BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB1852 (PAB1852) DE:Hypothetical protein
(232 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||B75121 hypothetical protein PAB1852 - Pyrococcus abyssi (st... 471 e-132
pir||E71010 hypothetical protein PH1379 - Pyrococcus horikoshii ... 437 e-122
pir||E64369 hypothetical protein MJ0557 - Methanococcus jannasch... 163 1e-39
emb|CAC12251.1| (AL445066) conserved hypothetical protein [Therm... 155 3e-37
gi|11498341 conserved hypothetical protein [Archaeoglobus fulgid... 150 1e-35
gb|AAK42396.1| Conserved hypothetical protein [Sulfolobus solfat... 142 3e-33
pir||G72746 hypothetical protein APE0502 - Aeropyrum pernix (str... 97 2e-19
sp|Q10107|MRA1_SCHPO MULTICOPY SUPPRESSOR OF RAS1 (MRA1 SUPPRESS... 86 3e-16
pir||T47760 hypothetical protein F24I3.80 - Arabidopsis thaliana... 76 3e-13
gi|6323215 Ylr186wp [Saccharomyces cerevisiae] >gi|1077413|pir||... 73 2e-12
gb|AAC51641.1| (U72514) C2f [Homo sapiens] 73 2e-12
gb|AAF35325.1|AF222909_1 (AF222909) Ylr186 [Candida albicans] 73 2e-12
gi|7305109 gene rich cluster, C2f gene [Mus musculus] >gi|228990... 72 5e-12
pir||T26736 hypothetical protein Y39A1A.14 - Caenorhabditis eleg... 72 5e-12
gb|AAF45956.1| (AE003431) CG3527 gene product [Drosophila melano... 72 7e-12
>pir||B75121 hypothetical protein PAB1852 - Pyrococcus abyssi (strain Orsay)
>gi|5458194|emb|CAB49683.1| (AJ248285) hypothetical
protein [Pyrococcus abyssi]
Length = 232
Score = 471 bits (1198), Expect = e-132
Identities = 232/232 (100%), Positives = 232/232 (100%)
Query: 1 MSEKKRLHLIIADAELETVPEQILDHPAIVNYAKRRKRKPEKIILDSTYHHAALKQLEDG 60
MSEKKRLHLIIADAELETVPEQILDHPAIVNYAKRRKRKPEKIILDSTYHHAALKQLEDG
Sbjct: 1 MSEKKRLHLIIADAELETVPEQILDHPAIVNYAKRRKRKPEKIILDSTYHHAALKQLEDG 60
Query: 61 ERRGRPDIVHICLLNALDSILNKEDRLRVYVHTRNDYVIYIKPETRLPRNYNRFIGLMES 120
ERRGRPDIVHICLLNALDSILNKEDRLRVYVHTRNDYVIYIKPETRLPRNYNRFIGLMES
Sbjct: 61 ERRGRPDIVHICLLNALDSILNKEDRLRVYVHTRNDYVIYIKPETRLPRNYNRFIGLMES 120
Query: 121 LFEKGAVPEDLELLRLERKTLQELINEINPDAVFVMHEEGELMIPKNFGKLLDKFKKPAV 180
LFEKGAVPEDLELLRLERKTLQELINEINPDAVFVMHEEGELMIPKNFGKLLDKFKKPAV
Sbjct: 121 LFEKGAVPEDLELLRLERKTLQELINEINPDAVFVMHEEGELMIPKNFGKLLDKFKKPAV 180
Query: 181 IIGGFPHGDFRSRVEGVKISLYKEPLMAWTIVNEVIVSYEWEVIKKFSTKFI 232
IIGGFPHGDFRSRVEGVKISLYKEPLMAWTIVNEVIVSYEWEVIKKFSTKFI
Sbjct: 181 IIGGFPHGDFRSRVEGVKISLYKEPLMAWTIVNEVIVSYEWEVIKKFSTKFI 232
>pir||E71010 hypothetical protein PH1379 - Pyrococcus horikoshii
>gi|3257802|dbj|BAA30485.1| (AP000006) 229aa long
hypothetical protein [Pyrococcus horikoshii]
Length = 229
Score = 437 bits (1112), Expect = e-122
Identities = 208/229 (90%), Positives = 222/229 (96%)
Query: 1 MSEKKRLHLIIADAELETVPEQILDHPAIVNYAKRRKRKPEKIILDSTYHHAALKQLEDG 60
M EKKRLHLIIADAELETVP +ILDHPAIVNYAKRRK++PEKIILDSTYHHAAL+QLEDG
Sbjct: 1 MEEKKRLHLIIADAELETVPPEILDHPAIVNYAKRRKKRPEKIILDSTYHHAALRQLEDG 60
Query: 61 ERRGRPDIVHICLLNALDSILNKEDRLRVYVHTRNDYVIYIKPETRLPRNYNRFIGLMES 120
ERRGRPDIVHICLLNALDSILNKEDRLRVYVHTRNDYVIYIKPETRLPRNYNRFIGLME+
Sbjct: 61 ERRGRPDIVHICLLNALDSILNKEDRLRVYVHTRNDYVIYIKPETRLPRNYNRFIGLMEN 120
Query: 121 LFEKGAVPEDLELLRLERKTLQELINEINPDAVFVMHEEGELMIPKNFGKLLDKFKKPAV 180
LFEKGAVPEDLELLR+E+KTL ELI EINPD VF+MHEEGELMIPKNFGKLLDKFKKP V
Sbjct: 121 LFEKGAVPEDLELLRMEKKTLNELIEEINPDVVFIMHEEGELMIPKNFGKLLDKFKKPTV 180
Query: 181 IIGGFPHGDFRSRVEGVKISLYKEPLMAWTIVNEVIVSYEWEVIKKFST 229
I+GGFPHGDF+S+V+GVKISLY+EPLMAWTIVNEVIVSYEWEVIKKF +
Sbjct: 181 IVGGFPHGDFKSKVDGVKISLYREPLMAWTIVNEVIVSYEWEVIKKFKS 229
>pir||E64369 hypothetical protein MJ0557 - Methanococcus jannaschii
>gi|1591263|gb|AAB98551.1| (U67505) conserved
hypothetical protein [Methanococcus jannaschii]
Length = 205
Score = 163 bits (409), Expect = 1e-39
Identities = 96/217 (44%), Positives = 138/217 (63%), Gaps = 24/217 (11%)
Query: 8 HLIIADAELETVPEQILDHPAIVNYAKRRKRKPEKI-ILDSTYHHAALKQLEDGERRGRP 66
++I+A + LE +PE+I + K RK + K ILDS YH+ A+++L+D E RGRP
Sbjct: 4 NIILAKSALELIPEEIKN--------KIRKSRVYKYDILDSNYHYKAMEKLKDKEMRGRP 55
Query: 67 DIVHICLLNALDSILNKEDRLRVYVHTRNDYVIYIKPETRLPRNYNRFIGLMESLFEKGA 126
DI+HI LLN LDS +N E +L +Y+HT +D V+ I PETRLPRNY RF+G+ME + KG
Sbjct: 56 DIIHISLLNILDSPINHEKKLNIYIHTYDDKVLKINPETRLPRNYFRFLGVMEKVL-KG- 113
Query: 127 VPEDLELLRLERKTLQELINEINPDAVFVMHEEGELMIPKNFGKLLDKFKKPAVIIGGFP 186
E L+++E KTL++L+NEIN + +M + G+L P KLL ++ IIGGFP
Sbjct: 114 --ERNHLIKMEEKTLEDLLNEINAKKIAIMTKTGKLTHP----KLLKEY--DTFIIGGFP 165
Query: 187 HGDFRSRVEGV-----KISLYKEPLMAWTIVNEVIVS 218
+G + E V +IS+Y + LMAWT+ + S
Sbjct: 166 YGKLKINKEKVFGDIKEISIYNKGLMAWTVCGIICYS 202
>emb|CAC12251.1| (AL445066) conserved hypothetical protein [Thermoplasma
acidophilum]
Length = 205
Score = 155 bits (389), Expect = 3e-37
Identities = 80/199 (40%), Positives = 126/199 (63%), Gaps = 9/199 (4%)
Query: 27 PAIVNYAKRRKRKPEKIILDSTYHHAALKQL--EDGERRGRPDIVHICLLNALDSILNKE 84
PAI +AK+R ++ +++ILDS Y H ++ + + +RRGRPDI+++ L +SILN +
Sbjct: 5 PAIRRFAKKRNKRVDRMILDSNYMHTSIDRYFPNESKRRGRPDIIYLLLEMTQESILNHK 64
Query: 85 DRLRVYVHTRNDYVIYIKPETRLPRNYNRFIGLMESLFEKGAVPED-LELLRLERKTLQE 143
++LR YVHTRN+ VI I P TR+P++YNRFIGL E LFEK + + ELL +E +L +
Sbjct: 65 NQLRTYVHTRNNQVIRISPITRMPKSYNRFIGLFEDLFEKRIITNNGKELLSMEESSLGD 124
Query: 144 LINEINPDAVFVMHEEGELMIPKNFGKLLDKFKKPAVIIGGFPHGDFRSRVEGV--KISL 201
LIN I D ++H +GE+ P F + ++IGGF GDF S + + ++
Sbjct: 125 LINSIRRDRTILLHPKGEMRKPSEFISNANIL----IVIGGFSEGDFISDTSFINERYAI 180
Query: 202 YKEPLMAWTIVNEVIVSYE 220
+ + L W++ NE++ +YE
Sbjct: 181 FDQELTIWSVANEMVANYE 199
>gi|11498341 conserved hypothetical protein [Archaeoglobus fulgidus]
>gi|7483050|pir||F69341 conserved hypothetical protein
AF0734 - Archaeoglobus fulgidus
>gi|2649877|gb|AAB90504.1| (AE001054) conserved
hypothetical protein [Archaeoglobus fulgidus]
Length = 219
Score = 150 bits (376), Expect = 1e-35
Identities = 92/217 (42%), Positives = 126/217 (57%), Gaps = 17/217 (7%)
Query: 10 IIADAELETVPEQILDHPAIVNYAKRRKRKPEKIILDSTYHHAALKQLEDGERRGRPDIV 69
+ +A LE +P++I HPA+ A RR ++PEKI+LD + HH A+K LE E+RGRPDIV
Sbjct: 6 VFLEASLELIPQKIRGHPAVRADAIRRGKRPEKILLDDSKHHTAMKSLEFREKRGRPDIV 65
Query: 70 HICLLNALDSILNKEDRLRVYVHTRNDYVIYIKPETRLPRNYNRFIGLMESLFEKGAVPE 129
H CLL LDS L VYVHT N +I++ ETRLPRNYNRF+GLME LFE+ +
Sbjct: 66 HQCLLLLLDSPLRD---FEVYVHTLNGEIIWVNRETRLPRNYNRFVGLMEKLFEERRITA 122
Query: 130 -DLELLRLERKTLQELINEINPDAVFVMHEEGELMIPKNFGKLLDKFKKPAVIIGGFPHG 188
D L+ + L++++ + V + E+G F +LLD AV IG FPHG
Sbjct: 123 GDTTLIEFKDVGLRDIVRGRD---VLLFREKGGRF---EFSELLD--GDVAVCIGAFPHG 174
Query: 189 DF-----RSRVEGVKISLYKEPLMAWTIVNEVIVSYE 220
DF R E ++SL E + + + V+ YE
Sbjct: 175 DFFEETLRELGEFKEVSLGTESYTSLYVTSRVLCEYE 211
>gb|AAK42396.1| Conserved hypothetical protein [Sulfolobus solfataricus]
Length = 223
Score = 142 bits (355), Expect = 3e-33
Identities = 76/198 (38%), Positives = 121/198 (60%), Gaps = 11/198 (5%)
Query: 7 LHLIIADAELETVPEQILDHPAIVNYAKRRKRKPEKIILDSTYHHAALKQLEDGERRGRP 66
L++I+ +A LE VP++I++HPA++ AKRR +KPE +LD + H+ A+K LE+ +RGRP
Sbjct: 8 LNIILLEASLELVPKEIVNHPAVIKNAKRRNKKPEDTLLDISLHYHAMKYLENSHKRGRP 67
Query: 67 DIVHICLLNALDSILNKEDRLRVYVHTRNDYVIYIKPETRLPRNYNRFIGLMESLFEKGA 126
DI+H LL L + K D +++HT +I + P R P+NY RFIGLME L + G
Sbjct: 68 DILHQALLVILTDPVIKGD---IFIHTIQSKIIKVNPNMRPPKNYLRFIGLMEQLLKYGK 124
Query: 127 VP--EDLELLRLERKTLQELINEINPDAVFVMHEEGELMIPKNFGKLLDKFKKPAVIIGG 184
+P D L+ + TL ++N + + ++ E+GE + P+ KL +K+ + IG
Sbjct: 125 IPINGDETLMEVTNLTLDNIVNRYD---LILLSEKGEKINPEEICKLDEKW---LLGIGA 178
Query: 185 FPHGDFRSRVEGVKISLY 202
FPHGDF ++ + +Y
Sbjct: 179 FPHGDFSDKILNLAKKIY 196
>pir||G72746 hypothetical protein APE0502 - Aeropyrum pernix (strain K1)
>gi|5104151|dbj|BAA79467.1| (AP000059) 224aa long
hypothetical protein [Aeropyrum pernix]
Length = 224
Score = 96.7 bits (237), Expect = 2e-19
Identities = 60/220 (27%), Positives = 102/220 (46%), Gaps = 9/220 (4%)
Query: 7 LHLIIADAELETVPEQILDHPAIVNYAKRRKRKPEKIILDSTYHHAALKQLEDGERRGRP 66
+ ++ + +E VP + HP ++ A+R +P ++LD + H+ A+ +L +RGRP
Sbjct: 1 MKIVFLECSVELVPRSLWSHPQVLKSARRYGIEPGDLLLDKSLHYNAMAELPAKWKRGRP 60
Query: 67 DIVHICLLNALDSILNKEDRLRVYVHTRNDYVIYIKPETRLPRNYNRFIGLMESLFEKGA 126
DI+H+ LL DS L E LR+Y + + + R+P+NY RF GL+ L +
Sbjct: 61 DILHVALLTTTDSPLYNEGLLRIYFQVYDGRLFEVGTGVRVPKNYERFRGLVAQLLKTER 120
Query: 127 VP--EDLELLRLERKTLQELINEINPDAVFVMHEEGELMIPKNFGKLLDKFKKPAVIIGG 184
VP E L+RL ++L E + +M E+G P + +G
Sbjct: 121 VPPGEGEALIRLHSRSLAEFVE--REGRFILMWEKGSPTTTTYVAARALSTGLP-IGVGC 177
Query: 185 FPHGDFRSRVEGVKISLYK----EPLMAWTIVNEVIVSYE 220
FP G+F+ Y PL W + + ++ + E
Sbjct: 178 FPRGEFKRSTLRKASEAYSIMGGAPLKTWGVASRIVYALE 217
>sp|Q10107|MRA1_SCHPO MULTICOPY SUPPRESSOR OF RAS1 (MRA1 SUPPRESSOR PROTEIN)
>gi|7490511|pir||T37921 ras associated mra1 protein
[validated] - fission yeast (Schizosaccharomyces pombe)
>gi|2809085|dbj|BAA24497.1| (D78582) Mra1
[Schizosaccharomyces pombe] >gi|3702196|emb|CAA92394.1|
(Z68198) downstream factor of ras [Schizosaccharomyces
pombe]
Length = 359
Score = 86.2 bits (210), Expect = 3e-16
Identities = 60/203 (29%), Positives = 96/203 (46%), Gaps = 7/203 (3%)
Query: 23 ILDHPAIVNYAKRRKRKPEKIILDSTYHHAALKQLEDGERRGRPDIVHICLLNALDSILN 82
+LD + Y + + + +L+ H LK+L + RPDI H CLL LDS LN
Sbjct: 153 VLDQACLEIYKVGKAKDAKYQLLNCDDHQGILKKLNRNIAQARPDITHQCLLTLLDSPLN 212
Query: 83 KEDRLRVYVHTRNDYVIYIKPETRLPRNYNRFIGLMESLFEK---GAVPEDLELLRLERK 139
K RL+VY+HT +I + P R+PR + RF GLM L K +V + +LL++ +
Sbjct: 213 KAGRLQVYIHTAKKVLIEVNPSVRIPRTFKRFSGLMVQLLHKLSIRSVNGNEKLLKVIKN 272
Query: 140 TLQELINEINPDAVFVMHEEGELMIPKNFGKLLDKFKKPAVIIGGFPHG--DFRSRVEGV 197
+ + + A + + + P+ + + L + + IG HG DF
Sbjct: 273 PVTDYLPPNCRKA--TLSFDAPTVPPRKYLETLQPNQSVCIAIGAMAHGPDDFSDGWVDE 330
Query: 198 KISLYKEPLMAWTIVNEVIVSYE 220
KIS+ PL A ++ + S E
Sbjct: 331 KISISDYPLSASIACSKFLHSME 353
>pir||T47760 hypothetical protein F24I3.80 - Arabidopsis thaliana
>gi|6911870|emb|CAB72170.1| (AL138655) putative protein
[Arabidopsis thaliana]
Length = 298
Score = 76.5 bits (185), Expect = 3e-13
Identities = 54/188 (28%), Positives = 88/188 (46%), Gaps = 7/188 (3%)
Query: 44 ILDSTYHHAALKQLEDGERRGRPDIVHICLLNALDSILNKEDRLR-VYVHTRNDYVIYIK 102
+L+S H LK+ RPDI H LL LDS +NK RL+ VYV T + +K
Sbjct: 111 LLNSDDHANFLKKNNRNPADYRPDITHQALLMILDSPVNKAGRLKAVYVRTEKGVLFEVK 170
Query: 103 PETRLPRNYNRFIGLMESLFEK---GAVPEDLELLRLERKTLQELINEINPDAVFVMHEE 159
P R+PR + RF G+M L +K AV +LLR + ++E +N + H
Sbjct: 171 PHVRIPRTFKRFAGIMLQLLQKLSITAVNSREKLLRCVKNPIEEHHLPVNSHRIGFSHSS 230
Query: 160 GELM-IPKNFGKLLDKFKKPAVIIGGFPHGDFRSRVEGVKISLYKEPLMAWTIVNEV--I 216
+L+ + K+ + D + ++G HG +S+ + PL A ++ +
Sbjct: 231 EKLVNMQKHLATVCDDDRDTVFVVGAMAHGKIDCNYIDEFVSVSEYPLSAAYCISRICEA 290
Query: 217 VSYEWEVI 224
++ W +I
Sbjct: 291 LATNWNII 298
>gi|6323215 Ylr186wp [Saccharomyces cerevisiae] >gi|1077413|pir||S51431
hypothetical protein YLR186w - yeast (Saccharomyces
cerevisiae) >gi|577197|gb|AAB67457.1| (U17246) Ylr186wp
[Saccharomyces cerevisiae]
Length = 252
Score = 73.4 bits (177), Expect = 2e-12
Identities = 59/211 (27%), Positives = 93/211 (43%), Gaps = 22/211 (10%)
Query: 5 KRLHLIIADAELETVPEQILDHPAIVNYAKRRKRKPEKIILDSTYHHAALKQLEDGERRG 64
KR+ +++A A LET H N K ++L+ H LK++
Sbjct: 39 KRMIVVLAMASLET-------HKISSNGPGGDKY----VLLNCDDHQGLLKKMGRDISEA 87
Query: 65 RPDIVHICLLNALDSILNKEDRLRVYVHTRNDYVIYIKPETRLPRNYNRFIGLMESLFEK 124
RPDI H CLL LDS +NK +L+VY+ T +I + P R+PR + RF GLM L K
Sbjct: 88 RPDITHQCLLTLLDSPINKAGKLQVYIQTSRGILIEVNPTVRIPRTFKRFSGLMVQLLHK 147
Query: 125 GAVPEDLELLRLERKTLQELINEINPD-----AVFVMHEEGELMIPKNFGKLLDKFKKPA 179
++ + E K L+ + N I + + ++ +++ + LD +
Sbjct: 148 LSI----RSVNSEEKLLKVIKNPITDHLPTKCRKVTLSFDAPVIRVQDYIEKLDDDESIC 203
Query: 180 VIIGGFPHG--DFRSRVEGVKISLYKEPLMA 208
V +G G +F K+ L PL A
Sbjct: 204 VFVGAMARGKDNFADEYVDEKVGLSNYPLSA 234
>gb|AAC51641.1| (U72514) C2f [Homo sapiens]
Length = 239
Score = 73.4 bits (177), Expect = 2e-12
Identities = 50/188 (26%), Positives = 87/188 (45%), Gaps = 13/188 (6%)
Query: 44 ILDSTYHHAALKQLEDGERRGRPDIVHICLLNALDSILNKEDRLRVYVHTRNDYVIYIKP 103
+L+ H + L + RPDI H LL +DS LN+ L+VY+HT+ + +I + P
Sbjct: 58 LLNCDKHKSILLKNGRDPGEARPDITHQSLLMLMDSPLNRAGLLQVYIHTQKNVLIEVNP 117
Query: 104 ETRLPRNYNRFIGLMESLFEKGAV-----PEDLELLRLERKTLQELINEINPDAVFVMHE 158
+TR+PR ++RF GLM L K +V P+ L K ++ +++ P +
Sbjct: 118 QTRIPRTFDRFCGLMVQLLHKLSVRAADGPQKL------LKVIKNPVSDHFPVGCMKVGT 171
Query: 159 EGELMIPKNFGKLLDKFKKPAVIIGGFPHGDFRSRVEGVKISLYKEPLMAWTIVNEVIVS 218
+ + + +L+ ++G F HG +S+ PL A ++ +
Sbjct: 172 SFSIPVVSDVRELVPSSDPIVFVVGAFAHGKVSVEYTEKMVSISNYPLSAALTCAKLTTA 231
Query: 219 YE--WEVI 224
+E W VI
Sbjct: 232 FEEVWGVI 239
>gb|AAF35325.1|AF222909_1 (AF222909) Ylr186 [Candida albicans]
Length = 267
Score = 73.4 bits (177), Expect = 2e-12
Identities = 50/169 (29%), Positives = 78/169 (45%), Gaps = 5/169 (2%)
Query: 44 ILDSTYHHAALKQLEDGERRGRPDIVHICLLNALDSILNKEDRLRVYVHTRNDYVIYIKP 103
+L+ H L+++ RPDI H CLL LDS +NK RL+VY+ T +I + P
Sbjct: 82 LLNCDDHQGLLRKMGRDIAEARPDITHQCLLTLLDSPINKAGRLQVYIQTARGVLIEVNP 141
Query: 104 ETRLPRNYNRFIGLMESLFEKGAVPEDLELLRLERKTLQELINEINPDAV--FVMHEEGE 161
R+PR + RF GLM L K ++ + + K ++ I + P + + E
Sbjct: 142 SVRIPRTFKRFSGLMVQLLHKLSIRSE-NSKEVLLKVIKNPITDHLPTKCRKVTLSFDAE 200
Query: 162 LMIPKNFGKLLDKFKKPAVIIGGFPHG--DFRSRVEGVKISLYKEPLMA 208
L +++ LD+ + V +G G +F KI L PL A
Sbjct: 201 LKRVQDYVTTLDENESICVFVGAMARGKDNFADEFVDEKIGLSDYPLSA 249
>gi|7305109 gene rich cluster, C2f gene [Mus musculus]
>gi|2289907|gb|AAC36006.1| (AC002397) C2F [Mus musculus]
Length = 244
Score = 72.2 bits (174), Expect = 5e-12
Identities = 54/190 (28%), Positives = 90/190 (46%), Gaps = 17/190 (8%)
Query: 44 ILDSTYHHAALKQLEDGERRG--RPDIVHICLLNALDSILNKEDRLRVYVHTRNDYVIYI 101
+L+ H + L L++G G RPDI H LL +DS LN+ L+VY+HT+ + +I +
Sbjct: 63 LLNCDRHKSML--LKNGRDPGEVRPDITHQSLLMLMDSPLNRAGLLQVYIHTQKNVLIEV 120
Query: 102 KPETRLPRNYNRFIGLMESLFEKGAV-----PEDLELLRLERKTLQELINEINPDAVFVM 156
P+TR+PR ++RF GLM L K +V P+ L K ++ +++ P +
Sbjct: 121 NPQTRIPRTFDRFCGLMVQLLHKLSVRAADGPQKL------LKVIKNPVSDHFPVGCMKI 174
Query: 157 HEEGELMIPKNFGKLLDKFKKPAVIIGGFPHGDFRSRVEGVKISLYKEPLMAWTIVNEVI 216
+ + +L+ ++G F HG +S+ PL A +V
Sbjct: 175 GTSFSVEDISDIRELVPSSDPVVFVVGAFAHGKVSVEYTEKMVSISNYPLSAALTCAKVT 234
Query: 217 VSYE--WEVI 224
++E W VI
Sbjct: 235 TAFEEVWGVI 244
>pir||T26736 hypothetical protein Y39A1A.14 - Caenorhabditis elegans
>gi|3880852|emb|CAA21025.1| (AL031633) Y39A1A.14
[Caenorhabditis elegans]
Length = 231
Score = 72.2 bits (174), Expect = 5e-12
Identities = 42/124 (33%), Positives = 63/124 (49%), Gaps = 17/124 (13%)
Query: 1 MSEKKRLHLIIADAELETVPEQILDHPAIVNYAKRRKRKPEKIILDSTYHHAALKQLEDG 60
+ +KK L++++ LET K E IL S H L++ +
Sbjct: 22 LEDKKILYVVLEGCSLETA-----------------KVGGEYAILSSDKHANFLRKQKKD 64
Query: 61 ERRGRPDIVHICLLNALDSILNKEDRLRVYVHTRNDYVIYIKPETRLPRNYNRFIGLMES 120
RPDI+H CLLN LDS LN+ +LRV+ T + ++ + P+ R+PR ++RF GLM
Sbjct: 65 PADYRPDILHQCLLNLLDSPLNRAGKLRVFFRTSKNVLVDVSPQCRIPRTFDRFCGLMVQ 124
Query: 121 LFEK 124
L K
Sbjct: 125 LLHK 128
>gb|AAF45956.1| (AE003431) CG3527 gene product [Drosophila melanogaster]
Length = 233
Score = 71.8 bits (173), Expect = 7e-12
Identities = 52/184 (28%), Positives = 85/184 (45%), Gaps = 11/184 (5%)
Query: 52 AALKQLEDGERRG--RPDIVHICLLNALDSILNKEDRLRVYVHTRNDYVIYIKPETRLPR 109
A L+ ++ G G RPDI H CLL DS LN+ L+V+V T ++ +I I P+TR+PR
Sbjct: 50 AQLETVKVGHHPGSCRPDITHQCLLMLFDSPLNRAGLLQVFVRTEHNVLIEINPQTRIPR 109
Query: 110 NYNRFIGLMESLFEKGAVPEDLELLRLERKTLQELINEINPDA-VFVMHEEGEL------ 162
+ RF GLM L K + + RL + + + + M G+L
Sbjct: 110 TFKRFAGLMVQLLHKFQIRANDSSRRLMSVIKNPITDHVPVGCKKYAMSFSGKLLPNCRD 169
Query: 163 MIPKNFGKLLDKFKKPAVIIGGFPHGDFRSRVEGVKISLYKEPLMAWTIVNEVIVSYE-- 220
++P + ++IG F HG ++ S+ PL A +++ ++E
Sbjct: 170 LVPHGDETSASYDEPVVIVIGAFAHGVLKTDYTEELFSISNYPLSAAIACSKICSAFEEV 229
Query: 221 WEVI 224
W V+
Sbjct: 230 WGVV 233
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.321 0.141 0.409
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 89039303
Number of Sequences: 2977
Number of extensions: 3865683
Number of successful extensions: 8773
Number of sequences better than 1.0e-10: 15
Number of HSP's better than 0.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 8747
Number of HSP's gapped (non-prelim): 16
length of query: 232
length of database: 189,106,746
effective HSP length: 54
effective length of query: 178
effective length of database: 156,788,448
effective search space: 27908343744
effective search space used: 27908343744
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.8 bits)
S2: 164 (68.3 bits)