BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB1845 (PAB1845) DE:Hypothetical protein
(305 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||E75122 hypothetical protein PAB1845 - Pyrococcus abyssi (st... 596 e-169
pir||H71008 probable ATP-binding transport protein - Pyrococcus ... 542 e-153
pir||G71131 probable ATP-binding protein - Pyrococcus horikoshii... 262 4e-69
gi|11498736 ABC transporter, ATP-binding protein [Archaeoglobus ... 261 6e-69
pir||C71197 probable ATP-binding transport protein - Pyrococcus ... 235 5e-61
pir||H75157 daunorubicin resistance ATP-binding protein (drra-2)... 225 4e-58
emb|CAB37661.1| (AJ224479) cdd4-like protein [Bacillus sphaericus] 213 1e-54
pir||E75108 daunorubicin resistance ATP-binding protein (drra-1)... 212 3e-54
pir||C71081 probable resistance ATP-binding protein - Pyrococcus... 211 1e-53
pir||D72484 probable ATP-binding protein APE2516 - Aeropyrum per... 210 2e-53
pir||C69049 ABC transporter (ATP-binding protein) - Methanobacte... 208 5e-53
pir||B69065 ABC transporter (ATP-binding, daunorubicin resistanc... 206 2e-52
gb|AAK42315.1| ABC transporter, ATP binding protein. [Sulfolobus... 205 4e-52
pir||S74048 probable daunorubicin resistance protein - Sulfolobu... 205 4e-52
dbj|BAB06933.1| (AP001518) ABC transporter (ATP-binding protein)... 203 2e-51
sp|P22040|Y415_SYNY3 HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 203 2e-51
sp|P42332|BCRA_BACLI BACITRACIN TRANSPORT ATP-BINDING PROTEIN BC... 199 3e-50
pir||T31682 bcrA protein - Bacillus licheniformis >gi|4464278|gb... 198 7e-50
pir||G69803 ABC transporter (ATP-binding protein) homolog yfiL -... 197 1e-49
emb|CAC11998.1| (AL445065) ABC transporter related protein [Ther... 197 1e-49
emb|CAB60255.1| (AJ250862) MrsF protein [Bacillus sp. HIL-Y85/54... 197 2e-49
pir||C72303 ABC transporter, ATP-binding protein - Thermotoga ma... 197 2e-49
pir||A75083 ATP-binding transport protein PAB1668 - Pyrococcus a... 195 5e-49
pir||D72257 hypothetical protein TM1403 - Thermotoga maritima (s... 194 1e-48
gi|11499468 daunorubicin resistance ATP-binding protein (drrA) [... 194 1e-48
dbj|BAB04164.1| (AP001508) ABC transporter (ATP-binding protein)... 193 2e-48
gb|AAF99566.1| (AF167161) unknown [Staphylococcus aureus] 191 7e-48
gb|AAG20473.1| (AE005119) copper transport ATP-binding protein; ... 189 3e-47
dbj|BAA75396.1| (AB013378) YhaQ [Bacillus halodurans] 189 4e-47
dbj|BAB04722.1| (AP001510) ABC transporter (ATP-binding protein)... 189 4e-47
sp|P54592|YHCH_BACSU HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 188 8e-47
pir||D72492 probable ABC transporter ATP-binding protein APE2579... 187 1e-46
dbj|BAB04773.1| (AP001510) transposase (08)/ABC transporter (ATP... 187 1e-46
dbj|BAA83955.1| (AB024563) YFIL [Bacillus halodurans] 186 2e-46
pir||T44443 gliding motility protein [imported] - Flavobacterium... 183 2e-45
dbj|BAB04167.1| (AP001508) ABC transporter (ATP-binding protein)... 182 4e-45
emb|CAC11370.1| (AL445063) gliding motility protein related [The... 182 4e-45
pir||A75184 ATP-binding transport protein PAB0434 - Pyrococcus a... 182 5e-45
gb|AAG19180.1| (AE005015) ABC transporter, ATP-binding protein; ... 182 5e-45
pir||B72334 ABC transporter, ATP-binding protein - Thermotoga ma... 181 1e-44
gb|AAG20087.1| (AE005088) ABC transport protein; Trp2 [Halobacte... 181 1e-44
pir||C72568 probable ATP-binding transport protein APE1829 - Aer... 180 2e-44
pir||A70082 ABC transporter (ATP-binding protein) homolog yxlF -... 179 4e-44
gb|AAG20956.1| (AE005162) daunorubicin resistance ABC transporte... 178 5e-44
dbj|BAB05817.1| (AP001514) ABC transporter (ATP-binding protein)... 178 5e-44
pir||S76626 ABC-type transport protein sll0489 - Synechocystis s... 178 7e-44
pir||E69771 ABC transporter (ATP-binding protein) homolog ydbJ -... 178 9e-44
dbj|BAB07612.1| (AP001520) ABC transporter (ATP-binding protein)... 177 1e-43
pir||H71066 probable ATP-binding transport protein - Pyrococcus ... 177 1e-43
pir||C69012 ABC transporter (ATP-binding, daunorubicin resistanc... 177 1e-43
dbj|BAB04537.1| (AP001509) bacitracin ABC transporter (ATP-bindi... 177 2e-43
pir||T50566 probable ABC-type transport protein, ATP-binding com... 176 3e-43
emb|CAB95908.1| (AL359988) putative ABC transport system ATP-bin... 175 5e-43
pir||JC5348 cdd4 protein - Clostridium difficile >gi|1770140|emb... 175 6e-43
pir||E72364 ABC transporter, ATP-binding protein - Thermotoga ma... 175 6e-43
pir||T36505 probable ABC-type transport system ATP-binding compo... 175 6e-43
gb|AAK41395.1| ABC transporter, ATP binding protein [Sulfolobus ... 175 8e-43
pir||S32908 hypothetical protein 4 - Streptomyces antibioticus >... 174 1e-42
gb|AAC72253.1| (U91581) LctF [Lactococcus lactis subsp. lactis] 174 1e-42
pir||E72384 ABC transporter, ATP-binding protein - Thermotoga ma... 173 2e-42
pir||T36523 probable ABC-type transport system ATP-binding prote... 173 2e-42
pir||A83142 probable ATP-binding component of ABC transporter PA... 173 2e-42
pir||E83222 NosF protein PA3394 [imported] - Pseudomonas aerugin... 172 4e-42
gb|AAC62423.1| (AF084104) NatA [Bacillus firmus] 172 5e-42
gb|AAC36155.1| (AF003632) PilH [Myxococcus xanthus] 172 5e-42
dbj|BAB04885.1| (AP001511) ABC transporter (ATP-binding protein)... 171 7e-42
pir||A39025 probable membrane protein, cpn60 5'-region - Synecho... 171 7e-42
pir||C69819 ABC transporter (ATP-binding protein) homolog yhaQ -... 171 9e-42
gb|AAK42768.1| ABC transporter, ATP binding protein [Sulfolobus ... 171 9e-42
sp|P46903|NATA_BACSU ATP-BINDING TRANSPORT PROTEIN NATA (NA+ ABC... 170 2e-41
emb|CAA75761.1| (Y15759) ORF1 [Streptomyces rochei] 170 2e-41
pir||H75077 abc transporter, ATP-binding protein PAB1696 - Pyroc... 170 2e-41
gi|11498626 ABC transporter, ATP-binding protein [Archaeoglobus ... 169 3e-41
emb|CAC11986.1| (AL445065) ABC transporter cdd4-like protein Scn... 169 3e-41
gi|11498611 ABC transporter, ATP-binding protein [Archaeoglobus ... 169 3e-41
gb|AAF99691.1|AF267498_1 (AF267498) MutF [Streptococcus mutans] 169 3e-41
pir||S74476 ABC-type transport protein slr1113 - Synechocystis s... 168 6e-41
pir||F82303 ABC transporter, ATP-binding protein VC0589 [importe... 168 6e-41
sp|P55476|NODI_RHISN NODULATION ATP-BINDING PROTEIN I >gi|218242... 168 8e-41
pir||C83188 probable ATP-binding component of ABC transporter PA... 168 8e-41
emb|CAB93668.1| (AJ276653) RumF protein [Ruminococcus gnavus] 168 1e-40
gb|AAG19009.1| (AE005000) daunorubicin resistance ABC transporte... 167 1e-40
pir||S76278 ABC-type transport protein sll0759 - Synechocystis s... 167 2e-40
pir||A70194 ABC transporter, ATP-binding protein homolog - Lyme ... 167 2e-40
pir||T36344 probable ABC-type transport system ATP-binding prote... 167 2e-40
pir||B64816 ABC-type transport protein ybhF - Escherichia coli >... 166 2e-40
sp|P75776|YBHF_ECOLI HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 166 2e-40
sp|P32010|DRRA_STRPE DAUNORUBICIN RESISTANCE ATP-BINDING PROTEIN... 166 3e-40
pir||B71030 probable ATP-binding transport protein - Pyrococcus ... 166 3e-40
emb|CAB94566.1| (AL359152) putative ABC transporter ATP-binding ... 166 3e-40
pir||B75076 daunorubicin resistance ATP-binding protein drra PAB... 165 5e-40
pir||I40516 spaF protein - Bacillus subtilis 164 9e-40
gb|AAB91597.1| (U09819) SpaF [Bacillus subtilis] 164 9e-40
pir||H72269 ABC transporter, ATP-binding protein - Thermotoga ma... 164 9e-40
gb|AAD16030.1| (AF082183) ABC transporter MutF [Streptococcus mu... 164 2e-39
emb|CAB76006.1| (AL157916) putative ABC transporter, ATP-binding... 164 2e-39
dbj|BAB08166.1| (AB030831) SrtF [Streptococcus pyogenes] 164 2e-39
dbj|BAB04009.1| (AP001508) ABC transporter (ATP-binding protein)... 163 2e-39
sp|Q58429|YA23_METJA HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 162 3e-39
emb|CAC11214.1| (AL445063) gliding motility protein (gldA) relat... 162 3e-39
sp|P36879|YADG_ECOLI HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 162 4e-39
sp|P72335|NODI_RHIS3 NODULATION ATP-BINDING PROTEIN I >gi|153162... 162 4e-39
pir||F72742 probable transport ATP-binding protein APE0471 - Aer... 162 6e-39
pir||T29454 ABC transport protein - Streptomyces coelicolor >gi|... 161 8e-39
emb|CAC08414.1| (AL392178) putative ABC transport system ATP-bin... 161 8e-39
gb|AAK40417.1| ABC transporter, ATP binding protein [Sulfolobus ... 161 1e-38
pir||S75436 hypothetical protein c05019 - Sulfolobus solfataricu... 161 1e-38
pir||H70610 probable ABC-typetransmembrane transport portein - M... 161 1e-38
dbj|BAA95019.1| (AB033992) ATP-binding protein [Streptomyces kas... 161 1e-38
emb|CAC08286.1| (AL392148) putative ABC transporter ATP-binding ... 160 2e-38
pir||T09008 cdd4-like protein ScnF - Streptococcus pyogenes >gi|... 160 2e-38
sp|P19844|NOSF_PSEST COPPER TRANSPORT ATP-BINDING PROTEIN NOSF >... 159 5e-38
sp|P23703|NODI_RHILO NODULATION ATP-BINDING PROTEIN I >gi|95215|... 159 5e-38
pir||H75288 ABC transporter, ATP-binding protein - Deinococcus r... 159 5e-38
pir||F82934 ABC transporter UU093 [imported] - Ureaplasma urealy... 157 1e-37
pir||F82572 sodium ABC transporter ATP-binding protein XF2329 [i... 157 1e-37
pir||S34187 probable ABC-type transport protein TnrB2 - Streptom... 157 1e-37
gi|11498898 ABC transporter, ATP-binding protein [Archaeoglobus ... 157 1e-37
dbj|BAB10070.1| (AB010069) contains similarity to ABC transporte... 157 2e-37
gb|AAF81232.1| (AF263012) ABC transporter ATP binding protein [S... 155 4e-37
emb|CAB75312.1| (AL139164) putative ABC transporter ATP-binding ... 155 6e-37
pir||T18288 ABC transport protein - slime mold (Dictyostelium di... 155 7e-37
pir||B83294 probable ATP-binding component of ABC transporter PA... 154 1e-36
pir||T36316 probable ABC-type transport system ATP-binding prote... 154 1e-36
gb|AAC17172.1| (AF065141) ABC transporter ATP-binding protein ho... 153 2e-36
gb|AAC44025.1| (U47133) NosF protein [Sinorhizobium meliloti] >g... 152 4e-36
pir||C70529 probable ABC transporter - Mycobacterium tuberculosi... 152 5e-36
pir||T36764 probable ABC-type transport system ATP-binding prote... 152 6e-36
pir||E81337 ABC-transporter ATP-binding protein Cj0669 [imported... 152 6e-36
dbj|BAB16596.1| (AB037937) ABC2 [Rattus norvegicus] 151 8e-36
emb|CAB94564.1| (AL359152) putative ABC transporter ATP-binding ... 151 1e-35
pir||H72301 ABC transporter, ATP-binding protein - Thermotoga ma... 150 1e-35
prf||1914270A nodulation protein [Bradyrhizobium japonicum] 150 2e-35
pir||A59189 ATP-binding cassette transporter - human (fragment) ... 150 3e-35
gb|AAG09372.1|AF178941_1 (AF178941) ATP-binding cassette sub-fam... 150 3e-35
gb|AAG34388.1|AF197468_4 (AF197468) ATP/GTP binding protein; Nos... 150 3e-35
gb|AAG32068.1|AF317790_1 (AF317790) ATP-binding transporter AviA... 149 3e-35
pir||E70337 ABC transporter - Aquifex aeolicus >gi|2983089|gb|AA... 149 3e-35
gb|AAK41557.1| Antibiotic ABC transporter, ATP binding protein [... 148 6e-35
pir||S72783 probable ABC-type transport protein B1496_F3_97 - My... 148 6e-35
sp|P26050|NODI_BRAJA NODULATION ATP-BINDING PROTEIN I >gi|281683... 148 7e-35
pir||B75459 sodium extrusion protein NatA - Deinococcus radiodur... 148 7e-35
sp|P55339|ECSA_BACSU ABC-TYPE TRANSPORTER ATP-BINDING PROTEIN EC... 148 1e-34
gb|AAK42130.1| Antibiotic ABC transporter ATP binding protein [S... 147 1e-34
sp|P08720|NODI_RHILV NODULATION ATP-BINDING PROTEIN I >gi|78028|... 147 2e-34
pir||T07717 probable ABC-type transport protein T23J7.110 - Arab... 147 2e-34
emb|CAC08315.1| (AL392149) putative ABC transport system ATP-bin... 147 2e-34
pir||S73019 daunorubicin resistance protein drrA - Mycobacterium... 146 3e-34
sp|P41234|ABC2_MOUSE ATP-BINDING CASSETTE TRANSPORTER 2 >gi|1082... 146 3e-34
pir||T07713 probable ABC-type transport protein T23J7.70 - Arabi... 146 3e-34
pir||C72336 ABC transporter, ATP-binding protein - Thermotoga ma... 145 5e-34
pir||C75593 probable ABC transporter, ATP-binding protein - Dein... 145 5e-34
gb|AAC05632.1| (AF001945) rim ABC transporter [Homo sapiens] 145 6e-34
emb|CAA75729.1| (Y15635) ABCR [Homo sapiens] 145 6e-34
sp|P78363|ABCR_HUMAN RETINAL-SPECIFIC ATP-BINDING CASSETTE TRANS... 145 6e-34
gi|11421340 ATP-binding cassette, sub-family A member 4 [Homo sa... 145 6e-34
gi|4557876 ATP-binding cassette, sub-family A member 4; ATP bind... 145 8e-34
gb|AAC23915.1| (AF000148) ATP-binding cassette transporter [Homo... 144 1e-33
pir||T27121 hypothetical protein Y53C10A.9 - Caenorhabditis eleg... 144 1e-33
gb|AAF04137.1|AF191033_5 (AF191033) hypothetical ABC transporter... 144 1e-33
gb|AAC80570.1| (AF105431) NodI [Bradyrhizobium sp. SNU001] 143 2e-33
pir||T07716 probable ABC-type transport protein T23J7.100 - Arab... 143 2e-33
emb|CAB99138.1| (AL390188) putative ABC transport system ATP-bin... 143 2e-33
emb|CAC11378.1| (AL445063) gliding motility protein related [The... 143 2e-33
pir||E70871 hypothetical protein Rv1458c - Mycobacterium tubercu... 143 3e-33
sp|P26946|YATR_BACFI HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 142 4e-33
sp|P50332|NODI_RHIGA NODULATION ATP-BINDING PROTEIN I >gi|100191... 142 4e-33
gb|AAC02761.2| (AC002339) putative ABC transporter [Arabidopsis ... 142 4e-33
pir||T07714 probable ABC-type transport protein T23J7.80 - Arabi... 141 1e-32
dbj|BAB10074.1| (AB010069) contains similarity to ABC transporte... 141 1e-32
gi|6671495 ATP-binding cassette, sub-family A, member 4; ATP-bin... 139 3e-32
pir||T33783 hypothetical protein Y39D8C.1 - Caenorhabditis elega... 139 3e-32
pir||T36000 probable ABC-type transport system ATP-binding chain... 139 3e-32
emb|CAB88835.1| (AL353832) putative ABC-transport protein, ATP-b... 139 4e-32
pir||T36064 ABC-type transport system ATP-binding protein - Stre... 138 1e-31
gb|AAF49305.1| (AE003522) CG5944 gene product [Drosophila melano... 138 1e-31
gb|AAF49304.2| (AE003522) NUCB1 gene product [Drosophila melanog... 138 1e-31
gb|AAG35594.1|AF200948_1 (AF200948) ABC1 transporter [Leishmania... 138 1e-31
gb|AAC44357.1| (U43537) ATP-binding protein involved in mithramy... 137 1e-31
sp|P45073|YHBG_HAEIN PROBABLE ABC TRANSPORTER ATP-BINDING PROTEI... 136 3e-31
gb|AAF44814.1|AE003406_19 (AE003416) symbol=BG:DS00797.5; predic... 136 4e-31
pir||S42925 probable transport protein - Staphylococcus aureus >... 135 5e-31
pir||T22748 hypothetical protein F55G11.9 - Caenorhabditis elega... 135 5e-31
gb|AAC48716.1| (U90126) ABC transporter [Bos taurus] 135 7e-31
pir||A71243 probable maltose/maltodextrin transport ATP-binding ... 134 9e-31
pir||S42927 probable transport protein - Staphylococcus epidermi... 134 2e-30
pir||S42931 probable transport protein stpB - Staphylococcus hom... 134 2e-30
pir||A70039 ABC transporter (ATP-binding protein) homolog yvfR -... 134 2e-30
pir||H69746 ABC transporter (binding protein) homolog ybdA - Bac... 133 2e-30
pir||E82065 ABC transporter, ATP-binding protein VC2528 [importe... 132 4e-30
gi|11498586 osmoprotection protein (proV) [Archaeoglobus fulgidu... 132 5e-30
gb|AAF50837.1| (AE003568) CG1718 gene product [Drosophila melano... 132 5e-30
gb|AAA21451.1| (U01058) ABC family transporter [Entamoeba histol... 131 1e-29
pir||G71905 probable ABC transporter, ATP-binding protein - Heli... 131 1e-29
gb|AAF33771.1|AF219259_4 (AF219259) YhbG [Haemophilus ducreyi] 130 2e-29
gb|AAK43169.1| Arabinose ABC transporter, ATP-binding protein [S... 129 3e-29
gb|AAD32038.1|AF093787_6 (AF093787) ABC transporter homolog CylA... 129 3e-29
pir||E72378 sugar ABC transporter, ATP-binding protein - Thermot... 129 3e-29
pir||C64609 ABC transporter, ATP-binding protein - Helicobacter ... 129 4e-29
pir||C72615 probable transport ATP-binding protein APE1380 - Aer... 129 4e-29
pir||E71123 probable sugar transport ATP-binding protein - Pyroc... 129 5e-29
gi|10957143 Potential ABC transporter [Lactococcus lactis] >gi|1... 128 7e-29
emb|CAB94554.1| (AL359152) putative ABC transporter, ATP-binding... 128 7e-29
gi|11499564 ABC transporter, ATP-binding protein [Archaeoglobus ... 128 9e-29
gi|10956099 ABC transporter subunit PenJ [Pediococcus pentosaceu... 128 9e-29
gb|AAG21390.1|AF302051_4 (AF302051) ABC transporter ATP binding ... 128 9e-29
sp|P24693|YHBG_THIFE PROBABLE ABC TRANSPORTER ATP-BINDING PROTEI... 127 2e-28
pir||G71271 probable ABC transporter natA - syphilis spirochete ... 125 6e-28
gi|10954682 probable mikimopine transporter gene~similar to potA... 125 6e-28
pir||E69162 sulfate transport system ATP-binding - Methanobacter... 125 8e-28
pir||H71241 probable multiple sugar-binding transport ATP-bindin... 125 8e-28
pir||G71486 probable ABC transporter ATPase - Chlamydia trachoma... 125 8e-28
gb|AAB17558.1| (U72493) ATP binding protein [Chlamydia trachomatis] 124 1e-27
gb|AAF73520.1| (AE002271) ABC transporter, ATP-binding protein [... 124 1e-27
pir||B75207 multiple sugar-binding transport ATP-binding protein... 124 1e-27
pir||C65111 probable ABC transporter (ntrA/rpoN 5'region) - Esch... 123 2e-27
emb|CAC11868.1| (AL445065) ATP-binding protein related resistanc... 123 2e-27
pir||G64435 cobalt transport ATP-binding protein O homolog - Met... 123 2e-27
pir||H71006 probable ATP-binding transport protein - Pyrococcus ... 122 4e-27
emb|CAC00243.1| (AL160371) possible ABC transporter [Leishmania ... 122 5e-27
pir||G71014 probable dipeptide transport ATP-binding protein dpp... 122 7e-27
pir||G75117 dipeptide abc transporter, ATP-binding protein (dppf... 122 7e-27
sp|P31220|YHBG_ECOLI PROBABLE ABC TRANSPORTER ATP-BINDING PROTEI... 120 2e-26
pir||F72756 probable multiple sugar-binding transport ATP-bindin... 120 2e-26
gi|10955070 agtA [Agrobacterium tumefaciens] >gi|6689864|gb|AAF2... 119 4e-26
gb|AAD24578.1|AF126010_1 (AF126010) trehalose/maltose transport ... 119 5e-26
gb|AAD23570.1|AF121946_1 (AF121946) maltose transport protein Ma... 118 6e-26
pir||C72044 ABC transporter ATPase - Chlamydophila pneumoniae (s... 118 8e-26
pir||F71654 ABC transporter ATP-binding protein (abcT2) RP508 - ... 118 1e-25
emb|CAA11111.1| (AJ223088) hypothetical protein [Pseudomonas stu... 117 2e-25
pir||H72555 probable transporter ATP-binding protein APE1732 - A... 116 4e-25
sp|Q57855|Y412_METJA HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 115 7e-25
pir||E83087 probable ATP-binding component of ABC transporter PA... 115 7e-25
pir||H75151 abc transporter, ATP-binding protein PAB0249 - Pyroc... 115 9e-25
emb|CAC11826.1| (AL445065) probable sugar ABC transporter, ATP-b... 115 9e-25
gb|AAK41416.1| Sugar ABC transporter [Sulfolobus solfataricus] 114 1e-24
gi|11499064 ABC transporter, ATP-binding protein [Archaeoglobus ... 114 2e-24
pir||C71220 probable sugar-binding transport ATP-binding protein... 113 2e-24
pir||G69192 ABC transporter (glutamine transport ATP-binding pro... 113 3e-24
pir||F82386 amino acid ABC transporter, ATP-binding protein VCA1... 113 3e-24
pir||H72356 amino acid ABC transporter, ATP-binding protein - Th... 112 5e-24
emb|CAC11277.1| (AL445063) probable trehalose/maltose transport ... 112 5e-24
pir||G69043 cobalt transport ATP-binding protein O - Methanobact... 112 6e-24
pir||C70355 ABC transporter - Aquifex aeolicus >gi|2983231|gb|AA... 112 6e-24
pir||T45265 cobalt transport ATP-binding protein O homolog [impo... 111 8e-24
gi|11498623 ABC transporter, ATP-binding protein [Archaeoglobus ... 111 1e-23
pir||D75187 probable maltose/maltodextrin transport ATP-binding ... 111 1e-23
pir||F72421 iron(III) ABC transporter, ATP-binding protein - The... 110 2e-23
pir||G71192 probable cobalt transport ATP-binding protein - Pyro... 109 3e-23
pir||A72279 sugar ABC transporter, ATP-binding protein - Thermot... 109 3e-23
pir||H72272 sugar ABC transporter, ATP-binding protein - Thermot... 109 3e-23
sp|P94360|MSMX_BACSU PROBABLE MULTIPLE SUGAR-BINDING TRANSPORT A... 109 5e-23
gi|11498288 glutamine ABC transporter, ATP-binding protein (glnQ... 108 7e-23
dbj|BAA75384.1| (AB013374) MsmX [Bacillus halodurans] 108 9e-23
dbj|BAB04231.1| (AP001508) ABC transporter (ATP-binding protein)... 108 9e-23
pir||D64507 methyl coenzyme M reductase system, component A2 hom... 108 9e-23
pir||D69180 ABC transporter - Methanobacterium thermoautotrophic... 108 9e-23
gb|AAB99680.1| (U67606) methyl coenzyme M reductase system, comp... 108 9e-23
pir||E69812 ferrichrome ABC transporter (ATP-binding p) homolog ... 108 1e-22
gb|AAD03804.1| (AF047427) ATPase FbpC [Pasteurella haemolytica] 107 2e-22
gb|AAF48511.1| (AE003500) CG8473 gene product [Drosophila melano... 106 4e-22
pir||D70184 probable ribose/galactose ABC transporter mglA - Lym... 104 1e-21
pir||S76273 hypothetical protein - Synechocystis sp. (strain PCC... 103 3e-21
dbj|BAB01414.1| (AP000375) ABC transporter-like protein [Arabido... 91 2e-17
gi|6679297 P glycoprotein 2 [Mus musculus] >gi|126929|sp|P21440|... 86 6e-16
gi|4502457 ATP-binding cassette, sub-family B (MDR/TAP), member ... 85 7e-16
gb|AAD28285.1|AF136523_1 (AF136523) bile salt export pump [Homo ... 85 7e-16
gi|11430459 ATP-binding cassette, sub-family B (MDR/TAP), member... 85 7e-16
gi|6981354 P-glycoprotein 3/ multidrug resistance 2 [Rattus norv... 84 2e-15
sp|P23174|MDR3_CRIGR MULTIDRUG RESISTANCE PROTEIN 3 (P-GLYCOPROT... 83 5e-15
pir||T04229 ABC-type transport protein F14M19.30 - Arabidopsis t... 80 4e-14
pir||T42842 bile salt transport protein, ATP-dependent - rat >gi... 79 5e-14
pir||T42228 P-glycoprotein sister - rat >gi|3273484|gb|AAC24753.... 79 5e-14
>pir||E75122 hypothetical protein PAB1845 - Pyrococcus abyssi (strain Orsay)
>gi|5458205|emb|CAB49694.1| (AJ248285) hypothetical
protein [Pyrococcus abyssi]
Length = 305
Score = 596 bits (1519), Expect = e-169
Identities = 305/305 (100%), Positives = 305/305 (100%)
Query: 1 MKVIEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSV 60
MKVIEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSV
Sbjct: 1 MKVIEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSV 60
Query: 61 RLLGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLK 120
RLLGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLK
Sbjct: 61 RLLGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLK 120
Query: 121 LVGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQ 180
LVGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQ
Sbjct: 121 LVGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQ 180
Query: 181 KKQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYEIKVETKQP 240
KKQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYEIKVETKQP
Sbjct: 181 KKQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYEIKVETKQP 240
Query: 241 FPEIELPDVIRIEKIADNKVLIFAKSDIREILSEELSKRGITVLSLEIEEPSLEDVFLKT 300
FPEIELPDVIRIEKIADNKVLIFAKSDIREILSEELSKRGITVLSLEIEEPSLEDVFLKT
Sbjct: 241 FPEIELPDVIRIEKIADNKVLIFAKSDIREILSEELSKRGITVLSLEIEEPSLEDVFLKT 300
Query: 301 IYRRD 305
IYRRD
Sbjct: 301 IYRRD 305
>pir||H71008 probable ATP-binding transport protein - Pyrococcus horikoshii
>gi|3257789|dbj|BAA30472.1| (AP000006) 308aa long
hypothetical ATP-binding transport protein [Pyrococcus
horikoshii]
Length = 308
Score = 542 bits (1382), Expect = e-153
Identities = 266/305 (87%), Positives = 290/305 (94%)
Query: 1 MKVIEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSV 60
M IE+E LTKSYGKFKA+DNLS V++GI+FGFLGPNGAGKTTTILSMLGIIIPDSG V
Sbjct: 1 MYAIEVEKLTKSYGKFKAIDNLSFVVDEGIVFGFLGPNGAGKTTTILSMLGIIIPDSGDV 60
Query: 61 RLLGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLK 120
R+LGYDIFKEP+KAKERLGFLPENATIYEELTAWRNLDFFASFY + KQEKEKRIEELLK
Sbjct: 61 RILGYDIFKEPLKAKERLGFLPENATIYEELTAWRNLDFFASFYRMSKQEKEKRIEELLK 120
Query: 121 LVGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQ 180
LVGLWDVRYRK K+FSKGM+QRLLLAQALINDPELLILDEPTSGLDP+GARLVKDII EQ
Sbjct: 121 LVGLWDVRYRKAKTFSKGMRQRLLLAQALINDPELLILDEPTSGLDPEGARLVKDIIREQ 180
Query: 181 KKQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYEIKVETKQP 240
+KQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYEIK+ETKQP
Sbjct: 181 RKQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYEIKIETKQP 240
Query: 241 FPEIELPDVIRIEKIADNKVLIFAKSDIREILSEELSKRGITVLSLEIEEPSLEDVFLKT 300
PE+E+PD+IRIEK +NK +IFAKSDIRE +SEEL+K+GIT++SLEIEEPSLEDVFLKT
Sbjct: 241 LPELEIPDIIRIEKTTENKAIIFAKSDIRESISEELAKKGITIISLEIEEPSLEDVFLKT 300
Query: 301 IYRRD 305
IYRR+
Sbjct: 301 IYRRE 305
>pir||G71131 probable ATP-binding protein - Pyrococcus horikoshii
>gi|3257230|dbj|BAA29913.1| (AP000003) 312aa long
hypothetical ATP-binding protein [Pyrococcus horikoshii]
Length = 312
Score = 262 bits (662), Expect = 4e-69
Identities = 143/304 (47%), Positives = 202/304 (66%), Gaps = 8/304 (2%)
Query: 3 VIEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSVRL 62
VIE NLTK YG F AV ++ V +G +FGFLGPNGAGKTTTI + G++ P SG VR+
Sbjct: 7 VIEAINLTKYYGNFPAVRGVTFSVNEGEVFGFLGPNGAGKTTTIRMLTGVLKPTSGQVRV 66
Query: 63 LGYDIFKEP--IKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLK 120
LGYD+ +EP +KA++R+G +PE A Y +LTA +NL Y +PK E EKR ELLK
Sbjct: 67 LGYDMTREPEKLKARQRMGIVPEMANPYIDLTAMQNLKLMGELYGLPKWEIEKRSIELLK 126
Query: 121 LVGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQ 180
L L++ R KV+ FSKGM+QRL+LA A+I DPEL LDEPTSGLD AR++KDII ++
Sbjct: 127 LFELYEKRNIKVRGFSKGMRQRLVLAMAMIADPELYFLDEPTSGLDVISARIIKDIIRDE 186
Query: 181 KKQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYEIKVETKQP 240
KK GKT+F ++H +++ EL +++GII KGKL + T E +K+ E E+ ++
Sbjct: 187 KKAGKTIFLTTHNMNDANELCERIGIIRKGKLVAIDTPEGLKRLTKEHLSVEVSLKPMMF 246
Query: 241 FPEIELPDVIRIEKIADNKVLIFAK---SDIREILSEELSKRGITVLSLEIEEPSLEDVF 297
P + L +R+E++ D KV I+ ++EI+ E +R + ++S+ PSLEDVF
Sbjct: 247 DPSV-LSSALRVERLGD-KVKIYTNDPDKTVKEIV-EYAKERKLKIVSIRTLSPSLEDVF 303
Query: 298 LKTI 301
++ I
Sbjct: 304 VEII 307
>gi|11498736 ABC transporter, ATP-binding protein [Archaeoglobus fulgidus]
>gi|7445762|pir||G69391 ABC transporter, ATP-binding
protein homolog - Archaeoglobus fulgidus
>gi|2649451|gb|AAB90107.1| (AE001025) ABC transporter,
ATP-binding protein [Archaeoglobus fulgidus]
Length = 294
Score = 261 bits (661), Expect = 6e-69
Identities = 148/302 (49%), Positives = 194/302 (64%), Gaps = 11/302 (3%)
Query: 1 MKVIEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSV 60
M IE+ENLTK + F+A+D +SL VE+G IFGFLGPNGAGKTTTI LG+I P SGSV
Sbjct: 1 MAQIEVENLTKVFNGFRALDGISLVVERGEIFGFLGPNGAGKTTTINCCLGLIKPTSGSV 60
Query: 61 RLLGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLK 120
R+ G D+ ++P++ KE G+LPEN Y LTA +NL +F+ FY PK ++ELL
Sbjct: 61 RIAGMDVEEKPVEVKEICGYLPENYGFYPNLTARQNLLYFSEFYANPKD----NVDELLA 116
Query: 121 LVGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQ 180
LVGL D +KV FS+GMKQRL LAQALINDPE++ LDEPT+GLDPQG + II E
Sbjct: 117 LVGLQDSADKKVGEFSRGMKQRLALAQALINDPEVVFLDEPTNGLDPQGIADFRKIIREL 176
Query: 181 KKQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYEIKVETKQP 240
++GKT FFSSHILSEV E+ VGII +G++ VG + E+ E+ V+T+
Sbjct: 177 NQKGKTFFFSSHILSEVREVCSVVGIINRGRIVKVGKISELS------GSMEVVVQTEPR 230
Query: 241 FPEIELPDVIRIEKIADNKV-LIFAKSDIREILSEELSKRGITVLSLEIEEPSLEDVFLK 299
E L + +E V +I +SD R +S L + G V L + EPSLE ++L
Sbjct: 231 ADESLLREFGEVEYDESRDVYVIKVESDCRVEISRTLFEHGFVVKELSLREPSLEKIYLS 290
Query: 300 TI 301
+
Sbjct: 291 MV 292
>pir||C71197 probable ATP-binding transport protein - Pyrococcus horikoshii
>gi|3258287|dbj|BAA30970.1| (AP000007) 318aa long
hypothetical ATP-binding transport protein [Pyrococcus
horikoshii]
Length = 318
Score = 235 bits (593), Expect = 5e-61
Identities = 133/316 (42%), Positives = 196/316 (61%), Gaps = 23/316 (7%)
Query: 1 MKVIEIENLTKSYGK-----------FKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSM 49
M VIE+ NL K Y K F+A+ ++ V+KG +FG LGPNGAGKTTTI +
Sbjct: 1 MNVIEVRNLRKLYPKKIPLPFRKVEWFEALKGITFRVKKGELFGLLGPNGAGKTTTIKIL 60
Query: 50 LGIIIPDSGSVRLLGYDIFKEPIKAKERLGFLPENA-TIYEELTAWRNLDFFASFYNIPK 108
++ P SG ++LG D+ K+ + ++R+ + E T+Y LTA+ NL +FAS Y IP+
Sbjct: 61 TTLLEPSSGEAKVLGLDVVKDAREIRKRINLVAEGERTLYWRLTAYENLRYFASIYYIPR 120
Query: 109 QEKEKRIEELLKLVGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQ 168
+E EKRIEELLK+VGLWD R V ++S+GMKQRL +A+ALINDPE+L LDEPT GLD Q
Sbjct: 121 REAEKRIEELLKMVGLWDRRNDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQ 180
Query: 169 GARLVKDIILE-QKKQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYME 227
A V++++ ++GKTV ++H ++E EEL D++ II GK+ + T E +K+
Sbjct: 181 SAVFVRELVRRLVDEEGKTVLLTTHYMNEAEELCDRIAIIDHGKIIALNTPEGLKRMVRN 240
Query: 228 LEGYEIKVETKQPFPEIELPDVIRIEKIADNKVLIFAKSDIRE----ILSEELSKRGITV 283
E++V +P + + + K+ D ++ + + E L E L K V
Sbjct: 241 DTIVEVRVRN---YPGV---NPFGLVKVDDRNGVVILRGSLEEEEIPKLVEFLVKSNAKV 294
Query: 284 LSLEIEEPSLEDVFLK 299
LS+E++EP+LEDVF+K
Sbjct: 295 LSVEVKEPTLEDVFIK 310
>pir||H75157 daunorubicin resistance ATP-binding protein (drra-2) PAB2068 -
Pyrococcus abyssi (strain Orsay)
>gi|5457853|emb|CAB49343.1| (AJ248284) daunorubicin
resistance ATP-binding protein (drrA-2) [Pyrococcus
abyssi]
Length = 318
Score = 225 bits (568), Expect = 4e-58
Identities = 133/314 (42%), Positives = 194/314 (61%), Gaps = 19/314 (6%)
Query: 1 MKVIEIENLTKSYGK-----------FKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSM 49
MK IE++NL K Y K F+A+ ++ V+KG +FG LGPNGAGKTTTI +
Sbjct: 1 MKAIEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKIL 60
Query: 50 LGIIIPDSGSVRLLGYDIFKEPIKAKERLGFLPENA-TIYEELTAWRNLDFFASFYNIPK 108
++ P SG R+LG+DI KE + ++R+ + E T+Y LTA+ NL +FAS Y +PK
Sbjct: 61 TTLLEPTSGEARVLGFDIVKEAREIRKRINLVAEGERTLYWRLTAYENLRYFASIYYVPK 120
Query: 109 QEKEKRIEELLKLVGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQ 168
+ E+RI LL +VGLWD + V ++S+GMKQRL +A+ALINDPE+L LDEPT GLD Q
Sbjct: 121 KVAEERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQ 180
Query: 169 GARLVKDIILE-QKKQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYME 227
A V+++I + +++ KTV ++H + E EEL D++ II G++ + T E +KK +
Sbjct: 181 SAIFVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRIIALDTPEGLKKLVRK 240
Query: 228 LEGYEIKVETKQPFPEIELPDVIRIEKIADNKVLIFAKSDIREI--LSEELSKRGITVLS 285
E++V+ E P + K KV++ D +I L E L K VLS
Sbjct: 241 DTIVEVRVKNYNG----ENPFGLAKIKEEGEKVVLRGPLDEEDIPKLVEFLVKNNAKVLS 296
Query: 286 LEIEEPSLEDVFLK 299
+E++EP+LEDVF+K
Sbjct: 297 VEVKEPTLEDVFIK 310
>emb|CAB37661.1| (AJ224479) cdd4-like protein [Bacillus sphaericus]
Length = 311
Score = 213 bits (538), Expect = 1e-54
Identities = 123/305 (40%), Positives = 192/305 (62%), Gaps = 21/305 (6%)
Query: 3 VIEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSVRL 62
+++ +NL+K++GK +AV N++L++ KG I+GFLGPNGAGKTTTI +LG++ P SG++++
Sbjct: 12 IVQTQNLSKNFGKEQAVSNINLQIRKGEIYGFLGPNGAGKTTTIRMLLGLMKPSSGTIKI 71
Query: 63 LGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLKLV 122
DI K+ I+ +G L EN + Y LTA+ NL+ +PK RI+E+L+ V
Sbjct: 72 FQKDIVKDRIQILANVGSLVENPSYYPHLTAYENLEALRKILGVPK----TRIDEVLQTV 127
Query: 123 GLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILE-QK 181
L + +KVK FS GMKQRL +A AL+++PELLILDEPT+GLDP G ++++I K
Sbjct: 128 RLKEAANKKVKGFSLGMKQRLGIAAALLHNPELLILDEPTNGLDPSGIIEIRNLIKRLPK 187
Query: 182 KQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYEIKVETK--- 238
+ G T+ SSH+LSE++++A +VGI+ KG L ++E ++K +++ K
Sbjct: 188 EYGMTIIISSHLLSEIDQMATQVGIVSKGTLIFQDSIEGMRKFAQPKVTFKVSNGEKGWR 247
Query: 239 ----QPFPEIELPDVIRIEKIADNKVLIFAKSDIREILSEELSKRGITVLSLEIEEPSLE 294
DVI +E+ +D KV + I ++L +E GI+V +E E+ SLE
Sbjct: 248 SLLANGIKANYQDDVIFLEECSDEKV-----AHIVQVLVQE----GISVFRVEEEKRSLE 298
Query: 295 DVFLK 299
D+FL+
Sbjct: 299 DIFLQ 303
>pir||E75108 daunorubicin resistance ATP-binding protein (drra-1) PAB1923 -
Pyrococcus abyssi (strain Orsay)
>gi|5458093|emb|CAB49582.1| (AJ248285) daunorubicin
resistance ATP-binding protein (drrA-1) [Pyrococcus
abyssi]
Length = 328
Score = 212 bits (535), Expect = 3e-54
Identities = 124/306 (40%), Positives = 187/306 (60%), Gaps = 13/306 (4%)
Query: 1 MKVIEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSV 60
M IE+ENL K YG F AV +S +V+KG IF FLGPNGAGKTTT+ + ++ P SG
Sbjct: 1 MYAIEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKA 60
Query: 61 RLLGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLK 120
+ G+D+ KEP + ++++G + ++ ++ ELTA+ N+ Y + +E +++IEELLK
Sbjct: 61 IVAGHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLK 120
Query: 121 LVGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQ 180
V LW + R VK FS GM++RL +A+ALI++PE+L LDEPT GLDPQ + + I
Sbjct: 121 FVELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTM 180
Query: 181 KKQGK-TVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYEIKVETKQ 239
K++ + T+F ++H + E E+LAD++ II GK+ GT EE+KK L G +I + K
Sbjct: 181 KEEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKK----LVGNDI-IYLKL 235
Query: 240 PFPEIEL----PDVIR-IEKIADNKVLIFAKSDIREI--LSEELSKRGITVLSLEIEEPS 292
P+ EL D IR + + D +V I ++ + L E K + +L + P+
Sbjct: 236 ESPKEELKCLKADFIRGCKLLPDGRVRIDVENATEALPKLFELAQKNNVKILEVTYHRPT 295
Query: 293 LEDVFL 298
L DVFL
Sbjct: 296 LNDVFL 301
>pir||C71081 probable resistance ATP-binding protein - Pyrococcus horikoshii
>gi|3257326|dbj|BAA30009.1| (AP000004) 324aa long
hypothetical resistance ATP-binding protein [Pyrococcus
horikoshii]
Length = 324
Score = 211 bits (531), Expect = 1e-53
Identities = 119/307 (38%), Positives = 185/307 (59%), Gaps = 19/307 (6%)
Query: 1 MKVIEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSV 60
++ I +ENL K YG F+AV +S +V +G IF FLGPNGAGKTTT+ + ++ P SG
Sbjct: 4 VEAIIVENLVKKYGDFEAVRGISFKVRRGEIFAFLGPNGAGKTTTVHMLTTLLKPTSGRA 63
Query: 61 RLLGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLK 120
+ G+D+ KE + ++++G + ++ ++ ELTAW N+ Y + QE +K+IEELLK
Sbjct: 64 IVAGHDVVKESREVRKKIGVVFQDPSVDRELTAWENMYIHGRIYGLKGQELKKKIEELLK 123
Query: 121 LVGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQ 180
V LW+ + R+VK FS GM++RL +A+ALI++PE+L LDEPT GLDPQ + + I
Sbjct: 124 FVELWEFKDRQVKYFSGGMQRRLEIARALIHEPEVLFLDEPTIGLDPQTRAHIWEYIKTM 183
Query: 181 KKQ-GKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYEIKVETKQ 239
K++ T+F ++H + E E+LAD++ II GK+ GT EE+KK L G +I
Sbjct: 184 KEEHDMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTAEELKK----LVGNDI------ 233
Query: 240 PFPEIELPDVIRIEKIADNKVL--------IFAKSDIREILSEELSKRGITVLSLEIEEP 291
+ + E P I+ E I KVL + ++ ++ E+ + + +L + P
Sbjct: 234 IYVKFEKPTCIQAEFIRGCKVLNNGRVALEVKNAAEALPLVFEKAREMELKILEVTYHRP 293
Query: 292 SLEDVFL 298
+L DVFL
Sbjct: 294 TLNDVFL 300
>pir||D72484 probable ATP-binding protein APE2516 - Aeropyrum pernix (strain
K1) >gi|5106221|dbj|BAA81532.1| (AP000064) 323aa long
hypothetical ATP-binding protein [Aeropyrum pernix]
Length = 323
Score = 210 bits (528), Expect = 2e-53
Identities = 117/312 (37%), Positives = 183/312 (58%), Gaps = 16/312 (5%)
Query: 4 IEIENLTKSYGK---------FKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIII 54
+E E L K Y +A+D + L+V +G +F LGPNGAGKTT + + +++
Sbjct: 5 VEAEALVKEYRMGLLPWRARTIRALDGVDLKVGRGTLFSLLGPNGAGKTTLVKILSTLLL 64
Query: 55 PDSGSVRLLGYDIFKEPIKAKERLGF-LPENATIYEELTAWRNLDFFASFYNIPKQEKEK 113
PDSG R+ G+D+ +E + R+G L +Y L+ W NL FF+ Y IP +E ++
Sbjct: 65 PDSGWARVAGFDVVREANNVRSRIGVVLGGERALYWRLSGWDNLWFFSQLYGIPPREAKR 124
Query: 114 RIEELLKLVGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLV 173
R++ELL++VGL + + +V+++SKGMKQRL +A+ LINDPE+L+LDEPT GLDP+ AR V
Sbjct: 125 RVKELLEIVGLEEWAHVRVENYSKGMKQRLHIARGLINDPEVLLLDEPTIGLDPKAAREV 184
Query: 174 KDIILEQKKQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYEI 233
+ II ++G+TV ++H + E EEL+D+V II KG++ G E++K E+
Sbjct: 185 RSIIRRIVREGRTVLLTTHYMVEAEELSDRVAIISKGRIVAEGPPEDLKSLVGGESVIEL 244
Query: 234 KVETKQPFPEI------ELPDVIRIEKIADNKVLIFAKSDIREILSEELSKRGITVLSLE 287
KV + + V+ + +VL+ E L EL++ ++ L+
Sbjct: 245 KVMGGDRVSMLLERLGGRVISVVERDGARVFRVLVSEPDSFIEALLAELTRINASIRGLD 304
Query: 288 IEEPSLEDVFLK 299
+ PSLEDVF+K
Sbjct: 305 VRSPSLEDVFIK 316
>pir||C69049 ABC transporter (ATP-binding protein) - Methanobacterium
thermoautotrophicum (strain Delta H)
>gi|2622479|gb|AAB85847.1| (AE000900) ABC transporter
(ATP-binding protein) [Methanobacterium
thermoautotrophicum]
Length = 319
Score = 208 bits (525), Expect = 5e-53
Identities = 108/299 (36%), Positives = 180/299 (60%), Gaps = 1/299 (0%)
Query: 3 VIEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSVRL 62
+IE+E+++KS+G+ +A+DNLS V +G + G +G NGAGKTT I + GI+ PDSG+VR+
Sbjct: 18 MIEVESVSKSFGRIRALDNLSFSVAEGELMGIIGHNGAGKTTAIRIIAGILHPDSGTVRV 77
Query: 63 LGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLKLV 122
G+D+ ++P+ K +G+LPE +YE A L +F Y +P+ + RI ELL+LV
Sbjct: 78 GGHDVTEDPLSVKSMIGYLPEEPNLYERFRAGDLLRYFGELYGVPRDVLDDRIAELLELV 137
Query: 123 GLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQKK 182
G+ D + +FSKG++QR+ +A+ALI+DP ++I DEPT GLDP A +++ I K
Sbjct: 138 GMTDRAMDPINTFSKGLRQRIGIARALIHDPPIIIFDEPTMGLDPATAFSIREFI-RDLK 196
Query: 183 QGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYEIKVETKQPFP 242
KT+ +H + E E L D+V II +G++ +GT +E+K + E+KV
Sbjct: 197 GSKTMILCTHYMEEAEYLCDRVAIINQGRILDIGTPDELKSKIRGDLVLEVKVRDISSVG 256
Query: 243 EIELPDVIRIEKIADNKVLIFAKSDIREILSEELSKRGITVLSLEIEEPSLEDVFLKTI 301
E +L + ++ + + + + R +S + + G V + E +L DVF++++
Sbjct: 257 EGDLMMIPGVKSVEVDGSTLRVSLENRGAISGVIMELGANVSGVNTREATLNDVFIESL 315
>pir||B69065 ABC transporter (ATP-binding, daunorubicin resistance) -
Methanobacterium thermoautotrophicum (strain Delta H)
>gi|2622603|gb|AAB85962.1| (AE000909) ABC transporter
(ATP-binding [Methanobacterium thermoautotrophicum]
Length = 350
Score = 206 bits (520), Expect = 2e-52
Identities = 125/346 (36%), Positives = 187/346 (53%), Gaps = 46/346 (13%)
Query: 4 IEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSVRLL 63
IE +LTK YG FKAVD+L++++EK IFGFLGPNGAGKTTTI + +I P SG+ R+
Sbjct: 5 IETFDLTKVYGDFKAVDSLNMKIEKNSIFGFLGPNGAGKTTTIKMLTCLIPPSSGTARVA 64
Query: 64 GYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLKLVG 123
GYDI K P + ++++G +P+ ++YE+LTA N++ A FY +P+ KE RIEEL++LV
Sbjct: 65 GYDILKNPDEVRQQIGMVPQKVSLYEDLTARENVEMCADFYGMPEDLKESRIEELMELVD 124
Query: 124 LWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQKKQ 183
+ + V S G +Q++ L +LI+ P++L LDEPT GLDP R++ D+I E
Sbjct: 125 IKYAADKPVGQMSGGQQQKVSLVASLIHQPDILFLDEPTIGLDPTTKRVLWDLIDELNSS 184
Query: 184 GKTVFFSSHILSEVEELADKVGIIVKGKLRTVGT-------------------------- 217
G T+ SH + EVE L D VGII +G L T
Sbjct: 185 GHTIILCSHDMYEVELLCDYVGIINQGVLAAFDTPQGLKDTVIKEEESLRAKEIGGILDR 244
Query: 218 ------------LEEIKKQYMELEGYEIKV----ETKQPFPEIE-LPDVIRIEKIADNKV 260
++EIKK G EI + T E+E LP + ++K ++
Sbjct: 245 IDKETPESERRAIQEIKKSERICAGKEISMLIVNLTDDLLSELEALPVTLDVKKHHTGRI 304
Query: 261 LIFAKSDIREILSEELS---KRGITVLSLEIEEPSLEDVFLKTIYR 303
++ +++ L+ + + S+ ++PSLEDVF+K R
Sbjct: 305 ILELDETCETAVNDVLAAVIRNNARITSISTKDPSLEDVFMKVTGR 350
>gb|AAK42315.1| ABC transporter, ATP binding protein. [Sulfolobus solfataricus]
Length = 339
Score = 205 bits (517), Expect = 4e-52
Identities = 110/303 (36%), Positives = 186/303 (61%), Gaps = 10/303 (3%)
Query: 4 IEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSVRLL 63
I+ NLTK +GKF AVD+++ EV +G IFGFLGPNGAGK+TTI + ++ P G+ +
Sbjct: 12 IKAINLTKRFGKFVAVDHINFEVYEGEIFGFLGPNGAGKSTTIKMLTTVLKPSEGTATVS 71
Query: 64 GYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLKLVG 123
GYD+ K+P ++ +G +P+ T E+LT W N+ A Y IPK+ E+R +ELL++V
Sbjct: 72 GYDVIKQPALVRQSIGVVPQEYTADEDLTGWENMMMMAGLYGIPKRIAEERAKELLEMVE 131
Query: 124 LWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQKKQ 183
L RKV+++S GM++RL +A +LI+ P +L LDEPT GLD Q + I++ K++
Sbjct: 132 LTYAAKRKVETYSGGMRRRLEIAMSLISRPRILFLDEPTLGLDAQTRAAIWQYIMKLKEE 191
Query: 184 GK-TVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYEIKVETKQPFP 242
K T+F ++H L E + D++ II KGK+ +G+ +E+K+ ++ G + ++T
Sbjct: 192 YKMTIFVTTHYLEEADMYGDRIAIIDKGKILAIGSPKELKE---KVGGDVVSLQTSNDEL 248
Query: 243 EIEL-----PDVIRIEKIADN-KVLIFAKSDIREILSEELSKRGITVLSLEIEEPSLEDV 296
I++ ++ + K +D ++ + + + E L K GI V + I EP++++V
Sbjct: 249 AIKIISSSKDGILDVRKASDGIRIKVRNGEEKAPEILESLVKNGIKVSRMSITEPTMDEV 308
Query: 297 FLK 299
+++
Sbjct: 309 YME 311
>pir||S74048 probable daunorubicin resistance protein - Sulfolobus solfataricus
>gi|1707742|emb|CAA69462.1| (Y08256) daunorubicin
resistance ATP-binding protein DrrA [Sulfolobus
solfataricus]
Length = 339
Score = 205 bits (517), Expect = 4e-52
Identities = 110/303 (36%), Positives = 186/303 (61%), Gaps = 10/303 (3%)
Query: 4 IEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSVRLL 63
I+ NLTK +GKF AVD+++ EV +G IFGFLGPNGAGK+TTI + ++ P G+ +
Sbjct: 12 IKAINLTKRFGKFVAVDHINFEVYEGEIFGFLGPNGAGKSTTIKMLTTVLKPSEGTATVS 71
Query: 64 GYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLKLVG 123
GYD+ K+P ++ +G +P+ T E+LT W N+ A Y IPK+ E+R +ELL++V
Sbjct: 72 GYDVIKQPALVRQSIGVVPQEYTADEDLTGWENMMMMAGLYGIPKRIAEERAKELLEMVE 131
Query: 124 LWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQKKQ 183
L RKV+++S GM++RL +A +LI+ P +L LDEPT GLD Q + I++ K++
Sbjct: 132 LTYAAKRKVETYSGGMRRRLEIAMSLISRPRILFLDEPTLGLDAQTRAAIWQYIMKLKEE 191
Query: 184 GK-TVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYEIKVETKQPFP 242
K T+F ++H L E + D++ II KGK+ +G+ +E+K+ ++ G + ++T
Sbjct: 192 YKMTIFVTTHYLEEADMYGDRIAIIDKGKILAIGSPKELKE---KVGGDVVSLQTSNDEL 248
Query: 243 EIEL-----PDVIRIEKIADN-KVLIFAKSDIREILSEELSKRGITVLSLEIEEPSLEDV 296
I++ ++ + K +D ++ + + + E L K GI V + I EP++++V
Sbjct: 249 AIKIISSSKDGILDVRKASDGIRIKVRNGEEKAPEILESLVKNGIKVSRMSITEPTMDEV 308
Query: 297 FLK 299
+++
Sbjct: 309 YME 311
>dbj|BAB06933.1| (AP001518) ABC transporter (ATP-binding protein) [Bacillus
halodurans]
Length = 318
Score = 203 bits (511), Expect = 2e-51
Identities = 116/302 (38%), Positives = 177/302 (58%), Gaps = 8/302 (2%)
Query: 3 VIEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSVRL 62
+I++ +TK Y AVD+LSL + KG IFG LGPNGAGKTT+IL MLG+ P SG+V++
Sbjct: 5 IIKLNEITKRYDDHYAVDHLSLSIRKGEIFGLLGPNGAGKTTSILMMLGLSEPTSGTVQV 64
Query: 63 LGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLKLV 122
G D K PI+ K ++G+LP+N Y ++T NL + AS I K E +R LL+ V
Sbjct: 65 AGIDSTKYPIEVKRKVGYLPDNVGFYPDMTGMENLLYTASLNGIQKIEAIERANTLLEKV 124
Query: 123 GLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILE-QK 181
GL + +K +S+GMKQRL LA L+ PE++ILDEPT G+DP+G R +I +
Sbjct: 125 GLTEAAKKKTGQYSRGMKQRLGLADVLMKGPEIIILDEPTLGIDPEGVRDFLHLIRNLNQ 184
Query: 182 KQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYEIKVETKQPF 241
+ TV SH L +V+++ D+VGI V GKL G L+++ K+ + E I V P
Sbjct: 185 NENLTVLLCSHHLHQVQQVCDRVGIFVDGKLLAYGDLDQLVKRLFKHESVVIHV-AASPI 243
Query: 242 PEIELPDVIRIEK------IADNKVLIFAKSDIREILSEELSKRGITVLSLEIEEPSLED 295
E L + IE+ I ++++ I+ + D +S+ + + G + L + L++
Sbjct: 244 DESLLNQLKTIEQVKNVDVIQEDRLDIYCREDASATISKLIVESGSNLYHLYKKHFGLDE 303
Query: 296 VF 297
++
Sbjct: 304 IY 305
>sp|P22040|Y415_SYNY3 HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PROTEIN SLL0415
>gi|7445812|pir||S74323 ABC-type transport protein
sll0415 - Synechocystis sp. (strain PCC 6803)
>gi|1001104|dbj|BAA10241.1| (D64001) ABC transporter
[Synechocystis sp.]
Length = 354
Score = 203 bits (511), Expect = 2e-51
Identities = 121/311 (38%), Positives = 187/311 (59%), Gaps = 18/311 (5%)
Query: 3 VIEIENLTKSYG-------KFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIP 55
V+E ++K Y K +++ LS+ V++G FG LGPNGAGKTT + +LG+I
Sbjct: 47 VVETWEISKIYRTGFWMNQKVESLKPLSIAVQQGETFGLLGPNGAGKTTLLKILLGVIRA 106
Query: 56 DSGSVRLLGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRI 115
G LLG I + K+R+G+LPENA Y+ LTAW LD+ S + I KQE+++RI
Sbjct: 107 SGGRGTLLGKPIGDR--QTKQRVGYLPENAYFYDFLTAWEFLDYIGSLFQIGKQERQRRI 164
Query: 116 EELLKLVGLWD--VRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLV 173
+ LVGL + ++++ +SKGM QR+ +AQALINDPE++ LDEP SGLDP G V
Sbjct: 165 LAMCDLVGLAQKTAKKKQLRQYSKGMLQRVGMAQALINDPEVVFLDEPMSGLDPLGRYQV 224
Query: 174 KDIILEQKKQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYEI 233
++IIL K+QGKT+FF+SHIL++VE++ D++ I+ +G+L G+L E+ EGYE+
Sbjct: 225 REIILSLKEQGKTIFFNSHILADVEQICDRIAILARGELLCSGSLAEVLGND---EGYEV 281
Query: 234 KVETKQPFPEIELPDVIRIEKIADNKVLIFAKSDIREILSEELSKRGITVLSLEIEEPSL 293
++ + E L + + + D+ + L + L ++S+ + PSL
Sbjct: 282 VLKGGE---EEALGKYLANLSQEQDVWHGHYQGDV-QALVDALPSLNARLISMNLARPSL 337
Query: 294 EDVFLKTIYRR 304
ED F++ + R
Sbjct: 338 EDYFIRQLRER 348
>sp|P42332|BCRA_BACLI BACITRACIN TRANSPORT ATP-BINDING PROTEIN BCRA
>gi|7445603|pir||S77627 bacitracin transport protein
bcrA - Bacillus licheniformis >gi|437315|gb|AAA99504.1|
(L20573) TTG start codon [Bacillus licheniformis]
Length = 306
Score = 199 bits (501), Expect = 3e-50
Identities = 120/300 (40%), Positives = 180/300 (60%), Gaps = 4/300 (1%)
Query: 3 VIEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSVRL 62
+I+ +LTK YG K+VD+L++ V++G I+GFLG NGAGKTTTI +LG+I P SG + +
Sbjct: 4 IIKTTDLTKMYGSQKSVDHLNINVKQGDIYGFLGRNGAGKTTTIRMLLGLIKPTSGQIEI 63
Query: 63 LGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLKLV 122
G + FK + R+G + E Y LTA NL A I K+ I+E+L++V
Sbjct: 64 FGENFFKNKKEILRRIGSIVEVPGFYANLTARENLLINAKIIGI---HKKNAIDEVLEIV 120
Query: 123 GLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILE-QK 181
GL + V FS GMKQRL +A+AL++ PELLILDEPT+GLDP G + ++ +I K
Sbjct: 121 GLQHETKKLVGKFSLGMKQRLGIARALLHYPELLILDEPTNGLDPIGIKEMRRLIHSLAK 180
Query: 182 KQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYEIKVETKQPF 241
++ T+F SSHILSE+E+L D VGII +GKL + +KK+ + +++ + K
Sbjct: 181 ERNITIFISSHILSEIEQLVDHVGIIHEGKLLEEIPFDHLKKRNRKYLEFQLSDQNKAVV 240
Query: 242 PEIELPDVIRIEKIADNKVLIFAKSDIREILSEELSKRGITVLSLEIEEPSLEDVFLKTI 301
+ D+ E D + +++ + L++ + GI VL + + E SLED F+K I
Sbjct: 241 LMEQHFDIHDYEVHQDGIIRVYSHLGQQGKLNKLFVENGIDVLKITMSEDSLEDYFVKLI 300
>pir||T31682 bcrA protein - Bacillus licheniformis >gi|4464278|gb|AAD21213.1|
(AF007865) BcrA [Bacillus licheniformis]
Length = 306
Score = 198 bits (498), Expect = 7e-50
Identities = 119/300 (39%), Positives = 179/300 (59%), Gaps = 4/300 (1%)
Query: 3 VIEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSVRL 62
+I+ +LTK YG K+VD+L++ V++G I+GFLG NGAGKTTTI +LG+I P SG + +
Sbjct: 4 IIKTTDLTKMYGSQKSVDHLNINVKQGDIYGFLGRNGAGKTTTIRMLLGLIKPTSGQIEI 63
Query: 63 LGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLKLV 122
G + FK + R+G + E Y LTA NL A I K+ I+E+L++V
Sbjct: 64 FGENFFKNKKEILRRIGSIVEVPGFYANLTARENLLINAKIIGI---HKKNAIDEVLEIV 120
Query: 123 GLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILE-QK 181
GL + V FS GMKQRL +A+AL++ PEL ILDEPT+GLDP G + ++ +I K
Sbjct: 121 GLQHETKKLVGKFSLGMKQRLGIARALLHYPELSILDEPTNGLDPIGIKEMRRLIHSLAK 180
Query: 182 KQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYEIKVETKQPF 241
++ T+F SSHILSE+E+L D VGII +GKL + +KK+ + +++ + K
Sbjct: 181 ERNITIFISSHILSEIEQLVDHVGIIHEGKLLEEIPFDHLKKRNRKYLEFQLSDQNKAVV 240
Query: 242 PEIELPDVIRIEKIADNKVLIFAKSDIREILSEELSKRGITVLSLEIEEPSLEDVFLKTI 301
+ D+ E D + +++ + L++ + GI VL + + E SLED F+K I
Sbjct: 241 LMEQHSDIHDYEVHQDGIIRVYSHLGQQGKLNKLFVENGIDVLKITMSEDSLEDYFVKLI 300
>pir||G69803 ABC transporter (ATP-binding protein) homolog yfiL - Bacillus
subtilis >gi|1817536|dbj|BAA11402.1| (D78508) YfiL
[Bacillus subtilis] >gi|2633155|emb|CAB12660.1| (Z99108)
similar to ABC transporter (ATP-binding protein)
[Bacillus subtilis]
Length = 311
Score = 197 bits (496), Expect = 1e-49
Identities = 114/305 (37%), Positives = 179/305 (58%), Gaps = 12/305 (3%)
Query: 3 VIEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSVRL 62
+++ EN+ K+YGK V +S ++KG FG LGPNGAGK+TTI + G++ DSG++ +
Sbjct: 1 MLQAENIKKAYGKKTIVKGISFSLKKGESFGLLGPNGAGKSTTISMISGLVPHDSGNITV 60
Query: 63 LGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLKLV 122
GY I KE KAK+++G +P+ +Y LTA NL F+ Y + E +KR E+L+ V
Sbjct: 61 GGYVIGKETAKAKQKIGIVPQEIALYPTLTAHENLMFWGKMYGLTHDEAKKRAAEVLEYV 120
Query: 123 GLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQKK 182
GL + K+++FS GMK+R+ + AL++ PELLI+DEPT G+DPQ + + + + +
Sbjct: 121 GLTERAKDKIETFSGGMKRRINIGAALMHKPELLIMDEPTVGIDPQSRNHILETVKQLNE 180
Query: 183 QGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYEIKVETKQPFP 242
G TV ++SH + EVE L D++GII +G++ +GT ++ + L G I T
Sbjct: 181 TGMTVIYTSHYMEEVEFLCDRIGIIDQGEMIAIGTKTDLCSR---LGGDTIIQLTVSGIN 237
Query: 243 EIELPDVIRIEKIADNKV-LIFAKSDIREI--------LSEELSKRGITVLSLEIEEPSL 293
E L + + + D V + K DI L E + I +LSL+++EP+L
Sbjct: 238 EAFLVAIRSLAHVNDVTVHELELKIDISAAHHEKVVTSLLAEATAHHINLLSLQVQEPNL 297
Query: 294 EDVFL 298
E +FL
Sbjct: 298 ERLFL 302
>emb|CAC11998.1| (AL445065) ABC transporter related protein [Thermoplasma
acidophilum]
Length = 334
Score = 197 bits (496), Expect = 1e-49
Identities = 120/307 (39%), Positives = 187/307 (60%), Gaps = 12/307 (3%)
Query: 1 MKVIEIENLTKSY-GKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGS 59
+ +I+ ENLTK Y G KAVD L++E+E+ I+G LG NGAGKTTTI + I P SG+
Sbjct: 6 LPIIKTENLTKIYPGGIKAVDGLNIEIEEAEIYGLLGKNGAGKTTTIKMLTTAIDPTSGN 65
Query: 60 VRLLGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELL 119
+ GYD+ K+ K + +G +P++ T +L NL ASFYNIPKQE E+RI++LL
Sbjct: 66 AIIGGYDLRKDKEKIRRIIGVVPQDLTTDADLKGVENLRMIASFYNIPKQEAEQRIKDLL 125
Query: 120 KLVGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQ-GARLVKDIIL 178
++V L D + V +S GM++RL L L+N P++L LDEPT GLD +++ K I
Sbjct: 126 EIVDLSDWGNKYVSQYSGGMRKRLELICGLVNSPKILFLDEPTLGLDVNTRSKMWKYIRD 185
Query: 179 EQKKQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYEIKVETK 238
QK+ G T+ +SH L EV++LAD++ II GK+ GT + +K L+G I +E
Sbjct: 186 IQKELGVTIILTSHYLEEVDQLADRISIIDHGKILITGTPDSLK---ASLKGDVITMEFN 242
Query: 239 QPFPEIEL----PDVIRIEKIADNKVLIFAKSDIREI--LSEELSKRGITVLSLEIEEPS 292
+ EL P + + D KV + ++ E+ + E L ++ ++ +++ +++PS
Sbjct: 243 S-MEDAELARSYPGSLEASVMGDAKVRMKVENSDTELPKILEYLLEKNVSPITINVKKPS 301
Query: 293 LEDVFLK 299
L++VFL+
Sbjct: 302 LDEVFLE 308
>emb|CAB60255.1| (AJ250862) MrsF protein [Bacillus sp. HIL-Y85/54728]
Length = 303
Score = 197 bits (495), Expect = 2e-49
Identities = 114/309 (36%), Positives = 182/309 (58%), Gaps = 28/309 (9%)
Query: 2 KVIEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSVR 61
+++ +LTK Y K +VD L+L + +G I+GFLGPNGAGKTTTI +LG+I P G++
Sbjct: 4 QIVVTHDLTKKYKKHTSVDGLNLRIRRGEIYGFLGPNGAGKTTTIRMLLGLIKPTKGNIE 63
Query: 62 LLGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLKL 121
+ G ++ K ++ +R+G L E+ T Y LT + NL+ +P+Q+ + E+L+
Sbjct: 64 IFGQNLNKNRLQILQRIGSLVESPTYYGNLTGYENLEAVRRLRGLPEQQ----VNEVLET 119
Query: 122 VGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQK 181
V L V R K +S GMKQRL +A AL++ P+LLILDEPT+GLDP G + ++++I E
Sbjct: 120 VRLSKVANRLTKEYSLGMKQRLGIAVALLSSPDLLILDEPTNGLDPSGIQEIRELIKELP 179
Query: 182 KQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYEIKVETKQPF 241
K G +V SSH+LSE++++A +VGII GK+ ++ + ++ ++P
Sbjct: 180 KSGMSVIVSSHLLSEIDQMATQVGIINNGKMIFQDSIASLHQK-------------RKPL 226
Query: 242 PEIELPDVIRIEKIADNKVL--------IFAKSDIREILSE---ELSKRGITVLSLEIEE 290
++ + DVI + I + K L ++ E +SE L G++V LE +
Sbjct: 227 LKVGVSDVIEAKTILNRKGLKVDLQKNYLWLSQTEPEFVSEINSILLHSGLSVFRLEEKT 286
Query: 291 PSLEDVFLK 299
SLED+FL+
Sbjct: 287 RSLEDIFLE 295
>pir||C72303 ABC transporter, ATP-binding protein - Thermotoga maritima (strain
MSB8) >gi|4981569|gb|AAD36105.1|AE001764_8 (AE001764)
ABC transporter, ATP-binding protein [Thermotoga
maritima]
Length = 293
Score = 197 bits (495), Expect = 2e-49
Identities = 116/300 (38%), Positives = 181/300 (59%), Gaps = 17/300 (5%)
Query: 1 MKVIEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSV 60
M V+E+ +LTK YGK + V+ ++ VE+G IFGF+GPNGAGKTTTI +LG+I PDSG
Sbjct: 1 MSVVEVRDLTKYYGKSRGVEGVTFSVEEGEIFGFIGPNGAGKTTTIRLLLGLIFPDSGLA 60
Query: 61 RLLGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLK 120
+ G D+ KE + ++ +G++P + Y E+T L + ASFY + K +
Sbjct: 61 EIFGKDVLKEGKEIRKNVGYIPGEVSFYPEVTVEEFLRYSASFYEKVDWDYVK------E 114
Query: 121 LVGLWDVRYRK-VKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILE 179
L G++ + +K +K S G K+++ + QAL++ P+LLILDEPT+GLDP +I+
Sbjct: 115 LCGVFSLDTKKRIKELSMGNKKKVAIVQALMHRPKLLILDEPTNGLDPIVQNTFFEILKN 174
Query: 180 QKKQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYEIKVETKQ 239
+K++G TVFFSSHILSEVE L D+V +I G++ V +E +K + ++ +K E +
Sbjct: 175 EKEKGTTVFFSSHILSEVERLCDRVAMIKDGRIIRVEKVENLKGERYKV--VRVKGENLE 232
Query: 240 PFPEIELPDVIRIEKIA-DNKVLIFAKSDIREILSEELSKRGITVLSLEIEEPSLEDVFL 298
+L D+ + ++ +N F S E L E L R + + +EEPSLE++F+
Sbjct: 233 -----KLKDLAEVNRLKFENGTAEFLFSGNVERLLEIL--RSLKLSDFWVEEPSLEEIFM 285
>pir||A75083 ATP-binding transport protein PAB1668 - Pyrococcus abyssi (strain
Orsay) >gi|5458478|emb|CAB49966.1| (AJ248286)
ATP-BINDING TRANSPORT PROTEIN [Pyrococcus abyssi]
Length = 315
Score = 195 bits (491), Expect = 5e-49
Identities = 102/267 (38%), Positives = 160/267 (59%), Gaps = 3/267 (1%)
Query: 3 VIEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSVRL 62
+IE + LTK +GK V NL+L+V KG ++GFLGPNGAGKTTTI + G + P G +++
Sbjct: 5 IIETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIKI 64
Query: 63 LGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLKLV 122
+G ++ +E +K +G++PE Y+++T + L + +PK + + EL+
Sbjct: 65 IGMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMAYT 124
Query: 123 GLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQKK 182
G+ + + K++ S G +QR+L A AL+ DPELLILDEPTS LDP G ILE K
Sbjct: 125 GVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILELAK 184
Query: 183 QGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYEIKVETKQPFP 242
GKTVF SSHI+SE+E + + VG+I G+L G + ++ K +E Y++ V +
Sbjct: 185 SGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAK--IESTDYDVVVSDNEKLL 242
Query: 243 EIELPDVIRIEKIADNKVLIFAKSDIR 269
+ L D I + ++ + + ++ K D R
Sbjct: 243 KF-LRDKIYVREVWEEEGIVRVKLDER 268
>pir||D72257 hypothetical protein TM1403 - Thermotoga maritima (strain MSB8)
>gi|4981967|gb|AAD36474.1|AE001793_4 (AE001793)
antibiotic ABC transporter, ATP-binding protein,
putative [Thermotoga maritima]
Length = 327
Score = 194 bits (488), Expect = 1e-48
Identities = 111/300 (37%), Positives = 180/300 (60%), Gaps = 8/300 (2%)
Query: 3 VIEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSVRL 62
+I +ENL K +G F+AV +S V+KG IF FLGPNGAGKTTTI + ++ P SG +
Sbjct: 4 IIVVENLVKKFGDFEAVKGVSFSVKKGEIFAFLGPNGAGKTTTIHMLTTLLKPTSGKAWV 63
Query: 63 LGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLKLV 122
G+D+ KEP + + ++G + ++ ++ ELTA+ N+ Y ++ +KRI ELL+ V
Sbjct: 64 AGHDVLKEPREVRRKIGIVFQDQSLDRELTAYENMYIHGKIYGYGGEKLKKRILELLEFV 123
Query: 123 GLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQKK 182
L + + + VK+FS GM +RL +A++LI++PE+L LDEPT GLDP + + I + KK
Sbjct: 124 ELLEFKDKPVKTFSGGMARRLEIARSLIHEPEVLFLDEPTIGLDPHTRAHMWEYISKMKK 183
Query: 183 Q-GKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYE-IKVETKQP 240
+ T+F ++H + E E+LAD+V II GK+ +GT E+K+ + G E I V +
Sbjct: 184 EHNMTIFLTTHYMDEAEQLADRVAIIDHGKIIALGTPTELKR----MVGKEIIYVRFSEA 239
Query: 241 FPEIELPDVIRIEKIADNKVLIFAKSDIREI--LSEELSKRGITVLSLEIEEPSLEDVFL 298
+E + K+ D ++ + + R I + E ++G+ + + +P+L DVFL
Sbjct: 240 VECLEGDFIESCRKLPDGRLELNVEDSGRAIPKIFELAQQKGLKIEEITYHKPTLNDVFL 299
>gi|11499468 daunorubicin resistance ATP-binding protein (drrA) [Archaeoglobus
fulgidus] >gi|7445660|pir||C69485 daunorubicin
resistance ATP-binding protein (drrA) homolog -
Archaeoglobus fulgidus >gi|2648659|gb|AAB89368.1|
(AE000972) daunorubicin resistance ATP-binding protein
(drrA) [Archaeoglobus fulgidus]
Length = 398
Score = 194 bits (488), Expect = 1e-48
Identities = 111/301 (36%), Positives = 180/301 (58%), Gaps = 7/301 (2%)
Query: 1 MKVIEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSV 60
M IE+ENL K +G F+AV +S +V++G IF FLGPNGAGKTTT+ + ++ P SG
Sbjct: 77 MYAIEVENLVKKFGDFEAVRGVSFKVKRGEIFAFLGPNGAGKTTTVHILTTLLKPTSGKA 136
Query: 61 RLLGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLK 120
+ G D+ +E + + R+G + ++ ++ +LTA+ N+ Y + +E +++IE LLK
Sbjct: 137 FVAGLDVVREAREVRRRIGIVFQDPSVDRDLTAYENMLVHGGVYGLKGKELKEKIERLLK 196
Query: 121 LVGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQ 180
V LW+ R + VK FS GM++RL +A++L++ PE+L LDEPT GLDPQ V I
Sbjct: 197 FVELWEFRDKLVKYFSGGMQRRLEIARSLLHHPEVLFLDEPTIGLDPQTRAHVWSYIEAM 256
Query: 181 K-KQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYEIKVETKQ 239
K +Q T+F ++H + E E+LAD+V II G++ G++EE+K+ + + +KVE
Sbjct: 257 KEEQDMTIFLTTHYMEEAEKLADRVAIIDHGRIIAEGSVEELKR-LVGSDVVYLKVENGA 315
Query: 240 PFPEIELPDVIRIEKIADNKVLIFAKSDIREI--LSEELSKRGITVLSLEIEEPSLEDVF 297
E L + + + D ++ I + I + E ++G+ +L + P+L DVF
Sbjct: 316 ECFETGLGNCV---VLPDGRIRIDVSNASEAIPKIFEIAREKGVRILEVTYHRPTLNDVF 372
Query: 298 L 298
L
Sbjct: 373 L 373
>dbj|BAB04164.1| (AP001508) ABC transporter (ATP-binding protein) [Bacillus
halodurans]
Length = 306
Score = 193 bits (485), Expect = 2e-48
Identities = 119/300 (39%), Positives = 177/300 (58%), Gaps = 11/300 (3%)
Query: 3 VIEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSVRL 62
+IE NLT +Y AVD ++L+V++G I+GFLGPNGAGKTTTI +LG+I GS+++
Sbjct: 7 LIETNNLTMTYKHVHAVDRINLKVKEGEIYGFLGPNGAGKTTTIRMLLGLIKASHGSIKI 66
Query: 63 LGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLKLV 122
G D+ + + + +G L E+ + Y L+ NL+ +PK RI E+L+LV
Sbjct: 67 FGKDLKQHRLDILKNIGALVESPSYYPHLSGEDNLETVRKIVKVPK----SRIAEVLELV 122
Query: 123 GLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILE-QK 181
L V RKV+ +S GMKQRL +A AL+ +P L+ILDEPT+GLDP G ++++IL K
Sbjct: 123 RLTKVADRKVQEYSLGMKQRLAIAAALLANPRLVILDEPTNGLDPAGIIEIRNLILRLPK 182
Query: 182 KQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYEIKVETKQPF 241
+ G TV SSH+LSEVE++A +VGII KGKL ++EE++K+ +I + T P
Sbjct: 183 EYGITVLLSSHLLSEVEQVASQVGIIAKGKLIFQDSIEELRKK----ANRKIFLSTSHPE 238
Query: 242 PEIELPDVIRIEKIADNKVLIFAKSDIREI--LSEELSKRGITVLSLEIEEPSLEDVFLK 299
+ I + L+ EI L + ++ I V + E SLE++FL+
Sbjct: 239 VAATILQERGINVDTQARGLVMNDRSDEEIAQLVKAFVEKDIDVYRISDETSSLEEIFLQ 298
>gb|AAF99566.1| (AF167161) unknown [Staphylococcus aureus]
Length = 309
Score = 191 bits (481), Expect = 7e-48
Identities = 119/297 (40%), Positives = 174/297 (58%), Gaps = 6/297 (2%)
Query: 3 VIEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSVRL 62
+IEI NLTK YG AV+NLS+ VE G I+GFLG NGAGKTTTI +LG+I P G++++
Sbjct: 7 IIEINNLTKQYGSQIAVNNLSITVESGQIYGFLGRNGAGKTTTIRMLLGLIKPTKGNIKI 66
Query: 63 LGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLKLV 122
+ + + +G + E Y LTA NL A I +KE IEE+L++V
Sbjct: 67 FEKEFESNKTEILKNIGAMVETPGFYSNLTAKENLTINAKILGI---QKENAIEEVLEIV 123
Query: 123 GLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILE-QK 181
GL + + K++S GMKQRL +A+AL+++PELLILDEPT+GLDP G + ++ +I + +
Sbjct: 124 GLASEKVKLFKNYSLGMKQRLGIARALLHNPELLILDEPTNGLDPIGIKEIRKLIKDLAQ 183
Query: 182 KQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYEIKVETKQPF 241
+ T+ SSHILSE+E+L DKVGII G L E++KK+ + + E K
Sbjct: 184 SRNITILISSHILSEIEQLVDKVGIIHNGVLLEEIMYEDLKKKNRQFISISVSDEEKVAC 243
Query: 242 PEIELPDVIRIEKIADN-KVLIFAKSDIREILSEELSKRGITVLSLEIEEPSLEDVF 297
+E I KI +N + I++ D ++ ++ L I V + + E LE F
Sbjct: 244 -LLETNFGIYDYKIKENGEFKIYSHIDRQQEINRLLVLNNIDVFQMRVIEDYLETYF 299
>gb|AAG20473.1| (AE005119) copper transport ATP-binding protein; NosF1
[Halobacterium sp. NRC-1]
Length = 304
Score = 189 bits (476), Expect = 3e-47
Identities = 112/300 (37%), Positives = 167/300 (55%), Gaps = 9/300 (3%)
Query: 1 MKVIEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSV 60
M IE+ ++K YG A+ +L++ V++G I+GFLGPNGAGK+T I +L + P +GS
Sbjct: 1 MPAIELSGVSKRYGDVTALTDLNITVDEGEIYGFLGPNGAGKSTAINILLDFVRPTTGSA 60
Query: 61 RLLGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLK 120
+LGYD + ++R+G LPE ++Y+ LTA ++++F N + LL
Sbjct: 61 TILGYDAQADSQAIRQRIGVLPEGFSVYDRLTARKHVEFAIDSKNATNDP-----DALLD 115
Query: 121 LVGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQ 180
VG+ + RK FS GM+QRL LA AL+ DPE+L+LDEP+SGLDP GAR ++ I+ E+
Sbjct: 116 RVGIPEAADRKAGGFSTGMRQRLGLAIALVGDPEMLLLDEPSSGLDPNGAREMRSILTEE 175
Query: 181 KKQGKTVFFSSHILSEVEELADKVGIIVKGKL---RTVGTLEEIKKQYMELEGYEIKVET 237
+G TVFFSSHIL +VE + D GI+ G L ++ L E L V
Sbjct: 176 ANRGTTVFFSSHILGQVEAICDHAGILQNGTLVAEDSIDALREATDATTTLTVTLDAVTD 235
Query: 238 KQPFPEIELPDVIRIEKIADNKVLIFAKSDIREILSEELSKRGITVLSLEIEEPSLEDVF 297
+P V + A + V+ + ++L + + G TV E+ SL+DVF
Sbjct: 236 DAVAAANAIPGVSEVSVDASDLVVRTGDASKTDVL-DAIESTGATVQDFATEDASLDDVF 294
>dbj|BAA75396.1| (AB013378) YhaQ [Bacillus halodurans]
Length = 314
Score = 189 bits (475), Expect = 4e-47
Identities = 107/301 (35%), Positives = 183/301 (60%), Gaps = 15/301 (4%)
Query: 1 MKVIEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSV 60
M++++ N+TK +G F A++ ++LEV++G I+GF+GPNGAGK+TTI +LGI+ G
Sbjct: 10 MEIVKATNVTKRFGAFTALNRINLEVQRGEIYGFIGPNGAGKSTTIRILLGILKASEGEA 69
Query: 61 RLLGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLK 120
++ G D++ + ++ + L ++P + +++ LT +D F +++ E K
Sbjct: 70 KIFGKDVWSDAVEIHKHLAYVPGDVSLWPNLTGGEVIDLFMKLRGSVDKKRRDHFIERFK 129
Query: 121 LVGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQ 180
L +K +++SKG +Q++ L A + +L ILDEPTSGLDP R+ ++ +LE
Sbjct: 130 LDPS-----KKCRTYSKGNRQKVALVAAFASGADLYILDEPTSGLDPLMERVFQECVLEA 184
Query: 181 KKQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYEIKVETKQP 240
K+ GK+V SSHILSEVE L DKVGII +G++ GTL+E++ L + V+TKQP
Sbjct: 185 KEAGKSVLLSSHILSEVERLCDKVGIIRQGEMIETGTLDELR----HLTRTTLVVKTKQP 240
Query: 241 FPEIELPDVIR--IEKIADNKVLIFAKSDIREILSEELSKRGITVLSLEIEEPSLEDVFL 298
P ++ + EK + A+S + E++ + +S+ G+ ++LE P+LED+F+
Sbjct: 241 IPALQEQKGVHDLAEKNGGFSFQVDAES-LDEVM-KYVSQYGL--ITLESAPPTLEDLFM 296
Query: 299 K 299
+
Sbjct: 297 R 297
>dbj|BAB04722.1| (AP001510) ABC transporter (ATP-binding protein) [Bacillus
halodurans]
Length = 305
Score = 189 bits (475), Expect = 4e-47
Identities = 107/301 (35%), Positives = 183/301 (60%), Gaps = 15/301 (4%)
Query: 1 MKVIEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSV 60
M++++ N+TK +G F A++ ++LEV++G I+GF+GPNGAGK+TTI +LGI+ G
Sbjct: 1 MEIVKATNVTKRFGAFTALNRINLEVQRGEIYGFIGPNGAGKSTTIRILLGILKASEGEA 60
Query: 61 RLLGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLK 120
++ G D++ + ++ + L ++P + +++ LT +D F +++ E K
Sbjct: 61 KIFGKDVWSDAVEIHKHLAYVPGDVSLWPNLTGGEVIDLFMKLRGSVDKKRRDHFIERFK 120
Query: 121 LVGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQ 180
L +K +++SKG +Q++ L A + +L ILDEPTSGLDP R+ ++ +LE
Sbjct: 121 LDPS-----KKCRTYSKGNRQKVALVAAFASGADLYILDEPTSGLDPLMERVFQECVLEA 175
Query: 181 KKQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYEIKVETKQP 240
K+ GK+V SSHILSEVE L DKVGII +G++ GTL+E++ L + V+TKQP
Sbjct: 176 KEAGKSVLLSSHILSEVERLCDKVGIIRQGEMIETGTLDELR----HLTRTTLVVKTKQP 231
Query: 241 FPEIELPDVIR--IEKIADNKVLIFAKSDIREILSEELSKRGITVLSLEIEEPSLEDVFL 298
P ++ + EK + A+S + E++ + +S+ G+ ++LE P+LED+F+
Sbjct: 232 IPALQEQKGVHDLAEKNGGFSFQVDAES-LDEVM-KYVSQYGL--ITLESAPPTLEDLFM 287
Query: 299 K 299
+
Sbjct: 288 R 288
>sp|P54592|YHCH_BACSU HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PROTEIN 2 IN GLPD-CSPB
INTERGENIC REGION >gi|7445695|pir||D69822 ABC
transporter (ATP-binding protein) homolog yhcH -
Bacillus subtilis >gi|1239983|emb|CAA65691.1| (X96983)
hypothetical protein [Bacillus subtilis]
>gi|2633231|emb|CAB12736.1| (Z99108) similar to ABC
transporter (ATP-binding protein) [Bacillus subtilis]
Length = 305
Score = 188 bits (472), Expect = 8e-47
Identities = 112/298 (37%), Positives = 186/298 (61%), Gaps = 9/298 (3%)
Query: 3 VIEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSVRL 62
V+E++N+TK+ +D+LS + +G +FGFLGPNGAGKTTTI M+G++ G V +
Sbjct: 4 VLELKNVTKNIRGRTIIDDLSFTIREGEVFGFLGPNGAGKTTTIRMMVGLMKLSKGDVLI 63
Query: 63 LGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLKLV 122
G I KE KA + +G + EN +Y+ L+ ++NL FA + K +++I+E+++LV
Sbjct: 64 CGQSITKEYAKAIKHIGAIVENPELYKFLSGYKNLQQFA---RMVKGVTKEKIDEVVELV 120
Query: 123 GLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILE-QK 181
GL D + KVK++S GM+QRL LAQ L++DP++LILDEPT+GLDP G R ++D + + +
Sbjct: 121 GLTDRIHDKVKTYSLGMRQRLGLAQCLLHDPKVLILDEPTNGLDPAGIREIRDHLKKLTR 180
Query: 182 KQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYEIKVETKQPF 241
++G V SSH+LSE+E + D++ I+ KGKL + +++ + E + Y +VE QP
Sbjct: 181 ERGMAVIVSSHLLSEMELMCDRIAILQKGKLIDIQNVKD--ENIDENDTYFFQVE--QPS 236
Query: 242 PEIELPDVIRIEKIADNKVLIFAKSDIREILSEELSKRGITVLSLEIEEPSLEDVFLK 299
+ + + + + AK ++ ++ E L + I + +++ SLED FL+
Sbjct: 237 EAATVLNQYDLLSKTNGVEIKLAKEEVPAVI-ELLVMQQIRIYEVKVITKSLEDRFLE 293
>pir||D72492 probable ABC transporter ATP-binding protein APE2579 - Aeropyrum
pernix (strain K1) >gi|5106285|dbj|BAA81596.1|
(AP000064) 333aa long hypothetical ABC transporter
ATP-binding protein [Aeropyrum pernix]
Length = 333
Score = 187 bits (470), Expect = 1e-46
Identities = 103/306 (33%), Positives = 176/306 (56%), Gaps = 16/306 (5%)
Query: 3 VIEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSVRL 62
++ E L K YG F+AVD +S + +G +F LGPNGAGKTTTI + ++ P SG +
Sbjct: 9 MVVAEELVKDYGGFRAVDGVSFRIARGELFSLLGPNGAGKTTTIKMLSTLLRPTSGEAWI 68
Query: 63 LGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLKLV 122
GY I +EP + +G +P++ T +E++ W N+ A Y +P E +R E+L +
Sbjct: 69 AGYSIVREPGNVRRVIGLVPQDLTADDEMSGWDNVYIQARLYGLPSSEARERTREVLDYL 128
Query: 123 GLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQKK 182
L + +R+V ++S GM+++L +A +L++ P++L LDEPT GLD R + I + K+
Sbjct: 129 DLMEAAHRRVATYSGGMRRKLEIAMSLVHSPKVLFLDEPTLGLDVHSRRSLWRYIEDLKR 188
Query: 183 QGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYEIKVETKQPFP 242
T+ ++H + E E L+D+V II +G++ GT EE+K + ++G + +E K P
Sbjct: 189 SAVTILLTTHYMEEAEMLSDRVAIIDRGRIVAEGTPEELKAR---VKGETVYIELKD--P 243
Query: 243 EIELPDVIRIEK-------IADNKVLIFAKSDIREILSEELSK--RGITVLSLEIEEPSL 293
E P V+ +++ + + KV + + D + L EL++ G V ++ I +L
Sbjct: 244 EYTEPLVLALKEKLGLEPSVVEGKVAV--RVDRADTLLPELARALNGFPVKAISITRATL 301
Query: 294 EDVFLK 299
EDVF++
Sbjct: 302 EDVFIE 307
>dbj|BAB04773.1| (AP001510) transposase (08)/ABC transporter (ATP-binding protein)
[Bacillus halodurans]
Length = 901
Score = 187 bits (470), Expect = 1e-46
Identities = 108/307 (35%), Positives = 183/307 (59%), Gaps = 5/307 (1%)
Query: 3 VIEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSVRL 62
+IE+ +L+K+Y + V +++ +EKG + G LGPNGAGK+TTI + +I P SG V +
Sbjct: 592 MIEVIDLSKTYRNRQVVKGINMFIEKGEMVGLLGPNGAGKSTTISMISSLIQPTSGDVLI 651
Query: 63 LGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLKLV 122
G I K+ + LG +P+ +Y +LTA NL FF Y + +E + R+E L+LV
Sbjct: 652 KGGSIHKQSKAIRSILGVVPQEIAVYHDLTARENLAFFGKIYGLKGEELKHRMESTLQLV 711
Query: 123 GLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQG-ARLVKDIILEQK 181
GL + + +V +FS GMK+RL +A AL+++PEL+I+DEPT G+DPQ + +++ + +
Sbjct: 712 GLEERQNDRVHTFSGGMKRRLNIAVALLHEPELIIMDEPTVGIDPQSRSHILETVKTLNQ 771
Query: 182 KQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYEIKVETKQPF 241
++ TV ++SH + EVE L D++ I+ +G++ GT +E+K + ++ E P
Sbjct: 772 EREMTVIYTSHYMEEVEYLCDRLYIMDRGEVIASGTKDEVKGILSSNQSIKLTTEMYSPR 831
Query: 242 PEIELPD--VIRIEKIADN--KVLIFAKSDIREILSEELSKRGITVLSLEIEEPSLEDVF 297
L D VI K+ + +++ + +I + L + G T+ S++I+ P+LEDVF
Sbjct: 832 FLTALQDHPVISSVKVMEQTFTIIVPKRENILDDLFMLAKETGTTLKSIDIQAPTLEDVF 891
Query: 298 LKTIYRR 304
L R+
Sbjct: 892 LHLTGRK 898
>dbj|BAA83955.1| (AB024563) YFIL [Bacillus halodurans]
Length = 310
Score = 186 bits (468), Expect = 2e-46
Identities = 108/307 (35%), Positives = 182/307 (59%), Gaps = 5/307 (1%)
Query: 3 VIEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSVRL 62
+IE+ +L+K+Y + V +++ +EKG + G LGPNGAGK+TTI + +I P SG V +
Sbjct: 1 MIEVIDLSKTYRNRQVVKGINMFIEKGEMVGLLGPNGAGKSTTISMISSLIQPTSGDVLI 60
Query: 63 LGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLKLV 122
G I K + LG +P+ +Y +LTA NL FF Y + +E + R+E L+LV
Sbjct: 61 KGGSIHKRSKAIRSILGVVPQEIAVYHDLTARENLAFFGKIYGLKGEELKHRMESTLQLV 120
Query: 123 GLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQG-ARLVKDIILEQK 181
GL + + +V +FS GMK+RL +A AL+++PEL+I+DEPT G+DPQ + +++ + +
Sbjct: 121 GLEERQNDRVHTFSGGMKRRLNIAVALLHEPELIIMDEPTVGIDPQSRSHILETVKTLNQ 180
Query: 182 KQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYEIKVETKQPF 241
++ TV ++SH + EVE L D++ I+ +G++ GT +E+K + ++ E P
Sbjct: 181 EREMTVIYTSHYMEEVEYLCDRLYIMDRGEVIASGTKDEVKGILSSNQSIKLTTEMYSPR 240
Query: 242 PEIELPD--VIRIEKIADN--KVLIFAKSDIREILSEELSKRGITVLSLEIEEPSLEDVF 297
L D VI K+ + +++ + +I + L + G T+ S++I+ P+LEDVF
Sbjct: 241 FLTALQDHPVISSVKVMEQTFTIIVPKRENILDDLFMLAKETGTTLKSIDIQAPTLEDVF 300
Query: 298 LKTIYRR 304
L R+
Sbjct: 301 LHLTGRK 307
>pir||T44443 gliding motility protein [imported] - Flavobacterium johnsoniae
>gi|2281663|gb|AAC19751.1| (AF007381) gliding motility
protein [Flavobacterium johnsoniae]
Length = 298
Score = 183 bits (460), Expect = 2e-45
Identities = 107/306 (34%), Positives = 180/306 (57%), Gaps = 27/306 (8%)
Query: 4 IEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSVRLL 63
IE+ +++KSYG+ KA++ +S ++EKG I GFLGPNGAGK+T + + ++ DSGS +
Sbjct: 3 IEVNSISKSYGEQKALNEISFKIEKGEIVGFLGPNGAGKSTLMKILTTYLLADSGSALVN 62
Query: 64 GYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLKLVG 123
G+D+ ++ +G+LPE+ +Y +L L F A Y +PK RIEE+++L G
Sbjct: 63 GHDVMTNAKAVQQSIGYLPEHNPLYLDLYVREYLAFNADVYKVPK----SRIEEVIQLTG 118
Query: 124 LWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQKKQ 183
L ++K+ SKG +QR+ LA AL+++P++LILDEPT+GLDP ++++I K
Sbjct: 119 LTPESHKKISQLSKGYRQRVGLANALLHNPDVLILDEPTTGLDPNQLMEIRNVIKNIGKD 178
Query: 184 GKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEI----KKQYMELEGYEIKVETKQ 239
KT+F S+HI+ EVE + D+V II KG++ L+ + K+Q +E+E ++ ++E +
Sbjct: 179 -KTIFLSTHIMQEVEAICDRVIIIDKGQIVADNKLDHLVAADKEQVIEVE-FDYQIEEQL 236
Query: 240 PFPEIELPDVIRIEKIADNK--------VLIFAKSDIREILSEELSKRGITVLSLEIEEP 291
+ ++E IA K + D+R + + ++ G+ L L +
Sbjct: 237 ---------LAKLENIASYKNTHDMTWELTFITDKDMRPAIFDFANENGLKTLQLNQKNK 287
Query: 292 SLEDVF 297
+LE VF
Sbjct: 288 NLEAVF 293
>dbj|BAB04167.1| (AP001508) ABC transporter (ATP-binding protein) [Bacillus
halodurans]
Length = 307
Score = 182 bits (458), Expect = 4e-45
Identities = 107/305 (35%), Positives = 176/305 (57%), Gaps = 12/305 (3%)
Query: 3 VIEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSVRL 62
+IE + L K Y VD++ L V +G +FGFLGPNG+GKTT + +LG++ D G +++
Sbjct: 2 IIEAKGLKKIYNHVPVVDDVDLLVPEGEVFGFLGPNGSGKTTVMRMLLGLVKTDGGDIKI 61
Query: 63 LGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLKLV 122
LG + K + + +G L E Y L A NL A+ I E +IE+ L V
Sbjct: 62 LGKSLEKNRLSILKEVGALIETPAYYGHLNAIDNLKIAATLRQI---EDHSQIEKTLDRV 118
Query: 123 GLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILE-QK 181
GL +++KVKSFS GMKQRL +A AL++ P+LL+LDEPT+GLDP+G + ++++I + K
Sbjct: 119 GLTSSKHKKVKSFSLGMKQRLGIAMALLHQPKLLLLDEPTNGLDPEGIQEMRELIRDLPK 178
Query: 182 KQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYEIKVET--KQ 239
K+G TVF SSH+L E++++A +VG+I G L G ++ + G + V T K
Sbjct: 179 KEGVTVFVSSHLLGEIDQVASQVGVIYHGSLLYQGQKNDLLASH---GGTTVSVHTPEKD 235
Query: 240 PFPEIELPDVIRIEKI---ADNKVLIFAKSDIREILSEELSKRGITVLSLEIEEPSLEDV 296
++ + + ++K +++++I +E++ L + GI ++ +LED
Sbjct: 236 KVEQLLVMEGFHVQKSIRHKEDEIMITGPHVTKEVIVMLLQREGIQNYYVQEHHRTLEDA 295
Query: 297 FLKTI 301
++ I
Sbjct: 296 YMALI 300
>emb|CAC11370.1| (AL445063) gliding motility protein related [Thermoplasma
acidophilum]
Length = 305
Score = 182 bits (458), Expect = 4e-45
Identities = 104/306 (33%), Positives = 184/306 (59%), Gaps = 11/306 (3%)
Query: 2 KVIEIENLTKSY-GKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSV 60
KVIE+E+L ++Y G+ VD++S V KG I+G LG NGAGKTTTI +M I+ G V
Sbjct: 4 KVIEVEHLRQTYDGRTFVVDDVSFYVLKGEIYGLLGKNGAGKTTTIRTMTTILPVHYGKV 63
Query: 61 RLLGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLK 120
R+LG D+ + K + R+G + +N + ++ + RNL + +++P++ + RIEE+L+
Sbjct: 64 RILGMDVSENAEKIRRRIGVVLQNES-FDFASVERNLKVYGMLWDVPREVLKARIEEVLE 122
Query: 121 LVGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQ 180
+ L +R + S G K+RL +A+ ++D +LL LDEPT GLDP R V + I ++
Sbjct: 123 VFDLGQLRKVRAMELSGGQKKRLQVAREFLHDMDLLFLDEPTVGLDPIMRRSVLNYIRDK 182
Query: 181 KKQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYEIKVETKQP 240
++G TV +++ I+ E + L D++ I+ +GK+ GT ++K +Y +L+ + V +
Sbjct: 183 ARKGLTVLYTTQIMEEADYLCDRIAIMNRGKIVAEGTSSDLKSKYGDLKTIHVVVSGEID 242
Query: 241 FPEI--ELPDVIRIEKIADNKVLIFAKSDIREILSE---ELSKRGITVLSLEIEEPSLED 295
+ ++ + P+ + + DN+ + ++ +IL + L +GI + + +EE SL+D
Sbjct: 243 YEDLRAKFPE----DVLFDNEEIRIVSKNVEDILPDLIIYLKTKGIRIERISVEESSLDD 298
Query: 296 VFLKTI 301
VFLK +
Sbjct: 299 VFLKVV 304
>pir||A75184 ATP-binding transport protein PAB0434 - Pyrococcus abyssi (strain
Orsay) >gi|5458062|emb|CAB49552.1| (AJ248284)
ATP-BINDING TRANSPORT PROTEIN [Pyrococcus abyssi]
Length = 244
Score = 182 bits (457), Expect = 5e-45
Identities = 94/222 (42%), Positives = 141/222 (63%)
Query: 4 IEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSVRLL 63
+ + NL K YGK KA+ +S ++E+G IFG +GPNGAGK+TT+ + ++ P G +
Sbjct: 7 VAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEVF 66
Query: 64 GYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLKLVG 123
G+D+ KE + ++ + +LPE A Y+ LT L+F A Y ++ EK ++ ++L G
Sbjct: 67 GHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIELSG 126
Query: 124 LWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQKKQ 183
L + KV ++SKGM +RLLLA+AL+ P+L ILDEPTSGLD A ++ I E K+
Sbjct: 127 LGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFSKE 186
Query: 184 GKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQY 225
G T SSH + EVE L D+V +I KG++ VGT E+K++Y
Sbjct: 187 GVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERY 228
>gb|AAG19180.1| (AE005015) ABC transporter, ATP-binding protein; Trp5
[Halobacterium sp. NRC-1]
Length = 287
Score = 182 bits (457), Expect = 5e-45
Identities = 106/304 (34%), Positives = 169/304 (54%), Gaps = 30/304 (9%)
Query: 3 VIEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSVRL 62
+I ++ L K YG AVD +S +V G +FG +GPNGAGKT+T+ + G++ P +G + +
Sbjct: 1 MISVQRLEKRYGGVTAVDGVSFDVGAGEVFGLVGPNGAGKTSTLKMLCGLVEPSAGDITV 60
Query: 63 LGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLKLV 122
G+D ++ LGFLPE + +Y+E+T L FFA Y++ + +RIE L +
Sbjct: 61 NGFDAGDTAMR--RTLGFLPEESPLYDEMTPRSYLRFFADLYDVDRATANERIEAALDRL 118
Query: 123 GLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQKK 182
L D R R V FSKGM +++ +A++L+NDP++L+ DEP SGLDP V + E
Sbjct: 119 DL-DARDRPVGDFSKGMTRKVAIARSLVNDPDVLVYDEPASGLDPLTTNTVIEFTRELAA 177
Query: 183 QGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYEIKVETKQPFP 242
GKT+ FS+H L VE + D+V I+ G+ GTL +I+ ++ E+ Y + F
Sbjct: 178 DGKTIVFSAHDLHHVESVCDRVAIMRDGQFAATGTLADIRDEHGEV-SYRV-------FT 229
Query: 243 EIELPD--------VIRIEKIADNKVLIFAKSDIREILSEELSKRGITVLSLEIEEPSLE 294
++++ D V ++ +AD + A +D G V+ + +E +LE
Sbjct: 230 DVDVDDARPSNGRYVTTVDSMADVDAIRAAAAD-----------AGGGVVDIRTDESTLE 278
Query: 295 DVFL 298
DVFL
Sbjct: 279 DVFL 282
>pir||B72334 ABC transporter, ATP-binding protein - Thermotoga maritima (strain
MSB8) >gi|4981322|gb|AAD35875.1|AE001747_18 (AE001747)
ABC transporter, ATP-binding protein [Thermotoga
maritima]
Length = 260
Score = 181 bits (454), Expect = 1e-44
Identities = 89/223 (39%), Positives = 139/223 (61%), Gaps = 1/223 (0%)
Query: 1 MKVIEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSV 60
+ +I LT+ +G F AVD++ L V G I+GFLGPNGAGKTTTI + G++ P G V
Sbjct: 9 ISLIVARGLTRKFGDFTAVDHIDLSVRPGEIYGFLGPNGAGKTTTIKMLTGVLKPTEGEV 68
Query: 61 RLLGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLK 120
+LG + I+ K+ +G +P+ IY LT LDF Y++ ++E +KRI EL +
Sbjct: 69 EILGMKMSTHEIEIKKSIGVIPDEPKIYSHLTGKEFLDFIIEIYDLKEEEIDKRIAELCE 128
Query: 121 LVGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQ 180
+ D ++V S GMKQ+L+L + P+++ LDEPT GLD + AR++K ++ +
Sbjct: 129 AFKV-DYLGKRVGEMSHGMKQKLMLVSVFMRKPKVIFLDEPTVGLDAKSARILKLLLRKY 187
Query: 181 KKQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKK 223
+G +F ++HIL E++ D++GII KG+L GT+EE++K
Sbjct: 188 ADEGAAIFLTTHILEIAEKMCDRIGIINKGRLIAEGTMEELRK 230
>gb|AAG20087.1| (AE005088) ABC transport protein; Trp2 [Halobacterium sp. NRC-1]
Length = 249
Score = 181 bits (454), Expect = 1e-44
Identities = 92/223 (41%), Positives = 139/223 (62%), Gaps = 1/223 (0%)
Query: 2 KVIEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSVR 61
+ IE LTK YG A++ + L V G ++GFLGPNGAGKTTT+ + ++ P SG+
Sbjct: 4 RAIEARALTKRYGDTTAIERIDLAVPSGSVYGFLGPNGAGKTTTMRMLTTLVEPTSGTAT 63
Query: 62 LLGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLKL 121
+ G ++ + +G+LPE ++ ELTA L + A +IP E+RI +LL+
Sbjct: 64 VAGVEV-TDRASVVPNIGYLPEEPPLHAELTAREQLRYIAGLRDIPDPRAEQRITDLLER 122
Query: 122 VGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQK 181
L D R++ ++SKGMKQ+ + QA+++DP++L LDEPTSGLDP+ AR V+D I +
Sbjct: 123 FSLGDDADRRISTYSKGMKQKTGIIQAMLHDPDVLFLDEPTSGLDPRAARTVRDTIADLT 182
Query: 182 KQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQ 224
TVF S+HIL V++LAD VG++ G L T G + +K++
Sbjct: 183 AGDATVFLSTHILPVVDDLADTVGVLYDGSLVTEGPPDALKQR 225
>pir||C72568 probable ATP-binding transport protein APE1829 - Aeropyrum pernix
(strain K1) >gi|5105519|dbj|BAA80832.1| (AP000062) 345aa
long hypothetical ATP-binding transport protein
[Aeropyrum pernix]
Length = 345
Score = 180 bits (451), Expect = 2e-44
Identities = 110/300 (36%), Positives = 172/300 (56%), Gaps = 18/300 (6%)
Query: 17 KAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSVRLLGYDIFKEPIKAKE 76
+A+ +S V +G I+ FLGPNGAGKTTT+ + ++ PD G R+ G+D+ KE + ++
Sbjct: 26 EALKGVSFSVYEGEIYSFLGPNGAGKTTTVRILSTLLDPDGGEARVAGFDVVKERWEVRK 85
Query: 77 RLG-FLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLKLVGLWDV--RYRKVK 133
R+G L Y +LT NL +F Y IP+ E + RI+E+L LVGL D+ + +
Sbjct: 86 RIGVMLSVERGFYWKLTGRENLYYFGRIYGIPQGELKSRIKEVLDLVGLTDLGGADKPFE 145
Query: 134 SFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQKKQGKTVFFSSHI 193
S GMK RL LA+ L+ DPE+LILDEPT GLDP AR ++ +I +G+T+F ++H
Sbjct: 146 EMSLGMKARLGLARVLLKDPEVLILDEPTLGLDPASARTIRGVIRSLASEGRTIFITTHN 205
Query: 194 LSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYEIKVE-----TKQPFPEI--EL 246
+ E E ++D+VGII+ G++ GT +E+K++ E +V+ K+ F ++ E
Sbjct: 206 MVEAEMISDRVGIIIGGRIAMEGTPDELKRRVFSSINLEFRVKASGHAAKKFFYDVKGEY 265
Query: 247 PDVIRIEKIADNKVLIFAKSDIREILSEELSKR--------GITVLSLEIEEPSLEDVFL 298
+ I + +L F S R+ +E + R +L ++ EPSLEDVF+
Sbjct: 266 GNRIVGGVTFSDGILTFRVSVNRDEPAEPIIDRITRLAYQYRFKILEIKALEPSLEDVFV 325
>pir||A70082 ABC transporter (ATP-binding protein) homolog yxlF - Bacillus
subtilis >gi|1783260|dbj|BAA11737.1| (D83026) homologous
to many ATP-binding transport proteins; hypothetical
[Bacillus subtilis] >gi|2636401|emb|CAB15892.1| (Z99123)
similar to ABC transporter (ATP-binding protein)
[Bacillus subtilis]
Length = 295
Score = 179 bits (449), Expect = 4e-44
Identities = 112/303 (36%), Positives = 177/303 (57%), Gaps = 12/303 (3%)
Query: 3 VIEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSVRL 62
++ IE+L KSY +AV N+S V + LGPNGAGKTTT+ + G++ P SG+++L
Sbjct: 1 MLSIESLCKSYRHHEAVKNVSFHVNENECVALLGPNGAGKTTTLQMLAGLLSPTSGTIKL 60
Query: 63 LGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLKLV 122
LG E + +G+LP+ Y +TA L F + K++ +++I E+L+ V
Sbjct: 61 LG-----EKKLDRRLIGYLPQYPAFYSWMTANEFLTFAGRLSGLSKRKCQEKIGEMLEFV 115
Query: 123 GLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQKK 182
GL + ++++ +S GMKQRL LAQAL++ P+ LILDEP S LDP G V D++ E KK
Sbjct: 116 GLHEAAHKRIGGYSGGMKQRLGLAQALLHKPKFLILDEPVSALDPTGRFEVLDMMRELKK 175
Query: 183 QGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYEIKVETKQPFP 242
V FS+H+L + E++ D+V I+ G++ G L+E+K+Q + + + V+ K
Sbjct: 176 H-MAVLFSTHVLHDAEQVCDQVVIMKNGEISWKGELQELKQQ-QQTNVFTLSVKEKLEGW 233
Query: 243 EIELPDVIRIEKIADNKVLIFAKSDI---REILSEELSKRGITVLSLEIEEPSLEDVFLK 299
E P V I + +F DI R +LS+ + ++G+TV E + SLEDV+LK
Sbjct: 234 LEEKPYVSAI-VYKNPSQAVFELPDIHAGRSLLSDCI-RKGLTVTRFEQKTESLEDVYLK 291
Query: 300 TIY 302
++
Sbjct: 292 VVH 294
>gb|AAG20956.1| (AE005162) daunorubicin resistance ABC transporter ATP-binding
protein; Trp6 [Halobacterium sp. NRC-1]
Length = 263
Score = 178 bits (448), Expect = 5e-44
Identities = 105/258 (40%), Positives = 149/258 (57%), Gaps = 6/258 (2%)
Query: 4 IEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSVRLL 63
I ++LTK YG AV +L +E G ++GFLGPNGAGKTTTI + + P SG+ +
Sbjct: 7 ITTDDLTKEYGDTTAVSGFTLAIEAGHVYGFLGPNGAGKTTTIRMLTALTEPTSGAGHVA 66
Query: 64 GYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLKLVG 123
G+ I +G+LPE IY+ELTA L++ ++ E E RIEELL
Sbjct: 67 GHPITNRQAIIPH-IGYLPELPPIYDELTAREQLEYHGGLRDMDPVEIEDRIEELLDRFD 125
Query: 124 LWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQKKQ 183
L ++ ++SKGMKQ+ L QAL+++P+++ILDEPTSGLDP+ AR V+D I E
Sbjct: 126 LTGDADDRISTYSKGMKQKTGLVQALMHEPDVVILDEPTSGLDPRAARTVRDTITELAAG 185
Query: 184 GKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQY-----MELEGYEIKVETK 238
+TVF S+HIL V ELA +VGI+ G+L G EE+K + LE ++V T
Sbjct: 186 DRTVFLSTHILPVVAELATEVGILYDGELVAEGAPEELKDRMEAGGESTLEDVFLEVTTD 245
Query: 239 QPFPEIELPDVIRIEKIA 256
+ + E P + + A
Sbjct: 246 EAYEADESPSDTGVSRSA 263
>dbj|BAB05817.1| (AP001514) ABC transporter (ATP-binding protein) (daunorubicin
resistance) [Bacillus halodurans]
Length = 310
Score = 178 bits (448), Expect = 5e-44
Identities = 104/302 (34%), Positives = 182/302 (59%), Gaps = 7/302 (2%)
Query: 3 VIEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSVRL 62
++E NL K++ AV +++ + G G LGPNGAGK+TTI + +I P SG ++L
Sbjct: 1 MLETINLCKTFKGQPAVQEVNMYLNSGESVGLLGPNGAGKSTTISMISTLIKPTSGEIKL 60
Query: 63 LGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLKLV 122
G +I P ++ LG +P+ +Y+EL+A+ NL FF S Y + + E RI+ L++V
Sbjct: 61 NGINIISHPGDIRKILGVVPQELALYQELSAYENLKFFGSTYKMKGKHLENRIQHALEIV 120
Query: 123 GLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGA-RLVKDIILEQK 181
GL D + VK+FS GMK+R+ +A AL+++P++LILDEPT G+DPQ +++ + +
Sbjct: 121 GLKDRQKDLVKTFSGGMKRRINIAAALLHEPKILILDEPTVGIDPQSRNHILETVRTLNE 180
Query: 182 KQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYEIKV-ETKQP 240
+G TV ++SH + EVE+L D++ I+ G++ GT EE+ + ++++ + +
Sbjct: 181 NEGTTVLYTSHYMEEVEQLCDRLYIMDHGEIIAAGTKEELLSILSTEDTIKVELSKIDET 240
Query: 241 FPE-IELPDVIRIEKIADNKVLIFAKSD---IREILSEELSKRGITVLSLEIEEPSLEDV 296
F + +++ + +R + + +++ + AK IRE++ + I ++ E PSLEDV
Sbjct: 241 FVQNVKMIEGVRKVEASHSQLKMIAKKGSHLIRELV-HLTDQHQIQMIHFHTETPSLEDV 299
Query: 297 FL 298
FL
Sbjct: 300 FL 301
>pir||S76626 ABC-type transport protein sll0489 - Synechocystis sp. (strain PCC
6803) >gi|1001733|dbj|BAA10570.1| (D64004) ABC
transporter [Synechocystis sp.]
Length = 342
Score = 178 bits (447), Expect = 7e-44
Identities = 100/311 (32%), Positives = 177/311 (56%), Gaps = 13/311 (4%)
Query: 3 VIEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSVRL 62
+IE+E+L+K YG A+ N+ V+KG I GFLGPNGAGKTTT+ + G I +G+VR+
Sbjct: 1 MIEVEHLSKVYGSTTAIQNVDFSVQKGEILGFLGPNGAGKTTTMRILAGYIPATTGTVRV 60
Query: 63 LGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLKLV 122
G+D+ ++ + ++R+G+LPEN +Y ++T L+F AS + ++ +R+ ++
Sbjct: 61 AGFDVHEQSLAVRKRIGYLPENPPLYGDMTVASFLNFVASIKGVKPGDRRQRVIWAMERC 120
Query: 123 GLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQKK 182
L + R ++ SKG KQR+ +AQA+++DP ++ILDEPT GLDP+ V+++I +
Sbjct: 121 QLTEKRKVLIRKLSKGFKQRVGIAQAIVHDPAVIILDEPTVGLDPKQIIEVRNLI-KSLA 179
Query: 183 QGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYEIKV------- 235
+ T+ S+HIL EV D+V II +G++ T + + + Y+++V
Sbjct: 180 EDHTIILSTHILPEVSMTCDRVTIINQGRVVATNTPDNLLAELKGNLSYQLEVAGAEGMA 239
Query: 236 --ETKQPFPEIELPDVIRIEKIADNKVLIFAKSDIREI---LSEELSKRGITVLSLEIEE 290
Q P +E + + + ++ + + E+ L++ + +G + ++
Sbjct: 240 IAHCLQSLPGVEEVQTKTHPQQQERQQILVRSNQLEELGQQLAQAIVTQGWDLYEMQRLR 299
Query: 291 PSLEDVFLKTI 301
P+LEDVFL I
Sbjct: 300 PTLEDVFLNLI 310
>pir||E69771 ABC transporter (ATP-binding protein) homolog ydbJ - Bacillus
subtilis >gi|1881259|dbj|BAA19286.1| (AB001488) PROBABLE
TRANSPORT ATP BINDING PROTEIN. [Bacillus subtilis]
>gi|2632749|emb|CAB12256.1| (Z99106) similar to ABC
transporter (ATP-binding protein) [Bacillus subtilis]
Length = 308
Score = 178 bits (446), Expect = 9e-44
Identities = 112/298 (37%), Positives = 177/298 (58%), Gaps = 8/298 (2%)
Query: 3 VIEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSVRL 62
++ IE L K G + + +S++V +G I G LGPNG+GKTT I ++G++ +SGSV +
Sbjct: 5 ILHIEGLDKKIGSKQILKQISMDVMEGEIIGLLGPNGSGKTTLIRIIVGLLKQNSGSVTI 64
Query: 63 LGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLKLV 122
G+ E KA E +G + EN Y LT W NL FA N+ K+ ++R++E+++ V
Sbjct: 65 SGFQHDTEFEKAMEAVGAIVENPEFYPYLTGWENLKHFA---NMHKKIADERLDEVVERV 121
Query: 123 GLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILE-QK 181
GL + KVK++S GM+QRL +AQA+++ P+LLILDEPT+GLDP G + +D I E +
Sbjct: 122 GLTSAIHDKVKTYSLGMRQRLGIAQAILHRPKLLILDEPTNGLDPAGMKDFRDHIKELAE 181
Query: 182 KQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYEIKVETKQPF 241
+G V F++H+L EVE+L D+V II KG+++ +L+ + E I+V+ ++
Sbjct: 182 MEGTAVLFATHLLREVEDLCDRVIIIQKGEIKAEVSLQGTDQ---TTEKAIIEVQPQEKA 238
Query: 242 PEIELPDVIRIEKIADNKVLIFAKSDIREILSEELSKRGITVLSLEIEEPSLEDVFLK 299
+ + E V+ AK +I E L+ L + + V S+ SLED F+K
Sbjct: 239 LNWLTGNQYQAESQDGTIVVEVAKENIPE-LNRSLVGQDLNVFSITPYTQSLEDEFIK 295
>dbj|BAB07612.1| (AP001520) ABC transporter (ATP-binding protein) [Bacillus
halodurans]
Length = 282
Score = 177 bits (445), Expect = 1e-43
Identities = 104/307 (33%), Positives = 168/307 (53%), Gaps = 45/307 (14%)
Query: 3 VIEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSVRL 62
VIE+++L K++ +A+ ++S +++G FGFLGP+GAGKTTTI + G + G V L
Sbjct: 4 VIEVKHLRKTFDGKEALKDVSFSIKRGETFGFLGPSGAGKTTTIKILTGQVRSFDGEVAL 63
Query: 63 LGYDIFKEPIKA-KERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLKL 121
G + + K ++G L +N+ +YE LT NL + Y++P E+RI ++L
Sbjct: 64 FGKPVHRLKRKTFMSQIGVLTDNSGLYERLTVQDNLSMYCKLYSVP----ERRIHDVLAE 119
Query: 122 VGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQK 181
VGL D R + V SKGMKQR++LA+A+++ P+LL LDEPTS LDP + ++ D +
Sbjct: 120 VGLRDERAKIVSKLSKGMKQRVILARAMLHKPDLLFLDEPTSALDPASSHMIHDSLRRLN 179
Query: 182 KQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYEIKVETKQPF 241
++G T+F ++H + E E++ D+V + +GK+R + T E+++ Y
Sbjct: 180 REGTTIFLTTHDMLEAEKICDRVAFLDQGKIRVMDTPEQLRLTY---------------- 223
Query: 242 PEIELPDVIRIEKIADNKVLIFAKSDIREILSEELS---------KRGITVLSLEIEEPS 292
AD+ + + K REI+ L K G +LS+ EP+
Sbjct: 224 --------------ADSTITLLLKGGRREIVENNLDGANTISQVMKNG-ELLSIHSNEPT 268
Query: 293 LEDVFLK 299
L DVFL+
Sbjct: 269 LGDVFLR 275
>pir||H71066 probable ATP-binding transport protein - Pyrococcus horikoshii
>gi|3257647|dbj|BAA30330.1| (AP000005) 253aa long
hypothetical ATP-binding transport protein [Pyrococcus
horikoshii]
Length = 253
Score = 177 bits (445), Expect = 1e-43
Identities = 86/242 (35%), Positives = 151/242 (61%)
Query: 3 VIEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSVRL 62
+I +ENL K +G + + ++ V G I+G LGPNG+GK+TT+ + GII G V +
Sbjct: 1 MIIVENLRKKFGSKEVLKGINFTVNDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVMV 60
Query: 63 LGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLKLV 122
G D+ ++P+K KE +G++PE +YE LT F IP+ E+R++ L+
Sbjct: 61 AGVDVSRDPMKVKEIVGYVPETPALYESLTPAEFFSFIGGVRRIPQDILEERVKRLVDAF 120
Query: 123 GLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQKK 182
G+ + + + S G KQ++ L AL++DP++LILDE +GLDP+ AR+ ++++ E K+
Sbjct: 121 GIGKYMNQLIGTLSFGTKQKISLISALLHDPQVLILDEAMNGLDPKSARIFRELLFEFKE 180
Query: 183 QGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYEIKVETKQPFP 242
+GK++ FS+HIL+ E + D++GII +G++ GT++E+++ E + +I ++ Q
Sbjct: 181 EGKSIVFSTHILALAEVMCDRIGIIYEGRIVAEGTIDELREIAREEKLEDIFLKLTQAKE 240
Query: 243 EI 244
E+
Sbjct: 241 EV 242
>pir||C69012 ABC transporter (ATP-binding, daunorubicin resistance) -
Methanobacterium thermoautotrophicum (strain Delta H)
>gi|2622194|gb|AAB85582.1| (AE000880) ABC transporter
(ATP-binding [Methanobacterium thermoautotrophicum]
Length = 312
Score = 177 bits (445), Expect = 1e-43
Identities = 101/301 (33%), Positives = 178/301 (58%), Gaps = 5/301 (1%)
Query: 3 VIEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSVRL 62
+IE E++ K Y +F AV ++L V +G I+G LGPNGAGKTT I + I+ P G +
Sbjct: 4 IIETEDIKKKYDEFLAVKGVNLRVPEGSIYGVLGPNGAGKTTLISMLCTILRPTGGRGTV 63
Query: 63 LGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLKLV 122
GYDI ++ K +E +G + ++ + + LT +L+ A+ Y +P+ +++RIEE+L+L+
Sbjct: 64 NGYDIVRDARKVRESIGIVFQSRALDDILTGREHLEMHAALYGVPRDVRDRRIEEVLELI 123
Query: 123 GLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILE-QK 181
L D VK++S GMK+RL + + LI+ P +L LDEPT GLDPQ + I + +
Sbjct: 124 ALGDKADEYVKTYSGGMKRRLEIGRGLIHHPRVLFLDEPTLGLDPQTRESIWRYIEKLNR 183
Query: 182 KQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYEIKVETKQPF 241
++ TV ++H + E ++L D+V I+ G++ + +K++ + + ++V+ + F
Sbjct: 184 EEDVTVLLTTHYMEEADKLCDEVAIMSHGEIIKADSPGNLKRE-LGADTITVRVDRARGF 242
Query: 242 PEI-ELPDVIRIEKIADN--KVLIFAKSDIREILSEELSKRGITVLSLEIEEPSLEDVFL 298
EI E D ++ + D+ KVL+ ++ + ++ V ++E+E P+LEDVF+
Sbjct: 243 HEILEKQDYVKEAYLMDDEVKVLVERGENLVPEIVNLAARNNYYVRAVELEHPTLEDVFI 302
Query: 299 K 299
K
Sbjct: 303 K 303
>dbj|BAB04537.1| (AP001509) bacitracin ABC transporter (ATP-binding protein)
[Bacillus halodurans]
Length = 314
Score = 177 bits (444), Expect = 2e-43
Identities = 111/305 (36%), Positives = 170/305 (55%), Gaps = 12/305 (3%)
Query: 2 KVIEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSVR 61
KVI NLTK++ + + NL+L V KG I+GFLGPNGAGKTT + ++ + P +G +
Sbjct: 3 KVITTRNLTKTFQGKEIISNLNLHVNKGEIYGFLGPNGAGKTTVMKMLMNFVKPSAGEIE 62
Query: 62 LLGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLKL 121
L G + + + +R+G + E YE+L+A NL+ + K IEE L++
Sbjct: 63 LFGQRLTSQSYEMLKRIGSMIEFPIFYEKLSARENLELHCEYMG---YYKPSAIEEALEM 119
Query: 122 VGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQ- 180
V L + VK FS GMKQRL +A+A+ PELLILDEP +GLDP G + ++ +
Sbjct: 120 VKLQLTGSKAVKDFSLGMKQRLGIARAICTKPELLILDEPINGLDPVGIKEIRQLFQTLC 179
Query: 181 KKQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQ---YMELEGYEIKVET 237
+ G T+ SSHILSE+E++AD VG+I G L L++I+ Q Y+EL Y+ +
Sbjct: 180 NEYGVTILISSHILSEIEQIADTVGVIRNGMLVAEVALDDIRSQQTEYIELLTYDARKAL 239
Query: 238 KQPFPEIELPDVIRIEKIADNKVL-IFAKSDIREILSEELSKRGITVLSLEIEEPSLEDV 296
E+ L +V K+ D ++ I+ + LS+ L + + ++ + SLED
Sbjct: 240 YVLDNELGLKNV----KLMDQSLIRIYDHHLTQNQLSKTLISNDVNIEAIARKNHSLEDY 295
Query: 297 FLKTI 301
F+ I
Sbjct: 296 FMNLI 300
>pir||T50566 probable ABC-type transport protein, ATP-binding component
[imported] - Streptomyces coelicolor
>gi|6469242|emb|CAB61703.1| (AL133220) probable ABC
transporter, ATP-binding component. [Streptomyces
coelicolor A3(2)]
Length = 365
Score = 176 bits (441), Expect = 3e-43
Identities = 100/306 (32%), Positives = 169/306 (54%), Gaps = 14/306 (4%)
Query: 4 IEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSVRLL 63
+ + L K YG+ KA+D + L+V +G + G LGPNGAGKTT + + +I PDSG +
Sbjct: 37 VTVRGLVKHYGETKALDGVDLDVREGTVMGVLGPNGAGKTTLVRILSTLITPDSGQAHVA 96
Query: 64 GYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLKLVG 123
GYD+ ++P + + +G + A++ E+L W NL ++ +++ R +ELL+
Sbjct: 97 GYDVVRQPRQLRRVIGLTGQYASVDEKLPGWENLYMIGRLLDLSRRDARTRADELLERFS 156
Query: 124 LWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQKKQ 183
L + R ++S GM++RL LA ++I P +L LDEPT+GLDP+ V D +
Sbjct: 157 LTEAGKRPASTYSGGMRRRLDLAASMIGHPAVLFLDEPTTGLDPRTRNEVWDEVKRMVGD 216
Query: 184 GKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYEIKVETKQPF-- 241
G TV ++ + E E+LA ++ ++ +GK+ G +EE+K ++ G +++ P
Sbjct: 217 GVTVLLTTQYMEEAEQLASELTVVDRGKVIANGGIEELK---AKVGGRTLRIRPADPLQL 273
Query: 242 -PEIELPDVIRIEKIADNKVLIFAKSDIREILSEE--------LSKRGITVLSLEIEEPS 292
P D + I +A + V + + ILS+E ++ RGITV ++ E PS
Sbjct: 274 RPLAAYLDELGITGLASSTVDTERGTVLVPILSDEQLTAVVGAVTARGITVSAVTTELPS 333
Query: 293 LEDVFL 298
L++VFL
Sbjct: 334 LDEVFL 339
>emb|CAB95908.1| (AL359988) putative ABC transport system ATP-binding protein
[Streptomyces coelicolor A3(2)]
Length = 263
Score = 175 bits (440), Expect = 5e-43
Identities = 80/219 (36%), Positives = 138/219 (62%)
Query: 4 IEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSVRLL 63
+ ++ L K +G+ AV + LE+ G G +GPNGAGKTTT+ + G++ PD G+V ++
Sbjct: 12 VRVQGLWKRFGQQVAVGGVDLELPAGKFIGLVGPNGAGKTTTLSMVTGLLRPDQGTVEVV 71
Query: 64 GYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLKLVG 123
G+D++++P++ K R+G LPE ++E L+ L + +P E +KR +LL ++
Sbjct: 72 GHDVWRDPVEVKARIGVLPEGLRLFERLSGRELLGYTGRLRGLPGDEVDKRATQLLDVLD 131
Query: 124 LWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQKKQ 183
L +++ V +S GM++++ LA AL+++PE+L LDEP G+DP A+ ++ ++
Sbjct: 132 LAGAQHKLVVDYSTGMRKKIGLAAALLHNPEVLFLDEPFEGVDPVSAQTIRGVLERYTAS 191
Query: 184 GKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIK 222
G TV FSSH++ VE L D V ++ G++R GTL E++
Sbjct: 192 GATVVFSSHVMELVESLCDWVAVMAAGRIRATGTLAEVR 230
>pir||JC5348 cdd4 protein - Clostridium difficile >gi|1770140|emb|CAA63569.1|
(X92982) cdd4 [Clostridium difficile]
Length = 301
Score = 175 bits (439), Expect = 6e-43
Identities = 107/307 (34%), Positives = 174/307 (55%), Gaps = 14/307 (4%)
Query: 3 VIEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSVRL 62
+I + L+K Y K V ++ L V +G ++GFLGPNGAGK+TT+ +LG+ P G++ +
Sbjct: 4 IIRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINI 63
Query: 63 LGYDIF-KEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLKL 121
LG ++ K I + +G L E+ + Y LT N+ ++PK K + E LK+
Sbjct: 64 LGKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLPK----KNVNEALKI 119
Query: 122 VGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILE-Q 180
V L + + +KV +S GMKQRL +A A++ P+LLILDEPT+GLDP G ++++I
Sbjct: 120 VRLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLP 179
Query: 181 KKQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYEIKVETKQP 240
+K G TV SSH+LSE++++A +GII G+L +++E+ + +I ++TK
Sbjct: 180 EKYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNRGQS----QIAIKTKNV 235
Query: 241 FPEIELPDVIRIEKIADNKVLIFAK---SDIREILSEELSKRGITVLSLEIEEPSLEDVF 297
+L + + + L SD+ +I + L I V +E + SLED+F
Sbjct: 236 VSAQKLLNTKGYMSLIQDGYLTIENLKDSDVAKI-NGMLVHSNIDVFRIEEHKKSLEDIF 294
Query: 298 LKTIYRR 304
L+ + RR
Sbjct: 295 LELLVRR 301
>pir||E72364 ABC transporter, ATP-binding protein - Thermotoga maritima (strain
MSB8) >gi|4981058|gb|AAD35629.1|AE001729_9 (AE001729)
ABC transporter, ATP-binding protein [Thermotoga
maritima]
Length = 244
Score = 175 bits (439), Expect = 6e-43
Identities = 89/225 (39%), Positives = 141/225 (62%)
Query: 1 MKVIEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSV 60
M + +++L K GK + + +S E+E+G IFG +GPNGAGKTTT+ + +I P SG V
Sbjct: 1 MGAVVVKDLRKRIGKKEILKGISFEIEEGEIFGLIGPNGAGKTTTLRIISTLIKPSSGIV 60
Query: 61 RLLGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLK 120
+ G ++ +EP + ++ + +LPE A Y + L F A FY E E+ +E +
Sbjct: 61 TVFGKNVVEEPHEVRKLISYLPEEAGAYRNMQGIEYLRFVAGFYASSSSEIEEMVERATE 120
Query: 121 LVGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQ 180
+ GL + +V ++SKGM ++LL+A+AL+ +P L ILDEPTSGLD AR V+ I+ +
Sbjct: 121 IAGLGEKIKDRVSTYSKGMVRKLLIARALMVNPRLAILDEPTSGLDVLNAREVRKILKQA 180
Query: 181 KKQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQY 225
++G T+ SSH + EVE L D++ +I G + GT+EE+K++Y
Sbjct: 181 SQEGLTILVSSHNMLEVEFLCDRIALIHNGTIVETGTVEELKERY 225
>pir||T36505 probable ABC-type transport system ATP-binding component -
Streptomyces coelicolor >gi|5457259|emb|CAB46947.1|
(AL096822) putative ABC-transporter ATP-binding
component [Streptomyces coelicolor A3(2)]
Length = 342
Score = 175 bits (439), Expect = 6e-43
Identities = 104/306 (33%), Positives = 169/306 (54%), Gaps = 11/306 (3%)
Query: 4 IEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSVRLL 63
IE L K++G+ +AVD + L V G ++G LGPNGAGKTTT+ + ++ PD G R+
Sbjct: 10 IETAGLVKTFGETRAVDGVDLAVPAGTVYGVLGPNGAGKTTTVKMLATLLRPDGGHARVF 69
Query: 64 GYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLKLVG 123
G+D+ E + + R+ + A++ E+LT NL K +R ++LL G
Sbjct: 70 GHDVVHEADEVRGRVSLTGQYASVDEDLTGTENLVLLGRLLGHGKAAARERGDQLLAAFG 129
Query: 124 LWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQKKQ 183
L D ++VK +S GM++R+ +A +++N P+LL LDEPT+GLDP+ V DI+ Q
Sbjct: 130 LTDAAAKQVKHYSGGMRRRIDIAASILNTPDLLFLDEPTTGLDPRSRNQVWDIVRAVVAQ 189
Query: 184 GKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQ------YMELEGYEIKVET 237
G TV ++ L E ++LA ++ +I KG++ GT E+K ++ L E + E
Sbjct: 190 GTTVLLTTQYLDEADQLASRIAVIDKGRVIAEGTKGELKASVGAGSVHLRLRDAEERPEA 249
Query: 238 KQPFPEIELPDV-IRIEKIADNKVLIFAKSDIREILSE----ELSKRGITVLSLEIEEPS 292
++ + + +V + +A L A SD + EL++ GITV S + +PS
Sbjct: 250 ERVLRNLLVAEVQPEPDPVALTARLGAAASDTAADQAAKALGELARAGITVDSFSLGQPS 309
Query: 293 LEDVFL 298
L++VFL
Sbjct: 310 LDEVFL 315
>gb|AAK41395.1| ABC transporter, ATP binding protein [Sulfolobus solfataricus]
Length = 275
Score = 175 bits (438), Expect = 8e-43
Identities = 107/306 (34%), Positives = 169/306 (54%), Gaps = 40/306 (13%)
Query: 1 MKVIEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSV 60
M VIE+ N+ K+YGK A +++++ V++G I LGPNGAGKTT + + G + P G +
Sbjct: 1 MYVIEVNNVWKAYGKIIANEDITMRVKEGEIVALLGPNGAGKTTLVKQIYGELTPTKGEI 60
Query: 61 RLLGYDIFKEPIK--AKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEEL 118
R+LG K+P K+ LG +P+ Y +LT W N+ + K E +KR EEL
Sbjct: 61 RVLG----KKPTDRHVKKFLGVIPQECEPYGDLTVWDNIYYMGRLKGASKDEIKKRGEEL 116
Query: 119 LKLVGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIIL 178
L+ + L R + S G+K+R L+A ALIN+P+LLILDEPT+GLDP+ R V +I+L
Sbjct: 117 LERLDLRSKRNTLARDLSGGLKRRTLIAMALINNPKLLILDEPTTGLDPEARREVWEILL 176
Query: 179 EQKKQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYEIKVETK 238
+K+G+++ ++H L E E LADK+ + + K+ GT +IK
Sbjct: 177 NMRKEGQSMLLTTHYLDEAERLADKIYFLSR-KIIVEGTPTQIK---------------- 219
Query: 239 QPFPEIELPDVIRIEKIAD-NKVLIFAKSDIREILSEELSKRGITVLS--LEIEEPSLED 295
EK AD +V+ + + ++ EE K+ I ++ E+ PSLE+
Sbjct: 220 --------------EKFADWYEVIDYTNGKVYKVKGEEELKKIIMTINGKFEVRMPSLEE 265
Query: 296 VFLKTI 301
++L+ +
Sbjct: 266 IYLQVM 271
>pir||S32908 hypothetical protein 4 - Streptomyces antibioticus
>gi|153382|gb|AAA26793.1| (L06249) ATP-binding protein
[Streptomyces antibioticus]
Length = 325
Score = 174 bits (437), Expect = 1e-42
Identities = 101/304 (33%), Positives = 168/304 (55%), Gaps = 14/304 (4%)
Query: 6 IENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSVRLLGY 65
+ L K YG+ KA+D + L+V +G + G LGPNGAGKTT + + +I PDSG + GY
Sbjct: 3 VRGLVKHYGETKALDGVDLDVREGTVMGVLGPNGAGKTTLVRILSTLITPDSGQATVAGY 62
Query: 66 DIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLKLVGLW 125
D+ ++P + + +G + A++ E+L W NL ++ ++E R +ELL+ L
Sbjct: 63 DVVRQPRQLRRVIGLTGQYASVDEKLPGWENLYLIGRLLDLSRKEARARADELLERFSLT 122
Query: 126 DVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQKKQGK 185
+ R ++S GM++RL LA ++I P +L LDEPT+GLDP+ V D + G
Sbjct: 123 EAARRPAGTYSGGMRRRLDLAASMIGRPAVLYLDEPTTGLDPRTRNEVWDEVKAMVGDGV 182
Query: 186 TVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYEIKVETKQPF---P 242
TV ++ + E E+LA ++ ++ +G++ G +EE+K + + G ++V P P
Sbjct: 183 TVLLTTQYMEEAEQLASELTVVDRGRVIAKGGIEELKAR---VGGRTLRVRPVDPLQLRP 239
Query: 243 EIELPDVIRIEKIADNKVLIFAKSDIREILSEE--------LSKRGITVLSLEIEEPSLE 294
+ D + I +A V + + ILS+E ++ RGIT+ S+ E PSL+
Sbjct: 240 LAGMLDELGITGLASTTVDTETGALLVPILSDEQLTAVVGAVTARGITLSSITTELPSLD 299
Query: 295 DVFL 298
+VFL
Sbjct: 300 EVFL 303
>gb|AAC72253.1| (U91581) LctF [Lactococcus lactis subsp. lactis]
Length = 306
Score = 174 bits (437), Expect = 1e-42
Identities = 113/302 (37%), Positives = 173/302 (56%), Gaps = 13/302 (4%)
Query: 2 KVIEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSVR 61
K++E + L+K +GK +V NL++ V+KG IFGFLGPNGAGK+TT+ +LG++ P G V+
Sbjct: 5 KILETKKLSKKFGKEYSVRNLTISVKKGDIFGFLGPNGAGKSTTMKMILGLLHPTEGEVK 64
Query: 62 LLGYDIFKE-PIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLK 120
+ G + + +G L E + Y L+ NL N+P IE++L
Sbjct: 65 VFGKKLDNSVKNSVLKDVGCLIEEPSFYPNLSGLENLKLVQKLLNLPYH----NIEKVLN 120
Query: 121 LVGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILE- 179
+V L D + + VK++S GMKQRL +A ALI P+LLILDEPT+GLDP G R ++++I
Sbjct: 121 IVKLEDQKNKLVKNYSLGMKQRLGIALALIKFPKLLILDEPTNGLDPTGIREIRELIKSL 180
Query: 180 QKKQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYEIKVETKQ 239
+K G TV SSH+LSE+E++A+ V II KG+L G L ++++Q + +EI+
Sbjct: 181 PEKYGITVLISSHLLSEIEQIANTVAIIKKGELLYEGELSKLEEQPI----FEIQTNLIN 236
Query: 240 PFPEIELPDVIRIEKIADNKVLIFAKSDI--REILSEELSKRGITVLSLEIEEPSLEDVF 297
E+ L + K N + SD+ R E L + I + + +LE VF
Sbjct: 237 QSFEV-LQGLGYTVKKQSNDTIQIMNSDLNKRAAAIEALVSQQIKIYEAKSVTKNLEQVF 295
Query: 298 LK 299
++
Sbjct: 296 IE 297
>pir||E72384 ABC transporter, ATP-binding protein - Thermotoga maritima (strain
MSB8) >gi|4980892|gb|AAD35474.1|AE001718_11 (AE001718)
ABC transporter, ATP-binding protein [Thermotoga
maritima]
Length = 301
Score = 173 bits (435), Expect = 2e-42
Identities = 109/299 (36%), Positives = 165/299 (54%), Gaps = 17/299 (5%)
Query: 1 MKVIEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSV 60
++++++ +L K YG KAVD +S VE+G +F FLGPNGAGKTTT+ + G+ DSG +
Sbjct: 12 LEILKVVDLKKHYGDVKAVDGISFTVERGTVFSFLGPNGAGKTTTVEILEGLRKKDSGEI 71
Query: 61 RLLGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLK 120
G + K ++G + + +E LT W L F Y ++E++
Sbjct: 72 YYFGERKDVLDRETKRKIGVCLQKSAFFENLTVWETLKLFRGLYGTGLD-----LKEVMG 126
Query: 121 LVGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQ 180
L L ++ + VK+ S G QRL +A A INDPE++ LDEPT+GLDPQ R + D I
Sbjct: 127 LFSLENIEKKMVKTLSGGQLQRLAVAVAFINDPEIVFLDEPTTGLDPQARRQIWDTIEHF 186
Query: 181 KKQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYEIKVETKQP 240
K GKT+F ++H + E E L+D V II GK+ GT + + G + VE
Sbjct: 187 KNLGKTIFLTTHYMEEAERLSDHVCIIDHGKIIAEGTPSSL----ISSSGLKTVVE---- 238
Query: 241 FPEIELPDVIRIEKIADNKVLIFAKSDIREILSEELSKRGITVLSLEIEEPSLEDVFLK 299
F + +V +EK ++ V+ ++D E L ++L K V ++ I +P+LEDVFLK
Sbjct: 239 FDCDQDVNVRYLEKKENHYVV---ETDAPEELIKDLLKNW-NVSNIVIRKPNLEDVFLK 293
>pir||T36523 probable ABC-type transport system ATP-binding protein -
Streptomyces coelicolor >gi|4753857|emb|CAB42020.1|
(AL049754) putative ABC transporter ATP-binding protein
[Streptomyces coelicolor A3(2)]
Length = 311
Score = 173 bits (434), Expect = 2e-42
Identities = 105/299 (35%), Positives = 172/299 (57%), Gaps = 13/299 (4%)
Query: 2 KVIEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSVR 61
K I + L KS+G+ A+D L LEVE G + GFLGPNGAGK+TTI +LG++ D+G+ +
Sbjct: 3 KAISVSGLHKSFGRTHALDGLDLEVETGEVHGFLGPNGAGKSTTIRVLLGLLRADAGAAQ 62
Query: 62 LLGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLKL 121
+LG D + + ++A R+ ++P + T++ L+ +D + + + E +L
Sbjct: 63 VLGRDPWADAVEAHRRIAYVPGDVTLWRNLSGGEVIDLYGRLRGGLDTRRRAELVERFEL 122
Query: 122 VGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQK 181
+K +++SKG +Q++ L A +D +LLILDEPTSGLDP + + + E++
Sbjct: 123 DPT-----KKGRTYSKGNRQKVALVAAFASDVDLLILDEPTSGLDPLMEEVFQRCVEEER 177
Query: 182 KQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYEIKVE-TKQP 240
++G+TV SSHILSEVEEL D+V II KG+ G+L +++ L + E P
Sbjct: 178 ERGRTVLLSSHILSEVEELCDRVSIIRKGRTVESGSLADLR----HLTRTSVTAELAGAP 233
Query: 241 FPEIELPDVIRIEKIADNKVLIFAKSDIREILSEELSKRGITVLSLEIEEPSLEDVFLK 299
LP V ++ + ++V + +D + + LS+ G V SL P+LE++FL+
Sbjct: 234 NGLTRLPGVHGLD-VRGHRVRLQVDTDKLDAVLRSLSETG--VRSLTSTPPTLEELFLR 289
>pir||A83142 probable ATP-binding component of ABC transporter PA4037 [imported]
- Pseudomonas aeruginosa (strain PAO1)
>gi|9950232|gb|AAG07424.1|AE004820_9 (AE004820) probable
ATP-binding component of ABC transporter [Pseudomonas
aeruginosa]
Length = 308
Score = 173 bits (434), Expect = 2e-42
Identities = 104/300 (34%), Positives = 165/300 (54%), Gaps = 6/300 (2%)
Query: 3 VIEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSVRL 62
+I+I+ L+K + V++LS +++G I G LGPNGAGK+TT+ + G + P +GSVR+
Sbjct: 1 MIDIDRLSKRFSGRTVVNDLSFRIDRGEIVGLLGPNGAGKSTTLKMLSGFLAPSAGSVRI 60
Query: 63 LGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLKLV 122
G+D+ + +A++ +G+LPENA Y E+T L F AS + +EK +RI+ + +
Sbjct: 61 FGFDMQDKARQAQKLIGYLPENAPSYGEMTVEGFLAFVASIRDYSGREKRRRIDSAMDCM 120
Query: 123 GLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQKK 182
L D R +++ SKG K+R+ LAQA+++DPELL+LDEPT GLDP V+ ++ +
Sbjct: 121 ELRDERRSIIETLSKGFKRRVALAQAILHDPELLLLDEPTDGLDPNQKHQVRQLV-KNLS 179
Query: 183 QGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYEIKVETK-QPF 241
+ K V S+HIL EV + + +I G+L T E++ + + +E P
Sbjct: 180 ESKIVVISTHILEEVSFMCSRALVINGGRLLADNTPGELRTRSRYHHAVSLSIEAPVDPL 239
Query: 242 PEIELPDVIRIEKIADN----KVLIFAKSDIREILSEELSKRGITVLSLEIEEPSLEDVF 297
LP V IE D +L + I L+ + G V + E LE+VF
Sbjct: 240 AIAMLPGVAGIEGRPDRAGTLTILARPGAQILPALNRLIHGSGWRVSGVRTEHGQLEEVF 299
>pir||E83222 NosF protein PA3394 [imported] - Pseudomonas aeruginosa (strain
PAO1) >gi|9949530|gb|AAG06782.1|AE004760_10 (AE004760)
NosF protein [Pseudomonas aeruginosa]
Length = 304
Score = 172 bits (432), Expect = 4e-42
Identities = 103/297 (34%), Positives = 160/297 (53%), Gaps = 8/297 (2%)
Query: 1 MKVIEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSV 60
M ++EI+ T YG A+ L L +E G + G LG NGAGKTTTI +LG++ P G V
Sbjct: 1 MSLVEIDGATLRYGALTALSGLDLRLEPGEVLGLLGHNGAGKTTTIKLVLGLLAPSEGRV 60
Query: 61 RLLGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLK 120
R+LG+D ++A+ +LG+LPEN T Y +L+ L FA + E + +E+
Sbjct: 61 RVLGHDA--RSLEARRQLGYLPENVTFYPQLSGAETLRHFARLKGVAPAEAARLLEQ--- 115
Query: 121 LVGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQ 180
VGL R++K++SKGM+QRL LAQAL+ +P LL+LDEPT GLDP + ++
Sbjct: 116 -VGLGHAARRRLKTYSKGMRQRLGLAQALLGEPRLLLLDEPTVGLDPLATVELYQLLDRL 174
Query: 181 KKQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYEIKVETKQP 240
+ QG + SH+L VE D+ I+ G+L+ G+L E++++ +
Sbjct: 175 RGQGTGIVLCSHVLPGVETHIDRAAILAGGRLQVAGSLAELRRKAALPTRVRLASPHNPQ 234
Query: 241 FPEIELPDVIRIEKIADNKVLIFAKSDIREILSEELSKRGITVLSLEIEEPSLEDVF 297
+ E + ++ D ++ + R+ + E L LEI PSLED++
Sbjct: 235 WLERWHRAGLAARRLDDQRIEVLLDDAERDGVLEAL--LAAREFDLEILPPSLEDLY 289
>gb|AAC62423.1| (AF084104) NatA [Bacillus firmus]
Length = 299
Score = 172 bits (431), Expect = 5e-42
Identities = 102/299 (34%), Positives = 166/299 (55%), Gaps = 8/299 (2%)
Query: 4 IEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSVRLL 63
++I N+TK +G+ AVD LSLE+ G +FG LG NGAGKTTT MLG++ P G +
Sbjct: 3 LKINNITKRFGQSVAVDQLSLEIPSGEMFGMLGANGAGKTTTFRMMLGLLEPTEGEMTWK 62
Query: 64 GYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLKLVG 123
G I +G+LPE +Y +L L + + K++ + L+
Sbjct: 63 GEKI---DYSRTNVIGYLPEERGLYPKLKVRDQLIYLGRLKGMHKKDIIPEMRMWLERFK 119
Query: 124 LWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQKKQ 183
+ D ++++ SKG +Q++ ++I+ PELLILDEP SGLDP A L+K+ +++ KK+
Sbjct: 120 VTDYETKRIEELSKGNQQKIQFIASVIHRPELLILDEPFSGLDPVNAELLKEAVIDLKKK 179
Query: 184 GKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYEIKVETKQPFPE 243
G T+ FSSH + VEEL + I+ G G L EIK+ + I +E ++ F
Sbjct: 180 GTTIVFSSHRMDHVEELCQHLCILRHGTPVVKGELREIKRSF---RNKFIVIEGERSFET 236
Query: 244 IE-LPDVIRIEKIADNKVLIFAKSDIREILSEELSKRGITVLSLEIEEPSLEDVFLKTI 301
++ LP V + ++ L ++ +++ E++K G V E+EEPSL+D+F++ +
Sbjct: 237 LKNLPGVKKFQQKQGGVRLQVEDEEVAKVIFAEVAKSGY-VRRFEVEEPSLQDIFIEKV 294
>gb|AAC36155.1| (AF003632) PilH [Myxococcus xanthus]
Length = 326
Score = 172 bits (431), Expect = 5e-42
Identities = 106/309 (34%), Positives = 176/309 (56%), Gaps = 19/309 (6%)
Query: 4 IEIENLTKSYG-------KFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPD 56
+ I L+K+Y + KA+ L LE+ G ++G LGPNGAGK+TTI ++G++
Sbjct: 13 VSIRGLSKTYKVGFFLNKQVKALQGLDLEIAPGQVYGLLGPNGAGKSTTIKILMGLVRAS 72
Query: 57 SGSVRLLGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIE 116
G L G + ++ ++GFLPEN ++YE LT + + + E ++R+E
Sbjct: 73 EGQALLFGEPPDRPHVR--RQVGFLPENPSLYEYLTGREFVTLAGRIFGLSGHELDQRVE 130
Query: 117 ELLKLVGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDI 176
+L VG+ +++ +SKGM QR LAQALI+ P LL+LDEPTSGLDP G R ++D+
Sbjct: 131 RVLGDVGMGRASDLQIRRYSKGMVQRTALAQALISGPRLLVLDEPTSGLDPLGRRQMRDL 190
Query: 177 ILEQKKQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEI---KKQYMELEGYEI 233
IL ++ +G T+ F +HI+S+VE L D+V ++V G+ G+++++ K +E+ + +
Sbjct: 191 ILAERAKGTTILFCTHIISDVESLCDRVVVLVGGRRVQEGSVQDLVSAKAPSVEMVVHGL 250
Query: 234 KVETKQPFPEIELPDVIRIEKIADNKVLI-FAKSDIREILSEELSKRGITVLSLEIEEPS 292
+E Q L + D++VL+ +D +L +SK G V ++ S
Sbjct: 251 PLEVLQ-----SLGFSYEHAQQLDSRVLLRIPDADSHGLLQTVISKGG-RVSRVQPARFS 304
Query: 293 LEDVFLKTI 301
LED+FL+ +
Sbjct: 305 LEDLFLEAM 313
>dbj|BAB04885.1| (AP001511) ABC transporter (ATP-binding protein) [Bacillus
halodurans]
Length = 299
Score = 171 bits (430), Expect = 7e-42
Identities = 99/307 (32%), Positives = 174/307 (56%), Gaps = 18/307 (5%)
Query: 4 IEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSVRLL 63
+ I+ +TK +G F AV+NL + V KG +FG LG NGAGKTTT +LG++ P G++
Sbjct: 3 LTIDGVTKKFGTFTAVNNLHVSVPKGEMFGMLGANGAGKTTTFRMILGLLEPTEGTIHWR 62
Query: 64 GYDIFKEPIKAKER--LGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLKL 121
++P+ + +G+LPE +Y +LT L + + Q+ +K ++ L+
Sbjct: 63 -----EQPLTYNQTNCIGYLPEERGLYPKLTVKDQLKYLGRLKGMKTQDIQKEMKMWLER 117
Query: 122 VGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQK 181
+ + +++V+ SKG +Q++ ++++ PELLILDEP SGLDP L+K +++ K
Sbjct: 118 FEVPEYEHKRVEQLSKGNQQKIQFIASVLHRPELLILDEPFSGLDPVNVELLKKAVIDLK 177
Query: 182 KQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQY----MELEGYEIKVET 237
K+G T+ FSSH + VEEL + I+ +G G L+ IK+ + + ++G E +E
Sbjct: 178 KEGTTILFSSHRMEHVEELCQHLCILHRGSPVVEGNLKNIKRSFGKKNVIIQG-EFALE- 235
Query: 238 KQPFPEIELPDVIRIEKIADNKVLIFAKSDIREILSEELSKRGITVLSLEIEEPSLEDVF 297
P +++P V+R ++ + A + ++L + ++ G V E+EEPSL D+F
Sbjct: 236 ----PLVDIPGVLRHQETSAGAKFQIANEETAKLLFQAVATAGF-VQKFELEEPSLHDIF 290
Query: 298 LKTIYRR 304
++ + R
Sbjct: 291 VEKVGTR 297
>pir||A39025 probable membrane protein, cpn60 5'-region - Synechocystis sp. (PCC
6803) >gi|154464|gb|AAA27283.1| (M57517) chaperonin 60
[Synechocystis sp.]
Length = 354
Score = 171 bits (430), Expect = 7e-42
Identities = 108/311 (34%), Positives = 172/311 (54%), Gaps = 18/311 (5%)
Query: 3 VIEIENLTKSYG-------KFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIP 55
V+E ++K Y K +++ LS+ V++G FG LGPNGAGKTT + +LG+I
Sbjct: 47 VVETWEISKIYRTGFWMNQKVESLKPLSIAVQQGETFGLLGPNGAGKTTLLKILLGVIRA 106
Query: 56 DSGSVRLLGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRI 115
G LLG I + K+R+G+LPENA Y+ LTAW LD+ S + I KQE+++RI
Sbjct: 107 SGGRGTLLGKPIGDR--QTKQRVGYLPENAYFYDFLTAWEFLDYIGSLFQIGKQERQRRI 164
Query: 116 EELLKLVGLWD--VRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLV 173
+ LVGL + ++++ +SKGM QR+ +AQALINDPE++ LDEP SGLDP GA
Sbjct: 165 LAMCDLVGLAQKTAKKKQLRQYSKGMLQRVGMAQALINDPEVVFLDEPMSGLDPWGATKC 224
Query: 174 KDIILEQKKQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYEI 233
+ + + K F + +E++ D++ I+ +G+L G+L E+ EGYE+
Sbjct: 225 GKLFFPSRNRAKPSFSTPTFWRTLEQICDRIAILARGELLCSGSLAEVLGND---EGYEV 281
Query: 234 KVETKQPFPEIELPDVIRIEKIADNKVLIFAKSDIREILSEELSKRGITVLSLEIEEPSL 293
++ + E L + + + D+ + L + L ++S+ + PSL
Sbjct: 282 VLKGGE---EEALGKYLANLSQEQDVWHGHYQGDV-QALVDALPSLNARLISMNLARPSL 337
Query: 294 EDVFLKTIYRR 304
ED F++ + R
Sbjct: 338 EDYFIRQLRER 348
>pir||C69819 ABC transporter (ATP-binding protein) homolog yhaQ - Bacillus
subtilis >gi|2226131|emb|CAA74424.1| (Y14078)
Hypothetical protein [Bacillus subtilis]
>gi|2633325|emb|CAB12829.1| (Z99109) similar to ABC
transporter (ATP-binding protein) [Bacillus subtilis]
Length = 298
Score = 171 bits (429), Expect = 9e-42
Identities = 98/299 (32%), Positives = 167/299 (55%), Gaps = 6/299 (2%)
Query: 3 VIEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSVRL 62
++ I+++TK++G +KAVD L L++ + +FG LG NGAGKTTT +LG++ GS+
Sbjct: 1 MLTIDHVTKTFGDYKAVDGLDLDIPEQQMFGLLGANGAGKTTTFRMILGLLSITEGSISW 60
Query: 63 LGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLKLV 122
G + ++G+LPE +Y ++ L + A + K+E K + L+
Sbjct: 61 KGRPV---NYHISNKIGYLPEERGLYPKMKVRDQLVYLARLKGMEKREAVKELGTWLERF 117
Query: 123 GLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQKK 182
+ D +KV+ +KG +Q++ A+++ PELLILDEP SGLDP L+K+ ++ K
Sbjct: 118 NITDYENKKVEELAKGNQQKIQFISAVLHKPELLILDEPFSGLDPVNVELLKEAVISLKN 177
Query: 183 QGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYEIKVETKQPFP 242
G ++ FSSH + VEEL + + I+ KGK G L+EIK+ + + + I + F
Sbjct: 178 SGVSILFSSHRMEHVEELCENLCILQKGKPVVQGKLKEIKRSFGK-KNVTIHSDDDLRFL 236
Query: 243 EIELPDVIRIEKIADNKVLIFAKSDIREILSEELSKRGITVLSLEIEEPSLEDVFLKTI 301
+ +++ ++ AD L A DI + + L +G + E+EEPSL D+F++ +
Sbjct: 237 QSH-EGILQWKETADGVKLQIANEDISQEIFAMLQGKGF-IRKFELEEPSLHDIFIEKV 293
>gb|AAK42768.1| ABC transporter, ATP binding protein [Sulfolobus solfataricus]
Length = 309
Score = 171 bits (429), Expect = 9e-42
Identities = 110/303 (36%), Positives = 171/303 (56%), Gaps = 19/303 (6%)
Query: 1 MKVIEIENLTKSYGK-FKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGS 59
+K I+I K K KAVD++S E+E+ +GPNGAGKTT I + +IIP SG
Sbjct: 2 IKTIDISKTFKIKNKEIKAVDDVSFEIERNSTGALVGPNGAGKTTIIKMLSTLIIPSSGD 61
Query: 60 VRLLGYDIFKEPIKAKERLGFLPENATI-YEELTAWRNLDFFASFYNIPKQEKEKRIEEL 118
+ GY I KE K +E +G + + + Y LTA NL FFAS N+ + KR +E+
Sbjct: 62 ALVNGYSITKEEKKVRESIGLVTVSERLFYYRLTALENLIFFASLQNLSLSDARKRAKEV 121
Query: 119 LKLVGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIIL 178
L++VGL + FS GM+++L LA+ALI DP +L+LDEPT GLDP AR+ +D++
Sbjct: 122 LEIVGLSEWGNIPYMKFSTGMQRKLALARALITDPPVLLLDEPTLGLDPLSARMFRDLV- 180
Query: 179 EQKKQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYEIKVETK 238
+ + KT+ +SH + ++EELA+K+ ++ KGK G + +K G I+VE
Sbjct: 181 RRIGRDKTILLTSHYMKDIEELAEKIILLKKGKAIAEGNKDNLKNYL----GKVIEVEVN 236
Query: 239 QPFPEIELPDVIRIEKIADNKVLIFAKSDIREILSEELSKRGITVLSLEIEEPSLEDVFL 298
+ +P + L + ++ + +L + ++ E+ + K EEPSLEDV++
Sbjct: 237 E-YP-LTLGKYV-VQTSTNYYILRIPEKELDELKDYRVIKE---------EEPSLEDVYI 284
Query: 299 KTI 301
I
Sbjct: 285 YLI 287
>sp|P46903|NATA_BACSU ATP-BINDING TRANSPORT PROTEIN NATA (NA+ ABC TRANSPORTER)
>gi|7445612|pir||A69666 Na+ ABC transporter (extrusion)
(ATP-binding protein) natA - Bacillus subtilis
>gi|973330|gb|AAB53022.1| (U30873) NatA [Bacillus
subtilis] >gi|2415726|dbj|BAA22236.1| (AB000617) NatA
[Bacillus subtilis] >gi|2632561|emb|CAB12069.1| (Z99105)
Na+ ABC transporter (ATP-binding protein) [Bacillus
subtilis]
Length = 246
Score = 170 bits (426), Expect = 2e-41
Identities = 84/206 (40%), Positives = 134/206 (64%), Gaps = 1/206 (0%)
Query: 17 KAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSVRLLGYDIFKEPIKAKE 76
KAV ++SL +EKG + G LG NGAGKTT + + ++ P G + + G+D K+P + K+
Sbjct: 19 KAVRDVSLTIEKGEVVGILGENGAGKTTMLRMIASLLEPSQGVITVDGFDTVKQPAEVKQ 78
Query: 77 RLGFLPENAT-IYEELTAWRNLDFFASFYNIPKQEKEKRIEELLKLVGLWDVRYRKVKSF 135
R+G L T +Y+ +TA NL +F Y + + E + RIE+L K G+ D R+V F
Sbjct: 79 RIGVLFGGETGLYDRMTAKENLQYFGRLYGLNRHEIKARIEDLSKRFGMRDYMNRRVGGF 138
Query: 136 SKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQKKQGKTVFFSSHILS 195
SKGM+Q++ +A+ALI+DP++++ DEPT+GLD + + ++ I + K++ KT+ FSSHI+
Sbjct: 139 SKGMRQKVAIARALIHDPDIILFDEPTTGLDITSSNIFREFIQQLKREQKTILFSSHIME 198
Query: 196 EVEELADKVGIIVKGKLRTVGTLEEI 221
EV+ L D V +I G++ G LE +
Sbjct: 199 EVQALCDSVIMIHSGEVIYRGALESL 224
>emb|CAA75761.1| (Y15759) ORF1 [Streptomyces rochei]
Length = 363
Score = 170 bits (426), Expect = 2e-41
Identities = 101/308 (32%), Positives = 165/308 (52%), Gaps = 14/308 (4%)
Query: 4 IEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSVRLL 63
IE L K +G+ +AVD + L V G ++G LGPNGAGKTTT+ + ++ PD G R+
Sbjct: 7 IETTGLVKVFGENRAVDGVDLRVPAGTVYGLLGPNGAGKTTTVKVLATLLRPDGGEARVF 66
Query: 64 GYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLKLVG 123
G D+ + + R+ + A++ E+LT NL A K +R +LL G
Sbjct: 67 GRDVLADADAVRGRVSLTGQYASVDEDLTGTENLLLLARLLGHSKPAARERAAQLLDAFG 126
Query: 124 LWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQKKQ 183
L + R+VKS+S GM++R+ +A +++N P+LL LDEPT+GLDP+ V DI+ Q
Sbjct: 127 LSEAAGRQVKSYSGGMRRRIDIAASILNTPDLLFLDEPTTGLDPRSRNQVWDIVRAVVAQ 186
Query: 184 GKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQ------YMELEGYEIKVET 237
G TV ++ L E ++LA ++ +I G++ GT E+K ++ L E + E
Sbjct: 187 GTTVLLTTQYLDEADQLASRIAVIDHGRVIAEGTKGELKASVGSGAVHLRLREAEQRPEA 246
Query: 238 KQPFP-------EIELPDVIRIEKIADNKVLIFAKSDIREILSEELSKRGITVLSLEIEE 290
++ +++ V ++ + + A LS EL++ GITV + + +
Sbjct: 247 ERILALALNATVQLDADPVALTARVNGHGTELGAAEQAARALS-ELARAGITVDNFALGQ 305
Query: 291 PSLEDVFL 298
PSL++VFL
Sbjct: 306 PSLDEVFL 313
>pir||H75077 abc transporter, ATP-binding protein PAB1696 - Pyrococcus abyssi
(strain Orsay) >gi|5458437|emb|CAB49925.1| (AJ248286)
ABC transporter, ATP-binding protein [Pyrococcus abyssi]
Length = 253
Score = 170 bits (426), Expect = 2e-41
Identities = 86/242 (35%), Positives = 150/242 (61%)
Query: 3 VIEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSVRL 62
+I +ENL K +G + + +S V+ G I+G LGPNG+GK+TT+ + GII G V +
Sbjct: 1 MIIVENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIV 60
Query: 63 LGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLKLV 122
G ++ K+P++ K +G++PE +YE LT F IPK E+R+ +L++
Sbjct: 61 GGVEVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAF 120
Query: 123 GLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQKK 182
+ + + + S G KQ++ L +L++DP++LILDE +GLDP+ AR+ ++++ E K+
Sbjct: 121 EIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKE 180
Query: 183 QGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYEIKVETKQPFP 242
+GK++ FS+H+L+ E + D+VGII +G++ GT+EE+K+ E ++ ++ Q
Sbjct: 181 EGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKEERLEDVFLKLTQAKE 240
Query: 243 EI 244
EI
Sbjct: 241 EI 242
>gi|11498626 ABC transporter, ATP-binding protein [Archaeoglobus fulgidus]
>gi|7445710|pir||E69377 ABC transporter, ATP-binding
protein homolog - Archaeoglobus fulgidus
>gi|2649574|gb|AAB90222.1| (AE001033) ABC transporter,
ATP-binding protein [Archaeoglobus fulgidus]
Length = 275
Score = 169 bits (425), Expect = 3e-41
Identities = 99/305 (32%), Positives = 168/305 (54%), Gaps = 35/305 (11%)
Query: 3 VIEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSVRL 62
++E+ NL K YG F+AV +S V +G + G +G NGAGK+TT+ + G+I PD G VR
Sbjct: 1 MLEVRNLFKRYGSFEAVKGISFSVRRGEVLGLIGENGAGKSTTLKILAGLIRPDGGEVRY 60
Query: 63 LGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLKLV 122
G D +E K +G+LPE +Y+ +T L+ FA Y++ I+ LL+ +
Sbjct: 61 FGKDFDEE---MKRIIGYLPEIDALYDNMTVSEYLNLFADIYDVRAD-----IDGLLERL 112
Query: 123 GLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQKK 182
L D + + SKGM++++ +A+ L++DPE+L+ DEPT GLDP + + +++ E +
Sbjct: 113 NLPD---KYISDLSKGMRRKVSIARTLLHDPEVLVYDEPTGGLDPTTSLSIAELLRELAE 169
Query: 183 QGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYEIKVETKQPFP 242
+GK + FS+H + VE +ADKV ++ GK G+LEE+
Sbjct: 170 RGKIIVFSAHNMYYVERIADKVVVMKGGKALYFGSLEEL--------------------- 208
Query: 243 EIELPDVIRIEKIADNKVLIFAKSDIREIL--SEELSKRGITVLSLEIEEPSLEDVFLKT 300
I + ++E D + ++ E+L +E++ K+G ++ +E E P LE+V+
Sbjct: 209 -IGQNTIYKVEYTIDGRKESVKLFEVEELLDFAEKVRKQGGKIIEIEREVPRLENVYFSL 267
Query: 301 IYRRD 305
I R++
Sbjct: 268 IGRKE 272
>emb|CAC11986.1| (AL445065) ABC transporter cdd4-like protein ScnF related protein
[Thermoplasma acidophilum]
Length = 297
Score = 169 bits (425), Expect = 3e-41
Identities = 98/252 (38%), Positives = 144/252 (56%), Gaps = 3/252 (1%)
Query: 1 MKVIEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSV 60
M I + N++K YG A++ +S V LGPNGAGKTT + M II P G+V
Sbjct: 1 MMGISVSNVSKRYGDLMALNRVSFNVNGTGCLVLLGPNGAGKTTLMKIMTNIIRPSEGNV 60
Query: 61 RLLGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLK 120
+ G+++ + P KA E +G L E Y +T + L F I K++ ++ +
Sbjct: 61 SINGFNVRENPGKALETVGSLIEQPEFYPYITGYEALMFTCRIRGISKEKCISEVQRVST 120
Query: 121 LVGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQ 180
L D RK K +S+GMKQR+ LA ALI DP ++ILDEPT GLDP G ++DII++
Sbjct: 121 LTHCRDYLNRKTKEYSRGMKQRVGLATALIGDPSIIILDEPTFGLDPNGMMEIRDIIMKM 180
Query: 181 KKQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYEIKVETKQP 240
KK+ K + S+H++SE E LAD +GII G+L G +E K++Y+E++G + P
Sbjct: 181 KKE-KLIVLSTHLISEAELLADYIGIIDHGRLMHFGPVE--KQRYLEVKGQINEAHVNVP 237
Query: 241 FPEIELPDVIRI 252
EI D +R+
Sbjct: 238 GVEIVKKDDVRM 249
>gi|11498611 ABC transporter, ATP-binding protein [Archaeoglobus fulgidus]
>gi|7445743|pir||F69375 ABC transporter, ATP-binding
protein homolog - Archaeoglobus fulgidus
>gi|2649585|gb|AAB90232.1| (AE001034) ABC transporter,
ATP-binding protein [Archaeoglobus fulgidus]
Length = 285
Score = 169 bits (424), Expect = 3e-41
Identities = 110/302 (36%), Positives = 172/302 (56%), Gaps = 25/302 (8%)
Query: 1 MKVIEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSV 60
M ++EI NL+ +G F AV L+L V +G I G LGPNG+GKTTTI ++ G++ P G +
Sbjct: 1 MNILEISNLSVRFGDFYAVKGLTLNVRRGEILGLLGPNGSGKTTTIRAIFGMV-PYEGEI 59
Query: 61 RLLGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLK 120
R + G++P+N+ +Y L+ NL FFAS Y I E E+R+EE+LK
Sbjct: 60 RNYATSV-----------GWMPQNSPLYLNLSVEENLRFFASLYGI---EDERRVEEMLK 105
Query: 121 LVGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQ 180
LV L R R VK+ S GM+QR +LA A+++DPELL+LDEPT+G+DP + +
Sbjct: 106 LVQLERYRKRLVKNLSGGMRQRAMLACAMLHDPELLVLDEPTAGVDPPLRVSFWEQFEKL 165
Query: 181 KKQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYEIKVETKQP 240
+++GKT+ ++H + E E +++ +I G GT EEIK++ G + +E
Sbjct: 166 REEGKTILVTTHYMDEAER-CERLVLIRNGSKIAEGTPEEIKRRAC---GDRLLLEVDDA 221
Query: 241 FPEIELPDVIRIEKIADNKVLI---FAKSDIREILSEELSKRGITVLSLEIEEPSLEDVF 297
+ R + KV++ A S+ +I+ E LS+ G+ V +EI +LE+ F
Sbjct: 222 LAASRILSDYR--SWINGKVVVEVDDAASEAPKII-EMLSRAGVKVFRVEIRRCTLEEAF 278
Query: 298 LK 299
++
Sbjct: 279 MR 280
>gb|AAF99691.1|AF267498_1 (AF267498) MutF [Streptococcus mutans]
Length = 233
Score = 169 bits (424), Expect = 3e-41
Identities = 93/210 (44%), Positives = 137/210 (64%), Gaps = 7/210 (3%)
Query: 3 VIEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSVRL 62
++E +NLTK +GK AV+ L+L+VE+ I+G LGPNG+GK+TT+ + G++ SG + +
Sbjct: 4 MLETKNLTKQFGKQTAVNQLNLKVERHSIYGLLGPNGSGKSTTLKMITGMLRKTSGHILI 63
Query: 63 LGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLKLV 122
G+D ++ + E +G L E+ +YE LTA NL +P + RI+E+LK+V
Sbjct: 64 DGHDWSRKDL---ENIGALIESPPLYENLTARENLKVRTLMLGLP----DSRIDEVLKIV 116
Query: 123 GLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQKK 182
L + ++ FS GMKQRL +A AL+N P+LLILDEPT+GLDP G + ++++I
Sbjct: 117 DLTNTGKKRAGQFSMGMKQRLGIAIALLNSPQLLILDEPTNGLDPIGIQELRNLIRSFPT 176
Query: 183 QGKTVFFSSHILSEVEELADKVGIIVKGKL 212
QG TV SSHILSE++ AD +GII G L
Sbjct: 177 QGITVIISSHILSEIQMTADHIGIIANGVL 206
>pir||S74476 ABC-type transport protein slr1113 - Synechocystis sp. (strain PCC
6803) >gi|1651700|dbj|BAA16628.1| (D90899) ABC
transporter [Synechocystis sp.]
Length = 332
Score = 168 bits (422), Expect = 6e-41
Identities = 102/309 (33%), Positives = 163/309 (52%), Gaps = 16/309 (5%)
Query: 7 ENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSVRLLGYD 66
+ LTK + + AV N+ L + +G ++G +GPNGAGKTT I + P G + L G
Sbjct: 17 QGLTKRFDRQGAVTNVDLSIAEGAVYGLMGPNGAGKTTLIRMLATAEEPTKGEIYLFGDR 76
Query: 67 IFK--EPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLKLVGL 124
+ + ++ K+ LG+LP++ +YE+L W LD+FA Y++ + RI+E+L+LV L
Sbjct: 77 LVAGADNLRIKQYLGYLPDDYPLYEDLNVWDYLDYFARLYHLKNPGRRHRIQEVLELVQL 136
Query: 125 WDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQKKQG 184
R+ ++ S S+GMKQRL LA+ +I++P LL+LDEP SGLDP + +DII + G
Sbjct: 137 TSKRHSRINSLSRGMKQRLSLARTIIHEPILLLLDEPVSGLDPLARQQFRDIIRVLQAAG 196
Query: 185 KTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYME-------LEGYEIKVET 237
T+ SSH+LS++ EL +G++ G L TL ++ + + LEG E +
Sbjct: 197 MTILISSHVLSDLAELCTAIGVMELGCLVESTTLADLYNRLGQRTISIFLLEGVEQLQDC 256
Query: 238 KQPFPEIELPDVIRIEKIADN-------KVLIFAKSDIREILSEELSKRGITVLSLEIEE 290
+ P +E + + N V+ + L L G V ++
Sbjct: 257 LKNQPGVEDWQINYDQGDQPNSAPGTHCSVIFSGSPEDSANLLRNLIYAGCRVSQFHCQQ 316
Query: 291 PSLEDVFLK 299
LE +FLK
Sbjct: 317 EDLESIFLK 325
>pir||F82303 ABC transporter, ATP-binding protein VC0589 [imported] - Vibrio
cholerae (group O1 strain N16961)
>gi|9655020|gb|AAF93756.1| (AE004144) ABC transporter,
ATP-binding protein [Vibrio cholerae]
Length = 305
Score = 168 bits (422), Expect = 6e-41
Identities = 96/302 (31%), Positives = 178/302 (58%), Gaps = 4/302 (1%)
Query: 1 MKVIEIENLTKSY-GKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGS 59
M +EIE L K+Y G F+A+ +SL+V+KG + LGPNGAGK+TTI + ++ SG
Sbjct: 1 MYALEIEQLRKTYAGGFEALKGISLQVKKGDFYALLGPNGAGKSTTIGIISSLVNKTSGK 60
Query: 60 VRLLGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELL 119
V + GYD+ + AK++LG +P+ T + + A +Y +PK ++R ++ L
Sbjct: 61 VTVFGYDLDSQLELAKQKLGLVPQEFNFNPFETVEQIVLQQAGYYGVPKALAKERAKKYL 120
Query: 120 KLVGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILE 179
+ LW+ R + ++ S GMK+RL++A+AL+++P+LLILDEPT+G+D + R + + + +
Sbjct: 121 TQLDLWEKRSERARNLSGGMKRRLMIARALMHEPQLLILDEPTAGVDIELRRSMWEFLKQ 180
Query: 180 QKKQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYEIKVETKQ 239
QG T+ ++H L E E L +GII +G+L T++ + + + +E + + V+
Sbjct: 181 INAQGVTIILTTHYLEEAEMLCRHIGIIQRGELIENTTMKSLLGK-LHVETFVLDVDGNA 239
Query: 240 PFPEIELPDVIRIEKIADNKVLIFAKSDIREILSEELSKRGITVLSLEIEEPSLEDVFLK 299
P ++ V++ + + + + KS + +L+++G+ VLS+ + LE++F+
Sbjct: 240 PIAPLQ--GVVKQQMVEGSLEIELEKSQGINHVFTQLTEQGVKVLSMRNKVNRLEELFVS 297
Query: 300 TI 301
+
Sbjct: 298 IV 299
>sp|P55476|NODI_RHISN NODULATION ATP-BINDING PROTEIN I >gi|2182424|gb|AAB91694.1|
(AE000076) NodI [Rhizobium sp. NGR234]
Length = 343
Score = 168 bits (421), Expect = 8e-41
Identities = 105/296 (35%), Positives = 154/296 (51%), Gaps = 5/296 (1%)
Query: 4 IEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSVRLL 63
IE+ N++KSYG VD LS + G FG LGPNGAGK+T +LG+ PD G++ +L
Sbjct: 45 IELTNVSKSYGDKVVVDQLSFTITSGECFGLLGPNGAGKSTVSRLVLGLAPPDEGTITVL 104
Query: 64 GYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLKLVG 123
G + A+ R+G +P+ T+ E TA NL F ++ + +E E+ I LL
Sbjct: 105 GEPVPARARLARSRIGVVPQFDTLDREFTARENLLVFGRYFGLHTRELEEAIPPLLDFAR 164
Query: 124 LWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQKKQ 183
L V S GM++RL LA ALINDP+LLILDEPT+GLDP L+ + +
Sbjct: 165 LESKADVPVAQLSGGMQRRLTLACALINDPQLLILDEPTTGLDPHARHLIWERLRSLLAL 224
Query: 184 GKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYEIKVETKQPFPE 243
GKT+ ++H + E + L D++ +I G+ G + + + + EI +
Sbjct: 225 GKTILLTTHFMEEADRLCDRLCVIEHGRKIVEGRPHALIDEQIGCDVIEIYGGNPRELTS 284
Query: 244 IELPDVIRIEKIADNKVLIFAKSDIREILSEELSKRGITVLSLEIEEPSLEDVFLK 299
+ P R+E + L SD ++ L RG T L L P+LEDVFL+
Sbjct: 285 VVGPYAQRVE--VSGETLFCYSSDPEQV---RLQLRGRTGLRLLQRPPNLEDVFLR 335
>pir||C83188 probable ATP-binding component of ABC transporter PA3672 [imported]
- Pseudomonas aeruginosa (strain PAO1)
>gi|9949834|gb|AAG07060.1|AE004786_12 (AE004786)
probable ATP-binding component of ABC transporter
[Pseudomonas aeruginosa]
Length = 307
Score = 168 bits (421), Expect = 8e-41
Identities = 104/303 (34%), Positives = 172/303 (56%), Gaps = 13/303 (4%)
Query: 3 VIEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSVRL 62
+IE NL K +G AVD+LS +VE G + GFLGPNGAGK+TT+ + G + P +G+ +
Sbjct: 1 MIETRNLGKRFGSRVAVDDLSFQVETGEVLGFLGPNGAGKSTTMKMLTGFLAPCAGTASI 60
Query: 63 LGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLKLV 122
G+DI ++A+ +G+LPE + Y E+T LDF A K +R+ L L+
Sbjct: 61 FGFDIRNRTLQAQRLIGYLPEGSPCYAEMTVQGFLDFIAEIRGYRGAGKRERVARALGLL 120
Query: 123 GLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQKK 182
L +VR + +++ SKG ++R+ LAQA++++P L+LDEPT GLDP V+++I
Sbjct: 121 ELDEVRRQTIETLSKGFRRRVGLAQAILHEPRALVLDEPTDGLDPNQKHQVRELI-RGLA 179
Query: 183 QGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEI--KKQYMELEGYEIKVETKQP 240
Q + V S+HIL EV L + +I G+L T E+ + +Y + + + + +P
Sbjct: 180 QERIVIISTHILEEVSALCSRALVIGGGRLLADSTPLELASRSRYHQ----AVTLYSDEP 235
Query: 241 FPEIE---LPDVIRIEK-IADNKVLIFAK--SDIREILSEELSKRGITVLSLEIEEPSLE 294
+ LP V IE+ A+ + + A+ + I +S +++RG + L++E L+
Sbjct: 236 LDAVALAVLPGVAGIEENPAEGSLTVLAQPGAVIFPQVSGLVAERGWRIRELDVERGRLD 295
Query: 295 DVF 297
+VF
Sbjct: 296 EVF 298
>emb|CAB93668.1| (AJ276653) RumF protein [Ruminococcus gnavus]
Length = 248
Score = 168 bits (420), Expect = 1e-40
Identities = 92/226 (40%), Positives = 136/226 (59%), Gaps = 5/226 (2%)
Query: 3 VIEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSVRL 62
+I E LTK Y F +V+ +SL ++KG I+GFLGPNGAGK+TT+ +LG+ P SGS ++
Sbjct: 4 IITTEKLTKKYKNFTSVNKVSLHIKKGSIYGFLGPNGAGKSTTMKMLLGLTAPTSGSFQI 63
Query: 63 LGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLKLV 122
G + + +R+G E + Y LT NLD +P + +E+ L LV
Sbjct: 64 DGKQFPNDRLTILKRIGSFIEAPSFYANLTGRENLDIIRRILGLP----QNAVEDALDLV 119
Query: 123 GLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQKK 182
GL R K +S GMKQRL LA AL+ P +LILDEPT+GLDP G ++++I
Sbjct: 120 GLSQFGDRLAKKYSLGMKQRLGLAGALLGRPPILILDEPTNGLDPSGIHEIRNLIKSLPT 179
Query: 183 -QGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYME 227
TV SSH+LSE+E +AD +GI+ G++ G+L+++K+ ++
Sbjct: 180 FYDCTVLISSHMLSEIELIADDIGILNHGRMLFEGSLDDLKQTALQ 225
>gb|AAG19009.1| (AE005000) daunorubicin resistance ABC transporter ATP-binding
protein; Trp3 [Halobacterium sp. NRC-1]
Length = 252
Score = 167 bits (419), Expect = 1e-40
Identities = 90/247 (36%), Positives = 139/247 (55%), Gaps = 8/247 (3%)
Query: 4 IEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSVRLL 63
I + LTK YG AVD+L L V G ++GFLGPNGAGKTTT+ + + P +G+ +
Sbjct: 6 IRADGLTKRYGDEAAVDDLDLAVPAGSVYGFLGPNGAGKTTTMRLLTSLTDPTAGTAEVA 65
Query: 64 GYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLKLVG 123
G + + R+G+LP + +++ELT W L A + + E + RIE LL+
Sbjct: 66 GVPV-TDRAALTPRIGYLPADPPVFDELTGWEQLRHVARLHGLDDGEADTRIESLLERFD 124
Query: 124 LWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQKKQ 183
L R+++S+S GM +++ + A+++DP++L LDEPTSGLDP+ AR V+D + +
Sbjct: 125 LLADADRRIESYSTGMTKKVGVVAAMLHDPDVLFLDEPTSGLDPRAARTVRDTVADLSAG 184
Query: 184 GKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQY-------MELEGYEIKVE 236
TV S+H+L V+ELAD +G+I G L G E +K +E E+ +
Sbjct: 185 DATVLLSTHVLPVVDELADTIGVIDDGVLVADGDPENLKSTAREGSAADLETVFMEVTAD 244
Query: 237 TKQPFPE 243
P P+
Sbjct: 245 ADAPLPD 251
>pir||S76278 ABC-type transport protein sll0759 - Synechocystis sp. (strain PCC
6803) >gi|1001505|dbj|BAA10130.1| (D64000) ABC
transporter [Synechocystis sp.]
Length = 347
Score = 167 bits (418), Expect = 2e-40
Identities = 97/306 (31%), Positives = 170/306 (54%), Gaps = 11/306 (3%)
Query: 4 IEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSVRLL 63
++++ L K YG AV ++S V +G IFG LGPNGAGKTTTI + + PD G + +
Sbjct: 11 VQVKQLRKKYGAIPAVKDISFAVPRGEIFGLLGPNGAGKTTTIRCLCTLAKPDGGELWID 70
Query: 64 GYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLKLVG 123
G ++ +P +A+ RLG++ + I + LT L AS Y++ +KRI++LL ++G
Sbjct: 71 GVNVLSDPRQARRRLGYVAQEVAIDKILTGRELLQLQASLYHLDAISSQKRIDQLLDILG 130
Query: 124 LWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQKKQ 183
L +K ++S G+K+RL LA L++ P +L+LDEP+ GLD + ++ + + + +
Sbjct: 131 LTAYADQKTGTYSGGLKKRLDLAAGLLHQPTVLVLDEPSVGLDIESRFILWEFLRQLRDA 190
Query: 184 GKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQY----MELEGYEIKVETKQ 239
G TV +SH L E++ LAD++ II +G + GT E+K + + L E + +
Sbjct: 191 GTTVVITSHYLEEIDALADRLAIIDQGTVIATGTPTELKDRVGGDRVTLRIKEFTADQEA 250
Query: 240 PFPEIELPDVIRIEKIADNK-------VLIFAKSDIREILSEELSKRGITVLSLEIEEPS 292
L + ++++ N+ +++ +S+ + + L G+ + SL PS
Sbjct: 251 EKASQILRSLAFVQEVIVNQAQGNSLNLVVTPQSNPLSQIEKALLADGLPIFSLAQSRPS 310
Query: 293 LEDVFL 298
L+DV+L
Sbjct: 311 LDDVYL 316
>pir||A70194 ABC transporter, ATP-binding protein homolog - Lyme disease
spirochete >gi|2688689|gb|AAC67099.1| (AE001175) ABC
transporter, ATP-binding protein [Borrelia burgdorferi]
Length = 309
Score = 167 bits (418), Expect = 2e-40
Identities = 101/304 (33%), Positives = 172/304 (56%), Gaps = 22/304 (7%)
Query: 3 VIEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSVRL 62
+I +E +TK YG F A+ N+S +VE+G + G LGPNGAGK+T I + P G+V++
Sbjct: 1 MINVEKVTKMYGPFTALFNVSFKVEEGEVLGILGPNGAGKSTLIKILTSFHYPSKGNVKI 60
Query: 63 LGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLKLV 122
G DI + + +++G++PE +Y EL+ L F + + K +KE I+ ++ +
Sbjct: 61 FGKDIVEHSKEILQQIGYVPEKLALYPELSVKEYLKFISEIKGVKKLKKE--IDRVISIF 118
Query: 123 GLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQKK 182
L +V + + SKG +QR+ +A ALIN+P+L+ILDEPT+GLDP K+ + E K
Sbjct: 119 KLKEVEDKLISQLSKGFRQRVGIAGALINNPKLVILDEPTNGLDPNQIIEFKEFLRELAK 178
Query: 183 QGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYEIKVETKQPFP 242
+ T+ FSSHILSEVE + ++ I+ G + T E I K ++ EI++E
Sbjct: 179 E-STILFSSHILSEVESICKRIIIVNNGVIVADDTKENIIKNKLK----EIEIE------ 227
Query: 243 EIELPDVIRIEKIADNKVLIF-AKSDIREILSEELSKRGITVLSLEIEEPSLEDVFLKTI 301
+ + K ++N+ IF +K+DI ++ E ++ + + SL++ + E+ I
Sbjct: 228 -------LIVSKKSENEKKIFNSKNDIFSLIKLEEHEKDLNI-SLKLSQGKTEEDLFSYI 279
Query: 302 YRRD 305
+ +
Sbjct: 280 VKNN 283
>pir||T36344 probable ABC-type transport system ATP-binding protein -
Streptomyces coelicolor >gi|4808357|emb|CAB42771.1|
(AL049841) putative ABC transporter ATP-binding
component [Streptomyces coelicolor A3(2)]
Length = 315
Score = 167 bits (418), Expect = 2e-40
Identities = 98/298 (32%), Positives = 159/298 (52%), Gaps = 3/298 (1%)
Query: 4 IEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSVRLL 63
I +E K YG A+D L L V +G + G LGPNGAGKTT + + ++ PD+G V +
Sbjct: 8 ITVEGARKEYGSKSALDGLDLTVTRGTVHGVLGPNGAGKTTLVRILSTLLRPDAGRVEVA 67
Query: 64 GYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLKLVG 123
G+D+ E + R+G L ++A + EEL +NL+ F +++ + R +ELL G
Sbjct: 68 GHDVVAEAYAVRLRIGLLGQHAALDEELGGRQNLEMFGRLHHLGARGARARADELLVRFG 127
Query: 124 LWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQKKQ 183
L D + V ++S GM++RL LA +LI +PE+L LDEPT+GLDP+G V D +
Sbjct: 128 LSDTGRKPVGAYSGGMRRRLDLAASLITEPEVLFLDEPTTGLDPRGRAEVWDSVRSLVGA 187
Query: 184 GKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYEIKVETKQPFPE 243
G TV ++ L E ++LAD++ ++ G++ GT +E+K + +
Sbjct: 188 GTTVLLTTQYLEEADQLADRISVVDAGRVVADGTADELKAATGGDRVDVVLRDAGHLGAA 247
Query: 244 IELPDVIRIEKIADNKVLIFAKSDIREILS---EELSKRGITVLSLEIEEPSLEDVFL 298
+ L + + D ++L +D LS L + GI + + P+L++VFL
Sbjct: 248 VALLPLTGVRVDPDRRLLSAPVTDRMAALSGVVRALEEAGIEAEDVALRRPTLDEVFL 305
>pir||B64816 ABC-type transport protein ybhF - Escherichia coli
>gi|1787012|gb|AAC73881.1| (AE000181) putative
ATP-binding component of a transport system [Escherichia
coli K12] >gi|4062352|dbj|BAA35454.1| (D90716) ATP
binding cassette transporter ABC2 [Escherichia coli]
Length = 583
Score = 166 bits (417), Expect = 2e-40
Identities = 88/243 (36%), Positives = 141/243 (57%), Gaps = 10/243 (4%)
Query: 3 VIEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSVRL 62
VIE + LTK +G F A D+++ V++G IFG LGPNGAGK+TT M G+++P SG +
Sbjct: 334 VIEAKELTKKFGDFAATDHVNFAVKRGEIFGLLGPNGAGKSTTFKMMCGLLVPTSGQALV 393
Query: 63 LGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLKLV 122
LG D+ + KA++ LG++ + ++Y LT +NL FF+ Y + + + ++I + +
Sbjct: 394 LGMDLKESSGKARQHLGYMAQKFSLYGNLTVEQNLRFFSGVYGLRGRAQNEKISRMSEAF 453
Query: 123 GLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQKK 182
GL + G KQRL LA +L+++P++L LDEPTSG+DP R I +
Sbjct: 454 GLKSIASHATDELPLGFKQRLALACSLMHEPDILFLDEPTSGVDPLTRREFWLHINSMVE 513
Query: 183 QGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYEIKVETKQPFP 242
+G TV ++H + E E D++G++ +GKL GT +++K Q +QP P
Sbjct: 514 KGVTVMVTTHFMDEA-EYCDRIGLVYRGKLIASGTPDDLKAQ---------SANDEQPDP 563
Query: 243 EIE 245
+E
Sbjct: 564 TME 566
Score = 124 bits (309), Expect = 1e-27
Identities = 89/304 (29%), Positives = 153/304 (50%), Gaps = 15/304 (4%)
Query: 3 VIEIENLTKSY-GKFK-AVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSV 60
VI + L K + G K AV L + G + G +GP+GAGKTT + + G++ PDSGS
Sbjct: 10 VITLNGLEKRFPGMDKPAVAPLDCTIHAGYVTGLVGPDGAGKTTLMRMLAGLLKPDSGSA 69
Query: 61 RLLGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLK 120
++G+D K LG++P+ +YE+LT NL+ +A ++ + +++ LL+
Sbjct: 70 TVIGFDPIKNDGALHAVLGYMPQKFGLYEDLTVMENLNLYADLRSVTGEARKQTFARLLE 129
Query: 121 LVGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQ 180
L R S GMKQ+L LA L+ +P++L+LDEP G+DP R + ++ E
Sbjct: 130 FTSLGPFTGRLAGKLSGGMKQKLGLACTLVGEPKVLLLDEPGVGVDPISRRELWQMVHEL 189
Query: 181 KKQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYEIKVETKQP 240
+G + +S+ L E E+ D V ++ +G+L G E K + G + +
Sbjct: 190 AGEGMLILWSTSYLDEAEQCRD-VLLMNEGELLYQG---EPKALTQTMAGRSFLMTSPHE 245
Query: 241 FPEIELPDVIRIEKIADNKVLIFAKSDIREILSEELS------KRGITVLSLEIEEPSLE 294
L +++ +++D +I KS +R IL +E + G+ +++ P E
Sbjct: 246 GNRKLLQRALKLPQVSDG--MIQGKS-VRLILKKEATPDDIRHADGMPEININETTPRFE 302
Query: 295 DVFL 298
D F+
Sbjct: 303 DAFI 306
>sp|P75776|YBHF_ECOLI HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PROTEIN YBHF
Length = 578
Score = 166 bits (417), Expect = 2e-40
Identities = 88/243 (36%), Positives = 141/243 (57%), Gaps = 10/243 (4%)
Query: 3 VIEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSVRL 62
VIE + LTK +G F A D+++ V++G IFG LGPNGAGK+TT M G+++P SG +
Sbjct: 329 VIEAKELTKKFGDFAATDHVNFAVKRGEIFGLLGPNGAGKSTTFKMMCGLLVPTSGQALV 388
Query: 63 LGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLKLV 122
LG D+ + KA++ LG++ + ++Y LT +NL FF+ Y + + + ++I + +
Sbjct: 389 LGMDLKESSGKARQHLGYMAQKFSLYGNLTVEQNLRFFSGVYGLRGRAQNEKISRMSEAF 448
Query: 123 GLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQKK 182
GL + G KQRL LA +L+++P++L LDEPTSG+DP R I +
Sbjct: 449 GLKSIASHATDELPLGFKQRLALACSLMHEPDILFLDEPTSGVDPLTRREFWLHINSMVE 508
Query: 183 QGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYEIKVETKQPFP 242
+G TV ++H + E E D++G++ +GKL GT +++K Q +QP P
Sbjct: 509 KGVTVMVTTHFMDEA-EYCDRIGLVYRGKLIASGTPDDLKAQ---------SANDEQPDP 558
Query: 243 EIE 245
+E
Sbjct: 559 TME 561
Score = 124 bits (309), Expect = 1e-27
Identities = 89/304 (29%), Positives = 153/304 (50%), Gaps = 15/304 (4%)
Query: 3 VIEIENLTKSY-GKFK-AVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSV 60
VI + L K + G K AV L + G + G +GP+GAGKTT + + G++ PDSGS
Sbjct: 5 VITLNGLEKRFPGMDKPAVAPLDCTIHAGYVTGLVGPDGAGKTTLMRMLAGLLKPDSGSA 64
Query: 61 RLLGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLK 120
++G+D K LG++P+ +YE+LT NL+ +A ++ + +++ LL+
Sbjct: 65 TVIGFDPIKNDGALHAVLGYMPQKFGLYEDLTVMENLNLYADLRSVTGEARKQTFARLLE 124
Query: 121 LVGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQ 180
L R S GMKQ+L LA L+ +P++L+LDEP G+DP R + ++ E
Sbjct: 125 FTSLGPFTGRLAGKLSGGMKQKLGLACTLVGEPKVLLLDEPGVGVDPISRRELWQMVHEL 184
Query: 181 KKQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYEIKVETKQP 240
+G + +S+ L E E+ D V ++ +G+L G E K + G + +
Sbjct: 185 AGEGMLILWSTSYLDEAEQCRD-VLLMNEGELLYQG---EPKALTQTMAGRSFLMTSPHE 240
Query: 241 FPEIELPDVIRIEKIADNKVLIFAKSDIREILSEELS------KRGITVLSLEIEEPSLE 294
L +++ +++D +I KS +R IL +E + G+ +++ P E
Sbjct: 241 GNRKLLQRALKLPQVSDG--MIQGKS-VRLILKKEATPDDIRHADGMPEININETTPRFE 297
Query: 295 DVFL 298
D F+
Sbjct: 298 DAFI 301
>sp|P32010|DRRA_STRPE DAUNORUBICIN RESISTANCE ATP-BINDING PROTEIN DRRA
>gi|625935|pir||S27707 daunorubicin resistance protein -
Streptomyces peucetius >gi|153230|gb|AAA74717.1|
(M73758) daunorubicin resistance protein [Streptomyces
peucetius]
Length = 330
Score = 166 bits (416), Expect = 3e-40
Identities = 102/305 (33%), Positives = 161/305 (52%), Gaps = 11/305 (3%)
Query: 2 KVIEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSVR 61
+ IE L K Y +AVD L L V G+++G LGPNGAGK+TTI + ++ PD G+ R
Sbjct: 7 RAIETSGLVKVYNGTRAVDGLDLNVPAGLVYGILGPNGAGKSTTIRMLATLLRPDGGTAR 66
Query: 62 LLGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLKL 121
+ G+D+ EP + R+ + A++ E LT NL +R EL+
Sbjct: 67 VFGHDVTSEPDTVRRRISVTGQYASVDEGLTGTENLVMMGRLQGYSWARARERAAELIDG 126
Query: 122 VGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQK 181
GL D R R +K++S GM++RL +A +++ P+LL LDEPT+GLDP+ V DI+
Sbjct: 127 FGLGDARDRLLKTYSGGMRRRLDIAASIVVTPDLLFLDEPTTGLDPRSRNQVWDIVRALV 186
Query: 182 KQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQY------MELEGYEIKV 235
G TV ++ L E ++LAD++ +I G++ GT E+K + L + +
Sbjct: 187 DAGTTVLLTTQYLDEADQLADRIAVIDHGRVIAEGTTGELKSSLGSNVLRLRLHDAQSRA 246
Query: 236 ETKQPFPEIELPDVIRIEKIADNKVLIFAKSDIREILS--EELSKRGITVLSLEIEEPSL 293
E ++ EL + I + +D L D R+ + ELS+ + V S + + SL
Sbjct: 247 EAER-LLSAELG--VTIHRDSDPTALSARIDDPRQGMRALAELSRTHLEVRSFSLGQSSL 303
Query: 294 EDVFL 298
++VFL
Sbjct: 304 DEVFL 308
>pir||B71030 probable ATP-binding transport protein - Pyrococcus horikoshii
>gi|3257959|dbj|BAA30642.1| (AP000006) 226aa long
hypothetical ATP-binding transport protein [Pyrococcus
horikoshii]
Length = 226
Score = 166 bits (416), Expect = 3e-40
Identities = 87/209 (41%), Positives = 132/209 (62%)
Query: 17 KAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSVRLLGYDIFKEPIKAKE 76
KA+ ++ +E+G IFG +GPNGAGK+TT+ + ++ P G + G+D+ KE + ++
Sbjct: 2 KALRGITFSIEEGEIFGLIGPNGAGKSTTLKILATLLRPTGGKAEVFGFDVVKEADEVRK 61
Query: 77 RLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLKLVGLWDVRYRKVKSFS 136
+ +LPE A Y+ LT L F A Y ++ EK ++ ++L GL D K+ ++S
Sbjct: 62 LISYLPEEAGAYKRLTGLEYLKFMAKLYAKDSRKAEKMLKLGIELSGLGDRLRDKISTYS 121
Query: 137 KGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQKKQGKTVFFSSHILSE 196
KGM +RLLLA+AL+ P+L ILDEPTSGLD A ++ II E K+G T SSH + E
Sbjct: 122 KGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRIIREFSKEGVTFLISSHNMLE 181
Query: 197 VEELADKVGIIVKGKLRTVGTLEEIKKQY 225
VE L D+V +I KGK+ VG+ E+K+++
Sbjct: 182 VEYLCDRVALIHKGKIVEVGSPHELKEKH 210
>emb|CAB94566.1| (AL359152) putative ABC transporter ATP-binding subunit
[Streptomyces coelicolor A3(2)]
Length = 346
Score = 166 bits (416), Expect = 3e-40
Identities = 104/299 (34%), Positives = 165/299 (54%), Gaps = 12/299 (4%)
Query: 3 VIEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSVRL 62
+IE+E LTK YG+ AV+NLS V GII GFLGPNGAGK+TT+ +LG+ P +G VR+
Sbjct: 17 MIELEGLTKRYGEKVAVNNLSFTVRPGIITGFLGPNGAGKSTTMRMVLGLDRPTAGDVRI 76
Query: 63 LG--YDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLK 120
G YD K+P+ +G L E + +A+ +L A IP R+ ++L
Sbjct: 77 DGKHYDELKDPLTY---IGALLEAKAWHGGRSAYNHLLCLAQSNGIPAS----RVRQVLD 129
Query: 121 LVGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQ 180
VGL V +K K FS GM QRL +A AL+ DP +L+ DEP +GLDP+G +++++
Sbjct: 130 TVGLSAVARKKTKGFSLGMGQRLGIAGALLGDPRILMFDEPVNGLDPEGIHWIRNLMKTL 189
Query: 181 KKQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYEIKVETKQP 240
QG+TVF SSH++SE+ AD + +I +G+L ++ E E +++ T Q
Sbjct: 190 ASQGRTVFVSSHLMSEMALTADHLVVIGQGRLLADTSMAEF---IAENSRSYVRIRTPQR 246
Query: 241 FPEIELPDVIRIEKIADNKVLIFAKSDIREILSEELSKRGITVLSLEIEEPSLEDVFLK 299
++ + + + ++ D E + E ++ + + L + SLE+ F++
Sbjct: 247 EQLLDALHAAGVTVVESGEGVLEVDGDKSETVGELAARHQVVLYELSPQRASLEEAFMQ 305
>pir||B75076 daunorubicin resistance ATP-binding protein drra PAB1703 -
Pyrococcus abyssi (strain Orsay)
>gi|5458423|emb|CAB49911.1| (AJ248286) DAUNORUBICIN
RESISTANCE ATP-BINDING PROTEIN DRRA [Pyrococcus abyssi]
Length = 314
Score = 165 bits (414), Expect = 5e-40
Identities = 100/318 (31%), Positives = 183/318 (57%), Gaps = 19/318 (5%)
Query: 1 MKVIEIENLTKSY----GKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPD 56
M ++E++++TK + G+ AV+N+S G + G LGPNGAGKTTT+ + I PD
Sbjct: 1 MPILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPD 60
Query: 57 SGSVRLLGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIE 116
SG V + G D K P++ ++R+ ++ + + L+ + ++ F K++ +K E
Sbjct: 61 SGEVLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCE 120
Query: 117 ELLKLVGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDI 176
++L+L GL ++K S G+K+R+ LA AL +D L+ LDEPT+G+DP+ R ++
Sbjct: 121 DILELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWEL 180
Query: 177 ILEQ-KKQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYEIKV 235
I E+ + +G TV +SH L EVE LAD+V I+ +GK+ G+ +E+KK++ G +++
Sbjct: 181 IKEKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRF----GKTVRI 236
Query: 236 ETKQPFPEIEL--PDVIRIEKIADNKVL------IFAKS--DIREILSEELSKRGITVLS 285
++P EL +++R++ + D ++ ++ KS D + + +S + + +
Sbjct: 237 VLEEPIKNFELLKEELLRVKNVKDVRLARDDSFDVYFKSLDDSINGILQVISPQELKIKD 296
Query: 286 LEIEEPSLEDVFLKTIYR 303
+ + EDV+L+ I R
Sbjct: 297 IFTATANFEDVYLEIIER 314
>pir||I40516 spaF protein - Bacillus subtilis
Length = 456
Score = 164 bits (412), Expect = 9e-40
Identities = 93/229 (40%), Positives = 144/229 (62%), Gaps = 10/229 (4%)
Query: 3 VIEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSVRL 62
++E ++LTK +GK AV ++SL V+K I+G LGPNGAGK+TT+ + GI+ SG +
Sbjct: 14 LLETKSLTKKFGKETAVADVSLTVQKNSIYGLLGPNGAGKSTTLKILTGILRKTSGEILF 73
Query: 63 LGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLKLV 122
G+ + ++ +G L E +Y+ LTA+ N+ A+ + E RI +LK V
Sbjct: 74 DGHKWKRSDLQT---IGSLIEAPPLYDNLTAFENVKVHATLLGL----SEDRIHSVLKTV 126
Query: 123 GLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQKK 182
+ ++ FS GM+QRL +A AL+N P+LLILDEPT+GLDP G + ++D+I +
Sbjct: 127 DMQHAGKKRAGQFSMGMRQRLGIAIALLNHPKLLILDEPTNGLDPIGIQELRDLIRSFPQ 186
Query: 183 QGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTL---EEIKKQYMEL 228
+G TV SSHILSEVE++AD +GII+ G L G + ++++ +ME+
Sbjct: 187 EGITVILSSHILSEVEQIADHIGIIIDGHLGYQGEINKADDLEHLFMEV 235
>gb|AAB91597.1| (U09819) SpaF [Bacillus subtilis]
Length = 247
Score = 164 bits (412), Expect = 9e-40
Identities = 93/229 (40%), Positives = 144/229 (62%), Gaps = 10/229 (4%)
Query: 3 VIEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSVRL 62
++E ++LTK +GK AV ++SL V+K I+G LGPNGAGK+TT+ + GI+ SG +
Sbjct: 14 LLETKSLTKKFGKETAVADVSLTVQKNSIYGLLGPNGAGKSTTLKILTGILRKTSGEILF 73
Query: 63 LGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLKLV 122
G+ + ++ +G L E +Y+ LTA+ N+ A+ + E RI +LK V
Sbjct: 74 DGHKWKRSDLQT---IGSLIEAPPLYDNLTAFENVKVHATLLGL----SEDRIHSVLKTV 126
Query: 123 GLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQKK 182
+ ++ FS GM+QRL +A AL+N P+LLILDEPT+GLDP G + ++D+I +
Sbjct: 127 DMQHAGKKRAGQFSMGMRQRLGIAIALLNHPKLLILDEPTNGLDPIGIQELRDLIRSFPQ 186
Query: 183 QGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTL---EEIKKQYMEL 228
+G TV SSHILSEVE++AD +GII+ G L G + ++++ +ME+
Sbjct: 187 EGITVILSSHILSEVEQIADHIGIIIDGHLGYQGEINKADDLEHLFMEV 235
>pir||H72269 ABC transporter, ATP-binding protein - Thermotoga maritima (strain
MSB8) >gi|4981861|gb|AAD36376.1|AE001785_7 (AE001785)
ABC transporter, ATP-binding protein [Thermotoga
maritima]
Length = 258
Score = 164 bits (412), Expect = 9e-40
Identities = 83/233 (35%), Positives = 147/233 (62%), Gaps = 4/233 (1%)
Query: 2 KVIEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSVR 61
KV+E+ + KS+G+ + +D + E+G +G NG+GK+T + M+G+++PD G V+
Sbjct: 3 KVVEVSGVRKSFGELRVLDKVDFYAEEGDFKVIVGENGSGKSTLLKIMIGLLLPDDGEVK 62
Query: 62 LLGYDIFKEPIKAKERLGFLPENA-TIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLK 120
+LG D+ K K R+G + N ++Y +LTAW NLD F Y +PK+ + +R+EELLK
Sbjct: 63 VLGVDVKKHWKKLSARIGVVLANERSLYWKLTAWENLDIFGGVYGVPKKVRRERMEELLK 122
Query: 121 LVGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQ 180
GL++ + + V+ FS GM+++L++ +ALI+DPE+L +DE +GLDP R + + E+
Sbjct: 123 RFGLFEYKDKPVEEFSTGMRKKLMICKALIHDPEVLFIDEILNGLDPPSVREMVGFLDER 182
Query: 181 KKQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYEI 233
++G T+ SH+L + E A V ++ G+++ ++I+ + E+ YE+
Sbjct: 183 NRRGLTIVMISHVLHVLPENACVV-LLRNGRVQMEVRYKDIRSERSEV--YEV 232
>gb|AAD16030.1| (AF082183) ABC transporter MutF [Streptococcus mutans]
Length = 302
Score = 164 bits (410), Expect = 2e-39
Identities = 104/301 (34%), Positives = 167/301 (54%), Gaps = 13/301 (4%)
Query: 3 VIEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSVRL 62
++ I NL+KS+G K +D+L++ + G I+GFLG NGAGK+T + +LG++ DSG +
Sbjct: 5 LLSINNLSKSFGNQKVLDHLNMTISPGEIYGFLGVNGAGKSTAMKIILGLLPKDSGEIVA 64
Query: 63 LGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLKLV 122
LG + + + +G L E Y LT + NL N+PK I+ +++
Sbjct: 65 LGRPLPENRSQILPEIGALIEEPAFYPNLTGFENLQLIQELANLPKD----NIKVVMEAT 120
Query: 123 GLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILE-QK 181
G++ + + V+++S GMKQRL ++ ALI P+ LILDEPT+GLDP G ++ +I +
Sbjct: 121 GIYYAKDKLVRNYSLGMKQRLGISMALIKFPKFLILDEPTNGLDPDGIHQMRQLIRSLPQ 180
Query: 182 KQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYEIKVETKQPF 241
K T+ SSHILSE+E LAD VGII G L G + ++ Q + Y++KV +
Sbjct: 181 KFNMTILISSHILSEIENLADTVGIIKDGHLIYEGGINQLLNQEQK---YQLKVNNLEKA 237
Query: 242 PEI--ELPDVIRIEKIADNKVLIFAKSDIREI--LSEELSKRGITVLSLEIEEPSLEDVF 297
+I + I I K D+ +L+ + D + L +L + + + + +LE VF
Sbjct: 238 AQIIQHYDNKIGIVK-NDDDILLISLPDCTLVPDLIAQLVYNELQIYEIYGVKKTLESVF 296
Query: 298 L 298
L
Sbjct: 297 L 297
>emb|CAB76006.1| (AL157916) putative ABC transporter, ATP-binding subunit
[Streptomyces coelicolor A3(2)]
Length = 312
Score = 164 bits (410), Expect = 2e-39
Identities = 101/301 (33%), Positives = 162/301 (53%), Gaps = 11/301 (3%)
Query: 1 MKVIEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSV 60
M VIE+ +L KSYG VD +S VE+G IFG LGPNGAGKTTT+ + G+ +PD+G V
Sbjct: 13 MPVIEVTDLRKSYGGRPVVDGVSFAVEEGEIFGVLGPNGAGKTTTVECVEGLRVPDAGRV 72
Query: 61 RLLGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLK 120
R+ G D + + E LG + + + +LT L+ +A+FY PK + + E L
Sbjct: 73 RVTGLDPVADHRRVAEVLGAQLQQSELQPKLTVREALELYAAFY--PKPADWRPLAERLD 130
Query: 121 LVGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQ 180
LV + D R+ K+ S G KQRL +A AL+ DP +++LDE T+GLDP+ R +I +
Sbjct: 131 LVPMLDTRFAKL---SGGQKQRLFIALALVGDPRVVVLDELTTGLDPRARRETWQLIEDI 187
Query: 181 KKQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYEIKVETKQP 240
+ G TV +H + E + L D++ +I +G++ + T + ++ I P
Sbjct: 188 RAGGVTVLLVTHFMEEAQRLCDRIAVIDRGRIAALDTPAGLIRR--STGATVISFTPSAP 245
Query: 241 FPEIE---LPDVIRIEKIADNKVLIFAKSDIREILSEELSKRGITVLSLEIEEPSLEDVF 297
E + LP++ E D +V + + + L++ +T L + + +L+D F
Sbjct: 246 LDEADLRALPELASAE-FRDGRVTLSGTDETVNAVITLLARTRVTAHQLRVTDTTLDDAF 304
Query: 298 L 298
L
Sbjct: 305 L 305
>dbj|BAB08166.1| (AB030831) SrtF [Streptococcus pyogenes]
Length = 229
Score = 164 bits (410), Expect = 2e-39
Identities = 87/210 (41%), Positives = 135/210 (63%), Gaps = 7/210 (3%)
Query: 3 VIEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSVRL 62
+++I+NL KSYGK ++N+++ + KG ++ +GPNGAGK+T + + G++ SGS+
Sbjct: 1 MLKIQNLKKSYGKRTILNNVNMNIPKGKVYALIGPNGAGKSTIMKILTGLVSKTSGSIIF 60
Query: 63 LGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLKLV 122
G + + ++ ++G + E +Y+ L+A+ N+ + + E I LL V
Sbjct: 61 EGREWSRRDLR---KIGSIIEEPPLYKNLSAYDNMKVVTTMLGV----SESTILPLLNKV 113
Query: 123 GLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQKK 182
GL ++ R VK FS GMKQRL +A +LIN P+LLILDEPT+GLDP G + +++II K
Sbjct: 114 GLGNIDKRPVKQFSLGMKQRLGIAISLINSPKLLILDEPTNGLDPIGIQELREIIESFKS 173
Query: 183 QGKTVFFSSHILSEVEELADKVGIIVKGKL 212
+G T+ SSHILSEVE LAD +G I +GK+
Sbjct: 174 EGMTIMISSHILSEVEHLADFIGFIYEGKI 203
>dbj|BAB04009.1| (AP001508) ABC transporter (ATP-binding protein) [Bacillus
halodurans]
Length = 301
Score = 163 bits (409), Expect = 2e-39
Identities = 100/301 (33%), Positives = 166/301 (54%), Gaps = 8/301 (2%)
Query: 4 IEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSVRLL 63
+EI+++TK Y + AV + S+++ G G +GPNGAGKTT I + I+ P G + L
Sbjct: 3 LEIKSVTKKYKEKTAVHDFSMDLLSGECVGLIGPNGAGKTTLIKMITNILDPTRGDILLN 62
Query: 64 GYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLKLVG 123
G K + K +G+LP+ Y+ +TA L F I K++ K I E+L VG
Sbjct: 63 G----KRISEMKREIGYLPQYPDFYQWMTASETLLFMGQLSGISKKKLTKSIPEILSKVG 118
Query: 124 LWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQKKQ 183
L KV +FS GMKQRL +AQAL++ P +++DEP S LDP G R V +II E+ K+
Sbjct: 119 LRGEENSKVSTFSGGMKQRLGIAQALLHKPSFIVMDEPVSALDPIGRREVLNII-EEIKK 177
Query: 184 GKTVFFSSHILSEVEELADKVGIIVKG-KLRTVGTLEEIKKQYMELEGYEIKVETKQPFP 242
T+ S+HIL++ EE+ +++ +I G K+ +E + + EI E+K
Sbjct: 178 DSTILLSTHILADAEEICERLVMIKNGEKIEDTTMMELLNRNSKNKIRVEITDESKDWIE 237
Query: 243 EIELPDVIRIEKIADNKVLIFAKSD--IREILSEELSKRGITVLSLEIEEPSLEDVFLKT 300
++ + ++ ++ NKV + K+ + +L K + ++ E++ +LE++FLK
Sbjct: 238 VVKKLNYVQDVEVTGNKVNVEVKNIELHKNMLLANALKHDVNIVKFELDHDTLEELFLKL 297
Query: 301 I 301
+
Sbjct: 298 V 298
>sp|Q58429|YA23_METJA HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PROTEIN MJ1023
>gi|2127730|pir||F64427 ABC transporter ATP-binding
protein - Methanococcus jannaschii
>gi|1499865|gb|AAB99027.1| (U67545) ABC transporter
ATP-binding protein [Methanococcus jannaschii]
Length = 262
Score = 162 bits (407), Expect = 3e-39
Identities = 97/258 (37%), Positives = 148/258 (56%), Gaps = 20/258 (7%)
Query: 4 IEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSVRLL 63
I++ENLTK +G K +D +S EV +G IFG LG NGAGKTTT+ + GII +G V +
Sbjct: 5 IKVENLTKYFGDKKVLDEISFEVYEGEIFGLLGHNGAGKTTTLRILAGIIEEYTGYVEVN 64
Query: 64 GYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLKLVG 123
G ++G+LPE +Y + L FF + K+E K I+ L +
Sbjct: 65 G------------KIGYLPEERGLYRDEKVVDVLKFFGELAGMKKEEIAKSIDYWLNKLK 112
Query: 124 LWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQKKQ 183
+ + +Y K+K SKG +Q++ ++I++P+++ILDEP SGLD RL++DII E K++
Sbjct: 113 ISNYKYSKIKELSKGNQQKVQFIVSVIHNPDIVILDEPFSGLDVVNVRLLRDIIFELKEE 172
Query: 184 GKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEI--KKQYMELEGYEIKVETKQPF 241
GKT+ S+H L ++E L D+V I+ KGK G +E+I K Y+E ++ + P+
Sbjct: 173 GKTIILSTHQLEKIERLCDRVLILKKGKAVHYGKIEDICRKMAYIEYLDNGKLIKKEIPY 232
Query: 242 PEIEL------PDVIRIE 253
E L DVI+ E
Sbjct: 233 EEAVLILKEKAEDVIKFE 250
>emb|CAC11214.1| (AL445063) gliding motility protein (gldA) related protein
[Thermoplasma acidophilum]
Length = 260
Score = 162 bits (407), Expect = 3e-39
Identities = 81/245 (33%), Positives = 144/245 (58%), Gaps = 4/245 (1%)
Query: 4 IEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSVRLL 63
I+I+N++ YG+ A+D ++L++ +G I+G LGPNG+GKTT + +LG++ +GS +
Sbjct: 6 IKIDNVSMRYGEKLALDGVTLDIPEGTIYGILGPNGSGKTTLMRIILGLLKQTAGSAIVC 65
Query: 64 GYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLKLVG 123
GYD ++ +K KE G++PE +YE +T F AS + + +R++ L+ G
Sbjct: 66 GYDSTRDQMKIKEISGYVPETPILYESMTPSELFSFIASIRRMDEGTFRRRVDALIDAFG 125
Query: 124 LWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQKKQ 183
+ + + S S G +Q++ + A+++DP++LI+DE +GLDP+ A+L K I+ + +
Sbjct: 126 IAEYINEFIGSLSFGNRQKVAIISAILHDPKILIVDEGINGLDPRSAKLFKSILTDMRDH 185
Query: 184 GKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQ----YMELEGYEIKVETKQ 239
GK + FS+HIL E L D V I+ G + GT+ +++ + LE +K+
Sbjct: 186 GKIIVFSTHILEIAESLCDHVAILYNGHIVANGTIADLRNEANAPSQNLEEIFLKLTNAD 245
Query: 240 PFPEI 244
PE+
Sbjct: 246 DIPEV 250
>sp|P36879|YADG_ECOLI HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PROTEIN YADG
>gi|628771|pir||S45204 probable ABC-type transport
protein yagD - Escherichia coli
>gi|473794|dbj|BAA05583.1| (D26562) 'ORF' [Escherichia
coli] >gi|1786319|gb|AAC73238.1| (AE000122) putative
ATP-binding component of a transport system [Escherichia
coli K12]
Length = 308
Score = 162 bits (406), Expect = 4e-39
Identities = 95/299 (31%), Positives = 173/299 (57%), Gaps = 4/299 (1%)
Query: 4 IEIENLTKSY-GKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSVRL 62
+E++ L K+Y G +A+ + L+VE G + LGPNGAGK+TTI + ++ SG V +
Sbjct: 5 LELQQLKKTYPGGVQALRGIDLQVEAGDFYALLGPNGAGKSTTIGIISSLVNKTSGRVSV 64
Query: 63 LGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLKLV 122
GYD+ K+ + AK +LG +P+ T + + A +Y + ++E R E+ LK +
Sbjct: 65 FGYDLEKDVVNAKRQLGLVPQEFNFNPFETVQQIVVNQAGYYGVERKEAYIRSEKYLKQL 124
Query: 123 GLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQKK 182
LW R + + S GMK+RL++A+AL+++P+LLILDEPT+G+D + R + + +
Sbjct: 125 DLWGKRNERARMLSGGMKRRLMIARALMHEPKLLILDEPTAGVDIELRRSMWGFLKDLND 184
Query: 183 QGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYEIKVETKQPFP 242
+G T+ ++H L E E L +GII G+L +++ + + ++ E + + + K P P
Sbjct: 185 KGTTIILTTHYLEEAEMLCRNIGIIQHGELVENTSMKALLAK-LKSETFILDLAPKSPLP 243
Query: 243 EIELPDVIRIEKIADNKVLIFAKSDIREILSEELSKRGITVLSLEIEEPSLEDVFLKTI 301
+++ R+ A +V + + I + + +LS++GI VLS+ + LE++F+ +
Sbjct: 244 KLD-GYQYRLVDTATLEVEVLREQGINSVFT-QLSEQGIQVLSMRNKANRLEELFVSLV 300
>sp|P72335|NODI_RHIS3 NODULATION ATP-BINDING PROTEIN I >gi|1531621|gb|AAB16898.1|
(U53327) NodI [Rhizobium sp. N33]
Length = 304
Score = 162 bits (406), Expect = 4e-39
Identities = 94/296 (31%), Positives = 160/296 (53%), Gaps = 5/296 (1%)
Query: 4 IEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSVRLL 63
I++ + KS+G V+ LS V G FG LGPNGAGK+T +LG+ +PD+G + +L
Sbjct: 6 IDLAGVKKSFGDKLVVNGLSFTVASGECFGLLGPNGAGKSTIARMLLGMTVPDAGKITVL 65
Query: 64 GYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLKLVG 123
G + A++ +G +P+ + +E T NL F ++ + ++ ++ I LL+
Sbjct: 66 GEPVGARSRLARKSIGVVPQFDNLDQEFTVRENLLVFGRYFGMSTRKIKEVIPSLLEFAR 125
Query: 124 LWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQKKQ 183
L +V S GMK+RL LA+ALINDP+LL++DEPT+GLDP L+ + + +
Sbjct: 126 LESKADARVGELSGGMKRRLTLARALINDPQLLVMDEPTTGLDPHARHLIWERLRFLLAR 185
Query: 184 GKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYEIKVETKQPFPE 243
GKT+ ++H + E E L D++ ++ G+ G+ + ++++ + EI Q
Sbjct: 186 GKTIILTTHFMEEAERLCDRLCVLEHGRKLAEGSPHALIEEHIGCQVIEIFGGNPQELVS 245
Query: 244 IELPDVIRIEKIADNKVLIFAKSDIREILSEELSKRGITVLSLEIEEPSLEDVFLK 299
+ P V R+E + L +D ++ + + G+ +L PSLEDVFL+
Sbjct: 246 LIRPYVQRVE--VSGETLFCYTADPEQVRVQLRGRAGLRLLE---RPPSLEDVFLR 296
>pir||F72742 probable transport ATP-binding protein APE0471 - Aeropyrum pernix
(strain K1) >gi|5104118|dbj|BAA79434.1| (AP000059) 356aa
long hypothetical transport ATP-binding protein
[Aeropyrum pernix]
Length = 356
Score = 162 bits (405), Expect = 6e-39
Identities = 100/298 (33%), Positives = 160/298 (53%), Gaps = 13/298 (4%)
Query: 3 VIEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSVRL 62
VIE+E L K YG +A+ +S V G +FG+LGPNGAGKTTTI ++G P SGS R+
Sbjct: 57 VIEVEGLVKRYGSVEALRGVSFSVLSGEVFGYLGPNGAGKTTTIRVLMGFSRPTSGSARV 116
Query: 63 LGYDIFKEPIKA-KERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLKL 121
G +++ + R+G++P Y ++ R LD++ + + + E L
Sbjct: 117 FGVELYNPGASGVRRRVGYVPGEFEFYGGVSGGRMLDYWCRLVGGCSRGVVRELLEAFPL 176
Query: 122 VGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQK 181
R V ++S+GMKQ L L A ++P+L+++DEPT+GLDP V D + +
Sbjct: 177 P-----LERAVGTYSRGMKQMLALVMAFSHEPDLVVMDEPTTGLDPLARGRVLDFVRSKA 231
Query: 182 KQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYEIKVE-TKQP 240
++G TVFFSSH+LSEV+ +AD+VG++ G L LE++ + G +K +K
Sbjct: 232 REGVTVFFSSHVLSEVQRVADRVGLLRSGVL---VALEDV-SSLLRKSGKVVKARVSKNL 287
Query: 241 FPEIELPDVIRIEKIADNKVLIFAKSDIREILSEELSKRGITVLSLEIEEPSLEDVFL 298
P+ D +R+ + L+ E + L G+ LE+ + +LE+VF+
Sbjct: 288 SPDRLAVDGVRVIRSNGELELVVTSGKALESVLRMLLDAGLE--DLEVRDATLEEVFM 343
>pir||T29454 ABC transport protein - Streptomyces coelicolor
>gi|3367766|emb|CAA20091.1| (AL031155) ABC transporter
ATP-binding protein [Streptomyces coelicolor A3(2)]
Length = 312
Score = 161 bits (404), Expect = 8e-39
Identities = 105/299 (35%), Positives = 171/299 (57%), Gaps = 13/299 (4%)
Query: 3 VIEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSVRL 62
+IE LTK YG+ AVD L V+ G + GFLGPNGAGK+TT+ ++G+ P SGSV +
Sbjct: 1 MIEARRLTKRYGEKTAVDGLDFVVKPGTVTGFLGPNGAGKSTTMRLIVGLDAPTSGSVTV 60
Query: 63 LGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLKLV 122
G+ +E +G L E +I+ +A+ +L A + IP R++E++ L
Sbjct: 61 NGHPYAHHRAPLQE-VGALLEAKSIHPGRSAYNHLKALALTHGIPGS----RVDEVIGLA 115
Query: 123 GLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQKK 182
GL +V ++ +FS GM QRL +A AL+ DP+ ++LDEP +GLDP+G +++++
Sbjct: 116 GLDNVAKKRAGAFSLGMGQRLGIAAALLGDPQTVMLDEPVNGLDPEGVLWIRNLLKGLAD 175
Query: 183 QGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYEIKVETKQPFP 242
QG+TVF SSH++SE+ +AD + I+ +G+L T+ ++ + E G +KV T+ P
Sbjct: 176 QGRTVFVSSHLMSEMALVADHLIIVGRGRLLADTTVADLIR---EAGGDTVKVVTQDPAR 232
Query: 243 EIEL---PDVIRIEKIADNKVLIFAKSDIREILSEELSKRGITVLSLEIEEPSLEDVFL 298
++ PDV +I ++ + + REI ++ GI + L SLE+ F+
Sbjct: 233 LRDVLAGPDVDVTGRIGSEELQVTGLT-AREI-GLRAAEHGIALFGLSARSVSLEEAFM 289
>emb|CAC08414.1| (AL392178) putative ABC transport system ATP-binding protein
[Streptomyces coelicolor]
Length = 324
Score = 161 bits (404), Expect = 8e-39
Identities = 93/299 (31%), Positives = 154/299 (51%), Gaps = 9/299 (3%)
Query: 4 IEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSVRLL 63
I L KSYG +D + L V +G +F LGPNGAGKTT + + ++ PD+G +R+
Sbjct: 6 ITANGLRKSYGDKTVLDGIDLAVPEGTVFSLLGPNGAGKTTAVKILSTLVTPDAGDIRVG 65
Query: 64 GYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLKLVG 123
G+D+ P + +G + + + +T N+ A +++P+ E + ELL+
Sbjct: 66 GHDLASAPQAVRGAIGVTGQFSAVDGLITGEENMLLMADLHHLPRPEGRRVAAELLERFD 125
Query: 124 LWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQKKQ 183
L + + ++S GMK+RL +A L+ DP ++ LDEPT+GLDP+ + II
Sbjct: 126 LTEAAGKPASTYSGGMKRRLDIAMTLVGDPRIIFLDEPTTGLDPRSRHTMWQIIRALVTD 185
Query: 184 GKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYEIKVETKQPFPE 243
G TVF ++ L E +ELAD++ ++ G++ GT EE+K+ + G +++ P
Sbjct: 186 GVTVFLTTQYLEEADELADRIAVLHDGRIAAEGTAEELKRL---VPGGHVRLRFTDPTAY 242
Query: 244 IELPDVIRIEKIADNKVLIFAKS-----DIREILSEELSKRGITVLSLEIEEPSLEDVF 297
+ + DN + + S D+R IL + L GI L + P L+DVF
Sbjct: 243 RDATAALPHSAGDDNTLTLQIPSDGSQRDLRTIL-DRLDDAGIEADELTVHTPDLDDVF 300
>gb|AAK40417.1| ABC transporter, ATP binding protein [Sulfolobus solfataricus]
Length = 246
Score = 161 bits (403), Expect = 1e-38
Identities = 83/223 (37%), Positives = 136/223 (60%), Gaps = 4/223 (1%)
Query: 3 VIEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSVRL 62
++E+++L K Y + + +S V KG IF LGPNGAGKTTT+ + ++ P G V++
Sbjct: 5 IVEVKDLYKEYKDKEVLRGISFTVYKGEIFSLLGPNGAGKTTTVKILSCVLKPTRGEVKV 64
Query: 63 LGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLKLV 122
+GY + E K +ER+G +P++ + +LT N+++F YN KE +++EL+ L+
Sbjct: 65 IGYKVPNECGKIRERIGVMPQDYQGFLDLTVRENIEYFVKLYN----GKETQVDELISLL 120
Query: 123 GLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQKK 182
L V+ +K++ S G +R+ +A A E+L LDEPT GLDP+ R +II K
Sbjct: 121 DLEKVKNQKLRYLSGGYVRRVGIASAFAGSQEILFLDEPTVGLDPKARRGFWEIIKMMKN 180
Query: 183 QGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQY 225
+G T+F ++H L E ++L+D+V I+ GKL V T +EI ++
Sbjct: 181 KGVTIFLTTHYLDEAQKLSDRVAILYGGKLIKVSTADEIMAEF 223
>pir||S75436 hypothetical protein c05019 - Sulfolobus solfataricus
>gi|1707842|emb|CAA69520.1| (Y08257) putative ABC
transporter [Sulfolobus solfataricus]
Length = 246
Score = 161 bits (403), Expect = 1e-38
Identities = 83/223 (37%), Positives = 136/223 (60%), Gaps = 4/223 (1%)
Query: 3 VIEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSVRL 62
++E+++L K Y + + +S V KG IF LGPNGAGKTTT+ + ++ P G V++
Sbjct: 5 IVEVKDLYKEYKDKEVLRGISFTVYKGEIFSLLGPNGAGKTTTVKILSCVLKPTRGEVKV 64
Query: 63 LGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLKLV 122
+GY + E K +ER+G +P++ + +LT N+++F YN KE +++EL+ L+
Sbjct: 65 IGYKVPNECGKIRERIGVMPQDYQGFLDLTVRENIEYFVKLYN----GKETQVDELISLL 120
Query: 123 GLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQKK 182
L V+ +K++ S G +R+ +A A E+L LDEPT GLDP+ R +II K
Sbjct: 121 DLEKVKNQKLRYLSGGYVRRVGIASAFAGSQEILFLDEPTVGLDPKARRGFWEIIKMMKN 180
Query: 183 QGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQY 225
+G T+F ++H L E ++L+D+V I+ GKL V T +EI ++
Sbjct: 181 KGVTIFLTTHYLDEAQKLSDRVAILYGGKLIKVSTADEIMAEF 223
>pir||H70610 probable ABC-typetransmembrane transport portein - Mycobacterium
tuberculosis (strain H37RV) >gi|3261727|emb|CAB07840.1|
(Z93777) hypothetical protein Rv1218c [Mycobacterium
tuberculosis]
Length = 311
Score = 161 bits (402), Expect = 1e-38
Identities = 108/299 (36%), Positives = 167/299 (55%), Gaps = 17/299 (5%)
Query: 4 IEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSVRLL 63
IEI LTK +G +A+D L L V +G + GFLGPNGAGK+TT+ +LG++ D GSVRLL
Sbjct: 10 IEIRGLTKHFGSVRALDGLDLTVREGEVHGFLGPNGAGKSTTLRILLGLVKADGGSVRLL 69
Query: 64 GYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLKLVG 123
G D + + + + ++P + T++ LT +D A + R EL++ G
Sbjct: 70 GGDPWTDAVDLHRHIAYVPGDVTLWPSLTGGETIDLLA---RMRGGIDNARRAELIERFG 126
Query: 124 LWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQKKQ 183
L +K +++SKG +Q++ L AL + LL+LDEP+SGLDP + + I E +++
Sbjct: 127 LDPT--KKARTYSKGNRQKVSLISALSSHATLLLLDEPSSGLDPLMENVFQQCIGEARQR 184
Query: 184 GKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYEIKVETKQPFPE 243
G TV SSHIL+E E L +KV II GK G+L+ ++ L IK E
Sbjct: 185 GVTVLLSSHILAETEALCEKVTIIRAGKTVESGSLDALR----HLSRTSIKAE--MIGDP 238
Query: 244 IELPDVIRIEKIADNKVLIFAKSD---IREILSEELSKRGITVLSLEIEEPSLEDVFLK 299
+L + +E I+ + A+ D +RE++ + L G V SL + P+LE++FL+
Sbjct: 239 GDLSQIKGVEDISIEGTTVRAQVDSESLRELI-QVLGHAG--VRSLVSQPPTLEELFLR 294
>dbj|BAA95019.1| (AB033992) ATP-binding protein [Streptomyces kasugaensis]
Length = 329
Score = 161 bits (402), Expect = 1e-38
Identities = 100/294 (34%), Positives = 165/294 (56%), Gaps = 10/294 (3%)
Query: 18 AVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSVRLLGYDIFKEPIKAKER 77
A+D+++L V +G G LGPNGAGKTT + + +++P SG + G+D+ E + + R
Sbjct: 35 ALDSVNLSVPEGETHGVLGPNGAGKTTLVRILSTMLLPTSGRALVAGHDVTTEADQVRRR 94
Query: 78 LG--FLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLKLVGLWDVRYRKVKSF 135
+G F +N +Y +TA +NL F+A+ Y + ++R +ELL+ VGL D V+ F
Sbjct: 95 IGIVFGGDNG-LYTRITARQNLVFWATMYRVDASVVKRRSQELLERVGLADRADEPVEGF 153
Query: 136 SKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQKKQGKTVFFSSHILS 195
S+GM+QRL LA+ LI DP +L LDEPT G+DP R +D++ E K +G+T+ ++H +S
Sbjct: 154 SRGMRQRLHLARGLIGDPAVLFLDEPTMGMDPLATRDFRDLVHELKAEGRTILITTHDMS 213
Query: 196 EVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYEIKVETKQP--FPEIE-LPDVIRI 252
E E L D+V ++ G + I + + ++ + Q E+ LP V R+
Sbjct: 214 EAEALCDRVSLVDHGSILVTEPTATIGRMLSGHDRIDVTLREDQSPLLSELAGLPQVERV 273
Query: 253 EKIAD-NKVLIFAKS-DIREILSEELSKRGITVLSLEIEEPSLEDVFLKTIYRR 304
+K+++ V I S D ++ L GI +L P+LE+V++ + R
Sbjct: 274 DKLSEPGSVRIHTVSADANPVVLRWLLDAGID--ALRTGRPTLEEVYVHLVGNR 325
>emb|CAC08286.1| (AL392148) putative ABC transporter ATP-binding protein
[Streptomyces coelicolor]
Length = 327
Score = 160 bits (401), Expect = 2e-38
Identities = 93/221 (42%), Positives = 131/221 (59%), Gaps = 2/221 (0%)
Query: 3 VIEIENLTKSY-GKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSVR 61
VI LTK Y G AVD L L V G +FGFLGPNG+GKTTTI ++G+I P SGS R
Sbjct: 21 VIATRALTKRYRGGQLAVDGLDLTVPAGSVFGFLGPNGSGKTTTIRMLMGLIEPTSGSAR 80
Query: 62 LLGYDIFKEPIKAKERLGFLPENATIYEELTAWRNL-DFFASFYNIPKQEKEKRIEELLK 120
+LG + + R+G L E +Y L+ NL + A+ + + +R+ L
Sbjct: 81 VLGRPMPRAARAVLPRVGALIEGPALYGFLSGRDNLLRYDAADPTADPRTRRERVAAALD 140
Query: 121 LVGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQ 180
VGL +K K++S GMKQRL LA AL+ LL+LDEPT+GLDPQG R ++ ++ E
Sbjct: 141 RVGLAAAGGKKAKAYSLGMKQRLGLAAALLQPRRLLVLDEPTNGLDPQGMREIRSLVREL 200
Query: 181 KKQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEI 221
G TVF SSH+L E+E++ ++ +G+L T G + ++
Sbjct: 201 ASDGTTVFLSSHLLDEIEQVCTHAAVMAQGRLITQGAVADL 241
>pir||T09008 cdd4-like protein ScnF - Streptococcus pyogenes
>gi|2502072|gb|AAB92604.1| (AF026542) ScnF
[Streptococcus pyogenes]
Length = 299
Score = 160 bits (400), Expect = 2e-38
Identities = 99/231 (42%), Positives = 138/231 (58%), Gaps = 9/231 (3%)
Query: 4 IEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSVRLL 63
IE+ L+K Y VD + V +G I+GFLGPNGAGKTTT+ +L ++ P G + +
Sbjct: 5 IELRKLSKVYQDITTVDLEKITVREGEIYGFLGPNGAGKTTTMKMILSLVSPTLGEILIN 64
Query: 64 GYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLKLVG 123
G DI K +G + E + Y LT + NL F E I L LVG
Sbjct: 65 GEDI-KGNHAYLRVIGSMIEEPSYYPNLTGYENLLVFQKMVGFD----ESNIWPTLALVG 119
Query: 124 LWDVRYRK--VKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILE-Q 180
L + RK VK++S GMKQRL LA AL+ P++L+LDEPT+GLDP G ++++I++
Sbjct: 120 LAEENNRKKLVKAYSLGMKQRLALAFALVKKPKILLLDEPTNGLDPAGIHEIRELIVKLA 179
Query: 181 KKQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQ-YMELEG 230
K++G TVF SS ILSE+E +AD+VGII G+L G +E IK ++E+ G
Sbjct: 180 KEKGLTVFISSQILSEIEHIADRVGIINHGRLVYEGEIEAIKSNTWIEIGG 230
>sp|P19844|NOSF_PSEST COPPER TRANSPORT ATP-BINDING PROTEIN NOSF >gi|95000|pir||S13584
nosF protein - Pseudomonas stutzeri
>gi|45849|emb|CAA37716.1| (X53676) ATP-binding protein,
peripheral [Pseudomonas stutzeri]
Length = 308
Score = 159 bits (397), Expect = 5e-38
Identities = 97/302 (32%), Positives = 171/302 (56%), Gaps = 16/302 (5%)
Query: 1 MKVIEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSV 60
M +EI+ +++ YG + +L+L + +G + G G NGAGKTT++ +LG++ P G V
Sbjct: 1 MNAVEIQGVSQRYGSMTVLHDLNLNLGEGEVLGLFGHNGAGKTTSMKLILGLLSPSEGQV 60
Query: 61 RLLGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLK 120
++LG +P + + +LG+LPEN T Y +L+ L FA K +++ELL+
Sbjct: 61 KVLGRAP-NDP-QVRRQLGYLPENVTFYPQLSGRETLRHFARL----KGAALTQVDELLE 114
Query: 121 LVGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQ 180
VGL R+VK++SKGM+QRL LAQAL+ +P LL+LDEPT GLDP + + +I
Sbjct: 115 QVGLAHAADRRVKTYSKGMRQRLGLAQALLGEPRLLLLDEPTVGLDPIATQDLYLLIDRL 174
Query: 181 KKQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYEIKVET--- 237
+++G ++ SH+L VE ++ I+ KG L+ VG+L +++ + G +++
Sbjct: 175 RQRGTSIILCSHVLPGVEAHINRAAILAKGCLQAVGSLSQLRAE----AGLPVRIRASGI 230
Query: 238 --KQPFPEIELPDVIRIEKIADNKVLIFAKSDIREILSEELSKRGITVLSLEIEEPSLED 295
+ + + ++++ + + A + + +L +L G +EI +PSLED
Sbjct: 231 SERDSWLQRWTDAGHSARGLSESSIEVVAVNGHKLVLLRQLLGEG-EPEDIEIHQPSLED 289
Query: 296 VF 297
++
Sbjct: 290 LY 291
>sp|P23703|NODI_RHILO NODULATION ATP-BINDING PROTEIN I >gi|95215|pir||S13590 nodulation
protein nodI - Rhizobium meliloti
>gi|581510|emb|CAA39236.1| (X55705) nodulation gene;
integral membrane protein; homology to Rhizobium
leguminosarum nodI [Mesorhizobium loti]
Length = 339
Score = 159 bits (397), Expect = 5e-38
Identities = 93/296 (31%), Positives = 156/296 (52%), Gaps = 5/296 (1%)
Query: 4 IEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSVRLL 63
++ +TKSYG VD LS V G FG LGPNGAGK+T +LG+ PD+G++ +L
Sbjct: 41 VDFAGVTKSYGNKIVVDELSFSVASGECFGLLGPNGAGKSTIARMLLGMTCPDAGAITVL 100
Query: 64 GYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLKLVG 123
G + A+ +G +P+ + +ELT NL F ++ + ++ E I LL+
Sbjct: 101 GVPVPARARLARRGIGVVPQFDNLDQELTVRENLLVFGRYFGMSTRQSEAVIPSLLEFAR 160
Query: 124 LWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQKKQ 183
L +V S GMK+ L +A+ALINDP+L+++DEPT+GLDP L+ + + +
Sbjct: 161 LERKANARVSELSGGMKRCLTMARALINDPQLIVMDEPTTGLDPHARHLIWERLRALLAR 220
Query: 184 GKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYEIKVETKQPFPE 243
GKT+ ++H + E E L D++ ++ KG+ G + + +++ + EI
Sbjct: 221 GKTIILTTHFMEEAERLCDRLCVLEKGRNIAEGGPQALIDEHIGCQVMEIYGGDPHELLS 280
Query: 244 IELPDVIRIEKIADNKVLIFAKSDIREILSEELSKRGITVLSLEIEEPSLEDVFLK 299
+ P RIE + L D ++ ++ + G+ +L + +LEDVFL+
Sbjct: 281 LVKPHSQRIE--VSGETLYCYAPDPDQVRTQLQGRAGLRLL---LRPANLEDVFLR 331
>pir||H75288 ABC transporter, ATP-binding protein - Deinococcus radiodurans
(strain R1) >gi|6460124|gb|AAF11860.1|AE002063_3
(AE002063) ABC transporter, ATP-binding protein
[Deinococcus radiodurans]
Length = 327
Score = 159 bits (397), Expect = 5e-38
Identities = 90/219 (41%), Positives = 128/219 (58%), Gaps = 2/219 (0%)
Query: 3 VIEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSVRL 62
VIE L K Y VD L+L V G +FGFLGPNGAGK+TT+ +LG++IP G R+
Sbjct: 15 VIETRELRKVYRDRAVVDGLTLTVGAGEVFGFLGPNGAGKSTTVKMLLGLVIPSGGEARV 74
Query: 63 LGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLKLV 122
L ++A RLGFLPE +TA L+F + E R+ ++L+ V
Sbjct: 75 LCGSPADPAVRA--RLGFLPEQFRFQLWMTAEEFLNFHGQLAGMKSNELRTRVPQVLEEV 132
Query: 123 GLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQKK 182
GL ++ +SKGM QR LA A++ P+L+ LDEPTS LDP G V++II K
Sbjct: 133 GLGGRGGEQLSGYSKGMLQRCGLAGAILARPQLVFLDEPTSALDPIGRVEVREIIERLKG 192
Query: 183 QGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEI 221
+G VF +SH+LSEVE++ D+V + G++ G++ E+
Sbjct: 193 EGVAVFLNSHLLSEVEQVCDRVAFVKAGRVLQQGSMREL 231
>pir||F82934 ABC transporter UU093 [imported] - Ureaplasma urealyticum
>gi|6899047|gb|AAF30499.1|AE002109_2 (AE002109) ABC
transporter [Ureaplasma urealyticum]
Length = 236
Score = 157 bits (394), Expect = 1e-37
Identities = 87/211 (41%), Positives = 135/211 (63%), Gaps = 3/211 (1%)
Query: 3 VIEIENLTKSYGKF-KAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSVR 61
++E++NLTK Y K + V +LS V++G I F+G NG+GKTTTI S++ GS+
Sbjct: 6 ILEVKNLTKIYKKSNQGVFDLSFNVKRGEIHAFIGENGSGKTTTIKSIINAYTNYKGSIL 65
Query: 62 LLGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLKL 121
+ G+D K P K+ E++G++PE A ELT ++ L FA N+ K++ +RI L+
Sbjct: 66 IDGFDN-KTP-KSHEKIGYVPEIALFPSELTTFQYLYSFARLSNLNKKQAIERIHNFLEK 123
Query: 122 VGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQK 181
+ D++ +K +FS G K++++L QAL++DPEL+ILDEPT+ LDP +I+ E
Sbjct: 124 FRISDLKNKKPINFSSGQKKKVILIQALLHDPELIILDEPTANLDPSARHEFNNILKELH 183
Query: 182 KQGKTVFFSSHILSEVEELADKVGIIVKGKL 212
+Q KT+F SHIL E++ D + +I KGKL
Sbjct: 184 EQNKTIFICSHILKEMDTYVDSLTLIHKGKL 214
>pir||F82572 sodium ABC transporter ATP-binding protein XF2329 [imported] -
Xylella fastidiosa (strain 9a5c)
>gi|9107498|gb|AAF85128.1|AE004043_12 (AE004043) sodium
ABC transporter ATP-binding protein [Xylella fastidiosa]
Length = 248
Score = 157 bits (394), Expect = 1e-37
Identities = 80/224 (35%), Positives = 131/224 (57%), Gaps = 4/224 (1%)
Query: 3 VIEIENLTKSY----GKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSG 58
+I E+L KS+ G AV +LS G I G LGPNGAGKTTT+ + ++IPD G
Sbjct: 1 MITAEHLHKSFKTKKGLVNAVKDLSFHAADGRITGLLGPNGAGKTTTLRMLYTLLIPDQG 60
Query: 59 SVRLLGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEEL 118
+ + G D +P+ + LG LP+ IY+ LTA N+ +F + + + + R+ L
Sbjct: 61 CISIDGVDAVSDPMTVRRGLGVLPDACGIYKRLTARENIAYFGELHGLSRIDIAARLSIL 120
Query: 119 LKLVGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIIL 178
K + + D+ R+ FS G + ++ +A+AL++DP +ILDEPT+GLD R ++D +
Sbjct: 121 SKALDMDDILDRQAAGFSHGQRTKIAIARALVHDPRNIILDEPTNGLDVMTTRKLRDFLR 180
Query: 179 EQKKQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIK 222
+ + +G+ + FSSHI+ EV L D + +I G + G+ +E++
Sbjct: 181 QLRAEGRCIIFSSHIMQEVAALCDHIIVIANGTVVVAGSGDELR 224
>pir||S34187 probable ABC-type transport protein TnrB2 - Streptomyces
longisporoflavus >gi|581708|emb|CAA52012.1| (X73633)
start codon gtg [Streptomyces longisporoflavus]
Length = 300
Score = 157 bits (393), Expect = 1e-37
Identities = 98/293 (33%), Positives = 163/293 (55%), Gaps = 15/293 (5%)
Query: 9 LTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSVRLLGYDIF 68
L KS+G+ A+D L L V+ G + GFLGPNGAGK+TTI +LG++ DSG+ +
Sbjct: 4 LHKSFGRTHALDGLDLAVDSGEVHGFLGPNGAGKSTTIRVLLGLLRADSGAPSSSARTPW 63
Query: 69 KEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYN-IPKQEKEKRIEELLKLVGLWDV 127
K+ + RL ++P + ++ LT +D + + +Q +++ IE +D+
Sbjct: 64 KDAVALHRRLAYVPGDVELWPNLTGGEAIDLLSRLRGGLDRQRRDELIER-------FDL 116
Query: 128 R-YRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQKKQGKT 186
+K +++SKG +Q++ + AL +D ELL+LDEPT+GLDP + +D+IL K GKT
Sbjct: 117 DPTKKGRAYSKGNRQKVPIVAALASDAELLLLDEPTAGLDPLMEVVFQDVILRAKAAGKT 176
Query: 187 VFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYEIKVETKQPFPEIEL 246
V SSHIL++VE+L D+V II KG+ GTL E++ L ++ ET++ ++
Sbjct: 177 VLLSSHILAQVEKLCDRVSIIRKGRNVQSGTLTEMR----HLTRTTVEAETERAVTGLDA 232
Query: 247 PDVIRIEKIADNKVLIFAKSDIREILSEELSKRGITVLSLEIEEPSLEDVFLK 299
+ ++ + +V + L + GI SL P+LE++ L+
Sbjct: 233 MAGVHAVRVTERRVHFAVDGAHLDAAIHRLGEFGIR--SLTSHPPTLEELMLR 283
>gi|11498898 ABC transporter, ATP-binding protein [Archaeoglobus fulgidus]
>gi|7445659|pir||C69412 ABC transporter, ATP-binding
protein homolog - Archaeoglobus fulgidus
>gi|2649279|gb|AAB89946.1| (AE001014) ABC transporter,
ATP-binding protein [Archaeoglobus fulgidus]
Length = 303
Score = 157 bits (393), Expect = 1e-37
Identities = 105/313 (33%), Positives = 168/313 (53%), Gaps = 29/313 (9%)
Query: 1 MKVIEIENLTKSYGKFK-----AVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIP 55
M+ +E ++ Y F A+ + L++E G+IFG LGPNGAGKTT I + I+IP
Sbjct: 1 MRAVECRDVWMVYRTFMERGIVALRGIDLDIEDGVIFGLLGPNGAGKTTLISILSTILIP 60
Query: 56 DSGSVRLLGYDIFKEPIKAKERLGF-----LPENATIYEELTAWRNLDFFASFYNIPKQE 110
G VR+LG D FK K +ER+ +P +YE L F+A Y I +
Sbjct: 61 TKGEVRILGMDAFKNTRKVRERINISSGVRMPWGMKVYE------CLRFYAMCYGITDR- 113
Query: 111 KEKRIEELLKLVGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGA 170
+ ++ ++ L + R ++ S G KQ+ LA+A +NDPE++ LDEPT+ LDP A
Sbjct: 114 --RVVDRVISEFELEEHRNKRFDDLSTGNKQKANLARAFLNDPEVVFLDEPTANLDPDMA 171
Query: 171 RLVKDIILEQKKQ-GKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELE 229
+ ++ +IL K++ T+ ++H + E E L D++ I +GK+ GT EE+KK E
Sbjct: 172 KKIRQMILRIKEEKDVTIVLTTHNMREAEMLCDRIAFIKEGKIVAEGTSEELKKYTKMSE 231
Query: 230 GYEIKVETKQPFPEIELPDVIRIEKIADNKVLIFAKSDIREILSE---ELSKRGITVLSL 286
+K+ K ++ +P R+ D LI D + L L+++G+ V S
Sbjct: 232 RVILKL--KGNAKKLHIPYPYRM----DGNTLIAFVEDAEKALPSIVVRLAEQGVFVESA 285
Query: 287 EIEEPSLEDVFLK 299
++EE +LEDVF++
Sbjct: 286 KMEEITLEDVFIE 298
>dbj|BAB10070.1| (AB010069) contains similarity to ABC transporter~gene_id:K11J9.23
[Arabidopsis thaliana]
Length = 917
Score = 157 bits (392), Expect = 2e-37
Identities = 98/292 (33%), Positives = 162/292 (54%), Gaps = 11/292 (3%)
Query: 18 AVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSVRLLGYDIFKEPIKAKER 77
AV L L V G FG LGPNGAGKT+ I M G++ P SG+ + G DI K+ K
Sbjct: 615 AVRGLYLSVSSGECFGMLGPNGAGKTSFISMMTGLLKPSSGTALVQGLDICKDMNKVYTS 674
Query: 78 LGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLKLVGLWD--VRYRKVKSF 135
+G P++ ++E LT +L F+ NI + + +EE LK V L+D V + ++
Sbjct: 675 MGVCPQHDLLWETLTGREHLLFYGRLKNIKGSDLTQAVEESLKSVSLYDGGVGDKPAGNY 734
Query: 136 SKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQKKQGKTVFFSSHILS 195
S GMK+RL +A +LI +P+++ LDEP++GLDP + + ++I ++ KQ + ++H +
Sbjct: 735 SGGMKRRLSVAISLIGNPKVVYLDEPSTGLDPASRKNLWNVI-KRAKQNTAIILTTHSME 793
Query: 196 EVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYEIKVETK-----QPFPEIELPDVI 250
E E L D++GI V G L+ +G +E+K +Y + + +K + E P+
Sbjct: 794 EAEFLCDRLGIFVDGGLQCIGNSKELKSRYGGSYVFTMTTSSKHEEEVERLVESVSPNAK 853
Query: 251 RIEKIADNKVLIFAKSDIR--EIL-SEELSKRGITVLSLEIEEPSLEDVFLK 299
+I +A + K ++R E+ + E +K TV + + + +LEDVF+K
Sbjct: 854 KIYHLAGTQKFELPKQEVRIAEVFRAVEKAKANFTVFAWGLADTTLEDVFIK 905
>gb|AAF81232.1| (AF263012) ABC transporter ATP binding protein [Streptomyces
griseus subsp. griseus]
Length = 318
Score = 155 bits (389), Expect = 4e-37
Identities = 107/309 (34%), Positives = 173/309 (55%), Gaps = 20/309 (6%)
Query: 3 VIEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSVRL 62
+IE ++TK +G F A+ L+L V +G+++G+LGPNGAGK+TTI ++G+ P SG VR+
Sbjct: 4 LIECTDVTKKFGDFTALSRLNLTVPQGVVYGYLGPNGAGKSTTIRMLMGLSRPTSGQVRV 63
Query: 63 LGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLKLV 122
LG D ++ R+G+LP + E LT + L AS+ + +EL++
Sbjct: 64 LGQDPTDPEVR--RRIGYLPGELRLDERLTIGQTL---ASWGRLRGLTDTAYRDELVQRF 118
Query: 123 GLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQKK 182
G+ R +V+ S G ++++ L A + PELLILDEPT+GLDP ++ + E +
Sbjct: 119 GIDPSR--RVRGLSTGNRRKVGLVGAFMAKPELLILDEPTNGLDPLMQQVFLATVEEARD 176
Query: 183 QGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYEIKVETKQPFP 242
G++V SSHILSEVE +AD V ++ G+L G +E++++ + + I + P
Sbjct: 177 NGQSVLLSSHILSEVERVADVVAVLQGGRLAASGPTQELRRR--AAQRFHITFAEGEDVP 234
Query: 243 EIEL------PDVIRIEKIADNKVLIFAKSDIREILSEELSKRGITVLSLEIEEPSLEDV 296
L DV R + + +V+ A + + L + L+ R IT L+ EP LE+
Sbjct: 235 LAALAGLEGASDVER--RSPEGQVVSLAWAGSPDALLKFLAGRRITTLT--APEPDLEEA 290
Query: 297 FLKTIYRRD 305
FL+ Y+RD
Sbjct: 291 FLE-YYQRD 298
>emb|CAB75312.1| (AL139164) putative ABC transporter ATP-binding protein
[Streptomyces coelicolor A3(2)]
Length = 866
Score = 155 bits (388), Expect = 6e-37
Identities = 106/307 (34%), Positives = 160/307 (51%), Gaps = 18/307 (5%)
Query: 4 IEIENLTKSYG---KFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSV 60
++I L+K Y + AV LS VEKG + G LGPNGAGKTTT+ ++G+I PD G +
Sbjct: 565 LQITGLSKRYAGSAERYAVRELSFRVEKGQVLGLLGPNGAGKTTTLRMLMGLIKPDDGEI 624
Query: 61 RLLGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLK 120
R+ G+ I + R+G E A L+ NL+ + P + ++E L+
Sbjct: 625 RVFGHAI-RPGAPVLSRVGAFVEGAGFLPHLSGRENLELYWRATGRPPENAH--LDEALE 681
Query: 121 LVGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQ 180
+ GL D R V+++S+GM+QRL +AQA++ P+LLILDEPT+GLDP R ++++++
Sbjct: 682 IAGLGDALARAVRTYSQGMRQRLAIAQAMLGLPDLLILDEPTNGLDPPQIREMREVMIRY 741
Query: 181 KKQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYEIKVETKQP 240
G+TV SSH+L+EVE+ + ++ +G+L G + EI G + V T P
Sbjct: 742 AAAGRTVIVSSHLLAEVEQSCTHLVVMDRGRLVQAGPVAEIIG-----SGDTLLVGTGLP 796
Query: 241 FPE------IELPDVIRIEKIADNKVLIFAKSDIREILSEELSKRGITVLSLEIEEPSLE 294
E LP V + D ++ L EL + I V S+ LE
Sbjct: 797 VDEPLVDKVAALPGVASVVHTDDGLLVRLDPGGTAPGLVAELVRLEIPVASVG-PHRRLE 855
Query: 295 DVFLKTI 301
D FL I
Sbjct: 856 DAFLTLI 862
>pir||T18288 ABC transport protein - slime mold (Dictyostelium discoideum)
(fragment) >gi|1513298|gb|AAB06789.1| (U66526) AbcA
[Dictyostelium discoideum]
Length = 1336
Score = 155 bits (387), Expect = 7e-37
Identities = 86/239 (35%), Positives = 137/239 (56%), Gaps = 10/239 (4%)
Query: 9 LTKSYGKF-------KAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSVR 61
L+KSY K AV LSL VEKG I GFLG NG GK+TTI + G++ P +G
Sbjct: 384 LSKSYTKLFRPKKTVHAVKYLSLSVEKGTILGFLGSNGCGKSTTIGMLTGLLEPTAGDAL 443
Query: 62 LLGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLKL 121
+ G+ + + +P++ ++ E+TA +L F+ IP QE+E +I+++L
Sbjct: 444 VYGHSVISNIAAVRRITSVVPQHDILWAEMTAREHLQLFSELKGIPAQERESQIQKVLDQ 503
Query: 122 VGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQK 181
V L + + ++S GMK+RL +A A I DP+++ +DEPT+G+DP R + D++ +
Sbjct: 504 VRLSKISNNLISTYSGGMKRRLSVAIACIGDPKIIFMDEPTTGVDPSSKRHLIDLV-KSI 562
Query: 182 KQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYEIKVETKQP 240
K K + +SH + EVE LADK+ I+ +G + G ++K +Y EGY + + K P
Sbjct: 563 KNDKVIILTSHDMHEVEILADKIVIMNEGVMACNGNSLQLKSKYG--EGYSVNIVAKSP 619
>pir||B83294 probable ATP-binding component of ABC transporter PA2812 [imported]
- Pseudomonas aeruginosa (strain PAO1)
>gi|9948896|gb|AAG06200.1|AE004708_6 (AE004708) probable
ATP-binding component of ABC transporter [Pseudomonas
aeruginosa]
Length = 310
Score = 154 bits (386), Expect = 1e-36
Identities = 94/299 (31%), Positives = 163/299 (54%), Gaps = 3/299 (1%)
Query: 4 IEIENLTKSYGK-FKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSVRL 62
+ I LTK+YG F+A+ + L+V +G F LGPNGAGK+TTI + ++ SGSV +
Sbjct: 5 LSIRQLTKTYGNGFQALKGIDLDVAEGDFFALLGPNGAGKSTTIGILSTLVNKTSGSVSV 64
Query: 63 LGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLKLV 122
G+D+ K+P K LG +P+ + + + A +Y IP + ++R E L +
Sbjct: 65 FGHDLDKDPAGLKRCLGVVPQEFNFNQFEKVFDIVVTQAGYYGIPAKIAKERAERYLTQL 124
Query: 123 GLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQKK 182
GLWD R + S GMK+RL++A+AL++ P LLILDEPT+G+D + R + + E +
Sbjct: 125 GLWDKRNEASRMLSGGMKRRLMIARALVHQPRLLILDEPTAGVDIELRRSMWSFLTELNQ 184
Query: 183 QGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYEIKVETKQPFP 242
+G ++ ++H L E E+L + II G++ ++ ++ + E + + ++ Q P
Sbjct: 185 EGISIILTTHYLEEAEQLCRNIAIIDHGEIVQNTSMRDL-LMTLHSETFLLDLKNVQALP 243
Query: 243 EIELPDVIRIEKIADNKVLIFAKSDIREILSEELSKRGITVLSLEIEEPSLEDVFLKTI 301
R+ +V + I ++ + +L +GI VLSL + LE++F+ +
Sbjct: 244 PTLDGYPTRLVDDHTLEVQVEKSQGINDLFA-QLGAQGIEVLSLRNKTNRLEELFVSLV 301
>pir||T36316 probable ABC-type transport system ATP-binding protein -
Streptomyces coelicolor >gi|4490633|emb|CAB38595.1|
(AL035654) putative ABC transporter ATP-binding protein
[Streptomyces coelicolor A3(2)]
Length = 317
Score = 154 bits (385), Expect = 1e-36
Identities = 101/306 (33%), Positives = 171/306 (55%), Gaps = 23/306 (7%)
Query: 3 VIEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSVRL 62
+I ++ LTK YG AV +LS E+ G + GFLGPNGAGK+TT+ ++G+ P SG +
Sbjct: 1 MITLDRLTKRYGDKTAVSDLSFEINPGKVTGFLGPNGAGKSTTMRMIVGLDAPTSGRALV 60
Query: 63 LG--YDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLK 120
G Y+ + P++ +G L + + +A +L A IP R+ E+L+
Sbjct: 61 GGKRYEELRHPLR---EVGALLDARAGHPGRSARHHLLGLARSNGIPAS----RVGEVLQ 113
Query: 121 LVGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQ 180
VGL +V +++ SFS GM QRL +A AL+ DP++L+ DEP +GLDP G R V++++
Sbjct: 114 TVGLSEVANKRIGSFSLGMGQRLGIAAALLGDPKVLLFDEPVNGLDPDGVRWVRELMRSL 173
Query: 181 KKQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYEI-KVETKQ 239
+G+T+F SSH++SE++E AD + +I +GK+ +EE+ + G + V +
Sbjct: 174 AAEGRTIFVSSHLMSEMQETADHLLVIGRGKIIADAPIEEV------IAGSSLTAVRVRT 227
Query: 240 PFPEIELPDV----IRIEKIADN--KVLIFAKSDIREILSEELSKRGITVLSLEIEEPSL 293
P P++ ++ +R+E AD+ L+ + EI R + + L + + SL
Sbjct: 228 PQPDVLRRELLEFGLRVEPNADSAPDELLVVGGTLEEIGDLAFHHR-VPIHELSMRKASL 286
Query: 294 EDVFLK 299
E +++
Sbjct: 287 EQAYME 292
>gb|AAC17172.1| (AF065141) ABC transporter ATP-binding protein homolog
[Streptococcus mutans]
Length = 293
Score = 153 bits (384), Expect = 2e-36
Identities = 105/289 (36%), Positives = 163/289 (56%), Gaps = 14/289 (4%)
Query: 2 KVIEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSVR 61
KV+EI++L+K YG+ A+DN++L ++KG I+G +G NGAGKTT I + +I P GSV
Sbjct: 3 KVLEIKHLSKRYGQQLALDNVNLTIQKGEIYGLIGKNGAGKTTLIKVITKLIQPSQGSVS 62
Query: 62 LLGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLKL 121
+ G E A +R+G + E LTA +NL ++ ++P +K I+E L L
Sbjct: 63 VFGSSTQSEWTHALKRVGSVIETPVALNHLTARQNLHYYCKARHVPNADKV--IDESLTL 120
Query: 122 VGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILE-Q 180
VGL + +K + FS GMKQRL +A ALI P+ LILDEP +GLDP + + +I +
Sbjct: 121 VGLTNTGKKKFRGFSLGMKQRLGIAIALIVKPDFLILDEPINGLDPVAIKEFRHMIKKLN 180
Query: 181 KKQGKTVFFSSHILS-EVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYEIKVETKQ 239
++ TV SSHILS E+ ++A K GII G++ ++EI K + + + V
Sbjct: 181 EEHDMTVIISSHILSDELYQVATKFGIIENGRI-----IKEISKADFDTQSEDYIVLKTS 235
Query: 240 PFPEIE--LPDVIRIE-KI--ADNKVLIFAKSDIREILSEELSKRGITV 283
E L D + K+ ADN++ +F +S + + +EL + +
Sbjct: 236 HINEASQILQDQMNYRIKVTNADNEIHVFGQSHSIKGIVKELVANAVDI 284
>gb|AAC44025.1| (U47133) NosF protein [Sinorhizobium meliloti]
>gi|1588788|prf||2209347D nosF gene [Rhizobium meliloti]
Length = 304
Score = 152 bits (381), Expect = 4e-36
Identities = 105/295 (35%), Positives = 157/295 (52%), Gaps = 6/295 (2%)
Query: 4 IEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSVRLL 63
+EI ++K YG V ++S + +G NGAGKTT I MLG+I P G VR+L
Sbjct: 5 VEIAGVSKCYGDSTVVRDISFGLGAAETVALVGHNGAGKTTLIKLMLGLIRPTKGLVRVL 64
Query: 64 GYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLKLVG 123
G + ++RLG+LPE+ + LT L F+A KQ +L + VG
Sbjct: 65 GENPATGDFAVRQRLGYLPESVSFNMALTGRETLRFYARL----KQVDGAATGDLFERVG 120
Query: 124 L-WDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQKK 182
L + R V+++SKGM+QRL LAQAL+ P +L+LDEPTSGLDP R ++I E +
Sbjct: 121 LAQEAVDRPVRTYSKGMRQRLGLAQALLGMPRILLLDEPTSGLDPALRRNFYELITELRA 180
Query: 183 QGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYEIKVETKQPFP 242
+G TV SSH L+E+E AD+V I+ KG GTLE++++ +K+ P
Sbjct: 181 KGTTVLLSSHALTELEGRADRVIIVNKGVKIADGTLEQLRRIARLPTRISLKLSQAGATP 240
Query: 243 EIELPDVIRIEKIADNKVLIFAKSDIREILSEELSKRGITVLSLEIEEPSLEDVF 297
L ++ + D V SD + L +++ + L I EP+L+D++
Sbjct: 241 -AWLNGGMKWCRGPDGAVDAEVSSDRKIALLHDITSDAALLSGLTITEPTLDDLY 294
>pir||C70529 probable ABC transporter - Mycobacterium tuberculosis (strain
H37RV) >gi|2181979|emb|CAB09479.1| (Z96072) hypothetical
protein Rv2688c [Mycobacterium tuberculosis]
Length = 301
Score = 152 bits (380), Expect = 5e-36
Identities = 89/223 (39%), Positives = 131/223 (57%), Gaps = 6/223 (2%)
Query: 2 KVIEIENLTKSYGKFK--AVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGS 59
+VI + LT Y K AV + V +G IFG LGP+GAGK+TT ++G++ G
Sbjct: 16 EVIRVRGLTFRYPKAAEPAVRGMEFTVGRGEIFGLLGPSGAGKSTTQKLLIGLLRDHGGQ 75
Query: 60 VRLLGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELL 119
+ + + ER+G E Y++LT + NL FFAS Y + +LL
Sbjct: 76 ATVWDKEPAEWGPDYYERIGVSFELPNHYQKLTGYENLRFFASLYAGATADPM----QLL 131
Query: 120 KLVGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILE 179
VGL D + V +SKGM+ RL A++LINDPELL LDEPTSGLDP AR +KDII++
Sbjct: 132 AAVGLADDAHTLVGKYSKGMQMRLPFARSLINDPELLFLDEPTSGLDPVNARKIKDIIVD 191
Query: 180 QKKQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIK 222
K +G+T+F ++H ++ +EL D+V +V G++ + + E+K
Sbjct: 192 LKARGRTIFLTTHDMATADELCDRVAFVVDGRIVALDSPTELK 234
>pir||T36764 probable ABC-type transport system ATP-binding protein -
Streptomyces coelicolor >gi|5531452|emb|CAB50957.1|
(AL096849) putative ABC-transporter ATP-binding protein
[Streptomyces coelicolor A3(2)]
Length = 306
Score = 152 bits (379), Expect = 6e-36
Identities = 102/296 (34%), Positives = 158/296 (52%), Gaps = 13/296 (4%)
Query: 4 IEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSVRLL 63
I +E LTK YG+ AVD+LS V G + GF GPNGAGKTT + +++G+ P +G +
Sbjct: 13 IRVEGLTKRYGRATAVDDLSFTVGTGRVTGFFGPNGAGKTTALKAVVGLARPTAGRAFVR 72
Query: 64 GYDIFKEPIKAKERL-GFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLKLV 122
G + +K RL G E + T +L A+ +P+ +R+ E+L+LV
Sbjct: 73 GTPV--AALKPDARLLGVHIEPCGAHPGRTGRAHLRSLAALAGLPR----RRVGEVLELV 126
Query: 123 GLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQKK 182
GL + +V +S GM+QRL LA AL+ DPE+L+LDEP +GLDPQG R ++ ++ E+
Sbjct: 127 GLEEAARGRVGKYSMGMRQRLGLAAALLGDPEILVLDEPVNGLDPQGIRWLRTLLRERAA 186
Query: 183 QGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYEIKVETKQPFP 242
+G TV SSH+L E + D V +I +G+L G + ++++ + + V T +
Sbjct: 187 KGGTVLLSSHMLGEAAQTVDDVVVINRGRLVHEGAIRDLERSGERV----VAVRTAEAER 242
Query: 243 EIELPDVI-RIEKIADNKVLIFAKSDIREILSEELSKRGITVLSLEIEEPSLEDVF 297
EL K D L+ D+ E+ + + G+ V + SLED F
Sbjct: 243 LSELVTAAGGRTKTDDGGRLLVEGLDVTEV-ARLAHRDGVLVEEITERTASLEDAF 297
>pir||E81337 ABC-transporter ATP-binding protein Cj0669 [imported] -
Campylobacter jejuni (strain NCTC 11168)
>gi|6968131|emb|CAB72946.1| (AL139076) ABC-transporter
ATP-binding protein [Campylobacter jejuni]
Length = 242
Score = 152 bits (379), Expect = 6e-36
Identities = 85/237 (35%), Positives = 137/237 (56%), Gaps = 8/237 (3%)
Query: 1 MKVIEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSV 60
M +EI NL K K K + +SLEV G + G LGPNGAGKTTT + G+I P SG V
Sbjct: 1 MSKLEIVNLEKIIKKTKIIHGISLEVNSGEVVGLLGPNGAGKTTTFYMICGLISPSSGKV 60
Query: 61 RLLGYDIFKEPI--KAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEEL 118
L G D+ K+P+ +A+ +G+LP+ ++I+++L+ NL A + K+ ++E++
Sbjct: 61 LLDGLDVTKDPLNKRARSGIGYLPQESSIFKDLSVEDNLLLAAQIFYKDKKILHDKVEQM 120
Query: 119 LKLVGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIIL 178
L+L+ + +R RK S S G ++R +A++L+ +P+ L+LDEP +G+DP ++ +I
Sbjct: 121 LELLSIEPIRLRKGLSLSGGERRRCEIARSLMCEPKFLLLDEPFAGVDPIAVAEIQTLIK 180
Query: 179 EQKKQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEI------KKQYMELE 229
E K+ G V + H + E + D+ +I G L G +EI KK Y+ E
Sbjct: 181 ELKRLGIGVLITDHNVRETLAICDRAYVIRSGSLLASGNADEIATNKDVKKYYLGAE 237
>dbj|BAB16596.1| (AB037937) ABC2 [Rattus norvegicus]
Length = 2434
Score = 151 bits (378), Expect = 8e-36
Identities = 99/315 (31%), Positives = 168/315 (52%), Gaps = 21/315 (6%)
Query: 3 VIEIENLTKSY-----GKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDS 57
+++IENLTK Y G+ AVD L L V G FG LG NGAGKT+T + G
Sbjct: 2050 MVKIENLTKVYKSRKIGRILAVDRLCLGVRPGECFGLLGVNGAGKTSTFKMLTGDESTTG 2109
Query: 58 GSVRLLGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEE 117
G + G+ + K+ ++ ++ LG+ P+ +++ELTA +L + IP +++ + +
Sbjct: 2110 GEAFVNGHSVLKDLLQVQQSLGYCPQFDALFDELTAREHLQLYTRLRGIPWKDEAQVVRW 2169
Query: 118 LLKLVGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDII 177
L+ + L + S+S G K++L A ALI P + LDEPT+G+DP+ R + ++I
Sbjct: 2170 ALEKLELTKCADKPAGSYSGGNKRKLSTAIALIGYPAFIFLDEPTTGMDPKARRFLWNLI 2229
Query: 178 LEQKKQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYEIKVET 237
L+ K G++V +SH + E E + ++ I+V G+LR +G+++ +K ++ +GY I V T
Sbjct: 2230 LDLIKTGRSVVLTSHSMEECEAVCTRLAIMVNGRLRCLGSIQHLKNRFG--DGYMITVRT 2287
Query: 238 KQPFPEIELPDVIR----------IEKIADNKVLIFAKSDIREILSEELSKRGITVLSLE 287
K + DV+R +++ KV KS+ L++ SK V L
Sbjct: 2288 KS---SQNVKDVVRFFNRNFPEAMLKERHHTKVQYQLKSE-HISLAQVFSKMEHVVGVLG 2343
Query: 288 IEEPSLEDVFLKTIY 302
IE+ S+ L ++
Sbjct: 2344 IEDYSVSQTTLDNVF 2358
Score = 147 bits (368), Expect = 1e-34
Identities = 97/336 (28%), Positives = 179/336 (52%), Gaps = 43/336 (12%)
Query: 3 VIEIENLTKSYGKFK--AVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSV 60
V+ ++ LTK Y K A++ LSL + + + FLG NGAGKTTT+ + G+ P SGS
Sbjct: 989 VVCVDKLTKVYKNDKKLALNKLSLNLYENQVVSFLGHNGAGKTTTMSILTGLFPPTSGSA 1048
Query: 61 RLLGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLK 120
+ G+DI E + ++ LG P++ ++++LT +L F++ ++ ++E K ++++++
Sbjct: 1049 TIYGHDIRTEMDEIRKNLGMCPQHNVLFDQLTVEEHLWFYSRLKSMAQEEIRKEMDKMIE 1108
Query: 121 LVGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQ 180
+ L + R+ V++ S GMK++L +A A + +ILDEPT+G+DP R + D+IL+
Sbjct: 1109 DLELSNKRHSLVQTLSGGMKRKLSVAIAFVGGSRAIILDEPTAGVDPYARRAIWDLILKY 1168
Query: 181 KKQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYEIKVETKQP 240
K G+T+ S+H + E + L D++ II GKL+ G+ +K Y +GY + + +
Sbjct: 1169 -KPGRTILLSTHHMDEADLLGDRIAIISHGKLKCCGSPLFLKGAYG--DGYRLTLVKRPA 1225
Query: 241 FP----------------------EIELPDVIRIEKIADNKVLIFAKSDIREILSEELSK 278
P E+++ IR + +A + ++ +++ IL E K
Sbjct: 1226 EPGTSQEPGMASSPSGRPQLSNCSEMQVSQFIR-KHVASSLLVSDTSTELSYILPSEAVK 1284
Query: 279 RG---------------ITVLSLEIEEPSLEDVFLK 299
+G + + S + + +LE+VFLK
Sbjct: 1285 KGAFERLFQQLEHSLDALHLSSFGLMDTTLEEVFLK 1320
>emb|CAB94564.1| (AL359152) putative ABC transporter ATP-binding subunit
[Streptomyces coelicolor A3(2)]
Length = 423
Score = 151 bits (377), Expect = 1e-35
Identities = 86/210 (40%), Positives = 129/210 (60%), Gaps = 5/210 (2%)
Query: 3 VIEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSVRL 62
+IE LTK YG AV NLS +V G + GFLGPNG+GK+TT+ +LG+ P +G V +
Sbjct: 1 MIEAVGLTKRYGDKTAVYNLSFQVRPGAVTGFLGPNGSGKSTTMRMILGLDNPTAGHVTI 60
Query: 63 LGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLKLV 122
G+ + P A +G L + ++ A +L A IP +R++E+L +V
Sbjct: 61 GGHPYRRLP-NAARHVGALLDAKAVHGGRAARNHLLSLAQLSGIPA----RRVDEVLGVV 115
Query: 123 GLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQKK 182
GL DV R+ K FS GM QRL +A AL+ DP++L+ DEP +GLDP+G V++++
Sbjct: 116 GLQDVAKRRSKGFSLGMGQRLGIAAALLGDPQVLLFDEPVNGLDPEGIHWVRNLMKALAA 175
Query: 183 QGKTVFFSSHILSEVEELADKVGIIVKGKL 212
+G+TVF SSH++SE+ AD + +I +G+L
Sbjct: 176 EGRTVFVSSHLMSEMALTADHLIVIGRGQL 205
>pir||H72301 ABC transporter, ATP-binding protein - Thermotoga maritima (strain
MSB8) >gi|4981596|gb|AAD36131.1|AE001765_10 (AE001765)
ABC transporter, ATP-binding protein [Thermotoga
maritima]
Length = 236
Score = 150 bits (376), Expect = 1e-35
Identities = 81/233 (34%), Positives = 135/233 (57%), Gaps = 2/233 (0%)
Query: 1 MKVIEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSV 60
M V+ ENL K +G+ V+ ++LE +G I G LGPNGAGKTT +LG+++P SG +
Sbjct: 1 MDVLRCENLKKRFGRRYVVNGVNLEFHRGEIVGLLGPNGAGKTTIFNMILGVVVPTSGKI 60
Query: 61 RLLGYDIFKEPIKAKERLG--FLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEEL 118
DI K P+ + RLG +L + +I+ LT N+D F+ K+++E++IEEL
Sbjct: 61 IFRDVDITKFPVYRRARLGITYLQQETSIFGGLTVRENIDLVLRFHEKDKEKRERKIEEL 120
Query: 119 LKLVGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIIL 178
L L + + S G K++L LA+ + +P ++LDEP SG+DP+ + ++ + L
Sbjct: 121 LHEFHLKHLENQPASFLSGGEKRKLELARMMCLNPAFILLDEPFSGIDPKTVKEIQKMTL 180
Query: 179 EQKKQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGY 231
E K++ + + H + E+ E+AD++ +I KG++ G+ E I + E Y
Sbjct: 181 ELKQKNFGIVITDHNVDELVEIADRIYVIYKGEILAEGSPERILEDETVREVY 233
>prf||1914270A nodulation protein [Bradyrhizobium japonicum]
Length = 306
Score = 150 bits (375), Expect = 2e-35
Identities = 96/296 (32%), Positives = 152/296 (50%), Gaps = 5/296 (1%)
Query: 4 IEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSVRLL 63
I++ + KS+G V++LS V +G FG LGPNGAGK+T +LG+I PD G + +L
Sbjct: 8 IDLVGVRKSFGDKVIVNDLSFSVARGECFGLLGPNGAGKSTIARMLLGMISPDRGKITVL 67
Query: 64 GYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLKLVG 123
+ A+ +G +P+ + E T NL F ++ + + E + LL+
Sbjct: 68 DEPVPSRARAARVAVGVVPQFDNLEPEFTVRENLLVFGRYFGMSARTIEAVVPSLLEFAR 127
Query: 124 LWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQKKQ 183
L +V S GMK+RL LA+ALINDP LL++DEPT+GLDP L+ + + +
Sbjct: 128 LESKADVRVSLLSGGMKRRLTLARALINDPHLLVMDEPTTGLDPHARHLIWERLRALLAR 187
Query: 184 GKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYEIKVETKQPFPE 243
GKT+ ++H + E E L D++ ++ G G + + +++ EI E
Sbjct: 188 GKTILLTTHFMEEAERLCDRLCVLESGCKIAEGKPDALIDEHIGCNVIEIYGGDLDQLRE 247
Query: 244 IELPDVIRIEKIADNKVLIFAKSDIREILSEELSKRGITVLSLEIEEPSLEDVFLK 299
+ P RIE + +F + + +S L RG T L + P+LEDVFL+
Sbjct: 248 LIRPYAHRIEVSGET---LFCYARCPDEISVHL--RGRTDLRVLQRPPNLEDVFLR 298
>pir||A59189 ATP-binding cassette transporter - human (fragment)
>gi|5689461|dbj|BAA83014.1| (AB028985) KIAA1062 protein
[Homo sapiens]
Length = 1529
Score = 150 bits (374), Expect = 3e-35
Identities = 86/254 (33%), Positives = 145/254 (56%), Gaps = 10/254 (3%)
Query: 3 VIEIENLTKSY-----GKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDS 57
+++IENLTK Y G+ AVD L L V G FG LG NGAGKT+T + G
Sbjct: 1143 MVKIENLTKVYKSRKIGRILAVDRLCLGVRPGECFGLLGVNGAGKTSTFKMLTGDESTTG 1202
Query: 58 GSVRLLGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEE 117
G + G+ + KE ++ ++ LG+ P+ +++ELTA +L + I +++ + ++
Sbjct: 1203 GEAFVNGHSVLKELLQVQQSLGYCPQCDALFDELTAREHLQLYTRLRGISWKDEARVVKW 1262
Query: 118 LLKLVGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDII 177
L+ + L + ++S G K++L A ALI P + LDEPT+G+DP+ R + ++I
Sbjct: 1263 ALEKLELTKYADKPAGTYSGGNKRKLSTAIALIGYPAFIFLDEPTTGMDPKARRFLWNLI 1322
Query: 178 LEQKKQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYEIKVET 237
L+ K G++V +SH + E E L ++ I+V G+LR +G+++ +K ++ +GY I V T
Sbjct: 1323 LDLIKTGRSVVLTSHSMEECEALCTRLAIMVNGRLRCLGSIQHLKNRFG--DGYMITVRT 1380
Query: 238 KQPFPEIELPDVIR 251
K + DV+R
Sbjct: 1381 KS---SQSVKDVVR 1391
Score = 145 bits (362), Expect = 6e-34
Identities = 96/336 (28%), Positives = 178/336 (52%), Gaps = 43/336 (12%)
Query: 3 VIEIENLTKSYGKFK--AVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSV 60
V+ ++ LTK Y K A++ LSL + + + FLG NGAGKTTT+ + G+ P SGS
Sbjct: 83 VVCVDKLTKVYKDDKKLALNKLSLNLYENQVVSFLGHNGAGKTTTMSILTGLFPPTSGSA 142
Query: 61 RLLGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLK 120
+ G+DI E + ++ LG P++ +++ LT +L F++ ++ ++E + ++++++
Sbjct: 143 TIYGHDIRTEMDEIRKNLGMCPQHNVLFDRLTVEEHLWFYSRLKSMAQEEIRREMDKMIE 202
Query: 121 LVGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQ 180
+ L + R+ V++ S GMK++L +A A + +ILDEPT+G+DP R + D+IL+
Sbjct: 203 DLELSNKRHSLVQTLSGGMKRKLSVAIAFVGGSRAIILDEPTAGVDPYARRAIWDLILKY 262
Query: 181 KKQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYEIKVETKQP 240
K G+T+ S+H + E + L D++ II GKL+ G+ +K Y +GY + + +
Sbjct: 263 -KPGRTILLSTHHMDEADLLGDRIAIISHGKLKCCGSPLFLKGTYG--DGYRLTLVKRPA 319
Query: 241 FP----------------------EIELPDVIRIEKIADNKVLIFAKSDIREILSEELSK 278
P E+++ IR + +A ++ +++ IL E +K
Sbjct: 320 EPGGPQEPGLASSPPGRAPLSSCSELQVSQFIR-KHVASCLLVSDTSTELSYILPSEAAK 378
Query: 279 RG---------------ITVLSLEIEEPSLEDVFLK 299
+G + + S + + +LE+VFLK
Sbjct: 379 KGAFERLFQHLERSLDALHLSSFGLMDTTLEEVFLK 414
>gb|AAG09372.1|AF178941_1 (AF178941) ATP-binding cassette sub-family A member 2 [Homo sapiens]
Length = 2436
Score = 150 bits (374), Expect = 3e-35
Identities = 86/254 (33%), Positives = 145/254 (56%), Gaps = 10/254 (3%)
Query: 3 VIEIENLTKSY-----GKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDS 57
+++IENLTK Y G+ AVD L L V G FG LG NGAGKT+T + G
Sbjct: 2050 MVKIENLTKVYKSRKIGRILAVDRLCLGVRPGECFGLLGVNGAGKTSTFKMLTGDESTTG 2109
Query: 58 GSVRLLGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEE 117
G + G+ + KE ++ ++ LG+ P+ +++ELTA +L + I +++ + ++
Sbjct: 2110 GEAFVNGHSVLKELLQVQQSLGYCPQCDALFDELTAREHLQLYTRLRGISWKDEARVVKW 2169
Query: 118 LLKLVGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDII 177
L+ + L + ++S G K++L A ALI P + LDEPT+G+DP+ R + ++I
Sbjct: 2170 ALEKLELTKYADKPAGTYSGGNKRKLSTAIALIGYPAFIFLDEPTTGMDPKARRFLWNLI 2229
Query: 178 LEQKKQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYEIKVET 237
L+ K G++V +SH + E E L ++ I+V G+LR +G+++ +K ++ +GY I V T
Sbjct: 2230 LDLIKTGRSVVLTSHSMEECEALCTRLAIMVNGRLRCLGSIQHLKNRFG--DGYMITVRT 2287
Query: 238 KQPFPEIELPDVIR 251
K + DV+R
Sbjct: 2288 KS---SQSVKDVVR 2298
Score = 145 bits (362), Expect = 6e-34
Identities = 96/336 (28%), Positives = 178/336 (52%), Gaps = 43/336 (12%)
Query: 3 VIEIENLTKSYGKFK--AVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSV 60
V+ ++ LTK Y K A++ LSL + + + FLG NGAGKTTT+ + G+ P SGS
Sbjct: 990 VVCVDKLTKVYKDDKKLALNKLSLNLYENQVVSFLGHNGAGKTTTMSILTGLFPPTSGSA 1049
Query: 61 RLLGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLK 120
+ G+DI E + ++ LG P++ +++ LT +L F++ ++ ++E + ++++++
Sbjct: 1050 TIYGHDIRTEMDEIRKNLGMCPQHNVLFDRLTVEEHLWFYSRLKSMAQEEIRREMDKMIE 1109
Query: 121 LVGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQ 180
+ L + R+ V++ S GMK++L +A A + +ILDEPT+G+DP R + D+IL+
Sbjct: 1110 DLELSNKRHSLVQTLSGGMKRKLSVAIAFVGGSRAIILDEPTAGVDPYARRAIWDLILKY 1169
Query: 181 KKQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYEIKVETKQP 240
K G+T+ S+H + E + L D++ II GKL+ G+ +K Y +GY + + +
Sbjct: 1170 -KPGRTILLSTHHMDEADLLGDRIAIISHGKLKCCGSPLFLKGTYG--DGYRLTLVKRPA 1226
Query: 241 FP----------------------EIELPDVIRIEKIADNKVLIFAKSDIREILSEELSK 278
P E+++ IR + +A ++ +++ IL E +K
Sbjct: 1227 EPGGPQEPGLASSPPGRAPLSSCSELQVSQFIR-KHVASCLLVSDTSTELSYILPSEAAK 1285
Query: 279 RG---------------ITVLSLEIEEPSLEDVFLK 299
+G + + S + + +LE+VFLK
Sbjct: 1286 KGAFERLFQHLERSLDALHLSSFGLMDTTLEEVFLK 1321
>gb|AAG34388.1|AF197468_4 (AF197468) ATP/GTP binding protein; NosF [Pseudomonas fluorescens]
Length = 305
Score = 150 bits (374), Expect = 3e-35
Identities = 82/223 (36%), Positives = 130/223 (57%), Gaps = 6/223 (2%)
Query: 1 MKVIEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSV 60
M V+EIE +++ YG + L L + +G + G G NGAGKTTT+ +LG++ G V
Sbjct: 1 MNVVEIEGVSQRYGDVAVLRGLDLTLAQGEVLGLFGHNGAGKTTTMKLILGLLRASEGEV 60
Query: 61 RLLGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLK 120
R+ G ++ + LG+LPEN Y +L+ L FA K +++E LL+
Sbjct: 61 RVFGRAPSDPSVR--QMLGYLPENVMFYPQLSGLETLRHFARL----KGAAPEQVERLLE 114
Query: 121 LVGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQ 180
VGL R+V+++SKGM+QRL LAQAL+ P LL+LDEPT GLDP + + ++
Sbjct: 115 EVGLAGAARRRVRTYSKGMRQRLGLAQALLGQPRLLLLDEPTVGLDPIATQDLYQLLDRL 174
Query: 181 KKQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKK 223
+ QG ++ SH+L VE ++ I+ +G+L +G+L +++
Sbjct: 175 RWQGTSIILCSHVLPGVEAHINRAAILTRGRLLALGSLARLRE 217
>gb|AAG32068.1|AF317790_1 (AF317790) ATP-binding transporter AviABCI [Streptomyces
viridochromogenes]
Length = 323
Score = 149 bits (373), Expect = 3e-35
Identities = 95/310 (30%), Positives = 157/310 (50%), Gaps = 20/310 (6%)
Query: 7 ENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSVRLLGYD 66
E L K+YG A+D L V +G + LGPNGAGKTT + + ++ PD G + G D
Sbjct: 12 EGLRKTYGSETALDGFDLVVPEGTVCALLGPNGAGKTTAVRILSTLLKPDGGRALVAGLD 71
Query: 67 IFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLKLVGLWD 126
+ +E + + +G + + E LT NL+ + Y++ ++E ++R EELL+ L +
Sbjct: 72 VTREAAEVRRNIGVTGQYPAVEEILTGRENLEMWGRLYHVGRREAQRRTEELLEQFDLTE 131
Query: 127 VRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQKKQGKT 186
+++K +S GM++RL LA P++L LDEPT+GLDP+ V ++ +QG T
Sbjct: 132 AADKRLKHYSGGMRRRLDLAAGFFTVPKVLFLDEPTTGLDPRNRNEVWKMVRSMVEQGTT 191
Query: 187 VFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKK---------QYMELEGYEIKVET 237
V ++ L E + LAD++ +I G+ GT E +K E
Sbjct: 192 VLLTTQYLEEADRLADQISVIDAGRGVVEGTPETLKSLVGGDRIVVTLAATEDLSAAAAQ 251
Query: 238 KQPF----PEIELPDVIRIEKIADNKVLIFAKSDIREILSEELSKRGITVLSLEIEEPSL 293
F PE++ + RI+ ++V D+ EI+ + L +G V+ + + P+L
Sbjct: 252 VARFTGTEPEVDA-EARRIDAPVRDRV-----GDLVEIV-QLLRGQGHGVVDVSLRRPTL 304
Query: 294 EDVFLKTIYR 303
+DVFL R
Sbjct: 305 DDVFLHATNR 314
>pir||E70337 ABC transporter - Aquifex aeolicus >gi|2983089|gb|AAC06695.1|
(AE000689) ABC transporter [Aquifex aeolicus]
Length = 238
Score = 149 bits (373), Expect = 3e-35
Identities = 85/221 (38%), Positives = 130/221 (58%), Gaps = 2/221 (0%)
Query: 3 VIEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSVRL 62
++E+ + KS+ K K + SL V KG I G LGPNGAGKTT S++G I D G V L
Sbjct: 1 MLEVREVEKSFKKKKVLKGGSLSVNKGEIVGLLGPNGAGKTTLFNSIIGFISVDKGKVLL 60
Query: 63 LGYDIFKEPI--KAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLK 120
G D+ P +A++ L FLP+ T++E+LT NL F F+ K+E + E LL+
Sbjct: 61 DGEDVTHLPPFKRAQKGLAFLPQEHTLFEDLTVLENLLIFLEFFTDSKEEAITKAEALLE 120
Query: 121 LVGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQ 180
GL +++ +K + S G K+RL +A++LI P+ ++LDEP +GLDP +++I+
Sbjct: 121 DFGLLELKDQKAYALSGGQKRRLEIARSLITTPKYVLLDEPFAGLDPIIVSEIREIVKNL 180
Query: 181 KKQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEI 221
K G V + H + E ++ D+V II +GK+ G EE+
Sbjct: 181 KNNGIGVLITDHNVRETIKMVDRVYIISEGKVLAHGKPEEV 221
>gb|AAK41557.1| Antibiotic ABC transporter, ATP binding protein [Sulfolobus
solfataricus]
Length = 297
Score = 148 bits (371), Expect = 6e-35
Identities = 95/303 (31%), Positives = 174/303 (57%), Gaps = 13/303 (4%)
Query: 3 VIEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSVRL 62
+I + N+ K YG A+DN+SLEV+K +GPNGAGKTT I +L ++ PD G V++
Sbjct: 1 MIVVSNIVKKYGNKIALDNVSLEVKKREFVSLIGPNGAGKTTLIRILLTLMKPDRGEVQI 60
Query: 63 LGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLKLV 122
LG + FK KE +G++ E LT + L+ A + K E + +L+ V
Sbjct: 61 LGENPFKSKRIFKE-VGYVQEIPNYPPFLTGKQVLELSAKIRGVDKSE----VNRVLEFV 115
Query: 123 GLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILE-QK 181
+ + + +SKGM QR+ +A+AL+ +P +LI+DEP G+DP + ++++ + ++
Sbjct: 116 EMENYANNPIVKYSKGMVQRIAIAEALLGNPSILIMDEPNMGIDPIFSLKTRELLNKLKR 175
Query: 182 KQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYEIKVETKQ-P 240
K ++ +SH L +V++L+D++ +I KGK+ GT+E++ K+++ G ++ VET +
Sbjct: 176 KDNVSILMTSHELEDVKKLSDRIFMIYKGKIVFSGTVEDMVKEFL---GIQVVVETDEIE 232
Query: 241 FPEIELPDVIRIEKIAD--NKVLIFAKSDIREILSEELSKRGITVLSLEIEEPSLEDVFL 298
E L + ++ I + N+++ D RE L ++L G+ V I + +LE+ ++
Sbjct: 233 KAEGVLKGIEYVKGIFNDGNRLIAKLNEDRREELLKDLVTSGVKVKGFYI-DLNLEEAYM 291
Query: 299 KTI 301
+ +
Sbjct: 292 RAL 294
>pir||S72783 probable ABC-type transport protein B1496_F3_97 - Mycobacterium
leprae >gi|466902|gb|AAA17147.1| (U00013) abc2;
B1496_F3_97 [Mycobacterium leprae]
>gi|2398710|emb|CAB16175.1| (Z99125) ABC-type
transporter [Mycobacterium leprae]
Length = 315
Score = 148 bits (371), Expect = 6e-35
Identities = 100/311 (32%), Positives = 157/311 (50%), Gaps = 20/311 (6%)
Query: 3 VIEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSVRL 62
VI + + K YG AV NL L++ + LGPNGAGKTTT+ G + PD+G++ +
Sbjct: 14 VIRLRGVCKHYGSILAVSNLDLDIHSAEVLALLGPNGAGKTTTVEMCEGFVRPDAGTIEV 73
Query: 63 LGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLKLV 122
LG D + + + R+G + + Y A L+ AS+ P E LL+ +
Sbjct: 74 LGLDPITDNARLRARIGVMLQGGGGYPAARAGEMLNLVASYAADPLDP-----EWLLETL 128
Query: 123 GLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQKK 182
GL DV + S G +QRL LA L+ PEL+ LDEPT+G+D LV ++I ++
Sbjct: 129 GLTDVARTTYRRLSGGQQQRLALACTLVGRPELVFLDEPTAGMDTHARLLVWELIDTLRR 188
Query: 183 QGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYEIKVETKQPFP 242
G TV ++H L E EELAD++ II G++ GT E+ G + ++ P P
Sbjct: 189 DGVTVVLTTHQLKEAEELADRLVIIDHGRMIAAGTPTELMH-----TGAKDQLRFSAP-P 242
Query: 243 EIE-------LPDVIRIEKIADNKVLIFAKSDIREILSEELSKRGITVL--SLEIEEPSL 293
++ LP+ + ++ + L+ D + + + I VL ++ +E+ SL
Sbjct: 243 RLDLSLLAFALPEDYKTTELTPGEYLVAGPIDPQVLATVTAWCAQINVLTTNMRVEQHSL 302
Query: 294 EDVFLKTIYRR 304
EDVFL R+
Sbjct: 303 EDVFLDLTGRK 313
>sp|P26050|NODI_BRAJA NODULATION ATP-BINDING PROTEIN I >gi|281683|pir||S27496 nodI
protein - Bradyrhizobium japonicum
>gi|152117|gb|AAA26229.1| (J03685) nodI gene product
[Bradyrhizobium japonicum]
Length = 306
Score = 148 bits (370), Expect = 7e-35
Identities = 95/296 (32%), Positives = 151/296 (50%), Gaps = 5/296 (1%)
Query: 4 IEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSVRLL 63
I++ + KS+G V++LS V +G FG LGPNGAGK+T +LG+I PD G + +L
Sbjct: 8 IDLVGVRKSFGDKVIVNDLSFSVARGECFGLLGPNGAGKSTIARMLLGMISPDRGKITVL 67
Query: 64 GYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLKLVG 123
+ A+ +G +P+ + E T NL F ++ + + E + LL+
Sbjct: 68 DEPVPSRARAARVAVGVVPQFDNLEPEFTVRENLLVFGRYFGMSARTIEAVVPSLLEFAR 127
Query: 124 LWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQKKQ 183
L +V S GMK+RL LA+ALINDP LL++DEPT+GLDP L+ + + +
Sbjct: 128 LESKADVRVSLLSGGMKRRLTLARALINDPHLLVMDEPTTGLDPHARHLIWERLRALLAR 187
Query: 184 GKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYEIKVETKQPFPE 243
GKT+ ++H + E E L D++ ++ G G + + +++ EI E
Sbjct: 188 GKTILLTTHFMEEAERLCDRLCVLESGCKIAEGKPDALIDEHIGCNVIEIYGGDLDQLRE 247
Query: 244 IELPDVIRIEKIADNKVLIFAKSDIREILSEELSKRGITVLSLEIEEPSLEDVFLK 299
+ P IE + +F + + +S L RG T L + P+LEDVFL+
Sbjct: 248 LIRPYARHIEVSGET---LFCYARCPDEISVHL--RGRTDLRVLQRPPNLEDVFLR 298
>pir||B75459 sodium extrusion protein NatA - Deinococcus radiodurans (strain
R1) >gi|6458650|gb|AAF10504.1|AE001945_8 (AE001945)
sodium extrusion protein NatA [Deinococcus radiodurans]
Length = 244
Score = 148 bits (370), Expect = 7e-35
Identities = 75/219 (34%), Positives = 131/219 (59%)
Query: 3 VIEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSVRL 62
+++I++L+KSYG F+A+ +++ G +FG LGPNGAGKTT + + ++ P SGSV +
Sbjct: 1 MLDIQHLSKSYGSFQALRDVTFSARDGEVFGLLGPNGAGKTTLLRILATLLSPTSGSVTV 60
Query: 63 LGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLKLV 122
G D ++ + ++G + + LT L FA+ Y++ + + E RI EL +
Sbjct: 61 AGLDTQRDAEAVRRQIGVVNGGMGLPARLTGREVLRSFAALYDMGRAQTEARIAELDDRL 120
Query: 123 GLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQKK 182
L + +S GMKQ++++A+A+I DP +L+LDE SGLD R + D + + +
Sbjct: 121 ELGRTLDTRAGEYSTGMKQKVIIARAVIQDPAVLVLDEAASGLDIFARRTLLDFVAQTRA 180
Query: 183 QGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEI 221
G+ +S+H++SE EE+ D+V I+ +G+L + T+ I
Sbjct: 181 PGRLTLYSTHVMSEAEEVCDRVAILHQGELVALDTIPAI 219
>sp|P55339|ECSA_BACSU ABC-TYPE TRANSPORTER ATP-BINDING PROTEIN ECSA
>gi|7445744|pir||F69619 ABC transporter (ATP-binding
protein) ecsA - Bacillus subtilis
>gi|1177253|emb|CAA61074.1| (X87807) putative
ATP-binding protein of ABC-type [Bacillus subtilis]
>gi|2226115|emb|CAA74409.1| (Y14077) Hypothetical
protein [Bacillus subtilis] >gi|2633340|emb|CAB12844.1|
(Z99109) ABC transporter (ATP-binding protein) [Bacillus
subtilis]
Length = 247
Score = 148 bits (369), Expect = 1e-34
Identities = 79/225 (35%), Positives = 128/225 (56%)
Query: 1 MKVIEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSV 60
M ++ +++LT Y + + N+S +E I G +G NGAGK+TTI ++G++ P GS+
Sbjct: 1 MSLLSVKDLTGGYTRNPVLKNVSFTLEPNQIVGLIGLNGAGKSTTIRHIIGLMDPHKGSI 60
Query: 61 RLLGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLK 120
L G ++P + + ++PE +YEELT +L+ A Y + K+ EKR+ LLK
Sbjct: 61 ELNGKTFAEDPEGYRSQFTYIPETPVLYEELTLMEHLELTAMAYGLSKETMEKRLPPLLK 120
Query: 121 LVGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQ 180
+ FSKGMKQ++++ A + +P L I+DEP GLDP + + + E
Sbjct: 121 EFRMEKRLKWFPAHFSKGMKQKVMIMCAFLAEPALYIIDEPFLGLDPLAINALLERMNEA 180
Query: 181 KKQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQY 225
KK G +V S+HIL+ E D I+ G++R GTL E+++Q+
Sbjct: 181 KKGGASVLMSTHILATAERYCDSFIILHNGEVRARGTLSELREQF 225
>gb|AAK42130.1| Antibiotic ABC transporter ATP binding protein [Sulfolobus
solfataricus]
Length = 297
Score = 147 bits (368), Expect = 1e-34
Identities = 90/303 (29%), Positives = 176/303 (57%), Gaps = 13/303 (4%)
Query: 3 VIEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSVRL 62
+I + ++ K YG A+DN+SLEV+KG +GPNGAGKTT I +L ++ PD G V++
Sbjct: 1 MIVVSSIVKKYGNKIALDNISLEVKKGEFVSLIGPNGAGKTTLIRILLTLMKPDKGEVQI 60
Query: 63 LGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLKLV 122
LG + F+ + + +G++ E LT + L+ A + K E ++ +L+ V
Sbjct: 61 LGENPFRNK-RIFKAIGYVQEIPNYPPFLTGRQVLELSAKIRGVDKSE----VKRVLEFV 115
Query: 123 GLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILE-QK 181
+ + + +SKGM QR+ +A++L+ +P +LI+DEP G+DP + ++++ + ++
Sbjct: 116 EMENYANSPIIKYSKGMVQRIAIAESLLGNPSILIMDEPNMGIDPIFSLKTRELLNKLKR 175
Query: 182 KQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYEIKVETKQ-P 240
K ++ +SH L +V++L+D++ +I KGK+ GT+E++ K+++ G ++ VET +
Sbjct: 176 KDNVSILMTSHELEDVKKLSDRIFMIYKGKIVFSGTVEDMIKEFL---GIQVIVETDEIE 232
Query: 241 FPEIELPDVIRIEKIAD--NKVLIFAKSDIREILSEELSKRGITVLSLEIEEPSLEDVFL 298
E L + ++ + + N++++ D RE L +L G+ V I + +LE+ ++
Sbjct: 233 NAEEALKGIEYVKGVFNDGNRLIVKLNEDRREDLLRDLVTSGVKVKGFYI-DLNLEEAYM 291
Query: 299 KTI 301
+ +
Sbjct: 292 RAL 294
>sp|P08720|NODI_RHILV NODULATION ATP-BINDING PROTEIN I >gi|78028|pir||A24400 nodulation
protein nodI - Rhizobium leguminosarum
>gi|46214|emb|CAA68618.1| (Y00548) nodI [Rhizobium
leguminosarum] >gi|225122|prf||1209215A gene nodI
[Rhizobium leguminosarum]
Length = 311
Score = 147 bits (367), Expect = 2e-34
Identities = 95/296 (32%), Positives = 152/296 (51%), Gaps = 5/296 (1%)
Query: 4 IEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSVRLL 63
I++ ++KSYG V++LS + G FG LGPNGAGK+T +LG+ P G + +L
Sbjct: 13 IDLAGVSKSYGGKIVVNDLSFTIAAGECFGLLGPNGAGKSTITRMILGMTSPSVGKITVL 72
Query: 64 GYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLKLVG 123
G + A+ ++G + + + E T NL + ++ + +E E I LL+
Sbjct: 73 GAQEPGQVRLARAKIGIVSQFDNLDLEFTVRENLLVYGRYFRMSTREIETVIPSLLEFAR 132
Query: 124 LWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQKKQ 183
L +V S GMK+RL LA ALINDP+LLILDEPT+GLDP L+ + + +
Sbjct: 133 LESKANTRVADLSGGMKRRLTLAGALINDPQLLILDEPTTGLDPHARHLIWERLRSLLAR 192
Query: 184 GKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYEIKVETKQPFPE 243
GKT+ ++HI+ E E L D++ ++ G+ G + ++ + EI Q
Sbjct: 193 GKTILLTTHIMEEAERLCDRLCVLEAGRKIAEGRPHALIEEQIGCPVIEIYGGDPQELSL 252
Query: 244 IELPDVIRIEKIADNKVLIFAKSDIREILSEELSKRGITVLSLEIEEPSLEDVFLK 299
+ P+ R+E + L D ++ ++ R + L L P+LEDVFL+
Sbjct: 253 LIRPNARRLE--ISGETLFCYTPDPEQVRAQ---LRAYSNLRLLERPPNLEDVFLR 303
>pir||T07717 probable ABC-type transport protein T23J7.110 - Arabidopsis
thaliana >gi|4741195|emb|CAB41861.1| (AL049746) ABC
transporter-like protein [Arabidopsis thaliana]
Length = 900
Score = 147 bits (367), Expect = 2e-34
Identities = 94/294 (31%), Positives = 160/294 (53%), Gaps = 11/294 (3%)
Query: 18 AVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSVRLLGYDIFKEPIKAKER 77
AV LSL V G FG LGPNGAGKT+ I M G++ P SG+ + G DI + +
Sbjct: 598 AVRGLSLAVPSGECFGMLGPNGAGKTSFINMMTGLLKPTSGTALVQGLDICNDMDRVYTS 657
Query: 78 LGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLKLVGLW--DVRYRKVKSF 135
+G P++ ++E LT +L F+ N+ + + +EE LK V L+ V + +
Sbjct: 658 MGVCPQHDLLWETLTGREHLLFYGRLKNLKGADLNQAVEESLKSVNLFHGGVADKPAGKY 717
Query: 136 SKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQKKQGKTVFFSSHILS 195
S GMK+RL +A +LI +P+++ +DEP++GLDP + + +I ++ KQ + ++H +
Sbjct: 718 SGGMKRRLSVAISLIGNPKVVYMDEPSTGLDPASRKNLWTVI-KRAKQNTAIILTTHSME 776
Query: 196 EVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYEIKVETKQPFPEIEL-----PDVI 250
E E L D++GI V G L+ +G +E+K +Y + + ++ +L P+
Sbjct: 777 EAEFLCDRLGIFVDGGLQCIGNPKELKGRYGGSYVFTMTTSSEHEQNVEKLIKDVSPNAK 836
Query: 251 RIEKIADNKVLIFAKSDIR--EIL-SEELSKRGITVLSLEIEEPSLEDVFLKTI 301
+I IA + K ++R E+ + E +K TV + + + +LEDVF+K +
Sbjct: 837 KIYHIAGTQKFELPKEEVRISEVFQAVEKAKSNFTVFAWGLADTTLEDVFIKVV 890
>emb|CAC08315.1| (AL392149) putative ABC transport system ATP-binding protein
[Streptomyces coelicolor A3(2)]
Length = 336
Score = 147 bits (367), Expect = 2e-34
Identities = 96/309 (31%), Positives = 159/309 (51%), Gaps = 20/309 (6%)
Query: 4 IEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSVRLL 63
+ E L K YG +A+D L V +G + G LGPNGAGKTT + + +I D G +
Sbjct: 7 VRAEGLEKRYGDKRALDGFDLTVREGTVHGLLGPNGAGKTTAVRILSTLIRLDGGRAEVA 66
Query: 64 GYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLKLVG 123
G DI ++ + + R+G + A + E LT +NL+ F +++ + R ELL+
Sbjct: 67 GLDIARQAREVRARIGLTGQYAAVDEVLTGRQNLEMFGRLFHLGGRRARARAVELLEQFD 126
Query: 124 LWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQKKQ 183
L D R V +S GM++RL LA ++I P +L LDEPT+GLDP+ V + + E
Sbjct: 127 LTDAADRGVGKYSGGMRRRLDLAASMILAPSVLFLDEPTTGLDPRSRGEVWESVRELVAS 186
Query: 184 GKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKK-------QYMELEGYEIKVE 236
G TV ++ L E ++LA ++ +I +G+ T + +K + + + EI
Sbjct: 187 GTTVLLTTQYLEEADKLASRITVIDRGRAIADDTPDGLKNLVGGDRIEVVVADHAEIPRV 246
Query: 237 TK------QPFPEIELPDVIRIEKIADNKVLIFAKSDIREILSEELSKRGITVLSLEIEE 290
K + PE+E + +R+ ++V A +++ L +E G+ V + +
Sbjct: 247 VKTVARVCKGEPEVE-EEALRVHAPVTDRVP--ALTEVARTLQDE----GVAVEDIGLRR 299
Query: 291 PSLEDVFLK 299
PSL+DVFL+
Sbjct: 300 PSLDDVFLR 308
>pir||S73019 daunorubicin resistance protein drrA - Mycobacterium leprae
>gi|467205|gb|AAA17362.1| (U00023) drrA; L518_F2_43
[Mycobacterium leprae]
Length = 331
Score = 146 bits (365), Expect = 3e-34
Identities = 89/307 (28%), Positives = 159/307 (50%), Gaps = 10/307 (3%)
Query: 2 KVIEIENLTKSYGKFK--AVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGS 59
K + + + K+YGK K A+D++S +V++G + G LGPNGAGKTT + + + PD G
Sbjct: 6 KAVMVRGVRKTYGKGKIIALDDVSFDVDRGEVIGLLGPNGAGKTTMVDILSTLTRPDRGL 65
Query: 60 VRLLGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELL 119
+ GYD+ EP + + + + ++L+ +NL F Y + K R +ELL
Sbjct: 66 ATVAGYDVVSEPAGVRRSIMVTGQQVAVDDQLSGEQNLILFGRLYGLSKSVARVRTQELL 125
Query: 120 KLVGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILE 179
+ L R+V ++S GM++R+ +A L+ P++ LDEPT+GLDP+ + + D++
Sbjct: 126 EQFDLLHAGKRRVGTYSGGMRRRIDIACGLVVQPQVAFLDEPTTGLDPRSRQAIWDLVAS 185
Query: 180 QKKQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIK----KQYMELEGYEIK- 234
K+ G ++ L E +EL+D++ +I G + GT E+K + + E+ ++K
Sbjct: 186 FKQIGIATLLTTQYLEEADELSDRIILIDHGTVIAEGTASELKHRVGETFCEIVPRDLKD 245
Query: 235 VETKQPFPEIELPDVIRIEKIADNKVLIFAKSDIREILSE---ELSKRGITVLSLEIEEP 291
+ T LP+ R + + D + L E + + + + + + P
Sbjct: 246 LGTVVAALGSLLPERSRAMLTPTSDRITMPAPDGTQTLIEAARRIDEVSVELADIALRRP 305
Query: 292 SLEDVFL 298
SL+DVFL
Sbjct: 306 SLDDVFL 312
>sp|P41234|ABC2_MOUSE ATP-BINDING CASSETTE TRANSPORTER 2 >gi|1082239|pir||B54774 ATP
binding cassette transporter ABC2 - mouse (fragment)
>gi|495259|emb|CAA53531.1| (X75927) abc2 [Mus musculus]
Length = 1472
Score = 146 bits (365), Expect = 3e-34
Identities = 83/240 (34%), Positives = 144/240 (59%), Gaps = 6/240 (2%)
Query: 3 VIEIENLTKSYGKFK--AVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSV 60
V+ ++ LTK Y K A++ LSL + + + FLG NGAGKTTT+ + G+ P SGS
Sbjct: 26 VVCVDKLTKVYKNDKKLALNKLSLNLYENQVVSFLGHNGAGKTTTMSILTGLFPPTSGSA 85
Query: 61 RLLGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLK 120
+ G+DI E + ++ LG P++ +++ LT +L F++ ++ ++E K +++++
Sbjct: 86 TIYGHDIRTEMDEIRKNLGMCPQHNVLFDRLTVEEHLWFYSRLKSMAQEEIRKETDKMIE 145
Query: 121 LVGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQ 180
+ L + R+ V++ S GMK++L +A A + +ILDEPT+G+DP R + D+IL+
Sbjct: 146 DLELSNKRHSLVQTLSGGMKRKLSVAIAFVGGSRAIILDEPTAGVDPYARRAIWDLILKY 205
Query: 181 KKQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYEIKVETKQP 240
K G+T+ S+H + E + L D++ II GKL+ G+ +K Y +GY + + KQP
Sbjct: 206 -KPGRTILLSTHHMDEADLLGDRIAIISHGKLKCCGSPLFLKGAY--XDGYRLTL-VKQP 261
Score = 139 bits (348), Expect = 3e-32
Identities = 97/315 (30%), Positives = 164/315 (51%), Gaps = 20/315 (6%)
Query: 3 VIEIENLTKSY-----GKFKAVDNLSLEV-EKGIIFGFLGPNGAGKTTTILSMLGIIIPD 56
+++IENLTK Y G+ AVD L L V G FG LG NGAGKT+T + G
Sbjct: 1087 MVKIENLTKVYKSRKIGRILAVDRLCLGVCVPGECFGLLGVNGAGKTSTFKMLTGDESTT 1146
Query: 57 SGSVRLLGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIE 116
G + G+ + K+ ++ ++ LG+ P+ +ELTA +L + IP +++ + ++
Sbjct: 1147 GGEAFVNGHSVLKDLLQVQQSLGYCPQFDVPVDELTAREHLQLYTRLRCIPWKDEAQVVK 1206
Query: 117 ELLKLVGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDI 176
L+ + L + ++S G K++L A ALI P + LDEPT+G+DP+ R + ++
Sbjct: 1207 WALEKLELTKYADKPAGTYSGGNKRKLSTAIALIGYPAFIFLDEPTTGMDPKARRFLWNL 1266
Query: 177 ILEQKKQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYEIKVE 236
IL+ K G++V +SH + E E L ++ I+V G+L +G+++ +K ++ +GY I V
Sbjct: 1267 ILDLIKTGRSVVLTSHSMEECEALCTRLAIMVNGRLHCLGSIQHLKNRFG--DGYMITVR 1324
Query: 237 TKQPFPEIELPDVIRI------EKIADNKVLIFAKSDIRE---ILSEELSKRGITVLSLE 287
TK + DV+R E A K + ++ L++ SK V L
Sbjct: 1325 TKS---SQNVKDVVRFFNRNFPEAHAQGKTPYKVQYQLKSEHISLAQVFSKMEQVVGVLG 1381
Query: 288 IEEPSLEDVFLKTIY 302
IE+ S+ L ++
Sbjct: 1382 IEDYSVSQTTLDNVF 1396
>pir||T07713 probable ABC-type transport protein T23J7.70 - Arabidopsis thaliana
>gi|4741191|emb|CAB41857.1| (AL049746) ABC
transporter-like protein [Arabidopsis thaliana]
Length = 925
Score = 146 bits (365), Expect = 3e-34
Identities = 97/297 (32%), Positives = 163/297 (54%), Gaps = 19/297 (6%)
Query: 17 KAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSVRLLGYDIFKEPIKAKE 76
KAV LSL V G FG LGPNGAGKT+ I M G++ P SG+ + G DI K+ +
Sbjct: 622 KAVRVLSLAVPSGECFGMLGPNGAGKTSFINMMTGLVKPTSGAAFVQGLDICKDMDRVYT 681
Query: 77 RLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLKLVGLW--DVRYRKVKS 134
+G P++ ++E LT +L F+ N+ + + +EE L+ V L+ V +
Sbjct: 682 SMGVCPQHDLLWETLTGREHLLFYGRLKNLKGVDLNQAVEESLRSVNLFHGGVADKPAGK 741
Query: 135 FSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQKKQGKTVFFSSHIL 194
+S GMK+RL +A +LI +P+++ +DEP++GLDP + + +I + K+ + ++H +
Sbjct: 742 YSGGMKRRLSVAISLIGNPKVVYMDEPSTGLDPASRKNLWTVI-KNAKRHTAIILTTHSM 800
Query: 195 SEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYEIKVETKQPF-PEIEL------P 247
E E L D++GI V G+L+ +G +E+K +Y Y + + T ++E+ P
Sbjct: 801 EEAEFLCDRLGIFVDGRLQCIGNPKELKGRYG--GSYVLTMTTSSEHEKDVEMLVQEVSP 858
Query: 248 DVIRIEKIADNKVLIFAKSDIREILSE-----ELSKRGITVLSLEIEEPSLEDVFLK 299
+V +I IA + K ++R +SE E +K V + + + +LEDVF+K
Sbjct: 859 NVKKIYHIAGTQKFEIPKDEVR--ISEVFQVVEKAKSNFKVFAWGLADTTLEDVFIK 913
>pir||C72336 ABC transporter, ATP-binding protein - Thermotoga maritima (strain
MSB8) >gi|4981293|gb|AAD35847.1|AE001746_8 (AE001746)
ABC transporter, ATP-binding protein [Thermotoga
maritima]
Length = 265
Score = 145 bits (363), Expect = 5e-34
Identities = 99/266 (37%), Positives = 141/266 (52%), Gaps = 27/266 (10%)
Query: 1 MKVIEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSV 60
M ++ +++L K YG+ AVD +S EVEKG IF LGPNGAGKTTT+ + G+ DSG +
Sbjct: 1 MMILRVKDLKKFYGEKAAVDGISFEVEKGEIFAILGPNGAGKTTTLKCITGLRKKDSGEI 60
Query: 61 RLLGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLK 120
L G +LPE +Y L +D F I K EK ELL+
Sbjct: 61 ELNG------------TFTYLPEEKKLYPYLRVKEIIDLFKK---IGKNFNEKNCLELLE 105
Query: 121 LVGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQ 180
+ D+ KV + S GM+ L L+ L + +L ILDEPT GLDP + D I
Sbjct: 106 RFRI-DLN-EKVTNLSHGMRTILYLSLVLSENVDLYILDEPTWGLDPIVRNEILDRIRSL 163
Query: 181 KKQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQY------MELEGYEIK 234
+GK+V ++SH+L+EVE++AD+V I+ +GK+ G L++IK Y L GY +K
Sbjct: 164 TFEGKSVLYTSHVLAEVEKIADRVAIMKEGKIILTGNLDDIKSSYGLVVSRENLNGYLLK 223
Query: 235 V----ETKQPFPEIELPDVIRIEKIA 256
E + E P+ ++IE A
Sbjct: 224 TLKSGEKVYLVKKEEAPEGVKIEDAA 249
>pir||C75593 probable ABC transporter, ATP-binding protein - Deinococcus
radiodurans (strain R1)
>gi|6460585|gb|AAF12291.1|AE001862_117 (AE001862) ABC
transporter, ATP-binding protein, putative [Deinococcus
radiodurans]
Length = 301
Score = 145 bits (363), Expect = 5e-34
Identities = 91/298 (30%), Positives = 156/298 (51%), Gaps = 13/298 (4%)
Query: 3 VIEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSVRL 62
+ E ++K+YG A+ + +L + G + LGPNGAGK+T I +LG+ P +G VR+
Sbjct: 2 ITTFEQVSKTYGHVTALSDFNLTLRTGELTALLGPNGAGKSTAIGLLLGLSAPSAGQVRV 61
Query: 63 LGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLKLV 122
LG D + ++A R+G +P+ + + LT + FASFY P ++E L L
Sbjct: 62 LGADPRRNDVRA--RIGAMPQESALPAGLTVREAVTLFASFYPAPLG-----VDEALALA 114
Query: 123 GLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQKK 182
L V R+ S G K+RL A A++ DPELL++DEPT+G+D Q + + +
Sbjct: 115 DLGPVAGRRAAQLSGGQKRRLAFALAVVGDPELLLIDEPTTGMDAQSRAAFWEAVTGLRA 174
Query: 183 QGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYEIKVETKQPFP 242
+G+T+ ++H L E E AD+V ++ G++ T + ++ + G + +
Sbjct: 175 RGRTILLTTHYLEEAERTADRVVVMNGGRILADDTPQGLRS---GVGGARVSFVSDLVQA 231
Query: 243 EIE-LPDVIRIEKIADNKVLIFAKSDIREILSEELSKRGITVLSLEIEEPSLEDVFLK 299
E+E LP V ++ A + + ++ + E L L G T LE+ +LE+ +L+
Sbjct: 232 ELERLPGVSAVQVDAAGRADL--RTSVPEALLAALIGSGTTFSDLEVRRATLEEAYLQ 287
>gb|AAC05632.1| (AF001945) rim ABC transporter [Homo sapiens]
Length = 2273
Score = 145 bits (362), Expect = 6e-34
Identities = 96/305 (31%), Positives = 155/305 (50%), Gaps = 16/305 (5%)
Query: 3 VIEIENLTKSYG--KFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSV 60
++ + LTK Y AVD L + V G FG LG NGAGKTTT + G SG
Sbjct: 1937 ILRLHELTKIYPGTSSPAVDRLCVGVRPGECFGLLGVNGAGKTTTFKMLTGDTTVTSGDA 1996
Query: 61 RLLGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLK 120
+ G I + + +G+ P+ I E LT +L +A +P +E EK +K
Sbjct: 1997 TVAGKSILTNISEVHQNMGYCPQFDAIDELLTGREHLYLYARLRGVPAEEIEKVANWSIK 2056
Query: 121 LVGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQ 180
+GL ++S G K++L A ALI P L++LDEPT+G+DPQ R++ ++I+
Sbjct: 2057 SLGLTVYADCLAGTYSGGNKRKLSTAIALIGCPPLVLLDEPTTGMDPQARRMLWNVIVSI 2116
Query: 181 KKQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYEIKVETKQP 240
++G+ V +SH + E E L ++ I+VKG R +GT++ +K ++ +GY + ++ K P
Sbjct: 2117 IREGRAVVLTSHSMEECEALCTRLAIMVKGAFRCMGTIQHLKSKFG--DGYIVTMKIKSP 2174
Query: 241 FPEIELPDVIRIEKIADNKVLIFAKSDIREILSEELSKRGITVLSLEIEEPSLEDVFLKT 300
++ LPD+ +E+ F S RE R +L ++ SL +F
Sbjct: 2175 KDDL-LPDLNPVEQFFQGN---FPGSVQRE--------RHYNMLQFQVSSSSLARIFQLL 2222
Query: 301 IYRRD 305
+ +D
Sbjct: 2223 LSHKD 2227
Score = 132 bits (330), Expect = 4e-30
Identities = 73/214 (34%), Positives = 125/214 (58%), Gaps = 3/214 (1%)
Query: 6 IENLTKSYGKF--KAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSVRLL 63
++NL K + AVD L++ + I FLG NGAGKTTT+ + G++ P SG+V +
Sbjct: 931 VKNLVKIFEPCGRPAVDRLNITFYENQITAFLGHNGAGKTTTLSILTGLLPPTSGTVLVG 990
Query: 64 GYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLKLVG 123
G DI ++ LG P++ ++ LT ++ F+A ++E + +E +L+ G
Sbjct: 991 GRDIETSLDAVRQSLGMCPQHNILFHHLTVAEHMLFYAQLKGKSQEEAQLEMEAMLEDTG 1050
Query: 124 LWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQKKQ 183
L R + + S GM+++L +A A + D +++ILDEPTSG+DP R + D++L+ +
Sbjct: 1051 LHHKRNEEAQDLSGGMQRKLSVAIAFVGDAKVVILDEPTSGVDPYSRRSIWDLLLKY-RS 1109
Query: 184 GKTVFFSSHILSEVEELADKVGIIVKGKLRTVGT 217
G+T+ S+H + E + L D++ II +G+L GT
Sbjct: 1110 GRTIIMSTHHMDEADLLGDRIAIIAQGRLYCSGT 1143
>emb|CAA75729.1| (Y15635) ABCR [Homo sapiens]
Length = 2273
Score = 145 bits (362), Expect = 6e-34
Identities = 96/305 (31%), Positives = 155/305 (50%), Gaps = 16/305 (5%)
Query: 3 VIEIENLTKSY--GKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSV 60
++ + LTK Y AVD L + V G FG LG NGAGKTTT + G SG
Sbjct: 1937 ILRLHELTKIYLGTSSPAVDRLCVGVRPGECFGLLGVNGAGKTTTFKMLTGDTTVTSGDA 1996
Query: 61 RLLGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLK 120
+ G I + + +G+ P+ I E LT +L +A +P +E EK +K
Sbjct: 1997 TVAGKSILTNISEVHQNMGYCPQFDAIDELLTGREHLYLYARLRGVPAEEIEKVANWSIK 2056
Query: 121 LVGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQ 180
+GL ++S G K++L A ALI P L++LDEPT+G+DPQ R++ ++I+
Sbjct: 2057 SLGLTVYADCLAGTYSGGNKRKLSTAIALIGCPPLVLLDEPTTGMDPQARRMLWNVIVSI 2116
Query: 181 KKQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYEIKVETKQP 240
++G+ V +SH + E E L ++ I+VKG R +GT++ +K ++ +GY + ++ K P
Sbjct: 2117 IREGRAVVLTSHSMEECEALCTRLAIMVKGAFRCMGTIQHLKSKFG--DGYIVTMKIKSP 2174
Query: 241 FPEIELPDVIRIEKIADNKVLIFAKSDIREILSEELSKRGITVLSLEIEEPSLEDVFLKT 300
++ LPD+ +E+ F S RE R +L ++ SL +F
Sbjct: 2175 KDDL-LPDLNPVEQFFQGN---FPGSVQRE--------RHYNMLQFQVSSSSLARIFQLL 2222
Query: 301 IYRRD 305
+ +D
Sbjct: 2223 LSHKD 2227
Score = 132 bits (330), Expect = 4e-30
Identities = 73/214 (34%), Positives = 125/214 (58%), Gaps = 3/214 (1%)
Query: 6 IENLTKSYGKF--KAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSVRLL 63
++NL K + AVD L++ + I FLG NGAGKTTT+ + G++ P SG+V +
Sbjct: 931 VKNLVKIFEPCGRPAVDRLNITFYENQITAFLGHNGAGKTTTLSILTGLLPPTSGTVLVG 990
Query: 64 GYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLKLVG 123
G DI ++ LG P++ ++ LT ++ F+A ++E + +E +L+ G
Sbjct: 991 GRDIETSLDAVRQSLGMCPQHNILFHHLTVAEHMLFYAQLKGKSQEEAQLEMEAMLEDTG 1050
Query: 124 LWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQKKQ 183
L R + + S GM+++L +A A + D +++ILDEPTSG+DP R + D++L+ +
Sbjct: 1051 LHHKRNEEAQDLSGGMQRKLSVAIAFVGDAKVVILDEPTSGVDPYSRRSIWDLLLKY-RS 1109
Query: 184 GKTVFFSSHILSEVEELADKVGIIVKGKLRTVGT 217
G+T+ S+H + E + L D++ II +G+L GT
Sbjct: 1110 GRTIIMSTHHMDEADLLGDRIAIIAQGRLYCSGT 1143
>sp|P78363|ABCR_HUMAN RETINAL-SPECIFIC ATP-BINDING CASSETTE TRANSPORTER (RIM ABC
TRANSPORTER) (RIM PROTEIN) (RMP) (STARGARDT DISEASE
PROTEIN)
Length = 2273
Score = 145 bits (362), Expect = 6e-34
Identities = 96/305 (31%), Positives = 155/305 (50%), Gaps = 16/305 (5%)
Query: 3 VIEIENLTKSYG--KFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSV 60
++ + LTK Y AVD L + V G FG LG NGAGKTTT + G SG
Sbjct: 1937 ILRLHELTKIYPGTSSPAVDRLCVGVRPGECFGLLGVNGAGKTTTFKMLTGDTTVTSGDA 1996
Query: 61 RLLGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLK 120
+ G I + + +G+ P+ I E LT +L +A +P +E EK +K
Sbjct: 1997 TVAGKSILTNISEVHQNMGYCPQFDAIDELLTGREHLYLYARLRGVPAEEIEKVANWSIK 2056
Query: 121 LVGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQ 180
+GL ++S G K++L A ALI P L++LDEPT+G+DPQ R++ ++I+
Sbjct: 2057 SLGLTVYADCLAGTYSGGNKRKLSTAIALIGCPPLVLLDEPTTGMDPQARRMLWNVIVSI 2116
Query: 181 KKQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYEIKVETKQP 240
++G+ V +SH + E E L ++ I+VKG R +GT++ +K ++ +GY + ++ K P
Sbjct: 2117 IREGRAVVLTSHSMEECEALCTRLAIMVKGAFRCMGTIQHLKSKFG--DGYIVTMKIKSP 2174
Query: 241 FPEIELPDVIRIEKIADNKVLIFAKSDIREILSEELSKRGITVLSLEIEEPSLEDVFLKT 300
++ LPD+ +E+ F S RE R +L ++ SL +F
Sbjct: 2175 KDDL-LPDLNPVEQFFQGN---FPGSVQRE--------RHYNMLQFQVSSSSLARIFQLL 2222
Query: 301 IYRRD 305
+ +D
Sbjct: 2223 LSHKD 2227
Score = 132 bits (330), Expect = 4e-30
Identities = 73/214 (34%), Positives = 125/214 (58%), Gaps = 3/214 (1%)
Query: 6 IENLTKSYGKF--KAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSVRLL 63
++NL K + AVD L++ + I FLG NGAGKTTT+ + G++ P SG+V +
Sbjct: 931 VKNLVKIFEPCGRPAVDRLNITFYENQITAFLGHNGAGKTTTLSILTGLLPPTSGTVLVG 990
Query: 64 GYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLKLVG 123
G DI ++ LG P++ ++ LT ++ F+A ++E + +E +L+ G
Sbjct: 991 GRDIETSLDAVRQSLGMCPQHNILFHHLTVAEHMLFYAQLKGKSQEEAQLEMEAMLEDTG 1050
Query: 124 LWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQKKQ 183
L R + + S GM+++L +A A + D +++ILDEPTSG+DP R + D++L+ +
Sbjct: 1051 LHHKRNEEAQDLSGGMQRKLSVAIAFVGDAKVVILDEPTSGVDPYSRRSIWDLLLKY-RS 1109
Query: 184 GKTVFFSSHILSEVEELADKVGIIVKGKLRTVGT 217
G+T+ S+H + E + L D++ II +G+L GT
Sbjct: 1110 GRTIIMSTHHMDEADLLGDRIAIIAQGRLYCSGT 1143
>gi|11421340 ATP-binding cassette, sub-family A member 4 [Homo sapiens]
Length = 2300
Score = 145 bits (362), Expect = 6e-34
Identities = 96/305 (31%), Positives = 155/305 (50%), Gaps = 16/305 (5%)
Query: 3 VIEIENLTKSYG--KFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSV 60
++ + LTK Y AVD L + V G FG LG NGAGKTTT + G SG
Sbjct: 1964 ILRLHELTKIYPGTSSPAVDRLCVGVRPGECFGLLGVNGAGKTTTFKMLTGDTTVTSGDA 2023
Query: 61 RLLGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLK 120
+ G I + + +G+ P+ I E LT +L +A +P +E EK +K
Sbjct: 2024 TVAGKSILANISEVHQNMGYCPQFDAIDELLTGREHLYLYARLRGVPAEEIEKVANWSIK 2083
Query: 121 LVGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQ 180
+GL ++S G K++L A ALI P L++LDEPT+G+DPQ R++ ++I+
Sbjct: 2084 SLGLTVYADCLAGTYSGGNKRKLSTAIALIGCPPLVLLDEPTTGMDPQARRMLWNVIVSI 2143
Query: 181 KKQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYEIKVETKQP 240
++G+ V +SH + E E L ++ I+VKG R +GT++ +K ++ +GY + ++ K P
Sbjct: 2144 IREGRAVVLTSHSMEECEALCTRLAIMVKGAFRCMGTIQHLKSKFG--DGYIVTMKIKSP 2201
Query: 241 FPEIELPDVIRIEKIADNKVLIFAKSDIREILSEELSKRGITVLSLEIEEPSLEDVFLKT 300
++ LPD+ +E+ F S RE R +L ++ SL +F
Sbjct: 2202 KDDL-LPDLNPVEQFFQGN---FPGSVQRE--------RHYNMLQFQVSSSSLARIFQLL 2249
Query: 301 IYRRD 305
+ +D
Sbjct: 2250 LSHKD 2254
Score = 132 bits (330), Expect = 4e-30
Identities = 73/214 (34%), Positives = 125/214 (58%), Gaps = 3/214 (1%)
Query: 6 IENLTKSYGKF--KAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSVRLL 63
++NL K + AVD L++ + I FLG NGAGKTTT+ + G++ P SG+V +
Sbjct: 958 VKNLVKIFEPCGRPAVDRLNITFYENQITAFLGHNGAGKTTTLSILTGLLPPTSGTVLVG 1017
Query: 64 GYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLKLVG 123
G DI ++ LG P++ ++ LT ++ F+A ++E + +E +L+ G
Sbjct: 1018 GRDIETSLDAVRQSLGMCPQHNILFHHLTVAEHMLFYAQLKGKSQEEAQLEMEAMLEDTG 1077
Query: 124 LWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQKKQ 183
L R + + S GM+++L +A A + D +++ILDEPTSG+DP R + D++L+ +
Sbjct: 1078 LHHKRNEEAQDLSGGMQRKLSVAIAFVGDAKVVILDEPTSGVDPYSRRSIWDLLLKY-RS 1136
Query: 184 GKTVFFSSHILSEVEELADKVGIIVKGKLRTVGT 217
G+T+ S+H + E + L D++ II +G+L GT
Sbjct: 1137 GRTIIMSTHHMDEADLLGDRIAIIAQGRLYCSGT 1170
>gi|4557876 ATP-binding cassette, sub-family A member 4; ATP binding cassette
transporter; ATP-binding transporter, retina-specific;
rim protein [Homo sapiens] >gi|1888527|gb|AAC51144.1|
(U88667) ATP-binding cassette transporter [Homo sapiens]
Length = 2273
Score = 145 bits (361), Expect = 8e-34
Identities = 96/305 (31%), Positives = 155/305 (50%), Gaps = 16/305 (5%)
Query: 3 VIEIENLTKSY--GKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSV 60
++ + LTK Y AVD L + V G FG LG NGAGKTTT + G SG
Sbjct: 1937 ILRLHELTKIYLGTSSPAVDRLCVGVRPGECFGLLGVNGAGKTTTFKMLTGDTTVTSGDA 1996
Query: 61 RLLGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLK 120
+ G I + + +G+ P+ I E LT +L +A +P +E EK +K
Sbjct: 1997 TVAGKSILTNISEVHQNMGYCPQFDAIDELLTGREHLYLYARLRGVPAEEIEKVANWSIK 2056
Query: 121 LVGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQ 180
+GL ++S G K++L A ALI P L++LDEPT+G+DPQ R++ ++I+
Sbjct: 2057 SLGLTVYADCLAGTYSGGNKRKLSTAIALIGCPPLVLLDEPTTGMDPQARRMLWNVIVSI 2116
Query: 181 KKQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYEIKVETKQP 240
++G+ V +SH + E E L ++ I+VKG R +GT++ +K ++ +GY + ++ K P
Sbjct: 2117 IRKGRAVVLTSHSMEECEALCTRLAIMVKGAFRCMGTIQHLKSKFG--DGYIVTMKIKSP 2174
Query: 241 FPEIELPDVIRIEKIADNKVLIFAKSDIREILSEELSKRGITVLSLEIEEPSLEDVFLKT 300
++ LPD+ +E+ F S RE R +L ++ SL +F
Sbjct: 2175 KDDL-LPDLNPVEQFFQGN---FPGSVQRE--------RHYNMLQFQVSSSSLARIFQLL 2222
Query: 301 IYRRD 305
+ +D
Sbjct: 2223 LSHKD 2227
Score = 129 bits (322), Expect = 3e-29
Identities = 71/214 (33%), Positives = 123/214 (57%), Gaps = 3/214 (1%)
Query: 6 IENLTKSYGKF--KAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSVRLL 63
++NL K + AVD L++ + I FLG NGAGKTTT+ + G++ P SG+V +
Sbjct: 931 VKNLVKIFEPCGRPAVDRLNITFYENQITAFLGHNGAGKTTTLSILTGLLPPTSGTVLVG 990
Query: 64 GYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLKLVG 123
G DI ++ LG P++ ++ LT ++ F+A ++E + +E +L+ G
Sbjct: 991 GRDIETSLDAVRQSLGMCPQHNILFHHLTVAEHMLFYAQLKGKSQEEAQLEMEAMLEDTG 1050
Query: 124 LWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQKKQ 183
L R + + S GM+++L +A A + D +++ILDEPTSG+DP R + D++L+ +
Sbjct: 1051 LHHKRNEEAQDLSGGMQRKLSVAIAFVGDAKVVILDEPTSGVDPYSRRSIWDLLLKY-RS 1109
Query: 184 GKTVFFSSHILSEVEELADKVGIIVKGKLRTVGT 217
G+T+ +H + E + D++ II +G+L GT
Sbjct: 1110 GRTIIMPTHHMDEADHQGDRIAIIAQGRLYCSGT 1143
>gb|AAC23915.1| (AF000148) ATP-binding cassette transporter [Homo sapiens]
Length = 2273
Score = 144 bits (360), Expect = 1e-33
Identities = 96/305 (31%), Positives = 155/305 (50%), Gaps = 16/305 (5%)
Query: 3 VIEIENLTKSYG--KFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSV 60
++ + LTK Y AVD L + V G FG LG NGAGKTTT + G SG
Sbjct: 1937 ILRLHELTKIYPGTSSPAVDRLCVGVRPGECFGLLGVNGAGKTTTFKMLTGDNTVTSGDA 1996
Query: 61 RLLGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLK 120
+ G I + + +G+ P+ I E LT +L +A +P +E EK +K
Sbjct: 1997 TVAGKSILTNISEVHQNMGYCPQFDAIDELLTGREHLYLYARLRGVPAEEIEKVANWSIK 2056
Query: 121 LVGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQ 180
+GL ++S G K++L A ALI P L++LDEPT+G+DPQ R++ ++I+
Sbjct: 2057 SLGLTVYADCLAGTYSGGNKRKLSTAIALIGCPPLVLLDEPTTGMDPQARRMLWNVIVSI 2116
Query: 181 KKQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYEIKVETKQP 240
++G+ V +SH + E E L ++ I+VKG R +GT++ +K ++ +GY + ++ K P
Sbjct: 2117 IREGRAVVLTSHSMEECEALCTRLAIMVKGAFRCMGTIQHLKSKFG--DGYIVTMKIKSP 2174
Query: 241 FPEIELPDVIRIEKIADNKVLIFAKSDIREILSEELSKRGITVLSLEIEEPSLEDVFLKT 300
++ LPD+ +E+ F S RE R +L ++ SL +F
Sbjct: 2175 KDDL-LPDLNPVEQFFQGN---FPGSVQRE--------RHYNMLQFQVSSSSLARIFQLL 2222
Query: 301 IYRRD 305
+ +D
Sbjct: 2223 LSHKD 2227
Score = 132 bits (330), Expect = 4e-30
Identities = 73/214 (34%), Positives = 125/214 (58%), Gaps = 3/214 (1%)
Query: 6 IENLTKSYGKF--KAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSVRLL 63
++NL K + AVD L++ + I FLG NGAGKTTT+ + G++ P SG+V +
Sbjct: 931 VKNLVKIFEPSGRPAVDRLNITFYENQITAFLGHNGAGKTTTLSILTGLLPPTSGTVLVG 990
Query: 64 GYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLKLVG 123
G DI ++ LG P++ ++ LT ++ F+A ++E + +E +L+ G
Sbjct: 991 GRDIETSLDAVRQSLGMCPQHNILFHHLTVAEHMLFYAQLKGKSQEEAQLEMEAMLEDTG 1050
Query: 124 LWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQKKQ 183
L R + + S GM+++L +A A + D +++ILDEPTSG+DP R + D++L+ +
Sbjct: 1051 LHHKRNEEAQDLSGGMQRKLSVAIAFVGDAKVVILDEPTSGVDPYSRRSIWDLLLKY-RS 1109
Query: 184 GKTVFFSSHILSEVEELADKVGIIVKGKLRTVGT 217
G+T+ S+H + E + L D++ II +G+L GT
Sbjct: 1110 GRTIIMSTHHMDEADLLGDRIAIIAQGRLYCSGT 1143
>pir||T27121 hypothetical protein Y53C10A.9 - Caenorhabditis elegans
>gi|3947655|emb|CAA22142.1| (AL033536) predicted using
Genefinder~contains similarity to Pfam domain: PF00005
(ABC transporter), Score=319.4, E-value=1.4e-92, N=2~cDNA
EST yk93b1.5 comes from this gene~cDNA EST yk208d6.3
comes from this gene~cDNA EST yk208d6.5 comes from this
gene
Length = 1564
Score = 144 bits (359), Expect = 1e-33
Identities = 95/315 (30%), Positives = 172/315 (54%), Gaps = 25/315 (7%)
Query: 3 VIEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSVRL 62
V+ I+ L K +GKF+AV++LS+ V FG LG NGAGKTTT + G+ +P GS +
Sbjct: 1249 VLVIDGLVKDFGKFRAVNDLSISVGHEECFGMLGANGAGKTTTFDIITGLTMPTGGSATI 1308
Query: 63 LGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLKLV 122
G+DI E I +G+ P+ + ++++ + L A P ++ +E +L V
Sbjct: 1309 DGHDI-TETI----HIGYCPQFDAMLQQISCRQTLRIMAKLQGYPNVKEV--VELVLDCV 1361
Query: 123 GLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQKK 182
G+ D Y+ VK+ S G K+++ + AL++ +ILDEPT+G+DP+ R + DII E ++
Sbjct: 1362 GMSDFGYKLVKNCSGGQKRKISVGIALMSRATCIILDEPTAGIDPRARREIWDIIHEMRE 1421
Query: 183 QGK-TVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYEIKVETKQPF 241
Q K ++ +SH + E E L ++GI+ KG++ +GT + +K QY + + + +
Sbjct: 1422 QAKCSIVLTSHSMEECEALCTRIGILRKGEMIALGTSQSLKSQYGNTYMMTLILNSLEDL 1481
Query: 242 PEI------ELPDVIRIEKIADNKVLIFAKSDIREILSEELSKR--GITVLSLE------ 287
+ E+PD + K ++ + ++ + S++ S++ + VL+ +
Sbjct: 1482 ESVCVIVSEEMPDAVL--KTPESSLTTSIVWELPKSKSDKWSEKYNQVEVLAKKANAKDY 1539
Query: 288 -IEEPSLEDVFLKTI 301
+ + SLED F++ I
Sbjct: 1540 MLTQASLEDTFIRLI 1554
Score = 120 bits (298), Expect = 2e-26
Identities = 75/224 (33%), Positives = 118/224 (52%), Gaps = 3/224 (1%)
Query: 4 IEIENLTKSYGKF-KAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSVRL 62
IE+ L K Y KAV+ LSL +G + LG NG GK+TT + G+ G V +
Sbjct: 451 IELSGLVKVYQNGEKAVNGLSLRAIRGQVSILLGHNGCGKSTTFGMITGMHQATEGKVMI 510
Query: 63 LGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKR-IEELLKL 121
G D +A+E +G+ P+ IY+ELT W +L + K E LLK
Sbjct: 511 GGIDANANRAEARELIGYCPQYNPIYDELTVWEHLRLVNALKGRSGGSDFKMDAESLLKQ 570
Query: 122 VGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQK 181
+ L D R K+ S GMK++L + A+I +++LDEPT+G+DP AR+ +L
Sbjct: 571 IELTDKRNTLAKNLSGGMKRKLCVCMAMIGGSRVILLDEPTAGMDP-SARIDVQNMLALV 629
Query: 182 KQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQY 225
K +T+ ++H + E E+L D + ++ GK+ G+ +K++Y
Sbjct: 630 KADRTILLTTHYMDEAEKLGDWIFVMSHGKMAASGSKHYLKQKY 673
>gb|AAF04137.1|AF191033_5 (AF191033) hypothetical ABC transporter [Mycobacterium smegmatis]
Length = 267
Score = 144 bits (359), Expect = 1e-33
Identities = 90/273 (32%), Positives = 153/273 (55%), Gaps = 10/273 (3%)
Query: 31 IFGFLGPNGAGKTTTILSMLGIIIPDSGSVRLLGYDIFKEPIKAKERLGFLPENATIYEE 90
IFGF+G NGAGK+TT+ +LG++ PD+G V L+G D+ + + R+G++PE +Y +
Sbjct: 1 IFGFVGSNGAGKSTTMRIILGVLAPDAGRV-LIGEDVID--LDLRRRIGYMPEERGLYPK 57
Query: 91 LTAWRNLDFFASFYNIPKQEKEKRIEELLKLVGLWDVRYRKVKSFSKGMKQRLLLAQALI 150
+ L F A + + E + +G+ V S G +QR+ LA AL+
Sbjct: 58 MKVGEQLTFLARLHGMETAEAAESARRWADRLGVGSRFGDDVADLSLGNQQRVQLAAALV 117
Query: 151 NDPELLILDEPTSGLDPQGARLVKDIILEQKKQGKTVFFSSHILSEVEELADKVGIIVKG 210
+DP++L+LDEP SGLDP ++ D++ E+ +G V FSSH L V+ + D+VGII +G
Sbjct: 118 HDPDVLVLDEPFSGLDPVAVDVMSDVLKEKAAEGIPVIFSSHQLDLVQRICDRVGIIARG 177
Query: 211 KLRTVGTLEEIK-KQYMELEGYEIKVETKQPFPEIELPDVIRIEKIADNKVLIFAK-SDI 268
++R +GT+E+++ + + LE + +T LP V +E ++LI + +D
Sbjct: 178 EMRALGTVEDLRTRSGLTLEVSGPRTDTAW---ADHLPGVRDVEYGETTRLLIDPQLADD 234
Query: 269 REILSEELSKRGITVLSLEIEEPSLEDVFLKTI 301
++IL+ L + V PSL ++F + +
Sbjct: 235 QQILAAALEQG--PVHRFATSAPSLTELFREVV 265
>gb|AAC80570.1| (AF105431) NodI [Bradyrhizobium sp. SNU001]
Length = 305
Score = 143 bits (358), Expect = 2e-33
Identities = 96/298 (32%), Positives = 152/298 (50%), Gaps = 10/298 (3%)
Query: 4 IEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSVRLL 63
I++ + KS+G V++LS V +G FG LGPNGAGK+T +LG+I PD G + +L
Sbjct: 8 IDLVGVRKSFGDKVIVNDLSFSVARGECFGLLGPNGAGKSTIARMLLGMIWPDRGKITVL 67
Query: 64 GYDIFKEPIKAKER--LGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLKL 121
+ P +A+ R +G +P+ + E T NL F ++ + + E + LL+
Sbjct: 68 DEPV---PSRARARRGVGVVPQFDNLEPEFTVRENLLVFGRYFGMSARTIEAVVPSLLEF 124
Query: 122 VGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQK 181
L +V GMK+RL LA+ALINDP LL++DEPT+GLDP L+ + +
Sbjct: 125 ARLESKADVRVSLLGGGMKRRLTLARALINDPHLLVMDEPTTGLDPHARHLIWERLRALL 184
Query: 182 KQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYEIKVETKQPF 241
+GKT+ ++H + E E L D + ++ G G + + +++ EI
Sbjct: 185 ARGKTILLTTHFMEEAERLCDPLCVLESGCKIAEGEPDALIDEHIGCNVIEIYGGDLDQL 244
Query: 242 PEIELPDVIRIEKIADNKVLIFAKSDIREILSEELSKRGITVLSLEIEEPSLEDVFLK 299
E+ P IE + +F + + +S L RG T L + P+LEDVFL+
Sbjct: 245 RELIRPYARHIEVSGET---LFCYARCPDEISVHL--RGRTGLRVLQRPPNLEDVFLR 297
>pir||T07716 probable ABC-type transport protein T23J7.100 - Arabidopsis
thaliana >gi|4741194|emb|CAB41860.1| (AL049746) ABC
transporter-like protein [Arabidopsis thaliana]
Length = 722
Score = 143 bits (357), Expect = 2e-33
Identities = 99/309 (32%), Positives = 163/309 (52%), Gaps = 31/309 (10%)
Query: 18 AVDNLSLEVEKGIIFGFLGPNGAGKTTTI--------------LSMLGIIIPDSGSVRLL 63
AV LSL V G FG LGPNGAGKT+ I M G++ P SGS +
Sbjct: 412 AVCGLSLAVPSGECFGMLGPNGAGKTSFINMVSTQRDIYTNLLCLMTGLVKPSSGSAFVQ 471
Query: 64 GYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLKLVG 123
G DI K+ K +G P++ ++E LT +L F+ N+ + + +EE LK V
Sbjct: 472 GLDICKDMDKVYISMGVCPQHDLLWETLTGKEHLLFYGRLKNLKGHDLNQAVEESLKSVN 531
Query: 124 LWDVRYRKVKS--FSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQK 181
L+ + + +S GMK+RL +A +LI P+++ +DEP++GLDP +R+ ++++
Sbjct: 532 LFHGGVADIPAGKYSGGMKRRLSVAISLIGSPKVVYMDEPSTGLDP-ASRINLWTVIKRA 590
Query: 182 KQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYEIKVETKQPF 241
K+ + ++H + E E L D++GI V G+L+ +G +E+K +Y G + T P
Sbjct: 591 KKHAAIILTTHSMEEAEFLCDRLGIFVDGRLQCIGNPKELKGRY---GGSYVLTITTSPE 647
Query: 242 PEIELPDVI--------RIEKIADNKVLIFAKSDIR--EIL-SEELSKRGITVLSLEIEE 290
E ++ ++ +I IA + F K ++R E+ + E +KR TV + +
Sbjct: 648 HEKDVETLVQEVSSNARKIYHIAGTQKFEFPKEEVRISEVFQAVENAKRNFTVFAWGFAD 707
Query: 291 PSLEDVFLK 299
+LEDVF+K
Sbjct: 708 TTLEDVFIK 716
>emb|CAB99138.1| (AL390188) putative ABC transport system ATP-binding protein
[Streptomyces coelicolor A3(2)]
Length = 306
Score = 143 bits (357), Expect = 2e-33
Identities = 78/214 (36%), Positives = 133/214 (61%), Gaps = 9/214 (4%)
Query: 1 MKVIEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSV 60
M I++ +LTK YG +AVD+LS V G + GFLGPNGAGK+TT+ +LG+ P +G+
Sbjct: 1 MTSIDVRDLTKDYGTRRAVDDLSFTVRPGRVTGFLGPNGAGKSTTMRLVLGLDRPTAGTA 60
Query: 61 RLLG--YDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEEL 118
+ G Y EP++ +G L + + TA +L A+ +P +R++E+
Sbjct: 61 TVGGRPYTALDEPLRL---VGALLDADCAHGSRTARDHLRVLAASNRLPA----RRVDEV 113
Query: 119 LKLVGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIIL 178
++ G+ V R+V+++S GM+QRL +A AL+ DPE+++LDEP++GLDP+G ++ ++
Sbjct: 114 MEQTGIAAVARRRVRTYSLGMRQRLGIAAALLGDPEVVMLDEPSNGLDPEGIVWIRGLLR 173
Query: 179 EQKKQGKTVFFSSHILSEVEELADKVGIIVKGKL 212
+G+TV SSH+++E D + ++ +G+L
Sbjct: 174 GLAAEGRTVLVSSHLMNETASFVDHLVVLGRGRL 207
>emb|CAC11378.1| (AL445063) gliding motility protein related [Thermoplasma
acidophilum]
Length = 239
Score = 143 bits (357), Expect = 2e-33
Identities = 83/228 (36%), Positives = 137/228 (59%), Gaps = 9/228 (3%)
Query: 1 MKVIEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSV 60
M IE ++TKS+G KA+D LS +VE +GPNGAGK+TT+ + G+I PDSGSV
Sbjct: 4 MNCIEFNDVTKSFGTKKALDGLSFDVECQESVALIGPNGAGKSTTLKILAGLIKPDSGSV 63
Query: 61 RLLGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLK 120
++ G+D + I+AK +G+LPE+A+ Y L+ NL++ + ++ E+++E LL
Sbjct: 64 KVGGFD--PDSIEAKRLMGYLPEDASPYLTLSVKENLEYIGALRK--TEDLEQKVEFLLN 119
Query: 121 LVGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLD-PQGARLVKDIILE 179
L+ L + R +V + S+G +Q+L +A A+I+DP++++LDEP + LD P +++K
Sbjct: 120 LMELNEYRNSRVSTLSRGNRQKLSIALAIIHDPKIMLLDEPLNYLDIPTQEKIIKYF--- 176
Query: 180 QKKQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYME 227
T S+HI+S E + II G+ G ++E+K+ E
Sbjct: 177 -NSMNATFLVSTHIMSIAERFTRRAIIINSGRQIWTGQIDELKEMSRE 223
>pir||E70871 hypothetical protein Rv1458c - Mycobacterium tuberculosis (strain
H37RV) >gi|2791392|emb|CAA15988.1| (AL021184)
hypothetical protein Rv1458c [Mycobacterium
tuberculosis]
Length = 313
Score = 143 bits (356), Expect = 3e-33
Identities = 99/311 (31%), Positives = 154/311 (48%), Gaps = 20/311 (6%)
Query: 3 VIEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSVRL 62
V+ + + K YG AV NL L+V + LGPNGAGKTTT+ G + PD+GS+ +
Sbjct: 11 VLRLRGVCKRYGSITAVSNLDLDVHDAEVMALLGPNGAGKTTTVEMCEGFVRPDAGSIEV 70
Query: 63 LGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLKLV 122
LG D + + + R+G + + Y A LD AS+ P LL +
Sbjct: 71 LGLDPITDNARLRARIGVMLQGGGGYPAARAGEMLDLVASYAANPLDP-----HWLLDTL 125
Query: 123 GLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQKK 182
GL + + S G +QRL LA AL+ P+L+ LDEPT+G+D LV ++I ++
Sbjct: 126 GLTEAARTTYRRLSGGQQQRLALACALVGRPQLVFLDEPTAGMDAHARVLVWELIDALRR 185
Query: 183 QGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYEIKVETKQPFP 242
G TV ++H L E EELAD++ II G GT E+ + G + ++ P P
Sbjct: 186 DGVTVVLTTHHLKEAEELADRLVIIDHGVTVAAGTPAELMR-----SGAKDQLRFTAP-P 239
Query: 243 EIE-------LPDVIRIEKIADNKVLIFAKSDIREILSEELSKRGITVLS--LEIEEPSL 293
++ LP+ + ++ + L+ D + + + I VL+ + +E+ SL
Sbjct: 240 RLDLSLLASALPEGYQATELTPGEYLVEGPVDPQVLATVTAWCAQIDVLATDMRVEQRSL 299
Query: 294 EDVFLKTIYRR 304
EDVFL R+
Sbjct: 300 EDVFLDLTGRK 310
>sp|P26946|YATR_BACFI HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PROTEIN
>gi|98114|pir||S15486 probable ABC-type transport
protein - Bacillus firmus >gi|39478|emb|CAA42056.1|
(X59424) ATP binding protein of transport ATPases
[Bacillus firmus]
Length = 267
Score = 142 bits (355), Expect = 4e-33
Identities = 88/268 (32%), Positives = 145/268 (53%), Gaps = 8/268 (2%)
Query: 35 LGPNGAGKTTTILSMLGIIIPDSGSVRLLGYDIFKEPIKAKERLGFLPENATIYEELTAW 94
LG NGAGKTTT MLG++ P G + G I +G+LPE +Y +L
Sbjct: 2 LGANGAGKTTTFRMMLGLLEPTEGEMTWKGEKI---DYPRTNVIGYLPEERGLYPKLKVR 58
Query: 95 RNLDFFASFYNIPKQEKEKRIEELLKLVGLWDVRYRKVKSFSKGMKQRLLLAQALINDPE 154
L + + K++ + L+ + D ++++ SKG +Q++ ++I+ PE
Sbjct: 59 DQLIYLGRLKGMHKKDIIPEMRMWLERFKVTDYETKRIEELSKGNQQKIQFIASVIHRPE 118
Query: 155 LLILDEPTSGLDPQGARLVKDIILEQKKQGKTVFFSSHILSEVEELADKVGIIVKGKLRT 214
LLILDEP SGLDP A L+K+ +++ KK+G T+ FSSH + VEEL + I+ G
Sbjct: 119 LLILDEPFSGLDPVNAELLKEAVIDLKKKGTTIVFSSHRMDHVEELCQHLCILRHGTPVV 178
Query: 215 VGTLEEIKKQYMELEGYEIKVETKQPFPEIE-LPDVIRIEKIADNKVLIFAKSDIREILS 273
G L EIK+ + I +E ++ F ++ LP V + ++ L ++ +++
Sbjct: 179 KGELREIKRSF---RNKFIVIEGERSFETLKNLPGVKKFQQKQGGVRLQVEDEEVAKVIF 235
Query: 274 EELSKRGITVLSLEIEEPSLEDVFLKTI 301
E++K G V LE+EEPSL+D+F++ +
Sbjct: 236 AEVAKSGY-VRRLEVEEPSLQDIFIEKV 262
>sp|P50332|NODI_RHIGA NODULATION ATP-BINDING PROTEIN I >gi|1001916|emb|CAA60881.1|
(X87578) nodI [Rhizobium galegae]
Length = 347
Score = 142 bits (355), Expect = 4e-33
Identities = 96/298 (32%), Positives = 150/298 (50%), Gaps = 9/298 (3%)
Query: 4 IEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSVRLL 63
I+++ +T Y VD+LS V G FG LGPNGAGK+T +LG+ P +G + +L
Sbjct: 49 IDLQAVTMIYRDKTVVDSLSFGVRAGECFGLLGPNGAGKSTITRMLLGMATPSAGKISVL 108
Query: 64 GYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLKLVG 123
G + + A+ +G + + + E T NL F ++ + + EK I LL+
Sbjct: 109 GLPVPGKARLARASIGVVSQFDNLDMEFTVRENLLVFGRYFQMSTRAIEKLIPSLLEFAQ 168
Query: 124 LWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQKKQ 183
L +V S GMK+RL LA+AL+NDP+LLILDEPT+GLDP + + + +
Sbjct: 169 LEAKADVRVSDLSGGMKRRLTLARALVNDPQLLILDEPTTGLDPPARHQIWERLRSLLIR 228
Query: 184 GKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYEIKVETKQPFPE 243
GKT+ ++H++ E E + D++ ++ G++ G + + + E+
Sbjct: 229 GKTILLTTHMMDEAERMCDRLCVLEGGRMIAEGPPLSLIEDIIGCPVIEVYGGNPDELSL 288
Query: 244 IELPDVIRIEKIADNKVLIFAKSD-IREILSEELSKRGITVLSLEIEEP-SLEDVFLK 299
I P V RIE + SD +R L E S R +E P +LEDVFL+
Sbjct: 289 IVRPHVDRIETSGETLFCYTVNSDQVRAKLREFPSLR-------LLERPANLEDVFLR 339
>gb|AAC02761.2| (AC002339) putative ABC transporter [Arabidopsis thaliana]
Length = 1816
Score = 142 bits (355), Expect = 4e-33
Identities = 80/228 (35%), Positives = 131/228 (57%), Gaps = 5/228 (2%)
Query: 2 KVIEIENLTKSY----GKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDS 57
+ I++ NL K Y G AV++L L + + I LG NGAGK+TTI ++G++ P S
Sbjct: 447 RCIQVRNLHKVYASRRGNCCAVNSLQLTLYENQILSLLGHNGAGKSTTISMLVGLLPPTS 506
Query: 58 GSVRLLGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEE 117
G +LG I + ++ LG P++ ++ ELT +L+ FA + + + + +
Sbjct: 507 GDALILGNSIITNMDEIRKELGVCPQHDILFPELTVREHLEMFAVLKGVEEGSLKSTVVD 566
Query: 118 LLKLVGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDII 177
+ + VGL D V++ S GMK++L L ALI + +++ILDEPTSG+DP RL +I
Sbjct: 567 MAEEVGLSDKINTLVRALSGGMKRKLSLGIALIGNSKVIILDEPTSGMDPYSMRLTWQLI 626
Query: 178 LEQKKQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQY 225
+ KK G+ + ++H + E EEL D++GI+ G L+ G+ +K Y
Sbjct: 627 KKIKK-GRIILLTTHSMDEAEELGDRIGIMANGSLKCCGSSIFLKHHY 673
Score = 137 bits (341), Expect = 2e-31
Identities = 80/238 (33%), Positives = 134/238 (55%), Gaps = 11/238 (4%)
Query: 3 VIEIENLTKSY------GKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPD 56
++ ++NL K Y G AV +L+ V+ G FGFLG NGAGKTTT+ + G P
Sbjct: 1380 MLYLQNLRKVYPGDKHHGPKVAVQSLTFSVQAGECFGFLGTNGAGKTTTLSMLSGEETPT 1439
Query: 57 SGSVRLLGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIE 116
SG+ + G DI P ++ +G+ P+ ++E LT +L+ +A + + +
Sbjct: 1440 SGTAFIFGKDIVASPKAIRQHIGYCPQFDALFEYLTVKEHLELYARIKGVVDHRIDNVVT 1499
Query: 117 ELLKLVGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDI 176
E L L ++ + S G K++L +A A+I DP ++ILDEP++G+DP R + D+
Sbjct: 1500 EKLVEFDLLKHSHKPSFTLSGGNKRKLSVAIAMIGDPPIVILDEPSTGMDPVAKRFMWDV 1559
Query: 177 ILE-QKKQGKT-VFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQY---MELE 229
I + GKT V ++H ++E + L ++GI+V G+LR +G+ + +K +Y +ELE
Sbjct: 1560 ISRLSTRSGKTAVILTTHSMNEAQALCTRIGIMVGGRLRCIGSPQHLKTRYGNHLELE 1617
>pir||T07714 probable ABC-type transport protein T23J7.80 - Arabidopsis thaliana
>gi|4741192|emb|CAB41858.1| (AL049746) ABC
transporter-like protein [Arabidopsis thaliana]
Length = 895
Score = 141 bits (352), Expect = 1e-32
Identities = 97/294 (32%), Positives = 156/294 (52%), Gaps = 15/294 (5%)
Query: 18 AVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSVRLLGYDIFKEPIKAKER 77
AV LS+ V G FG LGPNGAGKT+ I M G++ P SG+ + DI ++ K
Sbjct: 593 AVGGLSIAVPPGECFGMLGPNGAGKTSFINMMTGLVKPTSGTALVESLDICQDMDKVYTS 652
Query: 78 LGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLKLVGL--WDVRYRKVKSF 135
+G P++ ++E LT +L F+ N+ + + IEE LK V L V + +
Sbjct: 653 MGVCPQHDLLWETLTGREHLLFYGRLKNLKGSDLNQAIEESLKSVNLSREGVADKPAGKY 712
Query: 136 SKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQKKQGKTVFFSSHILS 195
S GMK+RL +A +LI P+++ +DEP++GLDP R + I KK + ++H +
Sbjct: 713 SGGMKRRLSVAISLIGSPKVVYMDEPSTGLDPASRRSLWTAIKGAKKH-TAIILTTHSME 771
Query: 196 EVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYEIKVETKQPF-PEIEL------PD 248
E E L D++GI V G+L+ VG +E+K +Y Y + + T ++E+ P+
Sbjct: 772 EAEFLCDRLGIFVDGRLQCVGNPKELKARYG--GSYVLTMTTSSEHEKDVEMLIQDVSPN 829
Query: 249 VIRIEKIADNKVLIFAKSDIR--EIL-SEELSKRGITVLSLEIEEPSLEDVFLK 299
+I IA + K ++R E+ + E +K V + + + +LEDVF+K
Sbjct: 830 AKKIYHIAGTQKFEIPKDEVRIAELFQAVEKAKGNFRVFAWGLADTTLEDVFIK 883
>dbj|BAB10074.1| (AB010069) contains similarity to ABC transporter~gene_id:MAC9.5
[Arabidopsis thaliana]
Length = 907
Score = 141 bits (352), Expect = 1e-32
Identities = 96/295 (32%), Positives = 154/295 (51%), Gaps = 17/295 (5%)
Query: 18 AVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSVRLLGYDIFKEPIKAKER 77
AV L L+V G FG LGPNGAGKT+ I M G++ P SG+ + G DI K+ K
Sbjct: 605 AVRGLYLDVPSGECFGMLGPNGAGKTSFINMMTGLLKPTSGTALVQGLDICKDMNKVYTS 664
Query: 78 LGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLKLVGLWD--VRYRKVKSF 135
+G P++ ++ LT +L F+ NI + +EE LK V L+D V + +
Sbjct: 665 MGVCPQHDLLWGTLTGREHLLFYGRLKNIKGSALMQAVEESLKSVSLFDGGVADKPAGKY 724
Query: 136 SKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDI--ILEQKKQGKTVFFSSHI 193
S GMK+RL +A +LI +P+++ +DEP++GLDP KD+ ++++ KQ + ++H
Sbjct: 725 SGGMKRRLSVAISLIGNPKVVYMDEPSTGLDPASR---KDLWTVIQRAKQNTAIILTTHS 781
Query: 194 LSEVEELADKVGIIVKGKLRTVGTLEEIKKQY------MELEGYEIKVETKQPFPEIELP 247
+ E E L D++GI V G L+ VG +E+K +Y E + + ++ I P
Sbjct: 782 MEEAEFLCDRLGIFVDGGLQCVGNPKELKGRYGGSYVFTMTTSVEHEEKVERMVKHIS-P 840
Query: 248 DVIRIEKIADNKVLIFAKSDIR---EILSEELSKRGITVLSLEIEEPSLEDVFLK 299
+ R+ +A + K ++ E K TV + + + +LEDVF K
Sbjct: 841 NSKRVYHLAGTQKFEIPKQEVMIADVFFMVEKVKSKFTVFAWGLADTTLEDVFFK 895
>gi|6671495 ATP-binding cassette, sub-family A, member 4; ATP-binding cassette
10; Rim protein [Mus musculus] >gi|2547314|gb|AAC23916.1|
(AF000149) ATP-binding cassette transporter [Mus
musculus]
Length = 2310
Score = 139 bits (348), Expect = 3e-32
Identities = 96/305 (31%), Positives = 154/305 (50%), Gaps = 16/305 (5%)
Query: 3 VIEIENLTKSYG--KFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSV 60
++++ LTK Y AVD L + V G FG LG NGAGKTTT + G SG
Sbjct: 1936 ILKLNELTKVYSGSSSPAVDRLCVGVRPGECFGLLGVNGAGKTTTFKMLTGDTTVTSGDA 1995
Query: 61 RLLGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLK 120
+ G I + +G+ P+ I + LT +L +A +P +E EK ++
Sbjct: 1996 TVAGKSILTSISDVHQNMGYCPQFDAIDDLLTGREHLYLYARLRGVPSKEIEKVANWGIQ 2055
Query: 121 LVGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQ 180
+GL R ++S G K++L A AL P LL+LDEPT+G+DPQ R++ + I+
Sbjct: 2056 SLGLSLYADRLAGTYSGGNKRKLSTAIALTGCPPLLLLDEPTTGMDPQARRMLWNTIVSI 2115
Query: 181 KKQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYEIKVETKQP 240
++G+ V +SH + E E L ++ I+VKG + +GT++ +K Y +GY + ++ K P
Sbjct: 2116 IREGRAVVLTSHSMEECEALCTRLAIMVKGTFQCLGTIQHLK--YKFGDGYIVTMKIKSP 2173
Query: 241 FPEIELPDVIRIEKIADNKVLIFAKSDIREILSEELSKRGITVLSLEIEEPSLEDVFLKT 300
++ LPD+ +E+ F S RE R ++L ++ SL +F
Sbjct: 2174 KDDL-LPDLNPVEQFFQGN---FPGSVQRE--------RHHSMLQFQVPSSSLARIFQLL 2221
Query: 301 IYRRD 305
I +D
Sbjct: 2222 ISHKD 2226
Score = 130 bits (323), Expect = 2e-29
Identities = 72/214 (33%), Positives = 124/214 (57%), Gaps = 3/214 (1%)
Query: 6 IENLTKSYGKF--KAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSVRLL 63
++NL K + AVD L++ + I FLG NGAGKTTT+ + G++ P SG+V +
Sbjct: 931 VKNLVKVFEPSGRPAVDRLNITFYENQITAFLGHNGAGKTTTLSILTGLLPPTSGTVLIG 990
Query: 64 GYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLKLVG 123
G DI ++ LG P++ ++ LT ++ F+A +E + +E +L+ G
Sbjct: 991 GKDIETNLDVVRQSLGMCPQHNILFHHLTVAEHILFYAQLKGRSWEEAQLEMEAMLEDTG 1050
Query: 124 LWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQKKQ 183
L R + + S GM+++L +A A + D ++++LDEPTSG+DP R + D++L+ +
Sbjct: 1051 LHHKRNEEAQDLSGGMQRKLSVAIAFVGDSKVVVLDEPTSGVDPYSRRSIWDLLLKY-RS 1109
Query: 184 GKTVFFSSHILSEVEELADKVGIIVKGKLRTVGT 217
G+T+ S+H + E + L D++ II +G+L GT
Sbjct: 1110 GRTIIMSTHHMDEADLLGDRIAIISQGRLYCSGT 1143
>pir||T33783 hypothetical protein Y39D8C.1 - Caenorhabditis elegans
>gi|3806158|gb|AAC69223.1| (AF101313) similar to the
ATP-binding transport protein family (ABC transporter)
(Pfam: ABC_tran.hmm, score: 162.68 and 139.46)
[Caenorhabditis elegans]
Length = 1802
Score = 139 bits (348), Expect = 3e-32
Identities = 76/231 (32%), Positives = 126/231 (53%), Gaps = 2/231 (0%)
Query: 8 NLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSVRLLGYDI 67
NL K YG F AV ++ V FG LG NGAGKT+T + G SG + G+ +
Sbjct: 1454 NLVKWYGNFNAVKGVNFHVNSKDCFGLLGVNGAGKTSTFQMLTGENSISSGDAYVNGWSV 1513
Query: 68 FKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLKLVGLWDV 127
+A G+ P+ I +E++ L FA IP+++ K++ ++ +G+
Sbjct: 1514 KNNWREAGANTGYCPQYDAIIKEMSGEETLYMFARIRGIPEKDIPKKVNAVIHAIGIGMY 1573
Query: 128 RYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQKKQGKTV 187
R++K++S G K+RL L A++ P++L+LDEPTSG+DP+ R++ +I+ + G +
Sbjct: 1574 ASRQIKTYSGGNKRRLSLGIAIVGLPDVLLLDEPTSGVDPKARRIIWNILNRLRDLGTAL 1633
Query: 188 FFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYEIKVETK 238
+SH + E E L ++ I+V GK R G+ + IK +Y GY + + K
Sbjct: 1634 VLTSHSMDECEALCTELAIMVYGKFRCYGSCQHIKSRYG--SGYTLLIRLK 1682
Score = 127 bits (317), Expect = 1e-28
Identities = 99/333 (29%), Positives = 164/333 (48%), Gaps = 37/333 (11%)
Query: 4 IEIENLTKSYG----------KF------KAVDNLSLEVEKGIIFGFLGPNGAGKTTTIL 47
I + NLTK+YG KF +AV NL+L++ G LG NGAGK+TT
Sbjct: 584 INVVNLTKTYGTSFFKKLFDCKFGKSGEKRAVSNLNLKMYPGQCTVLLGHNGAGKSTTFS 643
Query: 48 SMLGIIIPDSGSVRLLGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIP 107
+ G+ P SGS + +DI K + +G P+ T++ +T +L+FFA
Sbjct: 644 MLTGVASPSSGSAYVNDFDIRTSLPKIRREMGLCPQYNTLFGFMTVMEHLEFFAKLKERT 703
Query: 108 KQEKEKRIEELLKLVGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDP 167
+E R E+L + + + S G K++L LA ALI E+++LDEPTSG+DP
Sbjct: 704 WDPEEAR--EILARLRIDFKADFMAGALSGGQKRKLSLAIALIGGSEVVMLDEPTSGMDP 761
Query: 168 QGARLVKDIILEQKKQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYME 227
GAR +++++K+ +T+ ++H + E + L D++ I+ G+L G+ +K+QY +
Sbjct: 762 -GARHETWTLIQREKERRTILLTTHFMEEADLLGDRIAIMAHGQLECCGSPMFLKQQYGD 820
Query: 228 LEGYEIKVETKQPFPEIELPDVIRIEKIADNKVLIFAKSDIREILS-------------- 273
I +T + D+IR E I + V + + +LS
Sbjct: 821 GYHLTIVYDTTSTPDVSKTTDIIR-EYIPEAHVFSYIGQEATYLLSATHRPIFPKLFKEL 879
Query: 274 -EELSKRGITVLSLEIEEPSLEDVFLKTIYRRD 305
+ ++ GIT + I ++E+VFLK + D
Sbjct: 880 EDHQTQCGITSFGVSI--TTMEEVFLKVGHTAD 910
>pir||T36000 probable ABC-type transport system ATP-binding chain - Streptomyces
coelicolor >gi|5459395|emb|CAB50753.1| (AL096839)
putative ABC transporter, ATP-binding subunit
[Streptomyces coelicolor A3(2)]
Length = 307
Score = 139 bits (348), Expect = 3e-32
Identities = 96/308 (31%), Positives = 158/308 (51%), Gaps = 25/308 (8%)
Query: 3 VIEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSVRL 62
V++++ L K YG AV+ L L G+ LGPNGAGKTTT+ + G PDSG+VR+
Sbjct: 6 VVQVQALVKRYGTKTAVNGLDLVARTGVT-AVLGPNGAGKTTTVETCEGYRRPDSGTVRV 64
Query: 63 LGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLKLV 122
LG D ++ + + R+G + ++ +Y A L A + P ++ L++ +
Sbjct: 65 LGLDPVRQGAELRPRIGVMLQSGGVYSGARADEMLRHVAKLHAHPLD-----VDALIERL 119
Query: 123 GLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQKK 182
GL + S G +QRL LA A++ PEL+ LDEPT+GLDPQ R D++ + +
Sbjct: 120 GLDSCGRTTYRRLSGGQQQRLALAMAVVGRPELVFLDEPTAGLDPQARRATWDLVRDLRG 179
Query: 183 QGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKK-------QYMELEGYEIKV 235
G +V ++H + E E+LAD V II G++ G+ EE+ + ++ G ++
Sbjct: 180 DGVSVILTTHHMDEAEQLADDVAIIDTGRVVAQGSPEELCRGGAENTLRFTGRPGLDVAS 239
Query: 236 ETKQPFPE---IEL-PDVIRIEKIADNKVLIFAKSDIREILSEELSKRGITVLSLEIEEP 291
K P+ EL P R+ D ++L ++ ++ G+ + +E
Sbjct: 240 LLKALPPDSAAAELTPGSYRVNGEVDPQLL--------ATVTSWCAQHGVMPDRISVERH 291
Query: 292 SLEDVFLK 299
+LEDVFL+
Sbjct: 292 TLEDVFLE 299
>emb|CAB88835.1| (AL353832) putative ABC-transport protein, ATP-binding component.
[Streptomyces coelicolor A3(2)]
Length = 354
Score = 139 bits (347), Expect = 4e-32
Identities = 92/299 (30%), Positives = 158/299 (52%), Gaps = 6/299 (2%)
Query: 9 LTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSVRLLGYDIF 68
L + + +AVD LS V +G + G++GPNGAGK+TTI + GI+ P G +R+ G D
Sbjct: 56 LKRERRQVRAVDGLSFTVSRGEMVGYIGPNGAGKSTTIKMLTGILTPSGGRLRVAGIDPS 115
Query: 69 KEPIKAKERLGFL-PENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLKLVGLWDV 127
+E I+ R+G + + T++ +L + Y IP + ++ ++L+ L ++
Sbjct: 116 RERIRLAHRIGVVFGQRTTLWWDLPLIDSYRLMHRMYRIPDARYRENLDRCVELLQLQEL 175
Query: 128 RYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILE-QKKQGKT 186
V+ S G + R +A AL++DPE+L LDEPT GLD V+ +L+ ++G T
Sbjct: 176 LDVPVRQLSLGQRMRGDIAAALLHDPEVLYLDEPTIGLDVVSKAKVRGFLLDLNAERGTT 235
Query: 187 VFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYEIKVETKQPFPEIEL 246
V ++H L ++E+L +V +I G+L G LE + + E E + V+ ++ P IE
Sbjct: 236 VLLTTHDLQDIEQLCSRVMVIDHGRLMYDGRLEGL-HEAGESE-RTLVVDLERELPPIEA 293
Query: 247 PDVIRIEKI-ADNKVLIFAKSDIREILSEELSKRGITVLSLEIEEPSLEDVFLKTIYRR 304
P+ R+ ++ + L F S+ L ++ R ++ L + EP +E V K R
Sbjct: 294 PEPARVVRVEGPRQWLAFPASESAAGLVAGIAAR-YPLVDLSVREPDIESVIAKMYAER 351
>pir||T36064 ABC-type transport system ATP-binding protein - Streptomyces
coelicolor >gi|3928734|emb|CAA22230.1| (AL034355) ABC
transporter ATP-binding protein [Streptomyces coelicolor
A3(2)]
Length = 303
Score = 138 bits (343), Expect = 1e-31
Identities = 77/223 (34%), Positives = 132/223 (58%), Gaps = 6/223 (2%)
Query: 1 MKVIEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSV 60
M + I+++++ +G AV+++++ + G+ G LGPNGAGK+T I M G + P +GSV
Sbjct: 1 MTTLNIDHVSRWFGNVVAVNDITMTIGPGVT-GLLGPNGAGKSTLINMMGGFLAPSTGSV 59
Query: 61 RLLGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLK 120
L G +++ K +G +PE +Y+ LT + A + + + +E L
Sbjct: 60 TLDGQPVWRNEDIYKH-IGIVPEREAMYDFLTGREFVLANAELHGLGA----RAADEALA 114
Query: 121 LVGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQ 180
V + + RK+ ++SKGM+QR+ +A AL++ P LL+LDEP +G+DP+ + D++
Sbjct: 115 TVEMAYAQDRKIATYSKGMRQRVKMASALVHQPSLLLLDEPFNGMDPRQRMQLMDLLRRM 174
Query: 181 KKQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKK 223
+G+TV FSSHIL EVE+LA + +IV G+ G +I++
Sbjct: 175 GDEGRTVLFSSHILEEVEQLAWHIEVIVAGRHAASGDFRKIRR 217
>gb|AAF49305.1| (AE003522) CG5944 gene product [Drosophila melanogaster]
Length = 1463
Score = 138 bits (343), Expect = 1e-31
Identities = 75/221 (33%), Positives = 132/221 (58%), Gaps = 1/221 (0%)
Query: 4 IEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSVRLL 63
++I L+K++GK + V N+S ++ +G I +G NGAGKTT I + G I P SG+ +
Sbjct: 339 VQIRGLSKTFGKMEVVKNVSFDMFEGQITVLMGHNGAGKTTLISMLAGFISPTSGTALIN 398
Query: 64 GYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLKLVG 123
G+DI +E +A+ +G P+ +++ L++ ++ F+ + E + ++ LK +
Sbjct: 399 GFDIRQERRQAQRCIGLCPQQNVLFKHLSSVSHIQLFSRLRGLRGAEVKSEVQNYLKKLN 458
Query: 124 LWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQKKQ 183
L + + ++ S G ++RL +A +L ++LI DEP++GLDP R + +ILE K+
Sbjct: 459 LQEKKRLAARNLSGGTQRRLSVACSLCGGVKVLICDEPSTGLDPSARRELWRLILE-AKE 517
Query: 184 GKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQ 224
G T+ ++H L + E L D+V II G+LR +G+L +KKQ
Sbjct: 518 GCTILLTTHQLDDGEVLGDRVVIISDGQLRCIGSLPFLKKQ 558
Score = 128 bits (318), Expect = 9e-29
Identities = 81/272 (29%), Positives = 143/272 (51%), Gaps = 12/272 (4%)
Query: 2 KVIEIENLTKSYGKFK-AVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSV 60
+ + + ++K YG + AV+N+S ++ G LGPNGAGKTTT ++G D G++
Sbjct: 1048 RALVVNGVSKKYGCDQLAVNNISFALKPSHCVGLLGPNGAGKTTTFKMIVGEHSIDKGNI 1107
Query: 61 RLLGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLK 120
+ GY + + KA + LG+ P++ + +E LT + L F + P ++ KR E+L
Sbjct: 1108 YISGYSMRMKRNKAMKELGYCPQSDSFFEFLTGRQLLKVFLLIWGFPSKDLNKRCEKLAD 1167
Query: 121 LVGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQ 180
G +K+ +S G K+++ A A L+ LDEP++G+DP R V II E
Sbjct: 1168 QFGFRKHLDKKITYYSGGTKRKINAAVA-CGANSLICLDEPSAGVDPASRRHVWTIINEV 1226
Query: 181 KKQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYEIKVETKQP 240
+QGK V +SH + E+ L K I+V G + +G+++ +K + + ++ V +
Sbjct: 1227 AQQGKAVLLTSHNMDEINALCSKSVILVDGSIYAMGSVQHVKNKIAKGMTLKLVVNVQ-- 1284
Query: 241 FPEIELPD--VIRIEKIADNKVLIFAKSDIRE 270
PD V + KI D+ + + ++++E
Sbjct: 1285 ------PDNMVAMLTKIEDDIYMTYPNAELKE 1310
>gb|AAF49304.2| (AE003522) NUCB1 gene product [Drosophila melanogaster]
Length = 1981
Score = 138 bits (343), Expect = 1e-31
Identities = 75/221 (33%), Positives = 132/221 (58%), Gaps = 1/221 (0%)
Query: 4 IEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSVRLL 63
++I L+K++GK + V N+S ++ +G I +G NGAGKTT I + G I P SG+ +
Sbjct: 857 VQIRGLSKTFGKMEVVKNVSFDMFEGQITVLMGHNGAGKTTLISMLAGFISPTSGTALIN 916
Query: 64 GYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLKLVG 123
G+DI +E +A+ +G P+ +++ L++ ++ F+ + E + ++ LK +
Sbjct: 917 GFDIRQERRQAQRCIGLCPQQNVLFKHLSSVSHIQLFSRLRGLRGAEVKSEVQNYLKKLN 976
Query: 124 LWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQKKQ 183
L + + ++ S G ++RL +A +L ++LI DEP++GLDP R + +ILE K+
Sbjct: 977 LQEKKRLAARNLSGGTQRRLSVACSLCGGVKVLICDEPSTGLDPSARRELWRLILE-AKE 1035
Query: 184 GKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQ 224
G T+ ++H L + E L D+V II G+LR +G+L +KKQ
Sbjct: 1036 GCTILLTTHQLDDGEVLGDRVVIISDGQLRCIGSLPFLKKQ 1076
Score = 128 bits (318), Expect = 9e-29
Identities = 81/272 (29%), Positives = 143/272 (51%), Gaps = 12/272 (4%)
Query: 2 KVIEIENLTKSYGKFK-AVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSV 60
+ + + ++K YG + AV+N+S ++ G LGPNGAGKTTT ++G D G++
Sbjct: 1566 RALVVNGVSKKYGCDQLAVNNISFALKPSHCVGLLGPNGAGKTTTFKMIVGEHSIDKGNI 1625
Query: 61 RLLGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLK 120
+ GY + + KA + LG+ P++ + +E LT + L F + P ++ KR E+L
Sbjct: 1626 YISGYSMRMKRNKAMKELGYCPQSDSFFEFLTGRQLLKVFLLIWGFPSKDLNKRCEKLAD 1685
Query: 121 LVGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQ 180
G +K+ +S G K+++ A A L+ LDEP++G+DP R V II E
Sbjct: 1686 QFGFRKHLDKKITYYSGGTKRKINAAVA-CGANSLICLDEPSAGVDPASRRHVWTIINEV 1744
Query: 181 KKQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYEIKVETKQP 240
+QGK V +SH + E+ L K I+V G + +G+++ +K + + ++ V +
Sbjct: 1745 AQQGKAVLLTSHNMDEINALCSKSVILVDGSIYAMGSVQHVKNKIAKGMTLKLVVNVQ-- 1802
Query: 241 FPEIELPD--VIRIEKIADNKVLIFAKSDIRE 270
PD V + KI D+ + + ++++E
Sbjct: 1803 ------PDNMVAMLTKIEDDIYMTYPNAELKE 1828
>gb|AAG35594.1|AF200948_1 (AF200948) ABC1 transporter [Leishmania tropica]
Length = 1843
Score = 138 bits (343), Expect = 1e-31
Identities = 95/311 (30%), Positives = 154/311 (48%), Gaps = 18/311 (5%)
Query: 3 VIEIENLTKSYGKFK-AVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSVR 61
++ + NL K Y K AV N++L V G +FGFLG NGAGKTTTI + P SG
Sbjct: 1504 LVRVLNLRKEYPNGKVAVRNIALGVRPGEVFGFLGTNGAGKTTTISILCQEFYPTSGRAY 1563
Query: 62 LLGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLKL 121
+ G DI E +A +G+ P+ + LT +L +A I + ++ + L+KL
Sbjct: 1564 VCGNDIVTESSEALRCIGYCPQFDACLDLLTVEEHLYLYAGVRGISSRACDRVVRGLMKL 1623
Query: 122 VGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQK 181
GL + R K S G +++L +A +LI P ++ DEP++G+DP R + + I E
Sbjct: 1624 CGLTEYRRTKSHELSGGNRRKLSVAVSLIGGPRVVFFDEPSAGMDPVARRGLWNAI-ETV 1682
Query: 182 KQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYEIKVETKQPF 241
+V ++H L EVE LA +V I+V G LR +G +K++Y G+E+ V
Sbjct: 1683 ADNCSVVLTTHHLEEVEALAHRVAIMVDGTLRCIGDKTHLKQKYG--TGFEVAVRVADES 1740
Query: 242 PEI----------ELPDVIRIEKIADNKVLIFAKSDIR---EILSEELSKRGITVLSLEI 288
PE+ E P ++ ++ + S +R + E K + + +
Sbjct: 1741 PEVMAGVELFFEEEFPS-SKLTEVRAGRFTYQLPSTVRLSSVFTALEQQKEKLQICDYSV 1799
Query: 289 EEPSLEDVFLK 299
+ S+E VF++
Sbjct: 1800 SQTSIEQVFMR 1810
Score = 125 bits (311), Expect = 6e-28
Identities = 72/218 (33%), Positives = 121/218 (55%), Gaps = 5/218 (2%)
Query: 4 IEIENLTKSYGK----FKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGS 59
+ I L K++ + F AVD+L + +G I LG NGAGK+TT+ M G++ D G
Sbjct: 718 VRIRGLRKTFRRGGKAFAAVDDLCWSLNEGEISVLLGHNGAGKSTTMNLMTGMLEADGGD 777
Query: 60 VRLLGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELL 119
+ G+ + E ++ +G P++ ++ +LT +LD++A+ + EKE I LL
Sbjct: 778 CYVYGHSVRHELSAVRQEIGLCPQHNILWPQLTVREHLDYYAAIKGLRGSEKEDAIRRLL 837
Query: 120 KLVGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILE 179
V L D + K+ S G K++L +A A + L+ILDEPT+G+D GAR +L+
Sbjct: 838 AAVDLEDKEHYMSKALSGGQKRKLSVAVAFVGGSRLVILDEPTAGMD-VGARRHTWSLLK 896
Query: 180 QKKQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGT 217
+ + T+ ++H + E + L D V I+ KG+L+ G+
Sbjct: 897 EMAKWHTILLTTHFMDEADLLGDTVAIMSKGRLQCAGS 934
>gb|AAC44357.1| (U43537) ATP-binding protein involved in mithramycin resistance
[Streptomyces argillaceus]
Length = 320
Score = 137 bits (342), Expect = 1e-31
Identities = 95/311 (30%), Positives = 161/311 (51%), Gaps = 10/311 (3%)
Query: 3 VIEIENLTKSY----GKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSG 58
+I+ + L K++ G +AV + V G I GFLGPNGAGKTTT+ + ++ P SG
Sbjct: 1 MIQAKGLAKTFTTKQGPVEAVAGVDFTVHTGEIVGFLGPNGAGKTTTMRMLTTLLPPSSG 60
Query: 59 SVRLLGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEEL 118
+ + G D+ EP K + +G++ + R+L Y + + E E R +E+
Sbjct: 61 TAVIAGRDLLHEPAKVRTHIGYVSQAGGAKPSSPVRRDLVLQGRLYGMSRSEAEARADEV 120
Query: 119 LKLVGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIIL 178
+ +GL ++ R +++ S +R+ +A L++ PELL LDEPT+ LDP+ V + I
Sbjct: 121 ITQLGLEELADRIIQTLSGCQARRVDMALGLMHQPELLFLDEPTANLDPESRNDVWEHIR 180
Query: 179 E-QKKQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYEIKVET 237
+ ++G TVF ++H L E + L D+V II KG++ + +K + + EI+V
Sbjct: 181 RLRDERGTTVFLTTHYLDEADSLCDRVLIIDKGRIIAEDSPRSLKAA-ISHDTIEIEVAD 239
Query: 238 KQPFPEIELPDVIRIEKIADN-KVLIFAKSDIREILSE---ELSKRGITVLSLEIEEPSL 293
L + +++ N VL + D +L++ L I V SL + +P+L
Sbjct: 240 DTARATELLAAHRDVHEVSVNGTVLSISCRDAERLLADLLRTLESARIRVESLRVLKPTL 299
Query: 294 EDVFLKTIYRR 304
+DVF+ RR
Sbjct: 300 DDVFMTLTDRR 310
>sp|P45073|YHBG_HAEIN PROBABLE ABC TRANSPORTER ATP-BINDING PROTEIN HI1148
>gi|1074660|pir||I64167 hypothetical protein HI1148 -
Haemophilus influenzae (strain Rd KW20)
>gi|1574704|gb|AAC22803.1| (U32794) ABC transporter,
ATP-binding protein [Haemophilus influenzae Rd]
Length = 241
Score = 136 bits (339), Expect = 3e-31
Identities = 73/224 (32%), Positives = 130/224 (57%), Gaps = 3/224 (1%)
Query: 1 MKVIEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSV 60
M ++ ENL KSY K V ++SL V I G LGPNGAGKTTT ++G++ D G +
Sbjct: 1 MSILTAENLAKSYKSRKVVSDVSLTVNSNEIVGLLGPNGAGKTTTFYMVVGLVRQDQGKI 60
Query: 61 RLLGYDIFKEPI--KAKERLGFLPENATIYEELTAWRNLDFFASFY-NIPKQEKEKRIEE 117
+ G DI P+ +A+ +G+LP+ A+I+ LT + NL ++ Q++ ++ +E
Sbjct: 61 VIDGEDISLLPMHNRAQRGIGYLPQEASIFRRLTVYENLMAVLEIRKDLTPQQRREKADE 120
Query: 118 LLKLVGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDII 177
L++ + +R ++ S G ++R+ +A+AL +P+ ++LDEP +G+DP +K II
Sbjct: 121 LIEEFNISHIRDNLGQALSGGERRRVEIARALAANPKFILLDEPFAGVDPISVSDIKKII 180
Query: 178 LEQKKQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEI 221
+ + +G V + H + E ++ ++ I+ GK+ GT E++
Sbjct: 181 TDLRNRGLGVLITDHNVRETLDVCERAYIVGAGKIIATGTPEQV 224
>gb|AAF44814.1|AE003406_19 (AE003416) symbol=BG:DS00797.5; prediction=method:''genscan'',
version:''1.0; Date run: 19-Nov-98; Time: 17:00:23'',
score:''296.08''; cDNA=method:''sim4'', score:''990.0'',
desc:''CK01017 Drosophila melanogaster embryo BlueScript,
full length mRNA seq>
Length = 1544
Score = 136 bits (338), Expect = 4e-31
Identities = 92/320 (28%), Positives = 160/320 (49%), Gaps = 30/320 (9%)
Query: 6 IENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSVRLLGY 65
+ NL K YG AVD +S +G FG LG NGAGKT+T + + D G++R+ G
Sbjct: 1204 VHNLRKRYGDKLAVDGVSFAAAQGECFGLLGVNGAGKTSTFQMIAANLPLDGGTIRIKGA 1263
Query: 66 DIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKE------KRIEELL 119
DI + +K +E G+ P+ + + +TA + L + A + ++ + + ++ L
Sbjct: 1264 DIREHELKYREYFGYCPQYDALNKFMTAEQCLYYMALLRGLSRRRTDGPASCKEHVKYWL 1323
Query: 120 KLVGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILE 179
+ + L + +V+ +S G K++LL A A+I P L++LDEPT+G+DP R + I +
Sbjct: 1324 EKMHLTKYQKVQVRHYSGGTKRKLLAAMAMIGAPALVLLDEPTTGVDPISRRFLWQCIKD 1383
Query: 180 QKKQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYEIKVE--- 236
+ + +TV +SH + E EEL +++ I+ GK + + + +K+ L G+ IK++
Sbjct: 1384 FQGKDRTVVLTSHSMDECEELCNRLAIMAHGKFKCLNNICALKR----LSGFTIKLKMKA 1439
Query: 237 --------------TKQPFPEIELPD--VIRIEKIADNKVLIFAKSDIREILSEELSKR- 279
K FP +EL + + + + S + +I E L R
Sbjct: 1440 DTETEMNVSTITGTLKSEFPGLELRESHAGTLTYFVSTQESVVLWSSVFKIAEEYLGDRL 1499
Query: 280 GITVLSLEIEEPSLEDVFLK 299
V + E +LED+FLK
Sbjct: 1500 SALVADYSVNECTLEDIFLK 1519
Score = 133 bits (331), Expect = 3e-30
Identities = 88/299 (29%), Positives = 158/299 (52%), Gaps = 19/299 (6%)
Query: 20 DNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSVRLLGYDIFKEPIKAKERLG 79
DNL++ + I LG NGAGKTT + ++G++ DSG + + ++ + +G
Sbjct: 428 DNLNMTINNKEITVLLGHNGAGKTTMMNMIMGLVPKDSGKIIVCSE---RDVASYRHLIG 484
Query: 80 FLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLKLVGLWDVRYRKVKSFSKGM 139
F P+++ +T ++L+FFA + + +E LK +GL D R K+ S GM
Sbjct: 485 FCPQHSVFMSYMTCHQHLEFFAQLRGACRSDARDWADEKLKKLGLSDKRNEFGKNLSGGM 544
Query: 140 KQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQKKQGKTVFFSSHILSEVEE 199
K+RL L A+ + +++ILDEP+SGLD R + DI+L +K+ K V ++H + E E
Sbjct: 545 KRRLSLGIAIAGNTKIVILDEPSSGLDINSRRELWDILLNLRKE-KAVLVTTHYMEEAEV 603
Query: 200 LADKVGIIVKGKLRTVGTLEEIKKQYMELEGYEIKVETKQ-PFPEIELPDVI-------R 251
L D + I+ GKL+++G+ E+K++ GY +K+E E+E+ ++I R
Sbjct: 604 LGDTICILANGKLQSIGSPLELKRK--SGIGYRLKLEINDFTSREVEIMEIIHHFVPTAR 661
Query: 252 IEKIADNKVLIFAKSDIREILSE-----ELSKRGITVLSLEIEEPSLEDVFLKTIYRRD 305
+ + + V I + ++ E + + + ++ + + SLEDVFL+ +D
Sbjct: 662 VLNVVNPTVYICLPYAYKNCFAQMLYRLETESKELGIHTISMTDTSLEDVFLRCAGEQD 720
>pir||S42925 probable transport protein - Staphylococcus aureus
>gi|459256|emb|CAA83065.1| (Z30588) Potential ABC
transporter [Staphylococcus aureus]
Length = 231
Score = 135 bits (337), Expect = 5e-31
Identities = 76/223 (34%), Positives = 135/223 (60%), Gaps = 12/223 (5%)
Query: 1 MKVIEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSV 60
M V+ IE+LTK G ++++S ++++G I G +G NGAGKTT + +LG SG+
Sbjct: 1 MDVLTIEHLTKKIGNKTILEDVSFKLKRGQIVGLVGANGAGKTTLMKVILGYSSFQSGNF 60
Query: 61 RLLGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLK 120
++ K +G L EN IY ++ + NL + + + + I++++
Sbjct: 61 NVINSK------DEKSNIGALIENPGIYPFMSGYENLKL------LNESKNTQDIDKIVS 108
Query: 121 LVGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQ 180
+ + + ++K K++S GMKQ+L +A A +N P+ +ILDEP +GLDP+ R V+++I+++
Sbjct: 109 QLHMDEYIHKKAKTYSLGMKQKLGIAIAFLNKPQFIILDEPMNGLDPKAVRDVRELIVQK 168
Query: 181 KKQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKK 223
++G T SSHILSE+ ++ + + II KGK+ T + EE+K+
Sbjct: 169 AQEGVTFLISSHILSELVKITNSILIINKGKIVTETSEEELKQ 211
>pir||T22748 hypothetical protein F55G11.9 - Caenorhabditis elegans
>gi|3877692|emb|CAB05222.1| (Z82272) predicted using
Genefinder~contains similarity to Pfam domain: PF00005
(ABC transporter), Score=329.9, E-value=9.1e-96, N=2
[Caenorhabditis elegans]
Length = 1431
Score = 135 bits (337), Expect = 5e-31
Identities = 76/225 (33%), Positives = 129/225 (56%), Gaps = 8/225 (3%)
Query: 2 KVIEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSVR 61
K++ I L K +GKF+AV+ LS+ V+ FG LG NGAGKTTT + G+ +P G V
Sbjct: 1127 KILVINGLIKDFGKFRAVNGLSVTVDHEECFGMLGANGAGKTTTFDIITGLTMPTGGRVT 1186
Query: 62 LLGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLKL 121
+ G+DI + +G+ P+ + ++++ L A F + ++ +L
Sbjct: 1187 IDGHDISR-----TIHIGYCPQFDAMLQQISCRETLMIMAKFQGYANVSEV--VDLVLDC 1239
Query: 122 VGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQK 181
VG+ D + VK+ S G K+++ + AL++ +ILDEPT+G+DP+ R + DII E +
Sbjct: 1240 VGMADFGNKLVKNCSGGQKRKISVGIALMSRATCIILDEPTAGIDPRARREIWDIIHEMR 1299
Query: 182 KQGK-TVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQY 225
+Q K ++ +SH + E E L ++GI+ G++ +GT + +K QY
Sbjct: 1300 EQAKCSIVLTSHSMEECEALCTRIGILRNGEMIALGTSQSLKSQY 1344
Score = 112 bits (278), Expect = 5e-24
Identities = 69/223 (30%), Positives = 117/223 (51%), Gaps = 2/223 (0%)
Query: 4 IEIENLTKSYGKF-KAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSVRL 62
IE+ L K Y KAV+ LSL +G + LG NG GK+TT + G+ G V +
Sbjct: 447 IELSGLVKVYTNGEKAVNGLSLRAIRGQVSILLGHNGCGKSTTFGMITGMHKATEGRVII 506
Query: 63 LGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLKLV 122
G D A++ +G+ P+ +Y++LT +L + K + + LL+ +
Sbjct: 507 GGIDANSHRAAARKMIGYCPQYNPLYDKLTVMEHLKLVNALKGGSKLTFKVEADSLLQQI 566
Query: 123 GLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQKK 182
L D R K+ S GMK++L + A+I +++LDEPT+G+DP AR+ +L K
Sbjct: 567 ELTDKRDTLAKNLSGGMKRKLCVCMAMIGGSRVILLDEPTAGMDP-SARIDVQRMLALVK 625
Query: 183 QGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQY 225
+T+ ++H + E E+L D + ++ GK+ G+ +K++Y
Sbjct: 626 ADRTILLTTHYMDEAEKLGDWIFVMSHGKMAASGSNHYLKQKY 668
>gb|AAC48716.1| (U90126) ABC transporter [Bos taurus]
Length = 2281
Score = 135 bits (336), Expect = 7e-31
Identities = 91/305 (29%), Positives = 152/305 (49%), Gaps = 16/305 (5%)
Query: 3 VIEIENLTKSYG--KFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSV 60
++ + LTK Y AVD L + V G FG LG NGAGKTTT + G SG
Sbjct: 1935 ILRLNELTKVYSGTSSPAVDRLCVGVRPGECFGLLGVNGAGKTTTFKMLTGDTAVTSGDA 1994
Query: 61 RLLGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLK 120
+ G I + +G+ P+ I + LT +L +A +P +E E+ ++
Sbjct: 1995 TVAGKSILTNISDVHQSMGYCPQFDAIDDLLTGREHLYLYARLRGVPAEEIERVTNWSIQ 2054
Query: 121 LVGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQ 180
+GL R ++S G K++L A ALI P L++LDEPT+G+DPQ R++ + I+
Sbjct: 2055 SLGLSLYADRLAGTYSGGNKRKLSTAIALIGCPPLVLLDEPTTGMDPQARRMLWNTIMGI 2114
Query: 181 KKQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYEIKVETKQP 240
++ + V +SH + E E L ++ I+VKG + +GT++ +K ++ +GY + ++ + P
Sbjct: 2115 IREERAVVLTSHSMEECEALCTRLAIMVKGAFQCLGTIQHLKSKFG--DGYIVTMKIRSP 2172
Query: 241 FPEIELPDVIRIEKIADNKVLIFAKSDIREILSEELSKRGITVLSLEIEEPSLEDVFLKT 300
++ LPD+ +E+ F S RE R L ++ SL +F
Sbjct: 2173 KDDL-LPDLGPVEQFFQGN---FPGSVQRE--------RHYNTLQFQVSSSSLARIFRLL 2220
Query: 301 IYRRD 305
+ +D
Sbjct: 2221 VSHKD 2225
Score = 131 bits (325), Expect = 1e-29
Identities = 72/214 (33%), Positives = 124/214 (57%), Gaps = 3/214 (1%)
Query: 6 IENLTKSYGKF--KAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSVRLL 63
++NL K + + AVD L++ + I FLG NGAGKTTT+ M G++ P SG+V +
Sbjct: 931 VKNLVKIFEPYGRPAVDRLNITFYESQITAFLGHNGAGKTTTLSIMTGLLPPTSGTVLVG 990
Query: 64 GYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLKLVG 123
G DI ++ LG P++ ++ LT ++ F+A E + +E +L+ G
Sbjct: 991 GKDIETNLDAIRQSLGMCPQHNILFHHLTVAEHILFYAQLKGRSWDEAQLEMEAMLEDTG 1050
Query: 124 LWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQKKQ 183
L R + + S G++++L +A A + D ++++LDEPTSG+DP R + D++L+ +
Sbjct: 1051 LHHKRNEEARDLSGGVQRKLSVAIAFVGDAKVVVLDEPTSGVDPYSRRSIWDLLLKY-RS 1109
Query: 184 GKTVFFSSHILSEVEELADKVGIIVKGKLRTVGT 217
G+T+ S+H + E + L D++ II +G+L GT
Sbjct: 1110 GRTIIMSTHHMDEADILGDRIAIISQGRLYCSGT 1143
>pir||A71243 probable maltose/maltodextrin transport ATP-binding protein -
Pyrococcus horikoshii >gi|3256589|dbj|BAA29272.1|
(AP000001) 362aa long hypothetical maltose/maltodextrin
transport ATP-binding protein [Pyrococcus horikoshii]
Length = 362
Score = 134 bits (335), Expect = 9e-31
Identities = 83/275 (30%), Positives = 155/275 (56%), Gaps = 23/275 (8%)
Query: 1 MKVIEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSV 60
M I++EN+ K +G F A++N++L+++ G LGP+G+GK+T + ++ GI P SG +
Sbjct: 1 MVEIKLENIVKKFGNFTALNNINLKIKDGEFMALLGPSGSGKSTLLYTIAGIYKPTSGKI 60
Query: 61 RLLGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLK 120
D+ + P K + +G + +N +Y +T ++N+ F P++E +K++ E+ K
Sbjct: 61 YFDEKDVTELPPKDRN-VGLVFQNWALYPHMTVYKNIAFPLELRKAPREEIDKKVREVAK 119
Query: 121 LVGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILE- 179
++ + + R S G +QR+ +A+AL+ +PE+L+LDEP S LD A L ++ E
Sbjct: 120 MLHIDKLLNRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLD---ALLRLEVRAEL 176
Query: 180 ---QKKQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEI--KKQYMELEGYEIK 234
QK+ G T + +H +E +AD++ +I +G++ VGT +E+ K +Y + G+
Sbjct: 177 KRLQKELGITTVYVTHDQAEALAMADRIAVIREGEILQVGTPDEVYYKPKYKFVGGF--- 233
Query: 235 VETKQPFPEIELPDVIRIE-KIADNKVLIFAKSDI 268
+ P + +E K+ D K++I KS +
Sbjct: 234 ---------LGNPPMNFVEAKVEDGKLVITEKSKL 259
>pir||S42927 probable transport protein - Staphylococcus epidermidis
>gi|459262|emb|CAA83061.1| (Z30586) ABC transporter
(putative) [Staphylococcus epidermidis]
>gi|6594276|dbj|BAA88414.1| (AB016613) ATP-binding
protein [Staphylococcus aureus]
>gi|6594280|dbj|BAA88417.1| (AB016614) ATP-binding
protein [Staphylococcus aureus]
>gi|6594284|dbj|BAA88420.1| (AB016615) ATP-binding
protein [Staphylococcus aureus]
Length = 231
Score = 134 bits (333), Expect = 2e-30
Identities = 76/223 (34%), Positives = 133/223 (59%), Gaps = 12/223 (5%)
Query: 1 MKVIEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSV 60
M V+ +E+LTK G + ++SL +++G I G +G NGAGKT+ + +LG I G+
Sbjct: 1 MDVLTVEHLTKKIGNKTILKDISLNLKRGQIVGLVGANGAGKTSLMKVILGYSIYQEGNF 60
Query: 61 RLLGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLK 120
++ E K +G L EN +Y ++ + NL + + + + I+ ++
Sbjct: 61 EVI------ENKHKKSNVGALIENPGVYPFMSGYDNLKL------LNETKNTQDIDTIVS 108
Query: 121 LVGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQ 180
+ + + + K K++S GMKQ+L +A A +N P+L+ILDEP +GLDP+ R V+++I+++
Sbjct: 109 QLKMDEYIHNKAKTYSLGMKQKLGIAIAFLNQPQLIILDEPMNGLDPRAVRDVRELIVKK 168
Query: 181 KKQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKK 223
++G T SSHILSE+ ++ + + II KGK+ T T EE+ +
Sbjct: 169 AEEGVTFLISSHILSELVKITNSILIINKGKIVTETTEEELNQ 211
>pir||S42931 probable transport protein stpB - Staphylococcus hominis
>gi|459265|emb|CAA83063.1| (Z30587) Potential ABC
transporter [Staphylococcus hominis]
Length = 231
Score = 134 bits (333), Expect = 2e-30
Identities = 77/223 (34%), Positives = 133/223 (59%), Gaps = 12/223 (5%)
Query: 1 MKVIEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSV 60
M V+ +E+LTK G + ++SL +++G I G +G NGAGKT+ + +LG I G+
Sbjct: 1 MDVLTVEHLTKKIGNKTILKDISLNLKRGQIVGLVGANGAGKTSLMKVILGYSIYQEGNF 60
Query: 61 RLLGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLK 120
++ E K +G L EN IY ++ + NL + + + + I+ ++
Sbjct: 61 EVI------ENKHKKSNVGALIENPGIYPFMSGYDNLKL------LNETKNTQDIDTIVS 108
Query: 121 LVGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQ 180
+ + + + K K++S GMKQ+L +A A +N P+L+ILDEP +GLDP+ R V+++I+++
Sbjct: 109 QLKMDEYIHNKAKTYSLGMKQKLGIAIAFLNQPQLIILDEPMNGLDPRAVRDVRELIVKK 168
Query: 181 KKQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKK 223
++G T SSHILSE+ ++ + + II KGK+ T T EE+ +
Sbjct: 169 AEEGITFLISSHILSELVKITNSILIINKGKIVTETTEEELNQ 211
>pir||A70039 ABC transporter (ATP-binding protein) homolog yvfR - Bacillus
subtilis >gi|1945718|emb|CAB08012.1| (Z94043)
hypothetical protein [Bacillus subtilis]
>gi|2635922|emb|CAB15414.1| (Z99121) similar to ABC
transporter (ATP-binding protein) [Bacillus subtilis]
Length = 301
Score = 134 bits (333), Expect = 2e-30
Identities = 89/299 (29%), Positives = 158/299 (52%), Gaps = 15/299 (5%)
Query: 2 KVIEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSVR 61
+ + + N+TK + + AV+N+S +EKG I LGPNGAGKTT + +LG++ P G ++
Sbjct: 4 EAVTVSNVTKHFQRKTAVNNISFSIEKGEIAAILGPNGAGKTTVVSMILGLLKPSEGEIK 63
Query: 62 LLGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLKL 121
L ++ + + +E++G + + ++ L L+ F S+Y P KE L+ L
Sbjct: 64 L--FNRVPDDQQVREKIGVMLQEVSVMPGLKVDEILELFRSYYPNPLSMKE-----LVSL 116
Query: 122 VGLW--DVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILE 179
L D++ R K S G K+RL A AL +PELLILDEPT G+D I
Sbjct: 117 TALTKEDLKTRAEK-LSGGQKRRLSFALALAGNPELLILDEPTVGMDTSSRHRFWQTIHG 175
Query: 180 QKKQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYEIKVETKQ 239
QGKT+ FS+H L E ++ A ++ +G+L G+ +I+ + ++ + + + +
Sbjct: 176 LSDQGKTIIFSTHYLQEADDAAQRILFFTEGQLVADGSPMQIRSR-IQKQSVSFTLHSSE 234
Query: 240 PFPEIEL-PDVIRIEKIADNKVLIFAKSDIREILSEELSKRGITVLSLEIEEPSLEDVF 297
+ P+V R+ I +++ I S+ ++L+ + + I + IE+ +L++ F
Sbjct: 235 SLERLSCHPEVERV--IHEHERTIIQTSNTDKVLA-LIFQENIHARDIRIEQATLDEAF 290
>pir||H69746 ABC transporter (binding protein) homolog ybdA - Bacillus subtilis
>gi|2632481|emb|CAB11989.1| (Z99105) similar to ABC
transporter (binding protein) [Bacillus subtilis]
>gi|3599617|dbj|BAA33092.1| (AB006424) ybdA [Bacillus
subtilis]
Length = 239
Score = 133 bits (332), Expect = 2e-30
Identities = 76/212 (35%), Positives = 123/212 (57%), Gaps = 2/212 (0%)
Query: 1 MKVIEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSV 60
M++++++NL+K Y V++LS +++G I LGPNGAGKTTTI + G+ PD G +
Sbjct: 1 MQLMQVQNLSKCYRNGDGVEHLSFSIQRGEIVALLGPNGAGKTTTIRCLTGLYKPDKGDI 60
Query: 61 RLLGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLK 120
+ G I ++++ +P+ +Y LTA ++ F A Y+ K++ ++R+ LK
Sbjct: 61 LIEGSP--PGDINVQKKVALIPDQPYLYPALTAAEHIQFRARGYHPGKKDVKERVYHALK 118
Query: 121 LVGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQ 180
V L + + S+G KQR++LA A++ D L ILDEPT GLD + + + + +
Sbjct: 119 EVHLEEKANQLCGQLSRGQKQRVVLAGAIVQDALLYILDEPTVGLDIPSKQWLSNWLKTK 178
Query: 181 KKQGKTVFFSSHILSEVEELADKVGIIVKGKL 212
QG + F S+H L V E AD+V +I GKL
Sbjct: 179 TDQGCSAFVSTHSLEFVIETADRVILIRDGKL 210
>pir||E82065 ABC transporter, ATP-binding protein VC2528 [imported] - Vibrio
cholerae (group O1 strain N16961)
>gi|2317737|gb|AAC46369.1| (AF013987) putative ABC
transporter ATP-binding protein [Vibrio cholerae]
>gi|9657111|gb|AAF95669.1| (AE004322) ABC transporter,
ATP-binding protein [Vibrio cholerae]
Length = 241
Score = 132 bits (330), Expect = 4e-30
Identities = 71/224 (31%), Positives = 135/224 (59%), Gaps = 3/224 (1%)
Query: 1 MKVIEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSV 60
M +++ ++L KSY K K V ++SL+VE G I G LGPNGAGKTT+ ++G++ D G++
Sbjct: 1 MAILKAQHLAKSYKKRKVVSDVSLQVESGQIVGLLGPNGAGKTTSFYMIVGLVARDEGTI 60
Query: 61 RLLGYDIFKEPIKAKER--LGFLPENATIYEELTAWRN-LDFFASFYNIPKQEKEKRIEE 117
+ DI P+ ++ R +G+LP+ A+I+ +L+ N + + + +E++ ++E+
Sbjct: 61 TIDDNDISILPMHSRSRMGIGYLPQEASIFRKLSVEDNIMAVLQTREELTHEERQDKLED 120
Query: 118 LLKLVGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDII 177
LL+ + +R + S G ++R+ +A+AL +P+ ++LDEP +G+DP +K II
Sbjct: 121 LLEEFHIQHIRKSAGMALSGGERRRVEIARALAANPQFILLDEPFAGVDPISVIDIKKII 180
Query: 178 LEQKKQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEI 221
+ +G V + H + E ++ +K I+ +G+L GT +++
Sbjct: 181 EHLRDRGLGVLITDHNVRETLDVCEKAYIVSQGRLIAEGTPQDV 224
>gi|11498586 osmoprotection protein (proV) [Archaeoglobus fulgidus]
>gi|7428829|pir||E69372 osmoprotection protein (proV)
homolog - Archaeoglobus fulgidus
>gi|2649615|gb|AAB90260.1| (AE001036) osmoprotection
protein (proV) [Archaeoglobus fulgidus]
Length = 361
Score = 132 bits (329), Expect = 5e-30
Identities = 96/307 (31%), Positives = 165/307 (53%), Gaps = 15/307 (4%)
Query: 4 IEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSVRLL 63
+ +EN++K YG F AV L+L VE G + +GP+G+GKTTT+ + ++ PD G V +
Sbjct: 9 VVLENVSKRYGNFFAVRELNLTVEGGELLALIGPSGSGKTTTLRMINRLVEPDEGRVLIN 68
Query: 64 GYDIFK-EPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLKLV 122
G DI + + ++ + +G++ + ++ + W N+ +++ +R++ELLKLV
Sbjct: 69 GQDISEIDAVRLRRNIGYVIQQIGLFPHMKVWENIGLIPKLEGWEEEKIRQRVDELLKLV 128
Query: 123 GL-WDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQK 181
L + R S G +QR+ LA+AL +P LL++DEP LDP + +++ K
Sbjct: 129 DLPIEFAERYPWQLSGGQQQRVGLARALALNPPLLLMDEPFGALDPILRKQLQEEFARIK 188
Query: 182 KQ-GKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYEIKVETKQP 240
++ GKT+ F +H + E L D++ I+ +G+L VG EE+ E E ++
Sbjct: 189 EELGKTIVFVTHDVEEAFRLGDRIAIMNEGRLVQVGEPEELIINPAN-EFVEDITGARRK 247
Query: 241 FPEIELPDVIRIE--KIADNKVLIFAKSDIREILSEELSKRGITVLSLEIEEPSLEDVFL 298
F + D ++++ I+ K LI ++ E L +E KRG+ V L+ S VFL
Sbjct: 248 FRHL---DTLKVKDFMISAEKYLI-QNMEVAEAL-KEFRKRGVEVGFLD----SGRAVFL 298
Query: 299 KTIYRRD 305
K I R+
Sbjct: 299 KDIAGRE 305
>gb|AAF50837.1| (AE003568) CG1718 gene product [Drosophila melanogaster]
Length = 1713
Score = 132 bits (329), Expect = 5e-30
Identities = 72/222 (32%), Positives = 127/222 (56%), Gaps = 1/222 (0%)
Query: 4 IEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSVRLL 63
+++ +L K +G V LS+ + + I LG NGAGKTTTI + G+ P SG+ +
Sbjct: 516 LQMRHLKKRFGNKMVVKGLSMNMFEDEITVLLGHNGAGKTTTISMLTGMFPPTSGTAIIN 575
Query: 64 GYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLKLVG 123
G DI A+ LG P++ +++E++ ++ FF+ + + E+ + + LK++
Sbjct: 576 GSDIRTNIEGARMSLGICPQHNVLFDEMSVSNHIRFFSRMKGLRGKAVEQEVAKYLKMIE 635
Query: 124 LWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQKKQ 183
L D S GMK++L + AL D ++++ DEP+SG+DP R + D +L+Q+K
Sbjct: 636 LEDKANVASSKLSGGMKRKLSVCCALCGDTKVVLCDEPSSGMDPSARRQLWD-LLQQEKV 694
Query: 184 GKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQY 225
G+T+ ++H + E + L D++ I+ G+L+ GT +KKQY
Sbjct: 695 GRTLLLTTHFMDEADVLGDRIAIMCDGELKCQGTSFFLKKQY 736
Score = 126 bits (314), Expect = 3e-28
Identities = 77/293 (26%), Positives = 153/293 (51%), Gaps = 14/293 (4%)
Query: 2 KVIEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSVR 61
K + ++ +TK YG+F AV+ +SL V++ FG LG NGAGKTTT M G SG+
Sbjct: 1366 KNLVLDRVTKYYGQFMAVNQVSLCVQEVECFGLLGVNGAGKTTTFKMMTGDERISSGAAY 1425
Query: 62 LLGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLKL 121
+ G + + +G+ P+ + ++LT L F + + + E+L K
Sbjct: 1426 VQGLSLESNMNSIYKMIGYCPQFDALLDDLTGREVLRIFCMLRGVQESRIRQLSEDLAKS 1485
Query: 122 VGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQK 181
G ++ ++S G K++L A A+I P ++ LDEPT+G+DP R + +++ +
Sbjct: 1486 FGFMKHIDKQTHAYSGGNKRKLSTAIAVIGSPSVIYLDEPTTGMDPAARRQLWNMVCRIR 1545
Query: 182 KQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYEIKVETKQPF 241
GK++ +SH + E E L ++ I+V G+ + +G+ + +K ++ +G +K++ ++
Sbjct: 1546 DSGKSIVLTSHSMEECEALCTRLAIMVNGEFKCIGSTQHLKNKFS--KGLILKIKVRRNL 1603
Query: 242 PEIELPDVIRIEKIADNKVLIFAKSDIREILSEELSKRGITVLS--LEIEEPS 292
+ +R +++ +A++ + + ++S+R I + +E E P+
Sbjct: 1604 ------EALRQARLSGG----YARNPDEQTVPAQMSQRDIDAVKEFVETEYPN 1646
>gb|AAA21451.1| (U01058) ABC family transporter [Entamoeba histolytica]
Length = 808
Score = 131 bits (326), Expect = 1e-29
Identities = 98/316 (31%), Positives = 163/316 (51%), Gaps = 28/316 (8%)
Query: 6 IENLTKSYGKF----KAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSVR 61
I LTK++ + AV+ L LEV FG LG NGAGKTTTI + G+I P+ GS
Sbjct: 491 INGLTKTFKQLGNTQTAVNQLCLEVGNET-FGLLGQNGAGKTTTISMLTGLIEPNGGSAT 549
Query: 62 LLGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLKL 121
+ GY+I +G P+ ++ +LT + + F+ + K + +L+
Sbjct: 550 VCGYNIHNSMEDVHTVVGVCPQFDVLWPDLTTYEIILFYCRLKGHFLKSKSV-AKHILED 608
Query: 122 VGLWD-----VRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDI 176
VGLW + R+ S GM++RL +A A+ +P+++ LDEPT+GLD R V D+
Sbjct: 609 VGLWSDKDPKPQNRRSSQLSGGMRRRLSIAIAMTGNPKVIFLDEPTTGLDVAIRRDVWDL 668
Query: 177 ILEQKKQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYEIKVE 236
IL+ ++ + + ++H + E + L D+VGI+ G L +GT + I+ Y GY IK+
Sbjct: 669 ILKIQR-NRCIIITTHSMEEADVLCDRVGIMSDGDLIALGTCQRIRNHY--APGYYIKIA 725
Query: 237 TKQPFPEIELPDVIR------IEKIADNKVLI----FAKSDIREILSEELS-KRGITVLS 285
+++ IE+ + ++ +E + +L K + I SE L K + +
Sbjct: 726 SEE---RIEVTNFLKQLLGEDVEVKEERGILTAMIPIDKKRLSNIFSEVLEHKEELKIED 782
Query: 286 LEIEEPSLEDVFLKTI 301
EI++ LED F++ I
Sbjct: 783 WEIQQKGLEDAFIEII 798
>pir||G71905 probable ABC transporter, ATP-binding protein - Helicobacter pylori
(strain J99) >gi|4155205|gb|AAD06229.1| (AE001497)
putative abc transporter, ATP-binding protein
[Helicobacter pylori J99]
Length = 240
Score = 131 bits (325), Expect = 1e-29
Identities = 76/223 (34%), Positives = 122/223 (54%), Gaps = 2/223 (0%)
Query: 1 MKVIEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSV 60
M +++ E+L K K K V ++SLEV+ G + G LGPNGAGKTTT + G++ P GSV
Sbjct: 1 MDILKAEHLNKQIKKTKIVSDVSLEVKSGEVVGLLGPNGAGKTTTFYMICGLLEPSGGSV 60
Query: 61 RLLGYDIFKEPIKAKERL--GFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEEL 118
L D+ K P+ + L G+LP+ ++I++EL+ NL +E E+++E L
Sbjct: 61 YLNDVDLAKYPLHKRSNLGIGYLPQESSIFKELSVEENLALAGESTFKNSKESEEKMESL 120
Query: 119 LKLVGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIIL 178
L + +R RK S S G ++R+ +A+AL+ +P+ ++LDEP +G+DP ++ II
Sbjct: 121 LDAFNIQAIRERKGMSLSGGERRRVEIARALMKNPKFVLLDEPFAGVDPIAVIDIQRIIE 180
Query: 179 EQKKQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEI 221
V + H + E + + +I G L G EI
Sbjct: 181 SLIGLNIGVLITDHNVRETLSVCHRAYVIKSGTLLASGNANEI 223
>gb|AAF33771.1|AF219259_4 (AF219259) YhbG [Haemophilus ducreyi]
Length = 241
Score = 130 bits (324), Expect = 2e-29
Identities = 75/224 (33%), Positives = 129/224 (57%), Gaps = 3/224 (1%)
Query: 1 MKVIEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSV 60
M + E+L KSY + V ++SL V+ G I G LGPNGAGKTTT ++G++ D G +
Sbjct: 1 MPTLYAEHLAKSYKNRQVVKDVSLNVKAGEIIGLLGPNGAGKTTTFYMVVGLVRHDQGKI 60
Query: 61 RLLGYDIFKEPI--KAKERLGFLPENATIYEELTAWRNLDFFASFY-NIPKQEKEKRIEE 117
R+ DI P+ +AK +G+LP+ A+I+ L+ + NL ++ Q+++ R EE
Sbjct: 61 RIDDQDISVLPMHDRAKYGIGYLPQEASIFHRLSVYDNLMAVLQVRKDLNNQQRKDRAEE 120
Query: 118 LLKLVGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDII 177
L+ + +R ++ S G ++R+ +A+AL +P+ ++LDEP +G+DP +K II
Sbjct: 121 LISEFHIEHIRDNLGQALSGGERRRVEIARALAANPQFILLDEPFAGVDPISVIDIKKII 180
Query: 178 LEQKKQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEI 221
+ K++G V + H + E + + I+ G++ GT E+I
Sbjct: 181 VHLKQRGLGVLITDHNVRETLNVCQRAYIVGSGQMIANGTPEQI 224
>gb|AAK43169.1| Arabinose ABC transporter, ATP-binding protein [Sulfolobus
solfataricus]
Length = 371
Score = 129 bits (322), Expect = 3e-29
Identities = 80/235 (34%), Positives = 129/235 (54%), Gaps = 19/235 (8%)
Query: 1 MKVIEIENLTKSYGK----FKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPD 56
M I +ENL+K + K KAVDN+S+ ++ G+ FG LGP+G GKTT + + G+ P
Sbjct: 1 MTTIRVENLSKIFKKGKTEVKAVDNVSITIDSGMAFGVLGPSGHGKTTFLRLIAGLEEPT 60
Query: 57 SGSVRLLGYDIFKEPIKAKERLGFLPE---------NATIYEELTAWRNLDFFASFYNIP 107
SG + +D E + + R+ PE N +Y +T + N+ F +P
Sbjct: 61 SGYIY---FD--NEAVSSPRRVMMSPEKRGIAMVFQNWALYPNMTVFDNIAFPLKLAKVP 115
Query: 108 KQEKEKRIEELLKLVGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDP 167
K + E +++E+ + +GL V R K S G QR +A+AL+ DP++L+LDEP S LD
Sbjct: 116 KDKIENKVKEVSEELGLSGVLNRYPKELSGGQMQRTAIARALVKDPKVLLLDEPFSNLDA 175
Query: 168 QGARLVKDIILE-QKKQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEI 221
Q + ++ + Q+++ T SH +++ +A+K G+IV GK +GT EI
Sbjct: 176 QIRESARALVRKIQRERKLTTLIVSHDPADIFAIANKAGVIVNGKFAQIGTPTEI 230
>gb|AAD32038.1|AF093787_6 (AF093787) ABC transporter homolog CylA [Streptococcus agalactiae]
Length = 309
Score = 129 bits (322), Expect = 3e-29
Identities = 75/307 (24%), Positives = 165/307 (53%), Gaps = 10/307 (3%)
Query: 4 IEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSVRLL 63
I+++N+ K YG F+A+ +++L E+G +G LGPNGAGKTT ++ SG ++
Sbjct: 3 IKLKNIGKKYGSFEALRDINLIFEEGKFYGLLGPNGAGKTTLFNPLIQNFKQTSGDIK-- 60
Query: 64 GYDIFKEPIKAKE---RLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLK 120
+++ +P+ K+ +G + ++ + + LT NL + Y + K + R+++L
Sbjct: 61 -WEVDGKPLSIKDFYRHIGIVFQSNRLDDNLTVEENLISRGALYGLSKSQVRNRLKDLQT 119
Query: 121 LVGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQ 180
+ + ++ +K S S G K+++ +A+AL+ P LL+LDEPT+GLDPQ R + D I +
Sbjct: 120 YLDITAIKKQKYGSLSGGQKRKVDIARALLPQPSLLLLDEPTTGLDPQSRRDLWDAIAQL 179
Query: 181 KKQGK-TVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYEIKVETKQ 239
+Q + TV +H L E+ D + ++++G + G ++ +Q+ + ++ ++
Sbjct: 180 NQQSQMTVVLITHYLEEM-SACDVLNVLIEGNIYYSGDIKSFIEQH-STTNLNVVLKPEK 237
Query: 240 PFPEIELPDVIRIEKIADNKVLIFAKSDIREILSEELSKRGITVL-SLEIEEPSLEDVFL 298
++ + D + ++ + ++F + E++ + +++ + +E +LE +L
Sbjct: 238 SLDQLSIADFVNKCQVLSEREIVFKDISVEEMMQVISDNQDKSIIETFNVEYSNLEAAYL 297
Query: 299 KTIYRRD 305
+ ++
Sbjct: 298 NLLREKE 304
>pir||E72378 sugar ABC transporter, ATP-binding protein - Thermotoga maritima
(strain MSB8) >gi|4980927|gb|AAD35506.1|AE001721_5
(AE001721) sugar ABC transporter, ATP-binding protein
[Thermotoga maritima]
Length = 359
Score = 129 bits (322), Expect = 3e-29
Identities = 86/273 (31%), Positives = 143/273 (51%), Gaps = 21/273 (7%)
Query: 1 MKVIEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSV 60
M I + NL K +GK KAVD +S EV+ G LGP+G GKTTT+L + GI P SG +
Sbjct: 1 MPSIRVVNLKKYFGKVKAVDGVSFEVKDGEFVALLGPSGCGKTTTLLMLAGIYKPTSGEI 60
Query: 61 RLLGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLK 120
+ P K +E +G + +N +Y +T + N+ F I K E EKR+ E+ +
Sbjct: 61 YFDDVLVNDIPPKYRE-VGMVFQNYALYPHMTVFENIAFPLRARRISKDEVEKRVVEIAR 119
Query: 121 LVGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVK-DIILE 179
+ + ++ RK S G +QR+ LA+AL+ P++L+ DEP S LD +++ +I
Sbjct: 120 KLLIDNLLDRKPTQLSGGQQQRVALARALVKQPKVLLFDEPLSNLDANLRMIMRAEIKHL 179
Query: 180 QKKQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEI----KKQYME-------- 227
Q++ G T + +H +E +A ++ + +GKL GT +E+ K ++
Sbjct: 180 QQELGITSVYVTHDQAEAMTMASRIAVFNQGKLVQYGTPDEVYDSPKNMFVASFIGNPPT 239
Query: 228 --LEGYEIKVETKQPFPE-----IELPDVIRIE 253
L + + VE KQ + I+LP+ + ++
Sbjct: 240 NFLRDFSVSVENKQTILKRDDVIIKLPEPVDVK 272
>pir||C64609 ABC transporter, ATP-binding protein - Helicobacter pylori (strain
26695) >gi|2313839|gb|AAD07765.1| (AE000584) ABC
transporter, ATP-binding protein [Helicobacter pylori
26695]
Length = 240
Score = 129 bits (321), Expect = 4e-29
Identities = 75/223 (33%), Positives = 122/223 (54%), Gaps = 2/223 (0%)
Query: 1 MKVIEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSV 60
M +++ E+L K K K V ++SLEV+ G + G LGPNGAGKTTT + G++ P GSV
Sbjct: 1 MDILKAEHLNKQIKKTKIVSDVSLEVKSGEVVGLLGPNGAGKTTTFYMICGLLEPSGGSV 60
Query: 61 RLLGYDIFKEPIKAKERL--GFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEEL 118
L ++ K P+ + L G+LP+ ++I++EL+ NL +E E+++E L
Sbjct: 61 YLNDVNLAKYPLHKRSNLGIGYLPQESSIFKELSVEENLALAGESTFKNSKESEEKMESL 120
Query: 119 LKLVGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIIL 178
L + +R RK S S G ++R+ +A+AL+ +P+ ++LDEP +G+DP ++ II
Sbjct: 121 LDAFNIQAIRERKGMSLSGGERRRVEIARALMKNPKFVLLDEPFAGVDPIAVIDIQKIIE 180
Query: 179 EQKKQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEI 221
V + H + E + + +I G L G EI
Sbjct: 181 SLIGLNIGVLITDHNVRETLSVCHRAYVIKSGTLLASGNANEI 223
>pir||C72615 probable transport ATP-binding protein APE1380 - Aeropyrum pernix
(strain K1) >gi|5105063|dbj|BAA80377.1| (AP000061) 316aa
long hypothetical transport ATP-binding protein
[Aeropyrum pernix]
Length = 316
Score = 129 bits (321), Expect = 4e-29
Identities = 95/300 (31%), Positives = 155/300 (51%), Gaps = 13/300 (4%)
Query: 9 LTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSVRLLGYDIF 68
L+K +G+ A N+ GI+ G LGPNGAGKTT + ++LG++ P +G + + G +
Sbjct: 14 LSKRFGQRYAYRNVEFTFTSGIL-GVLGPNGAGKTTLLKTILGLVKPSAGEILVEGVNPR 72
Query: 69 KEPI-KAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLKLVGLWDV 127
K R+G++PE + T L+ A E R E L++VGL
Sbjct: 73 SPGFEKLLPRIGYVPELPVVPLWTTPCILLETLARLEGYTSVEARVRAREALEVVGLAGE 132
Query: 128 RYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQKKQGKTV 187
+ SKG ++R+L+AQA I + ELL+LDEP SGLDP+ V++++ ++G TV
Sbjct: 133 CETPIGKLSKGARKRVLVAQAFIGERELLVLDEPYSGLDPEWVYRVRELLRTVAREGATV 192
Query: 188 FFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGY-EIKVETKQPFPEIEL 246
SSHIL E+E++A V +++K G++EE++ L G I + +P +E+
Sbjct: 193 IVSSHILRELEDIATHV-LVLKTDQLFYGSIEELRAW---LSGTPRIILSVAEPERAVEV 248
Query: 247 P-----DVIRIEKIADNKVLIFAKSDIREILSEELSKRGITVLSLEIEEPSLEDVFLKTI 301
+ I K V + D +LS L++ I + +E+ SLE+ +LK +
Sbjct: 249 LRRGGFNAYTINKGGQLVVAVEGADDPARVLSLLLAE-NIEISEYRVEKASLEEAYLKLV 307
>pir||E71123 probable sugar transport ATP-binding protein - Pyrococcus
horikoshii >gi|3257164|dbj|BAA29847.1| (AP000003) 357aa
long hypothetical sugar transport ATP-binding protein
[Pyrococcus horikoshii]
Length = 357
Score = 129 bits (320), Expect = 5e-29
Identities = 89/305 (29%), Positives = 154/305 (50%), Gaps = 22/305 (7%)
Query: 1 MKVIEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSV 60
M + ++N+TK +G AV+ L+LEV+ G LGP+G GK+TT+ + G+ P G +
Sbjct: 1 MARVLLKNVTKVFGDVVAVNKLNLEVKDGEFMVLLGPSGCGKSTTLRLIAGLETPTEGEI 60
Query: 61 RLLGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLK 120
+G + + K + + +N +Y +T + N++F +PK E+ K+++E+
Sbjct: 61 -WIGDKLVNDIDPTKRNVAMVFQNYALYPHMTVFGNIEFPLKMAGVPKSERIKKVKEIAD 119
Query: 121 LVGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQ 180
+G+ D+ RK S G +QR+ LA+AL+ +PE+ +LDEP S LD A++ + E
Sbjct: 120 FLGIGDLLNRKPSELSGGQQQRVALARALVREPEVFLLDEPLSNLD---AKIRTQMRFEL 176
Query: 181 KKQGK-----TVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYEIKV 235
KK T + +H E +AD++ ++ KG ++ VGT +EI Y+ K
Sbjct: 177 KKLLSYDLKITTIYVTHDQVEAMTMADRIAVMNKGVIQQVGTPDEI--------FYKPKN 228
Query: 236 ETKQPFPEIELPDVIRIEKIADNKVLIFAKSDIREILSEELSKRGITVLS-----LEIEE 290
F ++I E I + +IF + L E+L+ G +L +E+ E
Sbjct: 229 TFVATFVGSPQMNLIEGEIIKKDGKVIFDCGEFSLRLPEDLNIEGRVILGFRPQHVEVSE 288
Query: 291 PSLED 295
ED
Sbjct: 289 MPRED 293
>gi|10957143 Potential ABC transporter [Lactococcus lactis]
>gi|11346268|pir||T43103 ABC transport protein -
Lactococcus lactis plasmid pMRC01
>gi|3582213|gb|AAC56009.1| (AE001272) Potential ABC
transporter [Lactococcus lactis]
Length = 298
Score = 128 bits (319), Expect = 7e-29
Identities = 82/211 (38%), Positives = 117/211 (54%), Gaps = 4/211 (1%)
Query: 1 MKVIEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSV 60
++V + NL+ K K + N+S + I G +G NG+GKTT + S+LG+I SG +
Sbjct: 5 IEVFSVNNLSTQIRKKKILKNVSFKGNTSQIIGLVGANGSGKTTIMKSILGLI-KFSGEI 63
Query: 61 RLLGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLK 120
+ +I R+G L E IY LT +L F+ Q I + LK
Sbjct: 64 EISKINILFNNHPILSRVGSLIEEPGIYPFLTGREHLQCFSILKGKEAQSDINEIIDQLK 123
Query: 121 LVGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQ 180
L D K S+S GMKQ+L +A AL+N P L+ILDEP +GLD Q ++DII+ +
Sbjct: 124 LTTFID---EKASSYSLGMKQKLAIAIALLNKPILVILDEPMNGLDIQSIHDLRDIIINK 180
Query: 181 KKQGKTVFFSSHILSEVEELADKVGIIVKGK 211
K QG T SSH+LSE+E++AD++ II GK
Sbjct: 181 KNQGVTFVISSHLLSELEKVADQLVIIKDGK 211
>emb|CAB94554.1| (AL359152) putative ABC transporter, ATP-binding subunit
[Streptomyces coelicolor A3(2)]
Length = 260
Score = 128 bits (319), Expect = 7e-29
Identities = 71/230 (30%), Positives = 125/230 (53%), Gaps = 5/230 (2%)
Query: 1 MKVIEIENLTKSY----GKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPD 56
M +I L +++ G +AV + L V +G I GFLGPNGAGKTTT+ + ++ P
Sbjct: 1 MAIISTAGLARTFATRRGPVEAVRGIDLTVREGEILGFLGPNGAGKTTTLRMLTTLLAPT 60
Query: 57 SGSVRLLGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIE 116
G+ + G+D+ +P + G++ ++ + ++T L Y + + +R
Sbjct: 61 GGAATVAGHDLATDPAGVRAACGYVAQSGGVDPQITVREELVTQGRLYRLSRARAAERAG 120
Query: 117 ELLKLVGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDI 176
EL + +GL + R+ + S G ++RL +A AL + P++L LDEPT+GLDP + D+
Sbjct: 121 ELARDLGLTGLLDRRCGALSGGQRRRLDIAMALTHRPKVLFLDEPTTGLDPGSRADLWDL 180
Query: 177 ILE-QKKQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQY 225
+ + G TVF ++H L E + L+D++ ++ G + GT +K +Y
Sbjct: 181 VRRLRDAHGTTVFLTTHYLDEADALSDRLVVVDGGTVVAEGTPAALKLEY 230
>gi|11499564 ABC transporter, ATP-binding protein [Archaeoglobus fulgidus]
>gi|7445711|pir||E69497 ABC transporter, ATP-binding
protein homolog - Archaeoglobus fulgidus
>gi|2648557|gb|AAB89272.1| (AE000966) ABC transporter,
ATP-binding protein [Archaeoglobus fulgidus]
Length = 253
Score = 128 bits (318), Expect = 9e-29
Identities = 78/230 (33%), Positives = 125/230 (53%), Gaps = 5/230 (2%)
Query: 1 MKVIEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSV 60
MKVIE +++ SY + + +L+L + +G LGPNGAGK+T + +LG++ P G+V
Sbjct: 1 MKVIEFYDVSFSYNSSEVLSDLNLGIGRGEFVAVLGPNGAGKSTMLRLILGLLKPTKGTV 60
Query: 61 RLLGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLK 120
++LGY+ F E K R+G+LP+ I E + K+ + ++ E L
Sbjct: 61 KVLGYNAFDERDKFVGRVGYLPQREEILLEAPLTVSQVIKLPLLARGKKVGDSKLREALS 120
Query: 121 LVGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQ 180
+VGL + S G +Q++LLA+ALI+DPE+L+LDEP +G+D + +++ E
Sbjct: 121 MVGLDGFGDKLFSELSGGQQQKVLLARALISDPEILLLDEPFNGVDVPSQEKIVEVLAEM 180
Query: 181 KKQGKTVFFSSHILSEVEELADKV-----GIIVKGKLRTVGTLEEIKKQY 225
+GKTV H ++ + D+V II GK V + E I K Y
Sbjct: 181 SSKGKTVVAVVHNINPLLHNIDRVVLLNRRIIAAGKPNEVFSEENIIKAY 230
>gi|10956099 ABC transporter subunit PenJ [Pediococcus pentosaceus]
>gi|10956122|ref|NP_037574.1| putative ABC transporter
ATP-binding subunit [Pediococcus pentosaceus]
>gi|4587878|gb|AAD25904.1|AF069302_13 (AF069302) ABC
transporter subunit PenJ [Pediococcus pentosaceus]
>gi|5091680|gb|AAD39627.1|AF033858_10 (AF033858)
putative ABC transporter ATP-binding subunit
[Pediococcus pentosaceus]
Length = 292
Score = 128 bits (318), Expect = 9e-29
Identities = 94/279 (33%), Positives = 150/279 (53%), Gaps = 29/279 (10%)
Query: 1 MKVIEIENLTKSYGKFKAVDNLSLEV--EKGIIFGFLGPNGAGKTTTILSMLGIIIPDSG 58
M ++EI N+T + A+DN+SLE+ E G+ +GPNGAGKTT I ++G+ G
Sbjct: 1 MNLLEINNITMKFPMKVALDNISLEISDESGVT-ALIGPNGAGKTTLIKCIMGLNQEYEG 59
Query: 59 SVRLLGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEEL 118
S+ + ++ + P+ LTA + A+ + + R +L
Sbjct: 60 SI-----------VYQTNKISYCPDTPFFDTNLTAIEVMQQSAALSSQNYELHSAR--KL 106
Query: 119 LKLVGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIIL 178
LK+VGL + R R + FS+GM QRL +A +LI DPE+LILDEPTS LDP G R + +I
Sbjct: 107 LKMVGLDEARDRFINGFSRGMLQRLGIAASLILDPEVLILDEPTSALDPAGQRDILKLIK 166
Query: 179 EQKKQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYE--IKVE 236
K + V SSH L ++E++AD + ++ +GKL G L + +++LE E +K
Sbjct: 167 TISKD-RAVIVSSHNLKDMEQIADNLIVLNEGKLVYAGNL----RDFIDLESIESVLKCS 221
Query: 237 TKQPFPEIEL---PDV-IRIEKIADNKVLIFAKSDIREI 271
T + + + P+V IRI D + F ++D +++
Sbjct: 222 TSENLNRLTILLRPNVPIRISN--DTNTIYFPQNDFQKV 258
>gb|AAG21390.1|AF302051_4 (AF302051) ABC transporter ATP binding subunit [Bacillus
licheniformis]
Length = 299
Score = 128 bits (318), Expect = 9e-29
Identities = 90/307 (29%), Positives = 157/307 (50%), Gaps = 16/307 (5%)
Query: 3 VIEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSVRL 62
V+ + N+TK++ + AVD + ++KG I LGPNGAGKTTTI +LG++ P +G++ L
Sbjct: 4 VVSLTNVTKTFRQKTAVDQIDFSIKKGEIVAILGPNGAGKTTTISMILGLLKPTAGNITL 63
Query: 63 LGYDIFKEPIKAKERLGFLPENATIYEELTAWRNL-DFFASFYNIPKQEKEKRIEELLKL 121
+D + +E++G + + ++ L + + S+Y P ++L L
Sbjct: 64 --FDSMPHEKRVREKIGTMLQEVSVMPGLRCRVEIIELIRSYYPKPLS-----FQKLRTL 116
Query: 122 VGLWDVRYR-KVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQ 180
GL D + + + S G K+RL A AL DPEL+I DEPT G+D +
Sbjct: 117 TGLTDKDLKTQAEKLSGGQKRRLGFALALAGDPELMIFDEPTVGMDITSRNRFWQTVQSL 176
Query: 181 KKQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYEIKVETKQP 240
+QGKT+ FS+H L E ++ A ++ + GK+ GT +IK + + V+ +Q
Sbjct: 177 AEQGKTIIFSTHYLQEADDAAQRILLFKDGKIVADGTPLQIKSR-ISKHSVSFIVDPEQS 235
Query: 241 FPEI-ELPDVIRIEKIADNKVLIFAKSD-IREILSEELSKRGITVLSLEIEEPSLEDVFL 298
++ + P+ +I + + + A +D I E++ E I ++IE +LE+ F
Sbjct: 236 LEKLYQHPETEQIFRKNNRVYIDTANTDKILELIFSE----KIGAYDIQIERGNLEEAFR 291
Query: 299 KTIYRRD 305
+ + D
Sbjct: 292 QLTSKGD 298
>sp|P24693|YHBG_THIFE PROBABLE ABC TRANSPORTER ATP-BINDING PROTEIN IN NTRA/RPON 5'REGION
(ORF1) >gi|97388|pir||A37761 hypothetical protein 1
(ntrA 5' region) - Thiobacillus ferrooxidans
>gi|154643|gb|AAA27378.1| (M58480) 5' end potential;
putative [Acidithiobacillus ferrooxidans]
Length = 241
Score = 127 bits (316), Expect = 2e-28
Identities = 73/232 (31%), Positives = 132/232 (56%), Gaps = 2/232 (0%)
Query: 2 KVIEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSVR 61
++++ ++L KSY + V ++S++V G + G LGPNGAGKTTT M+G++ PD G +
Sbjct: 3 ELLQAQSLFKSYRRRVVVRDVSVQVATGEVVGLLGPNGAGKTTTFYMMVGLVRPDRGHIF 62
Query: 62 LLGYDIFKEPIKAKER--LGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELL 119
L DI P+ + R LG+LP+ +++ +++A N+ + E+++R E+LL
Sbjct: 63 LQQRDITALPMHERARMGLGYLPQEPSVFRQMSAADNVLAVLETLPLSPVERQERQEQLL 122
Query: 120 KLVGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILE 179
+ L +R K S S G ++R+ +A+AL P ++LDEP +G+DP ++ +I +
Sbjct: 123 SELHLHALRDTKGHSLSGGERRRVEIARALAMSPRFILLDEPFAGIDPISVLEIQRLIRD 182
Query: 180 QKKQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGY 231
+ +G V + H + E + ++ I+ GK+ T G+ +EI M + Y
Sbjct: 183 LRARGIGVLITDHNVRETLGICERAYILHDGKVLTAGSPQEIVDDPMVRQVY 234
>pir||G71271 probable ABC transporter natA - syphilis spirochete
>gi|3323192|gb|AAC65843.1| (AE001257) ABC transporter,
ATP-binding protein (natA) [Treponema pallidum]
Length = 268
Score = 125 bits (311), Expect = 6e-28
Identities = 76/225 (33%), Positives = 126/225 (55%), Gaps = 7/225 (3%)
Query: 1 MKVIEIENLTKSYGK----FKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPD 56
M+V+ + +LTK YG + ++++ VE+G + G LG NGAGK+T + + G+I P
Sbjct: 1 MEVLRVTSLTKHYGSRRHPVRGCEDVTFCVERGQVCGILGLNGAGKSTVLRVIGGLIHPS 60
Query: 57 SGSVRLLGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIE 116
SG V + + P+ + +G L E +Y ++T +++ F A + + + E R
Sbjct: 61 SGEVYACHCSLSRYPVGYRRHIGVLHEQNPLYADMTVEQHILFVARIFQLA--DGEARTA 118
Query: 117 ELLKLVGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDI 176
E+++L L V +R+V++ SKG KQR+ LAQAL++ P+LL+LDEP SGLD +
Sbjct: 119 EMIELFQLQSVAHRRVRNLSKGYKQRVGLAQALVHRPKLLVLDEPLSGLDIVYLKEFHKE 178
Query: 177 ILEQKKQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEI 221
I+ Q V FS+H + E+E L D ++ G + G +I
Sbjct: 179 IVAQ-NNNLAVVFSTHAVQEIEALCDVFVLLHAGHVLFSGNRAQI 222
>gi|10954682 probable mikimopine transporter gene~similar to potA gene
[Agrobacterium rhizogenes] >gi|8918682|dbj|BAA97747.1|
(AB039932) hypothetical ABC-transporter gene~similar to
potA gene [Agrobacterium rhizogenes]
>gi|10567346|dbj|BAB16155.1| (AP002086) probable
mikimopine transporter gene~similar to potA gene
[Agrobacterium rhizogenes]
Length = 352
Score = 125 bits (311), Expect = 6e-28
Identities = 70/225 (31%), Positives = 128/225 (56%), Gaps = 8/225 (3%)
Query: 1 MKVIEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSV 60
M I ++N++KS+ FKA++N++L+V +G LGP+G GK+T + + G+ P G +
Sbjct: 1 MGEISVKNISKSWADFKALNNINLDVREGEFLSILGPSGCGKSTLLRIIAGLESPTDGDI 60
Query: 61 RLLGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLK 120
+ G + +P+ K ++GF+ +N ++ LT ++N+ PK E ++R+ + L+
Sbjct: 61 VIAGKQVTNDPVW-KRKIGFVFQNFALWPHLTVFKNVAMGLELRKTPKDELQQRVTKALR 119
Query: 121 LVGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILE- 179
+V L + R S G +QR+ LA+A++ P++L+LDEP S LD L +D+ +E
Sbjct: 120 MVQLEALADRLPSQLSGGQQQRVALARAIVLKPDVLLLDEPLSALD---KNLRQDMQVEL 176
Query: 180 ---QKKQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEI 221
Q+ G T F +H E L+D+V ++ +G + + T + I
Sbjct: 177 KALQRTLGLTTVFVTHDQEEALSLSDRVVVMNRGVIEQLDTPDNI 221
>pir||E69162 sulfate transport system ATP-binding - Methanobacterium
thermoautotrophicum (strain Delta H)
>gi|2621547|gb|AAB84983.1| (AE000832) sulfate transport
system ATP-binding [Methanobacterium
thermoautotrophicum]
Length = 348
Score = 125 bits (310), Expect = 8e-28
Identities = 76/228 (33%), Positives = 128/228 (55%), Gaps = 15/228 (6%)
Query: 1 MKVIEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSV 60
M VIE+ +TKSYG K +++++L+V +G G +GP GAGK+T + M + PD G +
Sbjct: 2 MHVIELSGITKSYGDIKVLEDVNLKVREGETLGIIGPTGAGKSTLLRIMDLLERPDDGEI 61
Query: 61 RLLGYDIFK-EPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPK----QEKEKRI 115
+G ++ +P++ + R+G + +N ++ A S P+ + E +
Sbjct: 62 LFMGENVDDLKPLEVRRRMGMVFQNTPVFRGTVA-------ESILYGPRIRGERPHESEV 114
Query: 116 EELLKLVGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKD 175
+++L+ +GL R+ S G +QRL LAQ LIN PE+++LDE TS LDP ++D
Sbjct: 115 KDVLETMGLKGYGSRRTTELSGGERQRLALAQVLINRPEVVLLDEATSSLDPISRSRMED 174
Query: 176 IILEQKKQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKK 223
+I E TV F++H L + ++LAD++ I+ + L+T E KK
Sbjct: 175 VIAE---LDVTVIFTTHDLLQGQKLADRIAILNRSILQTGEPREIFKK 219
>pir||H71241 probable multiple sugar-binding transport ATP-binding protein -
Pyrococcus horikoshii >gi|3256580|dbj|BAA29263.1|
(AP000001) 375aa long hypothetical multiple
sugar-binding transport ATP-binding protein [Pyrococcus
horikoshii]
Length = 375
Score = 125 bits (310), Expect = 8e-28
Identities = 70/228 (30%), Positives = 131/228 (56%), Gaps = 8/228 (3%)
Query: 1 MKVIEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSV 60
M +++ N+ K +G AV +LSLE++ G LGP+G GKTTT+ + G+ P G +
Sbjct: 4 MAEVKLINIWKRFGDVTAVKDLSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTRGQI 63
Query: 61 RLLGYDIFKEPIKA-----KER-LGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKR 114
+ ++ +P K KER + + ++ +Y +T + N+ F +PKQE +KR
Sbjct: 64 YIED-NLVADPEKGVFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEIDKR 122
Query: 115 IEELLKLVGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQ-GARLV 173
+ E+ +++GL ++ RK + S G +QR+ L +A+I P++ ++DEP S LD + ++
Sbjct: 123 VREVAEMLGLTELLNRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMR 182
Query: 174 KDIILEQKKQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEI 221
++ Q++ G T + +H E + D++ ++ KG+L+ VGT +E+
Sbjct: 183 AELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNKGELQQVGTPDEV 230
>pir||G71486 probable ABC transporter ATPase - Chlamydia trachomatis (serotype
D, strain UW3/Cx) >gi|3329103|gb|AAC68248.1| (AE001336)
ABC Transporter ATPase [Chlamydia trachomatis]
Length = 239
Score = 125 bits (310), Expect = 8e-28
Identities = 76/233 (32%), Positives = 123/233 (52%), Gaps = 2/233 (0%)
Query: 1 MKVIEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSV 60
M V+ + NL K Y K +++S +V G I G LGPNGAGKTT +G+I PDSG +
Sbjct: 1 MSVLSVCNLIKKYNKKPVTNDVSFQVNAGEIVGLLGPNGAGKTTAFYQTVGLIRPDSGKI 60
Query: 61 RLLGYDIFKEPIKAKERL--GFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEEL 118
DI K+P+ + RL G+L + TI++ELT NL ++E+ + L
Sbjct: 61 LFKNTDITKKPMDYRARLGIGYLAQEPTIFKELTVKENLICVLEIIYKTRKEQTHLLNAL 120
Query: 119 LKLVGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIIL 178
+ + L ++K S S G ++RL +A L +P +L+LDEP + +DP + VK +I
Sbjct: 121 IDDLQLTTSLHKKAGSLSGGERRRLEIACVLALNPSVLLLDEPFANVDPLVIQNVKYLIK 180
Query: 179 EQKKQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGY 231
+G + + H E+ +AD+ +I+ GK+ G+ ++ M + Y
Sbjct: 181 ILASRGIGILITDHNAKELLSIADRCYLIIDGKIFFEGSSAQMIANPMVRQHY 233
>gb|AAB17558.1| (U72493) ATP binding protein [Chlamydia trachomatis]
Length = 257
Score = 124 bits (309), Expect = 1e-27
Identities = 73/214 (34%), Positives = 116/214 (54%), Gaps = 2/214 (0%)
Query: 1 MKVIEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSV 60
M V+ + NL K Y K +++S +V G I G LGPNGAGKTT +G+I PDSG +
Sbjct: 1 MSVLSVCNLIKKYNKKPVTNDVSFQVNAGEIVGLLGPNGAGKTTAFYQTVGLIRPDSGKI 60
Query: 61 RLLGYDIFKEPIKAKERL--GFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEEL 118
DI K+P+ + RL G+L + TI++ELT NL ++E+ + L
Sbjct: 61 LFKNTDITKKPMDYRARLGIGYLAQEPTIFKELTVKENLICVLEIIYKTRKEQTHLLNAL 120
Query: 119 LKLVGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIIL 178
+ + L ++K S S G ++RL +A L +P +L+LDEP + +DP + VK +I
Sbjct: 121 IDDLQLTTSLHKKAGSLSGGERRRLEIACVLALNPSVLLLDEPFANVDPLVIQNVKYLIK 180
Query: 179 EQKKQGKTVFFSSHILSEVEELADKVGIIVKGKL 212
+G + + H E+ +AD+ +I+ GK+
Sbjct: 181 ILASRGIGILITDHNAKELLSIADRCYLIIDGKI 214
>gb|AAF73520.1| (AE002271) ABC transporter, ATP-binding protein [Chlamydia
muridarum]
Length = 239
Score = 124 bits (309), Expect = 1e-27
Identities = 76/233 (32%), Positives = 123/233 (52%), Gaps = 2/233 (0%)
Query: 1 MKVIEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSV 60
M V+ + NL K Y K +++S +V G I G LGPNGAGKTT +G+I PDSG +
Sbjct: 1 MSVLSVCNLIKRYNKKPVTNDVSFQVNAGEIVGLLGPNGAGKTTAFYQTVGLIRPDSGKI 60
Query: 61 RLLGYDIFKEPIKAKERL--GFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEEL 118
DI K+P+ + RL G+L + TI++ELT NL ++E+ + L
Sbjct: 61 LFKNTDITKKPMDYRARLGIGYLAQEPTIFKELTVKENLICVLEIIYKTRKEQTHLLNAL 120
Query: 119 LKLVGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIIL 178
+ + L ++K S S G ++RL +A L +P +L+LDEP + +DP + VK +I
Sbjct: 121 IDDLQLTTSLHKKAGSLSGGERRRLEIACVLALNPSVLLLDEPFANVDPLVIQNVKYLIK 180
Query: 179 EQKKQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGY 231
+G + + H E+ +AD+ +I+ GK+ G+ ++ M + Y
Sbjct: 181 ILASRGIGILITDHNAKELLSIADRCYLIIDGKIFFEGSSAQMIANPMVRQHY 233
>pir||B75207 multiple sugar-binding transport ATP-binding protein msmk PAB0123 -
Pyrococcus abyssi (strain Orsay)
>gi|5457614|emb|CAB49105.1| (AJ248283) MULTIPLE
SUGAR-BINDING TRANSPORT ATP-BINDING PROTEIN MSMK
[Pyrococcus abyssi]
Length = 371
Score = 124 bits (308), Expect = 1e-27
Identities = 69/228 (30%), Positives = 130/228 (56%), Gaps = 8/228 (3%)
Query: 1 MKVIEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSV 60
M +++ N+ K +G F AV LSLE++ G LGP+G GKTTT+ + G+ P G +
Sbjct: 1 MAEVKLINVWKKFGDFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQI 60
Query: 61 RLLGYDIFKEPIKA-----KER-LGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKR 114
+ + +P K KER + + ++ +Y +T + N+ F +PKQE ++R
Sbjct: 61 -YIDDKLVADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEIDRR 119
Query: 115 IEELLKLVGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQ-GARLV 173
+ E+ +++GL ++ RK + S G +QR+ L +A+I P++ ++DEP S LD + ++
Sbjct: 120 VREVAEMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMR 179
Query: 174 KDIILEQKKQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEI 221
++ Q++ G T + +H E + D++ ++ +G+L+ VGT +E+
Sbjct: 180 AELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEV 227
>pir||C65111 probable ABC transporter (ntrA/rpoN 5'region) - Escherichia coli
(strain K-12) >gi|606140|gb|AAA58003.1| (U18997)
ORF_o241 [Escherichia coli] >gi|1789593|gb|AAC76233.1|
(AE000399) putative ATP-binding component of a transport
system [Escherichia coli K12]
Length = 241
Score = 123 bits (307), Expect = 2e-27
Identities = 74/224 (33%), Positives = 127/224 (56%), Gaps = 3/224 (1%)
Query: 1 MKVIEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSV 60
M + +NL K+Y + V+++SL V G I G LGPNGAGKTTT ++GI+ D+G++
Sbjct: 1 MATLTAKNLAKAYKGRRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNI 60
Query: 61 RLLGYDIFKEPIKAKER--LGFLPENATIYEELTAWRNLDFFASFY-NIPKQEKEKRIEE 117
+ DI P+ A+ R +G+LP+ A+I+ L+ + NL ++ +++E R E
Sbjct: 61 IIDDDDISLLPLHARARRGIGYLPQEASIFRRLSVYDNLMAVLQIRDDLSAEQREDRANE 120
Query: 118 LLKLVGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDII 177
L++ + +R +S S G ++R+ +A+AL +P+ ++LDEP +G+DP +K II
Sbjct: 121 LMEEFHIEHLRDSMGQSLSGGERRRVEIARALAANPKFILLDEPFAGVDPISVIDIKRII 180
Query: 178 LEQKKQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEI 221
+ G V + H + E + ++ I+ +G L GT EI
Sbjct: 181 EHLRDSGLGVLITDHNVRETLAVCERAYIVSQGHLIAHGTPTEI 224
>emb|CAC11868.1| (AL445065) ATP-binding protein related resistance protein
[Thermoplasma acidophilum]
Length = 319
Score = 123 bits (307), Expect = 2e-27
Identities = 79/309 (25%), Positives = 155/309 (49%), Gaps = 15/309 (4%)
Query: 3 VIEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSVRL 62
++E+ NL+K Y V N S+++ G I LG NGAGK+TT+ + G++ PDS +
Sbjct: 6 LLEVRNLSKIYPGGSGVRNASIKIRYGSIHALLGNNGAGKSTTMKCITGLLEPDSIEISF 65
Query: 63 LGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLKLV 122
G K+ +G++PE + T + + + K E R ++ ++
Sbjct: 66 RGTTYPWNSKDLKKHIGYVPELPAFPKVFTVHDCIVSYGRMMGLGKAEAVGRAMPIVSIL 125
Query: 123 GLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQKK 182
GL + ++V S S+GM Q+L + AL++DP+++I+DEPT+GLD + II +
Sbjct: 126 GLEEHMKKRVSSLSRGMLQKLDIVIALLSDPDVIIMDEPTAGLDVSAVEELFGIIRSLRD 185
Query: 183 QGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLE---------EIKKQYMELEGYEI 233
+GK++ SSH L ++E ++D V ++ G + G+++ E+ ++ ++G +
Sbjct: 186 RGKSILISSHQLRDIETISDSVTVMDSGHVIFDGSIKDLYASAGSVEVVAEFSRIDGKLM 245
Query: 234 K-VETKQPFPEIELPDVIRIEKIADNKVLIFAKSDIREILSEELSKRGITVLSLEIEEPS 292
+ ++ Q ++ + DV IA +D L + + G++++S +
Sbjct: 246 ETIKRMQGVMDVRMEDVPNRISIA-----FSGSTDPCGYLRDLAFRDGVSLISCSRSQSD 300
Query: 293 LEDVFLKTI 301
L F++ +
Sbjct: 301 LRTAFIRMV 309
>pir||G64435 cobalt transport ATP-binding protein O homolog - Methanococcus
jannaschii >gi|1591732|gb|AAB99089.1| (U67551) cobalt
transport ATP-binding protein (cbiO) [Methanococcus
jannaschii]
Length = 279
Score = 123 bits (306), Expect = 2e-27
Identities = 77/227 (33%), Positives = 125/227 (54%), Gaps = 7/227 (3%)
Query: 1 MKVIEIENLTKSYGKFKAV-DNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGS 59
M ++E ++L Y AV ++ +V+KG + LGPNGAGK+T L GI+ P G
Sbjct: 1 MYIVETKDLYFRYPDGTAVLKGINFKVKKGEMVSLLGPNGAGKSTLFLHFNGILRPTKGE 60
Query: 60 VRLLGYDIF---KEPIKAKERLGFLPENAT--IYEELTAWRNLDFFASFYNIPKQEKEKR 114
V + G I K ++ ++ +G + +N I+ T ++ F +PK+E EKR
Sbjct: 61 VLIKGKPIKYDKKSLVEVRKTVGLVFQNPDDQIFAP-TVKEDVAFGPLNLGLPKEEVEKR 119
Query: 115 IEELLKLVGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVK 174
++E LK VG+ + S G K+R+ +A L PE+++LDEPT+GLDP GA +
Sbjct: 120 VKEALKAVGMEGFENKPPHHLSGGQKKRVAIAGILAMQPEVIVLDEPTAGLDPVGASKIM 179
Query: 175 DIILEQKKQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEI 221
++ + K+G T+ S+H + V ADKV ++ GK+ GT +E+
Sbjct: 180 KLLYDLNKKGMTIIISTHDVDLVPVYADKVYVMYDGKILKEGTPKEV 226
>pir||H71006 probable ATP-binding transport protein - Pyrococcus horikoshii
>gi|3257773|dbj|BAA30456.1| (AP000006) 330aa long
hypothetical ATP-binding transport protein [Pyrococcus
horikoshii]
Length = 330
Score = 122 bits (304), Expect = 4e-27
Identities = 73/217 (33%), Positives = 123/217 (56%), Gaps = 4/217 (1%)
Query: 1 MKVIEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSV 60
M IE+ ++ K +G+F+ +SL V+ G + LGP+G GKTTT+ + G+ PD G V
Sbjct: 1 MVSIELRDIIKRFGEFEL--KVSLSVKDGELLTLLGPSGCGKTTTLRIIAGLEKPDKGRV 58
Query: 61 RLLGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLK 120
G DI P + +G + ++ ++ +T ++N+ F +P+ E EKR+ E+L
Sbjct: 59 YFDGRDITDLP-PYERNIGLVFQDYALFPHMTVFKNVAFGLEVRRVPRMEIEKRVREVLD 117
Query: 121 LVGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQ-GARLVKDIILE 179
LVGL R + S G +QR+ LA+AL+ +P++L+LDEP S LD + +L +I
Sbjct: 118 LVGLRGFENRLPEELSGGQQQRVALARALVIEPDVLLLDEPLSNLDAKVREKLRGEIKRI 177
Query: 180 QKKQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVG 216
K+ G T + +H E L+D++ ++ G++ VG
Sbjct: 178 VKELGITTIYVTHDQEEAMVLSDRIAVMNFGRIEQVG 214
>emb|CAC00243.1| (AL160371) possible ABC transporter [Leishmania major]
Length = 1231
Score = 122 bits (303), Expect = 5e-27
Identities = 84/316 (26%), Positives = 154/316 (48%), Gaps = 33/316 (10%)
Query: 15 KFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSVRLLGYDIFKEPIKA 74
+F AVDN+S + +G I LGPNGAGK+TTI + G++ DSG + G+ I + +A
Sbjct: 829 RFAAVDNVSWNMYRGEIAVLLGPNGAGKSTTINMITGMLAADSGDCFIEGHSITQNVAEA 888
Query: 75 KERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLKLVGLWDVRYRKVKS 134
+ +G+ P++ ++ +LT +L+F+ + E E + ++L+ V L +
Sbjct: 889 RHEIGYCPQHNILWPDLTCREHLEFYGKIKGLRGAELEDAVVDILRAVDLEEKVDAIPAQ 948
Query: 135 FSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQKKQGKTVFFSSHIL 194
S G K++L +A A + +++LDEPT+G+D AR +L Q T+ ++H +
Sbjct: 949 MSGGQKRKLSVAIAFVGRNRVVLLDEPTAGMD-AAARRHTWSLLRAMAQHHTIMLTTHSM 1007
Query: 195 SEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYEIKVETKQPFPEIELPDVIRIEK 254
E + L D + I+ +G L+ G+ + +QY + GY ++ + P P E D R K
Sbjct: 1008 DEADLLGDNIAIVTEGVLQCAGSTAFL-RQYAGV-GYTLRFDL-TPVPTQEDGDAARQAK 1064
Query: 255 IA---------------DNKVLIFAKSDIREIL--------------SEELSKRGITVLS 285
+A D+ +++ +++ L E R + +
Sbjct: 1065 VAAVWAELHQLVMSHLPDSMLVLQTDAEVEYELRLGTDARLPEFLKDMESRGNRQLRIRG 1124
Query: 286 LEIEEPSLEDVFLKTI 301
+ P+LEDVF++ +
Sbjct: 1125 YALRAPTLEDVFMRVV 1140
>pir||G71014 probable dipeptide transport ATP-binding protein dppF - Pyrococcus
horikoshii >gi|3257836|dbj|BAA30519.1| (AP000006) 329aa
long hypothetical dipeptide transport ATP-binding
protein dppF [Pyrococcus horikoshii]
Length = 329
Score = 122 bits (302), Expect = 7e-27
Identities = 85/267 (31%), Positives = 140/267 (51%), Gaps = 13/267 (4%)
Query: 2 KVIEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSVR 61
K + L ++ G KAVD +S E+ KG FG +G +G GKTTT ++L +I P G +
Sbjct: 16 KYFPVRGLLRTVGWVKAVDGVSFEIYKGETFGLVGESGCGKTTTGRTILRLIEPTDGRII 75
Query: 62 LLGYDIFK------EPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRI 115
+G D+ K + + K ++ F +++ T ++ + F+ I + E+ +
Sbjct: 76 FMGKDVTKLKGNELKWFRRKAQIMFQDPYSSLDPRQTVFQIIMEPVRFHGIQVDDPEEFV 135
Query: 116 EELLKLVGLWDVR-YRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVK 174
+LL+ VGL ++ YR FS G +QR+ LA+ L PE ++LDEPTS LD +
Sbjct: 136 IKLLESVGLNEMHLYRYPHEFSGGQRQRIALARLLALKPEFIVLDEPTSALDVSVQANIL 195
Query: 175 DIILE-QKKQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYEI 233
+ + E Q+K G T F SH L V+ ++D++G++ GKL VG +++ + L Y
Sbjct: 196 NTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVGPADKVFEN--PLHPYTQ 253
Query: 234 KVETKQPFPEIELPDVIRIEKIADNKV 260
+ + P P+ PD+ R K KV
Sbjct: 254 MLFSAIPIPD---PDIAREMKKKRMKV 277
>pir||G75117 dipeptide abc transporter, ATP-binding protein (dppf) PAB1875 -
Pyrococcus abyssi (strain Orsay)
>gi|5458167|emb|CAB49656.1| (AJ248285) dipeptide ABC
transporter, ATP-binding protein (dppF) [Pyrococcus
abyssi]
Length = 326
Score = 122 bits (302), Expect = 7e-27
Identities = 88/267 (32%), Positives = 140/267 (51%), Gaps = 13/267 (4%)
Query: 2 KVIEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSVR 61
K I L ++ G KAVD +S E+++G FG +G +G GKTTT ++L +I P G +
Sbjct: 13 KYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTILRLIEPTDGKII 72
Query: 62 LLGYDIFK---EPIK---AKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRI 115
+G D+ K E +K K ++ F +++ T ++ + F+ I + E+ +
Sbjct: 73 FMGKDVTKLKGEELKWFRRKAQIMFQDPYSSLDPRQTVFQIIMEPVKFHGIQVDDPEEFV 132
Query: 116 EELLKLVGLWDVR-YRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVK 174
LL+ VGL ++ YR FS G +QR+ LA+ L PE ++LDEPTS LD +
Sbjct: 133 IRLLESVGLNEMHLYRYPHEFSGGQRQRIALARLLALKPEFIVLDEPTSALDVSVQANIL 192
Query: 175 DIILE-QKKQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYEI 233
+ + E Q+K G T F SH L V+ ++D++G++ GKL VG + I + L Y
Sbjct: 193 NTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVGPADRIFEN--PLHPYTQ 250
Query: 234 KVETKQPFPEIELPDVIRIEKIADNKV 260
+ + P P+ PD+ R K KV
Sbjct: 251 MLFSAIPIPD---PDLAREMKKKRMKV 274
>sp|P31220|YHBG_ECOLI PROBABLE ABC TRANSPORTER ATP-BINDING PROTEIN IN MURA-RPON
INTERGENIC REGION (ORF1) (ORF241)
>gi|2126052|pir||I60351 rpoN protein - Escherichia coli
>gi|285780|dbj|BAA02314.1| (D12938) ORF1 [Escherichia
coli] >gi|551337|gb|AAB60162.1| (U12684) orf241
[Escherichia coli]
Length = 241
Score = 120 bits (298), Expect = 2e-26
Identities = 73/224 (32%), Positives = 125/224 (55%), Gaps = 3/224 (1%)
Query: 1 MKVIEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSV 60
M + +NL K+Y + V+++SL V G I G LGPNGAGKTTT ++GI+ G++
Sbjct: 1 MATLTAKNLAKAYKGRRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPARCGNI 60
Query: 61 RLLGYDIFKEPIKAKER--LGFLPENATIYEELTAWRNLDFFASFY-NIPKQEKEKRIEE 117
+ DI P+ A+ R +G+LP+ A+I+ L+ + NL ++ +++E R E
Sbjct: 61 IIDDDDISLLPLHARARRGIGYLPQEASIFRRLSVYDNLMAVLQIRDDLSAEQREDRANE 120
Query: 118 LLKLVGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDII 177
L++ + +R +S S G ++R+ +A+AL +P+ ++LDEP +G+DP +K II
Sbjct: 121 LMEEFHIEHLRDSMGQSLSGGERRRVEIARALAANPKFILLDEPFAGVDPISVIDIKRII 180
Query: 178 LEQKKQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEI 221
+ G V + H + E + ++ I+ +G L GT EI
Sbjct: 181 EHLRDSGLGVLITDHNVRETLAVCERAYIVSQGHLIAHGTPTEI 224
>pir||F72756 probable multiple sugar-binding transport ATP-binding protein
APE0043 - Aeropyrum pernix (strain K1)
>gi|5103431|dbj|BAA78952.1| (AP000058) 381aa long
hypothetical multiple sugar-binding transport
ATP-binding protein [Aeropyrum pernix]
Length = 381
Score = 120 bits (298), Expect = 2e-26
Identities = 77/231 (33%), Positives = 129/231 (55%), Gaps = 16/231 (6%)
Query: 1 MKVIEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSV 60
M I +E + K +GK AVD++ L ++ G F LGP+G GKTTT+ + G+ PD G +
Sbjct: 14 MAEIRLEGVVKRFGKVVAVDHVDLSIKDGEFFVLLGPSGCGKTTTLRLIAGLEYPDEGRI 73
Query: 61 RLLGYDI-FKEPIKAKER-LGFLPENATIYEELTAWRNLDFFASF----YNIPKQEKEKR 114
+ G D+ FK+P K+R + + +N +Y ++ + N+ F + K + +R
Sbjct: 74 LIDGEDVTFKDP---KDRNVAMVFQNYALYPHMSVFDNIAFTLHLRRKEMGLTKDDIRRR 130
Query: 115 IEELLKLVGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVK 174
+ E+ KL+ + D+ RK S G +QR+ LA+AL+ P++ ++DEP S LD A L
Sbjct: 131 VIEVAKLLRIEDLLDRKPGQLSGGQQQRVALARALVRRPKVWLMDEPLSNLD---ALLRL 187
Query: 175 DIILEQKKQGK----TVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEI 221
+ E KK K T + +H +E +AD++ ++ KG++ VGT EE+
Sbjct: 188 AMRAELKKLQKDLKITTVYVTHDQAEAMSMADRIAVMNKGRVVQVGTPEEV 238
>gi|10955070 agtA [Agrobacterium tumefaciens]
>gi|6689864|gb|AAF23877.1|AF117204_2 (AF242881) agtA
[Agrobacterium tumefaciens]
Length = 359
Score = 119 bits (296), Expect = 4e-26
Identities = 71/226 (31%), Positives = 122/226 (53%), Gaps = 10/226 (4%)
Query: 1 MKVIEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSV 60
+ + + +T+ +G AVDN+SL++ +G F LG +G+GKTT + + G P+ G V
Sbjct: 6 LPAVSFQGVTRRFGPVTAVDNVSLDISQGEFFALLGSSGSGKTTLLTLLAGFDNPNEGQV 65
Query: 61 RLLGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLK 120
+ G + P K ++G + +N ++ LTA N+ + + + E+E+R++ L
Sbjct: 66 LMSGVSVSDVP-PHKRQIGVVFQNYALFPHLTAAENVAYPLRMRGVARHEREERVKAALA 124
Query: 121 LVGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQ 180
LV L D S G +QR+ LA+AL+ P +L++DEP LD R ++D + ++
Sbjct: 125 LVNLSDRLGAYPIQLSGGQQQRVALARALVFSPAILLMDEPLGALD----RRLRDQMQQE 180
Query: 181 KKQ-----GKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEI 221
K+ G TV + +H SE +AD++GI+ G+L V E I
Sbjct: 181 LKRIQHELGITVIYVTHDQSEAMAMADRIGIMSAGRLLQVADPEAI 226
>gb|AAD24578.1|AF126010_1 (AF126010) trehalose/maltose transport ATP-hydrolyzing subunit MalK
[Thermococcus litoralis]
Length = 372
Score = 119 bits (295), Expect = 5e-26
Identities = 67/228 (29%), Positives = 129/228 (56%), Gaps = 8/228 (3%)
Query: 1 MKVIEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSV 60
M + + ++ K +G+ AV LSLEV+ G LGP+G GKTTT+ + G+ P G +
Sbjct: 1 MAGVRLVDVWKVFGEVTAVRELSLEVKDGEFMILLGPSGCGKTTTLRMIAGLEEPSRGQI 60
Query: 61 RLLGYDIFKEPIKA-----KER-LGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKR 114
+G + +P K K+R + + ++ +Y +T + N+ F +P+QE ++R
Sbjct: 61 -YIGDRLVADPEKGIFVPPKDRDIAMVFQSYALYPHMTVYDNIAFPLKLRKVPRQEIDQR 119
Query: 115 IEELLKLVGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQ-GARLV 173
+ E+ +L+GL ++ RK + S G +QR+ L +A++ P++ ++DEP S LD + R+
Sbjct: 120 VREVAELLGLTELLNRKPRELSGGQRQRVALGRAIVRKPQVFLMDEPLSNLDAKLRVRMR 179
Query: 174 KDIILEQKKQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEI 221
++ Q++ G T + +H E + D++ ++ +G L+ VG+ +E+
Sbjct: 180 AELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGVLQQVGSPDEV 227
>gb|AAD23570.1|AF121946_1 (AF121946) maltose transport protein MalK [Thermococcus litoralis]
Length = 372
Score = 118 bits (294), Expect = 6e-26
Identities = 66/228 (28%), Positives = 129/228 (55%), Gaps = 8/228 (3%)
Query: 1 MKVIEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSV 60
M + + ++ K +G+ AV +SLEV+ G LGP+G GKTTT+ + G+ P G +
Sbjct: 1 MAGVRLVDVWKVFGEVTAVREMSLEVKDGEFMILLGPSGCGKTTTLRMIAGLEEPSRGQI 60
Query: 61 RLLGYDIFKEPIKA-----KER-LGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKR 114
+G + +P K K+R + + ++ +Y +T + N+ F +P+QE ++R
Sbjct: 61 -YIGDKLVADPEKGIFVPPKDRDIAMVFQSYALYPHMTVYDNIAFPLKLRKVPRQEIDQR 119
Query: 115 IEELLKLVGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQ-GARLV 173
+ E+ +L+GL ++ RK + S G +QR+ L +A++ P++ ++DEP S LD + R+
Sbjct: 120 VREVAELLGLTELLNRKPRELSGGQRQRVALGRAIVRKPQVFLMDEPLSNLDAKLRVRMR 179
Query: 174 KDIILEQKKQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEI 221
++ Q++ G T + +H E + D++ ++ +G L+ VG+ +E+
Sbjct: 180 AELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGVLQQVGSPDEV 227
>pir||C72044 ABC transporter ATPase - Chlamydophila pneumoniae (strain CWL029)
>gi|4377027|gb|AAD18862.1| (AE001653) ABC Transporter
ATPase [Chlamydophila pneumoniae CWL029]
>gi|8163348|gb|AAF73617.1| (AE002166) ABC transporter,
ATP-binding protein [Chlamydophila pneumoniae AR39]
>gi|8979095|dbj|BAA98930.1| (AP002547) ABC transporter
ATPase [Chlamydophila pneumoniae J138]
Length = 240
Score = 118 bits (293), Expect = 8e-26
Identities = 70/233 (30%), Positives = 122/233 (52%), Gaps = 2/233 (0%)
Query: 1 MKVIEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSV 60
M ++ + NL K Y K +++S ++ G I G LGPNGAGKTT +G+I PDSG +
Sbjct: 1 MPILSVCNLVKKYNKKPVTNDVSFQINPGEIVGLLGPNGAGKTTAFYLTVGLIRPDSGKI 60
Query: 61 RLLGYDIFKEPIKAKERL--GFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEEL 118
D+ K+ + + RL G+L + TI++ELT NL ++++ + L
Sbjct: 61 IFKNVDVTKKTMDHRARLGIGYLAQEPTIFKELTVQDNLICILEIIYKARKQQSHLLNTL 120
Query: 119 LKLVGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIIL 178
+ + L ++K + S G ++RL +A L +P +L+LDEP + +DP + VK +I
Sbjct: 121 VDDLQLGSCLHKKAGTLSGGERRRLEIACVLALNPSVLLLDEPFANVDPLVIQNVKYLIK 180
Query: 179 EQKKQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGY 231
+G + + H E+ +AD+ +I+ GK+ G+ ++ M + Y
Sbjct: 181 ILAGRGIGILITDHNAKELLSIADRCYLIIDGKIFFEGSSSQMISNPMVKQHY 233
>pir||F71654 ABC transporter ATP-binding protein (abcT2) RP508 - Rickettsia
prowazekii >gi|3861060|emb|CAA14960.1| (AJ235272) ABC
TRANSPORTER ATP-BINDING PROTEIN (abcT2) [Rickettsia
prowazekii]
Length = 254
Score = 118 bits (292), Expect = 1e-25
Identities = 67/233 (28%), Positives = 126/233 (53%), Gaps = 2/233 (0%)
Query: 1 MKVIEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSV 60
M ++I+N++KSY K + ++SL +++G I G GPNGAGKTT ++G++ PDSG +
Sbjct: 15 MDSLQIKNISKSYKKRNILTDISLHIKQGEIVGLFGPNGAGKTTCFNIIIGLMRPDSGQL 74
Query: 61 RLLGYDIFKEPIKAKERL--GFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEEL 118
L +I PI + RL G+L + +I+ L+ N+ K+ E++ L
Sbjct: 75 LLNDINITNLPIYLRARLGIGYLLQEPSIFRGLSVADNIKAVVEISENDKEVIEQKTHNL 134
Query: 119 LKLVGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIIL 178
L+ + ++ S S G ++RL +A++ + +P+ ++LDEP +G+DP +K +I
Sbjct: 135 LEKFSIVHLKDLSSASLSGGERRRLEIARSFVIEPKFIMLDEPLAGIDPLAISDIKKLIT 194
Query: 179 EQKKQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGY 231
++ + + H + + ++ D+ +I +GK+ G+ +EI E Y
Sbjct: 195 YLREFNIGILITDHNVRDTLDIVDRAYVIFEGKVLLEGSAQEIANSKKVKEVY 247
>emb|CAA11111.1| (AJ223088) hypothetical protein [Pseudomonas stutzeri]
Length = 241
Score = 117 bits (290), Expect = 2e-25
Identities = 71/234 (30%), Positives = 127/234 (53%), Gaps = 3/234 (1%)
Query: 1 MKVIEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSV 60
M V++ ++L KSY + V ++SL +E G I G LGPNGAGKTT + G++ D G V
Sbjct: 1 MAVLKAQHLAKSYKSRQVVRDVSLSIESGQIVGLLGPNGAGKTTCFYMIAGLVNADQGRV 60
Query: 61 RLLGYDIFKEPI--KAKERLGFLPENATIYEELTAWRN-LDFFASFYNIPKQEKEKRIEE 117
+ D+ P+ +A+ +G+LP+ A+I+ +L+ N + + ++ + +++ +E
Sbjct: 61 LIDQNDVTHLPMHGRARAGIGYLPQEASIFRKLSVADNIMAILETRKDLDRSGRQQALEG 120
Query: 118 LLKLVGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDII 177
LL+ + +R S S G ++R+ +A+AL P+ ++LDEP +G+DP +K II
Sbjct: 121 LLQEFHINHIRNSLGMSLSGGERRRVEIARALATAPKFILLDEPFAGVDPISVGDIKQII 180
Query: 178 LEQKKQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGY 231
K +G V + H + E ++ + I+ G+L G + I + E Y
Sbjct: 181 HHLKAKGIGVLITDHNVRETLDICETAYIVNDGQLIAEGDAQTILSNQLVKEVY 234
>pir||H72555 probable transporter ATP-binding protein APE1732 - Aeropyrum pernix
(strain K1) >gi|5105420|dbj|BAA80733.1| (AP000062) 358aa
long hypothetical transporter ATP-binding protein
[Aeropyrum pernix]
Length = 358
Score = 116 bits (287), Expect = 4e-25
Identities = 65/223 (29%), Positives = 123/223 (55%), Gaps = 4/223 (1%)
Query: 1 MKVIEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSV 60
M I +E++TK +G A+D +SL + G IF LGP+G GKTTT+ + G PD G V
Sbjct: 1 MAGIRLESVTKRFGNTVALDRVSLNISDGEIFTLLGPSGCGKTTTLRVIAGFETPDEGRV 60
Query: 61 RLLGYDI-FKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELL 119
+ D+ +P + + F +N ++ + + N+ + +P+ E +R+
Sbjct: 61 YIGSRDVTMLKPYERNTAMVF--QNYALWPHMRVFDNIAYGLKLRKLPRSEIVRRVRWAA 118
Query: 120 KLVGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQ-GARLVKDIIL 178
+L+ + + R S G +QR+ +A+A++ +PE+L++DEP S LD ++ ++I+
Sbjct: 119 ELLEIDHLLDRYPHQLSGGQQQRVAVARAIVTEPEVLLMDEPLSNLDAHLRLKMREEIVR 178
Query: 179 EQKKQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEI 221
QK+ G T+ + +H E ++ +V ++ +G++ VGT E+
Sbjct: 179 LQKRLGVTIVYVTHDQEEALSISHRVAVMNRGRVEQVGTPMEV 221
>sp|Q57855|Y412_METJA HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PROTEIN MJ0412
>gi|2129162|pir||D64351 nitrate transport ATP-binding
protein - Methanococcus jannaschii
>gi|1591118|gb|AAB98401.1| (U67493) nitrate transporter
protein (nrtC) homolog (cmpC) [Methanococcus jannaschii]
Length = 267
Score = 115 bits (285), Expect = 7e-25
Identities = 77/233 (33%), Positives = 131/233 (56%), Gaps = 14/233 (6%)
Query: 1 MKV-IEIENLTKSY----GKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIP 55
MKV +++ENLTK + + KA+DN++LEV + +GP+G GKTT + + G+ P
Sbjct: 13 MKVKLKVENLTKIFEFNGNRVKALDNINLEVYENEFLTVMGPSGCGKTTLLRIIAGLDYP 72
Query: 56 DSGSVRLLGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRI 115
G V L G ++ K P + G + + T+ T +N+ F IPK E+ +
Sbjct: 73 TEGKVLLDGKEV-KGPGADR---GVVFQQYTLMPWRTVLKNVTFGLELKGIPKNERIEIA 128
Query: 116 EELLKLVGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKD 175
++ +K+VGL S GM+QR+ +A+ L NDPE++++DEP + LD Q ++++
Sbjct: 129 KKFIKMVGLEGFEDAYPYQLSGGMQQRVAIARTLANDPEIVLMDEPFAALDAQTRNILQN 188
Query: 176 IILE-QKKQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYME 227
+L+ +K+ KTVFF +H + E L+D+V ++ G ++EI K +E
Sbjct: 189 ELLKIWQKEKKTVFFVTHSVDEAVYLSDRVVVLT----ARPGRIKEIVKIDLE 237
>pir||E83087 probable ATP-binding component of ABC transporter PA4461 [imported]
- Pseudomonas aeruginosa (strain PAO1)
>gi|9950697|gb|AAG07849.1|AE004860_5 (AE004860) probable
ATP-binding component of ABC transporter [Pseudomonas
aeruginosa]
Length = 241
Score = 115 bits (285), Expect = 7e-25
Identities = 68/234 (29%), Positives = 129/234 (55%), Gaps = 3/234 (1%)
Query: 1 MKVIEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSV 60
M ++ ++L KSY + V ++S+ ++ G I G LGPNGAGKTT ++G++ D G V
Sbjct: 1 MATLKAQHLAKSYKGRQVVRDVSMSIDSGQIVGLLGPNGAGKTTCFYMIVGLVQADQGVV 60
Query: 61 RLLGYDIFKEPI--KAKERLGFLPENATIYEELTAWRN-LDFFASFYNIPKQEKEKRIEE 117
R+ ++ P+ +A+ +G+LP+ A+I+ +L+ N + + ++ + +++ +E
Sbjct: 61 RIDEQNVTHLPMHGRARAGIGYLPQEASIFRKLSVSDNIMAILETRSDLDRNGRKEALEG 120
Query: 118 LLKLVGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDII 177
LL+ + +R S S G ++R+ +A+AL + P+ ++LDEP +G+DP +K II
Sbjct: 121 LLQEFHIHHIRDNLGMSLSGGERRRVEIARALASAPKFILLDEPFAGVDPISVGDIKQII 180
Query: 178 LEQKKQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGY 231
K +G + + H + E ++ + I+ G+L G E I + E Y
Sbjct: 181 HHLKAKGIGILITDHNVRETLDICETAYIVNDGQLIAEGDAESILANDLVKEVY 234
>pir||H75151 abc transporter, ATP-binding protein PAB0249 - Pyrococcus abyssi
(strain Orsay) >gi|5457805|emb|CAB49295.1| (AJ248284)
ABC transporter, ATP-binding protein [Pyrococcus abyssi]
Length = 280
Score = 115 bits (284), Expect = 9e-25
Identities = 80/250 (32%), Positives = 133/250 (53%), Gaps = 14/250 (5%)
Query: 1 MKVIEIENLTKSYGKFKAVD--NLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSG 58
M +IE+EN++ YG KA +++L V+KG G +GP+G+GK+T L++ G+I P S
Sbjct: 1 MNIIEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLI-PHSI 59
Query: 59 SVRLLGYDIFKEPIKAKE--------RLGFLPENA-TIYEELTAWRNLDFFASFYNIPKQ 109
+ G ++F + + +E R+G + +N + +T + F + ++
Sbjct: 60 NGEFEG-NVFVDGLNTREHSVAELSTRVGLVFQNPDSQLFNMTVLEEVAFALENLGVERE 118
Query: 110 EKEKRIEELLKLVGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQG 169
E +RI LKLV LWD R + S G KQRL +A L+ P++L+LDEPTS LDP G
Sbjct: 119 EMWRRIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLG 178
Query: 170 ARLVKDII-LEQKKQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMEL 228
V ++ L K++ T+ H + E AD++ + G++ G EE+ + L
Sbjct: 179 REEVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEVFENVEFL 238
Query: 229 EGYEIKVETK 238
E I++ T+
Sbjct: 239 ERIGIRIPTR 248
>emb|CAC11826.1| (AL445065) probable sugar ABC transporter, ATP-binding protein
[Thermoplasma acidophilum]
Length = 372
Score = 115 bits (284), Expect = 9e-25
Identities = 67/225 (29%), Positives = 126/225 (55%), Gaps = 9/225 (4%)
Query: 1 MKVIEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSV 60
M VI IENLT YG + N +L VE G F LG +G+GKTT + S+ G+I D G +
Sbjct: 1 MSVI-IENLTARYGDKYILKNFNLRVEDGEFFVILGSSGSGKTTLLRSIAGLIPIDDGRI 59
Query: 61 RLLGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLK 120
+ G D+ + + + + +N +Y +T + N+ ++PK E +K++ ++ +
Sbjct: 60 LIDGNDV-TDLYPSDRNIAMVFQNFALYPHMTVYDNISLNLKIKHVPKDEIKKKVSDVAE 118
Query: 121 LVGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILE- 179
++ + + + S G +QR+ +A+A++ DP + ++DEP S LD A+L ++++ E
Sbjct: 119 MLHISQHLQKYPRQLSGGEQQRVGIARAMVRDPSVFLMDEPLSNLD---AKLRREMLGEL 175
Query: 180 ---QKKQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEI 221
+K KT+ + H E LAD++ ++ +G++ +GT +E+
Sbjct: 176 RSFHEKVKKTIIYVCHDQDEAMALADRILVLNQGQIMQLGTPDEL 220
>gb|AAK41416.1| Sugar ABC transporter [Sulfolobus solfataricus]
Length = 368
Score = 114 bits (283), Expect = 1e-24
Identities = 70/229 (30%), Positives = 126/229 (54%), Gaps = 6/229 (2%)
Query: 1 MKVIEIENLTKSYG----KFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPD 56
M +++EN+ K Y K + + L+LE+EKG LGP+G GKTT + + G++ D
Sbjct: 2 MSYVKLENIWKEYEEKKRKVQVLRGLNLEIEKGEFVVILGPSGEGKTTILKIIAGLLRQD 61
Query: 57 SGSVRLLGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIE 116
G V L G + P K + R+ +P+N IY ++ + N+ F ++ K E +KR+
Sbjct: 62 KGHVYLRGEVVDDLPPKDR-RVAMVPQNYAIYPFMSVYDNIAFPLKVMHLSKDEIKKRVL 120
Query: 117 ELLKLVGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDI 176
E+ +++ + ++ RK S G QR+ +A+AL+ +++++DEP S LD Q + ++
Sbjct: 121 EVARMLRIDNLLERKPSQLSGGQMQRVAIARALVKGADIILMDEPLSNLDAQVRVVAREE 180
Query: 177 ILEQKKQGK-TVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQ 224
+ + ++ K T+ + +H E LA KV I+ G ++ G EI K+
Sbjct: 181 LKQLQRDLKPTIIYVTHDQVEALSLATKVAILHDGVVQAYGDPMEIYKR 229
>gi|11499064 ABC transporter, ATP-binding protein [Archaeoglobus fulgidus]
>gi|7445944|pir||D69433 ABC transporter, ATP-binding
protein homolog - Archaeoglobus fulgidus
>gi|2649101|gb|AAB89781.1| (AE001001) ABC transporter,
ATP-binding protein [Archaeoglobus fulgidus]
Length = 226
Score = 114 bits (282), Expect = 2e-24
Identities = 77/223 (34%), Positives = 130/223 (57%), Gaps = 13/223 (5%)
Query: 1 MKVIEIENLTK----SYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIII-P 55
MKVIE+ ++ K +Y + A+D +S+EVE G +GP+G+GK+T +L+M+G + P
Sbjct: 1 MKVIELVDVYKIYRTAYYEVHALDGVSMEVEAGEFVAIMGPSGSGKST-LLNMIGCLDKP 59
Query: 56 DSGSVRLLGYDIF----KEPIKAK-ERLGFLPENATIYEELTAWRNLDFFASFYNIPKQE 110
G V + G +E K + + +GF+ + + LTA N++ F + + E
Sbjct: 60 TKGEVIINGVKTSGLSDRELTKLRRDSIGFIFQQYNLIPTLTALENVELPMIFRGVARAE 119
Query: 111 KEKRIEELLKLVGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGA 170
+E+R +ELLK+VG+ ++ R+ + S G +QR+ +A+AL N+P++L+ DEPT LD +
Sbjct: 120 RERRAKELLKVVGIEELADRRPREMSGGQQQRVAIARALANNPKILLCDEPTGNLDTKSG 179
Query: 171 RLVKDIILE-QKKQGKTVFFSSHILSEVEELADKVGIIVKGKL 212
R V I+ ++ G TV +H S + E AD+V I GK+
Sbjct: 180 RQVMGILKNLNEENGVTVVLVTHDPS-LSEYADRVIRIRDGKV 221
>pir||C71220 probable sugar-binding transport ATP-binding protein - Pyrococcus
horikoshii >gi|3256407|dbj|BAA29090.1| (AP000001) 373aa
long hypothetical sugar-binding transport ATP-binding
protein [Pyrococcus horikoshii]
Length = 373
Score = 113 bits (281), Expect = 2e-24
Identities = 63/222 (28%), Positives = 121/222 (54%), Gaps = 2/222 (0%)
Query: 1 MKVIEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSV 60
M +++ENLTK +G F AV+ L+L ++ G LGP+G GKTTT+ + G+ P G +
Sbjct: 10 MVEVKLENLTKRFGNFTAVNKLNLTIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTEGRI 69
Query: 61 RLLGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLK 120
D+ P K + + + ++ ++ +T + N+ F PK E +KR+ +
Sbjct: 70 YFGDRDVTYLPPKDR-NISMVFQSYAVWPHMTVYENIAFPLKIKKFPKDEIDKRVRWAAE 128
Query: 121 LVGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQ-GARLVKDIILE 179
L+ + ++ R S G +QR+ +A+A++ +P++L++DEP S LD + + +I
Sbjct: 129 LLQIEELLNRYPAQLSGGQRQRVAVARAIVVEPDVLLMDEPLSNLDAKLRVAMRAEIKKL 188
Query: 180 QKKQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEI 221
Q+K T + +H E + D++ ++ +G+L +G+ E+
Sbjct: 189 QQKLKVTTIYVTHDQVEAMTMGDRIAVMNRGQLLQIGSPTEV 230
>pir||G69192 ABC transporter (glutamine transport ATP-binding protein) -
Methanobacterium thermoautotrophicum (strain Delta H)
>gi|2621782|gb|AAB85201.1| (AE000849) ABC transporter
(glutamine transport ATP-binding protein)
[Methanobacterium thermoautotrophicum]
Length = 220
Score = 113 bits (280), Expect = 3e-24
Identities = 67/199 (33%), Positives = 121/199 (60%), Gaps = 10/199 (5%)
Query: 1 MKVIEIENLTKSY--GKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGII-IPDS 57
MK IE+ +L KS+ G+ +A++ ++LEV+ G +GP+G+GK+T +L+M+G + +PDS
Sbjct: 1 MKAIEVRDLRKSFDSGRIRALNGVNLEVDGGEFISIMGPSGSGKST-LLNMIGALDVPDS 59
Query: 58 GSVRLLGYDIFKEPIKAK---ERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKR 114
G++ + G D+ +E ++ E +GF+ + + LTA N++ + + + E+R
Sbjct: 60 GTICVAGRDLSRERDLSRLRAEEIGFVFQLHNLIPNLTALENVEI--PMFAVKHENMEER 117
Query: 115 IEELLKLVGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQ-GARLV 173
ELL+ V L D +RK S G +QR+ +A+AL NDP +++ DEPT LD + R++
Sbjct: 118 AMELLEYVDLADKAHRKPTELSGGERQRVAIARALANDPSIILADEPTGSLDSRTSQRVL 177
Query: 174 KDIILEQKKQGKTVFFSSH 192
+ + Q+ +G T+ +H
Sbjct: 178 RKLRELQEDEGVTLVVVTH 196
>pir||F82386 amino acid ABC transporter, ATP-binding protein VCA1037 [imported]
- Vibrio cholerae (group O1 strain N16961)
>gi|9658480|gb|AAF96931.1| (AE004429) amino acid ABC
transporter, ATP-binding protein [Vibrio cholerae]
Length = 239
Score = 113 bits (279), Expect = 3e-24
Identities = 67/222 (30%), Positives = 124/222 (55%), Gaps = 3/222 (1%)
Query: 1 MKVIEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSV 60
MKVIE ++K YG+F+A+ ++SL V KG I GP+G+GK+T I ++ G+ DSG +
Sbjct: 1 MKVIEFHQVSKWYGQFQALKSISLTVNKGEIVVICGPSGSGKSTLIRTVNGLESIDSGEI 60
Query: 61 RLLGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFA-SFYNIPKQEKEKRIEELL 119
+L E + ++G + ++ ++ LT NL + QE ++R L
Sbjct: 61 IVLPE--LDERTRRSGKIGMVFQHFNLFPHLTVLENLTLAPIRTLKLSAQEAKERAYHFL 118
Query: 120 KLVGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILE 179
+ V + D ++ S G +QR+ +A++L PE+L+ DEPTS LDP+ V +++++
Sbjct: 119 QRVKITDQTHKYPIQLSGGQQQRVAIARSLCMQPEILLFDEPTSALDPETINEVLEVMVD 178
Query: 180 QKKQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEI 221
+ G T+ +H + ++A +V + +G++ VG+ E++
Sbjct: 179 LAQDGITMMCVTHEMGFARKVAHRVMFMDEGEILEVGSPEQL 220
>pir||H72356 amino acid ABC transporter, ATP-binding protein - Thermotoga
maritima (strain MSB8)
>gi|4981110|gb|AAD35676.1|AE001734_3 (AE001734) amino
acid ABC transporter, ATP-binding protein [Thermotoga
maritima]
Length = 242
Score = 112 bits (278), Expect = 5e-24
Identities = 67/223 (30%), Positives = 124/223 (55%), Gaps = 2/223 (0%)
Query: 1 MKVIEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSV 60
M V++IE+L K +GK + + LEV+KG + +GP+G+GK+T + + + G +
Sbjct: 1 MTVLKIEDLHKYFGKLYVLRGIDLEVKKGEVISIIGPSGSGKSTLLRCINLLEEYQRGKI 60
Query: 61 RLLGYDIFKEPI-KAKERLGFLPENATIYEELTAWRNLDFFA-SFYNIPKQEKEKRIEEL 118
G I I + + +G + + ++ L+ NL N+ K E ++ ++L
Sbjct: 61 YFKGELITHRNINRIRSSIGMVFQQFNLFPHLSVLNNLTLAPMKVKNMQKDEAVEKAKKL 120
Query: 119 LKLVGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIIL 178
L+ VGL + K + S G +QR+ +A+AL+ DPEL++ DEPTS LDP+ + V D+I
Sbjct: 121 LERVGLIEKINEKPGNLSGGQQQRVAIARALMMDPELMLFDEPTSALDPELVKEVLDVIK 180
Query: 179 EQKKQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEI 221
+ + G T+ +H + +++D+V + +G++ +G E+I
Sbjct: 181 DLAQSGMTMLIVTHEMRFARDVSDRVVFMDEGRIVEMGPPEKI 223
>emb|CAC11277.1| (AL445063) probable trehalose/maltose transport ATP-hydrolyzing
subunit MalK [Thermoplasma acidophilum]
Length = 371
Score = 112 bits (278), Expect = 5e-24
Identities = 73/226 (32%), Positives = 122/226 (53%), Gaps = 14/226 (6%)
Query: 1 MKVIEIENLTKSYGK------FKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIII 54
M V+ +E++T+ +GK V +++L + G F LGP+G+GK+T + + G+
Sbjct: 1 MTVVRLEHVTRDFGKNSPNGPHTGVFDINLTINNGEFFVILGPSGSGKSTMLRIIAGLEK 60
Query: 55 PDSGSVRLLGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKR 114
DSG + L Y+I P K ++ + + +N +Y +T + N+ F I KQE ++R
Sbjct: 61 VDSGHIFLDEYEITDFPPKDRD-MAMVFQNYALYPFMTVYDNIAFPLKIQKISKQEIDER 119
Query: 115 IEELLKLVGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVK 174
+ E+ KL+ + + K S G +QR+ L +A+I P + ++DEP S LD A+L
Sbjct: 120 VREVAKLLDIEGILNMKPGQISGGQRQRVALGRAIIRRPAVFLMDEPLSNLD---AKLRG 176
Query: 175 DIILEQKK----QGKTVFFSSHILSEVEELADKVGIIVKGKLRTVG 216
+ +E KK G T + +H E LAD+VG+I +G L VG
Sbjct: 177 TMRVELKKLHEQLGITTIYVTHDQIEAMTLADRVGVINRGNLIQVG 222
>pir||G69043 cobalt transport ATP-binding protein O - Methanobacterium
thermoautotrophicum (strain Delta H)
>gi|2621173|gb|AAB84639.1| (AE000802) cobalt transport
ATP-binding protein O [Methanobacterium
thermoautotrophicum]
Length = 280
Score = 112 bits (277), Expect = 6e-24
Identities = 68/242 (28%), Positives = 131/242 (54%), Gaps = 9/242 (3%)
Query: 1 MKVIEIENLTKSYGK-FKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGS 59
M++IE ++ +Y +A+ ++ E+G + LGPNGAGK+T L GI+ P SG
Sbjct: 3 MRIIEAVDIRYTYPDGTEALRGINFHAERGEVVALLGPNGAGKSTLFLHFNGILQPTSGK 62
Query: 60 VRLLGYDIFKEP---IKAKERLGFLPENATIYEELTAWR---NLDFFASFYNIPKQEKEK 113
+ + G ++ IKA++++G + +N ++L A R ++ F + + E E+
Sbjct: 63 IMIDGEELDYSKSGLIKARQKVGIVFQNPD--DQLFAPRVDEDVAFGPLNMGLSEDEVEE 120
Query: 114 RIEELLKLVGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLV 173
R+ + L+ VG+ + FS G K+R+ +A + P++++LDEPTSGLDP+GA +
Sbjct: 121 RVRDALQKVGMLGYESKPPHHFSGGEKKRVAIAGIIAMKPDIMVLDEPTSGLDPRGASQI 180
Query: 174 KDIILEQKKQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYEI 233
++ ++G T+ S+H + +D++ II G++ + G E+ + G +
Sbjct: 181 LRLLHNLNEEGMTIIISTHDVDLAPLYSDRIYIISDGEIISTGAPSEVFSDIDTIRGANL 240
Query: 234 KV 235
++
Sbjct: 241 RL 242
>pir||C70355 ABC transporter - Aquifex aeolicus >gi|2983231|gb|AAC06828.1|
(AE000698) ABC transporter [Aquifex aeolicus]
Length = 232
Score = 112 bits (277), Expect = 6e-24
Identities = 72/206 (34%), Positives = 116/206 (55%), Gaps = 10/206 (4%)
Query: 1 MKVIEIENLTKSY-GKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGS 59
M+VIE++NLT SY GK ++++S VEKG G +GPNGAGK+T + +LG + P SG
Sbjct: 1 MRVIEVKNLTFSYDGKHNVLEDVSFYVEKGDFLGIVGPNGAGKSTLLKLILGFLKPKSGE 60
Query: 60 VRLLGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELL 119
+ L G I E K +R+G++P+ ++ E + +S E +K I+ L+
Sbjct: 61 IYLFGKKI--EEFKDWKRVGYVPQRLSV-EHAFPGTVKELLSSVC-----EDKKEIDYLV 112
Query: 120 KLVGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILE 179
+ + L ++ ++ S G +QR+LLA AL +PEL++LDEPT GLD I+L+
Sbjct: 113 EFLKLKNIVNKQFTKLSGGQQQRVLLAMALSYNPELILLDEPTVGLDVHAINHFMSILLD 172
Query: 180 -QKKQGKTVFFSSHILSEVEELADKV 204
K++ SH + + + A K+
Sbjct: 173 LNMNHKKSIVMISHDIGTLLKHASKI 198
>pir||T45265 cobalt transport ATP-binding protein O homolog [imported] -
Methanobacterium thermoautotrophicum
>gi|1419078|emb|CAA63958.1| (X94292) cbiO
[Methanobacterium thermoautotrophicum]
Length = 277
Score = 111 bits (276), Expect = 8e-24
Identities = 74/242 (30%), Positives = 132/242 (53%), Gaps = 10/242 (4%)
Query: 1 MKVIEIENLTKSYGK-FKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGS 59
MK+IE N+ +Y +A+ + +KG + LGPNGAGK+T L GI+ P SG
Sbjct: 1 MKIIEAVNIRYTYPDGTEALKGIDFHAKKGEVVALLGPNGAGKSTLFLHFNGILQPTSGK 60
Query: 60 VRLLGYDIFKEP---IKAKERLGFLPENATIYEELTAWR---NLDFFASFYNIPKQEKEK 113
V + G +I IK ++++G + +N ++L A R ++ F + + E E+
Sbjct: 61 VLVDGKEIDYSKSGLIKVRQKVGIVFQNPD--DQLFAPRVDEDVAFGPLNMGLDEDEVEE 118
Query: 114 RIEELLKLVGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLV 173
R+++ L+ VG+ R S G K+R+ +A L P+++ILDEPTSGLDP+GA +
Sbjct: 119 RVKDALRKVGMSGTR-TDPHHLSGGEKKRVAIAGILAMKPDIMILDEPTSGLDPRGASQI 177
Query: 174 KDIILEQKKQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYEI 233
++ E ++G T+ S+H + +D++ II G++ + GT ++ + G ++
Sbjct: 178 LRLLHELNEEGMTIIISTHDVDLAPLYSDRIYIISGGEIISEGTPGDVFSDIDTIRGADL 237
Query: 234 KV 235
++
Sbjct: 238 RL 239
>gi|11498623 ABC transporter, ATP-binding protein [Archaeoglobus fulgidus]
>gi|7445942|pir||B69377 ABC transporter, ATP-binding
protein homolog - Archaeoglobus fulgidus
>gi|2649576|gb|AAB90224.1| (AE001033) ABC transporter,
ATP-binding protein [Archaeoglobus fulgidus]
Length = 228
Score = 111 bits (275), Expect = 1e-23
Identities = 74/226 (32%), Positives = 128/226 (55%), Gaps = 13/226 (5%)
Query: 1 MKVIEIENLTK----SYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIII-P 55
MKV+E+ N+ K Y + +A+D +S++VE+G +GP+G+GK+T +L+++G + P
Sbjct: 1 MKVVELRNVYKIYRTEYYEVRALDGVSMDVEEGEFVVIMGPSGSGKST-LLNLIGCLDKP 59
Query: 56 DSGSVRLLGYDIF-----KEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQE 110
G V + G + + ++ +GF+ + + LTA N++ F + ++E
Sbjct: 60 TEGEVLINGVETSSLNDNRLTELRRDTIGFIFQTYNLIPTLTALENVELPMIFKGVGRRE 119
Query: 111 KEKRIEELLKLVGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGA 170
+E+R +ELLK VGL RK S G +QR+ +A+AL N+P++L+ DEPT LD +
Sbjct: 120 REERAKELLKNVGLEKEMNRKPNEMSGGQQQRVAIARALANNPKILLCDEPTGNLDTKSG 179
Query: 171 RLVKDIILEQKK-QGKTVFFSSHILSEVEELADKVGIIVKGKLRTV 215
V +II Q + G TV +H S + + D+V + GK+ +V
Sbjct: 180 EQVMEIIRHQNEVLGVTVILVTHDPS-LAKYGDRVIRLRDGKIESV 224
>pir||D75187 probable maltose/maltodextrin transport ATP-binding PAB2336 -
Pyrococcus abyssi (strain Orsay)
>gi|5457456|emb|CAB48947.1| (AJ248283) hypothetical
MALTOSE/MALTODEXTRIN TRANSPORT ATP-BINDING [Pyrococcus
abyssi]
Length = 364
Score = 111 bits (275), Expect = 1e-23
Identities = 74/280 (26%), Positives = 142/280 (50%), Gaps = 8/280 (2%)
Query: 1 MKVIEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSV 60
M + +ENLTK +G F AV+ L+L ++ G LGP+G GKTTT+ + G+ P G +
Sbjct: 1 MVEVRLENLTKKFGNFTAVNKLNLTIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTEGKI 60
Query: 61 RLLGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLK 120
++ P + + + + ++ ++ +T + N+ F P+ E +KR+ +
Sbjct: 61 YFGDREVTYLPPR-ERNISMVFQSYAVWPHMTVYDNIAFPLKIKKFPRDEIDKRVRWAAE 119
Query: 121 LVGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQ-GARLVKDIILE 179
L+ + ++ R S G +QR+ +A+A++ +P++L++DEP S LD + + +I
Sbjct: 120 LLQIEELLDRYPAQLSGGQRQRVAVARAIVVEPDVLLMDEPLSNLDAKLRVAMRAEIKKL 179
Query: 180 QKKQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYEIKVETKQ 239
Q+K T + +H E + D++ ++ +G+L VG E+ L+ + V T
Sbjct: 180 QQKLKVTTIYVTHDQVEAMTMGDRIAVMNRGQLLQVGPPTEV-----YLKPNSVFVATFI 234
Query: 240 PFPEIELPDVIRIEKIADNK-VLIFAKSDIREILSEELSK 278
PE+ + +V + + K I DI E+L + + K
Sbjct: 235 GAPEMNIVEVSVGDGYLEGKGFKIELPQDIMELLRDYIGK 274
>pir||F72421 iron(III) ABC transporter, ATP-binding protein - Thermotoga
maritima (strain MSB8)
>gi|4980566|gb|AAD35172.1|AE001694_8 (AE001694)
iron(III) ABC transporter, ATP-binding protein
[Thermotoga maritima]
Length = 256
Score = 110 bits (273), Expect = 2e-23
Identities = 64/227 (28%), Positives = 121/227 (53%), Gaps = 7/227 (3%)
Query: 1 MKVIEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSV 60
M+++ IENL Y ++ N++L V+KG FG +GPNG+GKTT + ++GI P G+V
Sbjct: 1 MEIVRIENLFFQYRGGFSLKNINLSVKKGEFFGIIGPNGSGKTTLLKILVGIFRPQKGTV 60
Query: 61 RLLGYDIFKEPIKAKERL------GFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKR 114
+LLG ++ K ++ F P +E+ L + ++++E
Sbjct: 61 QLLGRIPWETSRKEMAKIVTLVSQDFFPSYDFSVKEIVEMGRLPHLSLLSGTSRKDEEIV 120
Query: 115 IEELLKLVGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVK 174
++ L+L G R + S G +++++L++A++ D E+L++DE T+ LD LV
Sbjct: 121 LKS-LELTGTLKFVDRNFWTLSSGERRKVVLSKAIVQDTEILLIDELTAHLDYNNVSLVG 179
Query: 175 DIILEQKKQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEI 221
+++ K+ GKT+ H ++ L D++G++ G++ G E+
Sbjct: 180 NVLKRLKESGKTIISVFHDINVASALCDRIGVMKNGEMIKTGAPPEV 226
>pir||G71192 probable cobalt transport ATP-binding protein - Pyrococcus
horikoshii >gi|3258251|dbj|BAA30934.1| (AP000007) 284aa
long hypothetical cobalt transport ATP-binding protein
[Pyrococcus horikoshii]
Length = 284
Score = 109 bits (271), Expect = 3e-23
Identities = 79/250 (31%), Positives = 132/250 (52%), Gaps = 14/250 (5%)
Query: 1 MKVIEIENLTKSYGKFK--AVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDS- 57
M VIE+E+++ YG + ++ +++LE+ KG G +GP+G+GK+T L++ G+I P S
Sbjct: 1 MNVIEVEDVSFRYGNSREYSLRHINLEIRKGEFLGIIGPSGSGKSTFCLTLNGLI-PHSI 59
Query: 58 -----GSVRLLGYDIFKEPIK---AKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQ 109
G+V + G + + + K L F ++ ++ +T + F I +
Sbjct: 60 AGEFHGNVIVDGLNTREHSVSELSTKVGLVFQNPDSQLFN-MTVLEEVAFALENLGIERD 118
Query: 110 EKEKRIEELLKLVGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQG 169
E +RI LKLV LWD R + S G KQRL +A L+ P++L+LDEPTS LDP G
Sbjct: 119 EMWRRIRWALKLVRLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLG 178
Query: 170 ARLVKDII-LEQKKQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMEL 228
V +I L K++ T+ H + E AD++ + KG++ G E++ + L
Sbjct: 179 REEVLGLIKLLNKEEKITIILVEHNTDFLLEHADRIVVFDKGRIVLEGKPEDVFENVEFL 238
Query: 229 EGYEIKVETK 238
+K+ T+
Sbjct: 239 RTIGVKLPTR 248
>pir||A72279 sugar ABC transporter, ATP-binding protein - Thermotoga maritima
(strain MSB8) >gi|4981786|gb|AAD36307.1|AE001779_9
(AE001779) sugar ABC transporter, ATP-binding protein
[Thermotoga maritima]
Length = 355
Score = 109 bits (271), Expect = 3e-23
Identities = 67/268 (25%), Positives = 138/268 (51%), Gaps = 2/268 (0%)
Query: 1 MKVIEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSV 60
M ++I+ + K +G +A+D + L V +G LGP+G GKTT + + G+ G +
Sbjct: 1 MAQVKIDGVKKYFGNVRALDGIDLVVNEGEFLVLLGPSGCGKTTLLRCIAGLEQVTGGKI 60
Query: 61 RLLGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLK 120
D+ P K + + + ++ ++ + + N+ + +PK+E EKR++
Sbjct: 61 FFNDRDVTNLPPKDRN-ISMVFQSYAVWPHMKVYDNIAYPLKLKKVPKEEIEKRVKWAAD 119
Query: 121 LVGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDP-QGARLVKDIILE 179
L+ + ++ R S G +QR+ +A+A++++PE+L++DEP S LD ++ ++
Sbjct: 120 LLHISELLDRYPAQLSGGQRQRVAVARAIVHEPEVLLMDEPLSNLDALLRVKMRSELKKL 179
Query: 180 QKKQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYEIKVETKQ 239
Q++ G T + +H +E + D++ ++ +GKL+ VGT EI + + +
Sbjct: 180 QERIGVTTIYVTHDQTEAMTMGDRIAVMNQGKLQQVGTPSEIYHHPVNIFVAGFVGSPQM 239
Query: 240 PFPEIELPDVIRIEKIADNKVLIFAKSD 267
F E+E+ + + ++ I AK+D
Sbjct: 240 NFLEMEVRSEGNSVVLQNGEIKIPAKTD 267
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.317 0.140 0.382
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 108201836
Number of Sequences: 2977
Number of extensions: 4645303
Number of successful extensions: 24527
Number of sequences better than 1.0e-10: 1840
Number of HSP's better than 0.0 without gapping: 339
Number of HSP's successfully gapped in prelim test: 1501
Number of HSP's that attempted gapping in prelim test: 21149
Number of HSP's gapped (non-prelim): 2286
length of query: 305
length of database: 189,106,746
effective HSP length: 58
effective length of query: 247
effective length of database: 154,394,500
effective search space: 38135441500
effective search space used: 38135441500
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.6 bits)
S2: 165 (68.7 bits)