYEHLSPDIKIRIEKSPRKTKFVRFTREIYPK 268
+DGQ L + + I+KSP TK ++ Y K
Sbjct: 232 VIDGQATYDLKANQPLYIQKSPTTTKLLQKNSRDYFK 268
>gi|6325068 Pos5p [Saccharomyces cerevisiae] >gi|8928263|sp|Q06892|POS5_YEAST
POS5 PROTEIN >gi|2132397|pir||S65200 POS5 protein -
yeast (Saccharomyces cerevisiae)
>gi|1370393|emb|CAA97900.1| (Z73544) ORF YPL188w
[Saccharomyces cerevisiae]
Length = 414
Score = 90.1 bits (220), Expect = 3e-17
Identities = 56/190 (29%), Positives = 96/190 (50%), Gaps = 13/190 (6%)
Query: 59 DFIIAIGGDGTILR--IEHKTKKDIPILSINMGTLGFLTEVEPSETFFAINRLLRGEYYI 116
D ++ +GGDGTIL + P+L+ +GTLGFL+ + E ++
Sbjct: 142 DLLVTLGGDGTILHGVSMFGNTQVPPVLAFALGTLGFLSPFDFKEHKKVFQEVISSRAKC 201
Query: 117 DERIKLRTYI----NGEARIPDALNEVAILTGIPGKVIHLRYYVDGGLADEVRADGLVVA 172
R +L ++ + + + A+N++ + G + +L ++DG ADG+ +A
Sbjct: 202 LHRTRLECHLKKKDSNSSIVTHAMNDIFLHRGNSPHLTNLDIFIDGEFLTRTTADGVALA 261
Query: 173 TPTGSTGYAMSAGGPFVDPRLDTIIIAPLLPLPRTSVPMVVPGYSKIEIEFVTKRE---- 228
TPTGST Y++SAGG V P + I++ P+ P + P+++P S I I+ +K
Sbjct: 262 TPTGSTAYSLSAGGSIVSPLVPAILMTPICPRSLSFRPLILPHSSHIRIKIGSKLNQKPV 321
Query: 229 ---VILAVDG 235
V L+VDG
Sbjct: 322 NSVVKLSVDG 331
>emb|CAA59017.1| (X84260) POS5 [Saccharomyces cerevisiae]
Length = 414
Score = 88.5 bits (216), Expect = 8e-17
Identities = 51/174 (29%), Positives = 89/174 (50%), Gaps = 6/174 (3%)
Query: 59 DFIIAIGGDGTILR--IEHKTKKDIPILSINMGTLGFLTEVEPSETFFAINRLLRGEYYI 116
D ++ +GGDGTIL + P+L+ +GTLGFL + E ++
Sbjct: 142 DLLVTLGGDGTILHGVSMFGNTQVPPVLAFALGTLGFLLPFDFKEHKKVFQEVISSRAKC 201
Query: 117 DERIKLRTYI----NGEARIPDALNEVAILTGIPGKVIHLRYYVDGGLADEVRADGLVVA 172
R +L ++ + + + A+N++ + G + +L ++DG ADG+ +A
Sbjct: 202 LHRTRLECHLKKKDSNSSIVTHAMNDIFLHRGNSPHLTNLDIFIDGEFLTRTTADGVALA 261
Query: 173 TPTGSTGYAMSAGGPFVDPRLDTIIIAPLLPLPRTSVPMVVPGYSKIEIEFVTK 226
TPTGST Y++SAGG V P + I++ P+ P + P+++P S I I+ +K
Sbjct: 262 TPTGSTAYSLSAGGSIVSPLVPAILMTPICPRSLSFRPLILPHSSHIRIKIGSK 315
>sp|Q9ZJ81|YD94_HELPJ HYPOTHETICAL PROTEIN HP1394/JHP1433 >gi|7445319|pir||A71807
hypothetical protein jhp1433 - Helicobacter pylori
(strain J99) >gi|4156053|gb|AAD07009.1| (AE001566)
putative [Helicobacter pylori J99]
Length = 307
Score = 86.2 bits (210), Expect = 4e-16
Identities = 65/214 (30%), Positives = 103/214 (47%), Gaps = 17/214 (7%)
Query: 62 IAIGGDGTIL---RIEHKTKKDIPILSINMGTLGFLTEVEPSETFFAINRLLRGEYYIDE 118
+ +GGDGTIL R+ H K P + +G LGFL+ VE + + L +
Sbjct: 88 LCLGGDGTILGALRMTHAHNK--PCFGVRIGNLGFLSAVELNGLKDFLQDLKQN------ 139
Query: 119 RIKLRTYINGEARIPD----ALNEVAILTGIPGKVIHLRYYVDGGLADEVRADGLVVATP 174
RIKL ++ E RI + A+NE+ I V+ ++ + + DGL++ATP
Sbjct: 140 RIKLEEHLALEGRIGNTSFYAINEIVIAKKKALGVLDIKACAGHTPFNTYKGDGLIIATP 199
Query: 175 TGSTGYAMSAGGPFVDPRLDTIIIAPLLPLPRTSVPMVVPGYSKIEIEFVTKREVILAVD 234
GST Y +SA GP V + I+ PL T P+V+ ++ + F + ++ +D
Sbjct: 200 LGSTAYNLSAHGPIVHALSQSYILTPLCDFSLTQRPLVLG--AEFCLSFCAHEDALVVID 257
Query: 235 GQYYEHLSPDIKIRIEKSPRKTKFVRFTREIYPK 268
GQ L + + I+KSP TK ++ Y K
Sbjct: 258 GQATYDLKANQPLYIQKSPTTTKLLQKNSRDYFK 291
>pir||T38757 hypothetical protein SPAC3H5.11 - fission yeast
(Schizosaccharomyces pombe) >gi|2414651|emb|CAB16595.1|
(Z99296) hypothetical protein [Schizosaccharomyces
pombe]
Length = 393
Score = 83.5 bits (203), Expect = 3e-15
Identities = 65/236 (27%), Positives = 106/236 (44%), Gaps = 35/236 (14%)
Query: 59 DFIIAIGGDGTILRIEHKTKKDI-PILSINMGTLGFLTEVEPSETFFAINRLLRGEY-YI 116
D ++ +GGDGT+L ++ + PI+ MGTLGFLT + + +I + Y ++
Sbjct: 142 DLVLTLGGDGTVLYTSRLFQRTVPPIMPFAMGTLGFLTHFDVKKYKTSILEICNEMYVHL 201
Query: 117 DERIKLRT--------YINGEARIPDA-----------------LNEVAILTGIPGKVIH 151
R + R +IN + + + LNEV I G +
Sbjct: 202 RTRFECRVMKKKNRTQWINIDEHLSQSLHATDTETHTFTDSLVVLNEVVIDRGPNTAMSD 261
Query: 152 LRYYVDGGLADEVRADGLVVATPTGSTGYAMSAGGPFVDPRLDTIIIAPLLPLPRTSVPM 211
+ YVD V+ADGL ++TPTGST Y+++AGG P + +I++P+ + P+
Sbjct: 262 IMLYVDSKYLTTVKADGLCISTPTGSTAYSLAAGGSLCHPDISVMIVSPICAHSLSLRPI 321
Query: 212 VVPGYSKIEIEFVTKREVILAVDGQYYEHLSPDIKIRIEKSPRKTKFVRFTREIYP 267
VP + V++ D Q +S D + R E P VR +R +P
Sbjct: 322 HVPDSMAL--------HVVIPQDAQQSSWISFDGRNRTELLPGDYLTVRISRYPFP 369
>gb|AAK42388.1| Conserved hypothetical protein [Sulfolobus solfataricus]
Length = 249
Score = 77.3 bits (187), Expect = 2e-13
Identities = 63/210 (30%), Positives = 103/210 (49%), Gaps = 11/210 (5%)
Query: 55 EFDVDFIIAIGGDGTILRIEHKTKKDIPILSINMGTLGFLTEVEPSETFFAINRLLRGEY 114
+ D D++IA+GGDGT+LR K P+++I G G L +V + A+ RL +G+Y
Sbjct: 33 DIDFDYVIAVGGDGTLLR---AVKLGKPVIAIKAGRRGLLMDVPVDKIEDALLRLKKGDY 89
Query: 115 YIDERIKLRTYINGEARIPDALNEVAILTGIPGKVIHLRYYVDGGLADEVRADGLVVATP 174
+E + L N + + NE+ IL P + I + D V DG++V+TP
Sbjct: 90 NEEEYMLLEMVHNDKVEL--GFNEIGILYDRP-EAIKVGISFDTERV-SVEGDGVLVSTP 145
Query: 175 TGSTGYAMSAGGPFVDPRLDTIIIAPLLPLPRTSVPMVVPGYSKIEIEFVTK---REVIL 231
GS+G+ MSA + L+ I I + P+ +V+P S I + K + +
Sbjct: 146 QGSSGWGMSATNSLLYKDLNAIEIIFVNPIFYYLRSVVIPPKSLI-LRLEDKGYPQTARV 204
Query: 232 AVDGQYYEHLSPDIKIRIEKSPRKTKFVRF 261
VDG+ + + +I + S K K +RF
Sbjct: 205 VVDGEVVTLIKTNQEITVRVSQHKAKILRF 234
>sp|Q9ZDA2|Y440_RICPR HYPOTHETICAL PROTEIN RP440 >gi|7467758|pir||G71702 hypothetical
protein RP440 - Rickettsia prowazekii
>gi|3860997|emb|CAA14897.1| (AJ235271) unknown
[Rickettsia prowazekii]
Length = 255
Score = 73.0 bits (176), Expect = 4e-12
Identities = 65/215 (30%), Positives = 106/215 (49%), Gaps = 16/215 (7%)
Query: 52 KLEEFDVDFIIAIGGDGTILRIEHKTKK-DIPILSINMGTLGFLTEVEPSETFFAINRLL 110
K+EE +V II IGGDG +L H+ +IP +N+G+LGFL + P +T + +
Sbjct: 31 KIEEAEV--IIIIGGDGELLHNIHRYMHLNIPFYGLNLGSLGFL--MNPLDTKKLLQNIY 86
Query: 111 RGEYYIDERIKLRTY-INGEARIPDALNEVAILTGIPGKVIHLRYYVDG-GLADEVRADG 168
I + ++ +G+ A+NEV+I +V R V+G E+ ADG
Sbjct: 87 ESTVSILHPLLMQVEDTSGQIYKALAINEVSIFRKT-NQVAKFRIDVNGVERMSELVADG 145
Query: 169 LVVATPTGSTGYAMSAGGPFVDPRLDTIIIAPLLPL-PRT--SVPMVVPGYSKIEIEFVT 225
+VATP GS+ Y +SAGGP + + + + P+ PR ++ K EI +T
Sbjct: 146 ALVATPAGSSAYNLSAGGPILPLASNMLCLTPICSFRPRRWHGALLLSTDTIKFEILNIT 205
Query: 226 KREVILAVDGQYYEHLSPDIKIRIEKSPRKTKFVR 260
KR V D Q + +++ R+ K K+++
Sbjct: 206 KRPVNATADFQEFNNIT-----RVTVKSTKDKYIK 235
>dbj|BAB06567.1| (AP001516) unknown conserved protein [Bacillus halodurans]
Length = 265
Score = 72.2 bits (174), Expect = 7e-12
Identities = 58/222 (26%), Positives = 106/222 (47%), Gaps = 17/222 (7%)
Query: 53 LEEFDVDFIIAIGGDGTILRIEHKTK---KDIPILSINMGTLGFLTEVEPSETFFAINRL 109
L+E + D +I +GGDGT+L H+ +D + I+ G LGF + P E + +
Sbjct: 31 LDEQEPDIVITVGGDGTLLHAFHRYTSRLEDTAFVGIHTGHLGFYADWVPDEVEKLVIHI 90
Query: 110 LRGEYYIDE----RIKLRTYINGEARIPDALNEVAILTGIPGKVIHLRYYVDGGLADEVR 165
+ Y I E + +R E++ ALNE + + V ++ + G + + R
Sbjct: 91 AKTPYQIVEYPLLEVVVRHTDESESKRLLALNECTVKSQEGSLVSNVE--IKGDVFEVFR 148
Query: 166 ADGLVVATPTGSTGYAMSAGGPFVDPRLDTIIIAPLLPLPR-----TSVPMVVPGYSKIE 220
DGL ++TP+GST Y + GG + P L +I I+ + + P+V+P +
Sbjct: 149 GDGLCISTPSGSTAYNKALGGAILHPSLASIQISEMASINNRVYRTIGSPLVLPQHHTCL 208
Query: 221 IEFVTKREVILAVDGQYYEHLSPDIK-IRIEKSPRKTKFVRF 261
I+ + + E+ + +D ++ +K I+ + K +F RF
Sbjct: 209 IKPLNQVELQVTID--HFTLAYKRVKSIQCRVAEEKIRFARF 248
>sp|O31612|YJBN_BACSU HYPOTHETICAL 30.0 KDA PROTEIN IN MECA-TENA INTERGENIC REGION
>gi|7429821|pir||F69844 conserved hypothetical protein
yjbN - Bacillus subtilis >gi|2633515|emb|CAB13018.1|
(Z99110) similar to hypothetical proteins [Bacillus
subtilis]
Length = 266
Score = 70.6 bits (170), Expect = 2e-11
Identities = 58/223 (26%), Positives = 103/223 (46%), Gaps = 17/223 (7%)
Query: 52 KLEEFDVDFIIAIGGDGTILRIEHKTKKDIP---ILSINMGTLGFLTEVEPSETFFAINR 108
+L+E + + +I++GGDGT+L H+ + + ++ G LGF + P E +
Sbjct: 30 ELDENEPEIVISVGGDGTLLYAFHRYSDRLDKTAFVGVHTGHLGFYADWVPHEIEKLVLA 89
Query: 109 LLRGEYYIDERIKLRTYINGEARIPD----ALNEVAILTGIPGKVIHLRYYVDGGLADEV 164
+ + Y+ E L + + ALNE I + I G ++ + G L +
Sbjct: 90 IAKTPYHTVEYPLLEVIVTYHENEREERYLALNECTIKS-IEGSLV-ADVEIKGQLFETF 147
Query: 165 RADGLVVATPTGSTGYAMSAGGPFVDPRLDTIIIAPLLPLPR-----TSVPMVVPGYSKI 219
R DGL ++TP+GST Y + GG + P + I +A + + P+++P +
Sbjct: 148 RGDGLCLSTPSGSTAYNKALGGAIIHPSIRAIQLAEMASINNRVFRTVGSPLLLPSHHDC 207
Query: 220 EIEFVTKREVILAVDGQYYEHLSPDIK-IRIEKSPRKTKFVRF 261
I+ + EV V + L D+K IR + + K +F RF
Sbjct: 208 MIK--PRNEVDFQVTIDHLTLLHKDVKSIRCQVASEKVRFARF 248
>pir||T50409 utr1 protein homolog [imported] - fission yeast
(Schizosaccharomyces pombe) >gi|7160247|emb|CAB76211.1|
(AL157991) yeast utr1 protein homolog; possibly
associated with ferric reductase activity
[Schizosaccharomyces pombe]
Length = 449
Score = 69.5 bits (167), Expect = 4e-11
Identities = 64/244 (26%), Positives = 108/244 (44%), Gaps = 34/244 (13%)
Query: 59 DFIIAIGGDGTILRIEHKTKK-DIPILSINMGTL-GFLTEVEPSE-------------TF 103
D I IG + T+L +K P+LS + + GFLT S +
Sbjct: 176 DLAITIGDNSTLLYTSWLFQKIGPPVLSFSDDDVPGFLTHFSLSNYQQHLYQVLTQNVSL 235
Query: 104 FAINRLLRGEYYIDERIKLRTYINGEARIPDALNEVAILTGIPGKVIHLRYYVDGGLADE 163
+RL + DE+ K + A +L+E+ I G + +L Y + L
Sbjct: 236 RFCSRLQCSFHKYDEKTKQYSL----ASTTYSLDEILISRGEHPFISNLNVYNNSELMTV 291
Query: 164 VRADGLVVATPTGSTGYAMSAGGPFVDPRLDTIIIAPLLPLPRTSVPMVVPGYSKIEIEF 223
V+ADGLVVATPTGST + +AGG V P L+ I++ P+ P + P+++P Y+ + +E
Sbjct: 292 VQADGLVVATPTGSTNISANAGGSLVHPALNAILVTPVCPHTLSFRPIILPDYNVLNVEI 351
Query: 224 -----------VTKREVILAVDGQYYEHLSPDIKIRIEKSPRKTKFVRFTREIYPKYTMR 272
V + E + G Y ++ ++P ++T+ + K+
Sbjct: 352 PLDSRSSAFFSVDRHESVEMHRGDYLSIVTSHYPFTTIQNPG----YQWTKVLEDKFNWN 407
Query: 273 IKER 276
++ER
Sbjct: 408 VRER 411
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.322 0.144 0.414
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 105302909
Number of Sequences: 2977
Number of extensions: 4643910
Number of successful extensions: 10360
Number of sequences better than 1.0e-10: 45
Number of HSP's better than 0.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 10245
Number of HSP's gapped (non-prelim): 49
length of query: 277
length of database: 189,106,746
effective HSP length: 53
effective length of query: 224
effective length of database: 157,386,935
effective search space: 35254673440
effective search space used: 35254673440
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.9 bits)
S2: 164 (68.3 bits)