BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB1855 (PAB1855) DE:Hypothetical protein
(247 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||E75120 hypothetical protein PAB1855 - Pyrococcus abyssi (st... 490 e-138
pir||B71011 probable ATP-dependent transporter YCF16 - Pyrococcu... 399 e-110
pir||T44565 probable ATP-dependent transport protein [imported] ... 293 1e-78
sp|P80866|V296_BACSU VEGETATIVE PROTEIN 296 (VEG296) >gi|7445790... 226 2e-58
pir||A72260 ABC transporter, ATP-binding protein - Thermotoga ma... 226 2e-58
dbj|BAB07190.1| (AP001518) ABC transporter (ATP-binding protein)... 221 5e-57
pir||T35994 probable ABC-type transport system ATP-binding chain... 217 1e-55
gi|11467361 ABC transporter subunit [Cyanophora paradoxa] >gi|13... 216 2e-55
pir||F75313 ABC transporter, ATP-binding protein, Ycf16 family -... 215 5e-55
gi|11465707 hypothetical chloroplast ORF 16. [Porphyra purpurea]... 210 1e-53
pir||B70872 probable ABC-type transporter ATP-binding protein - ... 206 1e-52
sp|P77499|YNHD_ECOLI PROBABLE ATP-DEPENDENT TRANSPORTER YNHD >gi... 206 2e-52
emb|CAC11348.1| (AL445063) FERRIC TRANSPORT ATP-BINDING PROTEIN ... 203 2e-51
emb|CAC17126.1| (AJ301654) SufC protein [Pectobacterium chrysant... 202 3e-51
gb|AAA87431.1| (U19364) unknown; putative transport protein of t... 200 1e-50
sp|Q55791|Y075_SYNY3 PROBABLE ATP-DEPENDENT TRANSPORTER SLR0075 ... 200 1e-50
sp|Q02856|ABCX_ANTSP PROBABLE ATP-DEPENDENT TRANSPORTER YCF16 >g... 198 4e-50
sp|P35020|ABCX_CYACA PROBABLE ATP-DEPENDENT TRANSPORTER YCF16 >g... 197 1e-49
pir||A69020 ABC transporter subunit Ycf16 - Methanobacterium the... 196 2e-49
pir||S72767 probable ABC-type transport protein B1496_C3_228 - M... 195 4e-49
gi|11467679 ABC transporter [Guillardia theta] >gi|5902710|sp|O7... 195 5e-49
gi|11465462 unknown [Cyanidium caldarium] >gi|6466365|gb|AAF1294... 194 6e-49
gi|11467510 ORF251 [Odontella sinensis] >gi|267152|sp|Q00830|ABC... 193 2e-48
pir||F82676 ABC transporter ATP-binding protein XF1475 [imported... 191 6e-48
gb|AAF04162.1|AC011560_3 (AC011560) putative ABC transporter ATP... 190 2e-47
pir||B72552 probable ATP-dependent transporter APE1702 - Aeropyr... 185 4e-46
sp|Q60350|Y035_METJA HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 184 9e-46
gb|AAG19051.1| (AE005004) ABC transporter, ATP-binding protein; ... 178 7e-44
pir||H71302 probable ABC transporter, ATP-binding protein - syph... 178 7e-44
gb|AAF73525.1| (AE002273) ABC transporter, ATP-binding protein [... 168 8e-41
gi|11499941 ABC transporter, ATP-binding protein [Archaeoglobus ... 166 2e-40
gb|AAF76373.1| (AC013428) unknown protein [Arabidopsis thaliana] 164 9e-40
pir||A72048 ABC transporter ATPase - Chlamydophila pneumoniae (s... 162 3e-39
pir||A71483 probable ABC transporter ATPase - Chlamydia trachoma... 160 2e-38
gb|AAK41206.1| ABC transporter [Sulfolobus solfataricus] 151 7e-36
pir||G72255 ABC transporter, ATP-binding protein - Thermotoga ma... 151 7e-36
pir||B71077 probable ABC transporter ATP-binding protein - Pyroc... 134 1e-30
gb|AAF19582.1|AC011708_25 (AC011708) putative ABC transporter [A... 123 2e-27
pir||E70337 ABC transporter - Aquifex aeolicus >gi|2983089|gb|AA... 117 1e-25
gi|11498564 branched-chain amino acid ABC transporter, ATP-bindi... 113 3e-24
sp|P45073|YHBG_HAEIN PROBABLE ABC TRANSPORTER ATP-BINDING PROTEI... 112 4e-24
gi|11498986 branched-chain amino acid ABC transporter, ATP-bindi... 110 1e-23
pir||H72356 amino acid ABC transporter, ATP-binding protein - Th... 109 2e-23
gi|11497837 branched-chain amino acid ABC transporter, ATP-bindi... 105 6e-22
pir||G72687 probable high-affinity branched-chain amino acid tra... 104 1e-21
pir||E81337 ABC-transporter ATP-binding protein Cj0669 [imported... 103 2e-21
gb|AAG37225.1|AF298223_3 (AF298223) glutamine ABC transporter, A... 102 3e-21
sp|P31220|YHBG_ECOLI PROBABLE ABC TRANSPORTER ATP-BINDING PROTEI... 101 7e-21
pir||E71024 probable transport protein - Pyrococcus horikoshii >... 101 9e-21
pir||G69043 cobalt transport ATP-binding protein O - Methanobact... 101 9e-21
sp|P33982|YHBG_AZOCA PROBABLE ABC TRANSPORTER ATP-BINDING PROTEI... 101 1e-20
pir||C65111 probable ABC transporter (ntrA/rpoN 5'region) - Esch... 101 1e-20
sp|P25885|YHBG_RHIME PROBABLE ABC TRANSPORTER ATP-BINDING PROTEI... 100 2e-20
pir||E82065 ABC transporter, ATP-binding protein VC2528 [importe... 100 2e-20
emb|CAA11111.1| (AJ223088) hypothetical protein [Pseudomonas stu... 100 2e-20
gi|11498429 branched-chain amino acid ABC transporter, ATP-bindi... 100 3e-20
gb|AAF81686.1|AF233069_9 (AF233069) unknown [Galdieria sulphuraria] 100 3e-20
sp|P24693|YHBG_THIFE PROBABLE ABC TRANSPORTER ATP-BINDING PROTEI... 99 5e-20
gi|11498996 iron (III) ABC transporter, ATP-binding protein (hem... 99 5e-20
gb|AAB20257.1| (S63858) orf 5' of rpoN [Rhizobium, NGR234, Pepti... 99 5e-20
pir||A71243 probable maltose/maltodextrin transport ATP-binding ... 99 6e-20
pir||H75161 ribose abc transporter, ATP-binding protein (rbsa) P... 99 6e-20
gi|11498288 glutamine ABC transporter, ATP-binding protein (glnQ... 98 8e-20
pir||B64458 high-affinity branched-chain amino acid transport AT... 98 8e-20
pir||B70483 ABC transporter - Aquifex aeolicus >gi|2984332|gb|AA... 96 3e-19
gb|AAA80299.1| (U23471) ABC-type permease homolog [Rhizobium leg... 96 5e-19
pir||D69627 cell-division ATP-binding protein ftsE - Bacillus su... 96 5e-19
gi|11497838 branched-chain amino acid ABC transporter, ATP-bindi... 95 7e-19
pir||F71654 ABC transporter ATP-binding protein (abcT2) RP508 - ... 95 7e-19
emb|CAB95741.1| (AJ276960) putative ABC transporter [Staphylococ... 95 7e-19
pir||F82683 ABC transporter ATP-binding protein XF1409 [imported... 95 7e-19
pir||C75077 iron (iii) abc transporter, ATP-binding protein (hem... 95 9e-19
pir||C75310 ABC transporter, ATP-binding protein - Deinococcus r... 95 9e-19
gb|AAK42946.1| ABC transporter, ATP binding protein (branched ch... 94 1e-18
pir||A75208 sugar transport ATP-binding protein. PAB2232 - Pyroc... 94 1e-18
pir||E83087 probable ATP-binding component of ABC transporter PA... 94 1e-18
pir||A64409 ferric enterobactin transport ATP-binding protein ho... 94 2e-18
pir||E71067 probable ferrichrome transport ATP-binding protein -... 94 2e-18
pir||F72604 probable high-affinity branched-chain amino acid tra... 94 2e-18
gb|AAF33771.1|AF219259_4 (AF219259) YhbG [Haemophilus ducreyi] 94 2e-18
pir||A70158 ABC transporter, ATP-binding protein homolog - Lyme ... 94 2e-18
pir||G64435 cobalt transport ATP-binding protein O homolog - Met... 93 3e-18
sp|Q58283|Y873_METJA HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 93 3e-18
sp|P07109|HISP_ECOLI HISTIDINE TRANSPORT ATP-BINDING PROTEIN HIS... 93 3e-18
pir||G72290 branched chain amino acid ABC transporter, ATP-bindi... 93 3e-18
pir||A27835 histidine transport protein hisP - Escherichia coli ... 92 4e-18
sp|P02915|HISP_SALTY HISTIDINE TRANSPORT ATP-BINDING PROTEIN HIS... 92 4e-18
pdb|1B0U|A Chain A, Atp-Binding Subunit Of The Histidine Permeas... 92 4e-18
pir||F81875 sulfate ABC transporter, ATP-binding protein NMA1097... 92 4e-18
sp|O34392|YTRE_BACSU HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 92 6e-18
gb|AAD41366.1|AF151698_3 (AF151698) GlnP/GlnQ homolog [Agrobacte... 92 6e-18
gb|AAB17558.1| (U72493) ATP binding protein [Chlamydia trachomatis] 92 8e-18
pir||G71486 probable ABC transporter ATPase - Chlamydia trachoma... 92 8e-18
pir||C72044 ABC transporter ATPase - Chlamydophila pneumoniae (s... 92 8e-18
pir||H72301 ABC transporter, ATP-binding protein - Thermotoga ma... 92 8e-18
pir||A72279 sugar ABC transporter, ATP-binding protein - Thermot... 92 8e-18
sp|P45092|ARTP_HAEIN ARGININE TRANSPORT ATP-BINDING PROTEIN ARTP... 91 1e-17
pir||D72485 probable high-affinity branched-chain amino acid tra... 91 1e-17
gb|AAF73520.1| (AE002271) ABC transporter, ATP-binding protein [... 91 1e-17
pir||G82707 ABC transporter ATP-binding protein XF1223 [imported... 91 1e-17
emb|CAC05750.1| (AL391751) putative peptide transport system ATP... 91 1e-17
emb|CAA67415.1| (X98917) orf4 [Methanopyrus kandleri] 91 1e-17
dbj|BAB06041.1| (AP001515) sugar ABC transporter (ATP-binding pr... 91 1e-17
sp|P36879|YADG_ECOLI HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 90 2e-17
gb|AAB08067.1| (U67179) ORF2 [Xanthomonas campestris] 90 2e-17
pir||B81147 sulfate ABC transporter, ATP-binding protein NMB0879... 90 2e-17
sp|O34900|YTMN_BACSU PROBABLE AMINO-ACID ABC TRANSPORTER ATP-BIN... 90 2e-17
gi|11498563 branched-chain amino acid ABC transporter, ATP-bindi... 90 2e-17
pir||E75108 daunorubicin resistance ATP-binding protein (drra-1)... 90 3e-17
pir||H81784 probable ABC transporter ATP-binding protein NMA2131... 90 3e-17
pir||F82303 ABC transporter, ATP-binding protein VC0589 [importe... 90 3e-17
pir||G83031 probable ATP-binding component of ABC transporter PA... 90 3e-17
dbj|BAB03966.1| (AP001507) ABC transporter (ATP-binding protein)... 89 4e-17
dbj|BAB04773.1| (AP001510) transposase (08)/ABC transporter (ATP... 89 4e-17
pir||C71081 probable resistance ATP-binding protein - Pyrococcus... 89 5e-17
pir||A72452 probable peptide transport ATP-binding protein APE22... 89 5e-17
pir||H75077 abc transporter, ATP-binding protein PAB1696 - Pyroc... 89 5e-17
dbj|BAA83955.1| (AB024563) YFIL [Bacillus halodurans] 89 5e-17
pir||C75612 phosphate ABC transporter, ATP-binding protein - Dei... 89 5e-17
pir||A70180 spermidine/putrescine ABC transporter, ATP-binding p... 89 7e-17
dbj|BAB03891.1| (AP001507) amino acid ABC transporter (ATP-bindi... 89 7e-17
gb|AAG32538.1| (AY005472) SalT [Streptococcus salivarius] 89 7e-17
gi|11499468 daunorubicin resistance ATP-binding protein (drrA) [... 89 7e-17
gi|10955064 motB [Agrobacterium tumefaciens] >gi|3064078|gb|AAC1... 88 9e-17
pir||H71066 probable ATP-binding transport protein - Pyrococcus ... 88 9e-17
pir||C81208 ABC transporter, ATP-binding protein NMB0356 [import... 88 9e-17
pir||A69095 cobalt transport ATP-binding protein O - Methanobact... 88 1e-16
pir||A48362 hypothetical protein 280 (rpoN 5' region) - Alcalige... 88 1e-16
sp|Q58762|YD67_METJA HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 87 1e-16
pir||H72342 ABC transporter, ATP-binding protein - Thermotoga ma... 87 1e-16
pir||C72576 probable glutamine transport ATP-binding protein APE... 87 1e-16
gb|AAF23272.1|AF101263_2 (AF121672) ABC transporter MreA [Staphy... 87 1e-16
dbj|BAB05817.1| (AP001514) ABC transporter (ATP-binding protein)... 87 1e-16
pir||D71179 probable sugar ABC transporter - Pyrococcus horikosh... 87 2e-16
pir||F72756 probable multiple sugar-binding transport ATP-bindin... 87 2e-16
pir||E81936 probable amino acid permease ATP-binding protein NMA... 87 2e-16
dbj|BAB06841.1| (AP001517) ABC transporter (ATP-binding protein)... 87 2e-16
gi|11498338 cobalt transport ATP-binding protein (cbiO-1) [Archa... 87 3e-16
pir||B70327 ABC transporter - Aquifex aeolicus >gi|2982983|gb|AA... 87 3e-16
pir||G81168 amino acid ABC transporter, ATP-binding protein NMB0... 87 3e-16
pir||F71849 amino acid ABC transporter, ATP-binding protein - He... 86 3e-16
pir||E72757 probable phosphate transport ATP-binding protein pst... 86 3e-16
pir||C64666 glutamine transport protein glnQ - Helicobacter pylo... 86 4e-16
gi|11498042 iron (III) ABC transporter, ATP-binding protein (hem... 86 4e-16
gb|AAK40809.1| Phosphate ABC transporter, ATP-binding protein [S... 85 6e-16
pir||S76552 hypothetical protein - Synechocystis sp. (strain PCC... 85 6e-16
pir||C71220 probable sugar-binding transport ATP-binding protein... 85 6e-16
pir||G71905 probable ABC transporter, ATP-binding protein - Heli... 85 6e-16
pir||G81022 ABC transporter, ATP-binding protein NMB1966 [import... 85 6e-16
pir||B81966 probable ABC transport ATP-binding protein NMA0485 [... 85 6e-16
pir||B83037 probable ATP-binding component of ABC transporter PA... 85 6e-16
pir||C69012 ABC transporter (ATP-binding, daunorubicin resistanc... 85 8e-16
gb|AAD45529.1|AF162655_1 (AF162655) choline transporter [Strepto... 85 8e-16
pir||D83194 polyamine transport protein PotA PA3607 [imported] -... 85 8e-16
pir||F83122 probable ATP-binding component of ABC transporter PA... 85 8e-16
dbj|BAB03967.1| (AP001507) ABC transporter (ATP-binding protein)... 85 8e-16
pir||E70485 ABC transporter - Aquifex aeolicus >gi|2984365|gb|AA... 85 1e-15
pir||B71234 probable transport protein - Pyrococcus horikoshii >... 85 1e-15
pir||G75142 abc transporter, ATP-binding protein PAB2147 - Pyroc... 85 1e-15
pir||G75539 branched-chain amino acid ABC transporter, ATP-bindi... 85 1e-15
pir||F82201 spermidine/putrescine ABC transporter, ATP-binding p... 85 1e-15
emb|CAC05961.1| (AL391763) ATP-binding protein [Streptomyces coe... 85 1e-15
sp|P55453|Y4FO_RHISN PUTATIVE ABC TRANSPORTER ATP-BINDING PROTEI... 84 1e-15
gi|10955092 moaD [Agrobacterium tumefaciens] >gi|11278927|pir||T... 84 1e-15
pir||B82393 ABC transporter, ATP-binding protein VCA0977 [import... 84 1e-15
sp|P44531|AFUC_HAEIN PUTATIVE FERRIC TRANSPORT ATP-BINDING PROTE... 84 2e-15
pir||C71237 probable transport-ATP binding protein - Pyrococcus ... 84 2e-15
dbj|BAB04537.1| (AP001509) bacitracin ABC transporter (ATP-bindi... 84 2e-15
gi|11499564 ABC transporter, ATP-binding protein [Archaeoglobus ... 83 3e-15
pir||T35757 probable branched chain amino acid transport ATP-bin... 83 3e-15
pir||H83240 probable ATP-binding component of ABC transporter PA... 83 4e-15
sp|P45171|POTA_HAEIN SPERMIDINE/PUTRESCINE TRANSPORT ATP-BINDING... 82 5e-15
pir||C64609 ABC transporter, ATP-binding protein - Helicobacter ... 82 5e-15
pir||D75187 probable maltose/maltodextrin transport ATP-binding ... 82 5e-15
pir||B83571 probable ATP-binding component of ABC transporter PA... 82 5e-15
pir||G71131 probable ATP-binding protein - Pyrococcus horikoshii... 82 7e-15
pir||G81344 ABC transport system ATP-binding protein Cj0732 [imp... 82 7e-15
pir||G71192 probable cobalt transport ATP-binding protein - Pyro... 82 9e-15
emb|CAC16446.1| (AL450165) putative oligopeptide ABC transporter... 82 9e-15
pir||A72261 spermidine/putrescine ABC transporter, ATP-binding p... 81 1e-14
pir||A82429 iron(III) ABC transporter, ATP-binding protein VCA06... 81 1e-14
pir||T36344 probable ABC-type transport system ATP-binding prote... 81 1e-14
dbj|BAB07815.1| (AB036417) CysA protein [Acetabularia acetabulum] 81 1e-14
pir||C69223 anion permease - Methanobacterium thermoautotrophicu... 80 2e-14
pir||E72378 sugar ABC transporter, ATP-binding protein - Thermot... 80 2e-14
pir||F64751 probable ABC-type transport protein b0262 - Escheric... 80 3e-14
sp|P37009|AFUC_ECOLI PUTATIVE FERRIC TRANSPORT ATP-BINDING PROTE... 80 3e-14
pir||T35675 probable ABC-transport system ATP binding protein - ... 80 3e-14
pir||H75151 abc transporter, ATP-binding protein PAB0249 - Pyroc... 80 3e-14
sp|Q57554|Y089_METJA HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 80 3e-14
gb|AAC27495.1| (AF077856) PotA [Actinobacillus actinomycetemcomi... 80 3e-14
pir||G75200 cobalt abc transporter, ATP-binding protein (cbio) P... 80 3e-14
pir||A83621 probable ATP-binding component of ABC transporter PA... 80 3e-14
emb|CAC08315.1| (AL392149) putative ABC transport system ATP-bin... 80 3e-14
sp|P23858|POTA_ECOLI SPERMIDINE/PUTRESCINE TRANSPORT ATP-BINDING... 79 4e-14
pir||S74440 iron(III) dicitrate transport system permease protei... 79 4e-14
pir||H70610 probable ABC-typetransmembrane transport portein - M... 79 6e-14
pir||E75412 spermidine/putrescine ABC transporter, ATP-binding p... 79 6e-14
pir||T46950 probable ATPase component of 2-aminoethylphosphonate... 78 1e-13
pir||G75203 abc transporter, ATP-binding protein PAB0103 - Pyroc... 78 1e-13
pir||H82224 probable vitamin B12 ABC transporter, ATP-binding pr... 78 1e-13
sp|P77795|YDCT_ECOLI HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 78 1e-13
pir||T03550 ATP-binding transport protein polk - Rhodobacter cap... 78 1e-13
emb|CAB65650.1| (AJ252160) putative ABC-transporter ATP-binding ... 77 2e-13
dbj|BAA77930.1| (D83536) Hypothetical ABC transporter ATP-bindin... 77 2e-13
pir||F82198 probable toxin secretion transporter VC1446 [importe... 77 2e-13
gb|AAG10493.1|AF279106_55 (AF279106) predicted ABC transporter A... 77 2e-13
gb|AAG20488.1| (AE005121) sulfate transport system ATP-binding p... 77 2e-13
emb|CAB70952.1| (AJ271599) putative ATP-binding subunit [Anabaen... 76 3e-13
pir||B71030 probable ATP-binding transport protein - Pyrococcus ... 76 5e-13
pir||H71008 probable ATP-binding transport protein - Pyrococcus ... 75 6e-13
gb|AAF28101.1|AF148682_1 (AF148682) oligopeptide permease F prot... 75 6e-13
gi|11499200 spermidine/putrescine ABC transporter, ATP-binding p... 75 1e-12
pir||A75184 ATP-binding transport protein PAB0434 - Pyrococcus a... 75 1e-12
gb|AAA20681.1| (L16958) Mdl1p [Saccharomyces cerevisiae] 73 2e-12
gi|6323217 ATP-binding cassette (ABC) transporter family member;... 73 2e-12
gb|AAB95372.1| (U75349) putative ABC transporter BitD [Brachyspi... 73 2e-12
pir||E72364 ABC transporter, ATP-binding protein - Thermotoga ma... 73 2e-12
pir||D72484 probable ATP-binding protein APE2516 - Aeropyrum per... 73 2e-12
gb|AAK43114.1| ABC transporter, ATP binding protein [Sulfolobus ... 73 3e-12
pir||A75083 ATP-binding transport protein PAB1668 - Pyrococcus a... 73 3e-12
dbj|BAB07160.1| (AP001518) L-arabinose ABC transporter (ATP-bind... 73 3e-12
gb|AAB88581.1| (M93437) CycB [Thermus thermophilus] 73 4e-12
pir||G75169 abc transporter ATP-binding protein PAB0350 - Pyroco... 73 4e-12
dbj|BAA85884.1| (AB033988) unnamed protein product [Shewanella v... 73 4e-12
pir||G81409 probable phosphate transport ATP-binding protein Cj0... 73 4e-12
gb|AAK42548.1| ABC transporter, ATP binding protein [Sulfolobus ... 72 7e-12
gi|10955070 agtA [Agrobacterium tumefaciens] >gi|6689864|gb|AAF2... 72 7e-12
pir||H82440 ABC transporter, ATP-binding protein VCA0602 [import... 72 7e-12
pir||H72690 probable spermidine/putrescine transport ATP-binding... 71 1e-11
sp|P39326|YTFR_ECOLI HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 71 1e-11
pir||D70184 probable ribose/galactose ABC transporter mglA - Lym... 71 1e-11
pir||C81179 spermidine/putrescine ABC transporter, ATP-binding p... 71 1e-11
gb|AAF50837.1| (AE003568) CG1718 gene product [Drosophila melano... 71 1e-11
gb|AAB61163.1| (U77778) putative ABC transporter subunit [Staphy... 71 1e-11
pir||D81303 branched-chain amino-acid ABC transport system ATP-b... 71 1e-11
sp|P17328|PROV_SALTY GLYCINE BETAINE/L-PROLINE TRANSPORT ATP-BIN... 70 3e-11
pir||T43920 YfuC protein [imported] - Yersinia enterocolitica >g... 70 3e-11
pir||E71296 probable spermidine/putrescine ABC transporter, ATP-... 70 3e-11
pir||G81926 probable polyamine permease ATP-binding protein NMA0... 70 3e-11
pir||H83117 probable ATP-binding component of ABC transporter PA... 70 3e-11
pir||G69815 ABC transporter (ATP-binding protein) homolog ygaD -... 69 4e-11
emb|CAB69682.1| (AL137165) putative branched-chain amino acid tr... 69 4e-11
gb|AAG32068.1|AF317790_1 (AF317790) ATP-binding transporter AviA... 69 4e-11
sp|P14175|PROV_ECOLI GLYCINE BETAINE/L-PROLINE TRANSPORT ATP-BIN... 69 5e-11
gb|AAK42130.1| Antibiotic ABC transporter ATP binding protein [S... 69 6e-11
pir||C69819 ABC transporter (ATP-binding protein) homolog yhaQ -... 69 6e-11
>pir||E75120 hypothetical protein PAB1855 - Pyrococcus abyssi (strain Orsay)
>gi|5458189|emb|CAB49678.1| (AJ248285) hypothetical
protein [Pyrococcus abyssi]
Length = 247
Score = 490 bits (1249), Expect = e-138
Identities = 247/247 (100%), Positives = 247/247 (100%)
Query: 1 MLKIEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKI 60
MLKIEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKI
Sbjct: 1 MLKIEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKI 60
Query: 61 IFNGEDITSSSPDERARKGILLAFQVPPEIEGVRILDFLIQVLTEIKGMKPEEAYDVVLN 120
IFNGEDITSSSPDERARKGILLAFQVPPEIEGVRILDFLIQVLTEIKGMKPEEAYDVVLN
Sbjct: 61 IFNGEDITSSSPDERARKGILLAFQVPPEIEGVRILDFLIQVLTEIKGMKPEEAYDVVLN 120
Query: 121 KAKELWFDDKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSVISR 180
KAKELWFDDKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSVISR
Sbjct: 121 KAKELWFDDKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSVISR 180
Query: 181 KIEELHNRGVSIILITHYGRIFGHIDKEKLKVHVMKDGKIVKSGGSEIIDMIEREGFKAI 240
KIEELHNRGVSIILITHYGRIFGHIDKEKLKVHVMKDGKIVKSGGSEIIDMIEREGFKAI
Sbjct: 181 KIEELHNRGVSIILITHYGRIFGHIDKEKLKVHVMKDGKIVKSGGSEIIDMIEREGFKAI 240
Query: 241 FGGENVE 247
FGGENVE
Sbjct: 241 FGGENVE 247
>pir||B71011 probable ATP-dependent transporter YCF16 - Pyrococcus horikoshii
>gi|3257807|dbj|BAA30490.1| (AP000006) 247aa long
hypothetical ATP-dependent transporter YCF16 [Pyrococcus
horikoshii]
Length = 247
Score = 399 bits (1013), Expect = e-110
Identities = 192/247 (77%), Positives = 221/247 (88%)
Query: 1 MLKIEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKI 60
MLKI DLHVE GREIL+G+NL VN+GEFHVIMGPNGSGKSTLALT+AGHP YKVTKG I
Sbjct: 1 MLKIVDLHVEAGGREILKGVNLTVNEGEFHVIMGPNGSGKSTLALTLAGHPNYKVTKGGI 60
Query: 61 IFNGEDITSSSPDERARKGILLAFQVPPEIEGVRILDFLIQVLTEIKGMKPEEAYDVVLN 120
F ++IT+ +PDERA+ GILLAFQVPPEI+GVRI+DFL Q L+EIK + EAY++++
Sbjct: 61 FFEDKEITNLTPDERAKMGILLAFQVPPEIQGVRIIDFLTQTLSEIKNLDASEAYNIIIE 120
Query: 121 KAKELWFDDKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSVISR 180
KAKELWF + D+RR++NVGFSGGERKRLELLQALLLEPKLL+LDEPDSGVDVDSLSVISR
Sbjct: 121 KAKELWFREDDLRRYINVGFSGGERKRLELLQALLLEPKLLILDEPDSGVDVDSLSVISR 180
Query: 181 KIEELHNRGVSIILITHYGRIFGHIDKEKLKVHVMKDGKIVKSGGSEIIDMIEREGFKAI 240
KIEELH +GVSIILITHYGRIFGHIDKEKLKV++M+DGKIV GGSE+I MIE +GFKAI
Sbjct: 181 KIEELHKKGVSIILITHYGRIFGHIDKEKLKVNIMRDGKIVMRGGSELISMIEEKGFKAI 240
Query: 241 FGGENVE 247
FGG+N E
Sbjct: 241 FGGDNDE 247
>pir||T44565 probable ATP-dependent transport protein [imported] - Pyrococcus
furiosus >gi|6066238|gb|AAF03223.1|AF156097_3 (AF156097)
hypothetical ATP-dependent transporter [Pyrococcus
furiosus]
Length = 247
Score = 293 bits (743), Expect = 1e-78
Identities = 143/247 (57%), Positives = 191/247 (76%), Gaps = 4/247 (1%)
Query: 1 MLKIEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKI 60
MLK+E+L V+VE +EIL+GINL + + E HV+MGPNGSGKSTLALTIAGHPKYKV +G I
Sbjct: 5 MLKVENLWVKVEDKEILKGINLNIGENELHVVMGPNGSGKSTLALTIAGHPKYKVIQGSI 64
Query: 61 IFNGEDITSSSPDERARKGILLAFQVPPEIEGVRILDFLIQVLTEIKGMKPEEAYDVVLN 120
+F GE+ITS P+ER +KGI L+FQ P E++GV+I+ FL ++L +KGM +AY+ +
Sbjct: 65 LFEGEEITSLPPEERVKKGIFLSFQHPVEVDGVKIIHFLQRILKNLKGMDEIKAYEAIYT 124
Query: 121 KAKELWFDDKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSVISR 180
KEL D+ + RF+NVGFSGGERK+LE+LQA L+EPKLL+LDEPDSGVDVDSL I++
Sbjct: 125 AIKELGLDESILTRFLNVGFSGGERKKLEMLQAYLVEPKLLILDEPDSGVDVDSLKTIAK 184
Query: 181 KIEELHNRGVSIILITHYGRIFGHIDKEKLKVHVMKDGKIVKSGGSEIIDMIEREGFKAI 240
I L+ RG S++LITHYGRI +++ KVHV+K+GKIV SG +++ +IE G+ A+
Sbjct: 185 IIRRLYERGTSVLLITHYGRILEYLN--PTKVHVIKNGKIVASGSIDLVKIIEERGYSAV 242
Query: 241 FGGENVE 247
G+N E
Sbjct: 243 --GDNEE 247
>sp|P80866|V296_BACSU VEGETATIVE PROTEIN 296 (VEG296) >gi|7445790|pir||H70019 ABC
transporter (ATP-binding protein) homolog yurY -
Bacillus subtilis >gi|2635767|emb|CAB15260.1| (Z99120)
similar to ABC transporter (ATP-binding protein)
[Bacillus subtilis]
Length = 261
Score = 226 bits (571), Expect = 2e-58
Identities = 111/240 (46%), Positives = 160/240 (66%), Gaps = 6/240 (2%)
Query: 2 LKIEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKII 61
L I+DLHVE+EG+EIL+G+NL + GEFH +MGPNG+GKSTL+ I GHPKY+VTKG I
Sbjct: 6 LTIKDLHVEIEGKEILKGVNLEIKGGEFHAVMGPNGTGKSTLSAAIMGHPKYEVTKGSIT 65
Query: 62 FNGEDITSSSPDERARKGILLAFQVPPEIEGVRILDFLIQVLTEIKGMKPEEAYDVVLNK 121
+G+D+ DERA+ G+ LA Q P EI GV DFL + + E + + K
Sbjct: 66 LDGKDVLEMEVDERAQAGLFLAMQYPSEISGVTNADFLRSAINARREEGDEISLMKFIRK 125
Query: 122 AKE----LWFDDKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSV 177
E L D + +R++N GFSGGE+KR E+LQ +++EPK+ +LDE DSG+D+D+L V
Sbjct: 126 MDENMEFLEMDPEMAQRYLNEGFSGGEKKRNEILQLMMIEPKIAILDEIDSGLDIDALKV 185
Query: 178 ISRKIEELHNRGVSIILITHYGRIFGHIDKEKLKVHVMKDGKIVKSGGSEIIDMIEREGF 237
+S+ I ++ + ++ITHY R+ +I + VHVM G++VKSGG+E+ +E EG+
Sbjct: 186 VSKGINKMRSENFGCLMITHYQRLLNYITPD--VVHVMMQGRVVKSGGAELAQRLEAEGY 243
>pir||A72260 ABC transporter, ATP-binding protein - Thermotoga maritima (strain
MSB8) >gi|4981930|gb|AAD36439.1|AE001791_1 (AE001791)
ABC transporter, ATP-binding protein [Thermotoga
maritima]
Length = 246
Score = 226 bits (571), Expect = 2e-58
Identities = 119/241 (49%), Positives = 164/241 (67%), Gaps = 5/241 (2%)
Query: 1 MLKIEDLHVEV--EGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKG 58
ML+I +LH ++ E +EIL+G+NL + GE HV+MGPNGSGKSTLA I G+P+Y VT+G
Sbjct: 1 MLRIVNLHAKLRDEDKEILKGVNLEIEKGEVHVLMGPNGSGKSTLANVIMGNPRYIVTEG 60
Query: 59 KIIFNGEDITSSSPDERARKGILLAFQVPPEIEGVRILDFLIQVLTEIKGMKPE--EAYD 116
I+F G I P+ERA+ GI++ FQ P E+EGV++ FLI I G E
Sbjct: 61 DIVFEGNSIKDLPPNERAKLGIMMTFQNPYEVEGVKLSQFLITAHRRIHGEDKNYLELRK 120
Query: 117 VVLNKAKELWFDDKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLS 176
+ A++L D + R++NVGFSGGE+KR E+LQ+L L PKLL+LDE DSG+DVD+L
Sbjct: 121 ELEETAEKLGLDKDFLERYLNVGFSGGEKKRSEILQSLFLRPKLLILDEIDSGLDVDALR 180
Query: 177 VISRKIEELHNRGVSIILITHYGRIFGHIDKEKLKVHVMKDGKIVKSGGSEIIDMIEREG 236
+I+ I L+ GV++++ITHY R+ H+ K KVHV DG+IV SGG E+ D IE +G
Sbjct: 181 LIANLIARLNEEGVTLLIITHYKRLLDHL-KRIDKVHVYVDGRIVTSGGPELADEIEEKG 239
Query: 237 F 237
+
Sbjct: 240 Y 240
>dbj|BAB07190.1| (AP001518) ABC transporter (ATP-binding protein) [Bacillus
halodurans]
Length = 263
Score = 221 bits (558), Expect = 5e-57
Identities = 116/243 (47%), Positives = 154/243 (62%), Gaps = 12/243 (4%)
Query: 2 LKIEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKII 61
LKIE+LHV +EG+EIL+ +L VN GE H IMGPNG+GKSTLA I GHPKY++T G +
Sbjct: 6 LKIENLHVTIEGKEILKDFSLEVNGGEIHAIMGPNGTGKSTLASAIMGHPKYEITSGSVT 65
Query: 62 FNGEDITSSSPDERARKGILLAFQVPPEIEGVRILDFLIQVLT-------EIKGMKPEEA 114
NGED+ DERA+ G+ LA Q P EI GV DFL + EI MK
Sbjct: 66 LNGEDVLEMEVDERAKAGMFLAMQYPSEISGVTNSDFLRSAINAQREEGDEISLMKFIRQ 125
Query: 115 YDVVLNKAKELWFDDKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDS 174
D K L D+ R++N GFSGGE+KR E+LQ ++LEPK+ +LDE DSG+D+D+
Sbjct: 126 LD---EKMDLLDMDESFAHRYLNEGFSGGEKKRNEILQLMMLEPKIAILDEIDSGLDIDA 182
Query: 175 LSVISRKIEELHNRGVSIILITHYGRIFGHIDKEKLKVHVMKDGKIVKSGGSEIIDMIER 234
L V+S+ + + ++ITHY R+ +I + KVHVM G+IVKSGG E+ +E
Sbjct: 183 LKVVSQGVNAMRGSEFGCLIITHYQRLLNYITPD--KVHVMMQGRIVKSGGPELAQRLEA 240
Query: 235 EGF 237
EG+
Sbjct: 241 EGY 243
>pir||T35994 probable ABC-type transport system ATP-binding chain - Streptomyces
coelicolor >gi|5459389|emb|CAB50747.1| (AL096839)
putative ABC transporter ATP-binding subunit
[Streptomyces coelicolor A3(2)]
Length = 254
Score = 217 bits (546), Expect = 1e-55
Identities = 119/249 (47%), Positives = 160/249 (63%), Gaps = 9/249 (3%)
Query: 2 LKIEDLHVEVEG----REILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTK 57
L+I DLHV VE +EIL+G++L V GE H IMGPNGSGKSTLA ++AGHPKY +T
Sbjct: 4 LEIRDLHVTVEADNATKEILKGVDLTVKQGETHAIMGPNGSGKSTLAYSLAGHPKYTITG 63
Query: 58 GKIIFNGEDITSSSPDERARKGILLAFQVPPEIEGVRILDFLIQVLTEIKGMKPEEAYDV 117
G + +GED+ S DERAR G+ LA Q P E+ GV + +FL T ++G P+ + V
Sbjct: 64 GTVTLDGEDVLEMSVDERARAGLFLAMQYPVEVPGVSVSNFLRTSATAVRGEAPKLRHWV 123
Query: 118 --VLNKAKELWFDDKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSL 175
V + L D R VN GFSGGE+KR E+LQ LL+PK+ +LDE DSG+DVD+L
Sbjct: 124 KEVKEAMERLNMDPAFAERNVNEGFSGGEKKRHEILQLELLKPKVAILDETDSGLDVDAL 183
Query: 176 SVISRKIEELHNRG-VSIILITHYGRIFGHIDKEKLKVHVMKDGKIVKSGGSEIIDMIER 234
V+S + + G V +LITHY RI +I + VHV +G+I +SGG+E+ D +E
Sbjct: 184 RVVSEGVNRVRETGEVGTLLITHYTRILRYIKPD--YVHVFANGRIAESGGAELADKLEA 241
Query: 235 EGFKAIFGG 243
EG++A G
Sbjct: 242 EGYEAYTKG 250
>gi|11467361 ABC transporter subunit [Cyanophora paradoxa]
>gi|1351834|sp|P48255|ABCX_CYAPA PROBABLE ATP-DEPENDENT
TRANSPORTER YCF16 >gi|7445843|pir||T06906 probable
ABC-type transport protein - Cyanophora paradoxa
cyanelle >gi|1016162|gb|AAA81249.1| (U30821) ABC
transporter subunit [Cyanophora paradoxa]
Length = 259
Score = 216 bits (545), Expect = 2e-55
Identities = 108/243 (44%), Positives = 160/243 (65%), Gaps = 8/243 (3%)
Query: 1 MLKIEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKI 60
+L++++L +V+G EIL+G+NL +N GE H IMGPNGSGKST + +AGHP Y+VT G+I
Sbjct: 8 ILEVKNLKAQVDGTEILKGVNLTINSGEIHAIMGPNGSGKSTFSKILAGHPAYQVTGGEI 67
Query: 61 IFNGEDITSSSPDERARKGILLAFQVPPEIEGVRILDFLIQVLTE------IKGMKPEEA 114
+F +++ P+ERAR G+ LAFQ P EI GV +DFL + + P
Sbjct: 68 LFKNKNLLELEPEERARAGVFLAFQYPIEIAGVSNIDFLRLAYNNRRKEEGLTELDPLTF 127
Query: 115 YDVVLNKAKELWFDDKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDS 174
Y +V K + D + R VN GFSGGE+KR E+LQ LL P L +LDE DSG+D+D+
Sbjct: 128 YSIVKEKLNVVKMDPHFLNRNVNEGFSGGEKKRNEILQMALLNPSLAILDETDSGLDIDA 187
Query: 175 LSVISRKIEELHNRGVSIILITHYGRIFGHIDKEKLKVHVMKDGKIVKSGGSEIIDMIER 234
L +++ + +L N+ SIILITHY R+ +I + +HVM++G+I+K+GG+E+ +E
Sbjct: 188 LRIVAEGVNQLSNKENSIILITHYQRLLDYIVPD--YIHVMQNGRILKTGGAELAKELEI 245
Query: 235 EGF 237
+G+
Sbjct: 246 KGY 248
>pir||F75313 ABC transporter, ATP-binding protein, Ycf16 family - Deinococcus
radiodurans (strain R1)
>gi|6459903|gb|AAF11656.1|AE002046_2 (AE002046) ABC
transporter, ATP-binding protein, Ycf16 family
[Deinococcus radiodurans]
Length = 252
Score = 215 bits (541), Expect = 5e-55
Identities = 107/240 (44%), Positives = 159/240 (65%), Gaps = 6/240 (2%)
Query: 2 LKIEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKII 61
L+I +LH V +EILRGINL V GE H IMGPNG+GKSTLA I G P+Y VT+G+++
Sbjct: 6 LEIRNLHATVGDKEILRGINLVVPRGELHAIMGPNGNGKSTLAKVIVGDPEYTVTQGEVL 65
Query: 62 FNGEDITSSSPDERARKGILLAFQVPPEIEGVRILDFLIQVLTEIKGMKPE----EAYDV 117
+G++I PDERAR G+ LAFQ P EI GV I +FL + KG E E Y
Sbjct: 66 VDGQNILEMEPDERARLGVFLAFQYPVEIPGVTIANFLRLAMQARKGEGEEVSFTEFYGK 125
Query: 118 VLNKAKELWFDDKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSV 177
+ + K L +D+ + R++N G SGGE+KR E+LQ L+LEP +++DE DSG+DVD+L +
Sbjct: 126 LQSALKTLEWDESIVERYLNEGMSGGEKKRNEILQMLMLEPNYIIMDETDSGLDVDALKI 185
Query: 178 ISRKIEELHNRGVSIILITHYGRIFGHIDKEKLKVHVMKDGKIVKSGGSEIIDMIEREGF 237
+++ + + + ++ITHY R+ +I + KVH++ +G++V+SGG E+ ++ EG+
Sbjct: 186 VAKGVNSMRGENLGGLIITHYQRLLDYITPD--KVHIIVNGRVVQSGGPELAKKLDTEGY 243
>gi|11465707 hypothetical chloroplast ORF 16. [Porphyra purpurea]
>gi|1703045|sp|P51241|ABCX_PORPU PROBABLE ATP-DEPENDENT
TRANSPORTER YCF16 >gi|2147506|pir||S73162 hypothetical
protein 16 - red alga (Porphyra purpurea) chloroplast
>gi|1276707|gb|AAC08127.1| (U38804) hypothetical
chloroplast ORF 16. [Porphyra purpurea]
Length = 251
Score = 210 bits (529), Expect = 1e-53
Identities = 113/243 (46%), Positives = 149/243 (60%), Gaps = 8/243 (3%)
Query: 1 MLKIEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKI 60
+L+I+DLH V IL+G+NL++ GE H IMGPNGSGKSTL+ IAGHP Y + G I
Sbjct: 5 ILEIKDLHASVNDVPILKGVNLSIKPGEIHAIMGPNGSGKSTLSKVIAGHPAYSLLNGDI 64
Query: 61 IFNGEDITSSSPDERARKGILLAFQVPPEIEGVRILDFLIQVLT------EIKGMKPEEA 114
+F G I PDERAR GI LAFQ P EI GV DFL L E+ + P E
Sbjct: 65 LFYGRSILKMEPDERARAGIFLAFQYPVEIPGVSNADFLRIALNARRKFRELPELSPLEF 124
Query: 115 YDVVLNKAKELWFDDKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDS 174
+ ++ K + + + R VN GFSGGE+KR E+LQ LLE L +LDE DSG+D+D+
Sbjct: 125 FQLITEKINLVGMKESFLSRNVNEGFSGGEKKRNEILQMALLESNLSILDETDSGLDIDA 184
Query: 175 LSVISRKIEELHNRGVSIILITHYGRIFGHIDKEKLKVHVMKDGKIVKSGGSEIIDMIER 234
L +I++ I L SI+LITHY R+ +I VH+M DGKIVK+G + +E+
Sbjct: 185 LKIIAQGINTLATSTNSIVLITHYQRLLDYIIPN--FVHIMSDGKIVKTGNVNLAQDLEK 242
Query: 235 EGF 237
G+
Sbjct: 243 HGY 245
>pir||B70872 probable ABC-type transporter ATP-binding protein - Mycobacterium
tuberculosis (strain H37RV) >gi|2791397|emb|CAA15993.1|
(AL021184) hypothetical protein Rv1463 [Mycobacterium
tuberculosis]
Length = 266
Score = 206 bits (520), Expect = 1e-52
Identities = 119/247 (48%), Positives = 156/247 (62%), Gaps = 12/247 (4%)
Query: 1 MLKIEDLHVEVEGRE-------ILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKY 53
+L+I+DLHV VE ILRG++L V GE H +MGPNGSGKSTL+ IAGHPKY
Sbjct: 3 ILEIKDLHVSVENPAEADHEIPILRGVDLTVKSGETHALMGPNGSGKSTLSYAIAGHPKY 62
Query: 54 KVTKGKIIFNGEDITSSSPDERARKGILLAFQVPPEIEGVRILDFLIQVLTEIKGMKPEE 113
VT G I +G D+ + S DERAR G+ LA Q P E+ GV + +FL T I+G P+
Sbjct: 63 HVTSGTITLDGADVLAMSIDERARAGLFLAMQYPVEVPGVSMSNFLRSAATAIRGEPPKL 122
Query: 114 AYDVVLNKA--KELWFDDKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVD 171
+ V KA L D R VN GFSGGE+KR E+LQ LL+PK+ +LDE DSG+D
Sbjct: 123 RHWVKEVKAAMAALDIDPAFAERSVNEGFSGGEKKRHEILQLELLKPKIAILDETDSGLD 182
Query: 172 VDSLSVISRKIEE-LHNRGVSIILITHYGRIFGHIDKEKLKVHVMKDGKIVKSGGSEIID 230
VD+L V+S + ++ I+LITHY RI +I E VHV G+IV+SGGSE+ D
Sbjct: 183 VDALRVVSEGVNRYAESQHGGILLITHYTRILRYIHPE--YVHVFVGGRIVESGGSELAD 240
Query: 231 MIEREGF 237
+++ G+
Sbjct: 241 ELDQNGY 247
>sp|P77499|YNHD_ECOLI PROBABLE ATP-DEPENDENT TRANSPORTER YNHD >gi|7445632|pir||B64926
probable ABC-type transport protein ynhD - Escherichia
coli >gi|1742764|dbj|BAA15455.1| (D90811) Multidrug
resistance protein 1 (P-glycoprotein 1). [Escherichia
coli] >gi|1742771|dbj|BAA15461.1| (D90812) Multidrug
resistance protein 1 (P-glycoprotein 1). [Escherichia
coli] >gi|1787972|gb|AAC74752.1| (AE000263) putative
ATP-binding component of a transport system [Escherichia
coli K12]
Length = 248
Score = 206 bits (519), Expect = 2e-52
Identities = 109/243 (44%), Positives = 157/243 (63%), Gaps = 8/243 (3%)
Query: 1 MLKIEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKI 60
ML I+DLHV VE + ILRG++L V+ GE H IMGPNGSGKSTL+ T+AG Y+VT G +
Sbjct: 1 MLSIKDLHVSVEDKAILRGLSLDVHPGEVHAIMGPNGSGKSTLSATLAGREDYEVTGGTV 60
Query: 61 IFNGEDITSSSPDERARKGILLAFQVPPEIEGVRILDFLIQVLTEIKGMKPEEA------ 114
F G+D+ + SP++RA +GI +AFQ P EI GV FL L ++ + +E
Sbjct: 61 EFKGKDLLALSPEDRAGEGIFMAFQYPVEIPGVSNQFFLQTALNAVRSYRGQETLDRFDF 120
Query: 115 YDVVLNKAKELWFDDKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDS 174
D++ K L + + R VNVGFSGGE+KR ++LQ +LEP+L +LDE DSG+D+D+
Sbjct: 121 QDLMEEKIALLKMPEDLLTRSVNVGFSGGEKKRNDILQMAVLEPELCILDESDSGLDIDA 180
Query: 175 LSVISRKIEELHNRGVSIILITHYGRIFGHIDKEKLKVHVMKDGKIVKSGGSEIIDMIER 234
L V++ + L + S I++THY RI +I + VHV+ G+IVKSG ++ +E
Sbjct: 181 LKVVADGVNSLRDGKRSFIIVTHYQRILDYIKPD--YVHVLYQGRIVKSGDFTLVKQLEE 238
Query: 235 EGF 237
+G+
Sbjct: 239 QGY 241
>emb|CAC11348.1| (AL445063) FERRIC TRANSPORT ATP-BINDING PROTEIN AFUC related
protein [Thermoplasma acidophilum]
Length = 246
Score = 203 bits (511), Expect = 2e-51
Identities = 104/243 (42%), Positives = 158/243 (64%), Gaps = 11/243 (4%)
Query: 1 MLKIEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKI 60
+L+I +L VE ++IL+ +NL + GE H +MGPNG+GKSTL + GHP YK+T G+I
Sbjct: 2 ILEIRNLSASVEDKQILKDVNLKIGGGEIHALMGPNGAGKSTLGNVLIGHPDYKITGGQI 61
Query: 61 IFNGEDITSSSPDERARKGILLAFQVPPEIEGVRILDFLIQVLTEIKGMKPEEAYDV--- 117
I +G+DIT ++P+ERAR G+ LAFQ P +EGVRI FL + + P+E +
Sbjct: 62 ILDGKDITYATPEERARAGLFLAFQSPVAVEGVRISTFLRIAYSH---LHPDEKIVISEF 118
Query: 118 ---VLNKAKELWFDDKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDS 174
+ K + D+ + R VN GFSGGERKR E+LQ L+L+PK+++LDE DSG+DVD+
Sbjct: 119 NKRIKEAMKTVGLDESFISRSVNDGFSGGERKRFEILQMLILKPKMIILDEIDSGLDVDA 178
Query: 175 LSVISRKIEELHNRGVSIILITHYGRIFGHIDKEKLKVHVMKDGKIVKSGGSEIIDMIER 234
L +++ ++++ ++ V ++ITHY RI I+ + VHV+ +G I +G + D IE
Sbjct: 179 LRMVAEQLKKYFSKDVGYLIITHYQRILKDIEPQ--FVHVLVNGTIAINGDKSLSDKIEE 236
Query: 235 EGF 237
G+
Sbjct: 237 NGY 239
>emb|CAC17126.1| (AJ301654) SufC protein [Pectobacterium chrysanthemi]
Length = 248
Score = 202 bits (509), Expect = 3e-51
Identities = 107/243 (44%), Positives = 155/243 (63%), Gaps = 8/243 (3%)
Query: 1 MLKIEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKI 60
ML IE+L+V VE + I+ G+NL VN GE H IMGPNGSGKSTL+ T+AG Y+V G +
Sbjct: 1 MLTIENLNVSVEDKPIINGLNLQVNPGEVHAIMGPNGSGKSTLSATLAGREDYEVIGGSL 60
Query: 61 IFNGEDITSSSPDERARKGILLAFQVPPEIEGVRILDFLIQVLTEIKGMKPE------EA 114
F G+D+ SP+ERA +GI +AFQ P EI GV FL L ++ + + +
Sbjct: 61 RFKGKDLLELSPEERAGEGIFMAFQYPVEIPGVSNRFFLQTALNAVRAYRQQPTLDRFDF 120
Query: 115 YDVVLNKAKELWFDDKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDS 174
D + +K + L D + R VNVGFSGGE+KR ++LQ +LEP+L +LDE DSG+D+D+
Sbjct: 121 EDFIDDKIRLLNMPDDLLTRSVNVGFSGGEKKRNDILQMAVLEPELCILDETDSGLDIDA 180
Query: 175 LSVISRKIEELHNRGVSIILITHYGRIFGHIDKEKLKVHVMKDGKIVKSGGSEIIDMIER 234
L ++S + L + + I++THY RI +I + VHV+ G+IVKSG ++ +E
Sbjct: 181 LKIVSGGVNALRDGKRAFIIVTHYQRILDYIRPD--YVHVLYQGRIVKSGDFSLVKQLEE 238
Query: 235 EGF 237
+G+
Sbjct: 239 QGY 241
>gb|AAA87431.1| (U19364) unknown; putative transport protein of the ABC family
[Methanobacterium thermoautotrophicum]
Length = 251
Score = 200 bits (504), Expect = 1e-50
Identities = 113/248 (45%), Positives = 162/248 (64%), Gaps = 17/248 (6%)
Query: 1 MLKIEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKI 60
+L+I DL VEV GR++L+ I+L +++GE HV++GPNGSGKSTL +TI G PKY+VT G+I
Sbjct: 2 LLEITDLAVEVSGRQVLKDIDLYIDEGETHVLLGPNGSGKSTLFMTILGFPKYRVTGGQI 61
Query: 61 IFNGEDITSSSPDERARKGILLAFQVPPEIEGVRILDFL--IQVLTEIKGMKPEEAYDVV 118
IF GEDIT S ER R GI ++FQ PP I GV+++D L LT + PE +
Sbjct: 62 IFKGEDITELSTTERVRMGIGVSFQNPPAIRGVKLMDLLKVESGLTTEDELTPE-----L 116
Query: 119 LNKAKELWFDDKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSVI 178
+ A+++ FD+ + R VN+GFSGGE KR E+LQ L +P ++ DEPDSGVD++++ ++
Sbjct: 117 IELARKMKFDESFLERDVNLGFSGGEVKRSEILQLLAQKPDFIMFDEPDSGVDIENVELL 176
Query: 179 SRKIEELHN-------RGVSIILITHYGRIFGHIDKEKLKVHVMKDGKIVKSGG-SEIID 230
+ +I L + R S +LITH G I ++ + HV+ DG+I SG EII
Sbjct: 177 AEEINVLLDKDKKPGLRRKSGLLITHLGYILNFVNAD--TAHVLMDGRIACSGNPDEIIA 234
Query: 231 MIEREGFK 238
I ++GFK
Sbjct: 235 DIRKDGFK 242
>sp|Q55791|Y075_SYNY3 PROBABLE ATP-DEPENDENT TRANSPORTER SLR0075 >gi|7445597|pir||S76599
hypothetical protein - Synechocystis sp. (strain PCC
6803) >gi|1001706|dbj|BAA10543.1| (D64004) ABC
transporter subunit [Synechocystis sp.]
Length = 256
Score = 200 bits (503), Expect = 1e-50
Identities = 109/243 (44%), Positives = 155/243 (62%), Gaps = 8/243 (3%)
Query: 1 MLKIEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKI 60
+L I++L V+G +IL+G+NL + GE H IMG NGSGKSTL+ I GHP Y++T G+I
Sbjct: 5 ILSIKNLTASVDGNQILKGVNLEIKAGEVHAIMGRNGSGKSTLSKVITGHPDYEITGGEI 64
Query: 61 IFNGEDITSSSPDERARKGILLAFQVPPEIEGVRILDFL-IQVLTEIKGMKPEEA----- 114
I+ G+D+++ P ERA GI LAFQ P EI GV LDFL I + K + EE
Sbjct: 65 IYQGQDLSALEPHERALAGIFLAFQYPLEIPGVSNLDFLRIAYNAKRKHLGLEELDTFDF 124
Query: 115 YDVVLNKAKELWFDDKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDS 174
D++ K + + + R +N GFSGGE+KR E+LQ +LEP L +LDE DSG+D+D+
Sbjct: 125 EDLIQEKLDVVKMNPAFLERSLNEGFSGGEKKRNEILQMAILEPTLSILDEIDSGLDIDA 184
Query: 175 LSVISRKIEELHNRGVSIILITHYGRIFGHIDKEKLKVHVMKDGKIVKSGGSEIIDMIER 234
L ++S + L N + ++ITHY R+ +I + +HVM DGKIV SGG E+ +E
Sbjct: 185 LRIVSEGVNFLKNPDNATLVITHYQRLLNYIIPD--HIHVMYDGKIVMSGGKELALELEE 242
Query: 235 EGF 237
+G+
Sbjct: 243 KGY 245
>sp|Q02856|ABCX_ANTSP PROBABLE ATP-DEPENDENT TRANSPORTER YCF16 >gi|629426|pir||S37635
hypothetical protein 2 (atpA 3' region) - red alga
(Antithamnion sp.) chloroplast (strain LB 95.79)
>gi|14178|emb|CAA44985.1| (X63382) ORF2 [Antithamnion
sp.]
Length = 251
Score = 198 bits (499), Expect = 4e-50
Identities = 104/243 (42%), Positives = 151/243 (61%), Gaps = 8/243 (3%)
Query: 1 MLKIEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKI 60
+L I++L V + +IL +NL++ GE H IMG NGSGKSTLA IAGHP YK+T G+I
Sbjct: 6 LLNIKNLDVTIGETQILNSLNLSIKPGEIHAIMGKNGSGKSTLAKVIAGHPSYKITNGQI 65
Query: 61 IFNGEDITSSSPDERARKGILLAFQVPPEIEGVRILDFL------IQVLTEIKGMKPEEA 114
+F +D+T P++R+ GI LAFQ P EI GV DFL + + + P
Sbjct: 66 LFENQDVTEIEPEDRSHLGIFLAFQYPVEIPGVTNADFLRIAYNAKRAFDNKEELDPLSF 125
Query: 115 YDVVLNKAKELWFDDKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDS 174
+ + NK + + + R VN GFSGGE+K+ E+LQ LL KL +LDE DSG+D+D+
Sbjct: 126 FSFIENKISNIDLNSTFLSRNVNEGFSGGEKKKNEILQMSLLNSKLAILDETDSGLDIDA 185
Query: 175 LSVISRKIEELHNRGVSIILITHYGRIFGHIDKEKLKVHVMKDGKIVKSGGSEIIDMIER 234
L I+++I L + SIILITHY R+ +I + +HVM+ G+I+ +GGS+ +E+
Sbjct: 186 LKTIAKQINSLKTQENSIILITHYQRLLDYIKPD--YIHVMQKGEIIYTGGSDTAMKLEK 243
Query: 235 EGF 237
G+
Sbjct: 244 YGY 246
>sp|P35020|ABCX_CYACA PROBABLE ATP-DEPENDENT TRANSPORTER YCF16 >gi|629438|pir||S39521
hypothetical protein 257 - red alga (Cyanidium
caldarium) chloroplast >gi|429179|emb|CAA48015.1|
(X67814) orf257 [Galdieria sulphuraria]
Length = 257
Score = 197 bits (495), Expect = 1e-49
Identities = 112/249 (44%), Positives = 162/249 (64%), Gaps = 13/249 (5%)
Query: 1 MLKIEDLHVEVEGRE--ILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKG 58
+L+I++LHV++ E IL GINL VN GE H IMGPNGSGKSTL+ IAGH YKV KG
Sbjct: 6 LLQIKNLHVKLANTEEYILNGINLNVNQGEIHAIMGPNGSGKSTLSKVIAGHSLYKVVKG 65
Query: 59 KIIFNGEDITSSSPDERARKGILLAFQVPPEIEGVRILDFL-IQVLTEIK-----GMKPE 112
+IIF +++ + + ++RA GI LAFQ P EI GV +DFL + +++K + P
Sbjct: 66 EIIFQDQNLLNYTIEDRANLGIFLAFQYPLEIAGVNNIDFLRLAYNSKLKFNQRNPVDPL 125
Query: 113 EAYDVVLNKAKELWFDDKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDV 172
+ ++V K K + D+ + R VN GFSGGE+K+ E+LQ LL+ KL +LDE DSG+D+
Sbjct: 126 KFLEIVYPKLKLVGLDESFLYRKVNEGFSGGEKKKNEILQMSLLDAKLAILDETDSGLDI 185
Query: 173 DSLSVISRKIEELHNRG---VSIILITHYGRIFGHIDKEKLKVHVMKDGKIVKSGGSEII 229
D+L IS I+ + SII+ITHY RI +I + +HVM GKI+K+G + +
Sbjct: 186 DALQDISNAIKSILKMSQFKQSIIIITHYQRILNYIQPD--YIHVMYKGKIIKTGDASLA 243
Query: 230 DMIEREGFK 238
+ +E +G++
Sbjct: 244 NQLESQGYE 252
>pir||A69020 ABC transporter subunit Ycf16 - Methanobacterium
thermoautotrophicum (strain Delta H)
>gi|2622254|gb|AAB85638.1| (AE000884) ABC transporter
subunit Ycf16 [Methanobacterium thermoautotrophicum]
Length = 251
Score = 196 bits (493), Expect = 2e-49
Identities = 110/247 (44%), Positives = 160/247 (64%), Gaps = 15/247 (6%)
Query: 1 MLKIEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKI 60
+L+I DL VEV G+++L+ I+L ++ GE HV++GPNGSGKSTL +TI G PKY+VT G+I
Sbjct: 2 LLEITDLAVEVSGKQVLKDIDLYIDRGETHVLLGPNGSGKSTLFMTILGFPKYRVTNGQI 61
Query: 61 IFNGEDITSSSPDERARKGILLAFQVPPEIEGVRILDFLIQVLTEIKGMKPEEAYDVVL- 119
IF GEDIT S ER R GI ++FQ PP I GV+++D +L G++ E+ L
Sbjct: 62 IFKGEDITDLSTTERVRMGIGVSFQNPPAIRGVKLMD----LLKVESGLETEDELTPELR 117
Query: 120 NKAKELWFDDKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSVIS 179
A ++ FD+ + R VN+GFSGGE KR E+LQ L +P ++ DEPDSGVD++++ +++
Sbjct: 118 GLAAKMKFDESFLERDVNLGFSGGEVKRSEILQLLAQKPDFIMFDEPDSGVDIENVELLA 177
Query: 180 RKIEELHN-------RGVSIILITHYGRIFGHIDKEKLKVHVMKDGKIVKSGG-SEIIDM 231
+I L + R + +LITH G I + + HV+ DG+I SG EII+
Sbjct: 178 EEINVLLDKDKKPGLRKKAGLLITHLGYILNFVSAD--TAHVLMDGRIACSGNPQEIIED 235
Query: 232 IEREGFK 238
I ++GFK
Sbjct: 236 IRKDGFK 242
>pir||S72767 probable ABC-type transport protein B1496_C3_228 - Mycobacterium
leprae >gi|466889|gb|AAA17134.1| (U00013) abc1;
B1496_C3_228 [Mycobacterium leprae]
>gi|2398704|emb|CAB16169.1| (Z99125) ABC-type
transporter [Mycobacterium leprae]
Length = 260
Score = 195 bits (491), Expect = 4e-49
Identities = 115/248 (46%), Positives = 151/248 (60%), Gaps = 14/248 (5%)
Query: 2 LKIEDLHVEVEGRE---------ILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPK 52
L ++DL+V VE IL G++L V GE H +MGPNGSGKSTL+ I GHPK
Sbjct: 4 LIVKDLYVSVEHPNAAESECQIPILNGVDLTVKSGETHALMGPNGSGKSTLSYAIMGHPK 63
Query: 53 YKVTKGKIIFNGEDITSSSPDERARKGILLAFQVPPEIEGVRILDFLIQVLTEIKGMKPE 112
Y+V G I +G D+ + S DERAR G+ LA Q P E+ GV + +FL T I+G P+
Sbjct: 64 YRVISGAITLDGADVLTMSVDERARAGLFLAMQYPVEVPGVSVSNFLRSAATVIRGEPPK 123
Query: 113 EAYDVVLNKAK--ELWFDDKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGV 170
+ V KA L D R VN GFSGGE+KR E+LQ LL+PK+ +LDE DSG+
Sbjct: 124 LRHWVKEVKAAMGALEIDPVFAERSVNEGFSGGEKKRHEILQLELLKPKIAILDETDSGL 183
Query: 171 DVDSLSVISRKIEE-LHNRGVSIILITHYGRIFGHIDKEKLKVHVMKDGKIVKSGGSEII 229
DVD+L V+S + + I+LITHY RI +I E VHV G+IV+SGGSE+
Sbjct: 184 DVDALRVVSDGVNRYADSEHGGILLITHYTRILRYIRPE--FVHVFVGGRIVESGGSELA 241
Query: 230 DMIEREGF 237
D +E+ G+
Sbjct: 242 DELEQNGY 249
>gi|11467679 ABC transporter [Guillardia theta] >gi|5902710|sp|O78474|ABCX_GUITH
PROBABLE ATP-DEPENDENT TRANSPORTER YCF16
>gi|3603004|gb|AAC35665.1| (AF041468) ABC transporter
[Guillardia theta]
Length = 253
Score = 195 bits (490), Expect = 5e-49
Identities = 104/243 (42%), Positives = 154/243 (62%), Gaps = 8/243 (3%)
Query: 1 MLKIEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKI 60
+L++ +LH V +I++G+NL VN GE H IMG NGSGKST A IAGHP Y +T G I
Sbjct: 5 ILEVTNLHAAVNEIKIVKGLNLVVNAGEIHAIMGKNGSGKSTFAKIIAGHPDYTITNGDI 64
Query: 61 IFNGEDITSSSPDERARKGILLAFQVPPEIEGVRILDFL------IQVLTEIKGMKPEEA 114
+ I +P++RA++GI L+FQ P EI GV DFL ++ + M+P E
Sbjct: 65 TYQHTSILELTPEDRAKRGIFLSFQYPIEIPGVTNADFLRLACNARRIYQGLPEMEPLEF 124
Query: 115 YDVVLNKAKELWFDDKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDS 174
++ + +K + + R VN GFSGGE+KR E+LQ +L+ KL +LDE DSG+D+D+
Sbjct: 125 FEYINSKLPLVDLKPSFLTRDVNEGFSGGEKKRNEILQMSILDTKLAVLDETDSGLDIDA 184
Query: 175 LSVISRKIEELHNRGVSIILITHYGRIFGHIDKEKLKVHVMKDGKIVKSGGSEIIDMIER 234
L ++ I+ L N G +IILITHY R+ +I + VHVM++GKI+K+G + + +E+
Sbjct: 185 LRTVANGIKSLANDGNAIILITHYQRLLDYIKPD--FVHVMQEGKIIKTGSASLALDLEK 242
Query: 235 EGF 237
G+
Sbjct: 243 YGY 245
>gi|11465462 unknown [Cyanidium caldarium] >gi|6466365|gb|AAF12947.1|AF022186_70
(AF022186) unknown [Cyanidium caldarium]
Length = 254
Score = 194 bits (489), Expect = 6e-49
Identities = 105/246 (42%), Positives = 152/246 (61%), Gaps = 8/246 (3%)
Query: 1 MLKIEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKI 60
+L I++L V E+L INL + E HVIMGPNGSGKS+L IAGHP YKV +GKI
Sbjct: 6 VLTIQNLKACVNEFEVLHNINLQIKTNETHVIMGPNGSGKSSLLKVIAGHPSYKVIEGKI 65
Query: 61 IFNGEDITSSSPDERARKGILLAFQVPPEIEGVRILDFLIQVLTE------IKGMKPEEA 114
DIT ++P+ER+ G+ L FQ P EI GV DFL V + +K + P E
Sbjct: 66 FVENIDITQATPEERSNLGVFLGFQYPIEITGVNNADFLRAVYNQKRKKQGLKDLDPLEF 125
Query: 115 YDVVLNKAKELWFDDKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDS 174
+++ + D + R +N GFSGGE+KR E+LQ +L +P+L +LDEPDSG+D+D+
Sbjct: 126 LEILSPILDLVSMDQTFLHRNLNEGFSGGEKKRNEILQMILSKPRLAILDEPDSGLDIDA 185
Query: 175 LSVISRKIEELHNRGVSIILITHYGRIFGHIDKEKLKVHVMKDGKIVKSGGSEIIDMIER 234
L IS I +L N+ +++ITHY + ++ + KVH+M GKIV++G + ++R
Sbjct: 186 LRSISEVINKLRNQKQCMLIITHYQNLLDYVIPD--KVHIMDHGKIVETGDVTLAIQLKR 243
Query: 235 EGFKAI 240
+G+K I
Sbjct: 244 KGYKWI 249
>gi|11467510 ORF251 [Odontella sinensis] >gi|267152|sp|Q00830|ABCX_ODOSI
PROBABLE ATP-DEPENDENT TRANSPORTER YCF16
>gi|7445808|pir||S21682 conserved hypothetical protein
251 - Odontella sinensis chloroplast
>gi|11938|emb|CAA43151.1| (X60752) ORF 756 [Odontella
sinensis] >gi|11945|emb|CAA43158.1| (X60752) ORF 252
[Odontella sinensis] >gi|1185205|emb|CAA91688.1|
(Z67753) ORF251 [Odontella sinensis]
Length = 251
Score = 193 bits (485), Expect = 2e-48
Identities = 102/244 (41%), Positives = 151/244 (61%), Gaps = 8/244 (3%)
Query: 1 MLKIEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKI 60
+L+I++L + EIL+ +NL ++ GE H IMGPNGSGKST + +AGHP Y + G I
Sbjct: 7 ILEIKNLKACINENEILKDLNLKIHKGEIHAIMGPNGSGKSTFSKVLAGHPAYNILSGDI 66
Query: 61 IFNGEDITSSSPDERARKGILLAFQVPPEIEGVRILDFL------IQVLTEIKGMKPEEA 114
+F G I + P+ER+ GI LAFQ P EI GV DFL Q + P
Sbjct: 67 LFKGSSILNLDPEERSHMGIFLAFQYPIEIPGVSNEDFLRLAYNSKQKFLNKDEVDPISF 126
Query: 115 YDVVLNKAKELWFDDKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDS 174
+ ++ K K + + R VN GFSGGE+KR E+LQ +LL+ +L +LDE DSG+D+D+
Sbjct: 127 FTIINEKLKLVDMSPVFLSRNVNEGFSGGEKKRNEILQMILLDSELSILDETDSGLDIDA 186
Query: 175 LSVISRKIEELHNRGVSIILITHYGRIFGHIDKEKLKVHVMKDGKIVKSGGSEIIDMIER 234
L +IS+ I N+ +IILITHY R+ ++ VHVM++GKI+K+G +++ +E
Sbjct: 187 LKIISKGINTFMNQNKAIILITHYQRLLDYVQPN--YVHVMQNGKIIKTGTADLAKELES 244
Query: 235 EGFK 238
+G++
Sbjct: 245 KGYE 248
>pir||F82676 ABC transporter ATP-binding protein XF1475 [imported] - Xylella
fastidiosa (strain 9a5c)
>gi|9106499|gb|AAF84284.1|AE003977_7 (AE003977) ABC
transporter ATP-binding protein [Xylella fastidiosa]
Length = 278
Score = 191 bits (481), Expect = 6e-48
Identities = 102/243 (41%), Positives = 151/243 (61%), Gaps = 8/243 (3%)
Query: 1 MLKIEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKI 60
MLKI+ LH V G+EIL+G++L + G+ H IMGPNG+GKSTL +AG Y +T G++
Sbjct: 1 MLKIDTLHASVAGKEILKGLSLDIAPGQVHAIMGPNGAGKSTLGHILAGRDGYDITAGQV 60
Query: 61 IFNGEDITSSSPDERARKGILLAFQVPPEIEGVRILDFLIQVLTEIKGMKPEEAYDVV-- 118
F+ + + P+ERA G+ LAFQ P EI GV FL L + + EE D +
Sbjct: 61 TFDNRPLLTLQPEERAAAGLFLAFQYPVEIPGVNNTYFLRSALNAQRKARGEEELDSIQF 120
Query: 119 LNKAKE----LWFDDKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDS 174
L + +E L D+ + R VN GFSGGE+KR E+ Q +LEPKL +LDE DSG+D+D+
Sbjct: 121 LKRVREKLAVLHLKDELLHRGVNEGFSGGEKKRNEIFQLAVLEPKLAILDETDSGLDIDA 180
Query: 175 LSVISRKIEELHNRGVSIILITHYGRIFGHIDKEKLKVHVMKDGKIVKSGGSEIIDMIER 234
L ++ + L + S ++ITHY R+ +I + VHV+ +G+IV++GG E+ +E+
Sbjct: 181 LKTVADGVNALRSPERSFLVITHYQRLLDYIKPD--VVHVLAEGRIVETGGPELALELEQ 238
Query: 235 EGF 237
G+
Sbjct: 239 HGY 241
>gb|AAF04162.1|AC011560_3 (AC011560) putative ABC transporter ATPase; 10053-12032
[Arabidopsis thaliana]
Length = 338
Score = 190 bits (477), Expect = 2e-47
Identities = 97/250 (38%), Positives = 157/250 (62%), Gaps = 10/250 (4%)
Query: 1 MLKIEDLHVEV--EGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKG 58
+L++ DL + +EIL+G+NL V +GE H +MG NGSGKST + + GHP Y+VT G
Sbjct: 91 LLEVRDLRAVIAESRQEILKGVNLVVYEGEVHAVMGKNGSGKSTFSKVLVGHPDYEVTGG 150
Query: 59 KIIFNGEDITSSSPDERARKGILLAFQVPPEIEGVRILDFLIQVLTEIK------GMKPE 112
I+F G+++ P++R+ G+ ++FQ P EI GV +DFL K + P
Sbjct: 151 SIVFKGQNLLDMEPEDRSLAGLFMSFQSPVEIPGVSNMDFLNMAFNARKRKLGQPELDPI 210
Query: 113 EAYDVVLNKAKELWFDDKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDV 172
+ Y +++K + + + R VN GFSGGERKR E+LQ +L +L +LDE DSG+DV
Sbjct: 211 QFYSHLVSKLEVVNMKTDFLNRNVNEGFSGGERKRNEILQLAVLGAELAILDEIDSGLDV 270
Query: 173 DSLSVISRKIEELHNRGVSIILITHYGRIFGHIDKEKLKVHVMKDGKIVKSGGSEIIDMI 232
D+L +++ + L S+++ITHY R+ +I + +H+M++G+I+K+G + + ++
Sbjct: 271 DALQDVAKAVNGLLTPKNSVLMITHYQRLLDYI--KPTLIHIMENGRIIKTGDNSLAKLL 328
Query: 233 EREGFKAIFG 242
E+EG+KAI G
Sbjct: 329 EKEGYKAISG 338
>pir||B72552 probable ATP-dependent transporter APE1702 - Aeropyrum pernix
(strain K1) >gi|5105390|dbj|BAA80703.1| (AP000062) 253aa
long hypothetical ATP-dependent transporter [Aeropyrum
pernix]
Length = 253
Score = 185 bits (465), Expect = 4e-46
Identities = 94/246 (38%), Positives = 154/246 (62%), Gaps = 8/246 (3%)
Query: 2 LKIEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKII 61
L+++ L ++ + +L ++ + GE H +MGPNGSGKS+L I G Y+V +G I+
Sbjct: 3 LEVKGLTAKIGEKVVLNKVDFDLKYGEVHAVMGPNGSGKSSLGYVIMGREIYEVVEGDIL 62
Query: 62 FNGEDITSSSPDERARKGILLAFQVPPEIEGVRILDFLIQVLTEIKGM----KPEEAYDV 117
+GE I P+ERA KGI +A Q PP+I GVR+ +I + + G KP + V
Sbjct: 63 LDGESIKELPPEERALKGIFMAQQDPPQIPGVRLSSLIIAFVNKRLGAQDLSKPADPKIV 122
Query: 118 --VLNKAKELWFDDKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSL 175
+ A +L D + + R VNVGFSGGE+KR ELLQA++ +PK+++LDEPDSG+D+D L
Sbjct: 123 KRMYEYATKLGLDREILNREVNVGFSGGEKKRSELLQAMIFDPKIVILDEPDSGLDIDGL 182
Query: 176 SVISRKIEELHNRGVSIILITHYGRIFGHIDKEKLKVHVMKDGKIVKSGGSEIIDMIERE 235
+++ I++L + G ++LITHY R+ ++ + +V V+ G ++ GG+E+ +E +
Sbjct: 183 KIVAEFIKQLRDSGRGVMLITHYARLLNFVEPD--RVTVLYRGSVLARGGAELARQVEEK 240
Query: 236 GFKAIF 241
G+ ++
Sbjct: 241 GYAQLY 246
>sp|Q60350|Y035_METJA HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PROTEIN MJ0035
>gi|2127733|pir||C64304 ABC transporter subunit -
Methanococcus jannaschii >gi|1590838|gb|AAB98016.1|
(U67462) ABC transporter subunit [Methanococcus
jannaschii]
Length = 250
Score = 184 bits (462), Expect = 9e-46
Identities = 99/225 (44%), Positives = 142/225 (63%), Gaps = 5/225 (2%)
Query: 1 MLKIEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKI 60
+LK+EDLHV REIL+G+NL V + E H I+GPNG+GKSTLA TI G YK TKG+I
Sbjct: 6 LLKVEDLHVYRGNREILKGVNLTVEENEIHAIIGPNGAGKSTLAYTIMGISGYKPTKGRI 65
Query: 61 IFNGEDITSSSPDERARKGILLAFQVPPEIEGVRILDFLIQVLTEIKGMKPEEAYDVVLN 120
IF G DI + ERAR G+ LA+Q P EG+++ ++L+ + E E A + +
Sbjct: 66 IFKGVDIIDKNITERARMGMTLAWQEPARFEGIKVKNYLMLGMNEKYKKDKEIAEEKIRE 125
Query: 121 KAKELWFD-DKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSVIS 179
K + D DK + R+V+ SGGERKR+EL + +EP L +LDEPDSG+D+ S I
Sbjct: 126 ALKLVNLDPDKYLDRYVDETLSGGERKRIELASIICMEPDLAILDEPDSGIDIVSFDEIK 185
Query: 180 RKIEELHNRGVSIILITHYGRIFGHIDKEKLKVHVMKDGKIVKSG 224
R + L ++G S+++ITH + H D +V ++ G+++KSG
Sbjct: 186 RVFDYLKDKGCSLLVITHREELAEHAD----RVSLICAGEVIKSG 226
>gb|AAG19051.1| (AE005004) ABC transporter, ATP-binding protein; YurY
[Halobacterium sp. NRC-1]
Length = 308
Score = 178 bits (446), Expect = 7e-44
Identities = 108/296 (36%), Positives = 160/296 (53%), Gaps = 62/296 (20%)
Query: 2 LKIEDLHVEVE---GREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKG 58
L+++D+H EV G +IL G++L + GE H +MGPNGSGKST A IAGHP Y VT G
Sbjct: 4 LELKDVHAEVAEDGGEKILDGVDLEIPSGEIHALMGPNGSGKSTTAKIIAGHPAYDVTDG 63
Query: 59 KIIFNGED-----------------ITSSSPDERARKGILLAFQVPPEIEGVRILDFL-- 99
+++F ED + P+ERA GI LAFQ P EIEGV +++FL
Sbjct: 64 EVLFTIEDDDFDGAEELPADDRTFDLLGLEPNERAALGIFLAFQYPAEIEGVTLVNFLRT 123
Query: 100 ---------IQVLTEIKGMKPEEAYD----------------------------VVLNKA 122
++L E ++A D ++ K
Sbjct: 124 ALNAKLDEREELLFEDDDEDADDAADDDEDAGYETSPMEGPADDGEIGVADFQEILSEKM 183
Query: 123 KELWFDDKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSVISRKI 182
+ L D+K R++N GFSGGE+K+ E+LQA +LEP + +LDE DSG+D+D L +S I
Sbjct: 184 ETLDMDEKFANRYLNAGFSGGEKKQNEVLQAAILEPSIAVLDEIDSGLDIDRLQDVSTGI 243
Query: 183 EELHN-RGVSIILITHYGRIFGHIDKEKLKVHVMKDGKIVKSGGSEIIDMIEREGF 237
L + + I+ ITHY RI +++ + +VH+M DG++V G +E+ + +E EG+
Sbjct: 244 NALRDEQDTGILQITHYQRILDYVEPD--RVHIMLDGEVVMEGDAELAEKLEDEGY 297
>pir||H71302 probable ABC transporter, ATP-binding protein - syphilis spirochete
>gi|3322909|gb|AAC65587.1| (AE001236) ABC transporter,
ATP-binding protein [Treponema pallidum]
Length = 259
Score = 178 bits (446), Expect = 7e-44
Identities = 92/239 (38%), Positives = 143/239 (59%), Gaps = 4/239 (1%)
Query: 1 MLKIEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKI 60
+L I DL + + R IL+ +NL +N GE H +MGPNG+GKSTLA TI G+P + +G+I
Sbjct: 4 LLDIRDLCMSIADRPILKSLNLTLNTGEVHAVMGPNGAGKSTLAGTIVGNPHCTIERGEI 63
Query: 61 IFNGEDITSSSPDERARKGILLAFQVPPEIEGVRILDFLIQVLTEIKGMKPE--EAYDVV 118
F G+ I ERAR+GI L+FQ P E+ G+ + +FL + G K + + +
Sbjct: 64 YFQGQCINDVPVYERARRGIFLSFQTPEEVPGLSVEEFLRAAKEAVLGTKVSVLDFHTQL 123
Query: 119 LNKAKELWFDDKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSVI 178
K L + R +NVGFSGGE+K+ E+LQ +LEPKL +LDE DSG+DVD+ ++
Sbjct: 124 RAKLARLRISEAYASRGLNVGFSGGEKKKNEILQLAVLEPKLAILDETDSGLDVDATRIV 183
Query: 179 SRKIEELHNRGVSIILITHYGRIFGHIDKEKLKVHVMKDGKIVKSGGSEIIDMIEREGF 237
I+++ + ++ITH+ + +I + VH++ DG IVK+G ++ + G+
Sbjct: 184 FEGIDDIRTPDMGFLIITHHREVLEYIKPD--VVHILVDGTIVKTGDVSLVHYVVEHGY 240
>gb|AAF73525.1| (AE002273) ABC transporter, ATP-binding protein [Chlamydia
muridarum]
Length = 255
Score = 168 bits (420), Expect = 8e-41
Identities = 92/254 (36%), Positives = 154/254 (60%), Gaps = 20/254 (7%)
Query: 1 MLKIEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKI 60
ML + DLHV E ++IL G++L++ GE H+IMGPNG+GKSTLA ++G +V G++
Sbjct: 1 MLHLYDLHVCCEEKKILEGLSLSIRPGELHIIMGPNGAGKSTLAKVLSGDDSVEVASGRM 60
Query: 61 IFNGEDITSSSPDERARKGILLAFQVPPEIEGVRILDFLIQVLTEIKGMKPEE-----AY 115
+G D+ SP++RA G+ ++FQ PPEI GV FL + + + +E A+
Sbjct: 61 TLSGSDLIEMSPEKRAHAGMFISFQHPPEIPGVNNRLFLKEACNACRKARNQEVLEDSAF 120
Query: 116 DVVLNKAKELW-------FDDKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDS 168
+ +L +E + F D++ VN GFSGGE+K+ EL Q L+LEPK+++LDEPDS
Sbjct: 121 NELLASLEETYGFPGFHFFPDRN----VNEGFSGGEKKKNELWQMLILEPKMVVLDEPDS 176
Query: 169 GVDVDSLSVISRKIEELHNR--GVSIILITHYGRIFGHIDKEKLKVHVMKDGKIVKSGGS 226
G+DVD+L I ++ + + ++TH R+ + + VH++ +G++V SG
Sbjct: 177 GLDVDALKGICSVVQTYRRKHPETAFCIVTHNPRLGDLLHPD--HVHILLNGRVVFSGDM 234
Query: 227 EIIDMIEREGFKAI 240
+++ +ER+ ++ +
Sbjct: 235 HLMEELERKSYQEL 248
>gi|11499941 ABC transporter, ATP-binding protein [Archaeoglobus fulgidus]
>gi|7445691|pir||D69545 ABC transporter, ATP-binding
protein homolog - Archaeoglobus fulgidus
>gi|2650733|gb|AAB91301.1| (AE001113) ABC transporter,
ATP-binding protein [Archaeoglobus fulgidus]
Length = 254
Score = 166 bits (417), Expect = 2e-40
Identities = 96/246 (39%), Positives = 154/246 (62%), Gaps = 16/246 (6%)
Query: 1 MLKIEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKI 60
+L++ +L V+V ++IL+ +NL + +GE V+ GPNGSGKSTL + G+P YKVT G+I
Sbjct: 3 VLRVVNLGVKVGEKKILKNVNLFIKEGETFVLFGPNGSGKSTLLNALIGNPSYKVTSGRI 62
Query: 61 IFNGEDITSSSPDERARKGILLAFQVPPEIEGVRILDFLIQVLTEIKGMKPEEAYDVVLN 120
+F DIT+ +ER + GI +AFQ PP+I GV+++D +++ + G D +L
Sbjct: 63 LFKKVDITNLPTNERVKLGIGIAFQNPPKISGVKLID-VLRYCARVGGY----GEDKILE 117
Query: 121 KAKELWFDDKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSVISR 180
A+++ D + R +N+GFSGGE KR ELLQ +L+ P L+LLDEPDSGVD++++++I
Sbjct: 118 LAEKMRMTD-HLYREINMGFSGGEVKRSELLQLMLMNPDLVLLDEPDSGVDLENVALIGE 176
Query: 181 KI-------EELHNRGVSIILITHYGRIFGHIDKEKLKVHVMKDGKIVKSG-GSEIIDMI 232
I +E R S I+ITH G I ++D + ++ +G+I G +I++ I
Sbjct: 177 AIRTLLERDKEEGERTKSGIIITHQGHILDYVDAD--YAAILYNGRIACIGEPKDILNQI 234
Query: 233 EREGFK 238
G++
Sbjct: 235 RNHGYE 240
>gb|AAF76373.1| (AC013428) unknown protein [Arabidopsis thaliana]
Length = 214
Score = 164 bits (411), Expect = 9e-40
Identities = 84/216 (38%), Positives = 135/216 (61%), Gaps = 8/216 (3%)
Query: 33 MGPNGSGKSTLALTIAGHPKYKVTKGKIIFNGEDITSSSPDERARKGILLAFQVPPEIEG 92
MG NGSGKST + + GHP Y+VT G I+F G+++ P++R+ G+ ++FQ P EI G
Sbjct: 1 MGKNGSGKSTFSKVLVGHPDYEVTGGSIVFKGQNLLDMEPEDRSLAGLFMSFQSPVEIPG 60
Query: 93 VRILDFLIQVLTEIK------GMKPEEAYDVVLNKAKELWFDDKDMRRFVNVGFSGGERK 146
V +DFL K + P + Y +++K + + + R VN GFSGGERK
Sbjct: 61 VSNMDFLNMAFNARKRKLGQPELDPIQFYSHLVSKLEVVNMKTDFLNRNVNEGFSGGERK 120
Query: 147 RLELLQALLLEPKLLLLDEPDSGVDVDSLSVISRKIEELHNRGVSIILITHYGRIFGHID 206
R E+LQ +L +L +LDE DSG+DVD+L +++ + L S+++ITHY R+ +I
Sbjct: 121 RNEILQLAVLGAELAILDEIDSGLDVDALQDVAKAVNGLLTPKNSVLMITHYQRLLDYI- 179
Query: 207 KEKLKVHVMKDGKIVKSGGSEIIDMIEREGFKAIFG 242
+ +H+M++G+I+K+G + + ++E+EG+KAI G
Sbjct: 180 -KPTLIHIMENGRIIKTGDNSLAKLLEKEGYKAISG 214
>pir||A72048 ABC transporter ATPase - Chlamydophila pneumoniae (strain CWL029)
>gi|4376993|gb|AAD18830.1| (AE001651) ABC Transporter
ATPase [Chlamydophila pneumoniae CWL029]
>gi|8163355|gb|AAF73622.1| (AE002169) ABC transporter,
ATP-binding protein [Chlamydophila pneumoniae AR39]
>gi|8979063|dbj|BAA98898.1| (AP002547) ABC transporter
ATPase [Chlamydophila pneumoniae J138]
Length = 256
Score = 162 bits (407), Expect = 3e-39
Identities = 97/252 (38%), Positives = 149/252 (58%), Gaps = 15/252 (5%)
Query: 1 MLKIEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKI 60
MLKI+ LH +IL NL + G HVIMGPNG+GKSTLA +AG V+ G+I
Sbjct: 1 MLKIKHLHASCNDVKILDDFNLNIQPGTMHVIMGPNGAGKSTLAKILAGDESVLVSSGEI 60
Query: 61 IFNGEDITSSSPDERARKGILLAFQVPPEIEGVRILDFLIQVLTEIKGMKPE-----EAY 115
+++ S P+ER+R G+ + FQ+PPEI GV FL + E + +
Sbjct: 61 ALQEQNLLSMLPEERSRAGLFVGFQMPPEIPGVNNKMFLRDAYNARRRANQEGDISIDEF 120
Query: 116 DVVLNKAKELW----FDDKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVD 171
+ +L+ E + D + R VN GFSGGERKR E+ Q L+LEP+++LLDEPDSG+D
Sbjct: 121 NTLLSTVLETYEYNATTDLFLDRNVNEGFSGGERKRNEICQMLVLEPEMVLLDEPDSGLD 180
Query: 172 VDSLSVISRKIE---ELHNRGVSIILITHYGRIFGHIDKEKLKVHVMKDGKIVKSGGSEI 228
VD+L +I R +E ELH S+ ++TH ++ G++ + + VH++ DG++ SG +
Sbjct: 181 VDALRLICRVLEKYRELHPTS-SLCIVTHNPKL-GNLIRPDV-VHLLLDGRVALSGDVSL 237
Query: 229 IDMIEREGFKAI 240
+ +E + ++ +
Sbjct: 238 MHELEAKSYQEV 249
>pir||A71483 probable ABC transporter ATPase - Chlamydia trachomatis (serotype
D, strain UW3/Cx) >gi|3329138|gb|AAC68280.1| (AE001339)
ABC Transporter ATPase [Chlamydia trachomatis]
Length = 255
Score = 160 bits (400), Expect = 2e-38
Identities = 91/250 (36%), Positives = 151/250 (60%), Gaps = 12/250 (4%)
Query: 1 MLKIEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKI 60
ML + D+HV E ++IL G++L+++ GE H+IMGPNG+GKSTLA ++G +V+ G +
Sbjct: 1 MLHLCDVHVCCEEKKILEGLSLSIHPGELHIIMGPNGAGKSTLAKVLSGDESVEVSSGTM 60
Query: 61 IFNGEDITSSSPDERARKGILLAFQVPPEIEGVRILDFLIQVLTEIK-----GMKPEEAY 115
G+D+ SP+ERA G+ ++FQ P EI GV FL + + + + A+
Sbjct: 61 TLAGQDLLELSPEERAHAGMFISFQHPLEIPGVNNRIFLKEACNACRKARNQAVLDDAAF 120
Query: 116 DVVLNKAKELW-FDDKDM--RRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDV 172
+ +L +E++ F R VN GFSGGE+K+ EL Q L LEPK+++LDEPDSG+DV
Sbjct: 121 EELLTDLEEVYGFPGFHFFSNRNVNEGFSGGEKKKNELWQMLALEPKMVVLDEPDSGLDV 180
Query: 173 DSLSVISRKIEELHNR--GVSIILITHYGRIFGHIDKEKLKVHVMKDGKIVKSGGSEIID 230
D+L I ++ + + +ITH R+ + + VH++ +G++V SG +++
Sbjct: 181 DALKGICSVLQRYRQQHPETAFCIITHNPRLGDLLQPD--HVHILLNGRVVFSGDMHLME 238
Query: 231 MIEREGFKAI 240
+ER+ ++ +
Sbjct: 239 ELERKSYQEL 248
>gb|AAK41206.1| ABC transporter [Sulfolobus solfataricus]
Length = 162
Score = 151 bits (378), Expect = 7e-36
Identities = 78/142 (54%), Positives = 97/142 (67%), Gaps = 2/142 (1%)
Query: 2 LKIEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKII 61
LKIEDLHVEVEG+EILRGINL V GE H +MGPNGSGK++L+L I GHPKYK+TKG+I+
Sbjct: 4 LKIEDLHVEVEGKEILRGINLEVRSGEIHALMGPNGSGKTSLSLAIMGHPKYKITKGRIV 63
Query: 62 FNGEDITSSSPDERARKGILLAFQVPPEIEGVRILDFLIQVLTEIKGMKPE--EAYDVVL 119
+GEDIT+ P E+A+KGI LAFQ P EI GVR+ L+ ++ E V
Sbjct: 64 LDGEDITNLEPHEKAKKGIFLAFQNPIEIAGVRLSTLLVAEYNKVSDSSASVMEVISKVK 123
Query: 120 NKAKELWFDDKDMRRFVNVGFS 141
N +KE+ D + R V GFS
Sbjct: 124 NISKEVGIADSLLNRGVFEGFS 145
>pir||G72255 ABC transporter, ATP-binding protein - Thermotoga maritima (strain
MSB8) >gi|4981982|gb|AAD36488.1|AE001794_4 (AE001794)
ABC transporter, ATP-binding protein [Thermotoga
maritima]
Length = 245
Score = 151 bits (378), Expect = 7e-36
Identities = 98/234 (41%), Positives = 136/234 (57%), Gaps = 18/234 (7%)
Query: 1 MLKIEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKI 60
+L++ D+ EVEG+ IL+GIN + I+G NG+GKSTLA I G Y+ T+GKI
Sbjct: 3 VLELIDVWYEVEGKAILKGINARFEKQRVYSILGTNGAGKSTLAYLIMGLEGYRPTRGKI 62
Query: 61 IFNGEDITSSSPDERARKGILLAFQVPPEIEGVRILDFLIQVLTEIKGMKPEEAYDVV-- 118
+ +GEDIT S ERA++GI L +Q P G++I D+L L + + EE V+
Sbjct: 63 LLDGEDITDLSVTERAKRGITLMWQEPARFTGIKIRDYL--TLGGRRKVSKEELERVLEL 120
Query: 119 --LNKAKELWFDDKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLS 176
LN A L R V+ SGGERKR+EL LL++P+ +LDEPDSG+D+ SL
Sbjct: 121 VGLNPALYL-------ERNVDEKLSGGERKRVELASILLMKPRYTILDEPDSGIDIMSLE 173
Query: 177 VISRKIEELHNRGVSIILITHYGRIFGHIDKEKLKVHVMKDGKIVKSGG-SEII 229
+I + + EL + G S+IL+TH I D L H G I+K G SEI+
Sbjct: 174 MIEKVLSELVSAGGSVILVTHREEIALESDYAFLICH----GSILKEGNPSEIV 223
>pir||B71077 probable ABC transporter ATP-binding protein - Pyrococcus
horikoshii >gi|3257293|dbj|BAA29976.1| (AP000004) 237aa
long hypothetical ABC transporter ATP-binding protein
[Pyrococcus horikoshii]
Length = 237
Score = 134 bits (333), Expect = 1e-30
Identities = 87/237 (36%), Positives = 137/237 (57%), Gaps = 16/237 (6%)
Query: 1 MLKIEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKI 60
ML + ++ V+GR I+ IN+ +G + I+GPNG+GKST+A + G K ++G++
Sbjct: 1 MLCLRNVTYRVDGRRIIERINMRFKEGMTYSILGPNGAGKSTIAYILMG--VMKPSEGRV 58
Query: 61 IFNGEDITSSSPDERARKGILLAFQVPPEIEGVRILDFLIQVLTEIKGMKPE--EAYDVV 118
+ +G+DIT+ S ERAR GI L +Q P +G+ + +L + +IK K E E ++V
Sbjct: 59 LLDGDDITNLSITERARLGITLLWQEPARYDGITVEKYLT-LGGKIKVDKNEMREILELV 117
Query: 119 LNKAKELWFDDKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSVI 178
EL+ RFV+ SGGERKR+EL L+L P+ +LDEPDSG+D+ + +I
Sbjct: 118 -GLPYELY-----AHRFVDKSLSGGERKRIELASILMLRPRYAILDEPDSGLDITAGELI 171
Query: 179 SRKIEELHNRGVSIILITHYGRIFGHIDKEKLKVHVMKDGKIVKSGGS-EIIDMIER 234
+E G ++ILITH+ I D + + G+I+K G S EI+D ++
Sbjct: 172 ENVLEYFRRVGTTVILITHHEEIAAKTD----FAYFVCAGRIIKKGFSREIVDYYKK 224
>gb|AAF19582.1|AC011708_25 (AC011708) putative ABC transporter [Arabidopsis thaliana]
Length = 268
Score = 123 bits (306), Expect = 2e-27
Identities = 64/164 (39%), Positives = 98/164 (59%), Gaps = 8/164 (4%)
Query: 1 MLKIEDLHVEV--EGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKG 58
+L++ DL + +EIL+G+NL V +GE H +MG NGSGKST + + GHP Y+VT G
Sbjct: 91 LLEVRDLRAVIAESRQEILKGVNLVVYEGEVHAVMGKNGSGKSTFSKVLVGHPDYEVTGG 150
Query: 59 KIIFNGEDITSSSPDERARKGILLAFQVPPEIEGVRILDFLIQVLTEIK------GMKPE 112
I+F G+++ P++R+ G+ ++FQ P EI GV +DFL K + P
Sbjct: 151 SIVFKGQNLLDMEPEDRSLAGLFMSFQSPVEIPGVSNMDFLNMAFNARKRKLGQPELDPI 210
Query: 113 EAYDVVLNKAKELWFDDKDMRRFVNVGFSGGERKRLELLQALLL 156
+ Y +++K + + + R VN GFSGGERKR E+LQ ++
Sbjct: 211 QFYSHLVSKLEVVNMKTDFLNRNVNEGFSGGERKRNEILQLAVM 254
>pir||E70337 ABC transporter - Aquifex aeolicus >gi|2983089|gb|AAC06695.1|
(AE000689) ABC transporter [Aquifex aeolicus]
Length = 238
Score = 117 bits (291), Expect = 1e-25
Identities = 76/248 (30%), Positives = 136/248 (54%), Gaps = 20/248 (8%)
Query: 1 MLKIEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKI 60
ML++ ++ + +++L+G +L+VN GE ++GPNG+GK+TL +I G V KGK+
Sbjct: 1 MLEVREVEKSFKKKKVLKGGSLSVNKGEIVGLLGPNGAGKTTLFNSIIGF--ISVDKGKV 58
Query: 61 IFNGEDITSSSPDERARKGILLAFQVPPEIEGVRILDFLIQVLTEIKGMKPEEAYDVVLN 120
+ +GED+T P +RA+KG+ Q E + +L+ L+ L K E +
Sbjct: 59 LLDGEDVTHLPPFKRAQKGLAFLPQEHTLFEDLTVLENLLIFLEFFTDSKEE-----AIT 113
Query: 121 KAKELWFDD-----KDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSL 175
KA+ L D KD + + SGG+++RLE+ ++L+ PK +LLDEP +G+D +
Sbjct: 114 KAEALLEDFGLLELKDQKAYA---LSGGQKRRLEIARSLITTPKYVLLDEPFAGLDPIIV 170
Query: 176 SVISRKIEELHNRGVSIILITHYGRIFGHIDKEKLKVHVMKDGKIVKSGGSEIIDMIERE 235
S I ++ L N G+ +++ H R K +V+++ +GK++ G E +++ E
Sbjct: 171 SEIREIVKNLKNNGIGVLITDHNVR---ETIKMVDRVYIISEGKVLAHGKPE--EVVNNE 225
Query: 236 GFKAIFGG 243
+ + G
Sbjct: 226 AVRKTYLG 233
>gi|11498564 branched-chain amino acid ABC transporter, ATP-binding protein
(braF-3) {Methanococcus jannasch [Archaeoglobus
fulgidus] >gi|7445761|pir||G69369 branched-chain amino
acid ABC transporter, ATP-binding protein (braF-3)
homolog - Archaeoglobus fulgidus
>gi|2649639|gb|AAB90284.1| (AE001038) branched-chain
amino acid ABC transporter, ATP-binding protein (braF-3)
{Methanococcus jannasch [Archaeoglobus fulgidus]
Length = 212
Score = 113 bits (279), Expect = 3e-24
Identities = 80/224 (35%), Positives = 121/224 (53%), Gaps = 15/224 (6%)
Query: 1 MLKIEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKI 60
ML++ DL G +LRGINL V F I GPNGSGKSTL IAG K T G+I
Sbjct: 1 MLRVIDLSKVYNGNVVLRGINLEVEG--FVGIFGPNGSGKSTLLKIIAGLEK--PTCGRI 56
Query: 61 IFNGEDITSSSPDERARKGILLAFQVPPEIEGVRILDFLIQVLTEIKGMKPEEAYDVVLN 120
IF GEDIT+ ++ AR GI + FQ+ + + +++ + L K Y +
Sbjct: 57 IFEGEDITAMKAEKIARMGISMVFQISRPFKNLSVVENIATPLLLSK------RYREAME 110
Query: 121 KAKELW-FDDKDMRRFVNVG-FSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSVI 178
+A+E+ F D + G S GE + LE+ +AL ++PKLLLLDEP SG+DV++ +
Sbjct: 111 RAEEICEFVGLDALKEERAGKLSQGELRLLEIGRALAMQPKLLLLDEPFSGLDVENARRV 170
Query: 179 SRKIEELHNRGVSIILITHYGRIFGHIDKEKLKVHVMKDGKIVK 222
R + ++ GV ++ H ++ + K + M+ GK+ +
Sbjct: 171 RRILRKIKKEGVPALITAHRMKLLRDLAD---KSYEMRGGKLAE 211
>sp|P45073|YHBG_HAEIN PROBABLE ABC TRANSPORTER ATP-BINDING PROTEIN HI1148
>gi|1074660|pir||I64167 hypothetical protein HI1148 -
Haemophilus influenzae (strain Rd KW20)
>gi|1574704|gb|AAC22803.1| (U32794) ABC transporter,
ATP-binding protein [Haemophilus influenzae Rd]
Length = 241
Score = 112 bits (278), Expect = 4e-24
Identities = 77/246 (31%), Positives = 133/246 (53%), Gaps = 13/246 (5%)
Query: 1 MLKIEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKI 60
+L E+L + R+++ ++L VN E ++GPNG+GK+T + G + +GKI
Sbjct: 3 ILTAENLAKSYKSRKVVSDVSLTVNSNEIVGLLGPNGAGKTTTFYMVVG--LVRQDQGKI 60
Query: 61 IFNGEDITSSSPDERARKGILLAFQVPPEIEGVRILDFLIQVLTEIKGMKPEEAYDVVLN 120
+ +GEDI+ RA++GI Q + + + L+ VL K + P++ +
Sbjct: 61 VIDGEDISLLPMHNRAQRGIGYLPQEASIFRRLTVYENLMAVLEIRKDLTPQQRRE---- 116
Query: 121 KAKELW--FDDKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSVI 178
KA EL F+ +R + SGGER+R+E+ +AL PK +LLDEP +GVD S+S I
Sbjct: 117 KADELIEEFNISHIRDNLGQALSGGERRRVEIARALAANPKFILLDEPFAGVDPISVSDI 176
Query: 179 SRKIEELHNRGVSIILITHYGRIFGHIDKEKLKVHVMKDGKIVKSGGSEIIDMIEREGFK 238
+ I +L NRG+ +++ H R + + + +++ GKI+ +G E ++ E K
Sbjct: 177 KKIITDLRNRGLGVLITDHNVRETLDVCE---RAYIVGAGKIIATGTPE--QVMNDEQVK 231
Query: 239 AIFGGE 244
++ GE
Sbjct: 232 RVYLGE 237
>gi|11498986 branched-chain amino acid ABC transporter, ATP-binding protein
(braF-4) {Methanococcus jannasch [Archaeoglobus
fulgidus] >gi|7445945|pir||E69423 branched-chain amino
acid ABC transporter, ATP-binding protein (braF-4)
homolog - Archaeoglobus fulgidus
>gi|2649182|gb|AAB89855.1| (AE001008) branched-chain
amino acid ABC transporter, ATP-binding protein (braF-4)
{Methanococcus jannasch [Archaeoglobus fulgidus]
Length = 274
Score = 110 bits (273), Expect = 1e-23
Identities = 74/239 (30%), Positives = 132/239 (54%), Gaps = 16/239 (6%)
Query: 1 MLKIEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKI 60
+L+ ++L +G + L +N+ V G +++GPNGSGK+T T++G Y+ +GK+
Sbjct: 20 ILQTQNLSKFFDGLKALNRVNIGVEKGSITLVIGPNGSGKTTFINTVSGF--YRADEGKV 77
Query: 61 IFNGEDITSSSPDERARKGILLAFQVPPEIEGVRILDFLI--------QVLTEIKGMKPE 112
F G+DIT+ P E +R GI+ FQ+P ++ + +L+ L+ ++ + G +
Sbjct: 78 FFEGKDITNKPPHEISRLGIVRTFQIPQPLKKMTVLENLLIAPEGYGERIFHSVSGRWLK 137
Query: 113 EAYDVVLNKAKELWFDDKD-MRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVD 171
E ++V + L F D + SGG+ K LE+ +A++ + KLL++DEP +GV+
Sbjct: 138 EEEEIVEKAFRILEFLKLDHLWDSEAQNLSGGQLKLLEVARAMMKDAKLLIMDEPIAGVN 197
Query: 172 -VDSLSVISRKIEELHNRGVSIILITHYGRIFGHIDKEKLKVHVMKDGKIVKSGGSEII 229
V S S++ R + EL GVS +++ H I + K ++VM +G ++ G E I
Sbjct: 198 PVLSHSMLERFV-ELKKMGVSFLIVEHRLDI---VLKYTDHIYVMANGSVIAEGKEEDI 252
>pir||H72356 amino acid ABC transporter, ATP-binding protein - Thermotoga
maritima (strain MSB8)
>gi|4981110|gb|AAD35676.1|AE001734_3 (AE001734) amino
acid ABC transporter, ATP-binding protein [Thermotoga
maritima]
Length = 242
Score = 109 bits (271), Expect = 2e-23
Identities = 76/229 (33%), Positives = 128/229 (55%), Gaps = 8/229 (3%)
Query: 1 MLKIEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKI 60
+LKIEDLH +LRGI+L V GE I+GP+GSGKSTL I +Y+ +GKI
Sbjct: 3 VLKIEDLHKYFGKLYVLRGIDLEVKKGEVISIIGPSGSGKSTLLRCINLLEEYQ--RGKI 60
Query: 61 IFNGEDITSSSPDERARKGILLAFQVPPEIEGVRILDFLIQVLTEIKGMKPEEAYDVVLN 120
F GE IT + + R R I + FQ + +L+ L ++K M+ +EA +
Sbjct: 61 YFKGELITHRNIN-RIRSSIGMVFQQFNLFPHLSVLNNLTLAPMKVKNMQKDEAVEKAKK 119
Query: 121 KAKELWFDDKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSVISR 180
+ + +K + N+ SGG+++R+ + +AL+++P+L+L DEP S +D + + +
Sbjct: 120 LLERVGLIEKINEKPGNL--SGGQQQRVAIARALMMDPELMLFDEPTSALDPELVKEVLD 177
Query: 181 KIEELHNRGVSIILITHYGRIFGHIDKEKLKVHVMKDGKIVKSGGSEII 229
I++L G++++++TH R + +V M +G+IV+ G E I
Sbjct: 178 VIKDLAQSGMTMLIVTHEMRFARDVSD---RVVFMDEGRIVEMGPPEKI 223
>gi|11497837 branched-chain amino acid ABC transporter, ATP-binding protein
(braG-1) [Archaeoglobus fulgidus]
>gi|7445709|pir||E69277 branched-chain amino acid ABC
transporter, ATP-binding protein (braG-1) homolog -
Archaeoglobus fulgidus >gi|2650420|gb|AAB91011.1|
(AE001090) branched-chain amino acid ABC transporter,
ATP-binding protein (braG-1) [Archaeoglobus fulgidus]
Length = 224
Score = 105 bits (259), Expect = 6e-22
Identities = 75/239 (31%), Positives = 131/239 (54%), Gaps = 20/239 (8%)
Query: 1 MLKIEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKI 60
+L++E L+ ++LR +++AV++GE ++GPNG+GK+TL +I G + G+I
Sbjct: 3 LLEVERLNAFYGKAQVLRDVSIAVDEGEAVAVLGPNGAGKTTLLNSICGLVR---ADGRI 59
Query: 61 IFNGEDITSSSPDERARKGILLAFQVPPEIEGVRILDFLIQVLTEIKGMKPEEAYDVVLN 120
+F+G DI++ P ER + GI ++ EG R+ + V + D V N
Sbjct: 60 VFDGRDISALKPHERIKLGIAIS------PEGRRLFPEM-SVEDNLLIAGDSNKLDFVYN 112
Query: 121 KAKELWFDDKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSVISR 180
L K+ R+ SGGE++ + + +AL+LEP+LLLLDEP G+ + I+
Sbjct: 113 IFPNL----KEKRKQKAKNLSGGEQQMIAIARALMLEPRLLLLDEPSMGLAPIVVENIAE 168
Query: 181 KIEELHNR-GVSIILITHYGRI-FGHIDKEKLKVHVMKDGKIVKSGGSEIIDMIEREGF 237
+IE + G+SI+L+ ++ F D + +++ G+IV+ G E ++ IE+E F
Sbjct: 169 RIETIKEELGISILLVEQNTQMAFDVAD----RFYILASGQIVREGTIEEMEEIEQEYF 223
>pir||G72687 probable high-affinity branched-chain amino acid transport
ATP-binding protein APE0919 - Aeropyrum pernix (strain
K1) >gi|5104588|dbj|BAA79903.1| (AP000060) 254aa long
hypothetical high-affinity branched-chain amino acid
transport ATP-binding protein [Aeropyrum pernix]
Length = 254
Score = 104 bits (256), Expect = 1e-21
Identities = 71/241 (29%), Positives = 123/241 (50%), Gaps = 27/241 (11%)
Query: 1 MLKIEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKI 60
+L++EDL G L +NL + G+ +++GPNGSGK+TL I+G YK G++
Sbjct: 6 ILRVEDLEKRFGGIVALDKVNLEIERGKVTLLIGPNGSGKTTLVNVISGF--YKPDGGRV 63
Query: 61 IFNGEDITSSSPDERARKGILLAFQVPPEIEGVRILDFLIQVLTEIKGMKPEEAYDVVLN 120
+F G DIT SP E ++ G++ FQ+P + +L+ VLT E Y L
Sbjct: 64 LFKGRDITGMSPHEISKLGLVRTFQIPKPFTNLTVLE---NVLTAADS-PGENVYLAGLA 119
Query: 121 KAKELWFDDKDMRRFVNV---------------GFSGGERKRLELLQALLLEPKLLLLDE 165
+ L F+ + R + SGG+ K LE+ +A++ +++++DE
Sbjct: 120 RRLWLGFEKRAAARAFEILGWVGLDHMWDRRSGELSGGQMKLLEIARAIMKGAEMIIMDE 179
Query: 166 PDSGVDVDSLSVISRKIEEL-HNRGVSIILITH-YGRIFGHIDKEKLKVHVMKDGKIVKS 223
P +GV+ I +I+ L +G++ ++I H G + ++D +V+ M GK++ S
Sbjct: 180 PAAGVNPRLAGSIMERIKYLAREKGITFLIIEHRIGLVKEYVD----RVYAMSMGKVIAS 235
Query: 224 G 224
G
Sbjct: 236 G 236
>pir||E81337 ABC-transporter ATP-binding protein Cj0669 [imported] -
Campylobacter jejuni (strain NCTC 11168)
>gi|6968131|emb|CAB72946.1| (AL139076) ABC-transporter
ATP-binding protein [Campylobacter jejuni]
Length = 242
Score = 103 bits (254), Expect = 2e-21
Identities = 71/228 (31%), Positives = 124/228 (54%), Gaps = 8/228 (3%)
Query: 2 LKIEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKII 61
L+I +L ++ +I+ GI+L VN GE ++GPNG+GK+T I G + GK++
Sbjct: 4 LEIVNLEKIIKKTKIIHGISLEVNSGEVVGLLGPNGAGKTTTFYMICG--LISPSSGKVL 61
Query: 62 FNGEDITSSSPDERARKGILLAFQVPPEIEGVRILDFLIQVLTEIKGMKPEEAYDVVLNK 121
+G D+T ++RAR GI Q + + + D L+ + +I + +D V
Sbjct: 62 LDGLDVTKDPLNKRARSGIGYLPQESSIFKDLSVEDNLL-LAAQIFYKDKKILHDKVEQM 120
Query: 122 AKELWFDDKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSVISRK 181
+ L + +R+ + SGGER+R E+ ++L+ EPK LLLDEP +GVD +++ I
Sbjct: 121 LELLSIEPIRLRK--GLSLSGGERRRCEIARSLMCEPKFLLLDEPFAGVDPIAVAEIQTL 178
Query: 182 IEELHNRGVSIILITHYGRIFGHIDKEKLKVHVMKDGKIVKSGGSEII 229
I+EL G+ +++ H R I + +V++ G ++ SG ++ I
Sbjct: 179 IKELKRLGIGVLITDHNVRETLAICD---RAYVIRSGSLLASGNADEI 223
>gb|AAG37225.1|AF298223_3 (AF298223) glutamine ABC transporter, ATP-binding subunit
[Methanococcus maripaludis]
Length = 243
Score = 102 bits (253), Expect = 3e-21
Identities = 67/244 (27%), Positives = 133/244 (54%), Gaps = 9/244 (3%)
Query: 1 MLKIEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKI 60
M+++ ++H + + +L+G++L V GE VI+GP+GSGKSTL I G K T+G I
Sbjct: 1 MIEMVNIHKKFKEAHVLKGVDLKVAKGEVLVIVGPSGSGKSTLLRCING--LEKTTEGHI 58
Query: 61 IFNGEDITSSSPD-ERARKGILLAFQVPPEIEGVRILDFLIQVLTEIKGMKPEEAYDVVL 119
F G+DIT + + R+ I + FQ + +LD + ++ + +EA ++
Sbjct: 59 FFEGDDITDKKVNINKIRQKIGMVFQQFNLFPHLTVLDNITFAPRKVLNVSKKEAEELAR 118
Query: 120 NKAKELWFDDKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSVIS 179
K++ + K+ + + SGG+++R+ + +AL ++P +L DEP S +D + + +
Sbjct: 119 ELLKKVGLEGKENQ--YPIQLSGGQQQRVAIARALAMKPDAMLFDEPTSALDPELVKEVL 176
Query: 180 RKIEELHNRGVSIILITHYGRIFGHIDKEKLKVHVMKDGKIVKSGG-SEIIDMIEREGFK 238
+++L G++++++TH G + ++ + DG+I++ G S++ + E K
Sbjct: 177 DVMKQLAYEGMTMVVVTHE---MGFAKEVGDRLIFIDDGQILEDGNPSDVFSNPKNERTK 233
Query: 239 AIFG 242
FG
Sbjct: 234 NFFG 237
>sp|P31220|YHBG_ECOLI PROBABLE ABC TRANSPORTER ATP-BINDING PROTEIN IN MURA-RPON
INTERGENIC REGION (ORF1) (ORF241)
>gi|2126052|pir||I60351 rpoN protein - Escherichia coli
>gi|285780|dbj|BAA02314.1| (D12938) ORF1 [Escherichia
coli] >gi|551337|gb|AAB60162.1| (U12684) orf241
[Escherichia coli]
Length = 241
Score = 101 bits (250), Expect = 7e-21
Identities = 73/246 (29%), Positives = 126/246 (50%), Gaps = 13/246 (5%)
Query: 2 LKIEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKII 61
L ++L +GR ++ ++L VN GE ++GPNG+GK+T + G + G II
Sbjct: 4 LTAKNLAKAYKGRRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPARC--GNII 61
Query: 62 FNGEDITSSSPDERARKGILLAFQVPPEIEGVRILDFLIQVLTEIKGMKPEEAYDVVLNK 121
+ +DI+ RAR+GI Q + + D L+ VL + E+ D +
Sbjct: 62 IDDDDISLLPLHARARRGIGYLPQEASIFRRLSVYDNLMAVLQIRDDLSAEQRED----R 117
Query: 122 AKELW--FDDKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSVIS 179
A EL F + +R + SGGER+R+E+ +AL PK +LLDEP +GVD S+ I
Sbjct: 118 ANELMEEFHIEHLRDSMGQSLSGGERRRVEIARALAANPKFILLDEPFAGVDPISVIDIK 177
Query: 180 RKIEELHNRGVSIILITHYGRIFGHIDKEKLKVHVMKDGKIVKSGGSEIIDMIEREGFKA 239
R IE L + G+ +++ H R + + + +++ G ++ G ++++ E K
Sbjct: 178 RIIEHLRDSGLGVLITDHNVRETLAVCE---RAYIVSQGHLIAHGTP--TEILQDEHVKR 232
Query: 240 IFGGEN 245
++ GE+
Sbjct: 233 VYLGED 238
>pir||E71024 probable transport protein - Pyrococcus horikoshii
>gi|3257914|dbj|BAA30597.1| (AP000006) 222aa long
hypothetical transport protein [Pyrococcus horikoshii]
Length = 222
Score = 101 bits (249), Expect = 9e-21
Identities = 67/195 (34%), Positives = 118/195 (60%), Gaps = 14/195 (7%)
Query: 3 KIEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKIIF 62
+ +D+H ++ E+LR ++L + +G +I+GPNGSGKS+L + G ++ ++G++I
Sbjct: 4 QFDDVHKKIGKVEVLRNVSLKIREG-VTLIVGPNGSGKSSLIKLLVGF--WRPSRGRVIL 60
Query: 63 NGEDITSSSPDERARKGILLAFQVPPEIEGVRILDFLIQVLTEIKGMKPEEAYDVVLNKA 122
GED +P + G+ + PP + R LI++L++IKG+K ++
Sbjct: 61 LGED-PWDNPKVKRVIGVSID---PPSLPKYRRGMDLIKILSDIKGVKVKDEL------I 110
Query: 123 KELWFDDKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSVISRKI 182
K L+ D ++R + V +S G RKRL +L ALL E ++L+LDEP SG+D+ +S +S+ I
Sbjct: 111 KRLFPDVSALKRPI-VEYSAGMRKRLSILLALLGENEVLILDEPFSGLDMFGISEVSKVI 169
Query: 183 EELHNRGVSIILITH 197
E GV++I+++H
Sbjct: 170 RERAEVGVNMIIVSH 184
>pir||G69043 cobalt transport ATP-binding protein O - Methanobacterium
thermoautotrophicum (strain Delta H)
>gi|2621173|gb|AAB84639.1| (AE000802) cobalt transport
ATP-binding protein O [Methanobacterium
thermoautotrophicum]
Length = 280
Score = 101 bits (249), Expect = 9e-21
Identities = 74/230 (32%), Positives = 121/230 (52%), Gaps = 21/230 (9%)
Query: 12 EGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKIIFNGEDIT-SS 70
+G E LRGIN GE ++GPNG+GKSTL L G + T GKI+ +GE++ S
Sbjct: 17 DGTEALRGINFHAERGEVVALLGPNGAGKSTLFLHFNGI--LQPTSGKIMIDGEELDYSK 74
Query: 71 SPDERARKGILLAFQVPPEIEGVRILDFLIQVLTEIKGMKPEEAYDVV---LNKAKELWF 127
S +AR+ + + FQ P + +D + G+ +E + V L K L +
Sbjct: 75 SGLIKARQKVGIVFQNPDDQLFAPRVDEDVAFGPLNMGLSEDEVEERVRDALQKVGMLGY 134
Query: 128 DDKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSVISRKIEELHN 187
+ K F SGGE+KR+ + + ++P +++LDEP SG+D S I R + L+
Sbjct: 135 ESKPPHHF-----SGGEKKRVAIAGIIAMKPDIMVLDEPTSGLDPRGASQILRLLHNLNE 189
Query: 188 RGVSIILITHYGRIFGHIDKEKL---KVHVMKDGKIVKSGG-SEIIDMIE 233
G++II+ TH +D L +++++ DG+I+ +G SE+ I+
Sbjct: 190 EGMTIIISTH------DVDLAPLYSDRIYIISDGEIISTGAPSEVFSDID 233
>sp|P33982|YHBG_AZOCA PROBABLE ABC TRANSPORTER ATP-BINDING PROTEIN IN NTRA/RPON 5'REGION
(ORF1) >gi|479374|pir||S33579 hypothetical protein 1 -
Azorhizobium caulinodans >gi|311388|emb|CAA49581.1|
(X69959) ORF1 [Azorhizobium caulinodans]
Length = 281
Score = 101 bits (248), Expect = 1e-20
Identities = 69/220 (31%), Positives = 113/220 (51%), Gaps = 14/220 (6%)
Query: 13 GREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKIIFNGEDITSSSP 72
GR+++R ++L V GE ++GPNG+GK+T+ I G K +G+I +G D+T
Sbjct: 56 GRKVVRDVSLDVRRGEAVGLLGPNGAGKTTVFYMITG--LVKADQGRIELDGHDVTPMPM 113
Query: 73 DERARKGILLAFQVPPEIEGVRILDFLIQVL--TEIKGMKPEEAYDVVLNKAKELWFDDK 130
RAR GI Q G+ + D + VL TE + E D +L + F
Sbjct: 114 YRRARLGIGYLPQEASIFRGLSVEDNIGAVLEITEPNRKRRAEELDALLEE-----FKIT 168
Query: 131 DMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSVISRKIEELHNRGV 190
+R+ ++ SGGER+R+E+ +AL P +LLDEP +G+D ++ I + L RG+
Sbjct: 169 HVRKSPSIALSGGERRRVEIARALASRPAFMLLDEPFAGIDPIAVGDIQALVRHLTTRGI 228
Query: 191 SIILITHYGR-IFGHIDKEKLKVHVMKDGKIVKSGGSEII 229
+++ H R G ID + +++ G ++ G E I
Sbjct: 229 GVLITDHNVRETLGLID----RAYIIHSGTVLMEGDPESI 264
>pir||C65111 probable ABC transporter (ntrA/rpoN 5'region) - Escherichia coli
(strain K-12) >gi|606140|gb|AAA58003.1| (U18997)
ORF_o241 [Escherichia coli] >gi|1789593|gb|AAC76233.1|
(AE000399) putative ATP-binding component of a transport
system [Escherichia coli K12]
Length = 241
Score = 101 bits (248), Expect = 1e-20
Identities = 73/246 (29%), Positives = 125/246 (50%), Gaps = 13/246 (5%)
Query: 2 LKIEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKII 61
L ++L +GR ++ ++L VN GE ++GPNG+GK+T + G G II
Sbjct: 4 LTAKNLAKAYKGRRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDA--GNII 61
Query: 62 FNGEDITSSSPDERARKGILLAFQVPPEIEGVRILDFLIQVLTEIKGMKPEEAYDVVLNK 121
+ +DI+ RAR+GI Q + + D L+ VL + E+ D +
Sbjct: 62 IDDDDISLLPLHARARRGIGYLPQEASIFRRLSVYDNLMAVLQIRDDLSAEQRED----R 117
Query: 122 AKELW--FDDKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSVIS 179
A EL F + +R + SGGER+R+E+ +AL PK +LLDEP +GVD S+ I
Sbjct: 118 ANELMEEFHIEHLRDSMGQSLSGGERRRVEIARALAANPKFILLDEPFAGVDPISVIDIK 177
Query: 180 RKIEELHNRGVSIILITHYGRIFGHIDKEKLKVHVMKDGKIVKSGGSEIIDMIEREGFKA 239
R IE L + G+ +++ H R + + + +++ G ++ G ++++ E K
Sbjct: 178 RIIEHLRDSGLGVLITDHNVRETLAVCE---RAYIVSQGHLIAHGTP--TEILQDEHVKR 232
Query: 240 IFGGEN 245
++ GE+
Sbjct: 233 VYLGED 238
>sp|P25885|YHBG_RHIME PROBABLE ABC TRANSPORTER ATP-BINDING PROTEIN IN NTRA/RPON 5'REGION
>gi|95203|pir||B32835 hypothetical ntrA protein 2 (ntrA
5' region) - Rhizobium meliloti
>gi|511887|gb|AAA26348.1| (M24926) ATP-binding protein
[Sinorhizobium meliloti]
Length = 270
Score = 100 bits (247), Expect = 2e-20
Identities = 72/235 (30%), Positives = 122/235 (51%), Gaps = 16/235 (6%)
Query: 14 REILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKIIFNGEDITSSSPD 73
R ++ G++L V GE ++GPNG+GK+T I G V +G I NG D+T+
Sbjct: 46 RRVVNGVSLVVRRGEAVGLLGPNGAGKTTCFYMITG--LVPVDEGSIEINGNDVTTMPMY 103
Query: 74 ERARKGILLAFQVPPEIEGVRILDFLIQVLTEIKGMKPEEAYDVVLNKAKELW--FDDKD 131
RAR G+ Q G+ + D + VL E+ +E D +K +L F
Sbjct: 104 RRARLGVGYLPQEASIFRGLTVEDNIRAVL-EVH----DENVDRRESKLNDLLGEFSITH 158
Query: 132 MRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSVISRKIEELHNRGVS 191
+R+ + SGGER+RLE+ +AL +P +LLDEP +GVD S++ I + L +RG+
Sbjct: 159 LRKSPAIALSGGERRRLEIARALATDPTFMLLDEPFAGVDPISVADIQALVRHLTSRGIG 218
Query: 192 IILITHYGR-IFGHIDKEKLKVHVMKDGKIVKSGGSEIIDMIEREGFKAIFGGEN 245
+++ H R G ID + +++ G+++ G + D++ + ++ G+N
Sbjct: 219 VLITDHNVRETLGLID----RAYIIHAGEVLTHGRAN--DIVTNPDVRRLYLGDN 267
>pir||E82065 ABC transporter, ATP-binding protein VC2528 [imported] - Vibrio
cholerae (group O1 strain N16961)
>gi|2317737|gb|AAC46369.1| (AF013987) putative ABC
transporter ATP-binding protein [Vibrio cholerae]
>gi|9657111|gb|AAF95669.1| (AE004322) ABC transporter,
ATP-binding protein [Vibrio cholerae]
Length = 241
Score = 100 bits (247), Expect = 2e-20
Identities = 69/244 (28%), Positives = 126/244 (51%), Gaps = 9/244 (3%)
Query: 1 MLKIEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKI 60
+LK + L + R+++ ++L V G+ ++GPNG+GK+T I G +G I
Sbjct: 3 ILKAQHLAKSYKKRKVVSDVSLQVESGQIVGLLGPNGAGKTTSFYMIVG--LVARDEGTI 60
Query: 61 IFNGEDITSSSPDERARKGILLAFQVPPEIEGVRILDFLIQVLTEIKGMKPEEAYDVVLN 120
+ DI+ R+R GI Q + + D ++ VL + + EE D + +
Sbjct: 61 TIDDNDISILPMHSRSRMGIGYLPQEASIFRKLSVEDNIMAVLQTREELTHEERQDKLED 120
Query: 121 KAKELWFDDKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSVISR 180
+E F + +R+ + SGGER+R+E+ +AL P+ +LLDEP +GVD S+ I +
Sbjct: 121 LLEE--FHIQHIRKSAGMALSGGERRRVEIARALAANPQFILLDEPFAGVDPISVIDIKK 178
Query: 181 KIEELHNRGVSIILITHYGRIFGHIDKEKLKVHVMKDGKIVKSGGSEIIDMIEREGFKAI 240
IE L +RG+ +++ H R + + K +++ G+++ G + D++ E K +
Sbjct: 179 IIEHLRDRGLGVLITDHNVRETLDVCE---KAYIVSQGRLIAEGTPQ--DVLNNEQVKQV 233
Query: 241 FGGE 244
+ GE
Sbjct: 234 YLGE 237
>emb|CAA11111.1| (AJ223088) hypothetical protein [Pseudomonas stutzeri]
Length = 241
Score = 100 bits (247), Expect = 2e-20
Identities = 63/229 (27%), Positives = 117/229 (50%), Gaps = 7/229 (3%)
Query: 1 MLKIEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKI 60
+LK + L + R+++R ++L++ G+ ++GPNG+GK+T IAG +G++
Sbjct: 3 VLKAQHLAKSYKSRQVVRDVSLSIESGQIVGLLGPNGAGKTTCFYMIAG--LVNADQGRV 60
Query: 61 IFNGEDITSSSPDERARKGILLAFQVPPEIEGVRILDFLIQVLTEIKGMKPEEAYDVVLN 120
+ + D+T RAR GI Q + + D ++ +L K + +
Sbjct: 61 LIDQNDVTHLPMHGRARAGIGYLPQEASIFRKLSVADNIMAILETRKDLDRSGRQQALEG 120
Query: 121 KAKELWFDDKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSVISR 180
+E F +R + + SGGER+R+E+ +AL PK +LLDEP +GVD S+ I +
Sbjct: 121 LLQE--FHINHIRNSLGMSLSGGERRRVEIARALATAPKFILLDEPFAGVDPISVGDIKQ 178
Query: 181 KIEELHNRGVSIILITHYGRIFGHIDKEKLKVHVMKDGKIVKSGGSEII 229
I L +G+ +++ H R I + +++ DG+++ G ++ I
Sbjct: 179 IIHHLKAKGIGVLITDHNVRETLDICE---TAYIVNDGQLIAEGDAQTI 224
>gi|11498429 branched-chain amino acid ABC transporter, ATP-binding protein
(braG-2) [Archaeoglobus fulgidus]
>gi|7445760|pir||G69352 branched-chain amino acid ABC
transporter, ATP-binding protein (braG-2) homolog -
Archaeoglobus fulgidus >gi|2649778|gb|AAB90412.1|
(AE001047) branched-chain amino acid ABC transporter,
ATP-binding protein (braG-2) [Archaeoglobus fulgidus]
Length = 248
Score = 99.8 bits (245), Expect = 3e-20
Identities = 82/253 (32%), Positives = 125/253 (48%), Gaps = 16/253 (6%)
Query: 1 MLKIEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKI 60
MLK+E + + G L + + GE I+GPNG+GK+TL I+G YK +G I
Sbjct: 1 MLKVEGVGIRFGGLIALNNVTFEIRKGEVLGIIGPNGAGKTTLFNVISG--LYKPDEGVI 58
Query: 61 IFNGEDITSSSPDERARKGILLAFQVPPEIEGVRILDFLIQVLTE-----IKGMKPEEAY 115
IF G++IT+ P + R GI FQ + + L+ LT + EE
Sbjct: 59 IFEGKNITTMPPHKIVRLGISRTFQTVSLYFNLPAIGNLLITLTAWYRSGVLSALREENG 118
Query: 116 DVVLNKAKELW-FDDKDMRRFVNVGFSGGE-RKRLELLQALLLEPKLLLLDEPDSGVDVD 173
D +A EL F D + F V E ++RL + AL +PKLLLLDEP +G++++
Sbjct: 119 DETFKEAMELLNFVGLDEKAFTPVKNLPQEAQRRLSIAIALATKPKLLLLDEPTAGLNLE 178
Query: 174 SLSVISRKIEELHNRGVSIILITHYGR-IFGHIDKEKLKVHVMKDGKIVKSGGSEIIDMI 232
I I L RGV++ +I H R I G D ++ V+ G+I+ G + +++
Sbjct: 179 ETDRILEIIRTLKERGVTVAIIEHKMRFIMGVSD----RIVVLDSGEIIAEGSPK--EIV 232
Query: 233 EREGFKAIFGGEN 245
E E + GE+
Sbjct: 233 ENERVIKAYLGES 245
>gb|AAF81686.1|AF233069_9 (AF233069) unknown [Galdieria sulphuraria]
Length = 239
Score = 99.8 bits (245), Expect = 3e-20
Identities = 73/235 (31%), Positives = 124/235 (52%), Gaps = 20/235 (8%)
Query: 16 ILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKIIFNGEDITSSSPDER 75
IL +++ + E ++GPNG+GK+++ I G K KGK++ NG DIT+ +R
Sbjct: 17 ILDNLHMTFSQYEILGLLGPNGTGKTSIFKLITGISK--PDKGKVLLNGGDITNVPMHQR 74
Query: 76 ARKGILLAFQVPPEIEGVRILDFLIQVLTEIKGMKPEEAYDVVLNKAKELWFD-DKDMRR 134
AR GI +P E R L + ++ M +A + + K+ +F DK +
Sbjct: 75 ARLGICY---LPQESSVFRRLTVKENLKLALEEMGYSDAIESSIIKSFTSYFQIDKTLHT 131
Query: 135 FVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSVISRKIEELHNRGVSIIL 194
F + SGGER++LE+ +A++++PK LLLDEP +G+D S+S + I L+N G+ I++
Sbjct: 132 FGSY-ISGGERRKLEIARAVIIKPKFLLLDEPFAGIDPISISELQEIIVNLNNSGIGILI 190
Query: 195 ITHYGRIFGHIDKEKLKV----HVMKDGKIVKSGGSEIIDMIEREGFKAIFGGEN 245
H R E LK+ +++ I+ SG + +IE + + + G N
Sbjct: 191 TDHNVR-------ETLKITHRSYILSGTNILASGTTR--QLIENKAVRESYLGNN 236
>sp|P24693|YHBG_THIFE PROBABLE ABC TRANSPORTER ATP-BINDING PROTEIN IN NTRA/RPON 5'REGION
(ORF1) >gi|97388|pir||A37761 hypothetical protein 1
(ntrA 5' region) - Thiobacillus ferrooxidans
>gi|154643|gb|AAA27378.1| (M58480) 5' end potential;
putative [Acidithiobacillus ferrooxidans]
Length = 241
Score = 99.1 bits (243), Expect = 5e-20
Identities = 70/231 (30%), Positives = 117/231 (50%), Gaps = 9/231 (3%)
Query: 1 MLKIEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKI 60
+L+ + L R ++R +++ V GE ++GPNG+GK+T + G + +G I
Sbjct: 4 LLQAQSLFKSYRRRVVVRDVSVQVATGEVVGLLGPNGAGKTTTFYMMVG--LVRPDRGHI 61
Query: 61 IFNGEDITSSSPDERARKGILLAFQVPPEIEGVRILDFLIQVLTEIKGMKPEEAYDVVLN 120
DIT+ ERAR G+ Q P + D ++ VL E + P E +
Sbjct: 62 FLQQRDITALPMHERARMGLGYLPQEPSVFRQMSAADNVLAVL-ETLPLSPVERQERQEQ 120
Query: 121 KAKELWFDDKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSVISR 180
EL +R SGGER+R+E+ +AL + P+ +LLDEP +G+D S+ I R
Sbjct: 121 LLSELHLHA--LRDTKGHSLSGGERRRVEIARALAMSPRFILLDEPFAGIDPISVLEIQR 178
Query: 181 KIEELHNRGVSIILITHYGRIFGHIDKEKLKVHVMKDGKIVKSGG-SEIID 230
I +L RG+ +++ H R I + + +++ DGK++ +G EI+D
Sbjct: 179 LIRDLRARGIGVLITDHNVRETLGICE---RAYILHDGKVLTAGSPQEIVD 226
>gi|11498996 iron (III) ABC transporter, ATP-binding protein (hemV-3)
[Archaeoglobus fulgidus] >gi|7430360|pir||H69424
probable iron(III) ABC transporter hemV-3 -
Archaeoglobus fulgidus >gi|2649168|gb|AAB89842.1|
(AE001007) iron (III) ABC transporter, ATP-binding
protein (hemV-3) [Archaeoglobus fulgidus]
Length = 405
Score = 99.1 bits (243), Expect = 5e-20
Identities = 71/248 (28%), Positives = 129/248 (51%), Gaps = 16/248 (6%)
Query: 2 LKIEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKII 61
L ++ + V++ RE+L+ + V +GE ++GPNGSGK+T+ TI G K KG ++
Sbjct: 3 LVVKGVSVKLGSREVLKDVTFEVGEGELLALLGPNGSGKTTMLRTIFG--MLKPLKGVVL 60
Query: 62 FNGEDITSSSPDERARKGILLAFQVPPEIEGVRILDFLIQVLTE-IKGMK--PEEAYDVV 118
+G ++ S +E ARK L P + ++++D ++ T + G+K EE Y
Sbjct: 61 LDGREV--GSAEEAARKLGFLPQDTP--MTNLKVIDVVMLGRTPYLSGLKRPKEEDYRAA 116
Query: 119 LNKAKELWFDDKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSVI 178
+ KE+ + R F + SGGER+++ L + +P+++LLDEP + +D+ + I
Sbjct: 117 MEALKEVGMEKMADRLFSEL--SGGERQKVMLARVFAQQPEIMLLDEPTAHLDIAAQIEI 174
Query: 179 SRKIEELHNRGVSIILITHYGRIFGHIDKEKLKVHVMKDGKIVKSGGSEIIDMIEREGFK 238
+ +G + I+ H + K+ ++KDG +V +G E D+I E +
Sbjct: 175 MEIVRSKVEQGKAAIVAIHDINLASSF---ATKILMVKDGVVVYAGRPE--DVITEESIR 229
Query: 239 AIFGGENV 246
+FG + V
Sbjct: 230 DVFGADVV 237
>gb|AAB20257.1| (S63858) orf 5' of rpoN [Rhizobium, NGR234, Peptide, 270 aa]
>gi|228369|prf||1803249A rpoN upstream ORF 1 [Rhizobium
sp.]
Length = 270
Score = 99.1 bits (243), Expect = 5e-20
Identities = 69/233 (29%), Positives = 120/233 (50%), Gaps = 12/233 (5%)
Query: 14 REILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKIIFNGEDITSSSPD 73
R ++ G++L V GE ++GPNG+GK+T I G V +G I NG D+T+
Sbjct: 46 RRVVNGVSLVVRRGEAVGLLGPNGAGKTTCFYMITG--LVPVDEGSIEINGNDVTTMPMY 103
Query: 74 ERARKGILLAFQVPPEIEGVRILDFLIQVLTEIKGMKPEEAYDVVLNKAKELWFDDKDMR 133
RAR G+ Q + G+ + + + VL EI + + + E F +R
Sbjct: 104 RRARLGVGYLPQEASILRGLTVEENIRAVL-EIHDKNVDRRESKLNDLLGE--FSITHLR 160
Query: 134 RFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSVISRKIEELHNRGVSII 193
+ + SGGER+RLE+ +AL +P +LLDEP +GVD S++ I + L +RG+ ++
Sbjct: 161 KSPAIALSGGERRRLEIARALATDPTFMLLDEPFAGVDPISVADIQALVRHLTSRGIGVL 220
Query: 194 LITHYGR-IFGHIDKEKLKVHVMKDGKIVKSGGSEIIDMIEREGFKAIFGGEN 245
+ H R G ID + +++ G+++ G + D++ + ++ G+N
Sbjct: 221 ITDHNVRETLGLID----RAYIIHAGEVLTHGRAN--DIVTNPDVRRLYLGDN 267
>pir||A71243 probable maltose/maltodextrin transport ATP-binding protein -
Pyrococcus horikoshii >gi|3256589|dbj|BAA29272.1|
(AP000001) 362aa long hypothetical maltose/maltodextrin
transport ATP-binding protein [Pyrococcus horikoshii]
Length = 362
Score = 98.7 bits (242), Expect = 6e-20
Identities = 67/225 (29%), Positives = 121/225 (53%), Gaps = 14/225 (6%)
Query: 2 LKIEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKII 61
+K+E++ + L INL + DGEF ++GP+GSGKSTL TIAG YK T GKI
Sbjct: 4 IKLENIVKKFGNFTALNNINLKIKDGEFMALLGPSGSGKSTLLYTIAG--IYKPTSGKIY 61
Query: 62 FNGEDITSSSPDERARKGILLAFQVPPEIEGVRILDFLIQVLTEIKGMKPEEAYDVVLNK 121
F+ +D+T P +R + + + P + + + F +++ P E D + +
Sbjct: 62 FDEKDVTELPPKDRNVGLVFQNWALYPHMTVYKNIAFPLEL-----RKAPREEIDKKVRE 116
Query: 122 AKELWFDDKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSVISRK 181
++ DK + R+ SGG+++R+ + +AL+ EP++LLLDEP S +D + +
Sbjct: 117 VAKMLHIDKLLNRY-PWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAE 175
Query: 182 IEELHNR-GVSIILITH-YGRIFGHIDKEKLKVHVMKDGKIVKSG 224
++ L G++ + +TH D ++ V+++G+I++ G
Sbjct: 176 LKRLQKELGITTVYVTHDQAEALAMAD----RIAVIREGEILQVG 216
>pir||H75161 ribose abc transporter, ATP-binding protein (rbsa) PAB0303 -
Pyrococcus abyssi (strain Orsay)
>gi|5457885|emb|CAB49375.1| (AJ248284) ribose ABC
transporter, ATP-binding protein (rbsA) [Pyrococcus
abyssi]
Length = 498
Score = 98.7 bits (242), Expect = 6e-20
Identities = 68/225 (30%), Positives = 123/225 (54%), Gaps = 10/225 (4%)
Query: 12 EGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKIIFNGEDITSSS 71
+G LRG+NL V +GE H ++G NG+GKSTL + G + K TKG+I G++++ +
Sbjct: 15 DGVVALRGVNLKVEEGEIHGLLGENGAGKSTLMRILYG--EIKPTKGEIKVFGKEVSFNG 72
Query: 72 PDERARKGILLAFQVPPEIEGVRILDFLIQVLTEIK-GMKPEEAYDVVLNKAKELWFDDK 130
P + R+GI + +Q + +L+ L + I G+K + + K +E+ F+
Sbjct: 73 PWDAIREGIAMVYQHFTLVPTFTVLENLYLAMLSINPGIKISDVEKLAKEKMREVGFE-V 131
Query: 131 DMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSVISRKIEELHNRGV 190
+ V G ++R+E+++AL+L K+L+LDEP S + + + + + L RG+
Sbjct: 132 PLNEIVE-DLPVGIQQRVEIIKALMLNAKILILDEPTSVLTPIEVKELFKTLRNLKERGI 190
Query: 191 SIILITHYGRIFGHIDKEKLKVHVMKDGKIVKSGGSEIIDMIERE 235
++I ITH + I +V V++ G++V G + ++ ERE
Sbjct: 191 TVIFITHKLKEVKEITD---RVTVLRRGEVV--GTVKTSEVSERE 230
Score = 71.0 bits (171), Expect = 1e-11
Identities = 70/259 (27%), Positives = 125/259 (48%), Gaps = 30/259 (11%)
Query: 1 MLKIEDLHVEVE-GREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGK 59
+LK+EDL V+ + G + ++G++ + +GE I G G+G+ LA +AG + KGK
Sbjct: 255 ILKVEDLWVKDDRGLDAVKGVSFELREGEILGIAGVQGNGQRELAEALAGIRIPE--KGK 312
Query: 60 IIFNGEDITSSSPDERARKGILLAFQVPPEIEGVRILDFLIQ---VLTEIKGM------- 109
I G+D+T ER + G+ VP +LD + VLT + +
Sbjct: 313 IELLGKDVTKLPAHERYKSGLAY---VPDSRRVGLVLDMNVVENVVLTNLSRVLHKGRIS 369
Query: 110 --KPEEAYDVVLNKAKELWFDDKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPD 167
K E + V+ K + L K + + SGG ++++ + + ++ EPK++++ EP
Sbjct: 370 WDKANEMTNEVVEKFEVLLSSTKAPIKHL----SGGNQQKVMVGREIIREPKVIVVSEPT 425
Query: 168 SGVDVDSLSVISRKIEELHNRGVSIILI-THYGRIFGHIDKEKLKVHVMKDGKIVKSGGS 226
G+D+ + I + + +L + I+LI T I D +V V+ +GKI+ G +
Sbjct: 426 QGLDIGATEFIRKTLLKLRDERKGILLISTDLDEILQLSD----RVAVIYEGKIMSIGKT 481
Query: 227 EIIDMIEREGFKAIFGGEN 245
E + E + GG N
Sbjct: 482 EEFTL---EKLGLLMGGVN 497
>gi|11498288 glutamine ABC transporter, ATP-binding protein (glnQ)
[Archaeoglobus fulgidus] >gi|7442524|pir||H69334
glutamine transport protein glnQ - Archaeoglobus
fulgidus >gi|2649950|gb|AAB90561.1| (AE001058) glutamine
ABC transporter, ATP-binding protein (glnQ)
[Archaeoglobus fulgidus]
Length = 242
Score = 98.3 bits (241), Expect = 8e-20
Identities = 70/229 (30%), Positives = 122/229 (52%), Gaps = 8/229 (3%)
Query: 2 LKIEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKII 61
L+I DLH E+L+G+ + V GE VI+GP+GSGKSTL I + + T GKI+
Sbjct: 4 LEIIDLHKRFGELEVLKGVTMKVEKGEVVVIIGPSGSGKSTLLRCI--NRLEEPTSGKIL 61
Query: 62 FNGEDITSSSPD-ERARKGILLAFQVPPEIEGVRILDFLIQVLTEIKGMKPEEAYDVVLN 120
+G DIT+S D + R+ I + FQ + L + +IK M EA ++ +
Sbjct: 62 LDGVDITNSKIDINKVRQRIGIVFQQFNLFPHLTALQNVTLAPIKIKKMSKREAEELGMR 121
Query: 121 KAKELWFDDKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSVISR 180
+++ +DK + SGG+++R+ + +AL + P+++L DE S +D + + +
Sbjct: 122 LLEKVGLEDK--ADYYPAQLSGGQQQRVAIARALAMNPEVMLFDEVTSALDPELVKEVLD 179
Query: 181 KIEELHNRGVSIILITHYGRIFGHIDKEKLKVHVMKDGKIVKSGGSEII 229
+++L G++++++TH G + +V M G IV+ G E I
Sbjct: 180 VMKQLARDGMTMVVVTHE---MGFAREVGDRVIFMDGGVIVEEGKPEQI 225
>pir||B64458 high-affinity branched-chain amino acid transport ATP-binding
protein homolog - Methanococcus jannaschii
>gi|1591902|gb|AAB99273.1| (U67567) high-affinity
branched-chain amino acid transport ATP-binding protein
(braF) [Methanococcus jannaschii]
Length = 257
Score = 98.3 bits (241), Expect = 8e-20
Identities = 69/224 (30%), Positives = 119/224 (52%), Gaps = 21/224 (9%)
Query: 17 LRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKIIFNGEDITSSSPDERA 76
L G++++VN G+ +I+GPNGSGKSTL I G K +G++ F +DIT+ P E
Sbjct: 23 LDGVSISVNKGDVTLIIGPNGSGKSTLINVITGF--LKADEGRVYFENKDITNKEPAELY 80
Query: 77 RKGILLAFQVPPEIEGVRILDFLIQVLTEIK-GMKPEEA--YDVVLNKAKELWFDDKDMR 133
GI+ FQ P ++ + +L+ L+ + EI G P + Y + K +E+ +
Sbjct: 81 HYGIVRTFQTPQPLKEMTVLENLL--IGEINPGESPLNSLFYKKWIPKEEEMVEKAFKIL 138
Query: 134 RFVNVG---------FSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSVISRKIEE 184
F+ + SGG+ K +E+ +AL+ PK++++DEP +GV I + E
Sbjct: 139 EFLKLSHLYDRKAGELSGGQMKLVEIGRALMTNPKMIVMDEPIAGVAPGLAHDIFNHVLE 198
Query: 185 LHNRGVSIILITH-YGRIFGHIDKEKLKVHVMKDGKIVKSGGSE 227
L +G++ ++I H + +ID ++VM +G+I+ G E
Sbjct: 199 LKAKGITFLIIEHRLDIVLNYID----HLYVMFNGQIIAEGRGE 238
>pir||B70483 ABC transporter - Aquifex aeolicus >gi|2984332|gb|AAC07853.1|
(AE000774) ABC transporter [Aquifex aeolicus]
Length = 253
Score = 96.3 bits (236), Expect = 3e-19
Identities = 70/233 (30%), Positives = 123/233 (52%), Gaps = 8/233 (3%)
Query: 1 MLKIEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKI 60
++++E ++ E+EGR IL+ +N +V GE I+G +GSGK+++ I G +K TKGK+
Sbjct: 4 VVRLEHIYKEIEGRVILKDVNFSVYKGEIFSIIGGSGSGKTSITKLIVG--LWKPTKGKV 61
Query: 61 IFNGEDITSSSPDE--RARKGILLAFQVPPEIEGVRILDFLIQVLTEIKGMKPEEAYDVV 118
+ +++ S E RK I FQ + R+ + ++ E EE +
Sbjct: 62 LVFRKNVPELSGLELDELRKNIGYVFQEGALFDSYRVWENVVFYYLEHGKHNKEELRKMA 121
Query: 119 LNKAKELWFDDKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSVI 178
L K + D+ + + + F GG RKR+ + +A+ P+L++ DEP SG+D + VI
Sbjct: 122 LENLKLVNVDESVLDLYPSELF-GGMRKRVAIARAIATRPQLIIYDEPTSGLDPITSRVI 180
Query: 179 SRKIEELHNRGVSIILITHYGRIFGHIDKEKLKVHVMKDGKIVKSG-GSEIID 230
+ I EL N+ + L+ + I + +V V+K+G+I+ G E+ID
Sbjct: 181 DKLILELRNKTGTTSLVVTHDMISAFTISD--RVMVIKNGEIIAIGKPDEVID 231
>gb|AAA80299.1| (U23471) ABC-type permease homolog [Rhizobium leguminosarum bv.
phaseoli]
Length = 258
Score = 95.6 bits (234), Expect = 5e-19
Identities = 69/233 (29%), Positives = 122/233 (51%), Gaps = 12/233 (5%)
Query: 14 REILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKIIFNGEDITSSSPD 73
R ++ G++L V GE ++GPNG+GK+T I G V +G I +G D+T+
Sbjct: 34 RRVVNGVSLVVRRGEAVGLLGPNGAGKTTCFYMITG--LVPVDEGTIEIDGNDVTTMPMY 91
Query: 74 ERARKGILLAFQVPPEIEGVRILDFLIQVLTEIKGMKPEEAYDVVLNKAKELWFDDKDMR 133
R+R G+ Q G+ + + + VL E+ +K + + LN+ E + K +R
Sbjct: 92 RRSRLGVGYLPQEASIFRGLTVEENIRAVL-EVH-VKDKAEREQKLNELLEEFHIQK-LR 148
Query: 134 RFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSVISRKIEELHNRGVSII 193
+ V S GER+RLE+ +AL +P +LLDEP +GVD S++ I + L RG+ ++
Sbjct: 149 KSAAVALSAGERRRLEIARALATDPTFMLLDEPFAGVDPISVADIQNLVHHLTARGIGVL 208
Query: 194 LITHYGR-IFGHIDKEKLKVHVMKDGKIVKSGGSEIIDMIEREGFKAIFGGEN 245
+ H R G ID + +++ G+++ G + D++ + ++ G+N
Sbjct: 209 ITDHNVRETLGLID----RAYIIHAGEVLTHGRAN--DIVNNPEVRRLYLGDN 255
>pir||D69627 cell-division ATP-binding protein ftsE - Bacillus subtilis
>gi|2618833|gb|AAC67262.1| (AF017113) cell division
ATP-binding protein [Bacillus subtilis]
>gi|2636052|emb|CAB15543.1| (Z99122) cell-division
ATP-binding protein [Bacillus subtilis]
Length = 228
Score = 95.6 bits (234), Expect = 5e-19
Identities = 62/218 (28%), Positives = 121/218 (55%), Gaps = 22/218 (10%)
Query: 13 GREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKIIFNGEDITSSSP 72
G + L GI++ ++ GEF ++GP+G+GKST I + + K TKG+I+ N +D+ +
Sbjct: 14 GVKALNGISVTIHPGEFVYVVGPSGAGKSTFIKMI--YREEKPTKGQILINHKDLATIKE 71
Query: 73 DE----RARKGILLA-FQVPPEIEGVRILDFLIQVLTEIKGMKPE---EAYDVVLNKAKE 124
E R + G++ F++ P++ + F ++V+ E + + E D+V K K
Sbjct: 72 KEIPFVRRKIGVVFQDFKLLPKLTVFENVAFALEVIGEQPSVIKKRVLEVLDLVQLKHKA 131
Query: 125 LWFDDKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSVISRKIEE 184
F D+ SGGE++R+ + ++++ P +++ DEP +D D+ + + +EE
Sbjct: 132 RQFPDQ---------LSGGEQQRVSIARSIVNNPDVVIADEPTGNLDPDTSWEVMKTLEE 182
Query: 185 LHNRGVSIILITHYGRIFGHIDKEKLKVHVMKDGKIVK 222
++NRG ++++ TH I ++ K +V ++DG IV+
Sbjct: 183 INNRGTTVVMATHNKEI---VNTMKKRVIAIEDGIIVR 217
>gi|11497838 branched-chain amino acid ABC transporter, ATP-binding protein
(braF-1) [Archaeoglobus fulgidus]
>gi|7445740|pir||F69277 branched-chain amino acid ABC
transporter, ATP-binding protein (braF-1) homolog -
Archaeoglobus fulgidus >gi|2650419|gb|AAB91010.1|
(AE001090) branched-chain amino acid ABC transporter,
ATP-binding protein (braF-1) [Archaeoglobus fulgidus]
Length = 281
Score = 95.2 bits (233), Expect = 7e-19
Identities = 67/227 (29%), Positives = 112/227 (48%), Gaps = 20/227 (8%)
Query: 1 MLKIEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKI 60
MLK+ ++H +L G+NL ++ E I+GPNG+GK+TL I G K +G+I
Sbjct: 55 MLKVRNVHKRFGECSVLEGVNLEIDKSERVGIIGPNGAGKTTLFNIITGF--LKPDRGEI 112
Query: 61 IFNGEDITSSSPDERARKGILLAFQVPPEIEGVRILDFLIQVLTEIKGMKPEEAYDVVLN 120
F DIT P++ A+ GI+ FQ+ + + ++ V ++ ++
Sbjct: 113 RFRSRDITGLKPNQLAKMGIVRTFQIVKVFSNMTVEQNMLTVSDDLDYLREFG------- 165
Query: 121 KAKELWFDDKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSVISR 180
LW + R + S GE ++L + AL PKLLLLDEP SG+ ++
Sbjct: 166 ----LW----EKRHELAANLSYGELRKLSIALALAPNPKLLLLDEPFSGLSPKEARDLAG 217
Query: 181 KIEELHNRGVSIILITHYGRIFGHIDKEKLKVHVMKDGKIVKSGGSE 227
IE +++ G SI +I H + ++ + +V V+ G+I+ G E
Sbjct: 218 IIESINHNGQSIAIIEHRLKDLFNVAE---RVVVLNSGRIIFEGHPE 261
>pir||F71654 ABC transporter ATP-binding protein (abcT2) RP508 - Rickettsia
prowazekii >gi|3861060|emb|CAA14960.1| (AJ235272) ABC
TRANSPORTER ATP-BINDING PROTEIN (abcT2) [Rickettsia
prowazekii]
Length = 254
Score = 95.2 bits (233), Expect = 7e-19
Identities = 71/247 (28%), Positives = 127/247 (50%), Gaps = 16/247 (6%)
Query: 2 LKIEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKII 61
L+I+++ + R IL I+L + GE + GPNG+GK+T I G + G+++
Sbjct: 18 LQIKNISKSYKKRNILTDISLHIKQGEIVGLFGPNGAGKTTCFNIIIG--LMRPDSGQLL 75
Query: 62 FNGEDITSSSPDERARKGILLAFQVPPEIEGVRILDFLIQVLTEIKGMKPEEAYDVVLNK 121
N +IT+ RAR GI Q P G+ + D I+ + EI E +V+ K
Sbjct: 76 LNDINITNLPIYLRARLGIGYLLQEPSIFRGLSVADN-IKAVVEIS----ENDKEVIEQK 130
Query: 122 AKELW--FDDKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSVIS 179
L F ++ + SGGER+RLE+ ++ ++EPK ++LDEP +G+D ++S I
Sbjct: 131 THNLLEKFSIVHLKDLSSASLSGGERRRLEIARSFVIEPKFIMLDEPLAGIDPLAISDIK 190
Query: 180 RKIEELHNRGVSIILITHYGR-IFGHIDKEKLKVHVMKDGKIVKSGGSEIIDMIEREGFK 238
+ I L + I++ H R +D + +V+ +GK++ G ++ ++ + K
Sbjct: 191 KLITYLREFNIGILITDHNVRDTLDIVD----RAYVIFEGKVLLEGSAQ--EIANSKKVK 244
Query: 239 AIFGGEN 245
++ GE+
Sbjct: 245 EVYLGES 251
>emb|CAB95741.1| (AJ276960) putative ABC transporter [Staphylococcus xylosus]
Length = 257
Score = 95.2 bits (233), Expect = 7e-19
Identities = 62/209 (29%), Positives = 110/209 (51%), Gaps = 26/209 (12%)
Query: 1 MLKIEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKI 60
+ +++++ + +++L IN+ +N GEF I+GPNG+GKSTL I G + KG+I
Sbjct: 5 VFELKNIDYYFDNKQVLENINIKINRGEFVAIVGPNGAGKSTLLKIILG--LLPIQKGRI 62
Query: 61 IFNGEDITSSSPDERARKGILLAFQVPPEIEGVR------ILDFLIQVLTEIKGM----- 109
+G+D + + +L V + + + + + +I LT+ K +
Sbjct: 63 YVDGKDYNGN-------QSLLKISYVSQKAQAFKAGFPASVKEVVISGLTKRKKLFQWFN 115
Query: 110 -KPEEAYDVVLNKAKELWFDDKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDS 168
EE+ VL++ DK++ SGG+++R+ + +AL+ EP +L+LDEP S
Sbjct: 116 RNDEESVKTVLSRLNIEHLIDKNIAEL-----SGGQQQRVLIARALISEPSVLILDEPTS 170
Query: 169 GVDVDSLSVISRKIEELHNRGVSIILITH 197
G+D +S +E L GV+IIL+TH
Sbjct: 171 GIDAKHVSEFYETLETLKQEGVTIILVTH 199
>pir||F82683 ABC transporter ATP-binding protein XF1409 [imported] - Xylella
fastidiosa (strain 9a5c)
>gi|9106421|gb|AAF84218.1|AE003972_3 (AE003972) ABC
transporter ATP-binding protein [Xylella fastidiosa]
Length = 240
Score = 95.2 bits (233), Expect = 7e-19
Identities = 63/201 (31%), Positives = 101/201 (49%), Gaps = 11/201 (5%)
Query: 1 MLKIEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKI 60
ML L + RE++R L + GE ++GPNG+GK+T I G G+I
Sbjct: 1 MLVASGLRKRYKHREVVREFGLTLQPGEIVGLLGPNGAGKTTCFYMIVG--LVNTDAGRI 58
Query: 61 IFNGEDITSSSPDERARKGILLAFQVPPEIEGVRILDFLIQVLTEIKGMKPEEA----YD 116
+G DIT++ RA+ G+ Q P + + D + VL + +K +A D
Sbjct: 59 ELDGRDITAAPMHARAQLGVGYLPQEPSVFRKLSVTDNIRLVLELRQDLKTNQARQHELD 118
Query: 117 VVLNKAKELWFDDKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLS 176
+LN+ + + + SGGER+R E+ +AL +P+++LLDEP +GVD S+
Sbjct: 119 SLLNELQI-----SHVAGQLGASLSGGERRRCEIARALAAQPRMMLLDEPFAGVDPISVG 173
Query: 177 VISRKIEELHNRGVSIILITH 197
I R I L RG+ +++ H
Sbjct: 174 EIQRIITHLKERGIGVLITDH 194
>pir||C75077 iron (iii) abc transporter, ATP-binding protein (hemv-1) PAB0678 -
Pyrococcus abyssi (strain Orsay)
>gi|5458432|emb|CAB49920.1| (AJ248286) iron (III) ABC
transporter, ATP-binding protein (hemV-1) [Pyrococcus
abyssi]
Length = 257
Score = 94.8 bits (232), Expect = 9e-19
Identities = 66/203 (32%), Positives = 109/203 (53%), Gaps = 18/203 (8%)
Query: 1 MLKIEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKI 60
++++ +L G+ +LRG+N V +GEF VI+GPNG+GK+TL IAG K KG +
Sbjct: 7 VIEVSNLEFSYNGKNVLRGVNFDVGEGEFLVILGPNGAGKTTLLRCIAGILK---CKGDV 63
Query: 61 IFNGEDITSSSPDERARKGILLAFQVPPEIEG--VRILDFLIQVLTEIKGMKPE----EA 114
G+ I + E A+ LLA+ VP +E +R+ DF++ G+ P EA
Sbjct: 64 KVFGKSIRDMNRLELAK---LLAY-VPQRVEPGFLRVFDFVLLGRRPYMGLSPRREDLEA 119
Query: 115 YDVVLNKAKELWFDDKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDS 174
L + F+D+ M+ SGGE +++ + +A+ E ++LLDEP + +D S
Sbjct: 120 VRRALKLLRVEEFEDRVMKT-----LSGGELQKVAIARAIAQETPVILLDEPTNNLDPKS 174
Query: 175 LSVISRKIEELHNRGVSIILITH 197
+ R I++L G ++I + H
Sbjct: 175 QIDVMRIIKDLIGEGKTVITVMH 197
>pir||C75310 ABC transporter, ATP-binding protein - Deinococcus radiodurans
(strain R1) >gi|6459931|gb|AAF11682.1|AE002048_2
(AE002048) ABC transporter, ATP-binding protein
[Deinococcus radiodurans]
Length = 258
Score = 94.8 bits (232), Expect = 9e-19
Identities = 71/217 (32%), Positives = 107/217 (48%), Gaps = 13/217 (5%)
Query: 14 REILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKIIFNGEDITSSSPD 73
R+++RG++ V+ GE + GPNG+GK+T + G + G+I D+T
Sbjct: 33 RQVVRGVDFRVSPGEIVALFGPNGAGKTTTFYMVVGF--IRPGGGRIALGSRDLTRLPMH 90
Query: 74 ERARKGILLAFQVPPEIEGVRILDFLIQVLTEIKGMKPEEAY--DVVLNKAKELWFDDKD 131
ERAR G+ Q P + D L+ +L K + E+ D +L + F
Sbjct: 91 ERARLGLGYLPQEPSAFRKLTARDNLLAILEYQKLTRAEQEARADALLAE-----FGLTH 145
Query: 132 MRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSVISRKIEELHN-RGV 190
+ SGGER+RLEL +AL +P LLLDEP +GVD S+ I R I EL + RG+
Sbjct: 146 LANSYAYQLSGGERRRLELARALTTDPDYLLLDEPFTGVDPKSIREIQRLIRELRDRRGI 205
Query: 191 SIILITHYGRIFGHIDKEKLKVHVMKDGKIVKSGGSE 227
+ + H R + +V++M DG+I G E
Sbjct: 206 GVFITDHNVRETIALTD---RVYLMYDGQIRFDGTPE 239
>gb|AAK42946.1| ABC transporter, ATP binding protein (branched chain amino acid)
[Sulfolobus solfataricus]
Length = 248
Score = 94.4 bits (231), Expect = 1e-18
Identities = 72/242 (29%), Positives = 118/242 (48%), Gaps = 31/242 (12%)
Query: 1 MLKIEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKI 60
+LK++ + G + L + L + + +F +++GPNGSGKSTL + G YK G I
Sbjct: 3 LLKLDSVSKYFGGIKALDSVTLEIENSKFTLLIGPNGSGKSTLINVVTG--IYKPDSGSI 60
Query: 61 IFNGEDITSSSPDERARKGILLAFQVPPEIEGVRILDFLIQVLTEIKG-------MKP-- 111
+IT P E + GI+ FQ P + +LD +I ++ IKG KP
Sbjct: 61 FLEDRNITGKKPHELYKLGIVRTFQNPQIFPNLSVLDNVILGISPIKGESILRSLFKPIW 120
Query: 112 --------EEAYDVV-LNKAKELWFDDKDMRRFVNVGFSGGERKRLELLQALLLEPKLLL 162
E+AY+++ + K LW D+ R SGG+ K LE+ ++L+ P+LL+
Sbjct: 121 LREEEELAEKAYNILKIVKLDRLW--DRPARE-----LSGGQLKLLEIARSLMTRPRLLV 173
Query: 163 LDEPDSGVDVDSLSVISRKIEELHNRGVSIILITHYGRIFGHIDKEKLKVHVMKDGKIVK 222
+DEP +GV+ I + +L R + I ++ H I + V+ M GK++
Sbjct: 174 MDEPLAGVNPQLAKEILNILTDL-KRDIGIFVVEHRLDIVANYAD---YVYAMFMGKVIA 229
Query: 223 SG 224
G
Sbjct: 230 KG 231
>pir||A75208 sugar transport ATP-binding protein. PAB2232 - Pyrococcus abyssi
(strain Orsay) >gi|5457621|emb|CAB49112.1| (AJ248283)
SUGAR TRANSPORT ATP-BINDING PROTEIN. [Pyrococcus abyssi]
Length = 362
Score = 94.4 bits (231), Expect = 1e-18
Identities = 64/210 (30%), Positives = 114/210 (53%), Gaps = 14/210 (6%)
Query: 17 LRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKIIFNGEDITSSSPDERA 76
L INL + DGEF ++GP+GSGKSTL T+AG YK T G+I F+ D+T P +R
Sbjct: 19 LDNINLEIKDGEFMALLGPSGSGKSTLLYTVAG--IYKPTSGRIYFDERDVTELPPKDRN 76
Query: 77 RKGILLAFQVPPEIEGVRILDFLIQVLTEIKGMKPEEAYDVVLNKAKELWFDDKDMRRFV 136
+ + + P + + + F +++ P++ D + K ++ +K + R+
Sbjct: 77 IGLVFQNWALYPHMTVYKNIAFPLEL-----RKAPKDEIDEKVRKVAKMLHIEKLLDRY- 130
Query: 137 NVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSVISRKIEELHNR-GVSIILI 195
SGG+++R+ + +AL+ EP++LLLDEP S +D + +++ L G++ I +
Sbjct: 131 PWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRLQKELGITTIYV 190
Query: 196 TH-YGRIFGHIDKEKLKVHVMKDGKIVKSG 224
TH D ++ V+++GKI++ G
Sbjct: 191 THDQAEALAMAD----RIAVIREGKILQVG 216
>pir||E83087 probable ATP-binding component of ABC transporter PA4461 [imported]
- Pseudomonas aeruginosa (strain PAO1)
>gi|9950697|gb|AAG07849.1|AE004860_5 (AE004860) probable
ATP-binding component of ABC transporter [Pseudomonas
aeruginosa]
Length = 241
Score = 94.4 bits (231), Expect = 1e-18
Identities = 64/231 (27%), Positives = 122/231 (52%), Gaps = 13/231 (5%)
Query: 2 LKIEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKII 61
LK + L +GR+++R ++++++ G+ ++GPNG+GK+T I G + +G +
Sbjct: 4 LKAQHLAKSYKGRQVVRDVSMSIDSGQIVGLLGPNGAGKTTCFYMIVG--LVQADQGVVR 61
Query: 62 FNGEDITSSSPDERARKGILLAFQVPPEIEGVRILDFLIQVL---TEIKGMKPEEAYDVV 118
+ +++T RAR GI Q + + D ++ +L +++ +EA + +
Sbjct: 62 IDEQNVTHLPMHGRARAGIGYLPQEASIFRKLSVSDNIMAILETRSDLDRNGRKEALEGL 121
Query: 119 LNKAKELWFDDKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSVI 178
L + F +R + + SGGER+R+E+ +AL PK +LLDEP +GVD S+ I
Sbjct: 122 LQE-----FHIHHIRDNLGMSLSGGERRRVEIARALASAPKFILLDEPFAGVDPISVGDI 176
Query: 179 SRKIEELHNRGVSIILITHYGRIFGHIDKEKLKVHVMKDGKIVKSGGSEII 229
+ I L +G+ I++ H R I + +++ DG+++ G +E I
Sbjct: 177 KQIIHHLKAKGIGILITDHNVRETLDICE---TAYIVNDGQLIAEGDAESI 224
>pir||A64409 ferric enterobactin transport ATP-binding protein homolog -
Methanococcus jannaschii
Length = 290
Score = 94.0 bits (230), Expect = 2e-18
Identities = 75/250 (30%), Positives = 134/250 (53%), Gaps = 16/250 (6%)
Query: 1 MLKIEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKI 60
MLK E+L V ++ GINL +N GE I+GPNG+GKSTL TIA + K K KG +
Sbjct: 1 MLKTENLSVGYGNYVVVEGINLEINRGEILCIIGPNGAGKSTLLKTIATYLKPK--KGVV 58
Query: 61 IFNGEDITSSSPDERARK-GILLAFQV-PPEIEGVRILDFLIQVLTEIKGMKPEEAYDVV 118
NG+ I P + A++ ++L +V P + G ++ T++ G E ++
Sbjct: 59 YLNGKKIHDLKPKDLAKEMAVVLTERVNPGNMTGFDVVAIGRHPYTDLFGRLTERDKKII 118
Query: 119 LNKAKELWFDDKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVD---SL 175
+ A+ + + + F + S GER+++ + +AL EPK+L+LDEP S +D L
Sbjct: 119 IESARAVNAEYLLEKNFFEM--SDGERQKIMIARALAQEPKVLILDEPTSFLDAKHKIEL 176
Query: 176 SVISRKIEELHNRGVSIILITHYGRIFGHIDKEKLKVHVMKDGKIVKSGGSEIIDMIERE 235
+++ RK+ + N ++I++ H + I K+ ++K+ K++ G E ++++RE
Sbjct: 177 TLLLRKLADXKN--LAIVVTLHDIELALRIAD---KMALIKNHKVIAYGYPE--NVMKRE 229
Query: 236 GFKAIFGGEN 245
++ +N
Sbjct: 230 IVNELYDLKN 239
>pir||E71067 probable ferrichrome transport ATP-binding protein - Pyrococcus
horikoshii >gi|3257652|dbj|BAA30335.1| (AP000005) 250aa
long hypothetical ferrichrome transport ATP-binding
protein [Pyrococcus horikoshii]
Length = 250
Score = 94.0 bits (230), Expect = 2e-18
Identities = 68/202 (33%), Positives = 107/202 (52%), Gaps = 18/202 (8%)
Query: 2 LKIEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKII 61
+++E+L GREIL IN ++ G F +I+GPNG+GK+TL IAG KY KG I
Sbjct: 4 IEVENLKFSHNGREILHDINFEIDKGSFLIILGPNGAGKTTLLRCIAGILKY---KGSIK 60
Query: 62 FNGEDITSSSPDERARKGILLAFQVPPEIEG--VRILDFLIQVLTEIKGMKPE----EAY 115
G DI S E A+ LLA+ VP IE +R+ DF++ G+ P +A
Sbjct: 61 VLGNDIKELSRIELAK---LLAY-VPQRIEPGFLRVFDFVLLGRKPYMGLNPGRKDLKAV 116
Query: 116 DVVLNKAKELWFDDKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSL 175
+ L +D+ M+ SGGE +++ + +A+ E ++LLDEP + +D S
Sbjct: 117 EDALRLLGIQRLEDRIMKT-----LSGGELQKVAIARAIAQETPVILLDEPTNNLDPKSQ 171
Query: 176 SVISRKIEELHNRGVSIILITH 197
+ I++L RG +++ + H
Sbjct: 172 IEVMEIIKDLVKRGKTVVTVMH 193
>pir||F72604 probable high-affinity branched-chain amino acid transport
ATP-binding protein APE1301 - Aeropyrum pernix (strain
K1) >gi|5104978|dbj|BAA80292.1| (AP000061) 248aa long
hypothetical high-affinity branched-chain amino acid
transport ATP-binding protein [Aeropyrum pernix]
Length = 248
Score = 94.0 bits (230), Expect = 2e-18
Identities = 72/219 (32%), Positives = 113/219 (50%), Gaps = 19/219 (8%)
Query: 16 ILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKY---KVTKGKIIFNGEDITSSSP 72
+++ ++L+V G ++GPNG+GK+TL ++G KY +VT+G I GEDIT+ P
Sbjct: 8 VIKNLSLSVEKGSITCLIGPNGAGKTTLLKAVSGVIKYERGRVTRGSIQLEGEDITNREP 67
Query: 73 DERARKGILLAFQVPPEIEGVRILDFLIQVLTEIKGMKPEEAYDVVLNKAKEL--WFDDK 130
DE AR+G++ +EG RI ++ TE + A + + + +F
Sbjct: 68 DEIARRGVIYV------MEGRRIFK---ELTTEENLVSVAYAAGASRDDIRSVLSYFPRL 118
Query: 131 DMRRFVNVG-FSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSVISRKIEELH-NR 188
R G SGGE++ L + ALL PKLL+LDEP G+ S I I+ LH
Sbjct: 119 KERLGEKAGNLSGGEQQMLAIAMALLYRPKLLMLDEPSLGLAPKITSQIYATIKMLHREE 178
Query: 189 GVSIILITHYGRIFGHIDKEKLKVHVMKDGKIVKSGGSE 227
G++I+L R I +V+++G+IV G +E
Sbjct: 179 GLTILLAEQNARKALEISDYG---YVIENGRIVLEGSAE 214
>gb|AAF33771.1|AF219259_4 (AF219259) YhbG [Haemophilus ducreyi]
Length = 241
Score = 94.0 bits (230), Expect = 2e-18
Identities = 67/230 (29%), Positives = 122/230 (52%), Gaps = 11/230 (4%)
Query: 2 LKIEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKII 61
L E L + R++++ ++L V GE ++GPNG+GK+T + G ++ +GKI
Sbjct: 4 LYAEHLAKSYKNRQVVKDVSLNVKAGEIIGLLGPNGAGKTTTFYMVVGLVRHD--QGKIR 61
Query: 62 FNGEDITSSSPDERARKGILLAFQVPPEIEGVRILDFLIQVLTEIKGMKPEEAYDVVLNK 121
+ +DI+ +RA+ GI Q + + D L+ VL K + ++ D +
Sbjct: 62 IDDQDISVLPMHDRAKYGIGYLPQEASIFHRLSVYDNLMAVLQVRKDLNNQQRKD----R 117
Query: 122 AKELW--FDDKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSVIS 179
A+EL F + +R + SGGER+R+E+ +AL P+ +LLDEP +GVD S+ I
Sbjct: 118 AEELISEFHIEHIRDNLGQALSGGERRRVEIARALAANPQFILLDEPFAGVDPISVIDIK 177
Query: 180 RKIEELHNRGVSIILITHYGRIFGHIDKEKLKVHVMKDGKIVKSGGSEII 229
+ I L RG+ +++ H R ++ + + +++ G+++ +G E I
Sbjct: 178 KIIVHLKQRGLGVLITDHNVRETLNVCQ---RAYIVGSGQMIANGTPEQI 224
>pir||A70158 ABC transporter, ATP-binding protein homolog - Lyme disease
spirochete >gi|2688376|gb|AAC66828.1| (AE001151) ABC
transporter, ATP-binding protein [Borrelia burgdorferi]
Length = 277
Score = 93.6 bits (229), Expect = 2e-18
Identities = 70/245 (28%), Positives = 125/245 (50%), Gaps = 11/245 (4%)
Query: 1 MLKIEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKI 60
+LK +++ + + + GI + + GE ++GPNG+GK+T TI G K GK+
Sbjct: 39 VLKADNIIKKYGEKLAVNGITINIYKGEVVGLLGPNGAGKTTTFYTIVGF--IKPNAGKV 96
Query: 61 IFNGEDITSSSPDERARKGILLAFQVPPEIEGVRILDFLIQVLTEIKGMKPEEAYDVVLN 120
+ N +I+S + ERAR GI+ Q + + + ++ L + + E ++N
Sbjct: 97 LINDYNISSLNMYERARIGIVYLPQDASIFRELTVEENIMVALERREDLSKAERKIELVN 156
Query: 121 KAKELWFDDKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSVISR 180
KE F+ K ++ SGGER+R E+ +AL + P LLLDEP +G+D ++ I
Sbjct: 157 LLKE--FEIKRIQSQKAYTLSGGERRRAEIARALAVNPYFLLLDEPFAGIDPIAIGDIKN 214
Query: 181 KIEELHNRGVSIILITHYGR-IFGHIDKEKLKVHVMKDGKIVKSGGSEIIDMIEREGFKA 239
I+ L + + +++ H R F ID + +++ G+++ G + I I E K
Sbjct: 215 IIKILKEKNIGVLITDHNVRDAFDIID----RAYIVYQGQVLDEGDVDYI--ISSEKAKK 268
Query: 240 IFGGE 244
++ GE
Sbjct: 269 LYLGE 273
>pir||G64435 cobalt transport ATP-binding protein O homolog - Methanococcus
jannaschii >gi|1591732|gb|AAB99089.1| (U67551) cobalt
transport ATP-binding protein (cbiO) [Methanococcus
jannaschii]
Length = 279
Score = 93.2 bits (228), Expect = 3e-18
Identities = 70/229 (30%), Positives = 118/229 (50%), Gaps = 15/229 (6%)
Query: 1 MLKIEDLHVEV-EGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGK 59
+++ +DL+ +G +L+GIN V GE ++GPNG+GKSTL L G + TKG+
Sbjct: 3 IVETKDLYFRYPDGTAVLKGINFKVKKGEMVSLLGPNGAGKSTLFLHFNGI--LRPTKGE 60
Query: 60 IIFNGEDITSSSPD-ERARKGILLAFQVPPEIEGVRILDFLIQVLTEIKGMKPEEAYDVV 118
++ G+ I RK + L FQ P + + + G+ EE V
Sbjct: 61 VLIKGKPIKYDKKSLVEVRKTVGLVFQNPDDQIFAPTVKEDVAFGPLNLGLPKEEVEKRV 120
Query: 119 LNKAKELW---FDDKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSL 175
K + F++K SGG++KR+ + L ++P++++LDEP +G+D
Sbjct: 121 KEALKAVGMEGFENKPPHHL-----SGGQKKRVAIAGILAMQPEVIVLDEPTAGLDPVGA 175
Query: 176 SVISRKIEELHNRGVSIILITHYGRIFGHIDKEKLKVHVMKDGKIVKSG 224
S I + + +L+ +G++II+ TH + + KV+VM DGKI+K G
Sbjct: 176 SKIMKLLYDLNKKGMTIIISTHDVDL---VPVYADKVYVMYDGKILKEG 221
>sp|Q58283|Y873_METJA HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PROTEIN MJ0873
>gi|2826343|gb|AAB98878.1| (U67531) ferric enterobactin
transport ATP-binding protein [Methanococcus jannaschii]
Length = 290
Score = 93.2 bits (228), Expect = 3e-18
Identities = 74/250 (29%), Positives = 134/250 (53%), Gaps = 16/250 (6%)
Query: 1 MLKIEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKI 60
MLK E+L V ++ GINL +N GE I+GPNG+GKSTL TIA + K K KG +
Sbjct: 1 MLKTENLSVGYGNYVVVEGINLEINRGEILCIIGPNGAGKSTLLKTIATYLKPK--KGVV 58
Query: 61 IFNGEDITSSSPDERARK-GILLAFQV-PPEIEGVRILDFLIQVLTEIKGMKPEEAYDVV 118
NG+ I P + A++ ++L +V P + G ++ T++ G E ++
Sbjct: 59 YLNGKKIHDLKPKDLAKEMAVVLTERVNPGNMTGFDVVAIGRHPYTDLFGRLTERDKKII 118
Query: 119 LNKAKELWFDDKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVD---SL 175
+ A+ + + + F + S GER+++ + +AL EPK+L+LDEP S +D L
Sbjct: 119 IESARAVNAEYLLEKNFFEM--SDGERQKIMIARALAQEPKVLILDEPTSFLDAKHKIEL 176
Query: 176 SVISRKIEELHNRGVSIILITHYGRIFGHIDKEKLKVHVMKDGKIVKSGGSEIIDMIERE 235
+++ RK+ + + ++I++ H + I K+ ++K+ K++ G E ++++RE
Sbjct: 177 TLLLRKLAD--EKNLAIVVTLHDIELALRIAD---KMALIKNHKVIAYGYPE--NVMKRE 229
Query: 236 GFKAIFGGEN 245
++ +N
Sbjct: 230 IVNELYDLKN 239
>sp|P07109|HISP_ECOLI HISTIDINE TRANSPORT ATP-BINDING PROTEIN HISP
>gi|7442522|pir||H65002 histidine transport protein hisP
- Escherichia coli >gi|1788644|gb|AAC75366.1| (AE000319)
ATP-binding component of histidine transport
[Escherichia coli K12] >gi|1799677|dbj|BAA16143.1|
(D90861) histidine transport protein hisP [Escherichia
coli] >gi|1799687|dbj|BAA16152.1| (D90862) histidine
transport protein hisP [Escherichia coli]
Length = 257
Score = 92.8 bits (227), Expect = 3e-18
Identities = 61/238 (25%), Positives = 120/238 (49%), Gaps = 18/238 (7%)
Query: 2 LKIEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKII 61
L + DLH E+L+G++L N G+ I+G +GSGKST I + K ++G I+
Sbjct: 6 LNVIDLHKRYGEHEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCI--NFLEKPSEGSIV 63
Query: 62 FNGEDIT------------SSSPDERARKGILLAFQVPPEIEGVRILDFLIQVLTEIKGM 109
NG+ I + R + + FQ + +L+ +++ ++ G+
Sbjct: 64 VNGQTINLVRDKDGQLKVADKNQLRLLRTRLTMVFQHFNLWSHMTVLENVMEAPIQVLGL 123
Query: 110 KPEEAYDVVLNKAKELWFDDKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSG 169
+EA + + ++ D++ ++ V SGG+++R+ + +AL +EP++LL DEP S
Sbjct: 124 SKQEARERAVKYLAKVGIDERAQGKYP-VHLSGGQQQRVSIARALAMEPEVLLFDEPTSA 182
Query: 170 VDVDSLSVISRKIEELHNRGVSIILITHYGRIFGHIDKEKLKVHVMKDGKIVKSGGSE 227
+D + + + R +++L G +++++TH H+ + +H GKI + G E
Sbjct: 183 LDPELVGEVLRIMQQLAEEGKTMVVVTHEMGFARHVSTHVIFLH---QGKIEEEGAPE 237
>pir||G72290 branched chain amino acid ABC transporter, ATP-binding protein -
Thermotoga maritima (strain MSB8)
>gi|4981686|gb|AAD36215.1|AE001771_8 (AE001771) branched
chain amino acid ABC transporter, ATP-binding protein
[Thermotoga maritima]
Length = 239
Score = 92.8 bits (227), Expect = 3e-18
Identities = 77/244 (31%), Positives = 121/244 (49%), Gaps = 35/244 (14%)
Query: 1 MLKIEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKI 60
+L+++ LHV ++GI+L V G+ ++G NG+GK+T IAG + KGKI
Sbjct: 5 VLEVQSLHVYYGAIHAIKGIDLKVPRGQIVTLIGANGAGKTTTLSAIAG--LVRAQKGKI 62
Query: 61 IFNGEDITSSSPDERARKGILLAFQVPPEIEGVRILDFLIQVLTEIKGM---KPEEAYDV 117
IFNG+DIT+ R GI L VP EG RI L + G K +E
Sbjct: 63 IFNGQDITNKPAHVINRMGIAL---VP---EGRRIFPELTVYENLMMGAYNRKDKEGIKR 116
Query: 118 VLNKAKELWFDDKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSV 177
L L+ K+ + + SGGE++ L + +AL+ PKLL++DEP G+ +S
Sbjct: 117 DLEWIFSLFPRLKERLKQLGGTLSGGEQQMLAIGRALMSRPKLLMMDEPSLGLAPILVSE 176
Query: 178 ISRKIEELHNRGVSIIL----------ITHYGRIFGHIDKEKLKVHVMKDGKIVKSG-GS 226
+ I++++ G +I+L + HYG +V++ G+IV G S
Sbjct: 177 VFEVIQKINQEGTTILLVEQNALGALKVAHYG-------------YVLETGQIVLEGKAS 223
Query: 227 EIID 230
E++D
Sbjct: 224 ELLD 227
>pir||A27835 histidine transport protein hisP - Escherichia coli
>gi|41705|emb|CAA68511.1| (Y00455) P protein (AA 1-257)
[Escherichia coli]
Length = 257
Score = 92.4 bits (226), Expect = 4e-18
Identities = 61/238 (25%), Positives = 120/238 (49%), Gaps = 18/238 (7%)
Query: 2 LKIEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKII 61
L + DLH E+L+G++L N G+ I+G +GSGKST I + K ++G I+
Sbjct: 6 LNVIDLHKRYGEHEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCI--NFLEKPSEGSIV 63
Query: 62 FNGEDIT------------SSSPDERARKGILLAFQVPPEIEGVRILDFLIQVLTEIKGM 109
NG+ I + R + + FQ + +L+ +++ ++ G+
Sbjct: 64 VNGQTINLVRDKDGQLKVADKNQLRLLRTRLTMVFQHFNLWSHMTVLENVMEAPIQVLGL 123
Query: 110 KPEEAYDVVLNKAKELWFDDKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSG 169
+EA + + ++ D++ ++ V SGG+++R+ + +AL +EP++LL DEP S
Sbjct: 124 SKQEARERAVKYLAKVGIDERAQGKYP-VHLSGGQQQRVSIARALAMEPEVLLFDEPTSA 182
Query: 170 VDVDSLSVISRKIEELHNRGVSIILITHYGRIFGHIDKEKLKVHVMKDGKIVKSGGSE 227
+D + + + R +++L G +++++TH H+ + +H GKI + G E
Sbjct: 183 LDPELVGELLRIMQQLAEEGKTMVVVTHEMGFARHVSTHVIFLH---QGKIEEEGAPE 237
>sp|P02915|HISP_SALTY HISTIDINE TRANSPORT ATP-BINDING PROTEIN HISP >gi|72452|pir||QREBPT
histidine transport protein hisP - Salmonella
typhimurium >gi|47734|emb|CAA24662.1| (V01373) reading
frame of hisP [Salmonella typhimurium]
>gi|154128|gb|AAA75581.1| (J01805) hisP gene product
[Salmonella typhimurium] >gi|223502|prf||0809313D
protein hidP [Salmonella typhimurium]
Length = 258
Score = 92.4 bits (226), Expect = 4e-18
Identities = 62/238 (26%), Positives = 119/238 (49%), Gaps = 18/238 (7%)
Query: 2 LKIEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKII 61
L + DLH G E+L+G++L G+ I+G +GSGKST I + K ++G II
Sbjct: 7 LHVIDLHKRYGGHEVLKGVSLQARAGDVISIIGSSGSGKSTFLRCI--NFLEKPSEGAII 64
Query: 62 FNGEDIT------------SSSPDERARKGILLAFQVPPEIEGVRILDFLIQVLTEIKGM 109
NG++I + R + + FQ + +L+ +++ ++ G+
Sbjct: 65 VNGQNINLVRDKDGQLKVADKNQLRLLRTRLTMVFQHFNLWSHMTVLENVMEAPIQVLGL 124
Query: 110 KPEEAYDVVLNKAKELWFDDKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSG 169
+A + L ++ D++ ++ V SGG+++R+ + +AL +EP +LL DEP S
Sbjct: 125 SKHDARERALKYLAKVGIDERAQGKYP-VHLSGGQQQRVSIARALAMEPDVLLFDEPTSA 183
Query: 170 VDVDSLSVISRKIEELHNRGVSIILITHYGRIFGHIDKEKLKVHVMKDGKIVKSGGSE 227
+D + + + R +++L G +++++TH H+ + +H GKI + G E
Sbjct: 184 LDPELVGEVLRIMQQLAEEGKTMVVVTHEMGFARHVSSHVIFLH---QGKIEEEGDPE 238
>pdb|1B0U|A Chain A, Atp-Binding Subunit Of The Histidine Permease From
Salmonella Typhimurium
Length = 262
Score = 92.4 bits (226), Expect = 4e-18
Identities = 62/238 (26%), Positives = 119/238 (49%), Gaps = 18/238 (7%)
Query: 2 LKIEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKII 61
L + DLH G E+L+G++L G+ I+G +GSGKST I + K ++G II
Sbjct: 7 LHVIDLHKRYGGHEVLKGVSLQARAGDVISIIGSSGSGKSTFLRCI--NFLEKPSEGAII 64
Query: 62 FNGEDIT------------SSSPDERARKGILLAFQVPPEIEGVRILDFLIQVLTEIKGM 109
NG++I + R + + FQ + +L+ +++ ++ G+
Sbjct: 65 VNGQNINLVRDKDGQLKVADKNQLRLLRTRLTMVFQHFNLWSHMTVLENVMEAPIQVLGL 124
Query: 110 KPEEAYDVVLNKAKELWFDDKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSG 169
+A + L ++ D++ ++ V SGG+++R+ + +AL +EP +LL DEP S
Sbjct: 125 SKHDARERALKYLAKVGIDERAQGKYP-VHLSGGQQQRVSIARALAMEPDVLLFDEPTSA 183
Query: 170 VDVDSLSVISRKIEELHNRGVSIILITHYGRIFGHIDKEKLKVHVMKDGKIVKSGGSE 227
+D + + + R +++L G +++++TH H+ + +H GKI + G E
Sbjct: 184 LDPELVGEVLRIMQQLAEEGKTMVVVTHEMGFARHVSSHVIFLH---QGKIEEEGDPE 238
>pir||F81875 sulfate ABC transporter, ATP-binding protein NMA1097 [similarity] -
Neisseria meningitidis (group A strain Z2491)
>gi|7379792|emb|CAB84360.1| (AL162755) putative sulphate
permease ATP-binding protein [Neisseria meningitidis
Z2491]
Length = 357
Score = 92.4 bits (226), Expect = 4e-18
Identities = 77/247 (31%), Positives = 120/247 (48%), Gaps = 14/247 (5%)
Query: 2 LKIEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKII 61
+ I++L+ L+ INL V G+ ++GP+G GK+TL IAG GKI+
Sbjct: 3 ITIQNLNKHFGNFHALKNINLNVPTGKLVSLLGPSGCGKTTLLRIIAGLEN--ADGGKIL 60
Query: 62 FNGEDITSSSPDERARKGILLAFQVPPEIEGVRILDFLIQVLTEI-KGMKPEEAYDVVLN 120
F+G+D+T+ ER + FQ + + D + LT + K +P + +
Sbjct: 61 FDGQDVTAKHVRERK---VGFVFQHYALFRHMNVFDNVAFGLTVLPKSERPSKGQ--IRA 115
Query: 121 KAKELW--FDDKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSVI 178
K +EL + + SGG+R+R+ L +AL +EPKLLLLDEP +D +
Sbjct: 116 KVEELLKLVQLSHLAKSYPHQLSGGQRQRIALARALAVEPKLLLLDEPFGALDAKVRKEL 175
Query: 179 SRKIEEL-HNRGVSIILITHYGRIFGHIDKEKLKVHVMKDGKIVKSGGSEIIDMIEREGF 237
+ ++ HN GV+ IL+TH + E + VM GKI ++G +E I F
Sbjct: 176 RTWLRDIHHNLGVTSILVTHDQEEALEVSDE---IVVMNHGKIEQTGSAEAIYRKPENAF 232
Query: 238 KAIFGGE 244
F GE
Sbjct: 233 VTEFLGE 239
>sp|O34392|YTRE_BACSU HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PROTEIN YTRE
>gi|7445667|pir||C70000 ABC transporter (ATP-binding
protein) homolog ytrE - Bacillus subtilis
>gi|2293173|gb|AAC00251.1| (AF008220) transporter
[Bacillus subtilis] >gi|2635526|emb|CAB15020.1| (Z99119)
similar to ABC transporter (ATP-binding protein)
[Bacillus subtilis]
Length = 231
Score = 92.1 bits (225), Expect = 6e-18
Identities = 68/224 (30%), Positives = 121/224 (53%), Gaps = 22/224 (9%)
Query: 12 EGRE----ILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKIIFNGEDI 67
+GRE +L+ ++L+V GE I+G +GSGKSTL I+G+ TKG+I+ NG D+
Sbjct: 16 KGRENEVPVLKDVSLSVAKGEIACIVGRSGSGKSTLLNLISGY--ISPTKGRIVINGTDV 73
Query: 68 TSSSPDERARKG------ILLAFQVPPEIEGVRILDFLIQVLTEIKGMKPEEAYDVVLNK 121
T + E A+ I +FQ+ P + ++ + +KG+KP E V +
Sbjct: 74 TGFNEKEWAQFRLDHFGFIFQSFQLIPGLTTYENVEMPLA----LKGIKPSERKQKVQDM 129
Query: 122 AKELWFDDKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSVISRK 181
K + ++ + N SGG+++R+ + +AL+L P ++L DEP +D ++ +
Sbjct: 130 LKRVGLENH-AAHYPNE-LSGGQQQRVSIARALILNPSIILADEPTGSLDSETEHEVLEL 187
Query: 182 IEELH-NRGVSIILITHYGRIFGHIDKEKLKVH--VMKDGKIVK 222
I++L+ RG++ ++ITH + I K ++H V+K G V+
Sbjct: 188 IQQLNRERGITFVIITHDDEV-ASIGHSKFQLHDGVLKGGITVE 230
>gb|AAD41366.1|AF151698_3 (AF151698) GlnP/GlnQ homolog [Agrobacterium tumefaciens]
Length = 502
Score = 92.1 bits (225), Expect = 6e-18
Identities = 64/217 (29%), Positives = 115/217 (52%), Gaps = 12/217 (5%)
Query: 15 EILRGINLAVNDGEFHVIMGPNGSGKSTL--ALTIAGHPKYKVTKGKIIFNGEDITSSSP 72
++L+G++L+V G I+GP+GSGKSTL L PK G I+ +GE I + P
Sbjct: 279 DVLKGVDLSVKPGSVTCIIGPSGSGKSTLLRGLNRLVEPK----SGDILIDGESILAMKP 334
Query: 73 DERARKGILLAFQVPPEIEGVRILDFLIQVLTEIKGMKPEEAYDVVLNKAKELWFDDKDM 132
E R+ + + FQ L+ ++ L +IKG+ EA + ++ +
Sbjct: 335 -ETLRRRVGMVFQHFNLFPDHTALENVMLSLKKIKGLPAAEAERIAKAGLADVGLASRQH 393
Query: 133 RRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSVISRKIEELHNRGVSI 192
R G SGG+++R+ + +AL +EP+++L DE S +D + + + + EL RG+++
Sbjct: 394 HR--PGGLSGGQQQRVAIARALAMEPEVILFDEVTSALDPELVKGVLNLMAELGTRGMTM 451
Query: 193 ILITHYGRIFGHIDKEKLKVHVMKDGKIVKSGGSEII 229
+++TH G + +V M +G++V++G E I
Sbjct: 452 VVVTHE---MGFARRVADQVVFMDEGRVVEAGTPEAI 485
>gb|AAB17558.1| (U72493) ATP binding protein [Chlamydia trachomatis]
Length = 257
Score = 91.7 bits (224), Expect = 8e-18
Identities = 71/229 (31%), Positives = 112/229 (48%), Gaps = 14/229 (6%)
Query: 1 MLKIEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKI 60
+L + +L + + + ++ VN GE ++GPNG+GK+T G + GKI
Sbjct: 3 VLSVCNLIKKYNKKPVTNDVSFQVNAGEIVGLLGPNGAGKTTAFYQTVG--LIRPDSGKI 60
Query: 61 IFNGEDITSSSPDERARKGILLAFQVPPEIEGVRILDFLIQVLTEIKGMKPEEAYDVVLN 120
+F DIT D RAR GI Q P + + + + LI VL I + E+ + +LN
Sbjct: 61 LFKNTDITKKPMDYRARLGIGYLAQEPTIFKELTVKENLICVLEIIYKTRKEQTH--LLN 118
Query: 121 KAKELWFDDKDMRRFVNV---GFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSV 177
DD + ++ SGGER+RLE+ L L P +LLLDEP + VD +
Sbjct: 119 AL----IDDLQLTTSLHKKAGSLSGGERRRLEIACVLALNPSVLLLDEPFANVDPLVIQN 174
Query: 178 ISRKIEELHNRGVSIILITHYGRIFGHIDKEKLKVHVMKDGKIVKSGGS 226
+ I+ L +RG+ I++ H + I + +++ DGKI G S
Sbjct: 175 VKYLIKILASRGIGILITDHNAKELLSIAD---RCYLIIDGKIFFEGSS 220
>pir||G71486 probable ABC transporter ATPase - Chlamydia trachomatis (serotype
D, strain UW3/Cx) >gi|3329103|gb|AAC68248.1| (AE001336)
ABC Transporter ATPase [Chlamydia trachomatis]
Length = 239
Score = 91.7 bits (224), Expect = 8e-18
Identities = 71/229 (31%), Positives = 112/229 (48%), Gaps = 14/229 (6%)
Query: 1 MLKIEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKI 60
+L + +L + + + ++ VN GE ++GPNG+GK+T G + GKI
Sbjct: 3 VLSVCNLIKKYNKKPVTNDVSFQVNAGEIVGLLGPNGAGKTTAFYQTVG--LIRPDSGKI 60
Query: 61 IFNGEDITSSSPDERARKGILLAFQVPPEIEGVRILDFLIQVLTEIKGMKPEEAYDVVLN 120
+F DIT D RAR GI Q P + + + + LI VL I + E+ + +LN
Sbjct: 61 LFKNTDITKKPMDYRARLGIGYLAQEPTIFKELTVKENLICVLEIIYKTRKEQTH--LLN 118
Query: 121 KAKELWFDDKDMRRFVNV---GFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSV 177
DD + ++ SGGER+RLE+ L L P +LLLDEP + VD +
Sbjct: 119 AL----IDDLQLTTSLHKKAGSLSGGERRRLEIACVLALNPSVLLLDEPFANVDPLVIQN 174
Query: 178 ISRKIEELHNRGVSIILITHYGRIFGHIDKEKLKVHVMKDGKIVKSGGS 226
+ I+ L +RG+ I++ H + I + +++ DGKI G S
Sbjct: 175 VKYLIKILASRGIGILITDHNAKELLSIAD---RCYLIIDGKIFFEGSS 220
>pir||C72044 ABC transporter ATPase - Chlamydophila pneumoniae (strain CWL029)
>gi|4377027|gb|AAD18862.1| (AE001653) ABC Transporter
ATPase [Chlamydophila pneumoniae CWL029]
>gi|8163348|gb|AAF73617.1| (AE002166) ABC transporter,
ATP-binding protein [Chlamydophila pneumoniae AR39]
>gi|8979095|dbj|BAA98930.1| (AP002547) ABC transporter
ATPase [Chlamydophila pneumoniae J138]
Length = 240
Score = 91.7 bits (224), Expect = 8e-18
Identities = 69/229 (30%), Positives = 113/229 (49%), Gaps = 14/229 (6%)
Query: 1 MLKIEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKI 60
+L + +L + + + ++ +N GE ++GPNG+GK+T G + GKI
Sbjct: 3 ILSVCNLVKKYNKKPVTNDVSFQINPGEIVGLLGPNGAGKTTAFYLTVG--LIRPDSGKI 60
Query: 61 IFNGEDITSSSPDERARKGILLAFQVPPEIEGVRILDFLIQVLTEIKGMKPEEAYDVVLN 120
IF D+T + D RAR GI Q P + + + D LI +L I + ++++ +LN
Sbjct: 61 IFKNVDVTKKTMDHRARLGIGYLAQEPTIFKELTVQDNLICILEIIYKARKQQSH--LLN 118
Query: 121 KAKELWFDDKDMRRFVNVG---FSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSV 177
DD + ++ SGGER+RLE+ L L P +LLLDEP + VD +
Sbjct: 119 TL----VDDLQLGSCLHKKAGTLSGGERRRLEIACVLALNPSVLLLDEPFANVDPLVIQN 174
Query: 178 ISRKIEELHNRGVSIILITHYGRIFGHIDKEKLKVHVMKDGKIVKSGGS 226
+ I+ L RG+ I++ H + I + +++ DGKI G S
Sbjct: 175 VKYLIKILAGRGIGILITDHNAKELLSIAD---RCYLIIDGKIFFEGSS 220
>pir||H72301 ABC transporter, ATP-binding protein - Thermotoga maritima (strain
MSB8) >gi|4981596|gb|AAD36131.1|AE001765_10 (AE001765)
ABC transporter, ATP-binding protein [Thermotoga
maritima]
Length = 236
Score = 91.7 bits (224), Expect = 8e-18
Identities = 73/245 (29%), Positives = 119/245 (47%), Gaps = 14/245 (5%)
Query: 1 MLKIEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKI 60
+L+ E+L R ++ G+NL + GE ++GPNG+GK+T+ I G T GKI
Sbjct: 3 VLRCENLKKRFGRRYVVNGVNLEFHRGEIVGLLGPNGAGKTTIFNMILG--VVVPTSGKI 60
Query: 61 IFNGEDITSSSPDERARKGILLAFQVPPEIEGVRILDFLIQVLT--EIKGMKPEEAYDVV 118
IF DIT RAR GI Q G+ + + + VL E K E + +
Sbjct: 61 IFRDVDITKFPVYRRARLGITYLQQETSIFGGLTVRENIDLVLRFHEKDKEKRERKIEEL 120
Query: 119 LNKAKELWFDDKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSVI 178
L++ F K + SGGE+++LEL + + L P +LLDEP SG+D ++ I
Sbjct: 121 LHE-----FHLKHLENQPASFLSGGEKRKLELARMMCLNPAFILLDEPFSGIDPKTVKEI 175
Query: 179 SRKIEELHNRGVSIILITHYGRIFGHIDKEKLKVHVMKDGKIVKSGGSEIIDMIEREGFK 238
+ EL + I++ H + + +++V+ G+I+ G E I +E E +
Sbjct: 176 QKMTLELKQKNFGIVITDHN---VDELVEIADRIYVIYKGEILAEGSPERI--LEDETVR 230
Query: 239 AIFGG 243
++ G
Sbjct: 231 EVYLG 235
>pir||A72279 sugar ABC transporter, ATP-binding protein - Thermotoga maritima
(strain MSB8) >gi|4981786|gb|AAD36307.1|AE001779_9
(AE001779) sugar ABC transporter, ATP-binding protein
[Thermotoga maritima]
Length = 355
Score = 91.7 bits (224), Expect = 8e-18
Identities = 63/182 (34%), Positives = 105/182 (57%), Gaps = 9/182 (4%)
Query: 17 LRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKIIFNGEDITSSSPDERA 76
L GI+L VN+GEF V++GP+G GK+TL IAG +VT GKI FN D+T+ P +R
Sbjct: 19 LDGIDLVVNEGEFLVLLGPSGCGKTTLLRCIAG--LEQVTGGKIFFNDRDVTNLPPKDRN 76
Query: 77 RKGILLAFQVPPEIEGVRILDFLIQVLTEIKGMKPEEAYDVVLNKAKELWFDDKDMRRFV 136
+ ++ V P +++ D + L K P+E + + A +L + + R+
Sbjct: 77 ISMVFQSYAVWPH---MKVYDNIAYPLKLKK--VPKEEIEKRVKWAADLLHISELLDRY- 130
Query: 137 NVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSVISRKIEELHNR-GVSIILI 195
SGG+R+R+ + +A++ EP++LL+DEP S +D + ++++L R GV+ I +
Sbjct: 131 PAQLSGGQRQRVAVARAIVHEPEVLLMDEPLSNLDALLRVKMRSELKKLQERIGVTTIYV 190
Query: 196 TH 197
TH
Sbjct: 191 TH 192
>sp|P45092|ARTP_HAEIN ARGININE TRANSPORT ATP-BINDING PROTEIN ARTP >gi|1073857|pir||D64188
arginine transport protein artP - Haemophilus influenzae
(strain Rd KW20) >gi|972900|gb|AAA95977.1| (U17295)
ArtP [Haemophilus influenzae] >gi|1574105|gb|AAC22831.1|
(U32797) arginine ABC transporter, ATP-binding protein
(artP) [Haemophilus influenzae Rd]
Length = 243
Score = 91.3 bits (223), Expect = 1e-17
Identities = 62/241 (25%), Positives = 130/241 (53%), Gaps = 9/241 (3%)
Query: 2 LKIEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKII 61
+++++L+ + L INL +G+ V++GP+G+GKSTL T+ K + I
Sbjct: 3 IRVKNLNFFYGSSQTLFDINLEAEEGDTVVLLGPSGAGKSTLIRTLNLLEVPKSGELSIA 62
Query: 62 FNGEDITSSSPDERA----RKGILLAFQVPPEIEGVRILDFLIQVLTEIKGMKPEEAYDV 117
N +++++ + +A R+ + + FQ + +++ LI+ +++G+ EA
Sbjct: 63 NNEFNLSNAMANPKAIQQLRQDVGMVFQQYHLWPHLTVIENLIEAPMKVRGVSENEAKTD 122
Query: 118 VLNKAKELWFDDKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSV 177
+ K L + R +++ SGG+++R+ + +AL+++P++LL DEP + +D + +
Sbjct: 123 AMELLKRLRLEQLADRFPLHL--SGGQQQRVAIARALMMKPQVLLFDEPTAALDPEITAQ 180
Query: 178 ISRKIEELHNRGVSIILITHYGRIFGHIDKEKLKVHVMKDGKIVKSGGSEIIDMIEREGF 237
+ I+EL G++ +++TH + K KV M+ GKIV+ G ++ + + E F
Sbjct: 181 VVDIIKELQETGITQVIVTHEVNV---AQKVATKVVYMEQGKIVEMGSADCFENPKTEQF 237
Query: 238 K 238
K
Sbjct: 238 K 238
>pir||D72485 probable high-affinity branched-chain amino acid transport
ATP-binding protein APE2524 - Aeropyrum pernix (strain
K1) >gi|5106229|dbj|BAA81540.1| (AP000064) 242aa long
hypothetical high-affinity branched-chain amino acid
transport ATP-binding protein [Aeropyrum pernix]
Length = 242
Score = 91.3 bits (223), Expect = 1e-17
Identities = 66/219 (30%), Positives = 113/219 (51%), Gaps = 17/219 (7%)
Query: 1 MLKIEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKI 60
+L + D++ G E L+G++ +V GE ++GPNG+GK+TL I+G Y +G++
Sbjct: 7 ILDVRDVYKRFGGIEALKGVSFSVRRGERVGLIGPNGAGKTTLFNIISGI--YMPDRGRV 64
Query: 61 IFNGEDITSSSPDERARKGILLAFQVPPEIEGVRILD-FLIQVLTEIKGMKPE-----EA 114
I+ G DIT R+R GI FQ+ + + +L+ ++ L ++ EA
Sbjct: 65 IYKGVDITGWPAYRRSRAGIARTFQIVRPLANLTVLNNVIVGALLRTNDIREARERAMEA 124
Query: 115 YDVVLNKAKELWFDDKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDS 174
D+V KE KD+ E+KRLEL +AL +P+LLLLDE +G+
Sbjct: 125 IDMVGLAGKEDILA-KDLNLI--------EKKRLELARALATQPELLLLDEIAAGLRPRE 175
Query: 175 LSVISRKIEELHNRGVSIILITHYGRIFGHIDKEKLKVH 213
+ + + E+ RG++II++ H R + + + +H
Sbjct: 176 VDDLVYTLLEISKRGITIIMVEHVMRAVMNFAERVIVLH 214
>gb|AAF73520.1| (AE002271) ABC transporter, ATP-binding protein [Chlamydia
muridarum]
Length = 239
Score = 91.3 bits (223), Expect = 1e-17
Identities = 71/229 (31%), Positives = 111/229 (48%), Gaps = 14/229 (6%)
Query: 1 MLKIEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKI 60
+L + +L + + ++ VN GE ++GPNG+GK+T G + GKI
Sbjct: 3 VLSVCNLIKRYNKKPVTNDVSFQVNAGEIVGLLGPNGAGKTTAFYQTVG--LIRPDSGKI 60
Query: 61 IFNGEDITSSSPDERARKGILLAFQVPPEIEGVRILDFLIQVLTEIKGMKPEEAYDVVLN 120
+F DIT D RAR GI Q P + + + + LI VL I + E+ + +LN
Sbjct: 61 LFKNTDITKKPMDYRARLGIGYLAQEPTIFKELTVKENLICVLEIIYKTRKEQTH--LLN 118
Query: 121 KAKELWFDDKDMRRFVNV---GFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSV 177
DD + ++ SGGER+RLE+ L L P +LLLDEP + VD +
Sbjct: 119 AL----IDDLQLTTSLHKKAGSLSGGERRRLEIACVLALNPSVLLLDEPFANVDPLVIQN 174
Query: 178 ISRKIEELHNRGVSIILITHYGRIFGHIDKEKLKVHVMKDGKIVKSGGS 226
+ I+ L +RG+ I++ H + I + +++ DGKI G S
Sbjct: 175 VKYLIKILASRGIGILITDHNAKELLSIAD---RCYLIIDGKIFFEGSS 220
>pir||G82707 ABC transporter ATP-binding protein XF1223 [imported] - Xylella
fastidiosa (strain 9a5c)
>gi|9106199|gb|AAF84033.1|AE003956_3 (AE003956) ABC
transporter ATP-binding protein [Xylella fastidiosa]
Length = 310
Score = 91.3 bits (223), Expect = 1e-17
Identities = 66/244 (27%), Positives = 123/244 (50%), Gaps = 24/244 (9%)
Query: 2 LKIEDLHVEVE-GREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKI 60
L + +LH G + L+GI+L + G+F ++GPNG+GKSTL ++ ++ G +
Sbjct: 11 LHVYNLHKTYSNGTQALKGISLDITPGDFFALLGPNGAGKSTLISIVSS--LVNLSSGSV 68
Query: 61 IFNGEDITSSSPDERARKGILLAFQVPPEIEGVRILDFLIQVLTEIKGM------KPEEA 114
G D+ R R + + P+ + + + +L G K E
Sbjct: 69 EVFGIDLV------RERSAAIRLIGLVPQEINFNLFEKPLDILINYAGFYGIPYAKAEAL 122
Query: 115 YDVVLNKAKELWFDDKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDS 174
++ L +A LW + M R + SGG ++RL + +A++ +P+LL+LDEP +GVDV+
Sbjct: 123 AEIELKRA-HLWEKAQVMSRTL----SGGMKRRLMIARAMMTQPRLLILDEPTAGVDVEI 177
Query: 175 LSVISRKIEELHNRGVSIILITHYGRIFGHIDKEKLKVHVMKDGKIVKSGGSE-IIDMIE 233
+ R ++E++ G +I+L THY + + ++ G+I++ G ++ ++
Sbjct: 178 RRDMWRVLQEINANGTTIMLTTHY---LEEAESLCRNLAIINGGQIIEKGPMRTLLAKLD 234
Query: 234 REGF 237
EGF
Sbjct: 235 VEGF 238
>emb|CAC05750.1| (AL391751) putative peptide transport system ATP-binding protein
[Streptomyces coelicolor]
Length = 327
Score = 91.3 bits (223), Expect = 1e-17
Identities = 71/237 (29%), Positives = 120/237 (49%), Gaps = 17/237 (7%)
Query: 1 MLKIEDLHVEVEGRE----ILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGH---PKY 53
+L++ DLHVE R+ + G++ V+ GE ++G +GSGKS A TI G P
Sbjct: 2 LLEVRDLHVEFHTRDGVAKAVNGVSYGVDAGETLAVLGESGSGKSVTAQTIMGILDIPPG 61
Query: 54 KVTKGKIIFNGEDITSSSPDERAR-KGILLAFQVPPEIEGVR----ILDFLIQVLTEIKG 108
+VT G+I+F G D+ +ER + +G +A + + + L ++ T +G
Sbjct: 62 RVTAGEILFEGRDLLKLKEEERRKVRGAEMAMIFQDALSSLNPVLTVGAQLAEMFTVHRG 121
Query: 109 MKPEEAYDVVLNKAKELWFDD-KDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPD 167
M ++A+ + + K+ R FSGG R+R+ + A+ LEPKL++ DEP
Sbjct: 122 MSRKDAHAKAVELMDRVRIPAAKERVRQYPHQFSGGMRQRIMIAMAMALEPKLIIADEPT 181
Query: 168 SGVDVDSLSVISRKIEELHNR-GVSIILITHYGRIFGHIDKEKLKVHVMKDGKIVKS 223
+ +DV + + + EL + +ILITH G + K+ VM G+IV++
Sbjct: 182 TALDVTVQAQVMDLLAELQRELHMGLILITH---DLGVVADVADKIAVMYAGRIVET 235
>emb|CAA67415.1| (X98917) orf4 [Methanopyrus kandleri]
Length = 228
Score = 90.9 bits (222), Expect = 1e-17
Identities = 65/198 (32%), Positives = 100/198 (49%), Gaps = 13/198 (6%)
Query: 1 MLKIEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKI 60
ML++E + RE+LRG++L V GE V+ GPNGSGKSTL +AG + +G++
Sbjct: 1 MLRVEGVKFSYGDREVLRGVDLEVEPGEVRVLFGPNGSGKSTLLKIVAG--ILRPDEGRV 58
Query: 61 IFNGEDITSSSPDERARKGILLAFQVPPEIEGVRILDFLIQVLTEIKGMKPEEAYDVVLN 120
I ED+T P+ER + Q P + + D + L +G P+ ++V
Sbjct: 59 IIGEEDVTDLPPEER---HVGYVPQQPALFPHMTVEDNITYSLQNGRG-DPDRLDELVEL 114
Query: 121 KAKELWFDDKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVD-SLSVIS 179
+ D K SGG + R+ L +AL +PK++LLDEP S VD+ ++
Sbjct: 115 LGLKEHLDRKPDE------LSGGYQSRVSLARALFSDPKVMLLDEPLSDVDLAVKAGLVP 168
Query: 180 RKIEELHNRGVSIILITH 197
R E L G+ + +TH
Sbjct: 169 RFREVLKETGIPALYVTH 186
>dbj|BAB06041.1| (AP001515) sugar ABC transporter (ATP-binding protein) [Bacillus
halodurans]
Length = 522
Score = 90.9 bits (222), Expect = 1e-17
Identities = 64/225 (28%), Positives = 115/225 (50%), Gaps = 11/225 (4%)
Query: 1 MLKIEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKI 60
+L++ D+ E G + L + L V G H +MG NG+GKSTL + G YK +GKI
Sbjct: 6 LLEMVDITKEFPGVKALDRVQLKVRKGSVHALMGENGAGKSTLMKILIG--MYKPNEGKI 63
Query: 61 IFNGEDITSSSPDERARKGILLAFQVPPEIEGVRILD--FLIQVLTEIKG--MKPEEAYD 116
IF+GE++T +S ++ KGI + Q I + + + FL + T K + ++ +
Sbjct: 64 IFDGEEVTFNSINDALDKGISMIHQELSPIPEMTVAENIFLGREPTFGKSGLVDNKKLIE 123
Query: 117 VVLNKAKELWFDDKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLS 176
+ N + L + ++ + + + +E+ +A+ KL+++DEP S + ++
Sbjct: 124 MTRNLLESLEINIDPRKKMGELSIANTQM--IEIAKAISFHSKLVIMDEPTSAITEKEVA 181
Query: 177 VISRKIEELHNRGVSIILITHYGRIFGHIDKEKLKVHVMKDGKIV 221
+ + IE L +GV II ITH +D+ + V +DGK +
Sbjct: 182 QLFKMIESLKKKGVGIIYITHK---MSELDEIADDISVFRDGKYI 223
>sp|P36879|YADG_ECOLI HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PROTEIN YADG
>gi|628771|pir||S45204 probable ABC-type transport
protein yagD - Escherichia coli
>gi|473794|dbj|BAA05583.1| (D26562) 'ORF' [Escherichia
coli] >gi|1786319|gb|AAC73238.1| (AE000122) putative
ATP-binding component of a transport system [Escherichia
coli K12]
Length = 308
Score = 90.5 bits (221), Expect = 2e-17
Identities = 58/191 (30%), Positives = 101/191 (52%), Gaps = 17/191 (8%)
Query: 13 GREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKIIFNGEDITSSSP 72
G + LRGI+L V G+F+ ++GPNG+GKST I+ T G++ G D+
Sbjct: 17 GVQALRGIDLQVEAGDFYALLGPNGAGKSTTIGIISS--LVNKTSGRVSVFGYDLEKDVV 74
Query: 73 DERARKGILLAFQVPPEIEGVRILDFLIQVLTEIKGMKPEEAYDVVLNKAK-----ELWF 127
+ + + G++ P+ + + Q++ G E + + K +LW
Sbjct: 75 NAKRQLGLV------PQEFNFNPFETVQQIVVNQAGYYGVERKEAYIRSEKYLKQLDLWG 128
Query: 128 DDKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSVISRKIEELHN 187
+ R + SGG ++RL + +AL+ EPKLL+LDEP +GVD++ + +++L++
Sbjct: 129 KRNERARML----SGGMKRRLMIARALMHEPKLLILDEPTAGVDIELRRSMWGFLKDLND 184
Query: 188 RGVSIILITHY 198
+G +IIL THY
Sbjct: 185 KGTTIILTTHY 195
>gb|AAB08067.1| (U67179) ORF2 [Xanthomonas campestris]
Length = 239
Score = 90.5 bits (221), Expect = 2e-17
Identities = 63/233 (27%), Positives = 115/233 (49%), Gaps = 15/233 (6%)
Query: 1 MLKIEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKI 60
ML L + + RE+++ L + GE ++GPNG+GK+T I G + G+I
Sbjct: 1 MLVATGLRKKYKQREVVKEFGLTLEAGEVVGLLGPNGAGKTTCFYMIVG--LVEADAGRI 58
Query: 61 IFNGEDITSSSPDERARKGILLAFQVPPEIEGVRILD---FLIQVLTEIKGMKPEEAYDV 117
+G D+T+ RA+ G+ Q P + + D ++++ E+ E+
Sbjct: 59 ELDGRDLTAEPMYARAKLGVGYLPQEPSIFRKLTVADNIRLVLELREELDNAGREKELVS 118
Query: 118 VLNKAKELWFDDKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSV 177
+L + + D+ + SGGER+R E+ +AL +P+++LLDEP +GVD S+
Sbjct: 119 LLEELQITHVADQ-----LGASLSGGERRRCEIARALAAKPRMMLLDEPFAGVDPISVGE 173
Query: 178 ISRKIEELHNRGVSIILITHYGR-IFGHIDKEKLKVHVMKDGKIVKSGGSEII 229
I R I L RG+ +++ H R G D + +++ +G ++ G + +
Sbjct: 174 IQRIIIHLKERGIGVLITDHNVRETLGICD----RAYILAEGGVLAQGAPDTL 222
>pir||B81147 sulfate ABC transporter, ATP-binding protein NMB0879 [imported] -
Neisseria meningitidis (group B strain MD58)
>gi|7226117|gb|AAF41290.1| (AE002440) sulfate ABC
transporter, ATP-binding protein [Neisseria meningitidis
MC58]
Length = 357
Score = 90.5 bits (221), Expect = 2e-17
Identities = 76/247 (30%), Positives = 119/247 (47%), Gaps = 14/247 (5%)
Query: 2 LKIEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKII 61
+ I++L+ L+ INL V G+ ++GP+G GK+TL IAG G I+
Sbjct: 3 ITIQNLNKHFGNFHALKNINLNVPTGKLVSLLGPSGCGKTTLLRIIAGLEN--ADGGNIL 60
Query: 62 FNGEDITSSSPDERARKGILLAFQVPPEIEGVRILDFLIQVLTEI-KGMKPEEAYDVVLN 120
F+G+D+T+ ER + FQ + + D + LT + K +P + +
Sbjct: 61 FDGQDVTAKHVRERK---VGFVFQHYALFRHMNVFDNVAFGLTVLPKSERPSKGQ--IRA 115
Query: 121 KAKELW--FDDKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSVI 178
K +EL + + SGG+R+R+ L +AL +EPKLLLLDEP +D +
Sbjct: 116 KVEELLKLVQLSHLAKSYPHQLSGGQRQRIALARALAVEPKLLLLDEPFGALDAKVRKEL 175
Query: 179 SRKIEEL-HNRGVSIILITHYGRIFGHIDKEKLKVHVMKDGKIVKSGGSEIIDMIEREGF 237
+ ++ HN GV+ IL+TH + E + VM GKI ++G +E I F
Sbjct: 176 RTWLRDIHHNLGVTSILVTHDQEEALEVSDE---IVVMNHGKIEQTGSAEAIYRKPENAF 232
Query: 238 KAIFGGE 244
F GE
Sbjct: 233 VTEFLGE 239
>sp|O34900|YTMN_BACSU PROBABLE AMINO-ACID ABC TRANSPORTER ATP-BINDING PROTEIN YTMN
>gi|7442519|pir||F69641 histidine transport protein hisP
- Bacillus subtilis >gi|2293251|gb|AAC00329.1|
(AF008220) putative amino acid transporter [Bacillus
subtilis] >gi|2635399|emb|CAB14894.1| (Z99118) histidine
transport protein (ATP-binding protein) [Bacillus
subtilis] >gi|2635418|emb|CAB14912.1| (Z99119) histidine
transport protein (ATP-binding protein) [Bacillus
subtilis]
Length = 259
Score = 90.1 bits (220), Expect = 2e-17
Identities = 63/233 (27%), Positives = 121/233 (51%), Gaps = 15/233 (6%)
Query: 1 MLKIEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTL--ALTIAGHPKYKVTKG 58
M++I+++H + +L+GINL V GE I+GP+GSGK+T L + P +G
Sbjct: 1 MIEIKNIHKQFGIHHVLKGINLTVRKGEVVTIIGPSGSGKTTFLRCLNLLERPD----EG 56
Query: 59 KIIFNGEDITSSSPDERA----RKGILLAFQVPPEIEGVRILDFLIQVLTEIKGMKPEEA 114
I + + I P ++ RK + FQ +++ +++ LT + M+ ++A
Sbjct: 57 IISIHDKVINCRFPSKKEVHWLRKQTAMVFQQYHLFAHKTVIENVMEGLTIARKMRKQDA 116
Query: 115 YDVVLNKAKELWFDDKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDS 174
Y V N+ +++ DK + + + SGG+++R+ + +AL + P +LL DEP + +D +
Sbjct: 117 YAVAENELRKVGLQDK-LNAYPSQ-LSGGQKQRVGIARALAIHPDVLLFDEPTAALDPEL 174
Query: 175 LSVISRKIEELHNRGVSIILITHYGRIFGHIDKEKLKVHVMKDGKIVKSGGSE 227
+ + + E+ G ++I++TH + + V M +G IV+ G E
Sbjct: 175 VGEVLEVMLEIVKTGATMIVVTHEMEFARRVSDQ---VVFMDEGVIVEQGTPE 224
>gi|11498563 branched-chain amino acid ABC transporter, ATP-binding protein
(braG-3) [Archaeoglobus fulgidus]
>gi|7445742|pir||F69369 branched-chain amino acid ABC
transporter, ATP-binding protein (braG-3) homolog -
Archaeoglobus fulgidus >gi|2649640|gb|AAB90285.1|
(AE001038) branched-chain amino acid ABC transporter,
ATP-binding protein (braG-3) [Archaeoglobus fulgidus]
Length = 221
Score = 90.1 bits (220), Expect = 2e-17
Identities = 72/241 (29%), Positives = 120/241 (48%), Gaps = 28/241 (11%)
Query: 1 MLKIEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKI 60
+LK E++ V++ GREIL+ + V E +++GPNGSGKSTL + G ++ +G++
Sbjct: 4 LLKAENISVKLNGREILKKVTCWVERREIMLVLGPNGSGKSTLLKAMMGVVEH---EGRV 60
Query: 61 IFNGEDITSSSPDERARKGILLAFQVPPEIEGVRILDFLIQVLTEIKGMKPEEAYDVV-- 118
+GED+T+ P ER R G+ LA PE L K + EE +
Sbjct: 61 FLDGEDVTALKPSERFRLGLTLA----PE------------RLRVAKKLTVEENLAIAGD 104
Query: 119 LNKAKELWFDDKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSVI 178
+ +A EL+ + + + SGGER+ + L +A + PK LLLDEP G+ V
Sbjct: 105 VERAFELFPELRPLANKRAGKLSGGERQMVVLARAFISNPKYLLLDEPFQGL---FREVR 161
Query: 179 SRKIEELH--NRGVSIILITHYGRIFGHIDKEKLKVHVMKDGKIVKSGGSEIIDMIEREG 236
R +E +H ++ ++++TH + K V+ GK + G + + + +E
Sbjct: 162 GRVVELIHEASKKSGVVVVTH--DEINEVFPMSEKTCVLVGGKAIYFGEGDGAEKLVKEM 219
Query: 237 F 237
F
Sbjct: 220 F 220
>pir||E75108 daunorubicin resistance ATP-binding protein (drra-1) PAB1923 -
Pyrococcus abyssi (strain Orsay)
>gi|5458093|emb|CAB49582.1| (AJ248285) daunorubicin
resistance ATP-binding protein (drrA-1) [Pyrococcus
abyssi]
Length = 328
Score = 89.7 bits (219), Expect = 3e-17
Identities = 70/232 (30%), Positives = 121/232 (51%), Gaps = 21/232 (9%)
Query: 2 LKIEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKII 61
+++E+L + ++GI+ V GE +GPNG+GK+T + K T GK I
Sbjct: 4 IEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLT--TLLKPTSGKAI 61
Query: 62 FNGEDITSSSPDERARKGILLAFQVPPEIEGVRILD--FLIQVLTEIKGMKPEEAYDVVL 119
G D+ + R + GI+ FQ P + + ++ ++ +KG + +E + +L
Sbjct: 62 VAGHDVVKEPQEVRKKIGIV--FQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELL 119
Query: 120 NKAKELW-FDDKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSVI 178
K ELW F D+ ++ F SGG ++RLE+ +AL+ EP++L LDEP G+D + + I
Sbjct: 120 -KFVELWRFKDRPVKYF-----SGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHI 173
Query: 179 ---SRKIEELHNRGVSIILITHYGRIFGHIDKEKLKVHVMKDGKIVKSGGSE 227
R ++E H ++I L THY ++ ++ ++ GKI+ G SE
Sbjct: 174 WEYIRTMKEEHE--MTIFLTTHY---MDEAEQLADRIAIIDHGKIIAEGTSE 220
>pir||H81784 probable ABC transporter ATP-binding protein NMA2131 [imported] -
Neisseria meningitidis (group A strain Z2491)
>gi|7380752|emb|CAB85343.1| (AL162758) putative ABC
transporter ATP-binding protein [Neisseria meningitidis
Z2491]
Length = 254
Score = 89.7 bits (219), Expect = 3e-17
Identities = 64/246 (26%), Positives = 126/246 (51%), Gaps = 14/246 (5%)
Query: 2 LKIEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKII 61
L +++L + R++++ +L + GE ++GPNG+GK+T I G G ++
Sbjct: 18 LVVQNLQKSFKKRQVVKSFSLEIESGEVVGLLGPNGAGKTTSFYMIVG--LIAADAGSVM 75
Query: 62 FNGEDITSSSPDERARKGILLAFQVPPEIEGVR--ILDFLIQVLTEIKGMKPEEAYDVVL 119
+G+++ ERAR G+ +P E R ++ I+ + EI+ + +
Sbjct: 76 LDGQELRHLPIHERARLGV---GYLPQEASIFRKMTVEQNIRAILEIRTKDKNQIDREIE 132
Query: 120 NKAKELWFDDKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSVIS 179
+L + +RR SGGER+R+E+ + L ++P +LLDEP +GVD ++ I
Sbjct: 133 KLLADL--NIGHLRRSPTPSLSGGERRRVEIARVLAMKPHFILLDEPFAGVDPIAVIDIQ 190
Query: 180 RKIEELHNRGVSIILITHYGRIFGHIDKEKLKVHVMKDGKIVKSGGSEIIDMIEREGFKA 239
+ I L +RG+ +++ H R I + +++ DG ++ SG + D++ E ++
Sbjct: 191 KIIGFLKSRGIGVLITDHNVRETLSICD---RAYIISDGAVLASGKPD--DLVGNEQVRS 245
Query: 240 IFGGEN 245
++ G+N
Sbjct: 246 VYLGKN 251
>pir||F82303 ABC transporter, ATP-binding protein VC0589 [imported] - Vibrio
cholerae (group O1 strain N16961)
>gi|9655020|gb|AAF93756.1| (AE004144) ABC transporter,
ATP-binding protein [Vibrio cholerae]
Length = 305
Score = 89.7 bits (219), Expect = 3e-17
Identities = 79/257 (30%), Positives = 129/257 (49%), Gaps = 42/257 (16%)
Query: 2 LKIEDLHVEVEGR-EILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKI 60
L+IE L G E L+GI+L V G+F+ ++GPNG+GKST I+ T GK+
Sbjct: 4 LEIEQLRKTYAGGFEALKGISLQVKKGDFYALLGPNGAGKSTTIGIISS--LVNKTSGKV 61
Query: 61 IFNGEDITSSSPDERARKGILLAFQVPPEIEGVRILDFLIQVLTEIKGMKPEEAYDVVLN 120
G D+ S + + G++ P+ + + Q++ + G Y V
Sbjct: 62 TVFGYDLDSQLELAKQKLGLV------PQEFNFNPFETVEQIVLQQAGY-----YGVPKA 110
Query: 121 KAKE----------LWFDDKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGV 170
AKE LW +K R N+ SGG ++RL + +AL+ EP+LL+LDEP +GV
Sbjct: 111 LAKERAKKYLTQLDLW--EKRSERARNL--SGGMKRRLMIARALMHEPQLLILDEPTAGV 166
Query: 171 DVDSLSVISRKIEELHNRGVSIILITHYGRIFGHIDKEKLKVHVMKDGKIVKSGGSEIID 230
D++ + +++++ +GV+IIL THY + E L H+ I++ G +
Sbjct: 167 DIELRRSMWEFLKQINAQGVTIILTTHYLE-----EAEMLCRHI----GIIQRG-----E 212
Query: 231 MIEREGFKAIFGGENVE 247
+IE K++ G +VE
Sbjct: 213 LIENTTMKSLLGKLHVE 229
>pir||G83031 probable ATP-binding component of ABC transporter PA4909 [imported]
- Pseudomonas aeruginosa (strain PAO1)
>gi|9951186|gb|AAG08294.1|AE004904_2 (AE004904) probable
ATP-binding component of ABC transporter [Pseudomonas
aeruginosa]
Length = 238
Score = 89.7 bits (219), Expect = 3e-17
Identities = 71/229 (31%), Positives = 115/229 (50%), Gaps = 13/229 (5%)
Query: 1 MLKIEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKI 60
+L+ ++ V + L+ ++L VN+GE ++G NG+GKSTL ++I G P+ G+I
Sbjct: 5 LLEFREVDVFYGPIQALKKVSLQVNEGETVSLIGANGAGKSTLLMSIFGQPR--AAAGQI 62
Query: 61 IFNGEDITSSSPDERARKGILLAFQVPPEIEGVRILDFLIQVLTEIKGMKP--EEAYDVV 118
++ G+DI S A GI Q P EG R+ + + G P + +
Sbjct: 63 LYRGQDIRQKSAHYVASNGIA---QSP---EGRRVFPDMSVEENLLMGTIPIGMDHAEED 116
Query: 119 LNKAKELWFDDKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSVI 178
+ + EL+ K+ R + SGGE++ L + +AL+ PKLLLLDEP G+ + I
Sbjct: 117 MQRMFELFPRLKERRNQRAMTMSGGEQQMLAIARALMSRPKLLLLDEPSLGLAPIVVKQI 176
Query: 179 SRKIEELHNRGVSIILITHYGRIFGHIDKEKLKVHVMKDGKIVKSGGSE 227
+ + EL G++I L+ H K + +VM G+I SG E
Sbjct: 177 FQTLRELARSGMTIFLVEQNA---NHALKLSDRAYVMVTGEIRMSGSGE 222
>dbj|BAB03966.1| (AP001507) ABC transporter (ATP-binding protein) [Bacillus
halodurans]
Length = 230
Score = 89.3 bits (218), Expect = 4e-17
Identities = 63/198 (31%), Positives = 109/198 (54%), Gaps = 11/198 (5%)
Query: 1 MLKIEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKI 60
ML++ +L V + ++R ++L+V G+ ++G NG GKST+ TI G +V +G I
Sbjct: 1 MLQLSNLEVAYDESTVIRDVSLSVQPGKVVCLLGRNGVGKSTIMKTIIG--LLQVKRGSI 58
Query: 61 IFNGEDITSSSPDERARKGILLAFQVPPEIEGVRILDFLIQVLTEIKGMKPEEAYDVVLN 120
GED+T SP RAR+GI VP +G I FL + G++ + + ++
Sbjct: 59 QLEGEDVTKKSPTYRARRGI---GYVP---QGRDIFPFLTVHENLLLGLEACDTKEQKID 112
Query: 121 KAKELWFDD-KDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSVIS 179
++ +F K+M+ SGG++++L L +AL+ PK LLLDEP GV + + I
Sbjct: 113 ESLYAYFPILKEMKNRRGGDLSGGQQQQLALARALVANPKFLLLDEPTEGVQPNIVYDIQ 172
Query: 180 RKIEEL--HNRGVSIILI 195
+ I ++ ++ +I+L+
Sbjct: 173 KVIMDVKKQSKDQAILLV 190
>dbj|BAB04773.1| (AP001510) transposase (08)/ABC transporter (ATP-binding protein)
[Bacillus halodurans]
Length = 901
Score = 89.3 bits (218), Expect = 4e-17
Identities = 65/227 (28%), Positives = 117/227 (50%), Gaps = 15/227 (6%)
Query: 1 MLKIEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKI 60
M+++ DL R++++GIN+ + GE ++GPNG+GKST I+ + T G +
Sbjct: 592 MIEVIDLSKTYRNRQVVKGINMFIEKGEMVGLLGPNGAGKSTTISMISS--LIQPTSGDV 649
Query: 61 IFNGEDITSSSPDERARKGILLAFQVPPEIEGVRILDFL--IQVLTEIKGMKPEEAYDVV 118
+ G I S R+ G+ VP EI L + +I G+K EE +
Sbjct: 650 LIKGGSIHKQSKAIRSILGV-----VPQEIAVYHDLTARENLAFFGKIYGLKGEELKHRM 704
Query: 119 LNKAKELWFDDKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSVI 178
+ + + +++ R FSGG ++RL + ALL EP+L+++DEP G+D S S I
Sbjct: 705 ESTLQLVGLEERQNDRVHT--FSGGMKRRLNIAVALLHEPELIIMDEPTVGIDPQSRSHI 762
Query: 179 SRKIEELH-NRGVSIILITHYGRIFGHIDKEKLKVHVMKDGKIVKSG 224
++ L+ R +++I +HY ++ ++++M G+++ SG
Sbjct: 763 LETVKTLNQEREMTVIYTSHY---MEEVEYLCDRLYIMDRGEVIASG 806
>pir||C71081 probable resistance ATP-binding protein - Pyrococcus horikoshii
>gi|3257326|dbj|BAA30009.1| (AP000004) 324aa long
hypothetical resistance ATP-binding protein [Pyrococcus
horikoshii]
Length = 324
Score = 88.9 bits (217), Expect = 5e-17
Identities = 69/228 (30%), Positives = 116/228 (50%), Gaps = 17/228 (7%)
Query: 4 IEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKIIFN 63
+E+L + E +RGI+ V GE +GPNG+GK+T + K T G+ I
Sbjct: 9 VENLVKKYGDFEAVRGISFKVRRGEIFAFLGPNGAGKTTTVHMLT--TLLKPTSGRAIVA 66
Query: 64 GEDITSSSPDERARKGILLAFQVPPEIEGVRILDFLIQVLTEIKGMKPEEAYDVV--LNK 121
G D+ S + R + G++ FQ P + + + + I G+K +E + L K
Sbjct: 67 GHDVVKESREVRKKIGVV--FQDPSVDRELTAWENMY-IHGRIYGLKGQELKKKIEELLK 123
Query: 122 AKELW-FDDKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSVISR 180
ELW F D+ ++ F SGG ++RLE+ +AL+ EP++L LDEP G+D + + I
Sbjct: 124 FVELWEFKDRQVKYF-----SGGMQRRLEIARALIHEPEVLFLDEPTIGLDPQTRAHIWE 178
Query: 181 KIEEL-HNRGVSIILITHYGRIFGHIDKEKLKVHVMKDGKIVKSGGSE 227
I+ + ++I L THY ++ ++ ++ GKI+ G +E
Sbjct: 179 YIKTMKEEHDMTIFLTTHY---MDEAEQLADRIAIIDHGKIIAEGTAE 223
>pir||A72452 probable peptide transport ATP-binding protein APE2261 - Aeropyrum
pernix (strain K1) >gi|5105962|dbj|BAA81273.1|
(AP000064) 320aa long hypothetical peptide transport
ATP-binding protein [Aeropyrum pernix]
Length = 320
Score = 88.9 bits (217), Expect = 5e-17
Identities = 71/225 (31%), Positives = 119/225 (52%), Gaps = 27/225 (12%)
Query: 19 GINLAVNDGEFHVIMGPNGSGKSTLALTIAG--HPKYKVTKGKIIFNGEDITSSSPDERA 76
G++L+VN GE+ I+G +GSGKSTLAL+I P ++ G+I+++G D+ S + +E
Sbjct: 29 GVSLSVNKGEWISIVGESGSGKSTLALSIPRLIMPPGRIVGGRILYSGVDLLSLAGEELR 88
Query: 77 R---KGILLAFQVPP------EIEGVRILDFLIQVLTEIKGMKPEEAYDVVLNKAKELWF 127
R + I + FQ P G +I + L++ G + E + A EL
Sbjct: 89 RYRGREIGMVFQDPTAYLDPYRTVGSQIAESLLEHGLASSGSEAES----MAGDALELVG 144
Query: 128 DDKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSVISRKIEEL-- 185
+D SGG+R+R+ + A+ LEPK+L+ DEP + +DV V+ KI +L
Sbjct: 145 IPRDRASVYPHQLSGGQRQRVAIAAAVALEPKILIADEPTTALDV----VVQAKIMDLMK 200
Query: 186 ---HNRGVSIILITHYGRIFGHIDKEKLKVHVMKDGKIVKSGGSE 227
RG++++L+TH G + ++ VM G++V+ G +E
Sbjct: 201 KLQEERGLTVMLVTH---DIGLAAEYSDRIAVMYAGELVEIGPAE 242
>pir||H75077 abc transporter, ATP-binding protein PAB1696 - Pyrococcus abyssi
(strain Orsay) >gi|5458437|emb|CAB49925.1| (AJ248286)
ABC transporter, ATP-binding protein [Pyrococcus abyssi]
Length = 253
Score = 88.9 bits (217), Expect = 5e-17
Identities = 63/235 (26%), Positives = 118/235 (49%), Gaps = 10/235 (4%)
Query: 1 MLKIEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKI 60
M+ +E+L G+E+L+GI+ V DGE + ++GPNGSGKST ++G +GK+
Sbjct: 1 MIIVENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSG--IITDFEGKV 58
Query: 61 IFNGEDITSSSPDERARKGILLAFQVPPEIEGVRILDFLIQVLTEIKGMKPEEAYDVVLN 120
I G ++ + G + + P E + +F + ++G+ P++ + +
Sbjct: 59 IVGGVEVAKDPLQVKRIVGYVP--ETPALYESLTPAEF-FSFVGGVRGI-PKDILEERVR 114
Query: 121 KAKELWFDDKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSVISR 180
K E + K M + + S G ++++ L+ +LL +PK+L+LDE +G+D S +
Sbjct: 115 KLVEAFEIKKYMNQLIGT-LSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRE 173
Query: 181 KIEELHNRGVSIILITHYGRIFGHIDKEKLKVHVMKDGKIVKSGGSEIIDMIERE 235
+ E G SI+ TH + + +V ++ G+I+ G E + I +E
Sbjct: 174 LLYEFKEEGKSIVFSTH---VLALAELICDRVGIIYQGRIIAEGTVEELKEISKE 225
>dbj|BAA83955.1| (AB024563) YFIL [Bacillus halodurans]
Length = 310
Score = 88.9 bits (217), Expect = 5e-17
Identities = 65/227 (28%), Positives = 117/227 (50%), Gaps = 15/227 (6%)
Query: 1 MLKIEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKI 60
M+++ DL R++++GIN+ + GE ++GPNG+GKST I+ + T G +
Sbjct: 1 MIEVIDLSKTYRNRQVVKGINMFIEKGEMVGLLGPNGAGKSTTISMISS--LIQPTSGDV 58
Query: 61 IFNGEDITSSSPDERARKGILLAFQVPPEIEGVRILDFL--IQVLTEIKGMKPEEAYDVV 118
+ G I S R+ G+ VP EI L + +I G+K EE +
Sbjct: 59 LIKGGSIHKRSKAIRSILGV-----VPQEIAVYHDLTARENLAFFGKIYGLKGEELKHRM 113
Query: 119 LNKAKELWFDDKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSVI 178
+ + + +++ R FSGG ++RL + ALL EP+L+++DEP G+D S S I
Sbjct: 114 ESTLQLVGLEERQNDRVHT--FSGGMKRRLNIAVALLHEPELIIMDEPTVGIDPQSRSHI 171
Query: 179 SRKIEELH-NRGVSIILITHYGRIFGHIDKEKLKVHVMKDGKIVKSG 224
++ L+ R +++I +HY ++ ++++M G+++ SG
Sbjct: 172 LETVKTLNQEREMTVIYTSHY---MEEVEYLCDRLYIMDRGEVIASG 215
>pir||C75612 phosphate ABC transporter, ATP-binding protein - Deinococcus
radiodurans (strain R1)
>gi|6460498|gb|AAF12204.1|AE001862_30 (AE001862)
phosphate ABC transporter, ATP-binding protein
[Deinococcus radiodurans]
Length = 254
Score = 88.9 bits (217), Expect = 5e-17
Identities = 62/205 (30%), Positives = 110/205 (53%), Gaps = 11/205 (5%)
Query: 1 MLKIEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGH----PKYKVT 56
+L +D+ + ++ ++ +NL V G + +GP+G GK+T I P +VT
Sbjct: 6 LLSAQDVSIYYGDKQAVKNVNLDVRPGTVNAFIGPSGCGKTTFLRAINRMHDLTPGARVT 65
Query: 57 KGKIIFNGEDITSSSPDERA-RKGILLAFQVPPEIEGVRILDFLIQVLTEIKGMKPEEAY 115
G I+ +G+DI S S D A R+ + + FQ P + + D ++ L ++ G+K +
Sbjct: 66 -GSILLDGQDIYSPSVDPVAMRRRVGMVFQKPNPFPTMSVFDNVVAGL-KLTGVKNRDHL 123
Query: 116 DVVLNKAKE---LWFDDKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDV 172
V ++ LW + KD G SGG+++RL + +AL +EP++LL+DEP S +D
Sbjct: 124 MQVAERSLRGAALWDEVKDRLNTPATGLSGGQQQRLCIARALAVEPEILLMDEPTSALDP 183
Query: 173 DSLSVISRKIEELHNRGVSIILITH 197
S + I + +L + +II++TH
Sbjct: 184 ASTAKIEDLLGDL-KKVTTIIIVTH 207
>pir||A70180 spermidine/putrescine ABC transporter, ATP-binding protein (potA)
homolog - Lyme disease spirochete
>gi|2688562|gb|AAB91525.1| (AE001165)
spermidine/putrescine ABC transporter, ATP-binding
protein (potA) [Borrelia burgdorferi]
Length = 347
Score = 88.5 bits (216), Expect = 7e-17
Identities = 71/256 (27%), Positives = 133/256 (51%), Gaps = 30/256 (11%)
Query: 1 MLKIEDL--HVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKG 58
+L+I++L + + G + L INL + EF ++GP+G GK+TL + G K G
Sbjct: 5 ILEIKNLSHYYDNNGNKTLDNINLKIKKNEFITLLGPSGCGKTTLIKILGGFLSQK--NG 62
Query: 59 KIIFNGEDITSSSPDERARKGILLAFQVPPEIEGVRILDFLIQVLTEIKGMKPEEAYDVV 118
+I F ++I+ +SP++R + + + P + + F +++ K D++
Sbjct: 63 EIYFFSKEISKTSPNKREINTVFQNYALFPHMNVFDNISFGLRMKKTPK--------DII 114
Query: 119 LNKAK---ELWFDDKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSL 175
K K L K R +N SGG+++R+ + +A+++EPKLLLLDEP S +D+
Sbjct: 115 KEKVKTSLSLIGMPKYAYRNINE-LSGGQKQRVAIARAMVMEPKLLLLDEPLSALDLKMR 173
Query: 176 SVISRKIEELHNR-GVSIILITHYGRIFGHIDKEKL-----KVHVMKDGKIVKSGGSEII 229
+ ++++++ + G++ I +TH D+E+ ++ VM +G I++ G E I
Sbjct: 174 QEMQKELKKIQRQLGITFIYVTH--------DQEEALTMSDRIVVMNEGIILQIGTPEEI 225
Query: 230 DMIEREGFKAIFGGEN 245
+ F A F GE+
Sbjct: 226 YNEPKTKFVADFIGES 241
>dbj|BAB03891.1| (AP001507) amino acid ABC transporter (ATP-binding protein)
[Bacillus halodurans]
Length = 247
Score = 88.5 bits (216), Expect = 7e-17
Identities = 69/231 (29%), Positives = 120/231 (51%), Gaps = 16/231 (6%)
Query: 1 MLKIEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTL--ALTIAGHP---KYKV 55
M+ ++ L+ + E+L+G++L V G+ V++GP+GSGK+TL L I P ++
Sbjct: 1 MIAVQSLYKKFGEVEVLKGLDLTVERGKVVVVIGPSGSGKTTLLRCLNILETPTSGSVQI 60
Query: 56 TKGKIIFNGEDITSSSPDERARKGILLAFQVPPEIEGVRILDFLIQVLTEIKGMKPEEAY 115
+ F+G+ SS R+ + FQ + +L +++ +K +EA
Sbjct: 61 ENQTLDFSGK--VSSKEIANFRRLTGMVFQSYNLFPHMTVLQNVMEGPMTVK----KEAK 114
Query: 116 DVVLNKAKELWFDD--KDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVD 173
V KAK+L D SGG+++R+ + +AL +EPK++L DEP S +D +
Sbjct: 115 AQVEEKAKQLLAKVGLADKETVYPFQLSGGQQQRVGIARALAMEPKVMLFDEPTSALDPE 174
Query: 174 SLSVISRKIEELHNRGVSIILITHYGRIFGHIDKEKLKVHVMKDGKIVKSG 224
+ + R ++EL G+++I++TH R + E V M DGKIV+ G
Sbjct: 175 LVGEVLRVMKELAEEGMTMIVVTHEMRFAQEVADE---VIFMDDGKIVERG 222
>gb|AAG32538.1| (AY005472) SalT [Streptococcus salivarius]
Length = 722
Score = 88.5 bits (216), Expect = 7e-17
Identities = 70/232 (30%), Positives = 116/232 (49%), Gaps = 27/232 (11%)
Query: 2 LKIEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKII 61
LK + E+ G ++L GINL V+ GEF I+G +GSGK+TLA + G+ + G I
Sbjct: 480 LKNINYQYELNGAKVLNGINLKVHSGEFVAIIGKSGSGKTTLAKMLLGY--VSPSSGDIT 537
Query: 62 FNGEDITSSSPDERARKGI-LLAFQVPPEIEGVRILDFLI--------QVLTEIKGMKPE 112
+N +I+ S D++ + I Q P +G + + + QV+ K +
Sbjct: 538 YN--NISYSKIDKKDFRNISAFVSQDSPMFDGDVMYNISLGRESVSGEQVIETCKRVSIY 595
Query: 113 EAYDVVLNKAKELWFDDKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDV 172
+ + K L F D N SGG+++R+ L + L+ P++L+LDEP S +DV
Sbjct: 596 DDIRSMPMKFHTLLFRD-------NPSISGGQKQRISLARELVTTPRILVLDEPTSALDV 648
Query: 173 DSLSVISRKIEELHNRGVSIILITHYGRIFGHIDKEKLKVHVMKDGKIVKSG 224
+ +I + +E LH + +L+TH D K+ +M +GKI+ G
Sbjct: 649 KTERIIQKNVEALH---CTRVLVTHRLNTVEKAD----KILIMDNGKIIDYG 693
>gi|11499468 daunorubicin resistance ATP-binding protein (drrA) [Archaeoglobus
fulgidus] >gi|7445660|pir||C69485 daunorubicin
resistance ATP-binding protein (drrA) homolog -
Archaeoglobus fulgidus >gi|2648659|gb|AAB89368.1|
(AE000972) daunorubicin resistance ATP-binding protein
(drrA) [Archaeoglobus fulgidus]
Length = 398
Score = 88.5 bits (216), Expect = 7e-17
Identities = 72/232 (31%), Positives = 120/232 (51%), Gaps = 21/232 (9%)
Query: 2 LKIEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKII 61
+++E+L + E +RG++ V GE +GPNG+GK+T + K T GK
Sbjct: 80 IEVENLVKKFGDFEAVRGVSFKVKRGEIFAFLGPNGAGKTTTVHILT--TLLKPTSGKAF 137
Query: 62 FNGEDITSSSPDERARKGILLAFQVPPEIEGVRILDFLIQVLTEIKGMKPEEAYDVV--L 119
G D+ + + R R GI+ FQ P + + ++ V + G+K +E + + L
Sbjct: 138 VAGLDVVREAREVRRRIGIV--FQDPSVDRDLTAYENML-VHGGVYGLKGKELKEKIERL 194
Query: 120 NKAKELW-FDDKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSVI 178
K ELW F DK ++ F SGG ++RLE+ ++LL P++L LDEP G+D + + +
Sbjct: 195 LKFVELWEFRDKLVKYF-----SGGMQRRLEIARSLLHHPEVLFLDEPTIGLDPQTRAHV 249
Query: 179 SRKIEEL-HNRGVSIILITHYGRIFGHIDKEKL--KVHVMKDGKIVKSGGSE 227
IE + + ++I L THY + EKL +V ++ G+I+ G E
Sbjct: 250 WSYIEAMKEEQDMTIFLTTHYME-----EAEKLADRVAIIDHGRIIAEGSVE 296
>gi|10955064 motB [Agrobacterium tumefaciens] >gi|3064078|gb|AAC18650.1|
(AF242881) motB [Agrobacterium tumefaciens]
Length = 394
Score = 88.2 bits (215), Expect = 9e-17
Identities = 64/232 (27%), Positives = 120/232 (51%), Gaps = 12/232 (5%)
Query: 15 EILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKIIFNGEDITSSSPDE 74
++L INL + GEF ++GP+GSGK+TL +T+AG + G + F E++ +P
Sbjct: 57 KVLSDINLHIRSGEFMTLLGPSGSGKTTLLMTLAGF--IRPDFGSLKFGEEEVILRAPHL 114
Query: 75 RARKGILLAFQVPPEIEGVRILDFLIQVLTEIKGMKPEEAYDVVLNKAKELWFDDKDMRR 134
R + + + P + ++ I +I+G E V + + + RR
Sbjct: 115 RGVGMMFQNYALFPHMS----VEANIAYPLKIRGEDRETIKARVRDVLETVQLGGYGSRR 170
Query: 135 FVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSVISRKIEELHNR-GVSII 193
+ SGG+R+R+ L +A++ +PK+LL+DEP S +D + ++ ++ +H + G++ +
Sbjct: 171 ISEL--SGGQRQRIALARAIVFKPKILLMDEPLSALDKNLRELMQLELRTMHEQLGMTTV 228
Query: 194 LITHYGRIFGHIDKEKLKVHVMKDGKIVKSGGSEIIDMIEREGFKAIFGGEN 245
L+TH R + ++ V+++GKI + SE + F A F GE+
Sbjct: 229 LVTHDQREALTMSD---RIAVLRNGKIAQIDTSETLYSEPNSEFVAAFMGES 277
>pir||H71066 probable ATP-binding transport protein - Pyrococcus horikoshii
>gi|3257647|dbj|BAA30330.1| (AP000005) 253aa long
hypothetical ATP-binding transport protein [Pyrococcus
horikoshii]
Length = 253
Score = 88.2 bits (215), Expect = 9e-17
Identities = 64/237 (27%), Positives = 122/237 (51%), Gaps = 14/237 (5%)
Query: 1 MLKIEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKI 60
M+ +E+L + +E+L+GIN VNDGE + ++GPNGSGKST ++G +GK+
Sbjct: 1 MIIVENLRKKFGSKEVLKGINFTVNDGEIYGLLGPNGSGKSTTMRILSG--IITDFEGKV 58
Query: 61 IFNGEDITSSSPDERARKGILLAFQVPPEIEGVRILDFLIQVLTEIKGMK--PEEAYDVV 118
+ G D+ S + ++ + + P E + +F + I G++ P++ +
Sbjct: 59 MVAGVDV--SRDPMKVKEIVGYVPETPALYESLTPAEF----FSFIGGVRRIPQDILEER 112
Query: 119 LNKAKELWFDDKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSVI 178
+ + + + K M + + S G ++++ L+ ALL +P++L+LDE +G+D S +
Sbjct: 113 VKRLVDAFGIGKYMNQLIGT-LSFGTKQKISLISALLHDPQVLILDEAMNGLDPKSARIF 171
Query: 179 SRKIEELHNRGVSIILITHYGRIFGHIDKEKLKVHVMKDGKIVKSGGSEIIDMIERE 235
+ E G SI+ TH I + ++ ++ +G+IV G + + I RE
Sbjct: 172 RELLFEFKEEGKSIVFSTH---ILALAEVMCDRIGIIYEGRIVAEGTIDELREIARE 225
>pir||C81208 ABC transporter, ATP-binding protein NMB0356 [imported] - Neisseria
meningitidis (group B strain MD58)
>gi|7225578|gb|AAF40799.1| (AE002392) ABC transporter,
ATP-binding protein [Neisseria meningitidis MC58]
Length = 254
Score = 88.2 bits (215), Expect = 9e-17
Identities = 64/246 (26%), Positives = 125/246 (50%), Gaps = 14/246 (5%)
Query: 2 LKIEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKII 61
L +++L + R++++ +L + GE ++GPNG+GK+T I G G +
Sbjct: 18 LVVQNLQKSFKKRQVVKSFSLEIESGEVIGLLGPNGAGKTTSFYMIVG--LIAADAGSVT 75
Query: 62 FNGEDITSSSPDERARKGILLAFQVPPEIEGVR--ILDFLIQVLTEIKGMKPEEAYDVVL 119
+G+++ ERAR G+ +P E R ++ I+ + EI+ + +
Sbjct: 76 LDGQELRHLPIHERARLGV---GYLPQEASIFRKMTVEQNIRAILEIRTKDKNQIDREIE 132
Query: 120 NKAKELWFDDKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSVIS 179
+L + +RR SGGER+R+E+ + L ++P +LLDEP +GVD ++ I
Sbjct: 133 KLLADL--NIGHLRRSPAPSLSGGERRRVEIARVLAMKPHFILLDEPFAGVDPIAVIDIQ 190
Query: 180 RKIEELHNRGVSIILITHYGRIFGHIDKEKLKVHVMKDGKIVKSGGSEIIDMIEREGFKA 239
+ I L +RG+ +++ H R I + +++ DG ++ SG + D++ E ++
Sbjct: 191 KIIGFLKSRGIGVLITDHNVRETLSICD---RAYIISDGTVLASGKPD--DLVGNEQVRS 245
Query: 240 IFGGEN 245
++ G+N
Sbjct: 246 VYLGKN 251
>pir||A69095 cobalt transport ATP-binding protein O - Methanobacterium
thermoautotrophicum (strain Delta H)
>gi|2622836|gb|AAB86176.1| (AE000928) cobalt transport
ATP-binding protein O [Methanobacterium
thermoautotrophicum]
Length = 311
Score = 87.8 bits (214), Expect = 1e-16
Identities = 62/226 (27%), Positives = 118/226 (51%), Gaps = 9/226 (3%)
Query: 1 MLKIEDLHVEV-EGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGK 59
M+++ DL +G LRGIN+ V GE ++GPNG+GKSTL L + G K G+
Sbjct: 1 MIELRDLSYSYPDGTPALRGINMKVERGERVAVIGPNGAGKSTLFLHLNGI--LKPAAGE 58
Query: 60 IIFNGEDITSSSPDE-RARKGILLAFQVPPEIEGVRILDFLIQVLTEIKGMKPEEAYDVV 118
+I +GE + S + + R+ + + FQ P + + + G+ +E + V
Sbjct: 59 VIIDGERVDYSKDELIKIRQKVGIVFQNPDDQLFSPTVREDVAFGPMNLGLPEDEVEERV 118
Query: 119 LNKAKELWFDDKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSVI 178
+++ + R ++ SGGE+KR+ + L ++P++++LDEP +G+D ++ I
Sbjct: 119 AESLEKVGMSGYENRAPHHL--SGGEKKRVAIAGILAMKPEIMVLDEPTTGLDPETADGI 176
Query: 179 SRKIEELHNRGVSIILITHYGRIFGHIDKEKLKVHVMKDGKIVKSG 224
R + EL G+++++ +H I + +V V+ G+++ G
Sbjct: 177 IRILLELSREGITVMISSHDVEIISQFAE---RVFVLNSGELIAEG 219
>pir||A48362 hypothetical protein 280 (rpoN 5' region) - Alcaligenes eutrophus
>gi|38784|emb|CAA47286.1| (X66793) ORF280 [Ralstonia
eutropha]
Length = 280
Score = 87.8 bits (214), Expect = 1e-16
Identities = 66/250 (26%), Positives = 122/250 (48%), Gaps = 17/250 (6%)
Query: 2 LKIEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKII 61
L + L R +++ ++L V GE ++GPNG+GK+T I G + +G I+
Sbjct: 39 LVVRHLKKRYGSRTVVKDVSLDVKSGEVVGLLGPNGAGKTTSFYMIVG--LVALDEGDIV 96
Query: 62 FNGEDITSSSPDERARKGILLAFQVPPEIEGVRILDFL--IQVLTEIKGMKPEEAYDVVL 119
+G+ I+ ERA G+ +P E R L+ I+ + E++ + +
Sbjct: 97 LDGDHISGLPIHERAPMGLSY---LPQEASVFRKLNVEENIRAVLELQVSNGKPLPKAEI 153
Query: 120 NKAKELWFDDKDMRRFVN---VGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLS 176
+ + DD + N + SGGER+R+E+ +AL P+ +LLDEP +GVD ++
Sbjct: 154 ERRLDSLLDDLQIAHLRNNPALSLSGGERRRVEIARALASSPRFILLDEPFAGVDPIAVG 213
Query: 177 VISRKIEELHNRGVSIILITHYGR-IFGHIDKEKLKVHVMKDGKIVKSGGSEIIDMIERE 235
I R + L R + +++ H R G D +++ +G ++ +G E ++I +
Sbjct: 214 EIQRIVSFLKARNIGVLITDHNVRETLGICD----HAYIISEGTVLAAGQPE--EIIAND 267
Query: 236 GFKAIFGGEN 245
+ ++ GEN
Sbjct: 268 AVRRVYLGEN 277
>sp|Q58762|YD67_METJA HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PROTEIN MJ1367
>gi|2129296|pir||F64470 sulfate permease (cysA) -
Methanococcus jannaschii >gi|1592011|gb|AAB99375.1|
(U67576) sulfate transport ATP-binding protein (cysA)
[Methanococcus jannaschii]
Length = 297
Score = 87.4 bits (213), Expect = 1e-16
Identities = 66/218 (30%), Positives = 108/218 (49%), Gaps = 41/218 (18%)
Query: 26 DGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKIIFNGEDITSSSPDERARKGILLAFQ 85
D E+ VI+GP+G+GKS L IAG K G+II NGEDIT+ P++R + +
Sbjct: 24 DREYCVILGPSGAGKSVLIKCIAGI--LKPDSGRIILNGEDITNLPPEKRNVGYVPQNYA 81
Query: 86 VPPEIEGVRILDFLIQVLTEIKGMKPEEAYDVVLNKAKELWFDDK--DMRRFVNVG---- 139
+ P K + AY +++ K +L D K ++ F+N+
Sbjct: 82 LFPN-----------------KNVYKNIAYGLIIKKVNKLEIDRKVKEIAEFLNISHLLN 124
Query: 140 -----FSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSVISRKIEELHNRGVSIIL 194
SGGE++R+ L +AL+L P +LLLDEP S VD+ I +++++ + + ++
Sbjct: 125 RDVKTLSGGEQQRVALARALILNPSILLLDEPTSAVDIKIKESIISELKKI--KHIPVLH 182
Query: 195 ITH---YGRIFGHIDKEKLKVHVMKDGKIVKSGGSEII 229
ITH R G KV + +G+++ G I+
Sbjct: 183 ITHDLAEARTLGE------KVGIFMNGELIAFGDKSIL 214
>pir||H72342 ABC transporter, ATP-binding protein - Thermotoga maritima (strain
MSB8) >gi|4981229|gb|AAD35787.1|AE001742_2 (AE001742)
ABC transporter, ATP-binding protein [Thermotoga
maritima]
Length = 228
Score = 87.4 bits (213), Expect = 1e-16
Identities = 65/229 (28%), Positives = 123/229 (53%), Gaps = 22/229 (9%)
Query: 1 MLKIEDLHVEVEGRE---ILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTK 57
++++ +L E G+E L+GINL +N GEF VI+GP+GSGK+TL ++G + T+
Sbjct: 4 LIEVHNLWKEYNGKEKVTALKGINLRINTGEFVVILGPSGSGKTTLLNCLSGVD--RPTR 61
Query: 58 GKIIFNGEDITSSSPDERAR------KGILLAFQVPPEIEGVRILDFLIQVLTEIKGMKP 111
G +I +G D+ + S +ER R + F + P + + ++ + +L G+
Sbjct: 62 GTVIIHGTDLYTLSEEERTRFRAENMGFVFQFFNLVPVLTAIENVELPLLIL----GVNR 117
Query: 112 EEAYDVVLNKAKELWFDDKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVD 171
+EA + +++ K RF SGGE++R+ + +A++ PK++ DEP +D
Sbjct: 118 KEARERAFEILRKVGLAHK-CDRFPE-ELSGGEKQRVAIARAIVHNPKVIWADEPTGALD 175
Query: 172 VDSLSVISRKIEELHNRGVSIILITHYGRIFGHIDKEKLKVHVMKDGKI 220
++ +I + E+ +++++TH RI D +V ++DG+I
Sbjct: 176 NETGRMIIDLLMEMKENS-TLVVVTHDERIAEKAD----RVIRIRDGQI 219
>pir||C72576 probable glutamine transport ATP-binding protein APE1891 -
Aeropyrum pernix (strain K1) >gi|5105583|dbj|BAA80896.1|
(AP000062) 238aa long hypothetical glutamine transport
ATP-binding protein [Aeropyrum pernix]
Length = 238
Score = 87.4 bits (213), Expect = 1e-16
Identities = 72/231 (31%), Positives = 119/231 (51%), Gaps = 14/231 (6%)
Query: 9 VEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKY-KVTKGKIIFNGEDI 67
V G ++L+G++++++ GE VIMGP+GSGKSTL I P+ + G I+F G D+
Sbjct: 2 VSYSGEKVLKGVDVSLSYGEKLVIMGPSGSGKSTLLKAI---PRLVEPDSGSIVFRGVDV 58
Query: 68 T--SSSPDERARKGILLAFQVPPEIEGVRILDFLIQVLTEIKGMKPEEAYDVVLNKAKEL 125
T S S R+ I Q + +L + L + G+ +A + + L
Sbjct: 59 TRLSGSQLRMVRRKIGYLPQSYSLFPHMTVLRNITYPLEKALGLSRRDAEERAVKYLSML 118
Query: 126 WFDDKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSVISRKIEEL 185
+D R + SGG+++R L +AL +EP +LLLDEP S +D +S + + + +
Sbjct: 119 GIEDLAHRHPARL--SGGQQQRAALARALAMEPDILLLDEPTSALDPESRADVLEALFRV 176
Query: 186 HNRGVSIILITHYGRIFGHIDKEKLKVHVMKDGKIVKSGG--SEIIDMIER 234
G ++I++TH K ++ M+DG IVK G SE+++ ER
Sbjct: 177 ATLGKAMIVVTHEA---DFAVKVADRMAFMEDG-IVKEEGKPSELVEGSER 223
>gb|AAF23272.1|AF101263_2 (AF121672) ABC transporter MreA [Staphylococcus aureus]
Length = 261
Score = 87.4 bits (213), Expect = 1e-16
Identities = 59/217 (27%), Positives = 104/217 (47%), Gaps = 42/217 (19%)
Query: 1 MLKIEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKI 60
+ ++++++ + +++L IN+ +N GEF I+GPNG+GKSTL I G + G+I
Sbjct: 10 VFELKNVNYYYDHKKVLENINIKINKGEFLAIVGPNGAGKSTLLKLILG--LLPLQSGEI 67
Query: 61 IFNGEDITSSSPDERARKGILLAFQVPPEIEGVRILDFLIQVLTEIKGMKPEEAYDVVLN 120
G D + + L ++ Q P +VVL+
Sbjct: 68 FVGGIDFKNKKTSIK--------------------LSYVSQKANAFNSGFPASVKEVVLS 107
Query: 121 ---KAKELW--FDDKDMRRFVNV---------------GFSGGERKRLELLQALLLEPKL 160
K K L+ F+ KD + + V SGG+++R+ + +AL+ EP +
Sbjct: 108 GLTKTKRLFQTFNSKDNEKVIKVLERLNISDLIHKNIAELSGGQQQRVMIARALISEPAV 167
Query: 161 LLLDEPDSGVDVDSLSVISRKIEELHNRGVSIILITH 197
L+LDEP +G+D +S +++L G++IIL+TH
Sbjct: 168 LVLDEPTNGIDAKHVSEFYNTLDQLKQEGITIILVTH 204
>dbj|BAB05817.1| (AP001514) ABC transporter (ATP-binding protein) (daunorubicin
resistance) [Bacillus halodurans]
Length = 310
Score = 87.4 bits (213), Expect = 1e-16
Identities = 66/232 (28%), Positives = 120/232 (51%), Gaps = 19/232 (8%)
Query: 1 MLKIEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKI 60
ML+ +L +G+ ++ +N+ +N GE ++GPNG+GKST I+ K T G+I
Sbjct: 1 MLETINLCKTFKGQPAVQEVNMYLNSGESVGLLGPNGAGKSTTISMIS--TLIKPTSGEI 58
Query: 61 IFNGEDITSSSPDERARKGI----LLAFQVPPEIEGVRILDFLIQVLTEIKGMKPEEAYD 116
NG +I S D R G+ L +Q E ++ ++ + + + A +
Sbjct: 59 KLNGINIISHPGDIRKILGVVPQELALYQELSAYENLKFFGSTYKMKGKHLENRIQHALE 118
Query: 117 VVLNKAKELWFDDKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLS 176
+V K ++ KD+ + FSGG ++R+ + ALL EPK+L+LDEP G+D S +
Sbjct: 119 IVGLKDRQ-----KDLVKT----FSGGMKRRINIAAALLHEPKILILDEPTVGIDPQSRN 169
Query: 177 VISRKIEELH-NRGVSIILITHYGRIFGHIDKEKLKVHVMKDGKIVKSGGSE 227
I + L+ N G +++ +HY +++ ++++M G+I+ +G E
Sbjct: 170 HILETVRTLNENEGTTVLYTSHY---MEEVEQLCDRLYIMDHGEIIAAGTKE 218
>pir||D71179 probable sugar ABC transporter - Pyrococcus horikoshii
>gi|3258144|dbj|BAA30827.1| (AP000007) 498aa long
hypothetical sugar transport ATP-binding protein
[Pyrococcus horikoshii]
Length = 498
Score = 87.0 bits (212), Expect = 2e-16
Identities = 63/227 (27%), Positives = 121/227 (52%), Gaps = 14/227 (6%)
Query: 12 EGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKIIFNGEDITSSS 71
+G L+G++ V +GE H ++G NG+GKSTL + G + K TKG++ G+ + +
Sbjct: 15 DGVVALKGVDFTVEEGEIHGLLGENGAGKSTLMRILYG--EIKPTKGEVKVFGDKVEFNG 72
Query: 72 PDERARKGILLAFQVPPEIEGVRILDFL-IQVLTEIKGMKPEEAYDVVLNKAKELWFDDK 130
P + RKGI + +Q I +L+ L + +LT + E + K K++ F
Sbjct: 73 PWDAIRKGIAMVYQHFTLIPTFTVLENLYLSMLTINPNITINEVRKLAKEKMKDIGFSVP 132
Query: 131 --DMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSVISRKIEELHNR 188
D+ + +G ++R+E+++AL+ K+L+LDEP S + + + + + +L
Sbjct: 133 LDDVVEDLPIGI----QQRVEIIKALMANAKILILDEPTSVLTPLEVEELFKTLRKLKEN 188
Query: 189 GVSIILITHYGRIFGHIDKEKLKVHVMKDGKIVKSGGSEIIDMIERE 235
G+++I ITH + I +V V++ G++V G ++ ++ ER+
Sbjct: 189 GITVIFITHKLKEVKEITD---RVTVLRRGEVV--GVAKTKEVSERD 230
>pir||F72756 probable multiple sugar-binding transport ATP-binding protein
APE0043 - Aeropyrum pernix (strain K1)
>gi|5103431|dbj|BAA78952.1| (AP000058) 381aa long
hypothetical multiple sugar-binding transport
ATP-binding protein [Aeropyrum pernix]
Length = 381
Score = 87.0 bits (212), Expect = 2e-16
Identities = 63/228 (27%), Positives = 119/228 (51%), Gaps = 14/228 (6%)
Query: 20 INLAVNDGEFHVIMGPNGSGKSTLALTIAG--HPKYKVTKGKIIFNGEDITSSSPDERAR 77
++L++ DGEF V++GP+G GK+T IAG +P +G+I+ +GED+T P +R
Sbjct: 35 VDLSIKDGEFFVLLGPSGCGKTTTLRLIAGLEYP----DEGRILIDGEDVTFKDPKDRNV 90
Query: 78 KGILLAFQVPPEIEGVRILDFLIQVLTEIKGMKPEEAYDVVLNKAKELWFDDKDMRRFVN 137
+ + + P + + F + + + G+ ++ V+ AK L +D R+
Sbjct: 91 AMVFQNYALYPHMSVFDNIAFTLHLRRKEMGLTKDDIRRRVIEVAKLLRIEDLLDRKPGQ 150
Query: 138 VGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSVISRKIEELH-NRGVSIILIT 196
+ SGG+++R+ L +AL+ PK+ L+DEP S +D + ++++L + ++ + +T
Sbjct: 151 L--SGGQQQRVALARALVRRPKVWLMDEPLSNLDALLRLAMRAELKKLQKDLKITTVYVT 208
Query: 197 H-YGRIFGHIDKEKLKVHVMKDGKIVKSGGSEIIDMIEREGFKAIFGG 243
H D ++ VM G++V+ G E + M + F A F G
Sbjct: 209 HDQAEAMSMAD----RIAVMNKGRVVQVGTPEEVYMRPKHTFVATFIG 252
>pir||E81936 probable amino acid permease ATP-binding protein NMA0900 [imported]
- Neisseria meningitidis (group A strain Z2491)
>gi|7379613|emb|CAB84178.1| (AL162754) putative amino
acid permease ATP-binding protein [Neisseria
meningitidis Z2491]
Length = 242
Score = 87.0 bits (212), Expect = 2e-16
Identities = 49/198 (24%), Positives = 104/198 (51%), Gaps = 5/198 (2%)
Query: 1 MLKIEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKI 60
M+K +++H + ++ G+NL + GE V+ GP+GSGKSTL T+ + + G+I
Sbjct: 1 MIKFKNVHKHFKDLHVINGVNLEIKKGEVVVVCGPSGSGKSTLIRTV--NQLESIESGEI 58
Query: 61 IFNGEDITSSSPD-ERARKGILLAFQVPPEIEGVRILDFLIQVLTEIKGMKPEEAYDVVL 119
+G ++ D + R+ + FQ + +L+ + ++KG E+A +
Sbjct: 59 WVDGVNVADPKTDLNKIREEVGFVFQSFNLYPHLTVLENITLAPMKVKGQNAEQAEKKAM 118
Query: 120 NKAKELWFDDKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSVIS 179
+ + K + SGG+++R+ + + L +EP+++L DEP S +D + + +
Sbjct: 119 ELLERVGLAHK--KDAFPSQLSGGQQQRVAIARGLAMEPRVMLFDEPTSALDPEMVGEVL 176
Query: 180 RKIEELHNRGVSIILITH 197
+ +++L G++++ +TH
Sbjct: 177 KVMKDLAESGMTMMCVTH 194
>dbj|BAB06841.1| (AP001517) ABC transporter (ATP-binding protein) [Bacillus
halodurans]
Length = 227
Score = 87.0 bits (212), Expect = 2e-16
Identities = 64/233 (27%), Positives = 120/233 (51%), Gaps = 22/233 (9%)
Query: 1 MLKIE----DLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVT 56
M+K+E V E EIL I+L + G+F IMGP+GSGKSTL + I G + T
Sbjct: 1 MIKLERVTKSFRVGTEMVEILSAIDLEIASGDFLAIMGPSGSGKSTL-MNIIGCLD-QPT 58
Query: 57 KGKIIFNGEDITSSSPDERARKG------ILLAFQVPPEIEGVRILDFLIQVLTEIKGMK 110
G+ +F+G+D+T+ S E A+ + F + P + ++ +++ GMK
Sbjct: 59 SGRYMFDGKDLTNYSEQEIAKIRNRHIGFVFQQFHLLPRLTALQN----VELPMVYAGMK 114
Query: 111 PEEAYDVVLNKAKELWFDDKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGV 170
+E + + + + ++ ++ SGG+++R+ + ++++ EP ++L DEP +
Sbjct: 115 KKERTERAAHALERVGLAER--MTYLPNSLSGGQKQRVAIARSIVNEPNIILADEPTGAL 172
Query: 171 DVDSLSVISRKIEELHNRGVSIILITHYGRIFGHIDKEKLKVHVMKDGKIVKS 223
D + I + L+N G +I L+TH I + + ++DG+IV++
Sbjct: 173 DTKTSETIMELLCSLNNEGTTIALVTHEPEIAEYTQQTVF----VRDGQIVET 221
>gi|11498338 cobalt transport ATP-binding protein (cbiO-1) [Archaeoglobus
fulgidus] >gi|7445658|pir||C69341 cobalt transport
ATP-binding protein (cbiO-1) homolog - Archaeoglobus
fulgidus >gi|2649880|gb|AAB90507.1| (AE001054) cobalt
transport ATP-binding protein (cbiO-1) [Archaeoglobus
fulgidus]
Length = 326
Score = 86.6 bits (211), Expect = 3e-16
Identities = 66/245 (26%), Positives = 112/245 (44%), Gaps = 8/245 (3%)
Query: 1 MLKIEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKI 60
M++ DLH E+L+G+N G+ V+MG NG+GK+TL + G + K GK+
Sbjct: 34 MIEAVDLHFCYGDAEVLKGVNFKAERGKVTVLMGRNGAGKTTLLKHLNGLLRPK--SGKV 91
Query: 61 IFNGEDITSSSPDE-RARKGILLAFQVPPEIEGVRILDFLIQVLTEIKGMKPEEAYDVVL 119
I +G ++ RK + FQ P + + + G+K E VV
Sbjct: 92 IIDGRELKYDRKSLLEVRKRVFYVFQNPDDQILSPTVWQDVAFGPRNLGLKGERLERVVR 151
Query: 120 NKAKELWFDDKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSVIS 179
N + + + R + SGGE++RL + AL + P ++DEP + VD + L +I+
Sbjct: 152 NALEAVGLSGYEKRLCSTL--SGGEKRRLAIASALAMNPDYCIMDEPSANVDGEGLRMIA 209
Query: 180 RKIEELHNRGVSIILITHYGRIFGHIDKEKLKVHVMKDGKIVKSGGSEIIDMIEREGFKA 239
I +L G +++ TH + + + M DGKIV G + + G ++
Sbjct: 210 EIIRKLREEGKGVVVSTHDADLAKEVGD---YFYFMDDGKIVWEGEEFSYSVARKLGIRS 266
Query: 240 IFGGE 244
G+
Sbjct: 267 FSLGK 271
>pir||B70327 ABC transporter - Aquifex aeolicus >gi|2982983|gb|AAC06596.1|
(AE000682) ABC transporter [Aquifex aeolicus]
Length = 224
Score = 86.6 bits (211), Expect = 3e-16
Identities = 73/227 (32%), Positives = 119/227 (52%), Gaps = 18/227 (7%)
Query: 1 MLKIEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTL--ALTIAGHPKYKVTKG 58
+L+ E++ + G EIL+GI+L+V GEF I+G +GSGKSTL L + P T+G
Sbjct: 4 ILRAENIKKVIRGYEILKGISLSVKKGEFVSIIGASGSGKSTLLYILGLLDAP----TEG 59
Query: 59 KIIFNGEDITSSSPDE----RARKGILLAFQVPPEIEGVRILDFLIQVLTEIKGMKPEEA 114
K+ G+++ ++ E R RK + FQ I + L+ +I + ++ G +EA
Sbjct: 60 KVFLEGKEVDYTNEKELSLLRNRK-LGFVFQFHYLIPELTALENVIVPMLKM-GKPKKEA 117
Query: 115 YDVVLNKAKELWFDDKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDS 174
+ EL DK R+ + SGGE++R+ + +AL EP LL DEP +D +
Sbjct: 118 KERGEYLLSELGLGDKLSRKPYEL--SGGEQQRVAIARALANEPILLFADEPTGNLDSAN 175
Query: 175 LSVISRKIEELHNRGVSIILITHYGRIFGHIDKEKLKVHVMKDGKIV 221
+ +++ G SI+++TH R + L+ MKDGK+V
Sbjct: 176 TKRVMDIFLKINEGGTSIVMVTH-ERELAELTHRTLE---MKDGKVV 218
>pir||G81168 amino acid ABC transporter, ATP-binding protein NMB0696 [imported]
- Neisseria meningitidis (group B strain MD58)
>gi|7225924|gb|AAF41113.1| (AE002424) amino acid ABC
transporter, ATP-binding protein [Neisseria meningitidis
MC58]
Length = 242
Score = 86.6 bits (211), Expect = 3e-16
Identities = 49/198 (24%), Positives = 104/198 (51%), Gaps = 5/198 (2%)
Query: 1 MLKIEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKI 60
M+K +++H + ++ G+NL + GE V+ GP+GSGKSTL T+ + + G+I
Sbjct: 1 MIKFKNVHKHFKDLHVINGVNLEIKKGEVVVVCGPSGSGKSTLIRTV--NQLESIESGEI 58
Query: 61 IFNGEDITSSSPD-ERARKGILLAFQVPPEIEGVRILDFLIQVLTEIKGMKPEEAYDVVL 119
+G ++ D + R+ + FQ + +L+ + ++KG E+A +
Sbjct: 59 WVDGVNVADPKTDLNKIREEVGFVFQGFNLYPHLTVLENITLAPMKVKGQNAEQAEKKAM 118
Query: 120 NKAKELWFDDKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSVIS 179
+ + K + SGG+++R+ + + L +EP+++L DEP S +D + + +
Sbjct: 119 ELLERVGLAHK--KDAFPSQLSGGQQQRVAIARGLAMEPRVMLFDEPTSALDPEMVGEVL 176
Query: 180 RKIEELHNRGVSIILITH 197
+ +++L G++++ +TH
Sbjct: 177 KVMKDLAESGMTMMCVTH 194
>pir||F71849 amino acid ABC transporter, ATP-binding protein - Helicobacter
pylori (strain J99) >gi|4155696|gb|AAD06680.1|
(AE001537) AMINO ACID ABC TRANSPORTER, ATP-BINDING
PROTEIN [Helicobacter pylori J99]
Length = 248
Score = 86.2 bits (210), Expect = 3e-16
Identities = 56/228 (24%), Positives = 115/228 (49%), Gaps = 8/228 (3%)
Query: 1 MLKIEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKI 60
+L+ + L + +L GIN +N GE VI+GP+G GKST + G K + +G+I
Sbjct: 4 ILETKGLKKTYQNHLVLDGINFTLNKGEVAVILGPSGCGKSTFLKCLNGLEK--IDEGEI 61
Query: 61 IFNGEDITSSSPD-ERARKGILLAFQVPPEIEGVRILDFLIQVLTEIKGMKPEEAYDVVL 119
+F ++ + S + + R+ I + FQ + +LD ++ +++ +E +
Sbjct: 62 LFENTNLNTPSTNWNQMRQKIGMVFQNYELFPHLNVLDNILLAPLKVQKRSKDEVLSQAV 121
Query: 120 NKAKELWFDDKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSVIS 179
K + + K ++ SGG+++R+ ++++L + PK++L DE + +D + + +
Sbjct: 122 ELLKRVGLEHK--QQAYPKELSGGQKQRVAIVRSLCMRPKIMLFDEVTASLDPEMVKEVL 179
Query: 180 RKIEELHNRGVSIILITHYGRIFGHIDKEKLKVHVMKDGKIVKSGGSE 227
I EL G+S++++TH + K K+ GKI + ++
Sbjct: 180 EVILELAKTGMSMVIVTHEMKF---AQKIASKIVFFDSGKIAEENSAK 224
>pir||E72757 probable phosphate transport ATP-binding protein pstB APE0050 -
Aeropyrum pernix (strain K1) >gi|5103438|dbj|BAA78959.1|
(AP000058) 253aa long hypothetical phosphate transport
ATP-binding protein pstB [Aeropyrum pernix]
Length = 253
Score = 86.2 bits (210), Expect = 3e-16
Identities = 70/253 (27%), Positives = 127/253 (49%), Gaps = 16/253 (6%)
Query: 2 LKIEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGH----PKYKVTK 57
+++ L+V + + IL+GI+ G IMGP+GSGKSTL I P +V +
Sbjct: 6 VRVSGLNVWITDKHILKGISFKAQPGTVTAIMGPSGSGKSTLIRVINRLIDLIPGARV-E 64
Query: 58 GKIIFNGEDITSSSPDERARKGILLAFQVPPEIEGVRILDFLIQVLTEIKGM-KPEEAYD 116
G++ N ++ P R+ + FQ P + I + + + ++ G+ K ++ D
Sbjct: 65 GEVWINNMNVMKEDP-YNIRRYTGMVFQEPNPFPHMTIYEN-VAIGPKLHGLAKNKKELD 122
Query: 117 VVLN---KAKELWFDDKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVD-V 172
++ K LW + KD SGG+R+RL L +AL L+P++LLLDEP + +D V
Sbjct: 123 EIVEWALKMAHLWDEVKDRLSDYPHQLSGGQRQRLSLARALALKPRVLLLDEPTANIDPV 182
Query: 173 DSLSVISRKIEELHNRGVSIILITHYGRIFGHIDKEKLKVHVMKDGKIVKSGGS-EIIDM 231
++ + +E ++I++TH + I + L ++ +G++++ G + E++
Sbjct: 183 STVKIEQSIVEYAKEEMATVIIVTHTPQQAARISDQILFLY---EGRVIEYGPTKELVLR 239
Query: 232 IEREGFKAIFGGE 244
E K GGE
Sbjct: 240 PRHELTKKFLGGE 252
>pir||C64666 glutamine transport protein glnQ - Helicobacter pylori (strain
26695) >gi|2314330|gb|AAD08217.1| (AE000623) glutamine
ABC transporter, ATP-binding protein (glnQ)
[Helicobacter pylori 26695]
Length = 248
Score = 85.8 bits (209), Expect = 4e-16
Identities = 55/228 (24%), Positives = 115/228 (50%), Gaps = 8/228 (3%)
Query: 1 MLKIEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKI 60
+L+ + L + +L GIN +N GE VI+GP+G GKST + G K + +G+I
Sbjct: 4 ILETKGLKKTYQNHLVLDGINFTLNKGEVAVILGPSGCGKSTFLKCLNGLEK--INEGEI 61
Query: 61 IFNGEDITSSSPD-ERARKGILLAFQVPPEIEGVRILDFLIQVLTEIKGMKPEEAYDVVL 119
+F ++ + + + + R+ I + FQ + +LD ++ +++ +E +
Sbjct: 62 LFENTNLNNKATNWNQMRQKIGMVFQNYELFPHLNVLDNILLAPMKVQKRSKDEVISQAI 121
Query: 120 NKAKELWFDDKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSVIS 179
K + + K ++ SGG+++R+ ++++L + PK++L DE + +D + + +
Sbjct: 122 ELLKRVGLEHK--QQAYPKELSGGQKQRVAIVRSLCMRPKIMLFDEVTASLDPEMVKEVL 179
Query: 180 RKIEELHNRGVSIILITHYGRIFGHIDKEKLKVHVMKDGKIVKSGGSE 227
I EL G+S++++TH + K K+ GKI + ++
Sbjct: 180 EVILELATTGMSMVIVTHEMKF---AQKIAHKIVFFDSGKIAEENNAK 224
>gi|11498042 iron (III) ABC transporter, ATP-binding protein (hemV-1)
[Archaeoglobus fulgidus] >gi|7445946|pir||F69303 iron
(III) ABC transporter, ATP-binding protein (hemV-1)
homolog - Archaeoglobus fulgidus
>gi|2650201|gb|AAB90807.1| (AE001075) iron (III) ABC
transporter, ATP-binding protein (hemV-1) [Archaeoglobus
fulgidus]
Length = 248
Score = 85.8 bits (209), Expect = 4e-16
Identities = 72/251 (28%), Positives = 124/251 (48%), Gaps = 25/251 (9%)
Query: 1 MLKIEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKI 60
M+++ L+ + +++ + GEF I+GPNGSGK+TL +AG K KG +
Sbjct: 1 MIEVRSLYYSYNSKPVIQDLEFEAERGEFVFILGPNGSGKTTLLKCMAGILK---PKGAV 57
Query: 61 IFNGEDITSSSPDERARKGILLAFQVPPEIEG--VRILDFLIQVLTEIKGMKP-EEAYDV 117
+ I S + ARK LA+ VP + + + D ++ G P +E Y +
Sbjct: 58 LVEKVSIDRLSGRDLARK---LAY-VPQRSDSGFLTVYDVVLLGRRPYMGFSPSDEDYRI 113
Query: 118 VLNKAKELWFDDKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSV 177
V + L RR + SGGE +++ + +AL +PK+LLLDEP + +DV +
Sbjct: 114 VEDVLSLLDLKKFSYRRINEL--SGGELQKVMIARALAQKPKILLLDEPTNNLDVKNQIE 171
Query: 178 ISRKIEEL-HNRGVSIILITH---YGRIFGHIDKEKLKVHVMKDGKIVKSGGSEIIDMIE 233
I + + ++ + +S+I H IF K+ ++K+G+I SGG E+ +
Sbjct: 172 IMKLLRKIADEKEISVISTMHDLNLAAIFAD------KIVMLKNGRIFASGGKEV---LT 222
Query: 234 REGFKAIFGGE 244
+E K ++G E
Sbjct: 223 QENIKEVYGIE 233
>gb|AAK40809.1| Phosphate ABC transporter, ATP-binding protein [Sulfolobus
solfataricus]
Length = 257
Score = 85.4 bits (208), Expect = 6e-16
Identities = 67/237 (28%), Positives = 119/237 (49%), Gaps = 15/237 (6%)
Query: 1 MLKIEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAG-----HPKYKV 55
+ I L++ + + IL+ I + + + IMGP+GSGKSTL + K KV
Sbjct: 10 VFNISRLYLYINDKAILKDITIKIPNNSIFGIMGPSGSGKSTLLKVLNRLIEIYDSKIKV 69
Query: 56 TKGKIIFNGEDITSSSPDERARKGILLAFQVPPEIEGVRILDFLIQVLTEIKGMKPEEAY 115
GK+++ G+DI + RK + + FQ P + I D + L G+K +
Sbjct: 70 D-GKVLYFGKDIFQIDAI-KLRKEVGMVFQQPNPFPHLSIYDNIAYPLKS-HGIKEKREI 126
Query: 116 DVVLNKAKE---LWFDDKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDV 172
++ + LW + D SGG+++RL + +AL L+PK+LL+DEP S +D+
Sbjct: 127 KKIVEECLRKVGLWKEVYDRLNSPASQLSGGQQQRLTIARALALKPKVLLMDEPTSMIDI 186
Query: 173 DSLSVISRKIEELHNRGVSIILITHYGRIFGHIDKEKLKVHVMKDGKIVKSGGSEII 229
+ I + I EL N ++I++++H + + + V + +G++V+ G S I
Sbjct: 187 VNSQAIEKLITELKNE-IAIVIVSHNPQ---QVARVADYVAFLYNGELVEWGSSNEI 239
>pir||S76552 hypothetical protein - Synechocystis sp. (strain PCC 6803)
>gi|1001664|dbj|BAA10398.1| (D64002) high-affinity
branched-chain amino acid transport ATP-binding protein
[Synechocystis sp.]
Length = 249
Score = 85.4 bits (208), Expect = 6e-16
Identities = 69/250 (27%), Positives = 122/250 (48%), Gaps = 27/250 (10%)
Query: 1 MLKIEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKI 60
ML+I DL+V ILR +++++ G+ ++G NG GK+TL TI G G +
Sbjct: 17 MLQISDLNVYYGESHILRNVDMSIAPGQMVCLIGRNGVGKTTLLKTIMG--LLSPRSGYV 74
Query: 61 IFNGEDITSSSPDERARKGILLAFQVPPEIEGVRILDFLIQVLTEI-------KGMKPEE 113
++ + S D+RAR GI Q I + + + L+ L KG+ P+E
Sbjct: 75 VYGDRQLNSVPTDKRARLGIGYVPQGREIIPRLTVQENLLLGLEACADKSQRQKGI-PDE 133
Query: 114 AYDV--VLNKAKELWFDDKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVD 171
+++ VL W D SGG++++L + +AL+ +PKLLLLDEP G+
Sbjct: 134 IFELFPVLKTMLSRWGGD----------LSGGQQQQLAIARALMGQPKLLLLDEPTEGIQ 183
Query: 172 VDSLSVISRKIEE-LHNRGVSIILITHYGRIFGHIDKEKLKVHVMKDGKIVKSGGSEIID 230
+ I ++ + G+S++L+ + H ++ + + M+ G IV SG ++ +
Sbjct: 184 PSIILEIEAAVKRIIAATGISVLLVEQH----LHFVRQADRYYAMQKGGIVASGETQTLS 239
Query: 231 MIEREGFKAI 240
+ F A+
Sbjct: 240 QEVIQKFLAV 249
>pir||C71220 probable sugar-binding transport ATP-binding protein - Pyrococcus
horikoshii >gi|3256407|dbj|BAA29090.1| (AP000001) 373aa
long hypothetical sugar-binding transport ATP-binding
protein [Pyrococcus horikoshii]
Length = 373
Score = 85.4 bits (208), Expect = 6e-16
Identities = 65/245 (26%), Positives = 124/245 (50%), Gaps = 16/245 (6%)
Query: 2 LKIEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKII 61
+K+E+L + +NL + DGEF V++GP+G GK+T IAG + T+G+I
Sbjct: 13 VKLENLTKRFGNFTAVNKLNLTIKDGEFLVLLGPSGCGKTTTLRMIAG--LEEPTEGRIY 70
Query: 62 FNGEDITSSSPDERARKGILLAFQVPPEIEGVRILDFLIQVLTEIKGMKPEEAYDVVLNK 121
F D+T P +R + ++ V P + + F +++ P++ D +
Sbjct: 71 FGDRDVTYLPPKDRNISMVFQSYAVWPHMTVYENIAFPLKI-----KKFPKDEIDKRVRW 125
Query: 122 AKELWFDDKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSVISRK 181
A EL ++ + R+ SGG+R+R+ + +A+++EP +LL+DEP S +D + +
Sbjct: 126 AAELLQIEELLNRY-PAQLSGGQRQRVAVARAIVVEPDVLLMDEPLSNLDAKLRVAMRAE 184
Query: 182 IEELHNR-GVSIILITHYGRIFGHIDKEKL--KVHVMKDGKIVKSGGSEIIDMIEREGFK 238
I++L + V+ I +TH ++ + ++ VM G++++ G + + F
Sbjct: 185 IKKLQQKLKVTTIYVTH-----DQVEAMTMGDRIAVMNRGQLLQIGSPTEVYLRPNSVFV 239
Query: 239 AIFGG 243
A F G
Sbjct: 240 ATFIG 244
>pir||G71905 probable ABC transporter, ATP-binding protein - Helicobacter pylori
(strain J99) >gi|4155205|gb|AAD06229.1| (AE001497)
putative abc transporter, ATP-binding protein
[Helicobacter pylori J99]
Length = 240
Score = 85.4 bits (208), Expect = 6e-16
Identities = 70/251 (27%), Positives = 123/251 (48%), Gaps = 22/251 (8%)
Query: 1 MLKIEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKI 60
+LK E L+ +++ +I+ ++L V GE ++GPNG+GK+T I G + + G +
Sbjct: 3 ILKAEHLNKQIKKTKIVSDVSLEVKSGEVVGLLGPNGAGKTTTFYMICG--LLEPSGGSV 60
Query: 61 IFNGEDITSSSPDERARKGILLAFQVPPEIEGVRILDFLIQV--LTEIKGMKPEEAYDVV 118
N D+ +R+ GI Q + + + + L T + EE + +
Sbjct: 61 YLNDVDLAKYPLHKRSNLGIGYLPQESSIFKELSVEENLALAGESTFKNSKESEEKMESL 120
Query: 119 LNKAKELWFDDKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSVI 178
L+ F+ + +R + SGGER+R+E+ +AL+ PK +LLDEP +GVD ++ I
Sbjct: 121 LDA-----FNIQAIRERKGMSLSGGERRRVEIARALMKNPKFVLLDEPFAGVDPIAVIDI 175
Query: 179 SRKIEELHNRGVSIILITHYGRIFGHIDKEKLKV----HVMKDGKIVKSGGSEIIDMIER 234
R IE L + +++ H R E L V +V+K G ++ SG + ++ E
Sbjct: 176 QRIIESLIGLNIGVLITDHNVR-------ETLSVCHRAYVIKSGTLLASGNAN--EIYEN 226
Query: 235 EGFKAIFGGEN 245
+ + GEN
Sbjct: 227 ALVRKYYLGEN 237
>pir||G81022 ABC transporter, ATP-binding protein NMB1966 [imported] - Neisseria
meningitidis (group B strain MD58)
>gi|7227226|gb|AAF42295.1| (AE002544) ABC transporter,
ATP-binding protein [Neisseria meningitidis MC58]
Length = 266
Score = 85.4 bits (208), Expect = 6e-16
Identities = 65/248 (26%), Positives = 119/248 (47%), Gaps = 16/248 (6%)
Query: 2 LKIEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKII 61
++++D+ R IL+ IN ++ G F +MG +GSGK+TL I G + + G+++
Sbjct: 7 IEMKDVAFAYGDRPILKNINFSIPQGNFAAVMGGSGSGKTTLMRLITG--QIRPQSGQVL 64
Query: 62 FNGEDITSSSPDE----RARKGILLAFQVPPEIEGVRILDFLIQVLTEIKGMKPEEAYDV 117
G D+ S DE R R G+L FQ + + D + + E+ + D+
Sbjct: 65 IEGRDLAGFSADELYEHRRRMGVL--FQHGALFTDLSVFDNIAFPMRELTRLPEAVIRDL 122
Query: 118 VLNKAKELWFDDKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSV 177
VL K + + + + SGG +R+ L + + L+P+++L DEP +G+D SL V
Sbjct: 123 VLLKLNAVGL--RGVENLMPSELSGGMSRRVALARTIALDPEIMLYDEPFTGLDPISLGV 180
Query: 178 ISRKIEELHN--RGVSIILITHYGRIFGHIDKEKLKVHVMKDGKIVKSGGSEIIDMIERE 235
I+ I ++ R SI++ + +D+ H G+I+ SG + + ++
Sbjct: 181 IAHLISRVNKALRSTSIMVTHDIEKSLEIVDQVIFLAH----GEIMFSGSPQEMRELDSP 236
Query: 236 GFKAIFGG 243
+ GG
Sbjct: 237 WVRQFVGG 244
>pir||B81966 probable ABC transport ATP-binding protein NMA0485 [imported] -
Neisseria meningitidis (group A strain Z2491)
>gi|7379229|emb|CAB83778.1| (AL162753) putative ABC
transport ATP-binding protein [Neisseria meningitidis
Z2491]
Length = 286
Score = 85.4 bits (208), Expect = 6e-16
Identities = 65/248 (26%), Positives = 118/248 (47%), Gaps = 16/248 (6%)
Query: 2 LKIEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKII 61
++++D+ R IL IN ++ G F +MG +GSGK+TL I G + + GK++
Sbjct: 27 IEMKDVAFAYGDRPILNDINFSIPQGNFAAVMGGSGSGKTTLMRLITG--QIRPQSGKVL 84
Query: 62 FNGEDITSSSPDE----RARKGILLAFQVPPEIEGVRILDFLIQVLTEIKGMKPEEAYDV 117
G D+ S DE R R G+L FQ + + D + + E+ + D+
Sbjct: 85 IEGRDLAGFSADELYEHRRRMGVL--FQHGALFTDLSVFDNIAFPMRELTRLPEAVIRDL 142
Query: 118 VLNKAKELWFDDKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSV 177
VL K + + + + SGG +R+ L + + L+P+++L DEP +G+D SL V
Sbjct: 143 VLLKLNAVGL--RGVENLMPSELSGGMSRRVALARTIALDPEIMLYDEPFTGLDPISLGV 200
Query: 178 ISRKIEELHN--RGVSIILITHYGRIFGHIDKEKLKVHVMKDGKIVKSGGSEIIDMIERE 235
I+ I ++ R S+++ + +D+ H G+I+ SG + + ++
Sbjct: 201 IAHLISRVNKALRSTSVMVTHDIEKSLEIVDQVIFLAH----GEIMFSGSPQEMRELDSP 256
Query: 236 GFKAIFGG 243
+ GG
Sbjct: 257 WVRQFVGG 264
>pir||B83037 probable ATP-binding component of ABC transporter PA4862 [imported]
- Pseudomonas aeruginosa (strain PAO1)
>gi|9951135|gb|AAG08247.1|AE004900_1 (AE004900) probable
ATP-binding component of ABC transporter [Pseudomonas
aeruginosa]
Length = 232
Score = 85.4 bits (208), Expect = 6e-16
Identities = 66/241 (27%), Positives = 115/241 (47%), Gaps = 13/241 (5%)
Query: 1 MLKIEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKI 60
ML+++ LH G ILRG++ GE ++G NG GK+TL + G +G++
Sbjct: 1 MLQVDKLHQYYGGSHILRGLSFEAKVGEVTCLLGRNGVGKTTLLRCLMG--LVPAREGQV 58
Query: 61 IFNGEDITSSSPDERARKGILLAFQVPPEIEGVRILDFLIQVLTEIKGMKPEEAYDVVLN 120
+ G +T P +R R GI Q + + + L+ L+ D +
Sbjct: 59 AWEGRSLTGLRPHQRVRAGIAYVPQGREIFPRLTVEENLLMGLSRFSARDARAVPDFIY- 117
Query: 121 KAKELWFDDKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSVISR 180
EL+ ++M++ SGG++++L + +AL +P+LL+LDEP G+ + I
Sbjct: 118 ---ELFPVLREMKQRRGGDLSGGQQQQLAIGRALASQPRLLILDEPTEGIQPSVIKEIGA 174
Query: 181 KIEELHNRG-VSIILITHYGRIFGHIDKEKLKVHVMKDGKIVKSGGSEIIDMIEREGFKA 239
+ L RG ++I+L+ + + + L VM G+IV+ G DM E EG +
Sbjct: 175 VVRSLAARGDMAILLVEQFYDFAAELADQYL---VMARGEIVQQGRGR--DM-ESEGVRG 228
Query: 240 I 240
+
Sbjct: 229 L 229
>pir||C69012 ABC transporter (ATP-binding, daunorubicin resistance) -
Methanobacterium thermoautotrophicum (strain Delta H)
>gi|2622194|gb|AAB85582.1| (AE000880) ABC transporter
(ATP-binding [Methanobacterium thermoautotrophicum]
Length = 312
Score = 85.0 bits (207), Expect = 8e-16
Identities = 66/230 (28%), Positives = 119/230 (51%), Gaps = 23/230 (10%)
Query: 1 MLKIEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKI 60
+++ ED+ + + ++G+NL V +G + ++GPNG+GK+TL + + T G+
Sbjct: 4 IIETEDIKKKYDEFLAVKGVNLRVPEGSIYGVLGPNGAGKTTLISMLC--TILRPTGGRG 61
Query: 61 IFNGEDITSSSPDERARKGILLAFQVPPEI----EGVRILDFLIQVLTEIKGMKPEEAYD 116
NG DI + R GI+ + +I E + + L V +++ + EE +
Sbjct: 62 TVNGYDIVRDARKVRESIGIVFQSRALDDILTGREHLEMHAALYGVPRDVRDRRIEEVLE 121
Query: 117 VVL--NKAKELWFDDKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDS 174
++ +KA E +V +SGG ++RLE+ + L+ P++L LDEP G+D +
Sbjct: 122 LIALGDKADE----------YVKT-YSGGMKRRLEIGRGLIHHPRVLFLDEPTLGLDPQT 170
Query: 175 LSVISRKIEELH-NRGVSIILITHYGRIFGHIDKEKLKVHVMKDGKIVKS 223
I R IE+L+ V+++L THY DK +V +M G+I+K+
Sbjct: 171 RESIWRYIEKLNREEDVTVLLTTHY---MEEADKLCDEVAIMSHGEIIKA 217
>gb|AAD45529.1|AF162655_1 (AF162655) choline transporter [Streptococcus pneumoniae]
Length = 242
Score = 85.0 bits (207), Expect = 8e-16
Identities = 71/251 (28%), Positives = 124/251 (49%), Gaps = 21/251 (8%)
Query: 1 MLKIEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKI 60
M++ +++ + +++LR +NL + DGEF V++GP+GSGK+T+ I + + T G I
Sbjct: 1 MIEYKNVALRYTEKDVLRDVNLQIEDGEFMVLVGPSGSGKTTMLKMI--NRLLEPTDGNI 58
Query: 61 IFNGEDITSSSPDE-RARKG-ILLAFQVPPEIEGVRILDFLIQVLTEIKGMKPEEAYDVV 118
+G+ I E R G +L A + P + I ++ E+KG EE
Sbjct: 59 YMDGKRIKDYDERELRLSTGYVLQAIALFPNLTVAE----NIALIPEMKGWSKEEITKKT 114
Query: 119 LNKAKELWFDDKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSVI 178
++ + + SGGE++R+ +++A++ +PK+ L+DEP S +D S +
Sbjct: 115 EELLAKVGLPVAEYGHRLPSELSGGEQQRVGIVRAMIGQPKIFLMDEPFSALDAISRKQL 174
Query: 179 SRKIEELHNR-GVSIILITHYGRIFGHIDKEKLK----VHVMKDGKIVKSGGSEIIDMIE 233
+ELH G++ I +T H E LK + V++DG+I + E I
Sbjct: 175 QVLTKELHKEFGMTTIFVT-------HDTDEALKLADRIAVLQDGEIRQVANPETILKAP 227
Query: 234 REGFKA-IFGG 243
F A +FGG
Sbjct: 228 ATDFVADLFGG 238
>pir||D83194 polyamine transport protein PotA PA3607 [imported] - Pseudomonas
aeruginosa (strain PAO1)
>gi|9949764|gb|AAG06995.1|AE004781_3 (AE004781)
polyamine transport protein PotA [Pseudomonas
aeruginosa]
Length = 363
Score = 85.0 bits (207), Expect = 8e-16
Identities = 62/226 (27%), Positives = 112/226 (49%), Gaps = 12/226 (5%)
Query: 20 INLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKIIFNGEDITSSSPDERARKG 79
++L +N GEF ++GP+G GK+TL +AG + G+I NG+D+ P++R
Sbjct: 24 VSLTINTGEFFTLLGPSGCGKTTLLRMLAGFDQ--PDSGEIRLNGQDLAGVEPEKRPVHT 81
Query: 80 ILLAFQVPPEIEGVRILDFLIQVLTEIKGMKPEEAYDVVLNKAKELWFDDKDMRRFVNVG 139
+ ++ + P + + + F +++ G+ E V K++ DK R +
Sbjct: 82 VFQSYALFPHMSVAQNIAFPLKMA----GVAKSEIDARVEQALKDVRLADKGGR--MPTQ 135
Query: 140 FSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSVISRKIEELH-NRGVSIILITHY 198
SGG+R+R+ + +AL+ P+LLLLDEP S +D + ++ L + G++ + +TH
Sbjct: 136 LSGGQRQRVAIARALVNRPRLLLLDEPLSALDAKLREEMQIELINLQKDVGITFVYVTHD 195
Query: 199 GRIFGHIDKEKLKVHVMKDGKIVKSGGSEIIDMIEREGFKAIFGGE 244
G ++ VM G++ + E I R F A F G+
Sbjct: 196 Q---GEALALSHRIAVMNQGRVEQLDAPETIYSFPRSRFVADFIGQ 238
>pir||F83122 probable ATP-binding component of ABC transporter PA4192 [imported]
- Pseudomonas aeruginosa (strain PAO1)
>gi|9950402|gb|AAG07579.1|AE004835_8 (AE004835) probable
ATP-binding component of ABC transporter [Pseudomonas
aeruginosa]
Length = 247
Score = 85.0 bits (207), Expect = 8e-16
Identities = 56/198 (28%), Positives = 101/198 (50%), Gaps = 5/198 (2%)
Query: 1 MLKIEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKI 60
M+++E ++ L ++ V GE V+ GP+GSGKSTL T+ + + G+I
Sbjct: 1 MIRLEKVNKWYGAYHALADVDEQVGRGEVVVVCGPSGSGKSTLIRTL--NRLEPIQGGRI 58
Query: 61 IFNGEDITSSSPD-ERARKGILLAFQVPPEIEGVRILDFLIQVLTEIKGMKPEEAYDVVL 119
+ +G+DI + D R R I FQ + +LD ++G+KP EA +
Sbjct: 59 LIDGQDIHAPGLDLNRFRSHIGFVFQQFNLFPHLNVLDNCTLASLRLRGLKPAEARRQAM 118
Query: 120 NKAKELWFDDKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSVIS 179
+ + DK SGG+++R+ + +AL +EP L+L DEP S +D + + +
Sbjct: 119 ALLERVGLADKAAA--FPARLSGGQQQRVAIARALAMEPPLMLFDEPTSALDPEMVGEVL 176
Query: 180 RKIEELHNRGVSIILITH 197
+ +L G++++++TH
Sbjct: 177 LVMRDLARDGMTMVVVTH 194
>dbj|BAB03967.1| (AP001507) ABC transporter (ATP-binding protein) [Bacillus
halodurans]
Length = 267
Score = 85.0 bits (207), Expect = 8e-16
Identities = 67/235 (28%), Positives = 116/235 (48%), Gaps = 22/235 (9%)
Query: 1 MLKIEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKI 60
+LK L V+ G +R + + +GE H ++GPNG+GK+T I G K V+KG +
Sbjct: 16 VLKSVKLSVQFGGFFAIRDFSFTIPEGELHFLVGPNGAGKTTFLDAICG--KAPVSKGSL 73
Query: 61 IFNGE-DITSSSPDERARKGILLAFQVPPEIEGVRILDFLIQVLTEIKGMKPEEAYDVVL 119
+F+G+ +++ ER R GI FQ P + + + L E+ + + + ++
Sbjct: 74 LFHGDLELSKLKEFERVRHGIGRKFQAPSIFPKLTVFENL-----ELSMKQDKRLFPILF 128
Query: 120 NKAKELWFDD-KDMRRFVNVG---------FSGGERKRLELLQALLLEPKLLLLDEPDSG 169
+K K D DM F+ + S G+++ LE+ ++ EPKLLLLDEP +G
Sbjct: 129 SKMKAEERDRMDDMLAFIGLSDERHRIAQTLSHGQKQWLEIGMVMMQEPKLLLLDEPIAG 188
Query: 170 VDVDSLSVISRKIEELHNRGVSIILITHYGRIFGHIDKEKLKVHVMKDGKIVKSG 224
+ + L +R SII++ H G + +V VM +G+++ +G
Sbjct: 189 MTETEEEKTGELLLSLKSR-CSIIVVEH---DMGFVRSYADRVTVMHEGQLLCNG 239
>pir||E70485 ABC transporter - Aquifex aeolicus >gi|2984365|gb|AAC07884.1|
(AE000776) ABC transporter [Aquifex aeolicus]
Length = 251
Score = 84.7 bits (206), Expect = 1e-15
Identities = 73/253 (28%), Positives = 122/253 (47%), Gaps = 21/253 (8%)
Query: 1 MLKIEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGH-PKYKVTKGK 59
+L++++L++ +++L ++ V GE I+G +GSGKS++ TI P Y G
Sbjct: 3 LLEVKNLNLWYREKQVLFDVSFEVKIGEILCIVGESGSGKSSILFTILRLLPPYARVSGS 62
Query: 60 IIFNGEDITSSSPDERAR---KGILLAFQVPPEIEGVRILDFLIQVLTEIKGMK------ 110
+ F G ++ S E K + + FQ P LD L V ++I+
Sbjct: 63 VKFLGRELLKLSEREMKSIRGKEVGMVFQEPS-----LYLDPLFTVGSQIEETYLSHFKA 117
Query: 111 -PEEAYDVVLNKAKELWFDDKDMR-RFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDS 168
EAY+ + K+ + + R SGG ++R+ + A++ EPKL+L DEP +
Sbjct: 118 GRREAYEACIKAMKKAGIPKPEEKYRMYPHQLSGGLKQRVCIANAIVCEPKLVLADEPTT 177
Query: 169 GVDVDSLSVISRKIEELHNRGVSIILITHYGRIFGHIDKEKLKVHVMKDGKIVKSGG-SE 227
+DV I + G ++ILITH FG + + +V V+KDGK+V+ G E
Sbjct: 178 ALDVSVQRRILALFRNMKEEGKAVILITH---DFGVVAEVGDRVIVLKDGKVVEEGDVFE 234
Query: 228 IIDMIEREGFKAI 240
I D + E K +
Sbjct: 235 IFDNPKHEYTKKL 247
>pir||B71234 probable transport protein - Pyrococcus horikoshii
>gi|3256518|dbj|BAA29201.1| (AP000001) 260aa long
hypothetical transport protein [Pyrococcus horikoshii]
Length = 260
Score = 84.7 bits (206), Expect = 1e-15
Identities = 73/236 (30%), Positives = 117/236 (48%), Gaps = 29/236 (12%)
Query: 12 EGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKIIFNGEDITSSS 71
EG+ +L+ I+ + ++G I+GPNGSGK+TL + G K K KG ++ +G + S
Sbjct: 13 EGKTVLKSISFSFSEGTL-AIVGPNGSGKTTLVKMLNGLLKPK--KGNVLIDGINTKEVS 69
Query: 72 PDERARKGILLAFQVPPEIEGVRILDFLIQVLTEIK------GMKPEEAYDVVLNKAKEL 125
E +R + FQ P + F V E+ G+ EE K +
Sbjct: 70 VAELSRI-VGYVFQNPDA------MFFEENVFKEVAFGPKNLGLNEEEV------KKRVR 116
Query: 126 W-FDDKDMRRFVNVG---FSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSVISRK 181
W + +R F N SGGE++RL + L ++PK L+LDEP++G+D L +
Sbjct: 117 WALEAVGLRGFENRNPFELSGGEKQRLAIACILAMKPKYLVLDEPNTGLDERGLQDLINV 176
Query: 182 IEELHNRGVSIILITHYGRIFGHIDKEKLKVHVMKDGKIVKSGGSEIIDMIEREGF 237
I+ L G SIIL+TH + + KV ++KDG++ G ++ ++ EGF
Sbjct: 177 IKNLRREGSSIILVTHDIELVLEVAD---KVLLLKDGELKFFGSTKEFFELDLEGF 229
>pir||G75142 abc transporter, ATP-binding protein PAB2147 - Pyrococcus abyssi
(strain Orsay) >gi|5457732|emb|CAB49222.1| (AJ248284)
ABC transporter, ATP-binding protein [Pyrococcus abyssi]
Length = 579
Score = 84.7 bits (206), Expect = 1e-15
Identities = 70/233 (30%), Positives = 113/233 (48%), Gaps = 27/233 (11%)
Query: 13 GREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKIIFNGEDITSSSP 72
GR +L+G++ V GE +I GP GSGKS++ IA YK TKG+++ +G ++
Sbjct: 351 GRTVLKGVSFKVKPGEKVLITGPPGSGKSSILKLIARF--YKPTKGEVLIDGVNVAKIKT 408
Query: 73 DERARKGILLAFQVPPEIEGVRILDFLIQVLTEIKGMKPEEAYDVVLNKAKELWFDD--- 129
E RK + Q P F + I KP + V AK D
Sbjct: 409 -ENLRKIVAYVPQEP--------FIFNRSIRENIALAKPNATQEEVERAAKIAKIHDFIA 459
Query: 130 ---KDMRRFVN---VGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSVISRKIE 183
K V + SGG+R+R+ L +A+L+ PK++LLD+P S +D ++ + ++
Sbjct: 460 SLPKGYDTVVGEKGITLSGGQRQRIALARAMLMNPKIVLLDDPVSNLDAETEKKLVEDLK 519
Query: 184 ELHNRGVSIILITHYGRIFGHIDKEKLKVHVMKDGKIVKSGGSEIIDMIEREG 236
E+ ++I+ + K +V VMKDGKIV+ G E ++I++ G
Sbjct: 520 EILQDKTALIVSQRLSLV-----KLVDRVIVMKDGKIVEDGKPE--ELIKKGG 565
>pir||G75539 branched-chain amino acid ABC transporter, ATP-binding protein -
Deinococcus radiodurans (strain R1)
>gi|6457955|gb|AAF09865.1|AE001889_11 (AE001889)
branched-chain amino acid ABC transporter, ATP-binding
protein [Deinococcus radiodurans]
Length = 290
Score = 84.7 bits (206), Expect = 1e-15
Identities = 62/212 (29%), Positives = 98/212 (45%), Gaps = 20/212 (9%)
Query: 1 MLKIEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKI 60
+L+++ L + G +R + + G I+GPNG+GKST I+G YK T G+I
Sbjct: 14 LLEVQGLGIRFGGLHAVRDVTAQLQPGRITAIIGPNGAGKSTFFNLISGF--YKPTSGRI 71
Query: 61 IFNGEDITSSSPDERARKGILLAFQVPPEIEGVRILDFLIQVLTEIKGMKPEEAYDVVLN 120
IF GEDIT +GI FQ + + +LD + + D +L
Sbjct: 72 IFRGEDITPLRTHLVVGRGIARTFQTTTIYQELSVLD---NAMIGHRVRTRAGLLDALLR 128
Query: 121 KAKELWFDDKD----MRRFVNVGFSGGE-----------RKRLELLQALLLEPKLLLLDE 165
+E + + MR VG +G +KR+ + AL +P LLLLDE
Sbjct: 129 TGRERHDESESRAGAMRALERVGLAGQAALPAGALNQEGKKRVGIAMALASDPHLLLLDE 188
Query: 166 PDSGVDVDSLSVISRKIEELHNRGVSIILITH 197
P +G++ + + I +L + G+SI L+ H
Sbjct: 189 PAAGMNPEETENLMGLIRQLVSGGLSIALVEH 220
>pir||F82201 spermidine/putrescine ABC transporter, ATP-binding protein VC1428
[imported] - Vibrio cholerae (group O1 strain N16961)
>gi|9655926|gb|AAF94585.1| (AE004221)
spermidine/putrescine ABC transporter, ATP-binding
protein [Vibrio cholerae]
Length = 377
Score = 84.7 bits (206), Expect = 1e-15
Identities = 63/250 (25%), Positives = 128/250 (51%), Gaps = 22/250 (8%)
Query: 1 MLKIEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKI 60
++++ + +G+EI+ +NL VN GEF I+GP+G GK+T+ IAG +G+I
Sbjct: 17 VIRLSGISKSFDGKEIIGNLNLDVNHGEFLTILGPSGCGKTTVLRMIAGFE--TADQGQI 74
Query: 61 IFNGEDITSSSPDERARKGILLAFQVPPEIEGVRILDFLIQVLTEIKGMKPEEAYDVVLN 120
+ + +D+T ++R + ++ + P + + F ++ ++ + E V+
Sbjct: 75 LLDDQDVTQVPAEQRHVNTVFQSYALFPHMTVFENVAFGLR----MQKVPQSEIEPRVME 130
Query: 121 KAKELWFDDKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSVISR 180
+ + + R+ + SGG+++R+ + +A++ +PK+LLLDE S +D +
Sbjct: 131 ALRMVRLAEMAQRKPHQL--SGGQQQRIAIARAVVNKPKVLLLDESLSALDYKLRKQMQS 188
Query: 181 KIEELHNR-GVSIILITHYGRIFGHIDKEKL-----KVHVMKDGKIVKSGGSEIIDMIER 234
++++L + G++ I +TH D+E+ ++ VM+ GKI + G I +
Sbjct: 189 ELKQLQRQLGITFIFVTH--------DQEEALSMSDRIIVMRSGKIEQDGSPREIYEDPK 240
Query: 235 EGFKAIFGGE 244
F A F GE
Sbjct: 241 NLFVARFIGE 250
>emb|CAC05961.1| (AL391763) ATP-binding protein [Streptomyces coelicolor]
Length = 253
Score = 84.7 bits (206), Expect = 1e-15
Identities = 61/235 (25%), Positives = 118/235 (49%), Gaps = 18/235 (7%)
Query: 1 MLKIEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKI 60
M+K E +H E+L+GI+L V GE ++GP+GSGKST L H + K+ G++
Sbjct: 4 MVKAEGVHKSFGAVEVLKGIDLEVKQGEVFCLIGPSGSGKSTF-LRCINHLE-KINAGRL 61
Query: 61 IFNGEDITSSSPDERA-----------RKGILLAFQVPPEIEGVRILDFLIQVLTEIKGM 109
+GE + ++ R+ I + FQ + ++ +++ ++KGM
Sbjct: 62 YVDGELVGYRQKGDKLYELKDSEVALKRRDIGMVFQRFNLFPHMTAVENVMEAPVQVKGM 121
Query: 110 KPEEAYDVVLNKAKELWFDDKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSG 169
+A + + + DK + SGG+++R+ + +AL ++PKL+L DEP S
Sbjct: 122 SRAQARERARGLLERVGLADKAGNYPSQL--SGGQQQRVAIARALAMDPKLMLFDEPTSA 179
Query: 170 VDVDSLSVISRKIEELHNRGVSIILITHYGRIFGHIDKEKLKVHVMKDGKIVKSG 224
+D + + + + +L G++++++TH G + + M +G +V+SG
Sbjct: 180 LDPELVGDVLDVMRDLAESGMTMVVVTHE---MGFAREVGDSLVFMDNGVVVESG 231
>sp|P55453|Y4FO_RHISN PUTATIVE ABC TRANSPORTER ATP-BINDING PROTEIN Y4FO
>gi|2182398|gb|AAB91671.1| (AE000073) Y4fO [Rhizobium
sp. NGR234]
Length = 339
Score = 84.3 bits (205), Expect = 1e-15
Identities = 56/198 (28%), Positives = 104/198 (52%), Gaps = 9/198 (4%)
Query: 1 MLKIEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKI 60
+L + L V G ++R +NL V DG F ++GP+GSGKS++ TIAG G++
Sbjct: 12 VLSLNKLDVGFPGMTVVRDLNLDVADGAFVSLLGPSGSGKSSVLRTIAG--LLPALGGRV 69
Query: 61 IFNGEDITSSSPDERARKGILLAFQVPPEIEGVRILDFLIQVLTEIKGMKPEEAYDVVLN 120
+ G+DIT+ P+ R + + + P + + F ++V + K +V
Sbjct: 70 LLEGQDITALPPERRNVGIVFQNYALFPTMSAFENIAFALRVAKKSKAEVERRVGEV--- 126
Query: 121 KAKELWFDDKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSVISR 180
A+ D+ ++ N+ SGG+++R+ + +AL+ ++LL DEP S +D + + +
Sbjct: 127 -AEMAGISDQLDKKPANM--SGGQQQRVAIARALVTGSRVLLFDEPLSNLDAKVRAAMRK 183
Query: 181 KIEELHNR-GVSIILITH 197
+I+ L + G + I +TH
Sbjct: 184 EIKRLQSELGFTAIFVTH 201
>gi|10955092 moaD [Agrobacterium tumefaciens] >gi|11278927|pir||T45539 moaD
protein [imported] - Agrobacterium tumefaciens plasmid
pTi15955 >gi|2665715|gb|AAB88475.1| (AF242881) moaD
[Agrobacterium tumefaciens]
Length = 588
Score = 84.3 bits (205), Expect = 1e-15
Identities = 70/234 (29%), Positives = 121/234 (50%), Gaps = 14/234 (5%)
Query: 1 MLKIEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTK--G 58
+L +++L+V +++++ ++ + G ++G +GSGKS +L I G V K G
Sbjct: 6 VLSVKNLNVAFGKKQVVQDLSFDIAPGSTLAVVGESGSGKSVTSLAIMGLLPVGVAKASG 65
Query: 59 KIIFNGEDITSSSPDERA--RKG-ILLAFQVP-PEIEGVRILDFLIQVLTEI-KGMKPEE 113
I NG ++ S S E R G I + FQ P + V+ + F I I +G++ +E
Sbjct: 66 SIQLNGRELLSLSESEMCGIRGGKISMIFQEPMTSLNPVQKVGFQIGEAIRIHRGLRGKE 125
Query: 114 AYDVVLNKAKELWFDDKDMRRFVNVG--FSGGERKRLELLQALLLEPKLLLLDEPDSGVD 171
+ VL K++ D + RR N FSGG R+R+ + AL P L++ DEP + +D
Sbjct: 126 LRNAVLEMLKKVGIPDAE-RRIDNYPHTFSGGMRQRVMIAMALACNPALIIADEPTTALD 184
Query: 172 VDSLSVISRKIEELHNR-GVSIILITHYGRIFGHIDKEKLKVHVMKDGKIVKSG 224
V + I +++L V+++ ITH + I +V VM+ G++V+SG
Sbjct: 185 VTVQAQILELLKQLQRETNVALLFITHDMGVVAEIAD---RVLVMRGGQVVESG 235
>pir||B82393 ABC transporter, ATP-binding protein VCA0977 [imported] - Vibrio
cholerae (group O1 strain N16961)
>gi|9658417|gb|AAF96873.1| (AE004424) ABC transporter,
ATP-binding protein [Vibrio cholerae]
Length = 539
Score = 84.3 bits (205), Expect = 1e-15
Identities = 73/250 (29%), Positives = 126/250 (50%), Gaps = 32/250 (12%)
Query: 1 MLKIEDLHVEVEGR-----------EILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAG 49
+LK ED+ V+ + E ++GI+L + GE I+G +GSGKSTL + G
Sbjct: 276 LLKAEDIRVKFLVKPYFISRRNQYFEAVKGISLELKQGETLGIVGESGSGKSTLGRALIG 335
Query: 50 HPKYKVTKGKIIFNGEDITSSSPDERA--RKGILLAFQVPPEIEGVRILDFLIQVLTEIK 107
+ G+I F G+D + S +R +K I + FQ P R+ + +++TE
Sbjct: 336 ---LLPSTGQIAFKGQDFRALSEKQRLALKKDIQMVFQDPYGSLSPRMT--VGEIITE-- 388
Query: 108 GMKPEEAYDVVLNKAK-------ELWFDDKDMRRFVNVGFSGGERKRLELLQALLLEPKL 160
G+ + + L + + E+ D + R+ + FSGG+R+R+ + +AL+LEP
Sbjct: 389 GLLVHQPHISKLERMQRARRALEEVRLDPNSINRYPHE-FSGGQRQRIAIARALILEPSF 447
Query: 161 LLLDEPDSGVDVD-SLSVISRKIEELHNRGVSIILITHYGRIFGHIDKEKLKVHVMKDGK 219
+LLDEP S +D L+VI E R + + I+H + + +V VM+ G+
Sbjct: 448 ILLDEPTSALDRSVQLTVIELLKEIQKRRNIGYLFISHDLAVVKALSD---RVLVMQKGQ 504
Query: 220 IVKSGGSEII 229
+++ G +E I
Sbjct: 505 VMEQGSAESI 514
>sp|P44531|AFUC_HAEIN PUTATIVE FERRIC TRANSPORT ATP-BINDING PROTEIN AFUC
>gi|1074273|pir||D64143 probable ABC-type transport
protein HI0126 - Haemophilus influenzae (strain Rd KW20)
>gi|1573081|gb|AAC21800.1| (U32698) ferric ABC
transporter, ATP-binding protein (afuC) [Haemophilus
influenzae Rd]
Length = 328
Score = 83.9 bits (204), Expect = 2e-15
Identities = 76/236 (32%), Positives = 123/236 (51%), Gaps = 22/236 (9%)
Query: 16 ILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKIIFNGEDITSSSPDER 75
++ ++L + G ++GP+G GK+T+ +AG T G+I +GED+T SS R
Sbjct: 21 VIDNLDLTIKRGTMVTLLGPSGCGKTTVLRLVAGLEN--PTSGQIFIDGEDVTKSSIQNR 78
Query: 76 ARKGILLAFQVPPEIEGVRILDFLIQVLTEIKGMKPEEAYDVVLNKAKEL----WFDDKD 131
I + FQ + I D + L +++G+ EE V +A EL F+D
Sbjct: 79 ---DICIVFQSYALFPHMSIGDNVGYGL-KMQGIGKEERAQRV-KEALELVDLAGFED-- 131
Query: 132 MRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSVISRKIEELHNR-GV 190
RFV+ SGG+++R+ L +AL+L+PK+LL DEP S +D + + KI EL R G+
Sbjct: 132 --RFVDQ-ISGGQQQRVALARALVLKPKVLLFDEPLSNLDANLRRSMREKIRELQQRLGI 188
Query: 191 SIILITH-YGRIFGHIDKEKLKVHVMKDGKIVKSGGSEIIDMIEREGFKAIFGGEN 245
+ + +TH F D +V VM GKI++ ++ + + F A F GE+
Sbjct: 189 TSLYVTHDQTEAFAVSD----EVIVMNKGKIMQKAPAKELYLRPNSLFLANFMGES 240
>pir||C71237 probable transport-ATP binding protein - Pyrococcus horikoshii
>gi|3256543|dbj|BAA29226.1| (AP000001) 345aa long
hypothetical transport-ATP binding protein [Pyrococcus
horikoshii]
Length = 345
Score = 83.9 bits (204), Expect = 2e-15
Identities = 73/249 (29%), Positives = 128/249 (51%), Gaps = 16/249 (6%)
Query: 1 MLKIEDLHVEVEGREI-LRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGK 59
MLK+E + + RE LR I+ V +GE +I+GP+GSGK+ L IAG +G+
Sbjct: 1 MLKVESISKDY--REFKLREISFDVREGEHFIILGPSGSGKTVLLEIIAGI--ISPDRGR 56
Query: 60 IIFNGEDITSSSPDERARKGILLAFQVPPEIEGVRILDFLIQVLTEIKGMKPEEAYDVVL 119
I+ GEDIT P++R I + + P + + F ++ ++ + +E V
Sbjct: 57 ILLRGEDITGLPPEKRNFSYIPQNYALFPHMTVFDNIAFGLK----LRKIPRKEVARKVR 112
Query: 120 NKAKELWFDDKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSVIS 179
A+ L D R+ + SGGE++R+ + +AL+++P+LLL+DEP + +DV + S +
Sbjct: 113 EVAESLGIDHLLHRKPRTL--SGGEQQRVAIARALVVKPELLLMDEPFANLDVQTKSKLI 170
Query: 180 RKIEELHNR-GVSIILITHYGRIFGHIDKEKLKVHVMKDGKIVKSGG-SEIIDMIEREGF 237
R+++ G + I +TH F +V +M G++V+ G ++ + E
Sbjct: 171 REMKRWRKEFGFTAIHVTH---SFEEALSLGDRVGIMLRGRLVQVGDVRDVFSKPKSEEV 227
Query: 238 KAIFGGENV 246
G EN+
Sbjct: 228 ARFLGFENI 236
>dbj|BAB04537.1| (AP001509) bacitracin ABC transporter (ATP-binding protein)
[Bacillus halodurans]
Length = 314
Score = 83.9 bits (204), Expect = 2e-15
Identities = 68/243 (27%), Positives = 124/243 (50%), Gaps = 22/243 (9%)
Query: 12 EGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKIIFNGEDITSSS 71
+G+EI+ +NL VN GE + +GPNG+GK+T+ + K + G+I G+ +TS S
Sbjct: 15 QGKEIISNLNLHVNKGEIYGFLGPNGAGKTTVMKMLMNF--VKPSAGEIELFGQRLTSQS 72
Query: 72 PDERARKGILLAFQVPPEIEGVRILDFLIQVLTEIKGMKPEEAYDVVLNKAKELWFDDKD 131
+ R G ++ F + E R +++ E G A + L K K
Sbjct: 73 YEMLKRIGSMIEFPIFYEKLSAR---ENLELHCEYMGYYKPSAIEEALEMVKLQLTGSKA 129
Query: 132 MRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSVISRKIEELHNR-GV 190
++ FS G ++RL + +A+ +P+LL+LDEP +G+D + I + + L N GV
Sbjct: 130 VK-----DFSLGMKQRLGIARAICTKPELLILDEPINGLDPVGIKEIRQLFQTLCNEYGV 184
Query: 191 SIILITHYGRIFGHIDKEKLKVHVMKDGKIV--------KSGGSEIIDMIEREGFKAIFG 242
+I++ +H I I++ V V+++G +V +S +E I+++ + KA++
Sbjct: 185 TILISSH---ILSEIEQIADTVGVIRNGMLVAEVALDDIRSQQTEYIELLTYDARKALYV 241
Query: 243 GEN 245
+N
Sbjct: 242 LDN 244
>gi|11499564 ABC transporter, ATP-binding protein [Archaeoglobus fulgidus]
>gi|7445711|pir||E69497 ABC transporter, ATP-binding
protein homolog - Archaeoglobus fulgidus
>gi|2648557|gb|AAB89272.1| (AE000966) ABC transporter,
ATP-binding protein [Archaeoglobus fulgidus]
Length = 253
Score = 83.1 bits (202), Expect = 3e-15
Identities = 71/253 (28%), Positives = 118/253 (46%), Gaps = 28/253 (11%)
Query: 1 MLKIEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKI 60
+++ D+ E+L +NL + GEF ++GPNG+GKST+ I G K TKG +
Sbjct: 3 VIEFYDVSFSYNSSEVLSDLNLGIGRGEFVAVLGPNGAGKSTMLRLILG--LLKPTKGTV 60
Query: 61 IFNGEDITSSSPDERARKGIL-----LAFQVPPEIEGVRILDFLIQVLTEIKGMKPEEAY 115
G + R G L + + P + V L L + ++ K EA
Sbjct: 61 KVLGYNAFDERDKFVGRVGYLPQREEILLEAPLTVSQVIKLPLLARG-KKVGDSKLREAL 119
Query: 116 DVVLNKAKELWFDDKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSL 175
+V F DK SGG+++++ L +AL+ +P++LLLDEP +GVDV S
Sbjct: 120 SMVGLDG----FGDKLFSEL-----SGGQQQKVLLARALISDPEILLLDEPFNGVDVPSQ 170
Query: 176 SVISRKIEELHNRGVSIILITH-YGRIFGHIDKEKL----------KVHVMKDGKIVKSG 224
I + E+ ++G +++ + H + +ID+ L V + I+K+
Sbjct: 171 EKIVEVLAEMSSKGKTVVAVVHNINPLLHNIDRVVLLNRRIIAAGKPNEVFSEENIIKAY 230
Query: 225 GSEIIDMIEREGF 237
G+ I +I EGF
Sbjct: 231 GTSIPIVICEEGF 243
>pir||T35757 probable branched chain amino acid transport ATP-binding protein -
Streptomyces coelicolor >gi|5689905|emb|CAB52068.1|
(AL109732) putative branched chain amino acid transport
ATP-binding protein [Streptomyces coelicolor A3(2)]
Length = 238
Score = 83.1 bits (202), Expect = 3e-15
Identities = 68/245 (27%), Positives = 123/245 (49%), Gaps = 10/245 (4%)
Query: 1 MLKIEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKI 60
+L++EDL V E ++GI+ V+ GE ++G NG+GK+T T++G K G+I
Sbjct: 4 LLEVEDLRVAYGKIEAVKGISFKVDAGEVVTLIGTNGAGKTTTLRTLSG--LLKPVGGQI 61
Query: 61 IFNGEDITSSSPDERARKGILLAFQVPPEIEGVRILDFLIQVLTEIKGMKPEEAYDVVLN 120
F G+ + + G+ + + + I D L ++ ++ +P D+
Sbjct: 62 RFGGKSLKKVPAHQIVSLGLAHSPEGRHIFPRMTIEDNL-RLGAFLRSDRPGIEKDI--Q 118
Query: 121 KAKELWFDDKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSVISR 180
+A +L+ + R+ SGGE++ L + +AL+ +PKLL+LDEP G+ + I
Sbjct: 119 RAYDLFPILGERRKQAAGTLSGGEQQMLAMGRALMSQPKLLMLDEPSMGLSPIMMQKIMA 178
Query: 181 KIEELHNRGVSIILITHYGRIFGHIDKEKLKVHVMKDGKIVKSGGSEIIDMIEREGFKAI 240
I EL ++G +I+L+ + + HVM+ G IV SG + D++ E +
Sbjct: 179 TIAELKSQGTTILLVEQNAQAALSLADHG---HVMEVGNIVLSGSGQ--DLLHDESVRKA 233
Query: 241 FGGEN 245
+ GE+
Sbjct: 234 YLGED 238
>pir||H83240 probable ATP-binding component of ABC transporter PA3254 [imported]
- Pseudomonas aeruginosa (strain PAO1)
>gi|9949377|gb|AAG06642.1|AE004747_15 (AE004747)
probable ATP-binding component of ABC transporter
[Pseudomonas aeruginosa]
Length = 331
Score = 82.7 bits (201), Expect = 4e-15
Identities = 71/252 (28%), Positives = 124/252 (49%), Gaps = 30/252 (11%)
Query: 2 LKIEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKII 61
+ +E L I R I+ A GEF ++GP+G GKSTL IAG + V G+I+
Sbjct: 4 VSVEQLDKSYGATSIFRDIDFAAARGEFVTLLGPSGCGKSTLLRCIAGLTE--VDSGRIL 61
Query: 62 FNGEDITSSSPDERARKGILLAFQVPPEIEGVRILDFLIQV----LTEIKGMKPEEAYDV 117
+GED+ P +R + ++ + P + + + F +++ E+K + EA ++
Sbjct: 62 IDGEDVVPLPPQKRGIAMVFQSYALFPNMTVQQNVAFGLRMQKVPAAELK-QRVAEAIEL 120
Query: 118 VLNKAKELWFDDKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSV 177
V EL + R+ + SGG+ +R+ L ++L+ P+LLLLDEP S +D
Sbjct: 121 V-----EL---GEYAARYPHQ-LSGGQCQRVALARSLVTRPRLLLLDEPLSALDARIRKH 171
Query: 178 ISRKIEELHNR-GVSIILITHYGRIFGHIDKEKL-----KVHVMKDGKIVKSGGSEIIDM 231
+ +I + G++ + +TH D+E+ ++ +M G+IV+SG +E +
Sbjct: 172 LREQIRRIQQELGLTTVFVTH--------DQEEALTLSDRIVLMNAGRIVQSGDAETLYT 223
Query: 232 IEREGFKAIFGG 243
F A F G
Sbjct: 224 APENAFAAGFIG 235
>sp|P45171|POTA_HAEIN SPERMIDINE/PUTRESCINE TRANSPORT ATP-BINDING PROTEIN POTA
>gi|1075318|pir||B64118 spermidine/putrescine transport
protein potA - Haemophilus influenzae (strain Rd KW20)
>gi|1574806|gb|AAC22991.1| (U32813)
spermidine/putrescine ABC transporter, ATP-binding
protein (potA) [Haemophilus influenzae Rd]
Length = 381
Score = 82.3 bits (200), Expect = 5e-15
Identities = 63/250 (25%), Positives = 127/250 (50%), Gaps = 22/250 (8%)
Query: 1 MLKIEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKI 60
++++ + I+ NL +N+GEF I+GP+G GK+T+ +AG ++ G I
Sbjct: 19 IIELRSIKKSYGSNTIINDFNLTINNGEFVTILGPSGCGKTTVLRLLAG--LEELDSGSI 76
Query: 61 IFNGEDITSSSPDERARKGILLAFQVPPEIEGVRILDFLIQVLTEIKGMKPEEAYDVVLN 120
I +GEDIT+ ++R + ++ + P + + F ++ ++ + EE VL
Sbjct: 77 ILDGEDITNVPAEKRHINTVFQSYALFPHMTIFENVAFGLR----MQKVPNEEIKPRVLE 132
Query: 121 KAKELWFDDKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSVISR 180
+ + ++ R+ + SGG+++R+ + +A++ +PK+LLLDE S +D + +
Sbjct: 133 ALRMVQLEEMADRKPTQL--SGGQQQRIAIARAVVNKPKVLLLDESLSALDYKLRKQMQQ 190
Query: 181 KIEELHNR-GVSIILITHYGRIFGHIDKEKL-----KVHVMKDGKIVKSGGSEIIDMIER 234
+++ L + G++ I +TH D+E+ ++ +++ GKI + G I
Sbjct: 191 ELKMLQRQLGITFIFVTH--------DQEEAITMSDRIVLLRKGKIAQDGSPREIYEDPA 242
Query: 235 EGFKAIFGGE 244
F A F GE
Sbjct: 243 NLFVARFIGE 252
>pir||C64609 ABC transporter, ATP-binding protein - Helicobacter pylori (strain
26695) >gi|2313839|gb|AAD07765.1| (AE000584) ABC
transporter, ATP-binding protein [Helicobacter pylori
26695]
Length = 240
Score = 82.3 bits (200), Expect = 5e-15
Identities = 68/251 (27%), Positives = 123/251 (48%), Gaps = 22/251 (8%)
Query: 1 MLKIEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKI 60
+LK E L+ +++ +I+ ++L V GE ++GPNG+GK+T I G + + G +
Sbjct: 3 ILKAEHLNKQIKKTKIVSDVSLEVKSGEVVGLLGPNGAGKTTTFYMICG--LLEPSGGSV 60
Query: 61 IFNGEDITSSSPDERARKGILLAFQVPPEIEGVRILDFLIQV--LTEIKGMKPEEAYDVV 118
N ++ +R+ GI Q + + + + L T + EE + +
Sbjct: 61 YLNDVNLAKYPLHKRSNLGIGYLPQESSIFKELSVEENLALAGESTFKNSKESEEKMESL 120
Query: 119 LNKAKELWFDDKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSVI 178
L+ F+ + +R + SGGER+R+E+ +AL+ PK +LLDEP +GVD ++ I
Sbjct: 121 LDA-----FNIQAIRERKGMSLSGGERRRVEIARALMKNPKFVLLDEPFAGVDPIAVIDI 175
Query: 179 SRKIEELHNRGVSIILITHYGRIFGHIDKEKLKV----HVMKDGKIVKSGGSEIIDMIER 234
+ IE L + +++ H R E L V +V+K G ++ SG + ++ E
Sbjct: 176 QKIIESLIGLNIGVLITDHNVR-------ETLSVCHRAYVIKSGTLLASGNAN--EIYEN 226
Query: 235 EGFKAIFGGEN 245
+ + GEN
Sbjct: 227 ALVRKYYLGEN 237
>pir||D75187 probable maltose/maltodextrin transport ATP-binding PAB2336 -
Pyrococcus abyssi (strain Orsay)
>gi|5457456|emb|CAB48947.1| (AJ248283) hypothetical
MALTOSE/MALTODEXTRIN TRANSPORT ATP-BINDING [Pyrococcus
abyssi]
Length = 364
Score = 82.3 bits (200), Expect = 5e-15
Identities = 65/245 (26%), Positives = 124/245 (50%), Gaps = 16/245 (6%)
Query: 2 LKIEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKII 61
+++E+L + + +NL + DGEF V++GP+G GK+T IAG + T+GKI
Sbjct: 4 VRLENLTKKFGNFTAVNKLNLTIKDGEFLVLLGPSGCGKTTTLRMIAG--LEEPTEGKIY 61
Query: 62 FNGEDITSSSPDERARKGILLAFQVPPEIEGVRILDFLIQVLTEIKGMKPEEAYDVVLNK 121
F ++T P ER + ++ V P + + F +++ P + D +
Sbjct: 62 FGDREVTYLPPRERNISMVFQSYAVWPHMTVYDNIAFPLKI-----KKFPRDEIDKRVRW 116
Query: 122 AKELWFDDKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSVISRK 181
A EL ++ + R+ SGG+R+R+ + +A+++EP +LL+DEP S +D + +
Sbjct: 117 AAELLQIEELLDRY-PAQLSGGQRQRVAVARAIVVEPDVLLMDEPLSNLDAKLRVAMRAE 175
Query: 182 IEELHNR-GVSIILITHYGRIFGHIDKEKL--KVHVMKDGKIVKSGGSEIIDMIEREGFK 238
I++L + V+ I +TH ++ + ++ VM G++++ G + + F
Sbjct: 176 IKKLQQKLKVTTIYVTH-----DQVEAMTMGDRIAVMNRGQLLQVGPPTEVYLKPNSVFV 230
Query: 239 AIFGG 243
A F G
Sbjct: 231 ATFIG 235
>pir||B83571 probable ATP-binding component of ABC transporter PA0603 [imported]
- Pseudomonas aeruginosa (strain PAO1)
>gi|9946476|gb|AAG03992.1|AE004496_8 (AE004496) probable
ATP-binding component of ABC transporter [Pseudomonas
aeruginosa]
Length = 369
Score = 82.3 bits (200), Expect = 5e-15
Identities = 67/232 (28%), Positives = 112/232 (47%), Gaps = 14/232 (6%)
Query: 16 ILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKIIFNGEDITSSSPDER 75
I++ +NL + GEF ++GP+GSGK+T + +AG T G+I+ G I + P +R
Sbjct: 26 IVKDLNLDIRKGEFLTLLGPSGSGKTTSLMMLAGFET--PTAGEILLAGRSINNVPPHKR 83
Query: 76 ARKGILLAFQVPPEIEGVRILDFLIQVLTEIKGMKPEEAYDVVLNKAKELWFDDKDMRRF 135
+ + + P + L F + V +GM + + V + D R
Sbjct: 84 DIGMVFQNYALFPHMTVAENLAFPLSV----RGMSKTDVKERVKRALSMVQLDAFAGRYP 139
Query: 136 VNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSVISRKIEELHNR-GVSIIL 194
+ SGG+++R+ L +AL+ EP+L+L+DEP +D + +I+ LH R GV+++
Sbjct: 140 AQL--SGGQQQRVALARALVFEPQLVLMDEPLGALDKQLREHMQMEIKHLHQRLGVTVVY 197
Query: 195 ITH-YGRIFGHIDKEKLKVHVMKDGKIVKSGGSEIIDMIEREGFKAIFGGEN 245
+TH G D +V V G+I + + R F A F GEN
Sbjct: 198 VTHDQGEALTMSD----RVAVFHQGEIQQIEPPRNLYEQPRNTFVANFIGEN 245
>pir||G71131 probable ATP-binding protein - Pyrococcus horikoshii
>gi|3257230|dbj|BAA29913.1| (AP000003) 312aa long
hypothetical ATP-binding protein [Pyrococcus horikoshii]
Length = 312
Score = 81.9 bits (199), Expect = 7e-15
Identities = 64/222 (28%), Positives = 112/222 (49%), Gaps = 14/222 (6%)
Query: 17 LRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKIIFNGEDITSSSPDERA 76
+RG+ +VN+GE +GPNG+GK+T + G K T G++ G D+T +A
Sbjct: 23 VRGVTFSVNEGEVFGFLGPNGAGKTTTIRMLTG--VLKPTSGQVRVLGYDMTREPEKLKA 80
Query: 77 RKGI-LLAFQVPPEIEGVRILDFLIQVLTEIKGMKPEEAY--DVVLNKAKELWFDDKDMR 133
R+ + ++ P I+ + + ++++ E+ G+ E + L K EL+ + R
Sbjct: 81 RQRMGIVPEMANPYIDLTAMQN--LKLMGELYGLPKWEIEKRSIELLKLFELY----EKR 134
Query: 134 RFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSVISRKIEELHNRGVSII 193
GFS G R+RL L A++ +P+L LDEP SG+DV S +I I + G +I
Sbjct: 135 NIKVRGFSKGMRQRLVLAMAMIADPELYFLDEPTSGLDVISARIIKDIIRDEKKAGKTIF 194
Query: 194 LITHYGRIFGHIDKEKLKVHVMKDGKIVKSGGSEIIDMIERE 235
L TH + + ++ +++ GK+V E + + +E
Sbjct: 195 LTTHNMNDANELCE---RIGIIRKGKLVAIDTPEGLKRLTKE 233
>pir||G81344 ABC transport system ATP-binding protein Cj0732 [imported] -
Campylobacter jejuni (strain NCTC 11168)
>gi|6968189|emb|CAB73006.1| (AL139076) ABC transport
system ATP-binding protein [Campylobacter jejuni]
Length = 329
Score = 81.9 bits (199), Expect = 7e-15
Identities = 67/248 (27%), Positives = 121/248 (48%), Gaps = 22/248 (8%)
Query: 2 LKIEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKII 61
LKI++ + I IN + GEF ++GP+G GKSTL IAG ++ GKI
Sbjct: 4 LKIKNFKKAYGDKIIFEDINFSAKKGEFITLLGPSGCGKSTLLRCIAG--LSQINGGKIS 61
Query: 62 FNGEDITSSSPDERARKGILLAFQVPPEIEGVRILDFLIQVLTEIKGMKPEEAYDVVLNK 121
N +D+T SP +R + + + P + + F + +IK M ++ V
Sbjct: 62 LNDKDLTKLSPQKRNIGMVFQNYALFPNLNVFENVAFGL----KIKKMDKKDIEKRVKKM 117
Query: 122 AKELWFDDKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSVISRK 181
K + + ++ + SGG+ +R+ L ++L+++P LLLLDEP S +D + +
Sbjct: 118 LKLV--ELEEYAKTYPHKLSGGQMQRVALARSLVIKPDLLLLDEPLSALDAKIRKYLRVQ 175
Query: 182 IEELHNR-GVSIILITHYGRIFGHIDKEKL-----KVHVMKDGKIVKSGGSEIIDMIERE 235
I+E+ ++ I +TH D+E+ + +M +GKI+++ + + ++
Sbjct: 176 IKEIQKELELTTIFVTH--------DQEEALELSDTIILMNEGKIIQNSNANNLYLLPES 227
Query: 236 GFKAIFGG 243
F A F G
Sbjct: 228 HFVASFIG 235
>pir||G71192 probable cobalt transport ATP-binding protein - Pyrococcus
horikoshii >gi|3258251|dbj|BAA30934.1| (AP000007) 284aa
long hypothetical cobalt transport ATP-binding protein
[Pyrococcus horikoshii]
Length = 284
Score = 81.5 bits (198), Expect = 9e-15
Identities = 77/252 (30%), Positives = 125/252 (49%), Gaps = 22/252 (8%)
Query: 1 MLKIEDLHVEV-EGREI-LRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVT-- 56
++++ED+ RE LR INL + GEF I+GP+GSGKST LT+ G + +
Sbjct: 3 VIEVEDVSFRYGNSREYSLRHINLEIRKGEFLGIIGPSGSGKSTFCLTLNGLIPHSIAGE 62
Query: 57 -KGKIIFNGEDITSSSPDERARKGILLAFQVP-PEIEGVRILDFLIQVLTEIKGMKPEEA 114
G +I +G + S E + K + L FQ P ++ + +L+ + L + G++ +E
Sbjct: 63 FHGNVIVDGLNTREHSVSELSTK-VGLVFQNPDSQLFNMTVLEEVAFALENL-GIERDEM 120
Query: 115 YDVV--LNKAKELWFDDKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDV 172
+ + K LW D R SGGE++RL + L+++PK+L+LDEP S +D
Sbjct: 121 WRRIRWALKLVRLW----DKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDP 176
Query: 173 DSLSVISRKIEELH-NRGVSIILITH-YGRIFGHIDKEKLKVHVMKDGKIVKSGGSEIID 230
+ I+ L+ ++IIL+ H + H D ++ V G+IV G E D
Sbjct: 177 LGREEVLGLIKLLNKEEKITIILVEHNTDFLLEHAD----RIVVFDKGRIVLEGKPE--D 230
Query: 231 MIEREGFKAIFG 242
+ E F G
Sbjct: 231 VFENVEFLRTIG 242
>emb|CAC16446.1| (AL450165) putative oligopeptide ABC transporter ATP-binding
protein [Streptomyces coelicolor]
Length = 288
Score = 81.5 bits (198), Expect = 9e-15
Identities = 71/243 (29%), Positives = 117/243 (47%), Gaps = 23/243 (9%)
Query: 6 DLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAG---HPKYKVTKGKIIF 62
D H+ +R ++L V GE ++G +GSGKS AL++ P G+I F
Sbjct: 36 DFHLAGSVVHAVRDVSLHVRAGETLAVVGESGSGKSATALSVLRLNPSPPCVYASGEIRF 95
Query: 63 NGEDITSSSPDERAR---KGILLAFQVPPEIEGV--RILDFLIQVLTEIKGMKPEEAYDV 117
+G D+ S E R + I + FQ P R+ + +VL GM EA
Sbjct: 96 DGRDLLRLSEKELGRVRGRDIAMVFQDPMTCLDPLQRVGAQVAEVLRHHTGMSRAEAAKA 155
Query: 118 VLNKAKELWFDDKDMR-RFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLS 176
L E+ D +R R SGG R+R+ + AL+ P++L+ DEP + +DV
Sbjct: 156 ALAALDEVGIPDPALRYRQYPHELSGGLRQRVMIATALVARPRVLIADEPTTALDV---- 211
Query: 177 VISRKIEEL-----HNRGVSIILITHYGRIFGHIDKEKLKVHVMKDGKIVKSGGSEIIDM 231
+ R+I +L H + ++LITH + + + +V VM GK+V++G +++D+
Sbjct: 212 TVQRQILDLLVTLQHKHDMGVVLITHDLAV---VAETADRVVVMHRGKVVETG--DVLDV 266
Query: 232 IER 234
+R
Sbjct: 267 FDR 269
>pir||A72261 spermidine/putrescine ABC transporter, ATP-binding protein -
Thermotoga maritima (strain MSB8)
>gi|4981937|gb|AAD36446.1|AE001791_8 (AE001791)
spermidine/putrescine ABC transporter, ATP-binding
protein [Thermotoga maritima]
Length = 368
Score = 81.1 bits (197), Expect = 1e-14
Identities = 65/232 (28%), Positives = 118/232 (50%), Gaps = 14/232 (6%)
Query: 15 EILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKIIFNGEDITSSSPDE 74
++L+ ++L + GEF I+GP+G GK+TL IAG V G ++ +G+ I + P++
Sbjct: 19 QVLKNVSLDIKKGEFFSILGPSGCGKTTLLRVIAGFEG--VESGDVLLDGKSILNLPPNK 76
Query: 75 RARKGILLAFQVPPEIEGVRILDFLIQVLTEIKGMKPEEAYDVVLNKAKELWFDDKDMRR 134
R I + + P + + F ++ +K + E V N+ L ++ ++
Sbjct: 77 RPVNIIFQNYALFPHLTVFENIAFPLK----LKKLSENEINQRV-NELLSLIRMEEHAQK 131
Query: 135 FVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSVISRKIEELHNR-GVSII 193
+ SGG+++R+ + +AL EP++LLLDEP S +D + +++ LH+R G++ I
Sbjct: 132 MPSQ-LSGGQKQRVAIARALANEPRVLLLDEPLSALDAKLRQELLVELDNLHDRVGITFI 190
Query: 194 LITH-YGRIFGHIDKEKLKVHVMKDGKIVKSGGSEIIDMIEREGFKAIFGGE 244
+TH D +V +M +G+IV+ G + F A F GE
Sbjct: 191 YVTHDQAEAISVSD----RVALMNEGEIVQVGTPYEVYESPVNVFAATFIGE 238
>pir||A82429 iron(III) ABC transporter, ATP-binding protein VCA0687 [imported] -
Vibrio cholerae (group O1 strain N16961)
>gi|9658105|gb|AAF96587.1| (AE004398) iron(III) ABC
transporter, ATP-binding protein [Vibrio cholerae]
Length = 351
Score = 81.1 bits (197), Expect = 1e-14
Identities = 67/235 (28%), Positives = 116/235 (48%), Gaps = 22/235 (9%)
Query: 16 ILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKIIFNGEDITSSSPDER 75
++ ++L + G ++GP+G GK+T+ +AG K T G+I +GED+T S +R
Sbjct: 21 VIGNLDLEIKKGSLVTLLGPSGCGKTTVLRLVAGLEK--PTSGQIFIDGEDVTERSIQQR 78
Query: 76 ARKGILLAFQVPPEI---EGVRILDFLIQVLTEIKGMKPEEAYDVV-LNKAKELWFDDKD 131
+ ++ + P + E V ++++ +E + +EA +V L E + D
Sbjct: 79 DICMVFQSYALFPHMSLYENVAYGLKMLKLPSEEVRQRVDEALKIVDLEGMGERYVDQ-- 136
Query: 132 MRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSVISRKIEELHNR-GV 190
SGG+++R+ L +AL+L+PK+LL DEP S +D + + I EL R +
Sbjct: 137 --------ISGGQQQRVALARALVLKPKVLLFDEPLSNLDANLRRSMRETIRELQQRFDI 188
Query: 191 SIILITH-YGRIFGHIDKEKLKVHVMKDGKIVKSGGSEIIDMIEREGFKAIFGGE 244
+ + +TH F D V VMK G I++ G + + + F A F GE
Sbjct: 189 TSLYVTHDQAEAFAVSD----TVIVMKQGDIMQIGTPQELYKAPKSMFMANFMGE 239
>pir||T36344 probable ABC-type transport system ATP-binding protein -
Streptomyces coelicolor >gi|4808357|emb|CAB42771.1|
(AL049841) putative ABC transporter ATP-binding
component [Streptomyces coelicolor A3(2)]
Length = 315
Score = 80.8 bits (196), Expect = 1e-14
Identities = 64/246 (26%), Positives = 112/246 (45%), Gaps = 18/246 (7%)
Query: 2 LKIEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKII 61
+ +E E + L G++L V G H ++GPNG+GK+TL ++ + G++
Sbjct: 8 ITVEGARKEYGSKSALDGLDLTVTRGTVHGVLGPNGAGKTTLVRILS--TLLRPDAGRVE 65
Query: 62 FNGEDITSSSPDERARKGILLAFQVPPEIEGVRILDFLIQVLTEIKGMKPEEAYDVVLNK 121
G D+ + + R R G+L E G R + L + D +L +
Sbjct: 66 VAGHDVVAEAYAVRLRIGLLGQHAALDEELGGRQNLEMFGRLHHLGARGARARADELLVR 125
Query: 122 AKELWFDDKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSVISRK 181
F D R +SGG R+RL+L +L+ EP++L LDEP +G+D + +
Sbjct: 126 -----FGLSDTGRKPVGAYSGGMRRRLDLAASLITEPEVLFLDEPTTGLDPRGRAEVWDS 180
Query: 182 IEELHNRGVSIILITHYGRIFGHIDKEKLKVHVMKDGKIVKSGGSEIIDMIEREGFKAIF 241
+ L G +++L T Y D+ ++ V+ G++V G ++ + KA
Sbjct: 181 VRSLVGAGTTVLLTTQY---LEEADQLADRISVVDAGRVVADGTADEL--------KAAT 229
Query: 242 GGENVE 247
GG+ V+
Sbjct: 230 GGDRVD 235
>dbj|BAB07815.1| (AB036417) CysA protein [Acetabularia acetabulum]
Length = 357
Score = 80.8 bits (196), Expect = 1e-14
Identities = 67/241 (27%), Positives = 114/241 (46%), Gaps = 37/241 (15%)
Query: 17 LRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKIIFNGEDITSSSPDERA 76
+ G++L +N GE ++GP+GSGK+TL +AG + +T+GKI ++GED T S ++R
Sbjct: 27 VNGVDLEINSGEIVALLGPSGSGKTTLLRVMAGLEE--ITEGKIFYDGEDATDWSLEDRQ 84
Query: 77 RKGILLAFQVPPEIE-------GVRILDFLIQVLTEIKGMKPEEAYDVVLNKAKELWFDD 129
+ + + + G R+ I + +K E D+V E F
Sbjct: 85 IGFVFQGYALFKHLTVGDNIAFGPRMKKMDIDIRKRVK-----ELLDLVQLPGLESRFPQ 139
Query: 130 KDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSVISRKIEE-LHNR 188
+ SGG+R+R+ L +AL EP+LLLLDEP +D + + ++ + +
Sbjct: 140 Q---------LSGGQRQRIALARALAYEPRLLLLDEPFGALDPEIREDLRNSLKRIISSL 190
Query: 189 GVSIILITHYGRIFGHIDKEKL-----KVHVMKDGKIVKSGGSEIIDMIEREGFKAIFGG 243
++ +++TH D+E+ +V V G I + G E I + F F G
Sbjct: 191 NLTSVMVTH--------DQEEAFEVADRVVVFNKGSIEQVGSLEDIYRNPQTAFVMDFVG 242
Query: 244 E 244
E
Sbjct: 243 E 243
>pir||C69223 anion permease - Methanobacterium thermoautotrophicum (strain
Delta H) >gi|2622017|gb|AAB85418.1| (AE000867) anion
permease [Methanobacterium thermoautotrophicum]
Length = 357
Score = 80.4 bits (195), Expect = 2e-14
Identities = 68/246 (27%), Positives = 122/246 (48%), Gaps = 13/246 (5%)
Query: 2 LKIEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKII 61
L I++L +++ G ++R L ++ G++ VI+GP GSGKS TI G ++ G I
Sbjct: 4 LDIDNLEIDL-GEFVVRVDELHLSRGDYLVIIGPTGSGKSIFLETIMGF--FEPISGTIS 60
Query: 62 FNGEDITSSSPDERARKGILLAFQVPPEIEGVRILDFLIQVLTEIKGMKPEEAYDVVLNK 121
+G D+T+ P+ER + + P + + + ++ TE+K + +++
Sbjct: 61 LDGADLTTLPPEERDVSIVYQDHCLFPHMTVEENIAYGLRKQTEMKENIHRQVHEIAA-- 118
Query: 122 AKELWFDDKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSVISRK 181
+ D + R+ SGGE +R + +A+++ P+LLL+DEP S +D + + +
Sbjct: 119 ---MMGIDHVLNRYPGT-LSGGELQRASIARAIIVNPRLLLMDEPFSALDQRTKISLRKL 174
Query: 182 IEELH-NRGVSIILITHYGRIFGHIDKEKLKVHVMKDGKIVKSGGSEIIDMIEREGFKAI 240
I ++ N ++I +TH I KV VM GKI++ G E + F A
Sbjct: 175 IADIRDNFETTVIHVTH---DLDDIWWLSNKVAVMNHGKIIQMGKKEEVINKPSPYFVAD 231
Query: 241 FGGENV 246
F G N+
Sbjct: 232 FLGANI 237
>pir||E72378 sugar ABC transporter, ATP-binding protein - Thermotoga maritima
(strain MSB8) >gi|4980927|gb|AAD35506.1|AE001721_5
(AE001721) sugar ABC transporter, ATP-binding protein
[Thermotoga maritima]
Length = 359
Score = 80.4 bits (195), Expect = 2e-14
Identities = 61/226 (26%), Positives = 112/226 (48%), Gaps = 12/226 (5%)
Query: 19 GINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKIIFNGEDITSSSPDERARK 78
G++ V DGEF ++GP+G GK+T L +AG YK T G+I F+ + P R
Sbjct: 21 GVSFEVKDGEFVALLGPSGCGKTTTLLMLAGI--YKPTSGEIYFDDVLVNDIPPKYREVG 78
Query: 79 GILLAFQVPPEIEGVRILDFLIQVLTEIKGMKPEEAYDVVLNKAKELWFDDKDMRRFVNV 138
+ + + P + + F ++ + + +E V+ A++L D+ R+ +
Sbjct: 79 MVFQNYALYPHMTVFENIAFPLRA----RRISKDEVEKRVVEIARKLLIDNLLDRKPTQL 134
Query: 139 GFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSVISRKIEELHNR-GVSIILITH 197
SGG+++R+ L +AL+ +PK+LL DEP S +D + ++ +I+ L G++ + +TH
Sbjct: 135 --SGGQQQRVALARALVKQPKVLLFDEPLSNLDANLRMIMRAEIKHLQQELGITSVYVTH 192
Query: 198 YGRIFGHIDKEKLKVHVMKDGKIVKSGGSEIIDMIEREGFKAIFGG 243
++ V GK+V+ G + + + F A F G
Sbjct: 193 DQ---AEAMTMASRIAVFNQGKLVQYGTPDEVYDSPKNMFVASFIG 235
>pir||F64751 probable ABC-type transport protein b0262 - Escherichia coli
>gi|1552831|gb|AAB08683.1| (U70214) hypothetical
[Escherichia coli] >gi|1786457|gb|AAC73365.1| (AE000134)
putative ATP-binding component of a transport system
[Escherichia coli K12]
Length = 352
Score = 80.0 bits (194), Expect = 3e-14
Identities = 68/235 (28%), Positives = 118/235 (49%), Gaps = 22/235 (9%)
Query: 16 ILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKIIFNGEDITSSSPDER 75
++ INL + G+ ++GP+G GK+T+ +AG K ++G+I +GED+T S +R
Sbjct: 25 VIDNINLTIPQGQMVTLLGPSGCGKTTILRLVAGLEK--PSEGQIFIDGEDVTHRSIQQR 82
Query: 76 ARKGILLAFQVPPEIEGVRILDFLIQVL----TEIKGMKPEEAYDVVLNKAKELWFDDKD 131
+ ++ + P + + + +++L E+K E V L F+D
Sbjct: 83 DICMVFQSYALFPHMSLGENVGYGLKMLGVPRAELKARVKEALAMVDLEG-----FED-- 135
Query: 132 MRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSVISRKIEELHNR-GV 190
RFV+ SGG+++R+ L +AL+L+PK+LL DEP S +D + + KI EL + +
Sbjct: 136 --RFVDQ-ISGGQQQRVALARALILKPKVLLFDEPLSNLDANLRRSMRDKIRELQKQFDI 192
Query: 191 SIILITH-YGRIFGHIDKEKLKVHVMKDGKIVKSGGSEIIDMIEREGFKAIFGGE 244
+ + +TH F D V VM G I++ G + + F A F G+
Sbjct: 193 TSLYVTHDQSEAFAVSD----TVLVMNKGHIMQIGSPQDLYRQPASRFMASFMGD 243
>sp|P37009|AFUC_ECOLI PUTATIVE FERRIC TRANSPORT ATP-BINDING PROTEIN AFUC
Length = 348
Score = 80.0 bits (194), Expect = 3e-14
Identities = 68/235 (28%), Positives = 118/235 (49%), Gaps = 22/235 (9%)
Query: 16 ILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKIIFNGEDITSSSPDER 75
++ INL + G+ ++GP+G GK+T+ +AG K ++G+I +GED+T S +R
Sbjct: 21 VIDNINLTIPQGQMVTLLGPSGCGKTTILRLVAGLEK--PSEGQIFIDGEDVTHRSIQQR 78
Query: 76 ARKGILLAFQVPPEIEGVRILDFLIQVL----TEIKGMKPEEAYDVVLNKAKELWFDDKD 131
+ ++ + P + + + +++L E+K E V L F+D
Sbjct: 79 DICMVFQSYALFPHMSLGENVGYGLKMLGVPRAELKARVKEALAMVDLEG-----FED-- 131
Query: 132 MRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSVISRKIEELHNR-GV 190
RFV+ SGG+++R+ L +AL+L+PK+LL DEP S +D + + KI EL + +
Sbjct: 132 --RFVDQ-ISGGQQQRVALARALILKPKVLLFDEPLSNLDANLRRSMRDKIRELQKQFDI 188
Query: 191 SIILITH-YGRIFGHIDKEKLKVHVMKDGKIVKSGGSEIIDMIEREGFKAIFGGE 244
+ + +TH F D V VM G I++ G + + F A F G+
Sbjct: 189 TSLYVTHDQSEAFAVSD----TVLVMNKGHIMQIGSPQDLYRQPASRFMASFMGD 239
>pir||T35675 probable ABC-transport system ATP binding protein - Streptomyces
coelicolor >gi|2661682|emb|CAA15787.1| (AL009199)
probable ABC-transport system ATP binding protein
[Streptomyces coelicolor A3(2)]
Length = 260
Score = 80.0 bits (194), Expect = 3e-14
Identities = 68/235 (28%), Positives = 120/235 (50%), Gaps = 20/235 (8%)
Query: 15 EILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAG-HPKYKVTKGKIIFNGEDITSSSPD 73
+ L + L V+ GE ++G NG+GKSTL TIAG HP + +G I ++G ++ + P
Sbjct: 20 QALTDVELEVHAGEVVALVGDNGAGKSTLVKTIAGVHP---IDEGAIEWDGRSVSINRPH 76
Query: 74 ERARKGILLAFQVPPEIEGVRILDFLIQVLTEIK--GMKPEEAYDVVLNKAKELWFDDKD 131
+ GI +Q + + ++ L + EI+ G+ E + +++EL D
Sbjct: 77 DAQSLGIATVYQDLALCDNIDVVGNLY-LGREIRRRGVLDEVEME---RRSREL-LDTLS 131
Query: 132 MR----RFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSVISRKIEELHN 187
+R R SGG+R+ + + +++L EPKL++LDEP + + V+ + + +E L
Sbjct: 132 IRIPSVRIPIASLSGGQRQVVAIARSMLGEPKLVILDEPTAALGVEQTAQVLDLVERLRE 191
Query: 188 RGVSIILITHYGRIFGHIDKEKLKVHVMKDGKIVKSGGSEIIDMIEREGFKAIFG 242
RG ++ILI+H + KV V++ G+ +G E+ + E AI G
Sbjct: 192 RGHAVILISHN---MADVKAVADKVAVLRLGR--NNGVFEVKSTSQEEIISAITG 241
>pir||H75151 abc transporter, ATP-binding protein PAB0249 - Pyrococcus abyssi
(strain Orsay) >gi|5457805|emb|CAB49295.1| (AJ248284)
ABC transporter, ATP-binding protein [Pyrococcus abyssi]
Length = 280
Score = 80.0 bits (194), Expect = 3e-14
Identities = 69/234 (29%), Positives = 118/234 (49%), Gaps = 22/234 (9%)
Query: 17 LRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVT---KGKIIFNGEDITSSSPD 73
LR +NL V GEF I+GP+GSGKST LT+ G + + +G + +G + S
Sbjct: 21 LRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSINGEFEGNVFVDGLNTREHSVA 80
Query: 74 ERARKGILLAFQVP-PEIEGVRILDFLIQVLTEIKGMKPEEAYDVV--LNKAKELWFDDK 130
E + + + L FQ P ++ + +L+ + L + G++ EE + + K +LW
Sbjct: 81 ELSTR-VGLVFQNPDSQLFNMTVLEEVAFALENL-GVEREEMWRRIRWALKLVKLW---- 134
Query: 131 DMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSVISRKIEELH-NRG 189
D R SGGE++RL + L+++PK+L+LDEP S +D + + L+
Sbjct: 135 DKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLGREEVLSLVRLLNKEEK 194
Query: 190 VSIILITH-YGRIFGHIDKEKLKVHVMKDGKIVKSGGS----EIIDMIEREGFK 238
++IIL+ H + H D ++ V G++V G E ++ +ER G +
Sbjct: 195 ITIILVEHNTDFLLEHAD----RIVVFDGGRVVMEGKPEEVFENVEFLERIGIR 244
>sp|Q57554|Y089_METJA HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PROTEIN MJ0089
>gi|2127897|pir||A64311 ferric enterobactin transport
ATP-binding protein homolog - Methanococcus jannaschii
>gi|1498853|gb|AAB98070.1| (U67466) ferric enterobactin
transport ATP-binding protein [Methanococcus jannaschii]
Length = 254
Score = 79.6 bits (193), Expect = 3e-14
Identities = 73/250 (29%), Positives = 124/250 (49%), Gaps = 26/250 (10%)
Query: 1 MLKIEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKI 60
+L ++ + + R+IL I V GE I+G NG+GKSTL I + K +G I
Sbjct: 5 ILSVDGVEFAYKSRQILNNIKFEVKRGEVVSILGVNGAGKSTLLKCI--NKILKPKRGTI 62
Query: 61 IFNGEDITSSSPDERARKGILLAFQVPPEIEGVRILDFLIQVLTEIKGMKPEEAYDV--- 117
+ + DI + E A+K VP EG + F +L G KP ++V
Sbjct: 63 LIDNFDIKNLDNLELAKK----VGYVPQRAEGNYMTVFDAVLL----GRKPHIKWEVSDR 114
Query: 118 ---VLNKAKELWFDDKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDV-D 173
+ +K +L + R+ N SGGE +++ + +AL+ EP++LLLDEP + +D+ +
Sbjct: 115 DIEITHKVLKLLNLEDYALRYTNE-LSGGELQKVIIARALVQEPQILLLDEPTNNLDLKN 173
Query: 174 SLSVISRKIEELHNRGVSIILITH-YGRIFGHIDKEKLKVHVMKDGKIVKSGGSEIIDMI 232
L V+ ++ ++ ++ I++ H + D K ++KDG I GG E+I+
Sbjct: 174 QLEVMKIIMDISKSQNIASIVVMHDLNLALRYSD----KFIMLKDGVIYAEGGREVIN-- 227
Query: 233 EREGFKAIFG 242
E KA++G
Sbjct: 228 -PENIKAVYG 236
>gb|AAC27495.1| (AF077856) PotA [Actinobacillus actinomycetemcomitans]
Length = 372
Score = 79.6 bits (193), Expect = 3e-14
Identities = 62/235 (26%), Positives = 121/235 (51%), Gaps = 22/235 (9%)
Query: 16 ILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKIIFNGEDITSSSPDER 75
I++ NL +N+GEF I+GP+G GK+T+ +AG ++ G II +GEDIT+ ++R
Sbjct: 25 IIKDFNLTINNGEFLTILGPSGCGKTTVLRLLAG--LEELDSGNIILDGEDITNVPAEKR 82
Query: 76 ARKGILLAFQVPPEIEGVRILDFLIQVLTEIKGMKPEEAYDVVLNKAKELWFDDKDMRRF 135
+ ++ + P + + F ++ ++ + E VL + + ++ R+
Sbjct: 83 HVNTVFQSYALFPHMTIFENVAFGLR----MQKVPEAEIKPRVLEALRMVQLEEMADRKP 138
Query: 136 VNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSVISRKIEELHNR-GVSIIL 194
+ SGG+++R+ + +A++ +PK+LLLDE S +D + +++ L + G++ I
Sbjct: 139 TQL--SGGQQQRIAIARAVVNKPKVLLLDESLSALDYKLRKQMQYELKVLQRQLGITFIF 196
Query: 195 ITHYGRIFGHIDKEKL-----KVHVMKDGKIVKSGGSEIIDMIEREGFKAIFGGE 244
+TH D+E+ ++ +++ GKI + G I F A F GE
Sbjct: 197 VTH--------DQEEAITMSDRIVLLRKGKIAQDGSPREIYEEPANLFVARFIGE 243
>pir||G75200 cobalt abc transporter, ATP-binding protein (cbio) PAB2260 -
Pyrococcus abyssi (strain Orsay)
>gi|5457563|emb|CAB49054.1| (AJ248283) cobalt ABC
transporter, ATP-binding protein (cbiO) [Pyrococcus
abyssi]
Length = 260
Score = 79.6 bits (193), Expect = 3e-14
Identities = 71/235 (30%), Positives = 112/235 (47%), Gaps = 21/235 (8%)
Query: 12 EGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKIIFNGEDITSSS 71
+G+ +L+ IN G I+GPNGSGK+TL + G K K KG +I +G + S
Sbjct: 13 DGKYVLKSINFRFKGGTL-AIVGPNGSGKTTLVKMMNGLLKPK--KGDVIIDGINTRDKS 69
Query: 72 PDERARKGILLAFQVPPEIEGVRILDFLIQVLTEIK------GMKPEEAYDVVLNKAKEL 125
E +R + FQ P + F V E+ G+ EE V +E+
Sbjct: 70 VAEMSRL-VGYVFQNPDA------MFFEENVFKEVAFGPRNLGLSEEEVEKRVRWALREV 122
Query: 126 WFDDKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSVISRKIEEL 185
+ + R + + SGGE++RL + L ++PK L+LDEP++G+D L + I +L
Sbjct: 123 GLEGFEDRSPLEL--SGGEKQRLAIACILAMKPKYLVLDEPNTGLDERGLRGLINVIRKL 180
Query: 186 HNRGVSIILITHYGRIFGHIDKEKLKVHVMKDGKIVKSGGSEIIDMIEREGFKAI 240
SIIL+TH + + E L ++KDG+I G E ++ F +
Sbjct: 181 REDNHSIILVTHDMELVLEVADEVL---LLKDGEIKFFGPVEDFFKLDLRNFSLV 232
>pir||A83621 probable ATP-binding component of ABC transporter PA0206 [imported]
- Pseudomonas aeruginosa (strain PAO1)
>gi|9946041|gb|AAG03595.1|AE004458_10 (AE004458)
probable ATP-binding component of ABC transporter
[Pseudomonas aeruginosa]
Length = 370
Score = 79.6 bits (193), Expect = 3e-14
Identities = 67/243 (27%), Positives = 123/243 (50%), Gaps = 28/243 (11%)
Query: 13 GREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKIIFNGEDITSSSP 72
G L+ ++L + D EF ++GP+G GK+TL IAG T+G+I+ GE+I + P
Sbjct: 27 GPVALKRVDLDIRDNEFFTLLGPSGCGKTTLLRMIAGFE--FPTEGEILLYGENIAARPP 84
Query: 73 DERARKGILLAFQVPPEIEGVRILDFLIQVLTEIKGMKPEEAYDVVLNKAKELWFDDKDM 132
ER + + + P + L F ++ + + E + + +E+ M
Sbjct: 85 FERPVNTVFQHYALFPHMSIAENLAFGLESRPLGRSLGKAE----IAERVREM-LALVQM 139
Query: 133 RRFVN---VGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSVISRKIEELHNR- 188
RF + SGG+++R+ L +AL +P++LLLDEP S +D+ + +++ + +
Sbjct: 140 ERFADRRPGQLSGGQQQRVALARALAPQPRVLLLDEPLSALDLKLRQAMREELKAIQAKT 199
Query: 189 GVSIILITHYGRIFGHIDKEKL-----KVHVMKDGKIVKSGGSEIIDMIEREG--FKAIF 241
G++ I +TH D+E+ ++ V+ +G++ + G E ++ ER G F A F
Sbjct: 200 GITFIFVTH--------DQEEALTMSDRIAVLSEGQVQQVGPPE--EIYERPGNRFVADF 249
Query: 242 GGE 244
GE
Sbjct: 250 IGE 252
>emb|CAC08315.1| (AL392149) putative ABC transport system ATP-binding protein
[Streptomyces coelicolor A3(2)]
Length = 336
Score = 79.6 bits (193), Expect = 3e-14
Identities = 63/246 (25%), Positives = 110/246 (44%), Gaps = 18/246 (7%)
Query: 2 LKIEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKII 61
++ E L + L G +L V +G H ++GPNG+GK+T ++ ++ G+
Sbjct: 7 VRAEGLEKRYGDKRALDGFDLTVREGTVHGLLGPNGAGKTTAVRILS--TLIRLDGGRAE 64
Query: 62 FNGEDITSSSPDERARKGILLAFQVPPEIEGVRILDFLIQVLTEIKGMKPEEAYDVVLNK 121
G DI + + RAR G+ + E+ R + L + G + +L +
Sbjct: 65 VAGLDIARQAREVRARIGLTGQYAAVDEVLTGRQNLEMFGRLFHLGGRRARARAVELLEQ 124
Query: 122 AKELWFDDKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSVISRK 181
FD D +SGG R+RL+L +++L P +L LDEP +G+D S +
Sbjct: 125 -----FDLTDAADRGVGKYSGGMRRRLDLAASMILAPSVLFLDEPTTGLDPRSRGEVWES 179
Query: 182 IEELHNRGVSIILITHYGRIFGHIDKEKLKVHVMKDGKIVKSGGSEIIDMIEREGFKAIF 241
+ EL G +++L T Y DK ++ V+ G+ + +G K +
Sbjct: 180 VRELVASGTTVLLTTQY---LEEADKLASRITVIDRGRAIADD--------TPDGLKNLV 228
Query: 242 GGENVE 247
GG+ +E
Sbjct: 229 GGDRIE 234
>sp|P23858|POTA_ECOLI SPERMIDINE/PUTRESCINE TRANSPORT ATP-BINDING PROTEIN POTA
>gi|96440|pir||A40840 spermidine/putrescine transport
protein potA [validated] - Escherichia coli
>gi|147326|gb|AAC37038.1| (M64519) transport protein
[Escherichia coli] >gi|1651555|dbj|BAA35948.1| (D90748)
Spermidine/putrescine transport protein A [Escherichia
coli] >gi|1787370|gb|AAC74210.1| (AE000212) ATP-binding
component of spermidine/putrescine transport
[Escherichia coli K12]
Length = 378
Score = 79.2 bits (192), Expect = 4e-14
Identities = 60/239 (25%), Positives = 118/239 (49%), Gaps = 22/239 (9%)
Query: 12 EGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKIIFNGEDITSSS 71
+G+E++ ++L +N+GEF ++GP+G GK+T+ IAG V G+I+ + EDIT
Sbjct: 28 DGKEVIPQLDLTINNGEFLTLLGPSGCGKTTVLRLIAG--LETVDSGRIMLDNEDITHVP 85
Query: 72 PDERARKGILLAFQVPPEIEGVRILDFLIQVLTEIKGMKPEEAYDVVLNKAKELWFDDKD 131
+ R + ++ + P + + F +++ + + E + K
Sbjct: 86 AENRYVNTVFQSYALFPHMTVFENVAFGLRMQKTPAAEITPRVMEALRMVQLETFAQRKP 145
Query: 132 MRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSVISRKIEELHNR-GV 190
+ SGG+++R+ + +A++ +P+LLLLDE S +D + +++ L + G+
Sbjct: 146 HQ------LSGGQQQRVAIARAVVNKPRLLLLDESLSALDYKLRKQMQNELKALQRKLGI 199
Query: 191 SIILITHYGRIFGHIDKEKL-----KVHVMKDGKIVKSGGSEIIDMIEREGFKAIFGGE 244
+ + +TH D+E+ ++ VM+DG+I + G I + F A F GE
Sbjct: 200 TFVFVTH--------DQEEALTMSDRIVVMRDGRIEQDGTPREIYEEPKNLFVAGFIGE 250
>pir||S74440 iron(III) dicitrate transport system permease protein fecE -
Synechocystis sp. (strain PCC 6803)
>gi|1651664|dbj|BAA16592.1| (D90899) iron(III) dicitrate
transport system permease protein FecE [Synechocystis
sp.]
Length = 268
Score = 79.2 bits (192), Expect = 4e-14
Identities = 71/256 (27%), Positives = 124/256 (47%), Gaps = 30/256 (11%)
Query: 2 LKIEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKII 61
L L + + I++G++LA+N GE ++GPNG GKSTL +A K G +
Sbjct: 10 LTTRKLSLAYDSHLIIQGLDLAINQGEITTLVGPNGCGKSTLLRGMA--RLLKPQGGTVY 67
Query: 62 FNGEDITSSSPDERARK-GILLAFQVPPEIEGVRILDFLIQVLTEIKGMKPEEAYDVVLN 120
GE I E A++ GIL Q PP EG+ + + + Q G P + + +
Sbjct: 68 LEGEAIAHLPTKELAKRLGILP--QSPPAPEGLTVRELVAQ------GRYPHQNWLQQWS 119
Query: 121 KAKELWFDD----KDMRRFVN---VGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVD 173
K EL ++ D+ +F N SGG+R+R + AL + ++LLLDEP + +D+
Sbjct: 120 KQDELKVEEAIATTDLHQFANRPLDSLSGGQRQRAWIAMALAQDTEILLLDEPTTYLDLA 179
Query: 174 SLSVISRKIEELHNR-GVSIILITHYGRI---FGHIDKEKLKVHVMKDGKIVKSGGSEII 229
+ + L+ G +I+++ H + + H ++ ++DGK++ G + I
Sbjct: 180 HQIEVLDLLHWLNREAGRTIVMVLHDLNLACRYSH------RLIALRDGKLLAQGRPQAI 233
Query: 230 DMIEREGFKAIFGGEN 245
+ E + +FG E+
Sbjct: 234 --VTEELVRQVFGLES 247
>pir||H70610 probable ABC-typetransmembrane transport portein - Mycobacterium
tuberculosis (strain H37RV) >gi|3261727|emb|CAB07840.1|
(Z93777) hypothetical protein Rv1218c [Mycobacterium
tuberculosis]
Length = 311
Score = 78.8 bits (191), Expect = 6e-14
Identities = 65/229 (28%), Positives = 103/229 (44%), Gaps = 17/229 (7%)
Query: 17 LRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKIIFNGEDITSSSPDERA 76
L G++L V +GE H +GPNG+GKST + G K G + G D + + D
Sbjct: 25 LDGLDLTVREGEVHGFLGPNGAGKSTTLRILLG--LVKADGGSVRLLGGDPWTDAVDLHR 82
Query: 77 RKGILLA-FQVPPEIEGVRILDFLIQVLTEIKGMKPEEAYDVVLNKAKELWFDDKDMRRF 135
+ + P + G +D L ++ I + E + D R
Sbjct: 83 HIAYVPGDVTLWPSLTGGETIDLLARMRGGIDNARRAELIE-------RFGLDPTKKART 135
Query: 136 VNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSVISRKIEELHNRGVSIILI 195
+S G R+++ L+ AL LLLLDEP SG+D +V + I E RGV+++L
Sbjct: 136 ----YSKGNRQKVSLISALSSHATLLLLDEPSSGLDPLMENVFQQCIGEARQRGVTVLLS 191
Query: 196 THYGRIFGHIDKEKLKVHVMKDGKIVKSGGSEIIDMIEREGFKAIFGGE 244
+H I + KV +++ GK V+SG + + + R KA G+
Sbjct: 192 SH---ILAETEALCEKVTIIRAGKTVESGSLDALRHLSRTSIKAEMIGD 237
>pir||E75412 spermidine/putrescine ABC transporter, ATP-binding protein -
Deinococcus radiodurans (strain R1)
>gi|6459050|gb|AAF10872.1|AE001977_5 (AE001977)
spermidine/putrescine ABC transporter, ATP-binding
protein [Deinococcus radiodurans]
Length = 362
Score = 78.8 bits (191), Expect = 6e-14
Identities = 61/239 (25%), Positives = 114/239 (47%), Gaps = 28/239 (11%)
Query: 16 ILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKIIFNGEDITSSSPDER 75
+L+ I+L + GEF ++GP+G GK+TL +AG + G ++ G D+T R
Sbjct: 20 VLKDIDLDIRRGEFFSLLGPSGCGKTTLLRILAGFEQ--ADSGAVVIGGRDMTGIPAHRR 77
Query: 76 ARKGILLAFQVPPEIEGVRILDFLIQVLTEIKGMKPEEAYDVVLNKAKELWFDDKDMRRF 135
+ ++ + P + + F G+K + L + E + + +F
Sbjct: 78 PVNTVFQSYALFPHLSVADNVAF---------GLKQKGVRGAELRQRVERAMETVQIGQF 128
Query: 136 VNVG---FSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSVISRKIEEL-HNRGVS 191
N SGG+R+R+ L +A++ +P++LLLDEP S +D+ + ++ L + G++
Sbjct: 129 GNRKPDQLSGGQRQRVALARAIVNQPEVLLLDEPLSALDLKLRKQLQVELSNLQEDLGIT 188
Query: 192 IILITHYGRIFGHIDKEKL-----KVHVMKDGKIVKSGGSEIIDMIEREGFKAIFGGEN 245
+ +TH D+E+ ++ VM G+I + G +E + R F A F G +
Sbjct: 189 FVFVTH--------DQEEALVMSDRIAVMNQGRIEQLGRAEDLYERPRTAFVANFLGSS 239
>pir||T46950 probable ATPase component of 2-aminoethylphosphonate transporter
phnT [imported] - Salmonella typhimurium
>gi|1763082|gb|AAB39645.1| (U69493) PhnT [Salmonella
typhimurium]
Length = 369
Score = 78.0 bits (189), Expect = 1e-13
Identities = 61/247 (24%), Positives = 116/247 (46%), Gaps = 23/247 (9%)
Query: 4 IEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKIIFN 63
++ L V G +L+ ++L + GE ++GP+GSGK+T+ +AG + G+I+
Sbjct: 21 LDSLRVAYHGNVVLKPLSLTIEPGEVLALIGPSGSGKTTVLRAVAGF--VQPAGGRILIG 78
Query: 64 GEDITSSSPDERARKGILLAFQVPPEIEGVRILDFLIQVLTEIKGMKPEEAYDVVLNKAK 123
D+T P +R ++ + + P ++ + F ++ + K + E V K
Sbjct: 79 DTDVTHLPPYKRGLAMVVQNYALFPHLKVEDNVAFGLRAQKQPKALINER----VTQALK 134
Query: 124 ELWFDDKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSVISRKIE 183
+ D R SGG+++R+ + +A+ + P++LLLDEP S +D + +I
Sbjct: 135 TVGMSDYAAR--YPHQLSGGQQQRVAIARAIAVRPRVLLLDEPLSALDAQIRHNMVEEIA 192
Query: 184 ELHNR--GVSIILITHYGRIFGHIDKEKL-----KVHVMKDGKIVKSGGSEIIDMIEREG 236
LH ++I+ +TH D+ + K+ +MKDG ++ G + +
Sbjct: 193 RLHRELPELTILYVTH--------DQTEALTLADKIGIMKDGSLIAHGETRALYQHPPNR 244
Query: 237 FKAIFGG 243
F A F G
Sbjct: 245 FAAEFLG 251
>pir||G75203 abc transporter, ATP-binding protein PAB0103 - Pyrococcus abyssi
(strain Orsay) >gi|5457587|emb|CAB49078.1| (AJ248283)
ABC transporter, ATP-binding protein [Pyrococcus abyssi]
Length = 344
Score = 78.0 bits (189), Expect = 1e-13
Identities = 71/248 (28%), Positives = 126/248 (50%), Gaps = 14/248 (5%)
Query: 1 MLKIEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKI 60
ML++E + + + + LR I+ V E +I+GP+G+GK+ L IAG + +G+I
Sbjct: 1 MLRVESVSKDYKEFK-LRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGI--IEPDEGRI 57
Query: 61 IFNGEDITSSSPDERARKGILLAFQVPPEIEGVRILDFLIQVLTEIKGMKPEEAYDVVLN 120
I NG D+TS P++R I + + P + + F ++ ++ + +E V
Sbjct: 58 ILNGVDVTSYPPEKRNLAYIPQDYALFPHMTVYDNIAFGLK----LRRISRQEIDRKVKE 113
Query: 121 KAKELWFDDKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSVISR 180
+K L + R+ + SGGE++R+ + +AL++EP+LLLLDEP + +DV + S
Sbjct: 114 ISKVLGIEHLLHRKPRTL--SGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMT 171
Query: 181 KIEELHNR-GVSIILITHYGRIFGHIDKEKLKVHVMKDGKIVKSGG-SEIIDMIEREGFK 238
+++ G + + +TH F +V VM G++V+ G E+ EG
Sbjct: 172 EMKVWRKELGFTSLHVTH---SFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVA 228
Query: 239 AIFGGENV 246
G EN+
Sbjct: 229 RFLGFENI 236
>pir||H82224 probable vitamin B12 ABC transporter, ATP-binding protein BtuD
VC1245 [imported] - Vibrio cholerae (group O1 strain
N16961) >gi|9655727|gb|AAF94404.1| (AE004203) vitamin
B12 ABC transporter, ATP-binding protein BtuD, putative
[Vibrio cholerae]
Length = 251
Score = 78.0 bits (189), Expect = 1e-13
Identities = 67/250 (26%), Positives = 126/250 (49%), Gaps = 24/250 (9%)
Query: 1 MLKIEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKI 60
M+++ L V+ L ++L N GE ++GPNG GKSTL +AG + G +
Sbjct: 1 MIRVNSLQVDSR----LLPLSLQANAGEVWHVIGPNGCGKSTLLAALAGMIPF---SGSV 53
Query: 61 IFNGEDITSSSPDERARKGILLAFQVPPEIEGVRILDFLIQVLTEIKGMKPEEAYDVVLN 120
+G D++ +S E AR LA P + + + +L + ++ E +
Sbjct: 54 QVDGLDVSQASLSELARHRAYLAQNNKPSFQ-LHVFQYLALSVPANVALECSEVASEIDQ 112
Query: 121 KAKELWFDDKDMRRFVNVGFSGGERKRLELLQALL-----LEP--KLLLLDEPDSGVDVD 173
++ L DDK + R ++ SGGE +R+ L + L L P +LL+ DEP + +D+
Sbjct: 113 ISRLLNIDDK-LHRSIH-QLSGGEWQRVRLAGSCLQVSPVLNPSARLLIWDEPAAPLDIA 170
Query: 174 SLSVISRKIEELHNRGVSIILITH-YGRIFGHIDKEKLKVHVMKDGKIVKSGGSEIIDMI 232
S++ R IE + +G+++I+ H R H D +V ++ G + ++G ++ +++
Sbjct: 171 QESLLYRLIERMAGQGLTVIMANHDLNRTLRHAD----QVLLLSRGVLYRAGSAK--EVL 224
Query: 233 EREGFKAIFG 242
+E +++FG
Sbjct: 225 TQEVLQSVFG 234
>sp|P77795|YDCT_ECOLI HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PROTEIN YDCT
>gi|7445684|pir||D64896 probable ABC-type transport
protein b1441 - Escherichia coli
>gi|1742349|dbj|BAA15070.1| (D90783)
Spermidine/putrescine transport ATP-binding protein
PotA. [Escherichia coli] >gi|1742356|dbj|BAA15076.1|
(D90784) Spermidine/putrescine transport ATP-binding
protein PotA. [Escherichia coli]
>gi|1787712|gb|AAC74523.1| (AE000241) putative
ATP-binding component of a transport system [Escherichia
coli K12]
Length = 337
Score = 77.6 bits (188), Expect = 1e-13
Identities = 63/227 (27%), Positives = 117/227 (50%), Gaps = 14/227 (6%)
Query: 19 GINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKIIFNGEDITSSSPDERARK 78
G+++A+ DGEF ++GP+GSGK+T IAG +++ G I G+ ++ P ER
Sbjct: 22 GVSIAIKDGEFFSMLGPSGSGKTTCLRLIAGFE--QLSGGAISIFGKPASNLPPWERDVN 79
Query: 79 GILLAFQVPPEIEGVRILDFLIQVLTEIKGMKPEEAYDVVLNKAKELWFDDKDMRRFVNV 138
+ + + P + ILD + L +KG+ ++ + + +++ R+ +
Sbjct: 80 TVFQDYALFPHMS---ILDNVAYGLM-VKGVNKKQRHAMAQEALEKVALGFVHQRKPSQL 135
Query: 139 GFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSVISRKIEEL-HNRGVSIILITH 197
SGG+R+R+ + +AL+ EP++LLLDEP +D+ + ++++L + G++ I +TH
Sbjct: 136 --SGGQRQRVAIARALVNEPRVLLLDEPLGALDLKLREQMQLELKKLQQSLGITFIFVTH 193
Query: 198 -YGRIFGHIDKEKLKVHVMKDGKIVKSGGSEIIDMIEREGFKAIFGG 243
G D +V V +G+I + + M R F A F G
Sbjct: 194 DQGEALSMSD----RVAVFNNGRIEQVDSPRDLYMRPRTPFVAGFVG 236
>pir||T03550 ATP-binding transport protein polk - Rhodobacter capsulatus
>gi|3128351|gb|AAC16203.1| (AF010496) ATP-binding
transport protein polk [Rhodobacter capsulatus]
Length = 332
Score = 77.6 bits (188), Expect = 1e-13
Identities = 67/234 (28%), Positives = 119/234 (50%), Gaps = 20/234 (8%)
Query: 15 EILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKIIFNGEDITSSSPDE 74
E++ I+LA+NDGEF V +GP+G GKSTL IAG V+ G + +G+D T+++P +
Sbjct: 17 EVIPPIDLAINDGEFVVFVGPSGCGKSTLLRLIAG--LEDVSGGVVEIDGKDATATAPAD 74
Query: 75 RARKGILLAFQVPPEIEGVRILDFLIQV--LTEIKGMKPEEAYDVVLNKAKELWFDDKDM 132
R + ++ + P + + + F +++ L + +A VLN + D K
Sbjct: 75 RGLAMVFQSYALYPHMSVKKNIAFPLKMAKLPAAEIEAKVQAAAKVLNLT--AYLDRKPG 132
Query: 133 RRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSVISRKIEELHNR-GVS 191
+ SGG+R+R+ + +A++ P+ L DEP S +D + +I ELH+ +
Sbjct: 133 Q------LSGGQRQRVAIGRAIVRNPQAFLFDEPLSNLDAALRVNMRLEISELHHSLKTT 186
Query: 192 IILITHYGRIFGHIDKEKL--KVHVMKDGKIVKSGGSEIIDMIEREGFKAIFGG 243
+I +TH ++ + K+ V++ G+I + G + R F A F G
Sbjct: 187 MIYVTH-----DQVEAMTMADKIVVLQAGRIEQVGSPLELYRTPRNRFVAGFIG 235
>emb|CAB65650.1| (AJ252160) putative ABC-transporter ATP-binding protein
[Alicyclobacillus acidocaldarius]
Length = 393
Score = 77.3 bits (187), Expect = 2e-13
Identities = 65/241 (26%), Positives = 120/241 (48%), Gaps = 26/241 (10%)
Query: 13 GREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKIIFNGEDITSSSP 72
G +RG++ + +GE ++GP+GSGK+T+ IAG + TKG + G+ +T P
Sbjct: 15 GARSVRGVSFQIREGEMVGLLGPSGSGKTTILRLIAG--LERPTKGDVWIGGKRVTDLPP 72
Query: 73 DERARKGILLAFQVPPEIEGVRILDFLIQVLTEIKGMKPEEAYDVVLNKAKELWFDDKDM 132
+R + L FQ + + + D + L E + P++ D + + +
Sbjct: 73 QKR---NVGLVFQNYALFQHMTVYDNVSFGLREKR--VPKDEMDARVRELLRFMRLESYA 127
Query: 133 RRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSVISRKIEELHNR-GVS 191
RF + SGG+++R+ L +AL P++LL DEP + +D + + ++H+ GV+
Sbjct: 128 NRFPH-ELSGGQQQRVALARALAPRPQVLLFDEPFAAIDTQIRRELRTFVRQVHDEMGVT 186
Query: 192 IILITHYGRIFGHIDKEKL-----KVHVMKDGKIVKSGGSEIIDMIEREG--FKAIFGGE 244
+ +TH D+E+ +V V+ +G + + G E ++ E+ G F A F GE
Sbjct: 187 SVFVTH--------DQEEALEVADRVLVLHEGNVEQFGTPE--EVYEKPGTLFVASFIGE 236
Query: 245 N 245
+
Sbjct: 237 S 237
>dbj|BAA77930.1| (D83536) Hypothetical ABC transporter ATP-binding protein in
thrW-argF intergenic region. [Escherichia coli]
Length = 348
Score = 76.9 bits (186), Expect = 2e-13
Identities = 67/235 (28%), Positives = 117/235 (49%), Gaps = 22/235 (9%)
Query: 16 ILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKIIFNGEDITSSSPDER 75
++ INL + G+ ++GP+G GK+T+ +AG K ++G+I +GED+T S +R
Sbjct: 21 VIDNINLTIPQGQMVTLLGPSGCGKTTILRLVAGLEK--PSEGQIFIDGEDVTHRSIQQR 78
Query: 76 ARKGILLAFQVPPEIEGVRILDFLIQVL----TEIKGMKPEEAYDVVLNKAKELWFDDKD 131
+ ++ + P + + + +++L E+K E V L F+D
Sbjct: 79 DICMVFQSYALFPHMSLGENVGYGLKMLGVPRAELKARVKEALAMVDLEG-----FED-- 131
Query: 132 MRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSVISRKIEELHNR-GV 190
RFV+ SGG+++R+ +AL+L+PK+LL DEP S +D + + KI EL + +
Sbjct: 132 --RFVDQ-ISGGQQQRVAWPRALILKPKVLLFDEPLSNLDANLRRSMRDKIRELQKQFDI 188
Query: 191 SIILITH-YGRIFGHIDKEKLKVHVMKDGKIVKSGGSEIIDMIEREGFKAIFGGE 244
+ + +TH F D V VM G I++ G + + F A F G+
Sbjct: 189 TSLYVTHDQSEAFAVSD----TVLVMNKGHIMQIGSPQDLYRQPASRFMASFMGD 239
>pir||F82198 probable toxin secretion transporter VC1446 [imported] - Vibrio
cholerae (group O1 strain N16961)
>gi|9655946|gb|AAF94603.1| (AE004223) toxin secretion
transporter, putative [Vibrio cholerae]
Length = 721
Score = 76.9 bits (186), Expect = 2e-13
Identities = 64/234 (27%), Positives = 114/234 (48%), Gaps = 27/234 (11%)
Query: 15 EILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKIIFNGEDITSSSPDE 74
E+L ++L + G+F + GP+GSGKSTL + Y G+++ +G D+ + P
Sbjct: 497 EVLANLSLKIKPGQFIGVTGPSGSGKSTLTRLL--QRLYVPQHGQVLVDGMDLAIADPVS 554
Query: 75 RARKGILLAFQVPPEIEGVRILDFLIQVLTEIKGMKPEEAYDVVLNKAK---ELWFDDKD 131
R+ + + Q G V I+ KP+ + + + + A+ L F +
Sbjct: 555 -LRRNMSVVLQESILFSG--------SVADNIRLCKPQASDEEIRHAAQLAGALAFIEGL 605
Query: 132 MRRF------VNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSVISRKIEEL 185
F SGG+R+R+ L +ALL+ P++LLLDE S +D +S + I ++E+
Sbjct: 606 PHGFNQPVGEKGAALSGGQRQRIALARALLVNPRILLLDEATSALDYNSEASIMSNMDEI 665
Query: 186 HNRGVSIILITHYGRIFGHIDKEKLKVHVMKDGKIVKSGGSEIIDMIEREGFKA 239
RG ++I I H H D + V+ G++ +SG E +++ ++G A
Sbjct: 666 -CRGRTVISIAHRLNTIRHAD----NIFVLDKGQVAESGTHE--ELLAQQGLYA 712
>gb|AAG10493.1|AF279106_55 (AF279106) predicted ABC transporter ATPase subunit [uncultured
proteobacterium EBAC31A08]
Length = 532
Score = 76.9 bits (186), Expect = 2e-13
Identities = 62/204 (30%), Positives = 105/204 (51%), Gaps = 20/204 (9%)
Query: 32 IMGPNGSGKSTLALTIAGHPKYKVTKGKIIFNGEDITSSSPDERA--RKGILLAFQVP-- 87
++G +GSGKSTL IA YK G I F G DI S+S E +K + + FQ P
Sbjct: 315 LVGESGSGKSTLGKAIANLVSYK---GNIKFEGRDINSNSQKENKELKKNVQIVFQDPYG 371
Query: 88 ---PEIEGVRILDFLIQVLTEIKGMKPEEAYDVVLNKAK-ELWFDDKDMRRFVNVGFSGG 143
P + I+ + V ++ + +E D VL+ E+ +K F SGG
Sbjct: 372 SLSPRMTVGEIVGEGLGVHFKLTKKERDERIDKVLSDVGIEIVAKNKYPHEF-----SGG 426
Query: 144 ERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSVISRKIEELHNR-GVSIILITHYGRIF 202
+R+R+ + ++L++ P ++LDEP S +D + ++E+ N G++ + I+H ++
Sbjct: 427 QRQRIAIARSLIMNPAFMILDEPTSALDRSIQIQVIDLLKEIQNEYGLTYLFISHDLKVI 486
Query: 203 GHIDKEKLKVHVMKDGKIVKSGGS 226
+ + VMK+G+IV+SG S
Sbjct: 487 RSMSD---FIFVMKNGEIVESGPS 507
Score = 71.8 bits (173), Expect = 7e-12
Identities = 68/260 (26%), Positives = 130/260 (49%), Gaps = 19/260 (7%)
Query: 1 MLKIEDLHVEVEGREIL----RGINLAVNDGEFHVIMGPNGSGKSTLALTIAG---HPKY 53
+L++ DL + R+ L I+ + + ++G +GSGKS A++I P+
Sbjct: 4 ILEVSDLSINFSTRDGLFNAVDNISFDIEKNQTLALVGESGSGKSVTAMSILQLLQKPQA 63
Query: 54 KVTK-GKIIFNGEDITSSSPDER-ARKGILLAFQVPPEIEGVRILDFLIQVLTEIKGMKP 111
+K I FNG++I ++ ++ + +G +++ + + + +TE +
Sbjct: 64 SYSKESSIKFNGDEIINAKYEKLLSLRGNIISMIFQEPMTSLNPYHRVGNQITESILLHS 123
Query: 112 EEAYDVVLNKAKELW----FDDKDMRRFVNVG-FSGGERKRLELLQALLLEPKLLLLDEP 166
+ + +++AK+L DD + R + SGG+R+R+ + AL+ +P+LL+ DEP
Sbjct: 124 KSSKKDAIDEAKKLMALVEIDDVERRFYAYPHELSGGQRQRVMIAMALVNKPELLIADEP 183
Query: 167 DSGVDVDSLSVISRKIEELHNR-GVSIILITHYGRIFGHIDKEKLKVHVMKDGKIVKSGG 225
+ +DV + I + +L N G+SI+ ITH G + + V VMK+GKIV+ G
Sbjct: 184 TTALDVTIQAQILDLMSKLKNELGMSILFITH---DLGLVQEFSDNVCVMKNGKIVEQGN 240
Query: 226 S-EIIDMIEREGFKAIFGGE 244
+ E+ + E K + E
Sbjct: 241 TVEVFNNPSHEYTKKLLDAE 260
>gb|AAG20488.1| (AE005121) sulfate transport system ATP-binding protein; CysA
[Halobacterium sp. NRC-1]
Length = 343
Score = 76.9 bits (186), Expect = 2e-13
Identities = 59/227 (25%), Positives = 107/227 (46%), Gaps = 11/227 (4%)
Query: 20 INLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKIIFNGEDITSSSPDERARKG 79
+++++ DGEF ++GP+G GK+T IAG +G+I+F ++ P++R
Sbjct: 23 VSVSIADGEFFTLVGPSGCGKTTTLRLIAGFET--PDRGEIVFGDRSVSGVPPEDRDVGI 80
Query: 80 ILLAFQVPPEIEGVRILDFLIQVLTEIKGMKPEEAYDVVLNKAKELWFDDKDMRRFVNVG 139
+ ++ + P + + + ++ G EE +L+ D++
Sbjct: 81 VFQSYALFPHMTVRENVAYGLRFREPPGGASTEERVSELLSLVDLAGTGDREP-----AA 135
Query: 140 FSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSVISRKIEELHNR-GVSIILITHY 198
SGG+++R+ L +AL P +LLLDEP S +D + I+E+ ++ + +TH
Sbjct: 136 LSGGQQQRVALARALAPGPSVLLLDEPMSALDARLRDRLRGTIKEIQRELDITTVYVTHD 195
Query: 199 GRIFGHIDKEKLKVHVMKDGKIVKSGGSEIIDMIEREGFKAIFGGEN 245
I +V VM+DG +V+ G E + F A F GEN
Sbjct: 196 QAEALSISD---RVAVMRDGAVVQVGTPEAVYREPSSRFVAEFVGEN 239
>emb|CAB70952.1| (AJ271599) putative ATP-binding subunit [Anabaena PCC7120]
Length = 273
Score = 76.5 bits (185), Expect = 3e-13
Identities = 66/238 (27%), Positives = 117/238 (48%), Gaps = 16/238 (6%)
Query: 16 ILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKIIFNGEDITSSSPDER 75
ILR ++L V +G+ ++G NG GK+TL TI G K G I G I S SPD+R
Sbjct: 6 ILRNVDLTVPNGQMICLIGRNGVGKTTLLKTIMG--LLKPRSGTINLAGNLINSKSPDQR 63
Query: 76 ARKGILLAFQVPPEIEGVRILDFLIQVL-TEIKGMKPEEAYDVVLNKAKELWFDDKDMRR 134
L + + + + + L+ L K +K E + + + L K M
Sbjct: 64 RNGNWLCSSRKRYYSSSLTVKENLLLGLEARQKQVKKAEIPEEIFSLFPVL----KTMLS 119
Query: 135 FVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSVISRKIEE-LHNRGVSII 193
+ SGG++++L + +AL+ +P+LL+LDEP G+ + I + + G+S++
Sbjct: 120 RMGGDLSGGQQQQLAIARALMGQPQLLVLDEPTEGIQPSIILEIEAAVRRIIETTGISVL 179
Query: 194 LITHYGRIFGHIDKEKLKVHVMKDGKIVKSGGSEII--DMIER--EGFKAIFGGENVE 247
L+ + H ++ + M+ G IV SG ++ + D+I+R F + G E+++
Sbjct: 180 LVEQH----LHFVRQADYYYAMQKGAIVASGSTDELSQDVIQRFFGRFNSRRGAESIQ 233
>pir||B71030 probable ATP-binding transport protein - Pyrococcus horikoshii
>gi|3257959|dbj|BAA30642.1| (AP000006) 226aa long
hypothetical ATP-binding transport protein [Pyrococcus
horikoshii]
Length = 226
Score = 75.7 bits (183), Expect = 5e-13
Identities = 67/234 (28%), Positives = 114/234 (48%), Gaps = 27/234 (11%)
Query: 17 LRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKIIFNGEDITSSSPDERA 76
LRGI ++ +GE ++GPNG+GKST +A + T GK G D+ + + R
Sbjct: 4 LRGITFSIEEGEIFGLIGPNGAGKSTTLKILA--TLLRPTGGKAEVFGFDVVKEADEVRK 61
Query: 77 RKGILLAFQVPPE------IEGVRILDFLIQVLTEIKGMKPEEAYDVVLNKAKELWFDDK 130
L +P E + G+ L F+ ++ K + +L EL
Sbjct: 62 -----LISYLPEEAGAYKRLTGLEYLKFMAKLYA-----KDSRKAEKMLKLGIELSGLGD 111
Query: 131 DMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSVISRKIEELHNRGV 190
+R ++ +S G +RL L +AL+++PKL +LDEP SG+D+ + I R I E GV
Sbjct: 112 RLRDKIST-YSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRIIREFSKEGV 170
Query: 191 SIILITHYGRIFGHIDKEKL--KVHVMKDGKIVKSGG-SEIIDMIEREGFKAIF 241
+ ++ +H ++ E L +V ++ GKIV+ G E+ + + E + +F
Sbjct: 171 TFLISSH-----NMLEVEYLCDRVALIHKGKIVEVGSPHELKEKHKAENLEEVF 219
>pir||H71008 probable ATP-binding transport protein - Pyrococcus horikoshii
>gi|3257789|dbj|BAA30472.1| (AP000006) 308aa long
hypothetical ATP-binding transport protein [Pyrococcus
horikoshii]
Length = 308
Score = 75.3 bits (182), Expect = 6e-13
Identities = 67/240 (27%), Positives = 112/240 (45%), Gaps = 14/240 (5%)
Query: 2 LKIEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKII 61
+++E L + + ++ V++G +GPNG+GK+T L++ G G +
Sbjct: 4 IEVEKLTKSYGKFKAIDNLSFVVDEGIVFGFLGPNGAGKTTTILSMLGI--IIPDSGDVR 61
Query: 62 FNGEDITSSSPDERARKGILLA-FQVPPEIEGVRILDFLIQVLTEIKGMKPEEAYDVVLN 120
G DI + R G L + E+ R LDF K K + +++
Sbjct: 62 ILGYDIFKEPLKAKERLGFLPENATIYEELTAWRNLDFFASFYRMSKQEKEKRIEELL-- 119
Query: 121 KAKELWFDDKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSVISR 180
K LW D+R FS G R+RL L QAL+ +P+LL+LDEP SG+D + ++
Sbjct: 120 KLVGLW----DVRYRKAKTFSKGMRQRLLLAQALINDPELLILDEPTSGLDPEGARLVKD 175
Query: 181 KIEELHNRGVSIILITHYGRIFGHIDKEKLKVHVMKDGKIVKSGGSEII--DMIEREGFK 238
I E +G ++ +H I +++ KV ++ GK+ G E I +E EG++
Sbjct: 176 IIREQRKQGKTVFFSSH---ILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYE 232
>gb|AAF28101.1|AF148682_1 (AF148682) oligopeptide permease F protein [Brucella abortus]
Length = 243
Score = 75.3 bits (182), Expect = 6e-13
Identities = 68/234 (29%), Positives = 122/234 (52%), Gaps = 27/234 (11%)
Query: 20 INLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKIIFNGEDITSSSPDERA-RK 78
++L + +G+ I+G +GSGKSTL I + ++G+I + G+++ S RA R+
Sbjct: 10 VSLTLKEGQTIGIVGESGSGKSTLGRAIL---RLIESEGRIAYLGQELPRESQAMRAKRR 66
Query: 79 GILLAFQVP-----PEIEGVRILD--FLI---QVLTEIKGMKPEEAYDVVLNKAKELWFD 128
+ L FQ P P + RI+ LI Q+ + + + +EA +E+ D
Sbjct: 67 ELQLVFQDPFGSLSPRMTIGRIITEGLLIHEPQLSAKDRDRRAQEAL-------REVGMD 119
Query: 129 DKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSVISRKIEELH-N 187
R+ + FSGG+R+R+ + + ++L+P++++LDEP S +D I + +L +
Sbjct: 120 PAMRNRYPHE-FSGGQRQRIAIARTMILKPRVIVLDEPTSALDRSVQKQIVTLLRDLQKD 178
Query: 188 RGVSIILITHYGRIFGHIDKEKLKVHVMKDGKIVKSGGSE-IIDMIEREGFKAI 240
G+S + I+H + + V VMK+GKIV+ G +E + D E KA+
Sbjct: 179 HGLSYLFISHDMAVVRAVSD---YVIVMKNGKIVEQGDTEQVFDHPREEYTKAL 229
>gi|11499200 spermidine/putrescine ABC transporter, ATP-binding protein (potA)
[Archaeoglobus fulgidus] >gi|7445763|pir||G69450
spermidine/putrescine ABC transporter, ATP-binding
protein (potA) homolog - Archaeoglobus fulgidus
>gi|2648948|gb|AAB89638.1| (AE000991)
spermidine/putrescine ABC transporter, ATP-binding
protein (potA) [Archaeoglobus fulgidus]
Length = 345
Score = 74.5 bits (180), Expect = 1e-12
Identities = 68/252 (26%), Positives = 117/252 (45%), Gaps = 26/252 (10%)
Query: 2 LKIEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKII 61
+++E + + +L INL + GEF ++GP+GSGK+T+ IAG +G +
Sbjct: 6 VELEGISKSYDSTTVLEDINLRIQQGEFFSLLGPSGSGKTTIIRIIAG--LTFPDQGFVR 63
Query: 62 FNGEDITSSSPDERARKGILLAFQVPPEIEGVRILDFLIQVLTEIKGMKPEEAYDVVLNK 121
NGED TS P R+ + + FQ + + + + L ++ + E D V
Sbjct: 64 INGEDCTSLPP---YRRNVGMVFQNLALFPHLNVFENVAYGL-RLRKIPEGEIKDRVYRY 119
Query: 122 AKELWFDDKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSVISRK 181
+ + D + + SGG+++R+ + +AL+ EP +LLLDEP +D L +
Sbjct: 120 LELVNLDPEIYAKRKVEQLSGGQQQRVAIARALVTEPSILLLDEPLGALD---LKIRQHM 176
Query: 182 IEEL----HNRGVSIILITHYGRIFGHIDKEKL-----KVHVMKDGKIVKSGGSEIIDMI 232
I EL G + I +TH D+ + ++ V+ +G+I + G I
Sbjct: 177 ISELKRIQKTLGTTFIYVTH--------DQSEALLLSDRLAVLNEGRIHQIGTPREIYER 228
Query: 233 EREGFKAIFGGE 244
+ F A F GE
Sbjct: 229 PKTRFVASFIGE 240
>pir||A75184 ATP-binding transport protein PAB0434 - Pyrococcus abyssi (strain
Orsay) >gi|5458062|emb|CAB49552.1| (AJ248284)
ATP-BINDING TRANSPORT PROTEIN [Pyrococcus abyssi]
Length = 244
Score = 74.5 bits (180), Expect = 1e-12
Identities = 65/236 (27%), Positives = 116/236 (48%), Gaps = 31/236 (13%)
Query: 17 LRGINLAVNDGEFHVIMGPNGSGKSTLALTIAG--HPKYKVTKGKIIFNGEDITSSSPDE 74
LRG++ + +GE ++GPNG+GKST +A HP T G+ G D+ + +
Sbjct: 22 LRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHP----TGGRAEVFGHDVVKEASEV 77
Query: 75 RARKGILLAFQVPPE------IEGVRILDFLIQVLTEIKGMKPEEAYDVVLNKAKELWFD 128
R L +P E + G+ L+F+ ++ K + +L EL
Sbjct: 78 RK-----LISYLPEEAGAYKRLTGLEYLEFMAKLYA-----KDSRKAEKMLKLGIELSGL 127
Query: 129 DKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSVISRKIEELHNR 188
+ + V+ +S G +RL L +AL+++PKL +LDEP SG+D+ + I R I+E
Sbjct: 128 GERLNDKVST-YSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRTIKEFSKE 186
Query: 189 GVSIILITHYGRIFGHIDKEKL--KVHVMKDGKIVKSG-GSEIIDMIEREGFKAIF 241
GV+ ++ +H ++ E L +V ++ G+I++ G E+ + E + +F
Sbjct: 187 GVTFLISSH-----NMLEVEYLCDRVALIHKGRILEVGTPRELKERYNAENLEEVF 237
>gb|AAA20681.1| (L16958) Mdl1p [Saccharomyces cerevisiae]
Length = 696
Score = 73.4 bits (177), Expect = 2e-12
Identities = 60/238 (25%), Positives = 109/238 (45%), Gaps = 12/238 (5%)
Query: 15 EILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKIIFNGEDITSSSPDE 74
+I + +N+ + GE +GP+GSGKST+A + + Y V G I F EDI + +
Sbjct: 449 QIFKDLNITIKPGEHVCAVGPSGSGKSTIASLLLRY--YDVNSGSIEFGDEDIRNFNL-- 504
Query: 75 RARKGILLAFQVPPEIEGVRILDFLIQVLTEIKGMKPEEAYDVV--LNKAKELWFDDKDM 132
R + ++ Q P + ILD ++ + + + + N K L +
Sbjct: 505 RKYRRLIGYVQQEPLLFNGTILDNILYCIPPEIAEQDDRIRRAIGKANCTKFLANFPDGL 564
Query: 133 RRFVNVG---FSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSVISRKIEELHNRG 189
+ V SGG+++R+ L +A LL+P +L+LDE S +D S ++++ ++ RG
Sbjct: 565 QTMVGARGAQLSGGQKQRIALARAFLLDPAVLILDEATSALDSQSEEIVAKNLQRRVERG 624
Query: 190 VSIILITHYGRIFGHIDKEKLKVHVMKDGKIVKSGGSEIIDMIEREGFKAIFGGENVE 247
+ I I H H + + + K G +V++G + I A+ + E
Sbjct: 625 FTTISIAHRLSTIKHSTR---VIVLGKHGSVVETGSFRDLIAIPNSELNALLAEQQDE 679
>gi|6323217 ATP-binding cassette (ABC) transporter family member; Mdl1p
[Saccharomyces cerevisiae]
>gi|1346512|sp|P33310|MDL1_YEAST ATP-DEPENDENT PERMEASE
MDL1 >gi|1078101|pir||S51433 MDL1 protein - yeast
(Saccharomyces cerevisiae) >gi|577195|gb|AAB67455.1|
(U17246) Mdl1p [Saccharomyces cerevisiae]
Length = 695
Score = 73.4 bits (177), Expect = 2e-12
Identities = 60/238 (25%), Positives = 109/238 (45%), Gaps = 12/238 (5%)
Query: 15 EILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKIIFNGEDITSSSPDE 74
+I + +N+ + GE +GP+GSGKST+A + + Y V G I F EDI + +
Sbjct: 448 QIFKDLNITIKPGEHVCAVGPSGSGKSTIASLLLRY--YDVNSGSIEFGDEDIRNFNL-- 503
Query: 75 RARKGILLAFQVPPEIEGVRILDFLIQVLTEIKGMKPEEAYDVV--LNKAKELWFDDKDM 132
R + ++ Q P + ILD ++ + + + + N K L +
Sbjct: 504 RKYRRLIGYVQQEPLLFNGTILDNILYCIPPEIAEQDDRIRRAIGKANCTKFLANFPDGL 563
Query: 133 RRFVNVG---FSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSVISRKIEELHNRG 189
+ V SGG+++R+ L +A LL+P +L+LDE S +D S ++++ ++ RG
Sbjct: 564 QTMVGARGAQLSGGQKQRIALARAFLLDPAVLILDEATSALDSQSEEIVAKNLQRRVERG 623
Query: 190 VSIILITHYGRIFGHIDKEKLKVHVMKDGKIVKSGGSEIIDMIEREGFKAIFGGENVE 247
+ I I H H + + + K G +V++G + I A+ + E
Sbjct: 624 FTTISIAHRLSTIKHSTR---VIVLGKHGSVVETGSFRDLIAIPNSELNALLAEQQDE 678
>gb|AAB95372.1| (U75349) putative ABC transporter BitD [Brachyspira hyodysenteriae]
Length = 374
Score = 73.4 bits (177), Expect = 2e-12
Identities = 62/251 (24%), Positives = 124/251 (48%), Gaps = 24/251 (9%)
Query: 2 LKIEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKII 61
+ IE++ E I+ ++L + +GEF ++GP+G GK+TL IAG + +G I
Sbjct: 5 ISIENVVKRYEKLTIIPDLSLEIKNGEFFTLLGPSGCGKTTLLRMIAG---FNTIEGGEI 61
Query: 62 FNGEDITSSSPDERARKGILLA-FQVPPEIEGVRILDFLIQVLTEIKGMKPEEAYDVVLN 120
+D+ ++ P + G++ + + P + +++ +++ E K ++ D +L+
Sbjct: 62 KFDKDVINNIPAHKRNIGMVFQNYAIFPHMTVRENVEYGLKLRKENKESMKKKV-DEMLH 120
Query: 121 KAKELWFDDKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSVISR 180
K + D+ R SGG+++R+ L +A+++ P +LL+DEP S +D +
Sbjct: 121 VVKIEEYQDRLPER-----LSGGQQQRVALARAIVITPSVLLMDEPLSNLDAKLRIEMRS 175
Query: 181 KIEELHNR-GVSIILITHYGRIFGHIDKEKL-----KVHVMKDGKIVKSGGSEIIDMIER 234
I+++ G++ + +TH D+E+ ++ VMK+G I + G I
Sbjct: 176 AIKDIQRHVGITTVYVTH--------DQEEALAVSDRIAVMKNGVIQQVGSPVSIYTRPY 227
Query: 235 EGFKAIFGGEN 245
F A F G +
Sbjct: 228 NVFVATFIGHS 238
>pir||E72364 ABC transporter, ATP-binding protein - Thermotoga maritima (strain
MSB8) >gi|4981058|gb|AAD35629.1|AE001729_9 (AE001729)
ABC transporter, ATP-binding protein [Thermotoga
maritima]
Length = 244
Score = 73.4 bits (177), Expect = 2e-12
Identities = 61/248 (24%), Positives = 130/248 (51%), Gaps = 26/248 (10%)
Query: 4 IEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKIIFN 63
++DL + +EIL+GI+ + +GE ++GPNG+GK+T I+ K + G +
Sbjct: 6 VKDLRKRIGKKEILKGISFEIEEGEIFGLIGPNGAGKTTTLRIIS--TLIKPSSGIVTVF 63
Query: 64 GEDITSSSPDERARKGILLAFQVPPEIEGVRILDFLIQVLTEIKGMKPEEAYDV--VLNK 121
G+++ + R L +P E R + I+ L + G + ++ ++ +
Sbjct: 64 GKNVVEEPHEVRK-----LISYLPEEAGAYRNMQG-IEYLRFVAGFYASSSSEIEEMVER 117
Query: 122 AKELWFDDKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSVISRK 181
A E+ + ++ V+ +S G ++L + +AL++ P+L +LDEP SG+DV + + +
Sbjct: 118 ATEIAGLGEKIKDRVST-YSKGMVRKLLIARALMVNPRLAILDEPTSGLDVLNAREVRKI 176
Query: 182 IEELHNRGVSIILITHYGRIFGHIDKEKL--KVHVMKDGKIVKSGGSEIIDMIEREGFKA 239
+++ G++I++ +H ++ E L ++ ++ +G IV++G E + +E +KA
Sbjct: 177 LKQASQEGLTILVSSH-----NMLEVEFLCDRIALIHNGTIVETGTVEEL----KERYKA 227
Query: 240 IFGGENVE 247
+N+E
Sbjct: 228 ----QNIE 231
>pir||D72484 probable ATP-binding protein APE2516 - Aeropyrum pernix (strain
K1) >gi|5106221|dbj|BAA81532.1| (AP000064) 323aa long
hypothetical ATP-binding protein [Aeropyrum pernix]
Length = 323
Score = 73.4 bits (177), Expect = 2e-12
Identities = 63/238 (26%), Positives = 113/238 (47%), Gaps = 33/238 (13%)
Query: 17 LRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKIIFNGEDITSSSPDERA 76
L G++L V G ++GPNG+GK+TL ++ G G D+ + + R+
Sbjct: 29 LDGVDLKVGRGTLFSLLGPNGAGKTTLVKILS--TLLLPDSGWARVAGFDVVREANNVRS 86
Query: 77 RKGILLAFQVPPEIEGVRILDFLIQ------VLTEIKGMKPEEAYDVVLNKAKELWFDDK 130
R G++L G R L + + +++ G+ P EA V + + ++
Sbjct: 87 RIGVVLG--------GERALYWRLSGWDNLWFFSQLYGIPPREAKRRVKELLEIVGLEEW 138
Query: 131 DMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSVISRKIEELHNRGV 190
R N +S G ++RL + + L+ +P++LLLDEP G+D + + I + G
Sbjct: 139 AHVRVEN--YSKGMKQRLHIARGLINDPEVLLLDEPTIGLDPKAAREVRSIIRRIVREGR 196
Query: 191 SIILITHYGRIFGHIDKEKL--KVHVMKDGKIVKSGGSEIIDMIEREGFKAIFGGENV 246
+++L THY ++ E+L +V ++ G+IV G E K++ GGE+V
Sbjct: 197 TVLLTTHY-----MVEAEELSDRVAIISKGRIVAEG--------PPEDLKSLVGGESV 241
>gb|AAK43114.1| ABC transporter, ATP binding protein [Sulfolobus solfataricus]
Length = 863
Score = 73.0 bits (176), Expect = 3e-12
Identities = 66/252 (26%), Positives = 120/252 (47%), Gaps = 46/252 (18%)
Query: 16 ILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKIIFNGEDITSSSPDER 75
+++ IN+ + GE I+G +GSGKST+A + Y V +G+I+ +G DI +
Sbjct: 467 VIKDINIGIKPGEKVAIVGKSGSGKSTIAKLLLRF--YDVNEGRILIDGIDIREIDLNYL 524
Query: 76 ARK-----------GILLAFQVPPEIEGVRILDFL-----IQVLTEIKGMKPEEAYDVVL 119
RK + + V + V +D + ++ EI +K AYD +L
Sbjct: 525 RRKVAYVPQDVVLFDTTVGYNVAYGTDNVSEIDIIRACKIAKIHDEI--VKLPFAYDTIL 582
Query: 120 NKAKELWFDDKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSVIS 179
+ SGG+R+RL + +A++ P +L+ DE S +DV S +
Sbjct: 583 GER--------------GTYLSGGQRQRLSIARAIIKNPDVLIFDEATSNLDVTSEREVY 628
Query: 180 RKIEELHNRGVSIILITHYGRIFGHIDKEKLKVHVMKDGKIVKSGGSEIIDMIEREG--- 236
+ ++ ++G ++I+ITH + D KV V+ +GK+V+ G + I+++ ++G
Sbjct: 629 ETMIDV-SKGKTVIMITHNVHEVMNSD----KVIVLSNGKVVEEG--KPIELLNKKGEFY 681
Query: 237 --FKAIFGGENV 246
FK EN+
Sbjct: 682 KMFKEQINEENI 693
>pir||A75083 ATP-binding transport protein PAB1668 - Pyrococcus abyssi (strain
Orsay) >gi|5458478|emb|CAB49966.1| (AJ248286)
ATP-BINDING TRANSPORT PROTEIN [Pyrococcus abyssi]
Length = 315
Score = 73.0 bits (176), Expect = 3e-12
Identities = 63/231 (27%), Positives = 113/231 (48%), Gaps = 18/231 (7%)
Query: 14 REILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKIIFNGEDITSSSPD 73
R ++ +NL V G + +GPNG+GK+T + G K T G+I G ++ P
Sbjct: 18 RNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTG--ALKPTYGEIKIIGMEM----PR 71
Query: 74 ERAR--KGILLAFQVPPEIEGVRILDFLIQVLTEIKGMKPEEAYDVVLNKAKELWFDDKD 131
ER + + + + P + + I +FL+ + + G+ ++A +N+A+EL
Sbjct: 72 ERVKIMRNVGYMPERPLAYDDMTIFEFLVY-MGRLLGLPKDKA----VNQARELMAYTGV 126
Query: 132 MRRFVNV--GFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSVISRKIEELHNRG 189
R N S G+R+R+ AL+ +P+LL+LDEP S +D KI EL G
Sbjct: 127 GRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRMEFIGKILELAKSG 186
Query: 190 VSIILITHYGRIFGHIDKEKLKVHVMKDGKIVKSGGSEIIDMIEREGFKAI 240
++ + +H I I++ V ++KDG++++ G + IE + +
Sbjct: 187 KTVFISSH---IVSEIERMCNYVGLIKDGQLIEQGKVRDLAKIESTDYDVV 234
>dbj|BAB07160.1| (AP001518) L-arabinose ABC transporter (ATP-binding protein)
[Bacillus halodurans]
Length = 517
Score = 73.0 bits (176), Expect = 3e-12
Identities = 53/244 (21%), Positives = 115/244 (46%), Gaps = 7/244 (2%)
Query: 1 MLKIEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKI 60
+L++ ++ G + L +NL V GE H ++G NG+GKSTL ++G + +G I
Sbjct: 7 LLEMRNITKAFPGVKALNNVNLKVEQGEIHALVGENGAGKSTLMKVLSGVYPHGTYEGDI 66
Query: 61 IFNGEDITSSSPDERARKGILLAFQVPPEIEGVRILDFLIQVLTEIKG--MKPEEAYDVV 118
+F G E + GI++ Q + + I + + + K + +
Sbjct: 67 LFEGRVCQFKDIKESEQLGIVIIHQELALVPELSIAENIFLGNEQAKNGVIDWNQTITEA 126
Query: 119 LNKAKELWFDDKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSVI 178
K++ D +N+G G+++ +E+ +AL + KLL+LDEP + ++ + +
Sbjct: 127 AKLLKKVGLSDSPRTLAMNIGV--GKQQLVEIAKALSKKVKLLILDEPTAALNEEDSQNL 184
Query: 179 SRKIEELHNRGVSIILITHYGRIFGHIDKEKLKVHVMKDGKIVKSGGSEIIDMIEREGFK 238
+ E +G++ I+I+H ++ + +++DG+ +++ + ++ E K
Sbjct: 185 LHLLLEFKKQGMTSIIISHKLNEISYVADH---LTILRDGQSIETLSLQSGEVTEDRIIK 241
Query: 239 AIFG 242
+ G
Sbjct: 242 GMVG 245
>gb|AAB88581.1| (M93437) CycB [Thermus thermophilus]
Length = 264
Score = 72.6 bits (175), Expect = 4e-12
Identities = 69/231 (29%), Positives = 116/231 (49%), Gaps = 26/231 (11%)
Query: 20 INLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKIIFNGEDITSSSPDERARKG 79
+ L+V +GE ++GP+GSGKSTL +AG + +G + F GED+ + P ER + G
Sbjct: 43 VALSVAEGETLALLGPSGSGKSTLLRLVAG--LLRPDRGFVRFLGEDL-NPLPPERRKVG 99
Query: 80 ILLAFQVPPEIEGVRILDFLIQVLTEIKGMKPEEAYDVVLNKAKELWFDDKDMRRFVNVG 139
L FQ + + + + L E G E +L + + K +
Sbjct: 100 FL--FQDYALFPHLTVEENVAFGLVEAAGQGRRERVRELLKRMELTPHARKRPQEL---- 153
Query: 140 FSGGERKRLELLQALLLEPKLLLLDEPDSGVDV----DSLSVISRKIEELHNRGVSIILI 195
SGGE++R+ L +AL P+LLLLDEP +D+ + L + R ++E GV+ +L+
Sbjct: 154 -SGGEQQRVALARALAPRPRLLLLDEPLGALDLRLREELLFFLRRTLKE---EGVTTLLV 209
Query: 196 TH-YGRIF--GHIDKEKLKVHVMKDGKIVKSGGSEIIDMIEREGFKAIFGG 243
TH G F H +V ++++G++V+ G E + ++ + A F G
Sbjct: 210 THDQGEAFLLAH------RVALLREGRLVQVGRPEEVYARPKDPWAARFLG 254
>pir||G75169 abc transporter ATP-binding protein PAB0350 - Pyrococcus abyssi
(strain Orsay) >gi|5457948|emb|CAB49438.1| (AJ248284)
ABC TRANSPORTER ATP-BINDING PROTEIN [Pyrococcus abyssi]
Length = 260
Score = 72.6 bits (175), Expect = 4e-12
Identities = 72/266 (27%), Positives = 128/266 (48%), Gaps = 41/266 (15%)
Query: 1 MLKIEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAG-HPKYKVTKGK 59
+++ E+L + + + + G+ + GE +++GPNG+GK+TL +AG H Y +GK
Sbjct: 4 VIEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNY---QGK 60
Query: 60 IIFNGEDITSSSPDERARK------GILLAFQVPPEIEGVRILDFLIQVLTEIKGMKPEE 113
I+ G+ SP E K L F+VP + +LD + KG+
Sbjct: 61 ILVFGK-----SPSEVREKVAYVPQTFSLNFRVP-----LSVLDVVSMGGLYKKGLIHFN 110
Query: 114 AYDVVLNKAKELWFDDKDMRRFVNVGF---SGGERKRLELLQALLLEPKLLLLDEPDSGV 170
V+ + E+ D ++ F SGG+++R+ + +AL+ P+LLLLDEP S +
Sbjct: 111 IPQEVIKRGLEI-LDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSAL 169
Query: 171 D----VDSLSVISRKIEELHNRGVSIILITHYGRIFGHIDKEKLKVHVMKDGKIVKSGG- 225
D +++ S +S+ E++ G+++I+ TH I + + + D K+V G
Sbjct: 170 DPKARIEATSTLSKIKEDM---GITMIITTHDVNPLIEIGDKVMLI----DRKLVAFGSP 222
Query: 226 -----SEIIDMIEREGFKAIFGGENV 246
EII + KA+ GE +
Sbjct: 223 EEVLRDEIIGKVYGPASKAVRVGERL 248
>dbj|BAA85884.1| (AB033988) unnamed protein product [Shewanella violacea]
Length = 196
Score = 72.6 bits (175), Expect = 4e-12
Identities = 54/198 (27%), Positives = 103/198 (51%), Gaps = 14/198 (7%)
Query: 50 HPKYKVTKGKIIFNGEDITSSSPDERARKGILLAFQVPPEIEGVRILDFLIQVL---TEI 106
HP V + +I+ + +D+T RARKGI Q + + D ++ VL ++I
Sbjct: 6 HPS-SVHRLEILIDDDDLTLDPMHLRARKGIGYLPQEASIFRKLSVRDNIMAVLQTRSDI 64
Query: 107 KGMKPEEAYDVVLNKAKELWFDDKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEP 166
EE + +L + F+ +R + SGGER+R+E+ +AL PK +LLDEP
Sbjct: 65 DNNAREEQLENLLEE-----FNITHIRDSQGMALSGGERRRVEIARALAANPKFILLDEP 119
Query: 167 DSGVDVDSLSVISRKIEELHNRGVSIILITHYGRIFGHIDKEKLKVHVMKDGKIVKSGGS 226
+GVD S+ I + I++L +RG+ +++ H R + + + +++ G ++ G
Sbjct: 120 FAGVDPISVIDIKKIIQQLKSRGLGVLITDHNVRETLDVCE---RAYIVSHGNLIAEGTP 176
Query: 227 EIIDMIEREGFKAIFGGE 244
++++ + +A++ GE
Sbjct: 177 --AEIMDNQQVRAVYLGE 192
>pir||G81409 probable phosphate transport ATP-binding protein Cj0616 [imported]
- Campylobacter jejuni (strain NCTC 11168)
>gi|6968083|emb|CAB75252.1| (AL139075) putative
phosphate transport ATP-binding protein [Campylobacter
jejuni]
Length = 246
Score = 72.6 bits (175), Expect = 4e-12
Identities = 67/246 (27%), Positives = 122/246 (49%), Gaps = 11/246 (4%)
Query: 3 KIEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTK--GKI 60
K +L++ ++ L IN+ + + ++G +G GKST L K+ K G +
Sbjct: 4 KTTNLNLFYGKKQALFDINMQIEQNKITALIGASGCGKSTF-LRCFNRMNDKIAKIDGLV 62
Query: 61 IFNGEDITSSSPDERARKGILLAFQVPPE-IEGV-RILDFLIQVLTEIKGMKPEEAYDVV 118
G+D+ + RK + + FQ P ++ + + + ++ IK EEA V
Sbjct: 63 EIKGKDVKNQDV-VALRKNVGMVFQQPNVFVKSIYENISYAPKLHGMIKNKDEEEALVVD 121
Query: 119 LNKAKELWFDDKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSVI 178
+ L+ + KD + + SGG+++RL + +AL ++PKLLLLDEP S +D S VI
Sbjct: 122 CLQKVGLFEEVKDKLKQNALALSGGQQQRLCIARALAIKPKLLLLDEPTSALDPISSGVI 181
Query: 179 SRKIEELHNRGVSIILITHYGRIFGHIDKEKLKVHVMKDGKIVKSGGS-EIIDMIEREGF 237
++EL + +S+I++TH + + H+ G++++ G S E + ++E
Sbjct: 182 EELLKEL-SHNLSMIMVTHNMQQGKRVADYTAFFHL---GELIEFGESKEFFENPKQEKT 237
Query: 238 KAIFGG 243
KA G
Sbjct: 238 KAYLSG 243
>gb|AAK42548.1| ABC transporter, ATP binding protein [Sulfolobus solfataricus]
Length = 248
Score = 71.8 bits (173), Expect = 7e-12
Identities = 76/262 (29%), Positives = 125/262 (47%), Gaps = 42/262 (16%)
Query: 2 LKIEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKII 61
+ + +L + +EIL+G++ V GE I+GPNG+GK+T +AG K
Sbjct: 10 VSVTNLRKRIGNKEILKGLSFDVESGEVFGIVGPNGAGKTTTLRILAGIIKN-------- 61
Query: 62 FNGE-DITSSSPDERARKGILL-----AFQVPPEIEGVRILDFLIQVLTEIKGMKP-EEA 114
FNG+ + P E + G + AF ++ G LDF ++ KG K +E
Sbjct: 62 FNGDAKVFGLRPIEAKQNGYISYMPEDAFPY-EKLTGYENLDFYAELYA--KGDKELKEK 118
Query: 115 Y---DVVLNKAKELWFDDKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVD 171
Y + + E +D +S G ++RL + + L++ PKL +LDEP S +D
Sbjct: 119 YLKLGIEIANLGERIYDK-------TAEYSRGMKRRLIIARTLMVMPKLSVLDEPTSALD 171
Query: 172 VDSLSVISRKIEELHNR-GVSIILITHYGRIFGHIDKEKL--KVHVMKDGKIVKSG-GSE 227
V+S I I E+ R ++IIL +H ++ E L ++ ++ DG+IV +G E
Sbjct: 172 VESAVRIRNIILEMARRYNMTIILSSH-----NMLEVEYLCDRITLINDGRIVANGKPKE 226
Query: 228 IIDM-----IEREGFKAIFGGE 244
II +E K +FG +
Sbjct: 227 IIKSTNSKNLEEAFIKLVFGDQ 248
>gi|10955070 agtA [Agrobacterium tumefaciens]
>gi|6689864|gb|AAF23877.1|AF117204_2 (AF242881) agtA
[Agrobacterium tumefaciens]
Length = 359
Score = 71.8 bits (173), Expect = 7e-12
Identities = 53/227 (23%), Positives = 110/227 (48%), Gaps = 14/227 (6%)
Query: 20 INLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKIIFNGEDITSSSPDERARKG 79
++L ++ GEF ++G +GSGK+TL +AG +G+++ +G ++ P +R
Sbjct: 27 VSLDISQGEFFALLGSSGSGKTTLLTLLAGFDN--PNEGQVLMSGVSVSDVPPHKRQIGV 84
Query: 80 ILLAFQVPPEIEGVRILDFLIQVLTEIKGMKPEEAYDVVLNKAKELWFDDKDMRRFVNVG 139
+ + + P + + + +++ +G+ E + V KA + D +
Sbjct: 85 VFQNYALFPHLTAAENVAYPLRM----RGVARHEREERV--KAALALVNLSDRLGAYPIQ 138
Query: 140 FSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSVISRKIEEL-HNRGVSIILITH- 197
SGG+++R+ L +AL+ P +LL+DEP +D + ++++ + H G+++I +TH
Sbjct: 139 LSGGQQQRVALARALVFSPAILLMDEPLGALDRRLRDQMQQELKRIQHELGITVIYVTHD 198
Query: 198 YGRIFGHIDKEKLKVHVMKDGKIVKSGGSEIIDMIEREGFKAIFGGE 244
D ++ +M G++++ E I F A F GE
Sbjct: 199 QSEAMAMAD----RIGIMSAGRLLQVADPEAIYAAPSSHFVARFIGE 241
>pir||H82440 ABC transporter, ATP-binding protein VCA0602 [imported] - Vibrio
cholerae (group O1 strain N16961)
>gi|9658013|gb|AAF96503.1| (AE004390) ABC transporter,
ATP-binding protein [Vibrio cholerae]
Length = 403
Score = 71.8 bits (173), Expect = 7e-12
Identities = 68/236 (28%), Positives = 112/236 (46%), Gaps = 28/236 (11%)
Query: 17 LRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKIIFNGEDITSSSPDERA 76
L+ I+L++ GEF +GP+G GK+TL IAG T G I N + IT P++R
Sbjct: 50 LKEISLSIEKGEFVCFLGPSGCGKTTLLRAIAGLDL--PTSGTIHQNQQAITFLPPEQRD 107
Query: 77 RKGILLAFQVPPEIEGVRILDFLIQVLTEIKGMKPEEAYDVVLNKAKELWFDDKDMRRFV 136
+ ++ + P + ++ I + +GM +A + V E W + +
Sbjct: 108 FGIVFQSYALFPNLT----VEENIAIGLRNQGMSVRDALEKV-----EQWLEMIGLATSA 158
Query: 137 NV---GFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSVISRKIEELHNR-GVSI 192
SGG+++R+ L +AL L P LLLLDEP S +D + + +I +L + G++
Sbjct: 159 QKYPSQLSGGQQQRVALARALALSPGLLLLDEPLSALDAKVRTHLREEICQLQRKLGITT 218
Query: 193 ILITHYGRIFGHIDKEKL-----KVHVMKDGKIVKSGGSEIIDMIEREGFKAIFGG 243
I++TH D+E+ ++ VM G I + G + I F A F G
Sbjct: 219 IMVTH--------DQEEALTMADRIVVMNHGVIEQVGTPQEIYQKPASRFVAEFVG 266
>pir||H72690 probable spermidine/putrescine transport ATP-binding protein
APE0944 - Aeropyrum pernix (strain K1)
>gi|5104613|dbj|BAA79928.1| (AP000060) 325aa long
hypothetical spermidine/putrescine transport ATP-binding
protein [Aeropyrum pernix]
Length = 325
Score = 71.4 bits (172), Expect = 1e-11
Identities = 66/255 (25%), Positives = 110/255 (42%), Gaps = 52/255 (20%)
Query: 15 EILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKIIFNGEDITSSSPDE 74
E LRG++ + + ++GP+G GK+T+ IAG K +G++ F G D T P+
Sbjct: 2 EALRGVSFSFPESSITAVLGPSGCGKTTMLKVIAG--LLKPRRGRVFFGGVDYTGLPPER 59
Query: 75 RARKGILLAFQVPPEIEGVRILDFLIQVLTEIKGMKPEEAYDVVLNKAKELWFDDKDMRR 134
R+ + F+ Q L M YD V + F ++RR
Sbjct: 60 RS-------------------VGFVFQDLALFPHMT---VYDNVAFGLRARGFSGGEVRR 97
Query: 135 FVN-------------------VGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSL 175
V G SGG+++R+ L +A+ EP +LLLDEP S +D
Sbjct: 98 QVEWALETVGLTPPREFMGRRVTGLSGGQQQRVALARAIAYEPPVLLLDEPLSHLDFKIR 157
Query: 176 SVISRKIEELHNR-GVSIILITHYGRIFGHIDKEKL--KVHVMKDGKIVKSG-GSEIIDM 231
+ +++ L + G ++I +TH + +L + +M+DG+IV+ G SE+
Sbjct: 158 QRLLAELKRLQRKLGSTMIYVTH-----DQWEAMELADTLVIMRDGRIVQHGTPSEVYTR 212
Query: 232 IEREGFKAIFGGENV 246
FG N+
Sbjct: 213 PANVYVATFFGDANI 227
>sp|P39326|YTFR_ECOLI HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PROTEIN IN PPA-FBP
INTERGENIC REGION >gi|1361180|pir||S56454 hypothetical
ABC transporter (ppa-fbp intergenic region) -
Escherichia coli >gi|537070|gb|AAA97125.1| (U14003)
ORF_o417a [Escherichia coli] >gi|1790675|gb|AAC77185.1|
(AE000494) putative ATP-binding component of a transport
system [Escherichia coli K12]
Length = 417
Score = 71.4 bits (172), Expect = 1e-11
Identities = 60/246 (24%), Positives = 118/246 (47%), Gaps = 11/246 (4%)
Query: 1 MLKIEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKI 60
+L+ E L G + L ++ ++ GE ++G NG+GKSTL + G Y +G I
Sbjct: 9 ILRTEGLSKFFPGVKALDNVDFSLRRGEIMALLGENGAGKSTLIKALTG--VYHADRGTI 66
Query: 61 IFNGEDITSSSPDERARKGILLAFQVPPEIEGVRILDFLIQVLTEIK--GMKPEEAYDVV 118
G+ I+ + + GI +Q + + + D L + E K G+ + +
Sbjct: 67 WLEGQAISPKNTAHAQQLGIGTVYQEVNLLPNMSVADNLF-IGREPKRFGLLRRKEMEKR 125
Query: 119 LNKAKELWFDDKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSVI 178
+ + D+R +N FS ++ + + +A+ L K+L+LDEP + +D + ++
Sbjct: 126 ATELMASYGFSLDVREPLN-RFSVAMQQIVAICRAIDLSAKVLILDEPTASLDTQEVELL 184
Query: 179 SRKIEELHNRGVSIILITHYGRIFGHIDKEKLKVHVMKDGKIVKSGGSEIIDMIEREGFK 238
+ +L +RGVS+I +TH+ + + ++ V+++G V G E ++ + E K
Sbjct: 185 FDLMRQLRDRGVSLIFVTHF---LDQVYQVSDRITVLRNGSFV--GCRETCELPQIELVK 239
Query: 239 AIFGGE 244
+ G E
Sbjct: 240 MMLGRE 245
>pir||D70184 probable ribose/galactose ABC transporter mglA - Lyme disease
spirochete >gi|2688601|gb|AAC67018.1| (AE001168)
ribose/galactose ABC transporter, ATP-binding protein
(mglA) [Borrelia burgdorferi]
Length = 536
Score = 71.4 bits (172), Expect = 1e-11
Identities = 60/228 (26%), Positives = 109/228 (47%), Gaps = 13/228 (5%)
Query: 20 INLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKIIFNGEDITSSSPDERARKG 79
+++ GE H I+G NG+GK+TL TI G ++V G+II G++I E R G
Sbjct: 24 VSIKFKAGEVHAILGENGAGKTTLMKTIYG--IHQVNSGRIILKGQEINFKDSSEAIRNG 81
Query: 80 ILLAFQ---VPPEIEGVRILDFLIQVLTEIKGMKPEEAYDVVLNKAKELWFDDKDMRRFV 136
I + FQ + P+ V+ + ++ G + ++ E + D+ + V
Sbjct: 82 IGMVFQHFMLIPQFTAVQ--NIILGYENSKFGFLDYKQARKKISSLSEKYGLKIDLEKRV 139
Query: 137 NVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSVISRKIEELHNRGVSIILIT 196
S G +++E+L+ L +++ DEP + + + ++ L G ++ILIT
Sbjct: 140 E-DLSVGMEQKIEILKVLYRNADIIIFDEPTAVLAPSEVDDFINILKVLAQEGHTVILIT 198
Query: 197 HYGRIFGHIDKEKLKVHVMKDGKIVKSGGSEIIDMIEREGFKAIFGGE 244
H + I K K +M+ GK+VK+ I D+ +++ K + G E
Sbjct: 199 HKIKEIRSIAK---KCTIMRLGKVVKT--VNIADIDDKDLTKLMIGKE 241
>pir||C81179 spermidine/putrescine ABC transporter, ATP-binding protein NMB0610
[imported] - Neisseria meningitidis (group B strain
MD58) >gi|7225840|gb|AAF41037.1| (AE002416)
spermidine/putrescine ABC transporter, ATP-binding
protein [Neisseria meningitidis MC58]
Length = 419
Score = 71.4 bits (172), Expect = 1e-11
Identities = 66/252 (26%), Positives = 114/252 (45%), Gaps = 28/252 (11%)
Query: 2 LKIEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKII 61
LKI+ L + + I+L + E ++G +GSGKSTL +AG +GKII
Sbjct: 58 LKIQGLVKKFGDNYAVDNIDLDIYQHEIFALLGSSGSGKSTLLRMLAGMES--PNQGKII 115
Query: 62 FNGEDITSSSPDERARKGILLAFQVPPEIEGVRILDFLIQVLTEIKGMKPEEAYDVVLNK 121
+G+DIT +P +R + ++ + P + + + F G+K ++ +
Sbjct: 116 LDGQDITKLAPYDRPINMMFQSYALFPHMTVEQNIAF---------GLKQDKMPKGEIAA 166
Query: 122 AKELWFDDKDMRRFVNVG---FSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSVI 178
E M +F SGG+++R+ L ++L PK+LLLDEP +D
Sbjct: 167 RVEEMLRLVQMTKFAKRKPHQLSGGQQQRIALARSLAKRPKILLLDEPLGALDKKLRQQT 226
Query: 179 SRK-IEELHNRGVSIILITHYGRIFGHIDKEK-----LKVHVMKDGKIVKSGGSEIIDMI 232
+ + L GV+ I++TH D+E+ ++ +M DG++ + G +
Sbjct: 227 QLELVNTLEQVGVTCIMVTH--------DQEEAMTMATRIAIMSDGQLQQVGTPSDVYDY 278
Query: 233 EREGFKAIFGGE 244
F A F GE
Sbjct: 279 PNSRFTAEFIGE 290
>gb|AAF50837.1| (AE003568) CG1718 gene product [Drosophila melanogaster]
Length = 1713
Score = 71.4 bits (172), Expect = 1e-11
Identities = 58/245 (23%), Positives = 115/245 (46%), Gaps = 11/245 (4%)
Query: 2 LKIEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKII 61
L++ L + +++G+++ + + E V++G NG+GK+T + G + T G I
Sbjct: 516 LQMRHLKKRFGNKMVVKGLSMNMFEDEITVLLGHNGAGKTTTISMLTG--MFPPTSGTAI 573
Query: 62 FNGEDITSSSPDERARKGILLAFQVPPEIEGVRILDFLIQVLTEIKGMKPEEAYDVVLNK 121
NG DI ++ R GI V + V I+ + +KG++ + V
Sbjct: 574 INGSDIRTNIEGARMSLGICPQHNVLFDEMSV---SNHIRFFSRMKGLRGKAVEQEVAKY 630
Query: 122 AKELWFDDKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSVISRK 181
K + +DK + SGG +++L + AL + K++L DEP SG+D + +
Sbjct: 631 LKMIELEDK--ANVASSKLSGGMKRKLSVCCALCGDTKVVLCDEPSSGMDPSARRQLWDL 688
Query: 182 IEELHNRGVSIILITHYGRIFGHIDKEKLKVHVMKDGKIVKSGGSEIIDMIEREGFKAIF 241
+++ G +++L TH+ D ++ +M DG++ G S + G++ +
Sbjct: 689 LQQ-EKVGRTLLLTTHF---MDEADVLGDRIAIMCDGELKCQGTSFFLKKQYGSGYRLVS 744
Query: 242 GGENV 246
G +N+
Sbjct: 745 GVQNL 749
>gb|AAB61163.1| (U77778) putative ABC transporter subunit [Staphylococcus
epidermidis] >gi|1586615|prf||2204285A epiF gene
[Staphylococcus epidermidis]
Length = 231
Score = 71.0 bits (171), Expect = 1e-11
Identities = 67/244 (27%), Positives = 115/244 (46%), Gaps = 19/244 (7%)
Query: 2 LKIEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKII 61
++ +L+ + IL+ INL V E + ++G NG+GKSTL I G T G I
Sbjct: 6 IETRNLNKRFKKETILKDINLKVYPNEVYGLLGINGAGKSTLMKIICGI--LPQTSGDIY 63
Query: 62 FNGEDITSSSPDERARKGILLAFQVPPEIEGVRILDFLIQVLTEIKGMKPEEAYDV-VLN 120
+G +T E G L+ + PP + D +K + E D ++
Sbjct: 64 LDGSPLTRK---ELTNIGSLI--ESPPTYNHLSAQD-------NLKVVALNENIDFNEIS 111
Query: 121 KAKELWFDDKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSVISR 180
K EL + + ++ V FS G ++RL + AL+ +PKLL+LDEP +G+D + +
Sbjct: 112 KVLELVNLNVEPQKKVK-NFSLGMKQRLGIAMALIKKPKLLVLDEPSNGLDPYGIQELRE 170
Query: 181 KIEELHNRGVSIILITHYGRIFGHIDKEKLKVHVMKDGKIVKSGGSEIIDMIEREGFKAI 240
++ L N S+I+ +H I I + V ++ +GK+ ++ + +E F
Sbjct: 171 LLKSLTNLNTSVIISSH---ILSEIQQLADHVGIIHNGKLEYQEENKTDENLEDVFFNIT 227
Query: 241 FGGE 244
GG+
Sbjct: 228 KGGK 231
>pir||D81303 branched-chain amino-acid ABC transport system ATP-binding protein
Cj1015c [imported] - Campylobacter jejuni (strain NCTC
11168) >gi|6968451|emb|CAB73271.1| (AL139077)
branched-chain amino-acid ABC transport system
ATP-binding protein [Campylobacter jejuni]
Length = 256
Score = 71.0 bits (171), Expect = 1e-11
Identities = 63/260 (24%), Positives = 121/260 (46%), Gaps = 26/260 (10%)
Query: 1 MLKIEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKI 60
+L+++ + + + + +N+GE ++GPNG+GK+TL I G+ YK + G +
Sbjct: 2 ILELKQISKSFGSVKAINETSFKINEGEIFALIGPNGAGKTTLFNIITGN--YKPSSGSV 59
Query: 61 IFNGEDITSSSPDERARKGILLAFQVPPEIEGVRILDFLIQVLTEIKGMKPEEAYDVVLN 120
F GE I P + GI FQ I ++ L VL ++ L+
Sbjct: 60 EFLGERIDHLKPHKIVHLGIARTFQ---NIRLFSSMNVLENVLIGFNKQMKYNIFEAFLH 116
Query: 121 KAK----ELWFDDKDMRRFVNVG-----------FSGGERKRLELLQALLLEPKLLLLDE 165
+ E F +K +G S G+++++E+ +A+ +P+LLLLDE
Sbjct: 117 LGRFGKIEQVFKEKAYAILEELGIAEFAYEKATSLSYGQQRKVEIARAMATQPRLLLLDE 176
Query: 166 PDSGVDVDSLSVISRKIEELH-NRGVSIILITHYGRIFGHIDKEKLKVHVMKDGKIVKSG 224
P +G++ ++ I +L + +S++LI H + ++K +V V+ GK + G
Sbjct: 177 PAAGMNSSESDELAGLIFKLRKDYKISVLLIEHDMKF---VNKLCDRVLVLDYGKTIFEG 233
Query: 225 GSEIIDMIEREGFKAIFGGE 244
++ D + + A + G+
Sbjct: 234 --KLCDAVNHKEVIAAYLGD 251
>sp|P17328|PROV_SALTY GLYCINE BETAINE/L-PROLINE TRANSPORT ATP-BINDING PROTEIN PROV
>gi|72466|pir||QREBVT glycine betaine/proline transport
protein proV - Salmonella typhimurium
>gi|47831|emb|CAA36921.1| (X52693) proV protein (AA
1-400) [Salmonella typhimurium]
Length = 400
Score = 69.9 bits (168), Expect = 3e-11
Identities = 63/240 (26%), Positives = 122/240 (50%), Gaps = 23/240 (9%)
Query: 17 LRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKIIFNGEDITSSSPDER- 75
++ +LA+ +GE VIMG +GSGKST+ + + + T+G+++ +G DI S E
Sbjct: 44 VKDASLAIEEGEIFVIMGLSGSGKSTMVRLL--NRLIEPTRGQVLIDGVDIAKISDAELR 101
Query: 76 --ARKGILLAFQVPPEIEGVRILDFLIQVLTEIKGMKPEEAYDVVLNKAKELWFDDKDMR 133
RK I + FQ + + +LD + E+ G+ +E + L+ +++ + + R
Sbjct: 102 EVRRKKIAMVFQSFALMPHMTVLDNTAFGM-ELAGIAAQERREKALDALRQVGLE--NYR 158
Query: 134 RFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDV---DSLSVISRKIEELHNRGV 190
SGG R+R+ L +AL + P +LL+DE S +D + K++ H R
Sbjct: 159 HAYPDELSGGMRQRVGLARALAINPDILLMDEAFSALDPLIRTEMQDELVKLQAKHQR-- 216
Query: 191 SIILITHYGRIFGHIDKEKL---KVHVMKDGKIVKSG-GSEIIDMIEREGFKAIFGGENV 246
+I+ I+H +D+ ++ +M++G++V+ G EI++ + + F G ++
Sbjct: 217 TIVFISH------DLDEAMRIGDRIAIMQNGEVVQVGTPDEILNNPANDYVRTFFRGVDI 270
>pir||T43920 YfuC protein [imported] - Yersinia enterocolitica
>gi|619575|emb|CAA87396.1| (Z47200) YfuC protein
[Yersinia enterocolitica]
Length = 349
Score = 69.9 bits (168), Expect = 3e-11
Identities = 73/237 (30%), Positives = 111/237 (46%), Gaps = 20/237 (8%)
Query: 16 ILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKIIFNGEDITSSSPDER 75
+L GI+L V G I+GP+GSGK+TL IAG GK+I G + S
Sbjct: 18 VLEGIDLQVTAGSRTAIVGPSGSGKTTLLRIIAGFE--TPDSGKVILQGNPLFDQSTHVP 75
Query: 76 ARK-GILLAFQVPPEIEGVRILDFLI--QVLTEIKGMKPEEAYDVVLNKAKELWFDDKDM 132
A K GI Q +G F + +KG K ++A + +K E+ D+ +
Sbjct: 76 AHKRGIGFVPQ-----DGALFPHFTAAGNIAYGLKGSKQDKARRI--DKLMEMVALDRRL 128
Query: 133 RRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSVISRK--IEELHNRGV 190
+ SGG+++R+ L +AL P L+LL EP S +D +L +RK E L +
Sbjct: 129 AQLWPHEISGGQQQRVALARALGQRPALMLLVEPFSTLDT-ALRASTRKAVAELLSQANI 187
Query: 191 SIILITH-YGRIFGHIDKEKLKVHVMKDGKIVKSGGSEIIDMIEREGFKAIFGGENV 246
+ IL+TH D +V VM+ GK+V G + + + + A F GE +
Sbjct: 188 ASILVTHDQSEALSFAD----QVAVMRAGKLVHVGAPQELYLRPIDEPTATFLGETL 240
>pir||E71296 probable spermidine/putrescine ABC transporter, ATP-binding protein
(potA) - syphilis spirochete >gi|3322953|gb|AAC65627.1|
(AE001240) spermidine/putrescine ABC transporter,
ATP-binding protein (potA) [Treponema pallidum]
Length = 379
Score = 69.9 bits (168), Expect = 3e-11
Identities = 58/223 (26%), Positives = 105/223 (47%), Gaps = 14/223 (6%)
Query: 24 VNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKIIFNGEDITSSSPDERARKGILLA 83
+ GEF I+GP+G GK+TL IAG + G + F+ + ++R + +
Sbjct: 32 IRQGEFFSILGPSGCGKTTLLRIIAGFEQ--PDSGDLTFDHVSVLGVGANKRRSNTVFQS 89
Query: 84 FQVPPEIEGVRILDFLIQVLTEIKGMKPEEAYDVVLNKAKELWFDDKDMRRFVNVGFSGG 143
+ + P + + F +++ K + E ++ + + K + SGG
Sbjct: 90 YALFPHLSVYENIAFPLRLKRLSKNLIRERVHEYLHLVQLDEHLHKKPHQ------LSGG 143
Query: 144 ERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSVISRKIEELHNR-GVSIILITH-YGRI 201
+++R+ + +AL+ EP +LLLDEP S +D S + +++ LH++ G++ + ITH
Sbjct: 144 QQQRVAIARALVCEPGVLLLDEPLSALDAKLRSNLLIELDTLHDQTGITFVFITHDQSEA 203
Query: 202 FGHIDKEKLKVHVMKDGKIVKSGGSEIIDMIEREGFKAIFGGE 244
D ++ VM GKI++ G I F A F GE
Sbjct: 204 LSVSD----RIAVMNKGKILQIGTPYEIYEQPATDFVAKFIGE 242
>pir||G81926 probable polyamine permease ATP-binding protein NMA0816 [imported]
- Neisseria meningitidis (group A strain Z2491)
>gi|7379535|emb|CAB84098.1| (AL162754) putative
polyamine permease ATP-binding protein [Neisseria
meningitidis Z2491]
Length = 374
Score = 69.9 bits (168), Expect = 3e-11
Identities = 65/252 (25%), Positives = 114/252 (44%), Gaps = 28/252 (11%)
Query: 2 LKIEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKII 61
L+I+ L + + I+L + E ++G +GSGKSTL +AG +GKII
Sbjct: 13 LQIQGLVKKFGDNYAVDNIDLDIYQHEIFALLGSSGSGKSTLLRMLAGMEN--PNQGKII 70
Query: 62 FNGEDITSSSPDERARKGILLAFQVPPEIEGVRILDFLIQVLTEIKGMKPEEAYDVVLNK 121
+G+DIT +P +R + ++ + P + + + F G+K ++ +
Sbjct: 71 LDGQDITKLAPYDRPINMMFQSYALFPHMTVEQNIAF---------GLKQDKMPKGEIAA 121
Query: 122 AKELWFDDKDMRRFVNVG---FSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSVI 178
E M +F SGG+++R+ L ++L PK+LLLDEP +D
Sbjct: 122 RVEEMLRLVQMTKFAKRKPHQLSGGQQQRIALARSLAKRPKILLLDEPLGALDKKLRQQT 181
Query: 179 SRK-IEELHNRGVSIILITHYGRIFGHIDKEK-----LKVHVMKDGKIVKSGGSEIIDMI 232
+ + L GV+ I++TH D+E+ ++ +M DG++ + G +
Sbjct: 182 QLELVNTLEQVGVTCIMVTH--------DQEEAMTMATRIAIMSDGQLQQVGTPSDVYDY 233
Query: 233 EREGFKAIFGGE 244
F A F GE
Sbjct: 234 PNSRFTAEFIGE 245
>pir||H83117 probable ATP-binding component of ABC transporter PA4222 [imported]
- Pseudomonas aeruginosa (strain PAO1)
>gi|9950437|gb|AAG07610.1|AE004839_3 (AE004839) probable
ATP-binding component of ABC transporter [Pseudomonas
aeruginosa]
Length = 574
Score = 69.9 bits (168), Expect = 3e-11
Identities = 70/238 (29%), Positives = 120/238 (50%), Gaps = 21/238 (8%)
Query: 12 EGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKIIFNGEDITSSS 71
+GR +L I+L + G +V++GP+G+GKS+L L + G Y V G+++ G DI S
Sbjct: 339 DGRALLEDISLRLEPGSLNVLVGPSGAGKSSL-LALLGR-LYDVDAGRVLLGGVDIRRLS 396
Query: 72 PDERARKGILLAFQVPPEIEGVRILDF-LIQVLTEIKGMKPEEAYDVVLNKAKELWFDDK 130
A L+ FQ G + + + +++ ++ E A V L + E W
Sbjct: 397 ETTLAASRNLV-FQDNGLFRGSVAWNLRMARADADLEALR-EAARAVGLLEEIEAWPQGW 454
Query: 131 DMRRFVNVG-----FSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSVISRKIEEL 185
D +VG SGG+R+RL L + LL LLLLDEP + +D S + + R + L
Sbjct: 455 DS----DVGPGGALLSGGQRQRLCLARGLLSTAPLLLLDEPTASLDAASEAQVLRSLLGL 510
Query: 186 HNRGVSIILITHYGRIFGHIDKEKLKVHVMKDGKIVKSGGSEIIDMIEREGFKAIFGG 243
R +++++TH + D +V ++++G++ SG D++ R+ + A F G
Sbjct: 511 RGRR-TLLVVTHRPALARQAD----QVLLLEEGRLRLSGLH--ADLLVRDDWYAGFVG 561
>pir||G69815 ABC transporter (ATP-binding protein) homolog ygaD - Bacillus
subtilis >gi|1673392|emb|CAB04797.1| (Z82044)
unidentified transporter-ATP binding [Bacillus subtilis]
>gi|2633192|emb|CAB12697.1| (Z99108) similar to ABC
transporter (ATP-binding protein) [Bacillus subtilis]
Length = 589
Score = 69.5 bits (167), Expect = 4e-11
Identities = 67/246 (27%), Positives = 115/246 (46%), Gaps = 26/246 (10%)
Query: 10 EVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKIIFNGEDITS 69
E + IL ++L VN GE ++G +G GKSTL I Y VT G+++ +G DI
Sbjct: 360 EKDKENILHDVSLKVNRGETVALVGMSGGGKSTLVSLIPRF--YDVTSGRLLIDGTDIR- 416
Query: 70 SSPDERARKGILLAFQVPPEIEGVRILDFLIQVLTEIKGMKPEEAYDVVLNKAKE----- 124
D AR L QV ++ + I+ I KP+ + ++ AK
Sbjct: 417 ---DYEARS---LRNQVGMVLQDTFLFSETIRENIAIG--KPDATLEEIIEAAKAANAHE 468
Query: 125 --LWFDDKDMRRFVNVG--FSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSVISR 180
+ F + R G SGG+++R+ + + L P LL+LDE S +D++S I
Sbjct: 469 FIMSFPEGYETRVGERGVKLSGGQKQRISIARVFLKNPPLLILDEATSALDLESEHYIQE 528
Query: 181 KIEELHNRGVSIILITHYGRIFGHIDKEKLKVHVMKDGKIVKSGGSEIIDMIEREGFKAI 240
+++L + + + H H D K+ VM++G I++ G + + E + +K +
Sbjct: 529 AMDKLAKDRTTFV-VAHRLSTITHAD----KIVVMENGTIIEIGTHDELMDYESQ-YKHL 582
Query: 241 FGGENV 246
F +N+
Sbjct: 583 FTIQNL 588
>emb|CAB69682.1| (AL137165) putative branched-chain amino acid transport ATP-binding
protein. [Streptomyces coelicolor A3(2)]
Length = 263
Score = 69.5 bits (167), Expect = 4e-11
Identities = 65/255 (25%), Positives = 119/255 (46%), Gaps = 25/255 (9%)
Query: 7 LHVE----VEGREI--LRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYK---VTK 57
LHVE GR + LR ++L V G ++G NG+GK+TL ++G + +T
Sbjct: 12 LHVESLDVTYGRALSALRSVSLTVPHGAVVALLGANGAGKTTLLRAVSGTLRLHRGAITA 71
Query: 58 GKIIFNGEDITSSSPDERARKGILLAFQVPPEIEGVRILDFL-IQVLTEIKGMKPEEAYD 116
G++ + + P R G++ QVP EG R+ L + G+
Sbjct: 72 GRVRYGDTVLDGRDPVAAVRAGVV---QVP---EGRRVFAGLTVDENLRAGGLGLNRRAP 125
Query: 117 VVLNKAKELWFDD----KDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDV 172
+ +A+E F + R SGGE++ L + +AL+ P+LLLLDEP G+
Sbjct: 126 AQVREARERVFTLFPRLAERTRQAAGLLSGGEQQMLAIGRALMAAPRLLLLDEPSLGLAP 185
Query: 173 DSLSVISRKIEELHNRGVSIILITHYGRIFGHIDKEKLKVHVMKDGKIVKSGGSEIIDMI 232
+ I+ + E++ +G +++L+ + + + HV++ G++ SG + D+
Sbjct: 186 MMVDRIAEVVREINAQGTAVLLVEQNAGMALSLAEH---AHVLEVGEVRLSGAA--ADLA 240
Query: 233 EREGFKAIFGGENVE 247
+ + ++ GE E
Sbjct: 241 RTDAVRRLYLGETTE 255
>gb|AAG32068.1|AF317790_1 (AF317790) ATP-binding transporter AviABCI [Streptomyces
viridochromogenes]
Length = 323
Score = 69.5 bits (167), Expect = 4e-11
Identities = 58/245 (23%), Positives = 108/245 (43%), Gaps = 18/245 (7%)
Query: 2 LKIEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKII 61
L E L L G +L V +G ++GPNG+GK+T ++ K G+ +
Sbjct: 9 LVAEGLRKTYGSETALDGFDLVVPEGTVCALLGPNGAGKTTAVRILS--TLLKPDGGRAL 66
Query: 62 FNGEDITSSSPDERARKGILLAFQVPPEIEGVRILDFLIQVLTEIKGMKPEEAYDVVLNK 121
G D+T + + R G+ + EI R + L + + + + +L +
Sbjct: 67 VAGLDVTREAAEVRRNIGVTGQYPAVEEILTGRENLEMWGRLYHVGRREAQRRTEELLEQ 126
Query: 122 AKELWFDDKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSVISRK 181
DK ++ + SGG R+RL+L PK+L LDEP +G+D + + + +
Sbjct: 127 FDLTEAADKRLKHY-----SGGMRRRLDLAAGFFTVPKVLFLDEPTTGLDPRNRNEVWKM 181
Query: 182 IEELHNRGVSIILITHYGRIFGHIDKEKLKVHVMKDGKIVKSGGSEIIDMIEREGFKAIF 241
+ + +G +++L T Y D+ ++ V+ G+ V G E + K++
Sbjct: 182 VRSMVEQGTTVLLTTQY---LEEADRLADQISVIDAGRGVVEGTPETL--------KSLV 230
Query: 242 GGENV 246
GG+ +
Sbjct: 231 GGDRI 235
>sp|P14175|PROV_ECOLI GLYCINE BETAINE/L-PROLINE TRANSPORT ATP-BINDING PROTEIN PROV
>gi|72467|pir||BVECPV glycine betaine/L-proline
transport ATP-binding protein proV - Escherichia coli
>gi|147373|gb|AAA24427.1| (M24856) proV peptide
[Escherichia coli] >gi|1789032|gb|AAC75724.1| (AE000352)
ATP-binding component of transport system for glycine,
betaine and proline [Escherichia coli K12]
>gi|1800065|dbj|BAA16542.1| (D90891) GLYCINE
BETAINE/L-PROLINE TRANSPORT ATP-BINDING PROTEIN PROV.
[Escherichia coli]
Length = 400
Score = 69.1 bits (166), Expect = 5e-11
Identities = 63/240 (26%), Positives = 121/240 (50%), Gaps = 23/240 (9%)
Query: 17 LRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKIIFNGEDITSSSPDER- 75
++ +LA+ +GE VIMG +GSGKST+ + + + T+G+++ +G DI S E
Sbjct: 44 VKDASLAIEEGEIFVIMGLSGSGKSTMVRLL--NRLIEPTRGQVLIDGVDIAKISDAELR 101
Query: 76 --ARKGILLAFQVPPEIEGVRILDFLIQVLTEIKGMKPEEAYDVVLNKAKELWFDDKDMR 133
RK I + FQ + + +LD + E+ G+ EE + L+ +++ + +
Sbjct: 102 EVRRKKIAMVFQSFALMPHMTVLDNTAFGM-ELAGINAEERREKALDALRQVGLE--NYA 158
Query: 134 RFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDV---DSLSVISRKIEELHNRGV 190
SGG R+R+ L +AL + P +LL+DE S +D + K++ H R
Sbjct: 159 HSYPDELSGGMRQRVGLARALAINPDILLMDEAFSALDPLIRTEMQDELVKLQAKHQR-- 216
Query: 191 SIILITHYGRIFGHIDKEKL---KVHVMKDGKIVKSG-GSEIIDMIEREGFKAIFGGENV 246
+I+ I+H +D+ ++ +M++G++V+ G EI++ + + F G ++
Sbjct: 217 TIVFISH------DLDEAMRIGDRIAIMQNGEVVQVGTPDEILNNPANDYVRTFFRGVDI 270
>gb|AAK42130.1| Antibiotic ABC transporter ATP binding protein [Sulfolobus
solfataricus]
Length = 297
Score = 68.7 bits (165), Expect = 6e-11
Identities = 68/256 (26%), Positives = 122/256 (47%), Gaps = 33/256 (12%)
Query: 1 MLKIEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKI 60
M+ + + + + L I+L V GEF ++GPNG+GK+TL + K KG++
Sbjct: 1 MIVVSSIVKKYGNKIALDNISLEVKKGEFVSLIGPNGAGKTTLIRILL--TLMKPDKGEV 58
Query: 61 IFNGEDITSSSPDERARKGILLAFQVPPEIEGVRILDFLIQVLTEIKGMKPEEAYDVVLN 120
GE+ + +A + PP + G ++L ++ +I+G+ E V+
Sbjct: 59 QILGENPFRNKRIFKAIGYVQEIPNYPPFLTGRQVL----ELSAKIRGVDKSEVKRVL-- 112
Query: 121 KAKELWFDDKDMRRFVN---VGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDSLSV 177
+ +M + N + +S G +R+ + ++LL P +L++DEP+ G+D +
Sbjct: 113 -------EFVEMENYANSPIIKYSKGMVQRIAIAESLLGNPSILIMDEPNMGID----PI 161
Query: 178 ISRKIEELHNR-----GVSIILITHYGRIFGHIDKEKLKVHVMKDGKIVKSGGSEIIDMI 232
S K EL N+ VSI++ +H + K ++ ++ GKIV SG E DMI
Sbjct: 162 FSLKTRELLNKLKRKDNVSILMTSHE---LEDVKKLSDRIFMIYKGKIVFSGTVE--DMI 216
Query: 233 -EREGFKAIFGGENVE 247
E G + I + +E
Sbjct: 217 KEFLGIQVIVETDEIE 232
>pir||C69819 ABC transporter (ATP-binding protein) homolog yhaQ - Bacillus
subtilis >gi|2226131|emb|CAA74424.1| (Y14078)
Hypothetical protein [Bacillus subtilis]
>gi|2633325|emb|CAB12829.1| (Z99109) similar to ABC
transporter (ATP-binding protein) [Bacillus subtilis]
Length = 298
Score = 68.7 bits (165), Expect = 6e-11
Identities = 65/255 (25%), Positives = 123/255 (47%), Gaps = 39/255 (15%)
Query: 1 MLKIEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAGHPKYKVTKGKI 60
ML I+ + + + G++L + + + ++G NG+GK+T I G +T+G I
Sbjct: 1 MLTIDHVTKTFGDYKAVDGLDLDIPEQQMFGLLGANGAGKTTTFRMILG--LLSITEGSI 58
Query: 61 IFNGEDITSSSPDERARKGILLAFQVPPEIEGV----RILDFLIQVLTEIKGMKPEEAYD 116
+ G + + + G L PE G+ ++ D L+ L +KGM+ EA
Sbjct: 59 SWKGRPVNYHISN---KIGYL------PEERGLYPKMKVRDQLVY-LARLKGMEKREA-- 106
Query: 117 VVLNKAKEL--WFDDKDMRRFVNVG---FSGGERKRLELLQALLLEPKLLLLDEPDSGVD 171
KEL W + ++ + N + G +++++ + A+L +P+LL+LDEP SG+D
Sbjct: 107 -----VKELGTWLERFNITDYENKKVEELAKGNQQKIQFISAVLHKPELLILDEPFSGLD 161
Query: 172 VDSLSVISRKIEELHNRGVSIILITHYGRIFGHIDKEKLKVHVMKDGKIVKSGGSEIIDM 231
++ ++ + L N GVSI+ +H H+++ + +++ GK V G
Sbjct: 162 PVNVELLKEAVISLKNSGVSILFSSHR---MEHVEELCENLCILQKGKPVVQG------- 211
Query: 232 IEREGFKAIFGGENV 246
+ + K FG +NV
Sbjct: 212 -KLKEIKRSFGKKNV 225
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.319 0.142 0.397
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 93061676
Number of Sequences: 2977
Number of extensions: 3861811
Number of successful extensions: 21028
Number of sequences better than 1.0e-10: 798
Number of HSP's better than 0.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 760
Number of HSP's that attempted gapping in prelim test: 19769
Number of HSP's gapped (non-prelim): 951
length of query: 247
length of database: 189,106,746
effective HSP length: 55
effective length of query: 192
effective length of database: 156,189,961
effective search space: 29988472512
effective search space used: 29988472512
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 164 (68.3 bits)