BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB1856 (PAB1856) DE:Hypothetical protein
(446 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||D75120 hypothetical protein PAB1856 - Pyrococcus abyssi (st... 890 0.0
sp|O50093|YD85_PYRHO HYPOTHETICAL PROTEIN PH1385 >gi|7429549|pir... 832 0.0
pir||B72260 conserved hypothetical protein - Thermotoga maritima... 291 8e-78
pir||T44566 conserved hypothetical protein [imported] - Pyrococc... 282 5e-75
emb|CAC11349.1| (AL445063) conserved hypothetical protein [Therm... 275 7e-73
pir||C72552 hypothetical protein APE1703 - Aeropyrum pernix (str... 274 1e-72
pir||E75313 conserved hypothetical protein - Deinococcus radiodu... 274 1e-72
gb|AAK41207.1| Conserved hypothetical protein [Sulfolobus solfat... 274 2e-72
pir||D70019 conserved hypothetical protein yurU - Bacillus subti... 265 1e-69
gb|AAG19052.1| (AE005004) Vng0525c [Halobacterium sp. NRC-1] 265 1e-69
pir||T35997 conserved hypothetical protein SCC22.07c - Streptomy... 264 2e-69
dbj|BAB07186.1| (AP001518) unknown conserved protein [Bacillus h... 260 3e-68
pir||A71303 conserved hypothetical protein TP0612 - syphilis spi... 259 4e-68
sp|O27218|YB50_METTH HYPOTHETICAL PROTEIN MTH1150 >gi|7429545|pi... 217 2e-55
sp|Q50519|YB50_METTW HYPOTHETICAL PROTEIN MTH1150 HOMOLOG (ORF2)... 209 6e-53
gi|11467362 ABC transporter subunit [Cyanophora paradoxa] >gi|13... 203 4e-51
gb|AAD03441.1| (AF118223) contains similarity to Guillardia thet... 196 6e-49
pir||G82676 ABC transporter membrane protein XF1476 [imported] -... 193 3e-48
sp|Q55790|Y074_SYNY3 HYPOTHETICAL 52.8 KD PROTEIN SLR0074 >gi|74... 189 4e-47
gi|11465706 hypothetical chloroplast ORF 24. [Porphyra purpurea]... 189 6e-47
gi|11467509 ORF486 [Odontella sinensis] >gi|1351748|sp|P49530|YC... 189 7e-47
gi|11467678 ABC transporter [Guillardia theta] >gi|6136610|sp|O7... 178 1e-43
pir||G70019 conserved hypothetical protein yurX - Bacillus subti... 173 3e-42
gi|11499942 conserved hypothetical protein [Archaeoglobus fulgid... 172 6e-42
pir||G81745 conserved hypothetical protein TC0056 [imported] - C... 169 5e-41
pir||H71482 probable ABC transporter - Chlamydia trachomatis (se... 168 9e-41
sp|Q49689|YE61_MYCLE HYPOTHETICAL 95.7 KDA PROTEIN B1496_C2_189 ... 167 3e-40
emb|CAB16171.1| (Z99125) hypothetical protein MLCL536.28c [Mycob... 167 3e-40
pir||C64926 ynhE protein - Escherichia coli >gi|1742763|dbj|BAA1... 166 6e-40
sp|P77522|YNHE_ECOLI HYPOTHETICAL 54.7 KDA PROTEIN IN LPP-AROD I... 166 6e-40
dbj|BAB07189.1| (AP001518) unknown conserved protein [Bacillus h... 165 1e-39
emb|CAC17125.1| (AJ301654) SufB protein [Pectobacterium chrysant... 164 2e-39
gi|11465463 unknown [Cyanidium caldarium] >gi|6466366|gb|AAF1294... 162 9e-39
pir||B72048 ABC transporter - Chlamydophila pneumoniae (strains ... 156 4e-37
sp|O53152|YE61_MYCTU HYPOTHETICAL 94.2 KDA PROTEIN RV1461 >gi|74... 142 9e-33
sp|Q02857|YC24_ANTSP HYPOTHETICAL PROTEIN IN ATPA 3'REGION (ORF ... 131 2e-29
pir||C75316 conserved hypothetical protein - Deinococcus radiodu... 113 4e-24
pir||S43896 hypothetical protein 470 - Plasmodium falciparum >gi... 108 1e-22
pir||F72255 conserved hypothetical protein - Thermotoga maritima... 99 1e-19
sp|Q60349|Y034_METJA HYPOTHETICAL PROTEIN MJ0034 >gi|2127989|pir... 96 8e-19
gi|11496556 ycf24 homolog [Toxoplasma gondii] >gi|5231259|gb|AAD... 96 1e-18
emb|CAA73004.1| (Y12333) hypothetical protein [Eimeria tenella] 90 6e-17
gb|AAG19053.1| (AE005004) Vng0527c [Halobacterium sp. NRC-1] 87 3e-16
sp|P35912|YC24_CYACA HYPOTHETICAL PROTEIN IN ATPA 3'REGION (ORF ... 87 4e-16
pir||E82676 ABC transporter membrane protein XF1474 [imported] -... 85 1e-15
sp|O58613|Y883_PYRHO HYPOTHETICAL PROTEIN PH0883 >gi|7518872|pir... 85 2e-15
sp|Q55792|Y076_SYNY3 HYPOTHETICAL 50.0 KD PROTEIN SLR0076 >gi|74... 78 3e-13
emb|CAC11350.1| (AL445063) conserved hypothetical protein [Therm... 75 2e-12
pir||H72047 conserved hypothetical protein CP0056 [imported] - C... 74 3e-12
>pir||D75120 hypothetical protein PAB1856 - Pyrococcus abyssi (strain Orsay)
>gi|5458188|emb|CAB49677.1| (AJ248285) hypothetical
protein [Pyrococcus abyssi]
Length = 446
Score = 890 bits (2276), Expect = 0.0
Identities = 446/446 (100%), Positives = 446/446 (100%)
Query: 1 MSETLTLTDARSIIENQIEELAKRNKEPEWMTKIRYRALEEFMRAPLGDPIISEEKLLNF 60
MSETLTLTDARSIIENQIEELAKRNKEPEWMTKIRYRALEEFMRAPLGDPIISEEKLLNF
Sbjct: 1 MSETLTLTDARSIIENQIEELAKRNKEPEWMTKIRYRALEEFMRAPLGDPIISEEKLLNF 60
Query: 61 IAKPEIEGIPDKIESLDDLPPEMKALLDRLGISEVEQKYIAGLAVQTDTGVIYNQFLQEW 120
IAKPEIEGIPDKIESLDDLPPEMKALLDRLGISEVEQKYIAGLAVQTDTGVIYNQFLQEW
Sbjct: 61 IAKPEIEGIPDKIESLDDLPPEMKALLDRLGISEVEQKYIAGLAVQTDTGVIYNQFLQEW 120
Query: 121 AKKGLIVLPTEEAIRKYPDIMKQHFLKLFKAGENKLTAYHTAVWNGGIFLYVKENLKVPF 180
AKKGLIVLPTEEAIRKYPDIMKQHFLKLFKAGENKLTAYHTAVWNGGIFLYVKENLKVPF
Sbjct: 121 AKKGLIVLPTEEAIRKYPDIMKQHFLKLFKAGENKLTAYHTAVWNGGIFLYVKENLKVPF 180
Query: 181 PLHLFFLIQESSLAQAPHIIIIAEKNSEVHLIEGCTAPILVRHSLHLDMTEAYIHDGAKV 240
PLHLFFLIQESSLAQAPHIIIIAEKNSEVHLIEGCTAPILVRHSLHLDMTEAYIHDGAKV
Sbjct: 181 PLHLFFLIQESSLAQAPHIIIIAEKNSEVHLIEGCTAPILVRHSLHLDMTEAYIHDGAKV 240
Query: 241 RLTVLQNWPEYVHTRPMTRAKVGKNAEFLNTTVSLGAGKSNIANPKYWVEEGGHVELNGV 300
RLTVLQNWPEYVHTRPMTRAKVGKNAEFLNTTVSLGAGKSNIANPKYWVEEGGHVELNGV
Sbjct: 241 RLTVLQNWPEYVHTRPMTRAKVGKNAEFLNTTVSLGAGKSNIANPKYWVEEGGHVELNGV 300
Query: 301 ILGQKDWYIDLGGEMYLQGKGASGLNSSKAVIMDKSSVITRGKIIAEAKKTKGHISCDAL 360
ILGQKDWYIDLGGEMYLQGKGASGLNSSKAVIMDKSSVITRGKIIAEAKKTKGHISCDAL
Sbjct: 301 ILGQKDWYIDLGGEMYLQGKGASGLNSSKAVIMDKSSVITRGKIIAEAKKTKGHISCDAL 360
Query: 361 LLSDKARMETYPGLVSLVDEAELSHEAAIGKIREEELFYLMSRGLTEEKATQLIVKGFVE 420
LLSDKARMETYPGLVSLVDEAELSHEAAIGKIREEELFYLMSRGLTEEKATQLIVKGFVE
Sbjct: 361 LLSDKARMETYPGLVSLVDEAELSHEAAIGKIREEELFYLMSRGLTEEKATQLIVKGFVE 420
Query: 421 PMLKDIPIEFVVEIKKIIELAVSGGL 446
PMLKDIPIEFVVEIKKIIELAVSGGL
Sbjct: 421 PMLKDIPIEFVVEIKKIIELAVSGGL 446
>sp|O50093|YD85_PYRHO HYPOTHETICAL PROTEIN PH1385 >gi|7429549|pir||C71011 hypothetical
protein PH1385 - Pyrococcus horikoshii
>gi|3257808|dbj|BAA30491.1| (AP000006) 446aa long
hypothetical protein [Pyrococcus horikoshii]
Length = 446
Score = 832 bits (2127), Expect = 0.0
Identities = 406/445 (91%), Positives = 434/445 (97%)
Query: 1 MSETLTLTDARSIIENQIEELAKRNKEPEWMTKIRYRALEEFMRAPLGDPIISEEKLLNF 60
MSETLTL+DA+SIIENQIEELAKRNKEPEWMTKIRY+ALEEFM+APL DP+I EE LLNF
Sbjct: 1 MSETLTLSDAKSIIENQIEELAKRNKEPEWMTKIRYKALEEFMKAPLNDPVIDEETLLNF 60
Query: 61 IAKPEIEGIPDKIESLDDLPPEMKALLDRLGISEVEQKYIAGLAVQTDTGVIYNQFLQEW 120
IAKPEIEGIP+K+ESLDDLPPEMK LLDRLGI+EVEQKYIAGLAVQTDTGVIYNQFLQEW
Sbjct: 61 IAKPEIEGIPEKVESLDDLPPEMKDLLDRLGINEVEQKYIAGLAVQTDTGVIYNQFLQEW 120
Query: 121 AKKGLIVLPTEEAIRKYPDIMKQHFLKLFKAGENKLTAYHTAVWNGGIFLYVKENLKVPF 180
AKKGLIVLPTEEA+R+YPDIMK+HFLKLFKAGE+KLTAYH A+WNGGIFLYVKENLKVPF
Sbjct: 121 AKKGLIVLPTEEAVRRYPDIMKEHFLKLFKAGESKLTAYHIAIWNGGIFLYVKENLKVPF 180
Query: 181 PLHLFFLIQESSLAQAPHIIIIAEKNSEVHLIEGCTAPILVRHSLHLDMTEAYIHDGAKV 240
PLHLFFLIQESSLAQAPHI IIAEKNSEVHLIEGCTAPILVRHSLHLDMTEAY+H+ AKV
Sbjct: 181 PLHLFFLIQESSLAQAPHITIIAEKNSEVHLIEGCTAPILVRHSLHLDMTEAYLHENAKV 240
Query: 241 RLTVLQNWPEYVHTRPMTRAKVGKNAEFLNTTVSLGAGKSNIANPKYWVEEGGHVELNGV 300
RLTVLQNWPEYVHTRPMTRAKVG+NAEF+NTTVSLGAGKSNIANPKYWV E G+VELNGV
Sbjct: 241 RLTVLQNWPEYVHTRPMTRAKVGRNAEFINTTVSLGAGKSNIANPKYWVGENGYVELNGV 300
Query: 301 ILGQKDWYIDLGGEMYLQGKGASGLNSSKAVIMDKSSVITRGKIIAEAKKTKGHISCDAL 360
ILGQKDWYIDLGGEM+LQG+G G+N+SK+VIMD+S+VITRGKI+AEAKKTKGHISCDAL
Sbjct: 301 ILGQKDWYIDLGGEMHLQGEGGRGINASKSVIMDESTVITRGKIVAEAKKTKGHISCDAL 360
Query: 361 LLSDKARMETYPGLVSLVDEAELSHEAAIGKIREEELFYLMSRGLTEEKATQLIVKGFVE 420
LLSDKARMETYPGLVSLVDEAELSHEAAIGKI+EEELFYLMSRGL+EEKATQLIVKGFVE
Sbjct: 361 LLSDKARMETYPGLVSLVDEAELSHEAAIGKIKEEELFYLMSRGLSEEKATQLIVKGFVE 420
Query: 421 PMLKDIPIEFVVEIKKIIELAVSGG 445
PMLKDIPIEFVVEIKKIIELAVSGG
Sbjct: 421 PMLKDIPIEFVVEIKKIIELAVSGG 445
>pir||B72260 conserved hypothetical protein - Thermotoga maritima (strain MSB8)
>gi|4981931|gb|AAD36440.1|AE001791_2 (AE001791)
conserved hypothetical protein [Thermotoga maritima]
Length = 464
Score = 291 bits (738), Expect = 8e-78
Identities = 157/435 (36%), Positives = 253/435 (58%), Gaps = 12/435 (2%)
Query: 15 ENQIEELAKRNKEPEWMTKIRYRALE---EFMRAPLGDPIISEE--KLLNFIAKPEIEGI 69
E I E+++ EPEWM K R +L+ E+ G I + K++++I KP+ +
Sbjct: 30 EKLIMEISRAKDEPEWMLKHRLESLKVFNEWHNPRFGVDISGLDLGKIVSYI-KPDAK-- 86
Query: 70 PDKIESLDDLPPEMKALLDRLGISEVEQKYIAGLAVQTDTGVIYNQFLQEWAKKGLIVLP 129
K S +++P E+K D+LGI E E+KY+AG+ Q D+ ++Y +E K G+I L
Sbjct: 87 --KSTSWEEVPEEVKEAFDKLGIPEAERKYLAGVGAQLDSEIVYQNMKKELEKMGVIFLD 144
Query: 130 TEEAIRKYPDIMKQHFLKLFKAGENKLTAYHTAVWNGGIFLYVKENLKVPFPLHLFFLIQ 189
E A+R+YPD++K++F+KL ++K A H A+W+GG FLYV +K+P PL +FL+
Sbjct: 145 MESAVREYPDLVKKYFMKLVPITDHKFAALHGAIWSGGTFLYVPAGVKIPMPLQAYFLMS 204
Query: 190 ESSLAQAPHIIIIAEKNSEVHLIEGCTAPILVRHSLHLDMTEAYIHDGAKVRLTVLQNWP 249
+ Q H II+AE+ SEV IEGC+AP +LH M E Y+ GAKV+ +QNW
Sbjct: 205 NPGMGQFEHTIIVAEEGSEVTFIEGCSAPRYNIINLHAGMVEIYVKKGAKVKYLTIQNWS 264
Query: 250 EYVHTRPMTRAKVGKNAEFLNTTVSLGAGKSNIANPKYWVEEGGHVELNGVILGQKDWYI 309
+ + R+ V + + SLG+ K+ + +G E + ++
Sbjct: 265 KNTYNLNTKRSIVDEEGSMTWVSGSLGSQKTMLYPMTILKGKGARAESMSITYAGPGQHM 324
Query: 310 DLGGEMYLQGKGASGLNSSKAVIMDKSSVITRG--KIIAEAKKTKGHISCDALLLSDKAR 367
D G ++ S + S+K++ + RG KI EA K+K + C AL+L ++++
Sbjct: 325 DTGSKVVHLAPYTSSIVSAKSISLGGGWAFYRGLLKITKEAVKSKASVECAALMLDNRSK 384
Query: 368 METYPGLVSLVDEAELSHEAAIGKIREEELFYLMSRGLTEEKATQLIVKGFVEPMLKDIP 427
+T P + D A++ HEA IG+I E+++FYLMSRGL+E++A +IVKGFVEP++K++P
Sbjct: 385 SDTVPIIEVETDRADVGHEARIGRIGEDQIFYLMSRGLSEQEAKAMIVKGFVEPVVKELP 444
Query: 428 IEFVVEIKKIIELAV 442
E+ VE+ K++EL +
Sbjct: 445 FEYAVELNKLLELEI 459
>pir||T44566 conserved hypothetical protein [imported] - Pyrococcus furiosus
>gi|6066239|gb|AAF03224.1|AF156097_4 (AF156097) ORF4
[Pyrococcus furiosus]
Length = 475
Score = 282 bits (714), Expect = 5e-75
Identities = 158/437 (36%), Positives = 247/437 (56%), Gaps = 9/437 (2%)
Query: 13 IIENQIEELAKRNKEPEWMTKIRYRALEEFMRAPLGDPIISEEKL----LNFIAKPEIEG 68
I + IEEL+K EP WM + R +ALE F + P+ ++ E+L L KPEI+
Sbjct: 36 ISRDTIEELSKVKNEPSWMLRHRLKALELFEKLPMPKWVVGIEELDLDNLVLYTKPEIQ- 94
Query: 69 IPDKIESLDDLPPEMKALLDRLGISEVEQKYIAGLAVQTDTGVIYNQFLQEWAKKGLIVL 128
+++ DDLP ++ +RL I E+E+++++GL D+ IY++ E+ KKG+I++
Sbjct: 95 --NEVRDWDDLPENIRKTFERLNIPEIEKRFLSGLTAVFDSESIYSKLKAEFEKKGIIMV 152
Query: 129 PTEEAIRKYPDIMKQHFLKLFKAGENKLTAYHTAVWNGGIFLYVKENLKVPFPLHLFFLI 188
P EEA+RKYPD++K++F K+F G++K A H A+W+GG+F+YV + +K+PFP+ FF+I
Sbjct: 153 PMEEAVRKYPDLVKRYFGKVFPPGDHKFAALHHALWSGGVFVYVPKGVKIPFPIEAFFVI 212
Query: 189 QESSLAQAPHIIIIAEKNSEVHLIEGCTAPILVRHSLHLDMTEAYIHDGAKVRLTVLQNW 248
+ Q H +IIA++ S +H IEGC+AP+ S H M E Y H A V+ T +QNW
Sbjct: 213 GSALEGQFEHTLIIADEGSYLHFIEGCSAPMYKGFSFHDGMVEIYAHKDATVKFTTIQNW 272
Query: 249 PEYVHTRPMTRAKVGKNAEFLNTTVSLGAGKSNIANPKYWVEEGGHVELNGVILGQKDWY 308
V RA + NA S+G+ + G V L +
Sbjct: 273 SRNVINFNNKRAIIEDNAYVEWIEGSIGSRITYTYPSSVLKGPGAKTTQYVVSLSNGPYL 332
Query: 309 IDLGGEMYLQGKGASGLNSSKAVIMDKSSVITRG--KIIAEAKKTKGHISCDALLLSDKA 366
D G + + S SK++ + I RG +I+ A + +SCD+L+L ++
Sbjct: 333 KDTGAKTWHLAPNTSSKIVSKSISANGGINIYRGLVRIMKGAINSTATVSCDSLILDKES 392
Query: 367 RMETYPGLVSLVDEAELSHEAAIGKIREEELFYLMSRGLTEEKATQLIVKGFVEPMLKDI 426
+ TYP + A + HEA GK+ E++LFYL +RG+ EE+A LIV GF+ +L+D+
Sbjct: 393 KAYTYPHNQNDEPTASIIHEATTGKLSEDKLFYLKARGIKEEEAKSLIVLGFISEVLEDL 452
Query: 427 PIEFVVEIKKIIELAVS 443
P E+V +KK+IEL S
Sbjct: 453 PFEYVEVLKKVIELEFS 469
>emb|CAC11349.1| (AL445063) conserved hypothetical protein [Thermoplasma
acidophilum]
Length = 481
Score = 275 bits (696), Expect = 7e-73
Identities = 151/432 (34%), Positives = 240/432 (54%), Gaps = 10/432 (2%)
Query: 18 IEELAKRNKEPEWMTKIRYRALEEFMRAPLGD--PIIS--EEKLLNFIAKPEIEGIPDKI 73
+EE+++ KEP+WM +IR A E FM P+ P +S + + + + ++P+ K
Sbjct: 48 VEEISEIKKEPDWMRRIRLHAYEIFMSKPVPTWGPDLSGIDWENMTYYSRPD----EVKA 103
Query: 74 ESLDDLPPEMKALLDRLGISEVEQKYIAGLAVQTDTGVIYNQFLQEWAKKGLIVLPTEEA 133
+ D++P E+K ++LG+ E+E+KY+AG Q D+ IYN +EW +KG++ + + A
Sbjct: 104 TNWDEVPKEIKDTFEKLGVPEMERKYLAGSIAQYDSEGIYNSIKKEWEEKGVVFMDLDSA 163
Query: 134 IRKYPDIMKQHFLKLFKAGENKLTAYHTAVWNGGIFLYVKENLKVPFPLHLFFLIQESSL 193
+++YPD++K++F K +NK A + AVW+GG FLYV + V PL +F I +
Sbjct: 164 LKRYPDLVKEYFAKAVPPSDNKFAALNVAVWSGGAFLYVPRGVHVDMPLQTYFRINGEAT 223
Query: 194 AQAPHIIIIAEKNSEVHLIEGCTAPILVRHSLHLDMTEAYIHDGAKVRLTVLQNWPEYVH 253
Q H I++A++ S VH +EGCTAP+ + SLH + E Y+ A R T +QNW V+
Sbjct: 224 GQFEHTIVVADEGSSVHYLEGCTAPVYSKDSLHAAIVEYYVMKNAHGRYTSVQNWSNSVY 283
Query: 254 TRPMTRAKVGKNAEFLNTTVSLGAGKSNIANPKYWVEEGGHVELNGVILGQKDWYIDLGG 313
P RA V +N SLG+ + I Y + L D G
Sbjct: 284 NMPTKRAWVEENGNMEWVGGSLGSKVTMIYPSSYLRGRNATTSNLNIALAGPGTVKDTGA 343
Query: 314 EMYLQGKGASGLNSSKAVIMDKSSVITRG--KIIAEAKKTKGHISCDALLLSDKARMETY 371
+ S +K+V + I RG +I +A K H+ CDALL++D++ T
Sbjct: 344 KAIHMAPNTSSKIIAKSVSLGDGKSIYRGLVRINKDAVNAKSHVQCDALLINDESVSYTM 403
Query: 372 PGLVSLVDEAELSHEAAIGKIREEELFYLMSRGLTEEKATQLIVKGFVEPMLKDIPIEFV 431
P A +HEA +GKI EEL YL SRGL+E++A+ LIV GF++ ++K+IP+EF
Sbjct: 404 PHDEIYEPTANFTHEATVGKIGTEELTYLRSRGLSEDEASSLIVLGFLDDVMKEIPMEFA 463
Query: 432 VEIKKIIELAVS 443
VE+ ++++L +S
Sbjct: 464 VEMNRLVKLEMS 475
>pir||C72552 hypothetical protein APE1703 - Aeropyrum pernix (strain K1)
>gi|5105391|dbj|BAA80704.1| (AP000062) 476aa long
hypothetical protein [Aeropyrum pernix]
Length = 476
Score = 274 bits (694), Expect = 1e-72
Identities = 153/441 (34%), Positives = 257/441 (57%), Gaps = 18/441 (4%)
Query: 13 IIENQIEELAKRNKEPEWMTKIRYRALEEFMRAP-----LGDPIISEEKLLNFIAKPEIE 67
I + IEE+++ KEPEWM ++R R+LE F + P +G +I ++++ + +KPE E
Sbjct: 38 ITRSTIEEISRIKKEPEWMKRLRLRSLELFYKLPTPKWLVGIDVIDLDEMIVY-SKPETE 96
Query: 68 GIPDKIESLDDLPPEMKALLDRLGISEVEQKYIAGLAVQTDTGVIYNQFLQEWAKKGLIV 127
+ S ++LP E++ +RLG+ E+E ++++GL+ D+ +Y + + +KG+IV
Sbjct: 97 ----RASSWEELPKEIREFYERLGLPEIEARFLSGLSAVFDSETVYARVKKYLEEKGVIV 152
Query: 128 LPTEEAIRKYPDIMKQHFLKLFKAGENKLTAYHTAVWNGGIFLYVKENLKVPFPLHLFFL 187
+P EEA++KYPD++K++F+++F ++K A H A+W+GG F+YV +K+ P+ FFL
Sbjct: 153 MPIEEAVQKYPDLVKRYFMRVFPPSDHKFAALHGALWSGGTFIYVPRGVKIREPIESFFL 212
Query: 188 IQESSLAQAPHIIIIAEKNSEVHLIEGCTAPILVRHSLHLDMTEAYIHDGAKVRLTVLQN 247
I +S Q H +I+A++ + V IEGC+AP L + S H M EAY H A +++ +QN
Sbjct: 213 IGKSGEGQFEHSLIVADEGAYVEWIEGCSAPRLTKFSFHDGMVEAYAHRNATIKIITVQN 272
Query: 248 WPEYVHTRPMTRAKVGKNAEFLNTTVSLGAGKSNIANPKYWVEEGGHVELNGVILGQKDW 307
W + V RA + A S+G+ K P ++ + V+ K
Sbjct: 273 WSKDVINLNNKRAIAEEGARVDWVEGSIGS-KMTFVYPSTILKGDNSSSRSAVVTIAKGP 331
Query: 308 YI-DLGGEMYLQGKGASGLNSSKAVIMDKSSVITRG--KIIAEAKKTKGHISCDALLLSD 364
Y+ D G +M G+ +K + D + RG +I+ A+ ++ C++L+L D
Sbjct: 332 YLKDSGSKMIHVGRNTRSQVINKTISADGGINVYRGIIRIVKGARNAVANVECESLILDD 391
Query: 365 KARMETYPGLVSLVDE--AELSHEAAIGKIREEELFYLMSRGLTEEKATQLIVKGFVEPM 422
K++ TYP + VDE A ++HEA G++ E +LFYL SRGLTEE+A LIV GF+E +
Sbjct: 392 KSKAHTYPH--NQVDEPTASVNHEATTGRLTEPQLFYLTSRGLTEEEAKSLIVLGFLEDV 449
Query: 423 LKDIPIEFVVEIKKIIELAVS 443
LK++P E+ + K++ L S
Sbjct: 450 LKELPFEYANVLTKVVRLEFS 470
>pir||E75313 conserved hypothetical protein - Deinococcus radiodurans (strain
R1) >gi|6459902|gb|AAF11655.1|AE002046_1 (AE002046)
conserved hypothetical protein [Deinococcus radiodurans]
Length = 468
Score = 274 bits (694), Expect = 1e-72
Identities = 146/450 (32%), Positives = 246/450 (54%), Gaps = 10/450 (2%)
Query: 3 ETLTLTDARSIIENQIEELAKRNKEPEWMTKIRYRALEEFMRAPLGDPIISEEKL----L 58
E + + + +E ++K EP+WM R +AL+ F+ P+ + L +
Sbjct: 22 EKYAIKAPKGLSREVVEMISKAKDEPQWMLDFRLKALDIFLSKPMPEWGADLSGLNLDEI 81
Query: 59 NFIAKPEIEGIPDKIESLDDLPPEMKALLDRLGISEVEQKYIAGLAVQTDTGVIYNQFLQ 118
+ KPE S DD+P ++K +RLGI E E+ +AG+ Q ++ ++Y+ +
Sbjct: 82 YYYIKPE----GFNARSWDDVPEDVKNTFERLGIPEAERAALAGVGAQYESEMVYHNLKE 137
Query: 119 EWAKKGLIVLPTEEAIRKYPDIMKQHFLKLFKAGENKLTAYHTAVWNGGIFLYVKENLKV 178
EW K G++ L E+ +R+YPD+ ++HF + +NK A ++AVW+GG F+Y+ + +KV
Sbjct: 138 EWEKLGVVFLSIEDGMRQYPDLFREHFATIVPPEDNKFAAINSAVWSGGSFVYIPKGVKV 197
Query: 179 PFPLHLFFLIQESSLAQAPHIIIIAEKNSEVHLIEGCTAPILVRHSLHLDMTEAYIHDGA 238
PL +F I S Q +II ++ ++ H IEGCTAP S H + E + +GA
Sbjct: 198 DIPLQTYFRINAESSGQFERTLIIVDEGAQAHYIEGCTAPAYNADSFHSGVIEIVVKEGA 257
Query: 239 KVRLTVLQNWPEYVHTRPMTRAKVGKNAEFLNTTVSLGAGKSNIANPKYWVEEGGHVELN 298
+ R + +QNW V+ RA V + +LG+ + Y +E+G E+
Sbjct: 258 RFRYSTIQNWSHNVYNLVTQRAAVYGSGVMEWVDGNLGSKVTMKYPACYLLEDGARGEVL 317
Query: 299 GVILGQKDWYIDLGGEMYLQGKGASGLNSSKAVIMDKSSVITRG--KIIAEAKKTKGHIS 356
+ + + + D G ++ SG SK++ D RG KI AK +K ++
Sbjct: 318 SIAMAGRGQHQDAGAKIVHFAPHTSGTIVSKSISKDSGRSSYRGLVKIYEGAKGSKTNVE 377
Query: 357 CDALLLSDKARMETYPGLVSLVDEAELSHEAAIGKIREEELFYLMSRGLTEEKATQLIVK 416
CDALLL ++AR +TYP + +A + HEA + KI +E++ YL SRGL+E++A LIV+
Sbjct: 378 CDALLLDEEARTDTYPYIEIEEKDASVGHEATVSKINDEQILYLQSRGLSEDEAAGLIVR 437
Query: 417 GFVEPMLKDIPIEFVVEIKKIIELAVSGGL 446
GF+EP+ K++P+E+ VE+ ++IEL + G +
Sbjct: 438 GFIEPIAKELPLEYAVELNRLIELEMEGSV 467
>gb|AAK41207.1| Conserved hypothetical protein [Sulfolobus solfataricus]
Length = 479
Score = 274 bits (693), Expect = 2e-72
Identities = 152/434 (35%), Positives = 250/434 (57%), Gaps = 18/434 (4%)
Query: 18 IEELAKRNKEPEWMTKIRYRALEEFMRAP----LGDPIISEE-KLLNFIAKPEIEGIPDK 72
IEE+++ KEPEWM K+R + LE F + P L D + S + L KP + DK
Sbjct: 44 IEEISRIKKEPEWMLKLRLKGLELFEKLPTPNWLPDVLSSLDISALELYVKPGV----DK 99
Query: 73 IESLDDLPPEMKALLDRLGISEVEQKYIAGLAVQTDTGVIYNQFLQEWAKKGLIVLPTEE 132
+S ++LPPE++ D LGI E E+K++ GL ++ IY+ E KKG+++LP +E
Sbjct: 100 AQSWEELPPEIRKYYDELGIPESEKKFLGGLVAVLESEPIYSNVKIELMKKGVVMLPIDE 159
Query: 133 AIRKYPDIMKQHFLKLFKAGENKLTAYHTAVWNGGIFLYVKENLKVPFPLHLFFLIQESS 192
A+ KYPD+MK++F+K+F A ++K A H A+W+GG+F+YV +N+K+ P+ FF+I
Sbjct: 160 AVSKYPDLMKEYFMKIFPASDHKFAALHGALWSGGVFVYVPKNVKITTPVEGFFVIGSEL 219
Query: 193 LAQAPHIIIIAEKNSEVHLIEGCTAPILVRHSLHLDMTEAYIHDGAKVRLTVLQNWPEYV 252
Q H ++IA++ S +H IEGCTAP L ++S H M E Y A ++ T +QNW + V
Sbjct: 220 EGQFEHTLLIADEGSYIHFIEGCTAPQLKKYSFHDGMVELYAKKNAYIKFTTIQNWSKNV 279
Query: 253 HTRPMTRAKVGKNAEFLNTTVSLGAGKSNIANPKYWVEEGGHVELNGVIL----GQKDWY 308
RA +N+ SLG+ K + P + G + +++ G+ +W
Sbjct: 280 INFNNKRAWADENSTVEWVEGSLGS-KYSFVYPS-TILRGKNASSTSLVVTMTSGEGEWK 337
Query: 309 IDLGGEMYLQGKGASGLNSSKAVIMDKSSVITRG--KIIAEAKKTKGHISCDALLLSDKA 366
D G +M +K + + + RG K+ A +K + CD+L+L DK
Sbjct: 338 -DSGSKMIHAAPYTKSKVVNKNIGFNGGVNVYRGLVKVNKGAVGSKAFVKCDSLMLDDKT 396
Query: 367 RMETYPGLVSLVDEAELSHEAAIGKIREEELFYLMSRGLTEEKATQLIVKGFVEPMLKDI 426
+ TYP L ++A++ HEA ++ E++LFYLM+RG+ E++AT ++V GF++ ++K++
Sbjct: 397 KAYTYPHNQVLEEDADVGHEAHTFRMNEDQLFYLMTRGIDEKEATSMLVLGFIDEIMKEL 456
Query: 427 PIEFVVEIKKIIEL 440
P E+ + K+I+L
Sbjct: 457 PFEYATMLNKVIKL 470
>pir||D70019 conserved hypothetical protein yurU - Bacillus subtilis
>gi|2635763|emb|CAB15256.1| (Z99120) similar to
hypothetical proteins [Bacillus subtilis]
Length = 465
Score = 265 bits (669), Expect = 1e-69
Identities = 144/444 (32%), Positives = 242/444 (54%), Gaps = 14/444 (3%)
Query: 11 RSIIENQIEELAKRNKEPEWMTKIRYRALEEFMRAPL----GDPIISEEKLLNFIAKPEI 66
R + + +EE+++ +EP+WM R ++LE F P+ GD + + KP
Sbjct: 27 RGLTKEIVEEISRMKEEPQWMLDFRLKSLEHFYNMPMPQWGGDLNSLNFDEITYYVKPSE 86
Query: 67 EGIPDKIESLDDLPPEMKALLDRLGISEVEQKYIAGLAVQTDTGVIYNQFLQEWAKKGLI 126
S D++P E+K D+LGI E EQKY+AG++ Q ++ V+Y+ ++ +G++
Sbjct: 87 RSE----RSWDEVPEEIKQTFDKLGIPEAEQKYLAGVSAQYESEVVYHNMKEDLEAQGIV 142
Query: 127 VLPTEEAIRKYPDIMKQHFLKLFKAGENKLTAYHTAVWNGGIFLYVKENLKVPFPLHLFF 186
T+ A+++ DI ++H+ K+ +NK A ++AVW+GG F+YV + +KV PL +F
Sbjct: 143 FKDTDSALKENEDIFREHWAKVIPPTDNKFAALNSAVWSGGSFIYVPKGVKVETPLQAYF 202
Query: 187 LIQESSLAQAPHIIIIAEKNSEVHLIEGCTAPILVRHSLHLDMTEAYIHDGAKVRLTVLQ 246
I ++ Q +II ++ + VH +EGCTAP+ +SLH + E + G R T +Q
Sbjct: 203 RINSENMGQFERTLIIVDEEASVHYVEGCTAPVYTTNSLHSAVVEIIVKKGGYCRYTTIQ 262
Query: 247 NWPEYVHTRPMTRAKVGKNAEFLNTTVSLGAGKSNIANPKYWVE-EGGHVELNGVILGQK 305
NW V+ R +NA ++G+ K + P ++ EG + L K
Sbjct: 263 NWANNVYNLVTKRTVCEENATMEWIDGNIGS-KLTMKYPACILKGEGARGMTLSIALAGK 321
Query: 306 DWYIDLGGEMYLQGKGASGLNSSKAVIMDKSSVITRGKIIAEAKKTKG---HISCDALLL 362
+ D G +M S SK++ V RG I+ +K +G +I CD L++
Sbjct: 322 GQHQDAGAKMIHLAPNTSSTIVSKSISKQGGKVTYRG-IVHFGRKAEGARSNIECDTLIM 380
Query: 363 SDKARMETYPGLVSLVDEAELSHEAAIGKIREEELFYLMSRGLTEEKATQLIVKGFVEPM 422
+K+ +T P L D L HEA + K+ EE+LFYLMSRG++EE+AT++IV GF+EP
Sbjct: 381 DNKSTSDTIPYNEILNDNISLEHEAKVSKVSEEQLFYLMSRGISEEEATEMIVMGFIEPF 440
Query: 423 LKDIPIEFVVEIKKIIELAVSGGL 446
K++P+E+ VE+ ++I+ + G +
Sbjct: 441 TKELPMEYAVEMNRLIKFEMEGSI 464
>gb|AAG19052.1| (AE005004) Vng0525c [Halobacterium sp. NRC-1]
Length = 474
Score = 265 bits (669), Expect = 1e-69
Identities = 146/456 (32%), Positives = 257/456 (56%), Gaps = 15/456 (3%)
Query: 3 ETLTLTDARSIIENQIEELAKRNKEPEWMTKIRYRALEEFMRAPL-----GDPIISE--- 54
E + + E I +++ EP+WM R RALE++ + P+ G P ++E
Sbjct: 21 ENSAFESEKGLTEETIRVISEDKDEPDWMLDRRLRALEQYTKMPMPTDWPGQPDLTELDI 80
Query: 55 EKLLNFIAKPEIEGIPDKIESLDDLPPEMKALLDRLGISEVEQKYIAGLAVQTDTGVIYN 114
E+++ +I +P+++ + +DLP E++ ++LGI E E+ ++G+ Q ++ V+Y
Sbjct: 81 EEIVPYI-RPDVDK-RSGADEWEDLPDEIQDTFEQLGIPEAERNALSGVGAQYESEVVYQ 138
Query: 115 QFLQEWAKKGLIVLPTEEAIRKYPDIMKQHFL-KLFKAGENKLTAYHTAVWNGGIFLYVK 173
+ W +KG++ +EA+++YP+++K+HF+ +NK A H AVW+GG F+YV
Sbjct: 139 NMQERWEEKGVVFCNMDEAVQEYPELVKEHFMTSCVPPSDNKFAALHGAVWSGGSFVYVP 198
Query: 174 ENLKVPFPLHLFFLIQESSLAQAPHIIIIAEKNSEVHLIEGCTAPILVRHSLHLDMTEAY 233
E++ V P+ +F + + Q H +IIAE+ SEVH IEGC+AP H+LH E +
Sbjct: 199 EDVTVNMPVQAYFRMNSEGMGQFEHTLIIAEEGSEVHYIEGCSAPKYGSHNLHSGGVEVF 258
Query: 234 IHDGAKVRLTVLQNWPEYVHTRPMTRAKVGKNAEFLNTTVSLGAGKSNIANPKYWVEEGG 293
+ + A V+ + +QNW + RA V N + S+G+ K+ + P ++ G
Sbjct: 259 VGEDAHVQYSTVQNWSKNTFNLNTKRAVVEGNGTMEWVSGSMGS-KATMLYPSTILKGRG 317
Query: 294 HVELNGVILGQKDWY-IDLGGEMYLQGKGASGLNSSKAVIMDKSSVITRGKI-IAE-AKK 350
+ + I D ID G ++Y S SK++ D RG + IA+ A+
Sbjct: 318 ATDNHITIAFAGDGQDIDTGAKVYHNAPDTSSTIESKSIAKDGGRTNYRGLVHIADGAED 377
Query: 351 TKGHISCDALLLSDKARMETYPGLVSLVDEAELSHEAAIGKIREEELFYLMSRGLTEEKA 410
+K ++ CDAL+ + + +T P + + +++HEA +GKI +E++FYL SRGL ++ A
Sbjct: 378 SKTNVECDALMFDNDSTSDTMPYMEINESKVDVAHEATVGKIGDEDVFYLQSRGLDDDDA 437
Query: 411 TQLIVKGFVEPMLKDIPIEFVVEIKKIIELAVSGGL 446
Q+IV GF+EP+ +++PIE+ VE+ ++IEL + G L
Sbjct: 438 KQMIVSGFIEPITEELPIEYAVELNRLIELEMEGSL 473
>pir||T35997 conserved hypothetical protein SCC22.07c - Streptomyces coelicolor
>gi|5459392|emb|CAB50750.1| (AL096839) conserved
hypothetical protein [Streptomyces coelicolor A3(2)]
Length = 473
Score = 264 bits (667), Expect = 2e-69
Identities = 148/453 (32%), Positives = 252/453 (54%), Gaps = 13/453 (2%)
Query: 2 SETLTLTDARSIIENQIEELAKRNKEPEWMTKIRYRALEEFMRAPL---GDPI--ISEEK 56
S+T + R I E+ + +++ + EPEWMTK+R + L F + P+ G + I +
Sbjct: 25 SDTAGASAKRGINEDVVRDISAKKNEPEWMTKLRLKGLRLFEKKPMPNWGSDLSGIDFDN 84
Query: 57 LLNFIAKPEIEGIPDKIESLDDLPPEMKALLDRLGISEVE-QKYIAGLAVQTDTGVIYNQ 115
+ F+ E + ES +DLP ++K D+LGI E E Q+ +AG+A Q ++ V+Y+Q
Sbjct: 85 IKYFVRSTEKQA-----ESWEDLPEDIKNTYDKLGIPEAEKQRLVAGVAAQYESEVVYHQ 139
Query: 116 FLQEWAKKGLIVLPTEEAIRKYPDIMKQHFLKLFKAGENKLTAYHTAVWNGGIFLYVKEN 175
++ ++G+I L T+ A++++P++ K++F + G+NK + ++AVW+GG F+YV +
Sbjct: 140 IREDLEEQGVIFLDTDTALKEHPELFKEYFGTVIPVGDNKFASLNSAVWSGGSFIYVPKG 199
Query: 176 LKVPFPLHLFFLIQESSLAQAPHIIIIAEKNSEVHLIEGCTAPILVRHSLHLDMTEAYIH 235
+ V PL +F I ++ Q +II ++ + VH +EGCTAPI SLH + E +
Sbjct: 200 VHVEIPLQAYFRINTENMGQFERTLIIVDEGAYVHYVEGCTAPIYKSDSLHSAVVEIIVK 259
Query: 236 DGAKVRLTVLQNWPEYVHTRPMTRAKVGKNAEFLNTTVSLGAGKSNIANPKYWVEEGGHV 295
A+ R T +QNW V+ RA + A ++G+ + Y + E
Sbjct: 260 KNARCRYTTIQNWSNNVYNLVTKRAVAYEGATMEWIDGNIGSKVTMKYPAVYLMGEHAKG 319
Query: 296 ELNGVILGQKDWYIDLGGEMYLQGKGASGLNSSKAVIMDKSSVITRGKI-IAE-AKKTKG 353
E + + + D G +M S SK+V RG + I E A +K
Sbjct: 320 ETLSIAFAGEGQHQDAGSKMVHMAPNTSSNIVSKSVARGGGRTSYRGLVEIGEGAHGSKS 379
Query: 354 HISCDALLLSDKARMETYPGLVSLVDEAELSHEAAIGKIREEELFYLMSRGLTEEKATQL 413
++ CDALL+ +R +TYP + D+ + HEA + K+ E++LFYLMSRGL+E +A +
Sbjct: 380 NVLCDALLVDTISRSDTYPYVDVREDDVSMGHEATVSKVSEDQLFYLMSRGLSEFEAMAM 439
Query: 414 IVKGFVEPMLKDIPIEFVVEIKKIIELAVSGGL 446
IV+GFVEP+ K++P+E+ +E+ ++IEL + G +
Sbjct: 440 IVRGFVEPIAKELPMEYALELNRLIELQMEGAV 472
>dbj|BAB07186.1| (AP001518) unknown conserved protein [Bacillus halodurans]
Length = 465
Score = 260 bits (657), Expect = 3e-68
Identities = 142/444 (31%), Positives = 248/444 (54%), Gaps = 14/444 (3%)
Query: 11 RSIIENQIEELAKRNKEPEWMTKIRYRALEEFMRAPL----GDPIISEEKLLNFIAKPEI 66
R + +EE+++ +EP+WM R ++LE+F + P+ GD + + + KP
Sbjct: 27 RGLTREIVEEISRMKQEPQWMLDFRLKSLEQFYKMPMPQWGGDLTELDFDDITYYVKPS- 85
Query: 67 EGIPDKIE-SLDDLPPEMKALLDRLGISEVEQKYIAGLAVQTDTGVIYNQFLQEWAKKGL 125
+K E S D++P E+K D+LGI E EQKY+AG++ Q ++ V+Y+ ++ + G+
Sbjct: 86 ----EKSERSWDEVPEEIKNTFDKLGIPEAEQKYLAGVSAQYESEVVYHNMKEDLEELGI 141
Query: 126 IVLPTEEAIRKYPDIMKQHFLKLFKAGENKLTAYHTAVWNGGIFLYVKENLKVPFPLHLF 185
I T+ A+++ DI K++F + +NK A ++AVW+GG F+YV + +K PL +
Sbjct: 142 IFKDTDSALKENEDIFKEYFGTIIPPTDNKFAALNSAVWSGGSFIYVPKGVKTETPLQAY 201
Query: 186 FLIQESSLAQAPHIIIIAEKNSEVHLIEGCTAPILVRHSLHLDMTEAYIHDGAKVRLTVL 245
F I ++ Q +IIA+++S VH +EGCTAP+ +SLH + E + A R T +
Sbjct: 202 FRINSENMGQFERTLIIADEDSSVHYVEGCTAPVYTTNSLHSAVVEIIVKKDAYCRYTTI 261
Query: 246 QNWPEYVHTRPMTRAKVGKNAEFLNTTVSLGAGKSNIANPKYWVE-EGGHVELNGVILGQ 304
QNW V+ RA +NA ++G+ K + P ++ EG + + +
Sbjct: 262 QNWAPNVYNLVTKRAVAYENATMEWIDGNIGS-KLTMKYPAVIMKGEGAKGTILSIAIAG 320
Query: 305 KDWYIDLGGEMYLQGKGASGLNSSKAVIMDKSSVITRG--KIIAEAKKTKGHISCDALLL 362
K + D G ++ S SK++ V RG +++ +K I CD L++
Sbjct: 321 KGQHQDAGAKVLHLAPNCSSTIVSKSISKQGGKVSYRGIAHFGRKSQGSKSKIECDTLIM 380
Query: 363 SDKARMETYPGLVSLVDEAELSHEAAIGKIREEELFYLMSRGLTEEKATQLIVKGFVEPM 422
+++ +T P L ++ L HEA + K+ E++LFYLMSRG++EE+AT++IV GF+EP
Sbjct: 381 DNESTSDTIPYNEILNNDITLEHEATVSKVSEDQLFYLMSRGISEEEATEMIVMGFIEPF 440
Query: 423 LKDIPIEFVVEIKKIIELAVSGGL 446
K++P+E+ VE+ ++I+ + G +
Sbjct: 441 TKELPMEYAVEMNRLIKFEMEGSI 464
>pir||A71303 conserved hypothetical protein TP0612 - syphilis spirochete
>gi|3322910|gb|AAC65588.1| (AE001236) conserved
hypothetical protein [Treponema pallidum]
Length = 479
Score = 259 bits (655), Expect = 4e-68
Identities = 133/450 (29%), Positives = 244/450 (53%), Gaps = 11/450 (2%)
Query: 4 TLTLTDARSIIENQIEELAKRNKEPEWMTKIRYRALEEFMRAPLGD-----PIISEEKLL 58
T T + + + +E++++R +EP+WM +R R+L FM+ P+ + + ++++
Sbjct: 33 TYTYSTGKGLNAQVVEKISRRKREPQWMLDLRLRSLRYFMKRPMPEWGADISDLDIQEIV 92
Query: 59 NFIAKPEIEGIPDKIESLDDLPPEMKALLDRLGISEVEQKYIAGLAVQTDTGVIYNQFLQ 118
++I + ES DD+P E+K DRLGI E E++ +AG+ Q D+ V+Y+
Sbjct: 93 HYI----VSDFKPIAESWDDVPEEIKKTFDRLGIPEAERRSLAGVGAQYDSEVVYHNLRA 148
Query: 119 EWAKKGLIVLPTEEAIRKYPDIMKQHFLKLFKAGENKLTAYHTAVWNGGIFLYVKENLKV 178
+ ++G++ L E A+ K+ DI++ HF+ L K E+K A H AVW+GG F+YV + ++V
Sbjct: 149 DLEQQGVVYLDMESAVHKHEDIVRAHFMHLIKPNEHKFAALHGAVWSGGSFVYVPKGVQV 208
Query: 179 PFPLHLFFLIQESSLAQAPHIIIIAEKNSEVHLIEGCTAPILVRHSLHLDMTEAYIHDGA 238
PL +F + + Q H +II ++ + +H IEGC+AP +++LH E Y+ A
Sbjct: 209 DLPLQSYFRLNANQSGQFEHTLIIVDEGASLHFIEGCSAPKYYKNALHAGAVELYVKKNA 268
Query: 239 KVRLTVLQNWPEYVHTRPMTRAKVGKNAEFLNTTVSLGAGKSNIANPKYWVEEGGHVELN 298
++R + ++NW ++ RA V ++ + S G+ + + + E
Sbjct: 269 RLRYSTIENWSRNLYNLNTKRAIVDEDGVIEWISGSFGSRVTMLYPMSILRGDRSRSEFT 328
Query: 299 GVILGQKDWYIDLGGEMYLQGKGASGLNSSKAVIMDKSSVITRG--KIIAEAKKTKGHIS 356
G+ Y+D G + G+ ++++ + + RG I +A K
Sbjct: 329 GITFASAGQYLDTGTKTVHLGRNTVSEVHARSISKNGGTANYRGLLSIGPKADGAKAVAE 388
Query: 357 CDALLLSDKARMETYPGLVSLVDEAELSHEAAIGKIREEELFYLMSRGLTEEKATQLIVK 416
C++L+L +++ +T P + D ++ HEA IG+I + +FYLM RGL E+ A LIV+
Sbjct: 389 CESLMLDNQSHTDTIPIIDVRTDNVDIGHEAKIGRISDRVVFYLMQRGLDEQTAISLIVR 448
Query: 417 GFVEPMLKDIPIEFVVEIKKIIELAVSGGL 446
GFVEP+ K++P+E+ VE+ +I + + G +
Sbjct: 449 GFVEPVSKELPLEYAVELNNLISIELEGAI 478
>sp|O27218|YB50_METTH HYPOTHETICAL PROTEIN MTH1150 >gi|7429545|pir||C69020 ABC
transporter Ycf24 - Methanobacterium thermoautotrophicum
(strain Delta H) >gi|2622255|gb|AAB85639.1| (AE000884)
ABC transporter subunit Ycf24 [Methanobacterium
thermoautotrophicum]
Length = 410
Score = 217 bits (547), Expect = 2e-55
Identities = 129/386 (33%), Positives = 206/386 (52%), Gaps = 13/386 (3%)
Query: 65 EIEGIPDKIESLDDLPPEMKALLDRLGISEVEQKYIAGLAVQTDTGVIYNQFLQEWAKKG 124
E G +++ ++P E++ L R+G+ + E++ AG +Q D I A +
Sbjct: 31 EEAGEHEEVTRAKEVPKEVQETLLRVGV-DPEERERAGTFIQVDQSGICTTC----ASES 85
Query: 125 LIVLPTEEAIRKYPDIMKQHFLKLFKAGENKLTAYHTAVWN-----GGIFLYVKENLKVP 179
+ ++ A+ KY +K + K +K TA TA+ GG F+ K +
Sbjct: 86 IEIMGMNVALDKY-SWLKDYMWKAVAVDTDKYTAT-TALREAEGEMGGYFIRSKPGAREV 143
Query: 180 FPLHLFFLIQESSLAQAPHIIIIAEKNSEVHLIEGCTAPILVRHSLHLDMTEAYIHDGAK 239
FPL I + + Q H I+IAE+NSE+H+I GC V +LH+ ++E Y+ GA+
Sbjct: 144 FPLQACMFIGDERVMQTAHNIVIAEENSELHIITGCATGEDVSSALHVGVSEFYLKKGAR 203
Query: 240 VRLTVLQNWPEYVHTRPMTRAKVGKNAEFLNTTVSLGAGKSNIANPK-YWVEEGGHVELN 298
+ T++ NW E V RP T VG +A ++N + KS + P Y E V
Sbjct: 204 ITFTMVHNWAEQVEVRPRTGIMVGDDATYINNYILTSPVKSIQSYPTAYCTGENSRVVFQ 263
Query: 299 GVILGQKDWYIDLGGEMYLQGKGASGLNSSKAVIMDKSSVITRGKIIAEAKKTKGHISCD 358
++ GQKD +D+G + L+G+G+S S+AV D S + +RG + + KGH+ C
Sbjct: 264 SILGGQKDSVLDMGSRVILEGRGSSAEMVSRAVSKDSSQIYSRGHLAGRVPEVKGHLECH 323
Query: 359 ALLLSDKARMETYPGLVSLVDEAELSHEAAIGKIREEELFYLMSRGLTEEKATQLIVKGF 418
L+LSD + + P L E E+SHEAA+GKI EEE+ YL SRGLTEE+A +IV+GF
Sbjct: 324 GLVLSDDSMIYAVPELEGSATELEMSHEAAVGKIAEEEVMYLTSRGLTEEEAASMIVRGF 383
Query: 419 VEPMLKDIPIEFVVEIKKIIELAVSG 444
+ + +P E E K+++++++ G
Sbjct: 384 LSMDITGLPPELAAETKRMLDMSLKG 409
>sp|Q50519|YB50_METTW HYPOTHETICAL PROTEIN MTH1150 HOMOLOG (ORF2)
>gi|726070|gb|AAA87430.1| (U19364) unknown
[Methanobacterium thermoautotrophicum]
Length = 410
Score = 209 bits (526), Expect = 6e-53
Identities = 125/386 (32%), Positives = 206/386 (52%), Gaps = 13/386 (3%)
Query: 65 EIEGIPDKIESLDDLPPEMKALLDRLGISEVEQKYIAGLAVQTDTGVIYNQFLQEWAKKG 124
E G +++ ++P +++ L ++G+ + E++ AG +Q D I A +
Sbjct: 31 EEAGEHEEVPRAREVPKKVQETLLKVGV-DPEERERAGTFIQVDQSGICTTC----ASES 85
Query: 125 LIVLPTEEAIRKYPDIMKQHFLKLFKAGENKLTAYHTAVWN-----GGIFLYVKENLKVP 179
+ ++ A+ +Y +K + K +K TA TA+ GG F+ +
Sbjct: 86 IEIMGMNVALDRY-SWLKDYMWKAVAVDTDKYTAT-TALREAEGEMGGYFIRSMPGSREV 143
Query: 180 FPLHLFFLIQESSLAQAPHIIIIAEKNSEVHLIEGCTAPILVRHSLHLDMTEAYIHDGAK 239
FPL I + ++ Q H IIIAE+NSE+H+I GC V +LH+ ++E Y+ GAK
Sbjct: 144 FPLQACMFIGDENVMQTAHNIIIAEENSELHIITGCATGQDVSSALHVGVSEFYLKKGAK 203
Query: 240 VRLTVLQNWPEYVHTRPMTRAKVGKNAEFLNTTVSLGAGKSNIANPK-YWVEEGGHVELN 298
+ T++ NW E V RP T VG +A +++ + KS + P Y E V
Sbjct: 204 ITFTMVHNWAEQVEVRPRTGIMVGDDATYISNYILTSPVKSIQSYPTAYCTGENSRVVFQ 263
Query: 299 GVILGQKDWYIDLGGEMYLQGKGASGLNSSKAVIMDKSSVITRGKIIAEAKKTKGHISCD 358
++ GQKD +D+G + L+G+G+S S+AV D S + +RG + + KGH+ C
Sbjct: 264 SILGGQKDSVLDMGSRVILEGRGSSAEMVSRAVSKDASQIYSRGHLAGRVPEVKGHLECH 323
Query: 359 ALLLSDKARMETYPGLVSLVDEAELSHEAAIGKIREEELFYLMSRGLTEEKATQLIVKGF 418
L+LSD + + P L E E+SHEAA+GKI EEE+ YL SRGLTE++A +IV+GF
Sbjct: 324 GLVLSDDSMIYAVPELEGSATELEMSHEAAVGKIAEEEVMYLTSRGLTEDEAASMIVRGF 383
Query: 419 VEPMLKDIPIEFVVEIKKIIELAVSG 444
+ + +P E E K+++++++ G
Sbjct: 384 LSMDITGLPPELAAETKRMLDMSLKG 409
>gi|11467362 ABC transporter subunit [Cyanophora paradoxa]
>gi|1351747|sp|P48260|YC24_CYAPA HYPOTHETICAL 54.3 KD
PROTEIN YCF24 >gi|7448280|pir||T06907 probable ABC
transport protein - Cyanophora paradoxa cyanelle
>gi|1016163|gb|AAA81250.1| (U30821) ABC transporter
subunit [Cyanophora paradoxa]
Length = 486
Score = 203 bits (510), Expect = 4e-51
Identities = 129/461 (27%), Positives = 230/461 (48%), Gaps = 29/461 (6%)
Query: 8 TDARSIIENQIEELAKRNKEPEWMTKIRYRALEEFMR-------APLGDPIISEEKLLNF 60
T ++ + E I ++++ EP++M + R +A +++ A L P I+ + ++ +
Sbjct: 32 TISKGLTEETIRLISEKKNEPQFMLEFRLQAYRKWLEMSNEPEWAHLNYPKINYQDMVYY 91
Query: 61 IAKPEIEGIPDKIESLDDLPPEMKALLDRLGISEVEQKYIAGLAVQT--DTGVIYNQFLQ 118
A + + K++SLD++ P + ++LGI EQK +A +AV D+ + F +
Sbjct: 92 SAPKQKK----KLQSLDEVDPTLLETFEKLGIPLTEQKRLANVAVDAIFDSVSVATTFKE 147
Query: 119 EWAKKGLIVLPTEEAIRKYPDIMKQHFLKLFKAGENKLTAYHTAVWNGGIFLYVKENLKV 178
E AK+G+I P EA++KYPD++K++ + +N + + AV++ G F Y+ +N++
Sbjct: 148 ELAKEGVIFCPISEAVQKYPDLIKKYLGSVVSTSDNYFSCLNAAVFSDGSFCYIPKNVRC 207
Query: 179 PFPLHLFFLIQESSLAQAPHIIIIAEKNSEVHLIEGCTAPILVRHSLHLDMTEAYIHDGA 238
P L +F I Q +I+A++ S V +EGCTAP + LH + E D A
Sbjct: 208 PLELSTYFRINNGESGQFERTLIVADEGSYVSYLEGCTAPQFDTNQLHAAVVELVALDNA 267
Query: 239 KVRLTVLQNW-----------PEYVHTRPMTRAKVGKNAEFLNTTVSLGAGKSNIANPKY 287
+++ + +QNW +V R + GKN++ T V G+ +
Sbjct: 268 EIKYSTVQNWYAGDENGKGGIYNFVTKRGLC---AGKNSKISWTQVETGSAITWKYPSCV 324
Query: 288 WVEEGGHVELNGVILGQKDWYIDLGGEMYLQGKGASGLNSSKAVIMDKSSVITRG--KII 345
+ + E V L + D G +M GK SK + S RG KI
Sbjct: 325 LLGDNSIGEFYSVALTNRYQQADTGTKMIHIGKNTRSRIISKGISAGHSQNSYRGLVKIG 384
Query: 346 AEAKKTKGHISCDALLLSDKARMETYPGLVSLVDEAELSHEAAIGKIREEELFYLMSRGL 405
+A + + CD+LL+ D ++ T+P L A++ HEA+ KI EE++FY + RG+
Sbjct: 385 PKAVGARNYSQCDSLLIGDNSQANTFPHLQIKNPTAKVEHEASTSKIGEEQIFYFLQRGI 444
Query: 406 TEEKATQLIVKGFVEPMLKDIPIEFVVEIKKIIELAVSGGL 446
E+A LI+ GF + ++P+EF +E K++ L + G +
Sbjct: 445 NAEEAISLIISGFCREVFNNLPMEFALEADKLLGLKLEGSV 485
>gb|AAD03441.1| (AF118223) contains similarity to Guillardia theta ABC transporter
(GB:AF041468) [Arabidopsis thaliana]
>gi|7267235|emb|CAB80842.1| (AL161501) putative ABC
transporter [Arabidopsis thaliana]
Length = 557
Score = 196 bits (492), Expect = 6e-49
Identities = 130/461 (28%), Positives = 225/461 (48%), Gaps = 26/461 (5%)
Query: 6 TLTDARSIIENQIEELAKRNKEPEWMTKIRYRALEEFMRAPLGDPIISEEKL--LNFIAK 63
+ T + + E I ++K +EP+WM + R++A +F++ L +P S+ + +NF
Sbjct: 102 SFTIPKGLSEETIRLISKLKEEPDWMLEFRFKAYAKFLK--LEEPKWSDNRYPSINFQDM 159
Query: 64 PEIEGIPDK--IESLDDLPPEMKALLDRLGISEVEQKYIAGLAVQT--DTGVIYNQFLQE 119
K + SLD++ P++ D+LG+ EQK +A +AV D+ I +
Sbjct: 160 CYYSAPKKKPTLNSLDEVDPQLLEYFDKLGVPLTEQKRLANVAVDAVIDSVSIATTHRKT 219
Query: 120 WAKKGLIVLPTEEAIRKYPDIMKQHFLKLFKAGENKLTAYHTAVWNGGIFLYVKENLKVP 179
K G+I EAIR+YPD++K++ ++ + +N A ++AV++ G F Y+ +N + P
Sbjct: 220 LEKSGVIFCSISEAIREYPDLIKKYLGRVVPSDDNYYAALNSAVFSDGSFCYIPKNTRCP 279
Query: 180 FPLHLFFLIQESSLAQAPHIIIIAEKNSEVHLIEGCTAPILVRHSLHLDMTEAYIHDGAK 239
P+ +F I Q +I+AE+ S V +EGCTAP + LH + E Y GA+
Sbjct: 280 MPISTYFRINAMETGQFERTLIVAEEGSFVEYLEGCTAPSYDTNQLHAAVVELYCGKGAE 339
Query: 240 VRLTVLQNW-----------PEYVHTRPMTRAKVGKNAEFLNTTVSLGAGKSNIANPKYW 288
++ + +QNW +V R + G ++ T V G+ P
Sbjct: 340 IKYSTVQNWYAGDEQGKGGIYNFVTKRGLC---AGDRSKISWTQVETGSA-ITWKYPSVV 395
Query: 289 VEEGGHV-ELNGVILGQKDWYIDLGGEMYLQGKGASGLNSSKAVIMDKSSVITRG--KII 345
+E V E V L D G +M +GK SK + S RG ++
Sbjct: 396 LEGDDSVGEFYSVALTNNYQQADTGTKMIHKGKNTKSRIISKGISAGHSRNCYRGLVQVQ 455
Query: 346 AEAKKTKGHISCDALLLSDKARMETYPGLVSLVDEAELSHEAAIGKIREEELFYLMSRGL 405
++A+ K +CD++L+ DKA TYP + A++ HEA+ KI E++LFY RG+
Sbjct: 456 SKAEGAKNTSTCDSMLIGDKAAANTYPYIQVKNPSAKVEHEASTSKIGEDQLFYFQQRGI 515
Query: 406 TEEKATQLIVKGFVEPMLKDIPIEFVVEIKKIIELAVSGGL 446
E+A ++ GF + +P EF E+ +++ + + G +
Sbjct: 516 DHERALAAMISGFCRDVFNKLPDEFGAEVNQLMSIKLEGSV 556
>pir||G82676 ABC transporter membrane protein XF1476 [imported] - Xylella
fastidiosa (strain 9a5c)
>gi|9106500|gb|AAF84285.1|AE003977_8 (AE003977) ABC
transporter membrane protein [Xylella fastidiosa]
Length = 485
Score = 193 bits (486), Expect = 3e-48
Identities = 125/451 (27%), Positives = 223/451 (48%), Gaps = 31/451 (6%)
Query: 18 IEELAKRNKEPEWMTKIRYRALEEFMRAPLGD-------PIISEEKLLNFIAKPEIEGIP 70
I L+ + EPEWMT+ R A ++ P+ + PI + + L++ + P+
Sbjct: 43 IRALSAKKHEPEWMTEWRLAAYRHWLNMPMPEWAKLHIAPI--DFQALSYYSAPK----G 96
Query: 71 DKIESLDDLPPEMKALLDRLGISEVEQKYIAGLAVQT--DTGVIYNQFLQEWAKKGLIVL 128
K SLD++P E+ D+LG+ E+ +AG+AV D+ + F +E A+KG+I
Sbjct: 97 PKYASLDEVPKELLDTYDKLGVPLHERARLAGVAVDAVFDSVSLGTTFRKELAEKGIIFC 156
Query: 129 PTEEAIRKYPDIMKQHFLKLFKAGENKLTAYHTAVWNGGIFLYVKENLKVPFPLHLFFLI 188
EAI+++PD+++Q+ + +N A ++AV++ G F+++ + ++ P L +F I
Sbjct: 157 SISEAIQEHPDLIRQYLGSVVPVRDNYFAALNSAVFSDGSFVFIPKGVRCPMELSTYFRI 216
Query: 189 QESSLAQAPHIIIIAEKNSEVHLIEGCTAPILVRHSLHLDMTEAYIHDGAKVRLTVLQNW 248
Q +I+ E+ + V +EGCTAPI + LH + E + A+++ + +QNW
Sbjct: 217 NAGHTGQFERTLIVCEEQAYVSYLEGCTAPIRDENQLHAAVVELVAQEDAEIKYSTVQNW 276
Query: 249 -----------PEYVHTRPMTRAKVGKNAEFLNTTVSLGAGKSNIANPKYWVEEGGHVEL 297
+V R R G ++ + T V G+ + + + E
Sbjct: 277 YPGDEAGRGGIYNFVTKRAECR---GARSKVIWTQVETGSAITWKYPSCVLLGDDSTGEF 333
Query: 298 NGVILGQKDWYIDLGGEMYLQGKGASGLNSSKAVIMDKSSVITRG--KIIAEAKKTKGHI 355
+ V L + D G +M GK SK + RG KI A+ + H
Sbjct: 334 HSVALTRHHQQADTGTKMIHIGKRTKSKIVSKGISAGHGQNTYRGLVKIDRNAEGARNHT 393
Query: 356 SCDALLLSDKARMETYPGLVSLVDEAELSHEAAIGKIREEELFYLMSRGLTEEKATQLIV 415
CD+LL+ + T+P + A + HEA KI +++LFY +RG+ EE A +IV
Sbjct: 394 QCDSLLIGKQCGAHTFPYIEVKHPNATVEHEATTSKISDDQLFYCRARGIAEEDAVSIIV 453
Query: 416 KGFVEPMLKDIPIEFVVEIKKIIELAVSGGL 446
GF + + +++P+EF VE KK++++++ G +
Sbjct: 454 DGFCKQVFRELPMEFAVEAKKLLDISLEGSV 484
>sp|Q55790|Y074_SYNY3 HYPOTHETICAL 52.8 KD PROTEIN SLR0074 >gi|7448276|pir||S76598
hypothetical protein - Synechocystis sp. (strain PCC
6803) >gi|1001705|dbj|BAA10542.1| (D64004) ABC
transporter subunit [Synechocystis sp.]
Length = 480
Score = 189 bits (476), Expect = 4e-47
Identities = 122/455 (26%), Positives = 226/455 (48%), Gaps = 27/455 (5%)
Query: 11 RSIIENQIEELAKRNKEPEWMTKIRYRALEEFMRAP------LGDPIISEEKLLNFIAKP 64
R + E+ + ++ + EPE+M R RA ++ + P I + ++ + A
Sbjct: 29 RGLSEDVVRLISAKKNEPEFMLDFRLRAYRHWLTMAEPTWPAVHYPPIDYQDIIYYSAPK 88
Query: 65 EIEGIPDKIESLDDLPPEMKALLDRLGISEVEQKYIAGLAVQT--DTGVIYNQFLQEWAK 122
+ + K+ESLD++ P + ++LGI EQK ++ +AV D+ I F ++ A+
Sbjct: 89 QSK---KKLESLDEVDPALLETFEKLGIPLSEQKRLSNVAVDAIFDSVSIGTTFKEKLAE 145
Query: 123 KGLIVLPTEEAIRKYPDIMKQHFLKLFKAGENKLTAYHTAVWNGGIFLYVKENLKVPFPL 182
G+I EA++++PD+++++ + +N A ++AV++ G F+++ + +K P L
Sbjct: 146 DGVIFCSISEALQEHPDLVQKYLGSVVPTADNFFAALNSAVFSDGSFVFIPKGVKCPMEL 205
Query: 183 HLFFLIQESSLAQAPHIIIIAEKNSEVHLIEGCTAPILVRHSLHLDMTEAYIHDGAKVRL 242
+F I Q +IIAE+ + V +EGCTAP+ + LH + E D A ++
Sbjct: 206 STYFRINNGDTGQFERTLIIAEEGASVSYLEGCTAPMYDTNQLHAAVVELVALDNADIKY 265
Query: 243 TVLQNW-----------PEYVHTRPMTRAKVGKNAEFLNTTVSLGAGKSNIANPKYWVEE 291
+ +QNW +V R + + G N++ T V G+ + V +
Sbjct: 266 STVQNWYAGDENGKGGIYNFVTKRGLCK---GVNSKISWTQVETGSAITWKYPSCVLVGD 322
Query: 292 GGHVELNGVILGQKDWYIDLGGEMYLQGKGASGLNSSKAVIMDKSSVITRG--KIIAEAK 349
E + L D G +M GK + SK + S+ RG K+ +A+
Sbjct: 323 NSVGEFYSIALTNNKQQADTGTKMIHIGKNTRSIIISKGISAGNSANSYRGLVKMGPKAQ 382
Query: 350 KTKGHISCDALLLSDKARMETYPGLVSLVDEAELSHEAAIGKIREEELFYLMSRGLTEEK 409
+ + CD++L+ D+A T+P + + A++ HEA+ KI E++LFY RG++EE
Sbjct: 383 GARNYSQCDSMLIGDRAAANTFPYIQVDNNTAKVEHEASTSKIGEDQLFYFAQRGISEED 442
Query: 410 ATQLIVKGFVEPMLKDIPIEFVVEIKKIIELAVSG 444
A ++V GF + +L ++P+EF E K++ L + G
Sbjct: 443 AVSMLVSGFCKDVLNELPMEFAAEADKLLSLKLEG 477
>gi|11465706 hypothetical chloroplast ORF 24. [Porphyra purpurea]
>gi|1723328|sp|P51240|YC24_PORPU HYPOTHETICAL 54.4 KD
PROTEIN YCF24 (ORF487) >gi|2147530|pir||S73161
hypothetical protein 24 - red alga (Porphyra purpurea)
chloroplast >gi|1276706|gb|AAC08126.1| (U38804)
hypothetical chloroplast ORF 24. [Porphyra purpurea]
Length = 487
Score = 189 bits (475), Expect = 6e-47
Identities = 125/455 (27%), Positives = 225/455 (48%), Gaps = 28/455 (6%)
Query: 11 RSIIENQIEELAKRNKEPEWMTKIRYRALEEFMR------APLGDPIISEEKLLNFIAKP 64
R I ++ ++K+ EPE++ R +A E++ + A L P I ++ + A P
Sbjct: 37 RGISREVVKLISKKKNEPEYLLNFRLKAYEKWTKMKNPKWAHLKHPNIDFNSII-YYAVP 95
Query: 65 EIEGIPDKIESLDDLPPEMKALLDRLGISEVEQKYIAGLAVQT--DTGVIYNQFLQEWAK 122
+++ ++ SLD++ PE+ ++LGIS EQK ++ +AV D+ I F +E A+
Sbjct: 96 KLK---KELNSLDEVDPEILDTFNKLGISLNEQKRLSNVAVDAVFDSVSIATTFKKELAE 152
Query: 123 KGLIVLPTEEAIRKYPDIMKQHFLKLFKAGENKLTAYHTAVWNGGIFLYVKENLKVPFPL 182
G+I EAIR YPD+++++ + +G+N A ++AV++ G F Y+ + P L
Sbjct: 153 AGVIFCSISEAIRNYPDLIQKYLGTVVPSGDNYFAALNSAVFSDGSFCYIPPDTVCPLEL 212
Query: 183 HLFFLIQESSLAQAPHIIIIAEKNSEVHLIEGCTAPILVRHSLHLDMTEAYIHDGAKVRL 242
+F I Q +I+A++ S+V +EGCTAP + LH + E D A+++
Sbjct: 213 STYFRINNEESGQFERTLIVADRGSKVSYLEGCTAPQYDTNQLHAAIVELIALDDAEIKY 272
Query: 243 TVLQNW-----------PEYVHTRPMTRAKVGKNAEFLNTTVSLGAGKSNIANPKYWVEE 291
+ +QNW +V R + GKN++ T V G+ + +
Sbjct: 273 STVQNWYAGNKDGKGGIYNFVTKRGLCS---GKNSKISWTQVETGSAITWKYPGCILAGD 329
Query: 292 GGHVELNGVILGQKDWYIDLGGEMYLQGKGASGLNSSKAVIMDKSSVITRG--KIIAEAK 349
E V L D G +M G SK + KS RG KI ++
Sbjct: 330 NSQGEFYSVALTNNYQEADTGTKMIHIGNNTKSKIISKGISAGKSKNSYRGLVKIGPQSF 389
Query: 350 KTKGHISCDALLLSDKARMETYPGLVSLVDEAELSHEAAIGKIREEELFYLMSRGLTEEK 409
++ + CD+LL+ ++ T+P + A++ HEA+ KI E+++FY + RG+ E+
Sbjct: 390 NSRNYSQCDSLLIGQSSQANTFPYIQVQNPTAKVEHEASTSKISEDQIFYFLQRGINLEE 449
Query: 410 ATQLIVKGFVEPMLKDIPIEFVVEIKKIIELAVSG 444
+ L++ GF + + ++P+EF VE +++ L + G
Sbjct: 450 SVSLMISGFCKDVFNELPMEFAVEADRLLSLKLEG 484
>gi|11467509 ORF486 [Odontella sinensis] >gi|1351748|sp|P49530|YC24_ODOSI
HYPOTHETICAL 54.3 KD PROTEIN YCF24 (ORF486)
>gi|7448278|pir||S78314 conserved hypothetical protein
486 - Odontella sinensis chloroplast
>gi|1185204|emb|CAA91687.1| (Z67753) ORF486 [Odontella
sinensis]
Length = 486
Score = 189 bits (474), Expect = 7e-47
Identities = 126/458 (27%), Positives = 222/458 (47%), Gaps = 25/458 (5%)
Query: 11 RSIIENQIEE-----LAKRNKEPEWMTKIRYRALEEF--MRAPLGDPIISEEKLLNFIAK 63
+ IIE + E ++K+ EP+++ + R +A +++ M+ P I E I
Sbjct: 31 KDIIEKGLNEDVICLISKKKNEPKFLLEFRLKAFKKWKEMKCPDWAQIKFSEIDYQDIIY 90
Query: 64 PEIEGIPDKIESLDDLPPEMKALLDRLGISEVEQKYIAGLAVQT--DTGVIYNQFLQEWA 121
+ K+ SLD++ PE+ ++LGIS EQK +A +A+ D+ I F +E A
Sbjct: 91 YSAPKVKKKLNSLDEVDPELLKTFEKLGISLTEQKRLANVAIDAVFDSVSIATTFKEELA 150
Query: 122 KKGLIVLPTEEAIRKYPDIMKQHFLKLFKAGENKLTAYHTAVWNGGIFLYVKENLKVPFP 181
+ G+I EAI++YP++++++ + G+N +A ++AV+ G F Y+ ++ P
Sbjct: 151 ECGVIFSSISEAIQEYPELIEKYLGSVVPIGDNYFSALNSAVFTDGSFCYIPKDTICPLE 210
Query: 182 LHLFFLIQESSLAQAPHIIIIAEKNSEVHLIEGCTAPILVRHSLHLDMTEAYIHDGAKVR 241
L +F I + Q +I+AEKNS+V +EGCTAP + LH + E + A ++
Sbjct: 211 LSTYFRINDQKSGQFERTLIVAEKNSQVSYLEGCTAPQYDSNQLHAAVVELVALENADIK 270
Query: 242 LTVLQNW-----------PEYVHTRPMTRAKVGKNAEFLNTTVSLGAGKSNIANPKYWVE 290
+ +QNW +V R + G N++ T V G+ + V
Sbjct: 271 YSTVQNWYAGNNYGEGGIYNFVTKRGLC---AGSNSKISWTQVETGSNITWKYPSCLLVG 327
Query: 291 EGGHVELNGVILGQKDWYIDLGGEMYLQGKGASGLNSSKAVIMDKSSVITRG--KIIAEA 348
+ E V L D G +M GK SK + S RG I +A
Sbjct: 328 DKAKGEFYSVALTNNYQQADTGSKMIHVGKNTRSRIVSKGISAGNSKNTYRGLVNISNKA 387
Query: 349 KKTKGHISCDALLLSDKARMETYPGLVSLVDEAELSHEAAIGKIREEELFYLMSRGLTEE 408
+ + CD+LL+ + + T+P + A++ HEA+ KI EE++FY + RG+ E
Sbjct: 388 IGARNYSQCDSLLIGNLSNANTFPFISVQNPTAKIEHEASTSKIGEEQIFYFLQRGIPIE 447
Query: 409 KATQLIVKGFVEPMLKDIPIEFVVEIKKIIELAVSGGL 446
K +L++ GF + + ++P+EF E +++ L + G +
Sbjct: 448 KGVELMISGFCQEVFTELPLEFAAEADRLLTLKLEGSV 485
>gi|11467678 ABC transporter [Guillardia theta] >gi|6136610|sp|O78473|YC24_GUITH
HYPOTHETICAL 54.0 KDA PROTEIN YCF24
>gi|3603003|gb|AAC35664.1| (AF041468) ABC transporter
[Guillardia theta]
Length = 483
Score = 178 bits (447), Expect = 1e-43
Identities = 125/451 (27%), Positives = 216/451 (47%), Gaps = 20/451 (4%)
Query: 11 RSIIENQIEELAKRNKEPEWMTKIRYRALEEFMRAPLGDPIISEEKLLNF--IAKPEIEG 68
+ + E+ I+E++K EP +M R ++ + + L + +N+ I
Sbjct: 33 KGLDEDIIKEISKLKCEPSYMLDFRLKSYILWKKMSLPEWACLTYLNINYQDIVYYSAPK 92
Query: 69 IPDKIESLDDLPPEMKALLDRLGISEVEQKYIAGLAVQT--DTGVIYNQFLQEWAKKGLI 126
K++SL+D+ ++ D+LGI EQK +A +AV D+ + F QE + G++
Sbjct: 93 NSTKLDSLEDVDKKILETFDKLGIPLNEQKKLANVAVDAIFDSVSVGTTFKQELSNVGVL 152
Query: 127 VLPTEEAIRKYPDIMKQHFLKLFKAGENKLTAYHTAVWNGGIFLYVKENLKVPFPLHLFF 186
P EA KY +++++ + G+N A ++AV++ G F Y+ N+K P L +F
Sbjct: 153 FCPLSEATNKYSTLVEKYLGSVVPIGDNYFAALNSAVFSEGSFCYIPPNVKCPLELSTYF 212
Query: 187 LIQESSLAQAPHIIIIAEKNSEVHLIEGCTAPILVRHSLHLDMTEAYIHDGAKVRLTVLQ 246
I + Q +IIA+ NS V +EGCTAP+ ++ LH + E + A++R + +Q
Sbjct: 213 RINNENSGQFERTLIIADFNSYVSYLEGCTAPMYDKNQLHAAVVELIALENAEIRYSTVQ 272
Query: 247 NW-----------PEYVHTRPMTRAKVGKNAEFLNTTVSLGAGKSNIANPKYWVEEGGHV 295
NW +V R + GK+++ T V G+ + V E
Sbjct: 273 NWYSGDTNGKGGIYNFVTKRGLC---AGKSSKISWTQVETGSAITWKYPSCILVGEDSVG 329
Query: 296 ELNGVILGQKDWYIDLGGEMYLQGKGASGLNSSKAVIMDKSSVITRG--KIIAEAKKTKG 353
E V L D G +M G+G+ SK + S RG KI A +
Sbjct: 330 EFYSVALTNNYQQADTGTKMIHVGRGSKSRIISKGISAGYSKNTYRGQVKININALGSIN 389
Query: 354 HISCDALLLSDKARMETYPGLVSLVDEAELSHEAAIGKIREEELFYLMSRGLTEEKATQL 413
+ CD++L+ ++ TYP + + + HEA+ KI EE+LFY + RG++ E+A L
Sbjct: 390 NSQCDSMLIGPYSQANTYPYIQVSNAMSRVEHEASTSKIEEEQLFYFLQRGISVEQAISL 449
Query: 414 IVKGFVEPMLKDIPIEFVVEIKKIIELAVSG 444
++ GF + +P+EF VE K++ + + G
Sbjct: 450 LISGFCRDVFVKLPMEFAVEADKLLSVKLEG 480
>pir||G70019 conserved hypothetical protein yurX - Bacillus subtilis
>gi|2635766|emb|CAB15259.1| (Z99120) similar to
hypothetical proteins [Bacillus subtilis]
Length = 437
Score = 173 bits (435), Expect = 3e-42
Identities = 128/445 (28%), Positives = 228/445 (50%), Gaps = 16/445 (3%)
Query: 5 LTLTDARSIIENQIEELAKRNKEPEWMTKIRYRALEEFMRAPLGDPIISEEKLLNF--IA 62
+TL S+ + ++ +++++EP W+ +R +ALE+ P+ P ++ NF A
Sbjct: 1 MTLGTKLSVDQEYLKSFSEKHQEPAWLKNLRLQALEQAEDLPMPKPDKTKITNWNFTNFA 60
Query: 63 KPEIEGIPDKIESLDDLPPEMKALLDRLGISEVEQKYIAGLAVQTDTGVIYNQFLQEWAK 122
K ++ P + SL+DL E+KAL+D E E K L VQ D + QE
Sbjct: 61 KHTVDNEP--LSSLEDLTDEVKALID----IENEDKT---LYVQRDQTPAHLSLSQELKD 111
Query: 123 KGLIVLPTEEAIRKYPDIMKQHFLKL-FKAGENKLTAYHTAVWNGGIFLYVKENLKVPFP 181
KG+I A R++ D+++++F+K K E+KLTA H A+ NGG FLYV +N++V P
Sbjct: 112 KGVIFTDILTAAREHSDLVEKYFMKDGVKVDEHKLTALHAALVNGGAFLYVPKNVQVETP 171
Query: 182 LHLFFLIQESSLAQAPHIIIIAEKNSEVHLIEGCTAPILVRHSLHLDMTEAYIHDGAKVR 241
+ ++ + + A H++I+AE +S V +E + + + ++ ++E D A V
Sbjct: 172 VQAVYVHESNDTALFNHVLIVAEDHSSVTYVENYISTVNPKDAVFNIISEVITGDNASVT 231
Query: 242 LTVLQNWPEYVHTRPMTR-AKVGKNAEFLNTTVSLGAGKSNIANPKYWVEEGGHVELNGV 300
+ N V T R A G++++ + G + N +G + + V
Sbjct: 232 YGAVDNLSSGVTTYVNRRGAARGRDSKIEWALGLMNDGDTISENTTNLYGDGTYGDTKTV 291
Query: 301 ILGQKDWYIDLGGEMYLQGKGASGLNSSKAVIMDKSSVITRG--KIIAEAKKTKGHISCD 358
++G+ + + ++ GK + G V+ D +S I G KI A K
Sbjct: 292 VVGRGEQTENFTTQIIHFGKASEGYILKHGVMKDSASSIFNGIGKIEHGASKANAEQESR 351
Query: 359 ALLLSDKARMETYPGLVSLVDEAELSHEAAIGKIREEELFYLMSRGLTEEKATQLIVKGF 418
L+LS+KAR + P L+ D+ H A++G++ +L+YLMSRG+ +E+A +L++ GF
Sbjct: 352 VLMLSEKARGDANPILLIDEDDVTAGHAASVGRVDPIQLYYLMSRGIPKEEAERLVIYGF 411
Query: 419 VEPMLKDIPIEFV-VEIKKIIELAV 442
+ P++ ++PIE V ++ +IE V
Sbjct: 412 LAPVVNELPIEGVKKQLVSVIERKV 436
>gi|11499942 conserved hypothetical protein [Archaeoglobus fulgidus]
>gi|6686231|sp|O30305|YN65_ARCFU HYPOTHETICAL PROTEIN
AF2365 >gi|7429546|pir||E69545 conserved hypothetical
protein AF2365 - Archaeoglobus fulgidus
>gi|2650732|gb|AAB91300.1| (AE001113) conserved
hypothetical protein [Archaeoglobus fulgidus]
Length = 369
Score = 172 bits (432), Expect = 6e-42
Identities = 111/359 (30%), Positives = 187/359 (51%), Gaps = 11/359 (3%)
Query: 84 KALLDRLGISEVEQKYIAGLAVQTDTGV-IYNQFLQEWAKKGLIVLPTEEAIRKYPDIMK 142
K L +GI E+++ +G+ +Q D ++ F + G+ V+ ++A+ KY D +K
Sbjct: 16 KERLKEVGI-ELDKSKRSGVYLQEDQDAKTFSSFFE-----GVEVMSIKQAMEKY-DWVK 68
Query: 143 QHFLKLFKAGENKLTAYHTAVWNGGIFLYVKENLKVPFPLHLFFLIQESSLAQAPHIIII 202
+F K+ + +++ T G F+ KV P+ +++ Q H I+I
Sbjct: 69 DYFWKILRKDQDEFTRMADTEDVNGYFIRSLPGAKVEIPVEACLYLKKVE-KQRVHNIVI 127
Query: 203 AEKNSEVHLIEGCTAPILVRHSLHLDMTEAYIHDGAKVRLTVLQNWPEYVHTRPMTRAKV 262
AE+ SE+++I GCT+ V +H+ ++E ++ AK+ T++ +W + RP T KV
Sbjct: 128 AEEGSELNIISGCTSHPGVA-GMHIGISEFFVKKNAKLSFTMIHSWDTTIEVRPRTAIKV 186
Query: 263 GKNAEFLNTTVSLGAGKSNIANPKYWVEEGGHVELNGVILGQKDWYIDLGGEMYLQGKGA 322
+ F++ + L K P +VE+ N VI+ + +D G L G+ +
Sbjct: 187 EEGGTFISNYILLNPVKLVQTYPTAYVEKDATAIFNSVIVALEGSVVDSGSRAVLMGENS 246
Query: 323 SGLNSSKAVIMDKSSVITRGKIIAEAKKTKGHISCDALLLSDKARMETYPGLVSLVDEAE 382
S+ I +I RG II +A + KGH+ C L+LS+ ++ P L + E
Sbjct: 247 RAEIISRT-ISKGGKIIARGHIIGDAPEVKGHLECKGLMLSESGLIDAIPELEARYPNVE 305
Query: 383 LSHEAAIGKIREEELFYLMSRGLTEEKATQLIVKGFVEPMLKDIPIEFVVEIKKIIELA 441
LSHEAAIGKI EE +FYLMSRGL+ ++A IV+GF+E +K +P I++ IE+A
Sbjct: 306 LSHEAAIGKIAEEGIFYLMSRGLSRDEAISAIVRGFMEIEIKGLPEALQEAIRRTIEMA 364
>pir||G81745 conserved hypothetical protein TC0056 [imported] - Chlamydia
muridarum (strain Nigg) >gi|7190094|gb|AAF38943.1|
(AE002273) conserved hypothetical protein [Chlamydia
muridarum]
Length = 483
Score = 169 bits (424), Expect = 5e-41
Identities = 128/462 (27%), Positives = 215/462 (45%), Gaps = 32/462 (6%)
Query: 10 ARSIIENQIEELAKRNKEPEWMTKIRYRA------LEEFMRAPLGDPIISEEKLLNFIAK 63
A I E IE L EP+++ R +A +EE A L IS ++++ F A
Sbjct: 28 APGISEEHIERLVHLRGEPKFLLDFRLKAFRLWQKMEEPKWARLHYAPISYDEMVYFSAP 87
Query: 64 PEIEGIPDKIESLDDLPPEMKALLDRLGISEVEQKYI-----AGLAVQTDTGVIYNQFLQ 118
+ + L+D PE+ RLGI EQK + + + D+ I F +
Sbjct: 88 KSKK----PLGKLEDADPELLETFKRLGIPIDEQKRLLNVQDVAMDLVFDSVSIGTTFKK 143
Query: 119 EWAKKGLIVLPTEEAIRKYPDIMKQHFLKLFKAGENKLTAYHTAVWNGGIFLYVKENLKV 178
+ G+I EAI YPD++K++ + A +N A ++AV++ G F+Y+ + ++
Sbjct: 144 TLEEAGVIFCSLREAIHNYPDLVKRYLGSVVPARDNFFAALNSAVFSDGSFVYIPKGVRC 203
Query: 179 PFPLHLFFLIQESSLAQAPHIIIIAEKNSEVHLIEGCTAPILVRHSLHLDMTEAYIHDGA 238
P + +F I + Q +IIAE ++ V +EGCTAP H LH + E ++ +
Sbjct: 204 PMEISTYFRINDKESGQFERTLIIAEDDAYVSYLEGCTAPAFSSHQLHAAVVELIANNRS 263
Query: 239 KVRLTVLQNW------------PEYVHTRPMTRAKVGKNAEFLNTTVSLGAGKSNIANPK 286
+R + +QNW +V R + GK ++ + V +GA +
Sbjct: 264 TIRYSTVQNWYPGDRNTGEGGIYNFVTKRGLC---AGKQSKISWSQVEVGAAITWKYPSC 320
Query: 287 YWVEEGGHVELNGVILGQKDWYIDLGGEMYLQGKGASGLNSSKAVIMDKSSVITRG--KI 344
E E + L D G +M GKG+S SK + D+S R I
Sbjct: 321 ILRGENSVGEFYSIALTNGKMQADTGTKMLHIGKGSSSTIVSKGISADESHNTFRSLVSI 380
Query: 345 IAEAKKTKGHISCDALLLSDKARMETYPGLVSLVDEAELSHEAAIGKIREEELFYLMSRG 404
+A + + CD++L+ + T P ++ E+ + HEAA K+REE+LFYL SRG
Sbjct: 381 SPQAVGSCNYTQCDSMLVGELCGAYTDPQILVHNGESCVEHEAATSKLREEQLFYLRSRG 440
Query: 405 LTEEKATQLIVKGFVEPMLKDIPIEFVVEIKKIIELAVSGGL 446
E+A L+V GF + +++ +P+EF E K++ + + +
Sbjct: 441 FDTEEAVSLVVHGFCKEVIELLPLEFAREATKLLMIKLENSV 482
>pir||H71482 probable ABC transporter - Chlamydia trachomatis (serotype D,
strain UW3/Cx) >gi|3329137|gb|AAC68279.1| (AE001339) ABC
Transporter [Chlamydia trachomatis]
Length = 483
Score = 168 bits (422), Expect = 9e-41
Identities = 128/461 (27%), Positives = 217/461 (46%), Gaps = 30/461 (6%)
Query: 10 ARSIIENQIEELAKRNKEPEWMTKIRYRA------LEEFMRAPLGDPIISEEKLLNFIAK 63
A I + IE+L EP+++ R +A +EE A L P I+ + ++ F A
Sbjct: 28 APGISQEHIEQLVHLRGEPKFLLDFRLKAFRFWQKMEEPTWARLRYPPIAYDDIVYFSA- 86
Query: 64 PEIEGIPDKIESLDDLPPEMKALLDRLGISEVEQKYI-----AGLAVQTDTGVIYNQFLQ 118
P+ + K+E D PE+ +LGI EQK + + + D+ I F +
Sbjct: 87 PKTKKPLGKLEDAD---PEILETFKKLGIPIDEQKRLLNVQDVAMDLVFDSVSIGTTFKK 143
Query: 119 EWAKKGLIVLPTEEAIRKYPDIMKQHFLKLFKAGENKLTAYHTAVWNGGIFLYVKENLKV 178
G+I EAI YPD++K++ + A +N A ++AV++ G F+Y+ + +
Sbjct: 144 TLEDAGVIFCSFREAIHNYPDLVKRYLGSVVPARDNFFAALNSAVFSDGSFVYIPKGVCC 203
Query: 179 PFPLHLFFLIQESSLAQAPHIIIIAEKNSEVHLIEGCTAPILVRHSLHLDMTEAYIHDGA 238
P + +F I + Q +IIAE +S V +EGCTAP H LH + E H+ +
Sbjct: 204 PMEISTYFRINDKESGQFERTLIIAEDDSYVSYLEGCTAPSFSSHQLHAAVVELVAHNRS 263
Query: 239 KVRLTVLQNWPEYVHTRPMTRAKV-----------GKNAEFLNTTVSLGAGKSNIANPKY 287
+R + +QNW Y R + + G++++ + V +GA +
Sbjct: 264 VIRYSTVQNW--YPGDRKTGKGGIYNFVTKRGLCAGEHSKISWSQVEVGAAITWKYPSCI 321
Query: 288 WVEEGGHVELNGVILGQKDWYIDLGGEMYLQGKGASGLNSSKAVIMDKSSVITRG--KII 345
E E + L D G +M GKG+S SK + ++S R I
Sbjct: 322 LKGENSVGEFYSIALTNGKMQADTGTKMLHIGKGSSSTIVSKGISAEESHNTFRSLVSIS 381
Query: 346 AEAKKTKGHISCDALLLSDKARMETYPGLVSLVDEAELSHEAAIGKIREEELFYLMSRGL 405
++A + + CD++L+ + T P +V E+ + HEAA K+RE++LFYL SRG
Sbjct: 382 SQAVGSCNYTQCDSMLVGEHCGAYTDPQIVVNNGESCVEHEAATSKLREDQLFYLRSRGF 441
Query: 406 TEEKATQLIVKGFVEPMLKDIPIEFVVEIKKIIELAVSGGL 446
E+A L+V GF +++ +P+EF E K++ + + +
Sbjct: 442 NTEEAVSLVVHGFCREVIELLPLEFAREATKLLMIKLENSV 482
>sp|Q49689|YE61_MYCLE HYPOTHETICAL 95.7 KDA PROTEIN B1496_C2_189 >gi|2145939|pir||S72760
pps1 protein - Mycobacterium leprae
>gi|466882|gb|AAA17127.1| (U00013) pps1; B1496_C2_189
[Mycobacterium leprae]
Length = 869
Score = 167 bits (418), Expect = 3e-40
Identities = 96/284 (33%), Positives = 150/284 (52%), Gaps = 10/284 (3%)
Query: 169 FLYVKENLKVPFPLHLFFLIQESSLAQAPHIIIIAEKNSEVHLIEGCTAPILVRHSLHLD 228
F+YV + V PL +F I ++ Q +IIA+ S VH +EGCTAPI SLH
Sbjct: 589 FIYVPPGVHVDIPLQAYFRINTENMGQFERTLIIADTGSYVHYVEGCTAPIYKSDSLHSA 648
Query: 229 MTEAYIHDGAKVRLTVLQNWPEYVHTRPMTRAKV--GKNAEFLNTTVSLGAGKSNIANPK 286
+ E + A+VR T +QNW V+ RA+V G E+++ + K + P
Sbjct: 649 VVEIIVKPHARVRYTTIQNWSNNVYNLVTKRARVETGATMEWIDGNIG---SKVTMKYPA 705
Query: 287 YWVEEGGHV--ELNGVILGQKDWYIDLGGEMYLQGKGASGLNSSKAVIMDKSSVITRGKI 344
W+ G H E+ V + + D G +M S SK+V RG +
Sbjct: 706 VWMT-GEHAKGEVLSVAFAGEGQHQDTGAKMLHLASNTSSNIVSKSVARGGGRTSYRGLV 764
Query: 345 IAE--AKKTKGHISCDALLLSDKARMETYPGLVSLVDEAELSHEAAIGKIREEELFYLMS 402
A ++ + CDALL+ +R +TYP + D+ + HEA + K+ E +LFYLMS
Sbjct: 765 QVNKGAHGSRSSVKCDALLVDTISRSDTYPYVDIREDDVTMGHEATVSKVSENQLFYLMS 824
Query: 403 RGLTEEKATQLIVKGFVEPMLKDIPIEFVVEIKKIIELAVSGGL 446
RGL E++A ++V+GFVEP+ K++P+E+ +E+ ++IEL + G +
Sbjct: 825 RGLAEDEAMAMVVRGFVEPIAKELPMEYALELNRLIELQMEGAV 868
Score = 106 bits (261), Expect = 7e-22
Identities = 57/163 (34%), Positives = 96/163 (57%), Gaps = 11/163 (6%)
Query: 11 RSIIENQIEELAKRNKEPEWMTKIRYRALEEFMRAPL---GDPI--ISEEKLLNFIAKPE 65
R + E+ + +++ + EPEWM + R +AL F R P+ G + I + + F+ E
Sbjct: 44 RGLSEDVVRDISAKKDEPEWMLQARLKALRVFERKPMPRWGSNLDGIDFDNIKYFVRSTE 103
Query: 66 IEGIPDKIESLDDLPPEMKALLDRLGISEVE-QKYIAGLAVQTDTGVIYNQFLQEWAKKG 124
+ S D+LP +++ DRLGI + E Q+ +AG+A Q ++ V+Y+Q + +G
Sbjct: 104 KQAA-----SWDELPEDIRNTYDRLGIPDAEKQRLVAGVAAQYESEVVYHQIRADLKDQG 158
Query: 125 LIVLPTEEAIRKYPDIMKQHFLKLFKAGENKLTAYHTAVWNGG 167
++ L TE +R+YPDI KQ+ + AG+NK +A +TAVW+GG
Sbjct: 159 VVFLDTETGLREYPDIFKQYLGTVIPAGDNKFSALNTAVWSGG 201
>emb|CAB16171.1| (Z99125) hypothetical protein MLCL536.28c [Mycobacterium leprae]
Length = 869
Score = 167 bits (418), Expect = 3e-40
Identities = 96/284 (33%), Positives = 150/284 (52%), Gaps = 10/284 (3%)
Query: 169 FLYVKENLKVPFPLHLFFLIQESSLAQAPHIIIIAEKNSEVHLIEGCTAPILVRHSLHLD 228
F+YV + V PL +F I ++ Q +IIA+ S VH +EGCTAPI SLH
Sbjct: 589 FIYVPPGVHVDIPLQAYFRINTENMGQFERTLIIADTGSYVHYVEGCTAPIYKSDSLHSA 648
Query: 229 MTEAYIHDGAKVRLTVLQNWPEYVHTRPMTRAKV--GKNAEFLNTTVSLGAGKSNIANPK 286
+ E + A+VR T +QNW V+ RA+V G E+++ + K + P
Sbjct: 649 VVEIIVKPHARVRYTTIQNWSNNVYNLVTKRARVETGATMEWIDGNIG---SKVTMKYPA 705
Query: 287 YWVEEGGHV--ELNGVILGQKDWYIDLGGEMYLQGKGASGLNSSKAVIMDKSSVITRGKI 344
W+ G H E+ V + + D G +M S SK+V RG +
Sbjct: 706 VWMT-GEHAKGEVLSVAFAGEGQHQDTGAKMLHLASNTSSNIVSKSVARGGGRTSYRGLV 764
Query: 345 IAE--AKKTKGHISCDALLLSDKARMETYPGLVSLVDEAELSHEAAIGKIREEELFYLMS 402
A ++ + CDALL+ +R +TYP + D+ + HEA + K+ E +LFYLMS
Sbjct: 765 QVNKGAHGSRSSVKCDALLVDTISRSDTYPYVDIREDDVTMGHEATVSKVSENQLFYLMS 824
Query: 403 RGLTEEKATQLIVKGFVEPMLKDIPIEFVVEIKKIIELAVSGGL 446
RGL E++A ++V+GFVEP+ K++P+E+ +E+ ++IEL + G +
Sbjct: 825 RGLAEDEAMAMVVRGFVEPIAKELPMEYALELNRLIELQMEGAV 868
Score = 106 bits (261), Expect = 7e-22
Identities = 57/163 (34%), Positives = 96/163 (57%), Gaps = 11/163 (6%)
Query: 11 RSIIENQIEELAKRNKEPEWMTKIRYRALEEFMRAPL---GDPI--ISEEKLLNFIAKPE 65
R + E+ + +++ + EPEWM + R +AL F R P+ G + I + + F+ E
Sbjct: 44 RGLSEDVVRDISAKKDEPEWMLQARLKALRVFERKPMPRWGSNLDGIDFDNIKYFVRSTE 103
Query: 66 IEGIPDKIESLDDLPPEMKALLDRLGISEVE-QKYIAGLAVQTDTGVIYNQFLQEWAKKG 124
+ S D+LP +++ DRLGI + E Q+ +AG+A Q ++ V+Y+Q + +G
Sbjct: 104 KQAA-----SWDELPEDIRNTYDRLGIPDAEKQRLVAGVAAQYESEVVYHQIRADLKDQG 158
Query: 125 LIVLPTEEAIRKYPDIMKQHFLKLFKAGENKLTAYHTAVWNGG 167
++ L TE +R+YPDI KQ+ + AG+NK +A +TAVW+GG
Sbjct: 159 VVFLDTETGLREYPDIFKQYLGTVIPAGDNKFSALNTAVWSGG 201
>pir||C64926 ynhE protein - Escherichia coli >gi|1742763|dbj|BAA15454.1|
(D90811) ORF_ID:o320#13; similar to [SwissProt Accession
Number P48260] [Escherichia coli]
>gi|1742770|dbj|BAA15460.1| (D90812) ORF_ID:o320#13;
similar to [SwissProt Accession Number P48260]
[Escherichia coli] >gi|1787973|gb|AAC74753.1| (AE000263)
orf, hypothetical protein [Escherichia coli K12]
Length = 508
Score = 166 bits (415), Expect = 6e-40
Identities = 117/460 (25%), Positives = 210/460 (45%), Gaps = 31/460 (6%)
Query: 10 ARSIIENQIEELAKRNKEPEWMTKIRYRALEEFMRAPLGDPIISEEKLLNF-----IAKP 64
A+ I E + ++ + EPEWM + R A ++ + + LN+ + P
Sbjct: 48 AKGINEEVVRAISAKRNEPEWMLEFRLNAYRAWLEMEEPHWLKAHYDKLNYQDYSYYSAP 107
Query: 65 EIEGIPDKIESLDD----------LPPEMKALLDRLGISEVEQKYIAGLAVQTDTGVIYN 114
D S L E++A ++LG+ E K +A A+ D+ +
Sbjct: 108 SCGNCDDTCASEPGAVQQTGANAFLSKEVEAAFEQLGVPVREGKEVAVDAI-FDSVSVAT 166
Query: 115 QFLQEWAKKGLIVLPTEEAIRKYPDIMKQHFLKLFKAGENKLTAYHTAVWNGGIFLYVKE 174
+ ++ A++G+I EAI +P++++++ + +N A + AV + G F+YV +
Sbjct: 167 TYREKLAEQGIIFCSFGEAIHDHPELVRKYLGTVVPGNDNFFAALNAAVASDGTFIYVPK 226
Query: 175 NLKVPFPLHLFFLIQESSLAQAPHIIIIAEKNSEVHLIEGCTAPILVRHSLHLDMTEAYI 234
++ P L +F I Q I++A+++S V IEGC+AP+ + LH + E I
Sbjct: 227 GVRCPMELSTYFRINAEKTGQFERTILVADEDSYVSYIEGCSAPVRDSYQLHAAVVEVII 286
Query: 235 HDGAKVRLTVLQNW----------PEYVHTRPMTRAKVGKNAEFLNTTVSLGAGKSNIAN 284
H A+V+ + +QNW +V R + G+N++ T G+ +
Sbjct: 287 HKNAEVKYSTVQNWFPGDNNTGGILNFVTKRALCE---GENSKMSWTQSETGSAITWKYP 343
Query: 285 PKYWVEEGGHVELNGVILGQKDWYIDLGGEMYLQGKGASGLNSSKAVIMDKSSVITRG-- 342
+ E V L D G +M GK SK + S RG
Sbjct: 344 SCILRGDNSIGEFYSVALTSGHQQADTGTKMIHIGKNTKSTIISKGISAGHSQNSYRGLV 403
Query: 343 KIIAEAKKTKGHISCDALLLSDKARMETYPGLVSLVDEAELSHEAAIGKIREEELFYLMS 402
KI+ A + CD++L+ T+P + + A+L HEA +I E++LFY +
Sbjct: 404 KIMPTATNARNFTQCDSMLIGANCGAHTFPYVECRNNSAQLEHEATTSRIGEDQLFYCLQ 463
Query: 403 RGLTEEKATQLIVKGFVEPMLKDIPIEFVVEIKKIIELAV 442
RG++EE A +IV GF + + ++P+EF VE +K++ +++
Sbjct: 464 RGISEEDAISMIVNGFCKDVFSELPLEFAVEAQKLLAISL 503
>sp|P77522|YNHE_ECOLI HYPOTHETICAL 54.7 KDA PROTEIN IN LPP-AROD INTERGENIC REGION
Length = 495
Score = 166 bits (415), Expect = 6e-40
Identities = 117/460 (25%), Positives = 210/460 (45%), Gaps = 31/460 (6%)
Query: 10 ARSIIENQIEELAKRNKEPEWMTKIRYRALEEFMRAPLGDPIISEEKLLNF-----IAKP 64
A+ I E + ++ + EPEWM + R A ++ + + LN+ + P
Sbjct: 35 AKGINEEVVRAISAKRNEPEWMLEFRLNAYRAWLEMEEPHWLKAHYDKLNYQDYSYYSAP 94
Query: 65 EIEGIPDKIESLDD----------LPPEMKALLDRLGISEVEQKYIAGLAVQTDTGVIYN 114
D S L E++A ++LG+ E K +A A+ D+ +
Sbjct: 95 SCGNCDDTCASEPGAVQQTGANAFLSKEVEAAFEQLGVPVREGKEVAVDAI-FDSVSVAT 153
Query: 115 QFLQEWAKKGLIVLPTEEAIRKYPDIMKQHFLKLFKAGENKLTAYHTAVWNGGIFLYVKE 174
+ ++ A++G+I EAI +P++++++ + +N A + AV + G F+YV +
Sbjct: 154 TYREKLAEQGIIFCSFGEAIHDHPELVRKYLGTVVPGNDNFFAALNAAVASDGTFIYVPK 213
Query: 175 NLKVPFPLHLFFLIQESSLAQAPHIIIIAEKNSEVHLIEGCTAPILVRHSLHLDMTEAYI 234
++ P L +F I Q I++A+++S V IEGC+AP+ + LH + E I
Sbjct: 214 GVRCPMELSTYFRINAEKTGQFERTILVADEDSYVSYIEGCSAPVRDSYQLHAAVVEVII 273
Query: 235 HDGAKVRLTVLQNW----------PEYVHTRPMTRAKVGKNAEFLNTTVSLGAGKSNIAN 284
H A+V+ + +QNW +V R + G+N++ T G+ +
Sbjct: 274 HKNAEVKYSTVQNWFPGDNNTGGILNFVTKRALCE---GENSKMSWTQSETGSAITWKYP 330
Query: 285 PKYWVEEGGHVELNGVILGQKDWYIDLGGEMYLQGKGASGLNSSKAVIMDKSSVITRG-- 342
+ E V L D G +M GK SK + S RG
Sbjct: 331 SCILRGDNSIGEFYSVALTSGHQQADTGTKMIHIGKNTKSTIISKGISAGHSQNSYRGLV 390
Query: 343 KIIAEAKKTKGHISCDALLLSDKARMETYPGLVSLVDEAELSHEAAIGKIREEELFYLMS 402
KI+ A + CD++L+ T+P + + A+L HEA +I E++LFY +
Sbjct: 391 KIMPTATNARNFTQCDSMLIGANCGAHTFPYVECRNNSAQLEHEATTSRIGEDQLFYCLQ 450
Query: 403 RGLTEEKATQLIVKGFVEPMLKDIPIEFVVEIKKIIELAV 442
RG++EE A +IV GF + + ++P+EF VE +K++ +++
Sbjct: 451 RGISEEDAISMIVNGFCKDVFSELPLEFAVEAQKLLAISL 490
>dbj|BAB07189.1| (AP001518) unknown conserved protein [Bacillus halodurans]
Length = 435
Score = 165 bits (413), Expect = 1e-39
Identities = 118/429 (27%), Positives = 209/429 (48%), Gaps = 19/429 (4%)
Query: 12 SIIENQIEELAKRNKEPEWMTKIRYRALE--EFMRAPLGDPI-ISEEKLLNFIAK-PEIE 67
+I + ++ + EP+W IR + E E + P D I+ NF K PE+
Sbjct: 8 TIDKEYVQSFSDARNEPQWFKDIRLKGFELVETLELPKPDKTKITSWNFTNFDHKLPEVS 67
Query: 68 GIPDKIESLDDLPPEMKALLDRLGISEVEQKYIAGLAVQTDTGVIYNQFLQEWAKKGLIV 127
+ S+D+L E+K L+ ++ L VQ D V+Y++ + KG+I
Sbjct: 68 ----PVASIDELRDEVKGLIGEASDTQ-------NLLVQRDATVVYSKLDEALKAKGVIF 116
Query: 128 LPTEEAIRKYPDIMKQHFLK-LFKAGENKLTAYHTAVWNGGIFLYVKENLKVPFPLHLFF 186
A++++ D+++++++K K EN+LTA H A+ NGG F+YV N+++ PL F
Sbjct: 117 TDLLTAVKEHGDLVEKYYMKDAVKVDENRLTALHAALVNGGTFIYVPRNVEIEVPLQSVF 176
Query: 187 LIQESSLAQAPHIIIIAEKNSEVHLIEGCTAPILVRHSLHLDMTEAYIHDGAKVRLTVLQ 246
H+II+AE NS + +E A ++ + E + AKV +
Sbjct: 177 WFDTEKAGLFNHVIIVAEDNSSITYVENY-ASFGSEEAVANIVVEVFAGANAKVSFGAVD 235
Query: 247 NWPEYVHTRPMTRAKVGKNAEFLNTTVSLGAGKSNIANPKYWVEEGGHVELNGVILGQKD 306
N V T + RA VG+++ + G + N + + + + V +G+ +
Sbjct: 236 NLAAGVTTYVVRRAHVGRDSRVEWALGQMNDGNTVSENTTHLLGDNSWADTKTVSVGRGE 295
Query: 307 WYIDLGGEMYLQGKGASGLNSSKAVIMDKSSVITRG--KIIAEAKKTKGHISCDALLLSD 364
+ +++ GK + G V+ + ++ I G KI A K+ G + L+LS+
Sbjct: 296 QKQNFTTQIFHHGKHSEGYILKHGVMREAATSIFNGISKIEHGATKSHGEQTERVLMLSE 355
Query: 365 KARMETYPGLVSLVDEAELSHEAAIGKIREEELFYLMSRGLTEEKATQLIVKGFVEPMLK 424
KAR + P L+ D+ H A++GKI ++FYLMSRG++ +A +L++ GF+ P++
Sbjct: 356 KARGDANPILLIDEDDVTAGHAASVGKIDPIQMFYLMSRGISRAEAERLVIHGFLAPVVG 415
Query: 425 DIPIEFVVE 433
+PIE V E
Sbjct: 416 QLPIESVKE 424
>emb|CAC17125.1| (AJ301654) SufB protein [Pectobacterium chrysanthemi]
Length = 499
Score = 164 bits (410), Expect = 2e-39
Identities = 117/461 (25%), Positives = 211/461 (45%), Gaps = 29/461 (6%)
Query: 10 ARSIIENQIEELAKRNKEPEWMTKIRYRALEEFMRAPLGDPIISEEKLLNF-----IAKP 64
A I E+ + ++ R EPEWM + R A +++ + + + LN+ + P
Sbjct: 35 AHGINEDVVRAISARRNEPEWMLEFRLSAYRAWLQMEEPHWLKAHYERLNYQDYSYYSAP 94
Query: 65 EIEGIPDKIESLDD--------------LPPEMKALLDRLGISEVEQKYIAGLAVQTDTG 110
D S L E++ D+LG+ E K +A A+ D+
Sbjct: 95 SCGQCDDSCGSQPGAQQQPAGDAAHGNYLTREVEDAFDKLGVPVREGKDVAVDAI-FDSV 153
Query: 111 VIYNQFLQEWAKKGLIVLPTEEAIRKYPDIMKQHFLKLFKAGENKLTAYHTAVWNGGIFL 170
+ + E A++G+I EAI+ +P++++Q+ + A +N A + AV + G F+
Sbjct: 154 SVATTYRDELAQQGIIFCSFSEAIQAHPELVRQYLGTVVPANDNFFAALNAAVASDGTFV 213
Query: 171 YVKENLKVPFPLHLFFLIQESSLAQAPHIIIIAEKNSEVHLIEGCTAPILVRHSLHLDMT 230
Y+ + ++ P L +F I + Q I+IA+ +S V IEGC+AP+ + LH +
Sbjct: 214 YIPKGVRCPMELSTYFRINAAKTGQFERTILIADDDSYVSYIEGCSAPVRDSYQLHAAVV 273
Query: 231 EAYIHDGAKVRLTVLQNWPEYVHTRPMTRAKVGKNAEFLNTTVSLGAGKSNIANPKYW-- 288
E ++ A+V+ + +QNW + V K A + +S + W
Sbjct: 274 EVIVNKNAEVKYSTVQNWFAGQGSESGILNFVTKRALCAGDHSRMSWTQSETGSAITWKY 333
Query: 289 ---VEEGGHV--ELNGVILGQKDWYIDLGGEMYLQGKGASGLNSSKAVIMDKSSVITRG- 342
+ G + E V L D G +M GK +K + S RG
Sbjct: 334 PSVILRGDYSVGEFFSVALTSGHQQADTGTKMIHIGKNTRSTIIAKGISAGHSENTYRGL 393
Query: 343 -KIIAEAKKTKGHISCDALLLSDKARMETYPGLVSLVDEAELSHEAAIGKIREEELFYLM 401
KI++ A + CD++L+ T+P + + A+L HEA +I E++LFY +
Sbjct: 394 VKIMSSATNARNFTQCDSMLIGGDCGAHTFPYVEVRNNSAQLEHEATTSRIGEDQLFYCL 453
Query: 402 SRGLTEEKATQLIVKGFVEPMLKDIPIEFVVEIKKIIELAV 442
RG++E+ A +IV GF + + ++P+EF VE +K++ +++
Sbjct: 454 QRGISEDDAISMIVNGFCKDVFSELPLEFAVEAQKLLSISL 494
>gi|11465463 unknown [Cyanidium caldarium] >gi|6466366|gb|AAF12948.1|AF022186_71
(AF022186) unknown [Cyanidium caldarium]
Length = 483
Score = 162 bits (405), Expect = 9e-39
Identities = 119/456 (26%), Positives = 214/456 (46%), Gaps = 26/456 (5%)
Query: 11 RSIIENQIEELAKRNKEPEWMTKIRYRALEEF--MRAPLGDPIISEEKLLNFI---AKPE 65
+ I E I ++ + +EP+++ K R +A + + M+AP + E N + A P+
Sbjct: 33 KGINEEIIRLMSHKKQEPDFILKFRLKAYQIWKKMQAPDWGHLHHNEINFNDVLCYASPK 92
Query: 66 IEGIPDKIESLDDLPPEMKALLDRLGISEVEQKYIAGLAVQT--DTGVIYNQFLQEWAKK 123
+E +K +++ + E+ A ++LG+ +AV D+ +E ++
Sbjct: 93 LEQGKNKAQTISE---EILATFEKLGVPIKPNNKQPKIAVDAVFDSISFGTTLQKELKEQ 149
Query: 124 GLIVLPTEEAIRKYPDIMKQHFLKLFKAGENKLTAYHTAVWNGGIFLYVKENLKVPFPLH 183
G+I EAI+ YP+++K++ + AG+N A ++AV+ G F Y+ +N++ P L
Sbjct: 150 GIIFCSISEAIKAYPNLIKKYLGSIVPAGDNYFAALNSAVFTDGSFCYIPKNIRCPVDLS 209
Query: 184 LFFLIQESSLAQAPHIIIIAEKNSEVHLIEGCTAPILVRHSLHLDMTEAYIHDGAKVRLT 243
+F I Q +IIA++NS V+ +EGCTAP + LH + E A + +
Sbjct: 210 TYFRINNKEAGQFERTLIIADENSFVNYLEGCTAPQFDTNQLHAAVVELICFKNATINYS 269
Query: 244 VLQNW-----------PEYVHTRPMTRAKVGKNAEFLNTTVSLGAGKSNIANPKYWVEEG 292
+QNW +V R + + G+N++ T + G+ + +
Sbjct: 270 TVQNWYAGNNKGEGGVYNFVTKRGLCQ---GENSKISWTQLETGSAITWKYPSCLLKGKR 326
Query: 293 GHVELNGVILGQKDWYIDLGGEMYLQGKGASGLNSSKAVIMDKSSVITRG--KIIAEAKK 350
E V L D G +M G+ + L SK + S RG KI A
Sbjct: 327 STGEFFSVTLTNNAQEADTGTKMLHFGRQSKSLVISKGISGGVSKNTYRGLVKISGSAIY 386
Query: 351 TKGHISCDALLLSDKARMETYPGLVSLVDEAELSHEAAIGKIREEELFYLMSRGLTEEKA 410
+ CD+LL+ + TYP L +++ HEA + +I EE++FY RG+ E+A
Sbjct: 387 SDNRSQCDSLLIGKGSESNTYPNLHVHNSLSKVEHEAFVSRIGEEQIFYFQQRGINIEEA 446
Query: 411 TQLIVKGFVEPMLKDIPIEFVVEIKKIIELAVSGGL 446
+IV GF + + +P+EF +E K++ + + G +
Sbjct: 447 LNMIVSGFCQDVCNKLPMEFALEANKLLNIKLEGSI 482
>pir||B72048 ABC transporter - Chlamydophila pneumoniae (strains CWL029 and
AR39) >gi|4376994|gb|AAD18831.1| (AE001651) ABC
Transporter [Chlamydophila pneumoniae CWL029]
>gi|7188992|gb|AAF37945.1| (AE002169) conserved
hypothetical protein [Chlamydophila pneumoniae AR39]
>gi|8979064|dbj|BAA98899.1| (AP002547) ABC transporter
[Chlamydophila pneumoniae J138]
Length = 484
Score = 156 bits (391), Expect = 4e-37
Identities = 127/462 (27%), Positives = 214/462 (45%), Gaps = 50/462 (10%)
Query: 11 RSIIENQIEELAKRNKEPEWMTKIRYRA------LEEFMRAPLGDPIISEEKLLNFIAKP 64
R + E IEE+A EP+++ R +A L E A L I+ + ++ F +
Sbjct: 30 RGLSEETIEEIAALRNEPQFIIDFRLQAYRYWKQLHEPAWARLHYGPIAYDDIVYFSSPK 89
Query: 65 EIEGIPDKIESLDDLPPEMKALLDRLGISEVEQKY---IAGLAVQT--DTGVIYNQFLQE 119
+ + + L+D PE+ +LGI EQK + +AV D+ I F +
Sbjct: 90 QKK----PLGRLEDADPEILDTFKKLGIPLDEQKRLLNVENVAVDLVFDSVSIGTTFKEA 145
Query: 120 WAKKGLIVLPTEEAIRKYPDIMKQHFLKLFKAGENKLTAYHTAVWNGGIFLYVKENLKVP 179
K G+I EAI+++P+++K++ + +N A + AV++ G F+YV + +K P
Sbjct: 146 LEKAGVIFCSLGEAIQEHPNLVKKYLGSVVSHRDNFFAALNAAVFSDGSFVYVPKGVKCP 205
Query: 180 FPLHLFFLIQESSLAQAPHIIIIAEKNSEVHLIEGCTAPILVRHSLHLDMTEAYIHDGAK 239
+ +F I Q +I+ E +EGCTAP + LH + E H+ A
Sbjct: 206 MDISTYFRINNKEAGQFERTLIVVEDGGYASYLEGCTAPAYSSNQLHAAVVELVAHEHAV 265
Query: 240 VRLTVLQNWPEYVHTRPMTRAKVGKNAEF-LNTTVSLGAG-KSNIANPKYWVEEGGHV-- 295
+R + +QNW Y + K GK + T L AG +S I+ + VE G +
Sbjct: 266 IRYSTVQNW--YAGDK-----KTGKGGIYNFVTKRGLCAGYRSKISWSQ--VEVGAAITW 316
Query: 296 --------------ELNGVILGQKDWYIDLGGEMYLQGKGASGLNSSKAVIMDKS----- 336
E V L D G +M GK + SK + D+S
Sbjct: 317 KYPSCILKGDESVGEFYSVALTSGKMQADTGTKMLHVGKRTTSTVISKGISSDESKNTFR 376
Query: 337 SVITRGKIIAEAKKTKGHISCDALLLSDKARMETYPGLVSLVDEAELSHEAAIGKIREEE 396
S+++ GK +A+ + + CD++L+ + T P +V + + HEA K+RE++
Sbjct: 377 SLVSLGK---KAEHSSNYTQCDSMLIGKASGAYTDPKIVVENSTSSIEHEATTSKLREDQ 433
Query: 397 LFYLMSRGLTEEKATQLIVKGFVEPMLKDIPIEFVVEIKKII 438
L YL SRGL+ E+A L++ GF +++ +P+EF E K++
Sbjct: 434 LLYLRSRGLSPEEAVSLVIHGFCREIIEQLPLEFAQEASKLL 475
>sp|O53152|YE61_MYCTU HYPOTHETICAL 94.2 KDA PROTEIN RV1461 >gi|7476777|pir||H70871
hypothetical protein Rv1461 - Mycobacterium tuberculosis
(strain H37RV) >gi|2791395|emb|CAA15991.1| (AL021184)
hypothetical protein Rv1461 [Mycobacterium tuberculosis]
Length = 846
Score = 142 bits (354), Expect = 9e-33
Identities = 75/211 (35%), Positives = 124/211 (58%), Gaps = 11/211 (5%)
Query: 11 RSIIENQIEELAKRNKEPEWMTKIRYRALEEFMRAPL---GDPI--ISEEKLLNFIAKPE 65
R + E + +++ + EP+WM + R +AL F R P+ G + I + + F+ E
Sbjct: 48 RGLSEAVVRDISAKKNEPDWMLQSRLKALRIFDRKPIPKWGSNLDGIDFDNIKYFVRSTE 107
Query: 66 IEGIPDKIESLDDLPPEMKALLDRLGISEVE-QKYIAGLAVQTDTGVIYNQFLQEWAKKG 124
+ S DDLP +++ DRLGI E E Q+ +AG+A Q ++ V+Y+Q ++ +G
Sbjct: 108 KQAA-----SWDDLPEDIRNTYDRLGIPEAEKQRLVAGVAAQYESEVVYHQIREDLEAQG 162
Query: 125 LIVLPTEEAIRKYPDIMKQHFLKLFKAGENKLTAYHTAVWNGGIFLYVKENLKVPFPLHL 184
+I L T+ +R++PDI K++F + AG+NK +A +TAVW+GG F+YV + V PL
Sbjct: 163 VIFLDTDTGLREHPDIFKEYFGTVIPAGDNKFSALNTAVWSGGSFIYVPPGVHVDIPLQA 222
Query: 185 FFLIQESSLAQAPHIIIIAEKNSEVHLIEGC 215
+F I ++ Q +IIA++ S VH +EGC
Sbjct: 223 YFRINTENMGQFERTLIIADEGSYVHYVEGC 253
Score = 138 bits (345), Expect = 1e-31
Identities = 80/241 (33%), Positives = 127/241 (52%), Gaps = 10/241 (4%)
Query: 212 IEGCTAPILVRHSLHLDMTEAYIHDGAKVRLTVLQNWPEYVHT--RPMTRAKVGKNAEFL 269
+ CTAPI SLH + E + A+VR T +QNW V+ RA+ G E++
Sbjct: 609 VHNCTAPIYKSDSLHSAVVEIIVKPHARVRYTTIQNWSNNVYNLVTKRARAEAGATMEWI 668
Query: 270 NTTVSLGAGKSNIANPKYWVEEGGHV--ELNGVILGQKDWYIDLGGEMYLQGKGASGLNS 327
+ + K + P W+ G H E+ V +D + D G +M S
Sbjct: 669 DGNIG---SKVTMKYPAVWMT-GEHAKGEVLSVAFAGEDQHQDTGAKMLHLAPNTSSNIV 724
Query: 328 SKAVIMDKSSVITRGKIIAE--AKKTKGHISCDALLLSDKARMETYPGLVSLVDEAELSH 385
SK+V RG + A ++ + CDALL+ +R +TYP + D+ + H
Sbjct: 725 SKSVARGGGRTSYRGLVQVNKGAHGSRSSVKCDALLVDTVSRSDTYPYVDIREDDVTMGH 784
Query: 386 EAAIGKIREEELFYLMSRGLTEEKATQLIVKGFVEPMLKDIPIEFVVEIKKIIELAVSGG 445
EA + K+ E +LFYLMSRGLTE++A ++V+GFVEP+ K++P+E+ +E+ ++IEL + G
Sbjct: 785 EATVSKVSENQLFYLMSRGLTEDEAMAMVVRGFVEPIAKELPMEYALELNRLIELQMEGA 844
Query: 446 L 446
+
Sbjct: 845 V 845
>sp|Q02857|YC24_ANTSP HYPOTHETICAL PROTEIN IN ATPA 3'REGION (ORF 3)
>gi|629427|pir||S37636 hypothetical protein 3 (atpA 3'
region) - red alga (Antithamnion sp.) chloroplast
(fragment) >gi|14179|emb|CAA44986.1| (X63382) ORF3
[Antithamnion sp.]
Length = 297
Score = 131 bits (326), Expect = 2e-29
Identities = 84/297 (28%), Positives = 141/297 (47%), Gaps = 16/297 (5%)
Query: 161 TAVWNGGIFLYVKENLKVPFPLHLFFLIQESSLAQAPHIIIIAEKNSEVHLIEGCTAPIL 220
+A ++ G F Y+ + P L +F I Q +IIA+KNS V +EGCTAP
Sbjct: 1 SATFSHGSFCYIPPDTHCPLELSTYFRINNKESGQFERTLIIADKNSYVSYLEGCTAPQF 60
Query: 221 VRHSLHLDMTEAYIHDGAKVRLTVLQNWP-----------EYVHTRPMTRAKVGKNAEFL 269
+ LH + E + A ++ + +QNW +V R + +G N++ L
Sbjct: 61 DNNQLHAAVVELVALENATIKYSTVQNWYAGNEKGQGGIYNFVTKRGIC---IGNNSKIL 117
Query: 270 NTTVSLGAGKSNIANPKYWVEEGGHVELNGVILGQKDWYIDLGGEMYLQGKGASGLNSSK 329
T V G+ + E + + L D G +M GK SK
Sbjct: 118 WTQVETGSAITWKYPSCILAGHNSIGEFSSIALTNNYQQADTGSKMIHIGKNTKSRILSK 177
Query: 330 AVIMDKSSVITRG--KIIAEAKKTKGHISCDALLLSDKARMETYPGLVSLVDEAELSHEA 387
+ S+ RG KI +A ++ + CD+LLLS+ ++ T+P + + ++ HEA
Sbjct: 178 GISAGYSANSYRGLVKIGPKAHYSRNYSQCDSLLLSNTSKANTFPYIQAQNPYTKIEHEA 237
Query: 388 AIGKIREEELFYLMSRGLTEEKATQLIVKGFVEPMLKDIPIEFVVEIKKIIELAVSG 444
+ KI EE++FY + RG+ E A L++ GF + +L ++P+EF VE +++ L + G
Sbjct: 238 STSKIGEEQIFYFLQRGINLENAISLMISGFCKEVLNELPMEFAVEADRLLNLKLEG 294
>pir||C75316 conserved hypothetical protein - Deinococcus radiodurans (strain
R1) >gi|6459895|gb|AAF11649.1|AE002045_9 (AE002045)
conserved hypothetical protein [Deinococcus radiodurans]
Length = 450
Score = 113 bits (280), Expect = 4e-24
Identities = 102/433 (23%), Positives = 182/433 (41%), Gaps = 36/433 (8%)
Query: 28 PEWMTKIRYRALEEFMRAPLGDPIISEEKLLNFIAKPEIEGIPDKIESLDDLPPEMKALL 87
PEW+T R + L+ F + + K + K E+ D ++
Sbjct: 14 PEWLTAKRQQGLDLFTSLDVPTEGVEAWKYTRVDVDFDALNPHPKREATTDTTKLPASVQ 73
Query: 88 DRLGISEVEQKYIAGLAVQTDTGVIYNQFLQ-EWAKKGLIVLPTEEAIRKYPDIMKQHFL 146
RL ++V V V+Y L E KG+I + A+ ++ D ++Q+
Sbjct: 74 KRLSSTDV-----GAFLVLDGPDVVYRTELPAELTAKGVIFTDLKTAVEQHADKVQQYLY 128
Query: 147 KLFKA---------------------GENKLTAYHTAVWNGGIFLYVKENLKVPFPLHLF 185
+ A E K +A A+W G F+YV ++V PL F
Sbjct: 129 SVVPAEVPDDTTIAAPGTTPSKSPDPSEGKFSALAAALWTNGAFVYVPRGVEVELPLGSF 188
Query: 186 FLIQESSLAQAPHIIIIAEKNSEVHLIEGCTAPILVRHSLHLDMTEAYIHDGAKVRLTVL 245
++ E+ A +++ E+N++V I+ + L + + E + A++R +
Sbjct: 189 RVMSEAGTYTATRTLVVCEENAQVTFIDEQDSEELPG-TYAIGAVELVVKQAARLRYVSI 247
Query: 246 QNWPEYVHTRPMTRAKVGKNAEFLNTTVSLGAGKSNIANPKYWVEEGGHVELNGVILGQK 305
QNW + V R V ++ + V++G S Y +G E+ +
Sbjct: 248 QNWGKGVTHIQRQRGDVERDGTLNSLVVTMGGTLSRTEMQSYLRGQGADSEMLALYFAND 307
Query: 306 DWYIDLGGEMYLQGKGASGLNSS---KAVIMDKSSVITRG--KIIAEAKKTKGHISCDAL 360
D + D LQ A+ +S K V D S + G K+ +A+KT + L
Sbjct: 308 DQHFD---HYTLQHHAAAHAHSDLLYKGVNDDTSVGVFSGMIKVDLDAQKTDAYQKHRTL 364
Query: 361 LLSDKARMETYPGLVSLVDEAELSHEAAIGKIREEELFYLMSRGLTEEKATQLIVKGFVE 420
+LS +AR + P L ++ SH + G + +E LF+L SRG++ E A +++V F+E
Sbjct: 365 MLSSEARNFSVPQLEINANDVRCSHGSTTGPVDQEALFFLRSRGISREVAEKMLVTAFLE 424
Query: 421 PMLKDIPIEFVVE 433
+L +P++ VV+
Sbjct: 425 DVLARVPLQSVVK 437
>pir||S43896 hypothetical protein 470 - Plasmodium falciparum
>gi|7448275|pir||S72279 conserved hypothetical protein
470 - Plasmodium falciparum plastid
>gi|1171584|emb|CAA64569.1| (X95275) red alga1
chloroplast [Plasmodium falciparum]
Length = 470
Score = 108 bits (267), Expect = 1e-22
Identities = 87/339 (25%), Positives = 147/339 (42%), Gaps = 27/339 (7%)
Query: 122 KKGLIVLPTEEAIRKYPDIMKQHFLKLFKAGENKLTAYHTAVWNGGIFLYVKENLKVPFP 181
K G+I LP + I KYP ++K++ + +N ++ +++ G F Y+ + +K F
Sbjct: 136 KLGIIFLPLFDIIFKYPLLIKKYLGTIISYKDNFFANINSIIFSEGSFCYIPKYVKCNFN 195
Query: 182 LHLFFLIQESSLAQAPHIIIIAEKNSEVHLIEGCTAPILVRHSLHLDMTEAYIHDGAKVR 241
L +F S AQ +II K S V +EGCTA + LH+ + E + D ++
Sbjct: 196 LSTYFKTNSSDFAQFERTLIIVGKYSYVSYLEGCTASLYKESQLHVAIVEIIVKDYGYIK 255
Query: 242 LTVLQNWPEYVHTRPMTRAKVGKNAEFLNTTVSLGAGKSNIANPKYWVEEGGHV--ELNG 299
LQNW R N N T G + VE G + +
Sbjct: 256 YYTLQNW---------YRGDYLGNGGLYNFTTKRGICLNYSKLDWIQVEVGSIITWKYPS 306
Query: 300 VILGQK----DWY----------IDLGGEMYLQGKGASGLNSSKAVIMDKSSVITRGKII 345
IL K ++Y D G +MY G SK++ ++ S I RG +
Sbjct: 307 TILKGKFSISNFYSISFISNMQIADTGSKMYHIGSYTKSYIISKSISLNNSLNIFRGLVY 366
Query: 346 AE--AKKTKGHISCDALLLSDKARMETYPGLVSLVDEAELSHEAAIGKIREEELFYLMSR 403
+ + K+ + C +L+ + + T P + + + + + EA + KI LF LM R
Sbjct: 367 IKPFSYKSYNYTECSSLIFGNNSLTVTIPYIKNYNNTSYVKQEAFVSKIEIIYLFLLMQR 426
Query: 404 GLTEEKATQLIVKGFVEPMLKDIPIEFVVEIKKIIELAV 442
GL+ ++ L++ GF + +P EF +EI + L +
Sbjct: 427 GLSISESISLLIIGFCSDIYNKLPFEFNLEIPILFSLKI 465
>pir||F72255 conserved hypothetical protein - Thermotoga maritima (strain MSB8)
>gi|4981981|gb|AAD36487.1|AE001794_3 (AE001794)
conserved hypothetical protein [Thermotoga maritima]
Length = 318
Score = 98.7 bits (242), Expect = 1e-19
Identities = 80/281 (28%), Positives = 132/281 (46%), Gaps = 31/281 (11%)
Query: 155 KLTAYHTAVWNG-GIFLYVKENLKVPFPLHLFFLIQESSLAQAPHIIIIAEKNSEVHLIE 213
+LT Y + NG + + +KE + V +P+H+ E Q I EKN++ +
Sbjct: 52 ELTPYR--IENGVQVDMRIKEGVVVEYPVHVCTGYLEKKGLQRVVFNIRLEKNAKAIFVA 109
Query: 214 GCTAPILVRHSLHLDMTEAYIHDGAKVRLTVLQNWPEY--VHTRPMTR---------AKV 262
C P TE + HD W EY HT T A+V
Sbjct: 110 HCVFP----------WTEDFTHDALMNVELEEGAWMEYHDEHTHSETGSINLITRSIARV 159
Query: 263 GKNAEFLNTTVSLGAGKSNIANPKYWV----EEGGHVELNGVILGQKDWYIDLGGEMYLQ 318
G+ A + NT + K+ I + ++ E+ EL + +D +++ + L
Sbjct: 160 GERAVYRNTFTLV---KTRIGTLRVFMDASLEKDAVGELYTKVKAVEDDDVEVKEILRLN 216
Query: 319 GKGASGLNSSKAVIMDKSSVITRGKIIAEAKKTKGHISCDALLLSDKARMETYPGLVSLV 378
G GA GL + AV +D++ V ++ A T+GH+ C + D + P LV
Sbjct: 217 GMGARGLAKTNAVAIDRAKVSVVNEVYGNAPHTRGHVECLEIAKGDGVDVRALPVLVVKN 276
Query: 379 DEAELSHEAAIGKIREEELFYLMSRGLTEEKATQLIVKGFV 419
D +EL+HEA+IG++ ++L LM++GLTEE+AT++I+KG +
Sbjct: 277 DSSELTHEASIGRVNAKQLETLMAKGLTEEEATEMIIKGIL 317
>sp|Q60349|Y034_METJA HYPOTHETICAL PROTEIN MJ0034 >gi|2127989|pir||B64304 hypothetical
protein homolog MJ0034 - Methanococcus jannaschii
>gi|1590837|gb|AAB98015.1| (U67462) conserved
hypothetical protein [Methanococcus jannaschii]
Length = 316
Score = 96.0 bits (235), Expect = 8e-19
Identities = 75/281 (26%), Positives = 130/281 (45%), Gaps = 61/281 (21%)
Query: 170 LYVKENLKVPFPLHLFFLIQESSLAQAPHIIIIAEKNSEVHLIEGCTAPILVRHSLHLDM 229
+ VK+ K +P+H+ F I E +++Q + II E++S + L+ C+ P
Sbjct: 63 IIVKKGYKFKYPIHMCFGITEENISQIIDVEIILEEDSSISLMSHCSFP--------KGK 114
Query: 230 TEAYIHDGAKVRLTVLQNWPEYVHTRPMTRAKVGKNAEF---------------LNTTVS 274
+I +G K+GKNA+F + TV
Sbjct: 115 GIKHIMNGI---------------------IKIGKNAKFSYNEFHYHGMDGDILVKPTVK 153
Query: 275 LGAGKSNIANPKYWVEEG--GHVELNGVILGQKDWYIDLGGEMY--------------LQ 318
+ + I + + +G G +++ I+ +KD ID+ Y L
Sbjct: 154 VEIDEGGIYISNFTLTKGRIGTLDIEQEIIAKKDAIIDITTRTYAIKEDVVKVNEVVKLN 213
Query: 319 GKGASGLNSSKAVIMDKSSVITRGKIIAEAKKTKGHISCDALLLSDKARMETYPGLVSLV 378
G+ A + S+ MD S + + KI A +KGHI C A ++ A +E+ P +V
Sbjct: 214 GENAKCIIKSRGAAMDNSKISLKLKIEGNAPYSKGHIDC-AEIVKGNAEVESIPIVVVRD 272
Query: 379 DEAELSHEAAIGKIREEELFYLMSRGLTEEKATQLIVKGFV 419
D+A ++HEAAIG + +++L LM++GL E++AT++IVKG +
Sbjct: 273 DKARITHEAAIGSVDKKQLETLMAKGLDEDEATEIIVKGMI 313
>gi|11496556 ycf24 homolog [Toxoplasma gondii]
>gi|5231259|gb|AAD41153.1|U87145_22 (U87145) ycf24
homolog [Toxoplasma gondii]
Length = 465
Score = 95.6 bits (234), Expect = 1e-18
Identities = 84/369 (22%), Positives = 158/369 (42%), Gaps = 20/369 (5%)
Query: 84 KALLDRLGISEVEQKYIAGLAVQT--DTGVIYNQFLQEWAKKGLIVLPTEEAIRKYPDIM 141
K++L +LG+ E K+ L + D+ ++ N K GL L ++I YP ++
Sbjct: 94 KSILSKLGL---ELKFSENLILDVIFDSVLLLNLTTFFLIKMGLFFLSFFQSIIFYPYLI 150
Query: 142 KQHFLKLFKAGENKLTAYHTAVWNGGIFLYVKENLKVPFPLHLFFLIQESSLAQAPHIII 201
+ + +N ++ ++N G F +V ++L L +F + AQ +I
Sbjct: 151 FSYLGSIVSNTDNFFLTINSIIFNEGSFCFVMKDLNSNINLTTYFRTHSENFAQFERTLI 210
Query: 202 IAEKNSEVHLIEGCTAPILVRHSLHLDMTEAYIHDGAKVRLTVLQNWPE---------YV 252
+ +NS++ EGC+AP+ + LH+ + E +I A ++ + +QNW Y
Sbjct: 211 VLSENSKLIYFEGCSAPMFLESQLHIAIVELFIKTKANLKYSTIQNWYRGNQLGEGGLYN 270
Query: 253 HTRPMTRAKVGKNAEFLN-TTVSLGAGKSNIANPKYWVEEGGHVELNGVILGQKDWYIDL 311
T T+ + FLN + +G+ + Y + + + D
Sbjct: 271 FT---TKRGFCMDKSFLNWIQIEIGSVITWKYPSTYLIGNKSFSNFFSLAMLSDYQVSDT 327
Query: 312 GGEMYLQGKGASGLNSSKAVIMDKSSVITRG--KIIAEAKKTKGHISCDALLLSDKARME 369
G +M GK SK++ + S RG I A + + C++LL+ A
Sbjct: 328 GTKMLHIGKNTKSFILSKSLSFNFSFYTYRGLVTIFKTALNSYNYTECNSLLIGCNAFTA 387
Query: 370 TYPGLVSLVDEAELSHEAAIGKIREEELFYLMSRGLTEEKATQLIVKGFVEPMLKDIPIE 429
T P + A ++ EA I K+ + LF+L+ RGL + +++ G+ + I E
Sbjct: 388 TIPYTIINNFSAYINQEATISKLELDFLFFLLHRGLNLKSTLMILIYGYCYNICSKISFE 447
Query: 430 FVVEIKKII 438
+E+ +I
Sbjct: 448 LELEVPLLI 456
>emb|CAA73004.1| (Y12333) hypothetical protein [Eimeria tenella]
Length = 387
Score = 89.7 bits (219), Expect = 6e-17
Identities = 72/319 (22%), Positives = 139/319 (43%), Gaps = 26/319 (8%)
Query: 69 IPDKIESLDDLPPEMKALLDRLGISEVEQKYIAGLAVQT--DTGVIYNQFLQEWAKKGLI 126
IP K S + ++LD++G++ E K I+ LA+ D+ I + K G+I
Sbjct: 90 IPSKFNSKKSINNMFNSILDKIGLNSQENKLISTLAIDIVLDSVSIVDTITNFLIKTGII 149
Query: 127 VLPTEEAIRKYPDIMKQHFLKLFKAGENKLTAYHTAVWNGGIFLYVKENLKVPFPLHLFF 186
+P EAI + ++ + + +N + ++ +++GG F ++ +N+K L +F
Sbjct: 150 FIPFFEAINYFSYLVFSYIGTIVPLEDNFFSTLNSTIFSGGSFCFIAKNIKCNINLSTYF 209
Query: 187 LIQESSLAQAPHIIIIAEKNSEVHLIEGCTAPILVRHSLHLDMTEAYIHDGAKVRLTVLQ 246
Q AQ ++I + +S + EGC+API + LH+ + E + + + + +Q
Sbjct: 210 RTQSEDFAQFERTLLIVDNSSYIIYTEGCSAPIFLESQLHVALVEILVKEKGILNYSTIQ 269
Query: 247 NWPEYVHTRPMTRAKVGKNAEFLNTTVSLGAGKSNIANPKYWVEEGGHVELNGVILGQKD 306
NW + G+ + TT K + + WV+ +E+ I +
Sbjct: 270 NW--------YRGDQSGEGGLYNFTTKRGWCLKKALLD---WVQ----IEMGSAITWKYP 314
Query: 307 WYIDLGGEMYLQGKGASGLNSSKAVIMDKSSVITRGKIIAEAKKTKGHISCDALLLSDKA 366
YL G +S S ++I D T K++ TK H+ ++ L+
Sbjct: 315 -------STYLIGNYSSSNFFSLSLISDMQISDTGNKMLHIGSYTKSHVYSKSISLNKS- 366
Query: 367 RMETYPGLVSLVDEAELSH 385
+ Y GLV + A+ ++
Sbjct: 367 -IYAYRGLVKIFKNAKYTY 384
>gb|AAG19053.1| (AE005004) Vng0527c [Halobacterium sp. NRC-1]
Length = 404
Score = 87.4 bits (213), Expect = 3e-16
Identities = 90/430 (20%), Positives = 184/430 (41%), Gaps = 47/430 (10%)
Query: 18 IEELAKRNKEPEWMTKIRYRALEEFMRAPLGDPIISEEKLLNFIAKPEIEGIPD-KIESL 76
+ +A EP W+ + R ALE L+ +A P + P K +L
Sbjct: 14 VRRIADERDEPAWLRETRLDALEA----------------LDDLAFPSVIETPGRKWTTL 57
Query: 77 DDLPPEMKALLDRLGISEVEQKYIAGLAVQTDTGVIYNQFLQEWAKKGLIVLPTEEAIRK 136
+DL + AL+D L S+ E K G + ++ LQ+
Sbjct: 58 EDL--DFDALVDPL--SQTEDKDQVG--AENARVESFHDALQD---------------DD 96
Query: 137 YPDIMKQHFLKLFKAGENKLTAYHTAVWNGGIFLYVKENLKVPFPLHLFFLIQESSLAQA 196
D ++ F + +N+LTA TA++ G +YV + + +S +
Sbjct: 97 LADRVEDAFGSVIDPHQNRLTALSTALFTTGTVVYVPAGVDAE---DVTIRTSMNSRSLF 153
Query: 197 PHIIIIAEKNSEVHLIEGC-TAPILVRHSLHLDMTEAYIHDGAKVRLTVLQNWPEYVHTR 255
+ ++I E N+ ++E T + + + E + + V+ LQ++ E +
Sbjct: 154 NYTLVITEDNATATILERQDTGDDVDGERYYSGIVEVDAGENSYVQYGSLQDFDEQTYNY 213
Query: 256 PMTRAKVGKNAEFLNTTVSLGAGKSNIANPKYWVEEGGHVELNGVILGQKDWYIDLGGEM 315
+ R A ++G+ + + ++ G G D + DL ++
Sbjct: 214 TLKRGHADTYATVNWIEGNIGSRLTKTGVSTELAGDASETKIVGAFFGHDDQHFDLDAKV 273
Query: 316 YLQGKGASGLNSSKAVIMDKSSVITRG--KIIAEAKKTKGHISCDALLLSDKARMETYPG 373
+ + + + ++ VI D + + G + ++A T + + L+LSD++ + P
Sbjct: 274 WHRAEHTTADLVTRGVIDDDARSVYEGVQDVGSDAWDTSSYQRENTLMLSDESEADASPK 333
Query: 374 LVSLVDEAELSHEAAIGKIREEELFYLMSRGLTEEKATQLIVKGFVEPMLKDIPIEFVVE 433
L+ + E SH A +G++ +E LFY+ RGLT ++AT ++V GF P+L+++ ++ E
Sbjct: 334 LIINNHDTEASHSATVGQVDQETLFYMQDRGLTAQQATDMLVAGFFVPVLEEVEVQ---E 390
Query: 434 IKKIIELAVS 443
+++ +E ++
Sbjct: 391 LREDLETRIA 400
>sp|P35912|YC24_CYACA HYPOTHETICAL PROTEIN IN ATPA 3'REGION (ORF X)
>gi|629439|pir||S39522 hypothetical protein X - red alga
(Cyanidium caldarium) chloroplast (fragment)
>gi|429180|emb|CAA48016.1| (X67814) orfX [Galdieria
sulphuraria]
Length = 221
Score = 87.0 bits (212), Expect = 4e-16
Identities = 46/139 (33%), Positives = 76/139 (54%), Gaps = 2/139 (1%)
Query: 310 DLGGEMYLQGKGASGLNSSKAVIMDKSSVITRGKIIAE--AKKTKGHISCDALLLSDKAR 367
D G +M GK + SK + S RGK+ A + + + CD+LL+ + +
Sbjct: 82 DTGSKMIHIGKNSRSKIISKGISTGNSINSYRGKVKVSLNASRARNYSQCDSLLIGNSSE 141
Query: 368 METYPGLVSLVDEAELSHEAAIGKIREEELFYLMSRGLTEEKATQLIVKGFVEPMLKDIP 427
T+P + + + HEA+I KI EE+LFY M RG++ E+A LIV GF + + ++P
Sbjct: 142 ANTFPYIEVYNRSSIIEHEASISKINEEKLFYFMQRGISIEEAISLIVSGFCKEVFTELP 201
Query: 428 IEFVVEIKKIIELAVSGGL 446
+EF +E K++ L + G +
Sbjct: 202 LEFALEADKLLGLKLEGSV 220
>pir||E82676 ABC transporter membrane protein XF1474 [imported] - Xylella
fastidiosa (strain 9a5c)
>gi|9106498|gb|AAF84283.1|AE003977_6 (AE003977) ABC
transporter membrane protein [Xylella fastidiosa]
Length = 422
Score = 85.4 bits (208), Expect = 1e-15
Identities = 74/286 (25%), Positives = 125/286 (42%), Gaps = 20/286 (6%)
Query: 149 FKAGENKLTAYHTAVWNGGIFLYVKENLKVPFPLHLFFLIQESSLAQAPHIIIIAEKNSE 208
FK + +TA+ + G+ L V +N+ V P+HL F+ + A H+ E
Sbjct: 120 FKHRDETFARLNTALADEGVLLRVHQNITVNTPIHLIFITPAGEIDHAWHL----RNQIE 175
Query: 209 VHLIEGCTAPI-LVRHSLHLD--------MTEAYIHDGAKVRLTVLQNWPEYVHTRPMTR 259
+H C A + L+ H LH +T ++ GA + LQN + T
Sbjct: 176 LH----CGASLQLIEHQLHTGHAAHLNNVLTRIHLAPGACLEHARLQNDATATTSFLRTD 231
Query: 260 AKVGKNAEFLNTTVSLGAGKSNIANPKYWVEEGGHVELNGVILGQKDWYIDLGGEMYLQG 319
A + ++AE+ V LGA S + + NG++LG ++D +
Sbjct: 232 AVLAQDAEYRRVDVELGAKLSRHELNVRLEGDNARLTANGILLGHLTRHLDTRLHIEHIA 291
Query: 320 KGASGLNSSKAVIMDKSSVITRGKIIAE--AKKTKGHISCDALLLSDKARMETYPGLVSL 377
+ + + + D+S V+ G I A + +S LLLS A ++T P L+
Sbjct: 292 RNTASELLWRGIGTDRSRVVFHGGIHIHQGADGSDARLSNKNLLLSANAEIDTQPVLIIN 351
Query: 378 VDEAELSHEAAIGKIREEELFYLMSRGLTEEKATQLIVKGFV-EPM 422
+E + +H A +G++ LFYL +RG+ A QL+ F EP+
Sbjct: 352 ANEVQAAHGATVGQLDPHALFYLRTRGIPHTTAQQLLSAAFCHEPL 397
>sp|O58613|Y883_PYRHO HYPOTHETICAL PROTEIN PH0883 >gi|7518872|pir||C71077 hypothetical
protein PH0883 - Pyrococcus horikoshii
>gi|3257294|dbj|BAA29977.1| (AP000004) 326aa long
hypothetical protein [Pyrococcus horikoshii]
Length = 326
Score = 85.0 bits (207), Expect = 2e-15
Identities = 72/254 (28%), Positives = 117/254 (45%), Gaps = 13/254 (5%)
Query: 172 VKENLKVPFPLHLFFLIQESSLAQAPHIIIIAEKNSEVHLIEGCTAPILVRHSLHLDMTE 231
+ +N+K+PFP+HL S Q I KNS V C P S H +T
Sbjct: 77 IADNVKLPFPIHLCTGYLRSEGYQKVIFNIKIGKNSIVKFTSHCIFPYAKDFS-HEALTS 135
Query: 232 AYIHDGAKVRLTVLQNWPEYVHTRPMTRAKVGKNAEFLNTTVSLGAGKSN------IANP 285
+ + + V E V T ++ KNA + SL ++ IAN
Sbjct: 136 IKVGENSWVSYEDEHIHGEGVRMISKTEIELNKNARYTGK-FSLTKHRAKELKLEMIAN- 193
Query: 286 KYWVEEGGHVELNGVILGQKDWYIDLGGEMYLQGKGASGLNSSKAVIMDKSSVITRGKII 345
+ E +EL + KD +++ YL+G + S + D++ +
Sbjct: 194 ---LGERSVLELESKVKAVKDDSVEVREVAYLKGAYSRANLKSTVIAFDEARANVVNEAY 250
Query: 346 AEAKKTKGHISCDALLLSDKARMETYPGLVSLVDEAELSHEAAIGKIREEELFYLMSRGL 405
KGH+ C ++ + A ++T P L D+AEL+HEA+IG+I E +L LM++GL
Sbjct: 251 GFGDYAKGHVECHEIVKGN-ADVQTVPLLRVKNDKAELTHEASIGRINEAQLMQLMAKGL 309
Query: 406 TEEKATQLIVKGFV 419
T+E+AT+LI++G +
Sbjct: 310 TDEEATELIIRGLL 323
>sp|Q55792|Y076_SYNY3 HYPOTHETICAL 50.0 KD PROTEIN SLR0076 >gi|7469654|pir||S76600
hypothetical protein - Synechocystis sp. (strain PCC
6803) >gi|1001707|dbj|BAA10544.1| (D64004) hypothetical
protein [Synechocystis sp.]
Length = 453
Score = 77.6 bits (188), Expect = 3e-13
Identities = 67/290 (23%), Positives = 125/290 (43%), Gaps = 15/290 (5%)
Query: 152 GENKLTAYHTAVWNGGIFLYVKENLKVPFPLHLFFL--IQESSLAQAPHIIIIAEKNSEV 209
G + +TA +++ N ++ P+HL FL + + + P ++++ E N++V
Sbjct: 150 GNEVFSNLNTAGMTDSAVVWIPANTELKSPIHLLFLTVVDPTPIMVQPRLLVVVENNAQV 209
Query: 210 HLIEG-------CTAPILVRHSLHLDMTEAYIHDGAKVRLTVLQNWPEYVHTRPMTRAKV 262
+ E CT + + ++E Y+ + A+V T ++N + + + +
Sbjct: 210 TIAESYGAISTNCTDRPQQQPYFNNIVSEIYLGENAQV--THIRNQRDSGDSFHIATTAI 267
Query: 263 --GKNAEFLNTTVSLGAGKSNIANPKYWVEEGGHVELNGVILGQKDWYIDLGGEMYLQGK 320
GK + + V+LGA S EE E + + D + L
Sbjct: 268 AQGKQSRYRLIDVNLGAKLSRHNLQMTQQEEATKTEFLALTILAGRQVSDTHSTIALNHP 327
Query: 321 GASGLNSSKAVIMDKSSVITRGKIIAE--AKKTKGHISCDALLLSDKARMETYPGLVSLV 378
+ K ++ + + + GK++ A+ T L+LS KAR+ T P L
Sbjct: 328 HGATNQLHKCIVDEYAQAVFSGKVLVPQAAQLTNAQQLNRNLVLSSKARINTKPELQITA 387
Query: 379 DEAELSHEAAIGKIREEELFYLMSRGLTEEKATQLIVKGFVEPMLKDIPI 428
D + SH A I ++ +E+FYL SRGL + A L++ F +L IP+
Sbjct: 388 DNVKCSHGATISQLEADEVFYLRSRGLNDYDARHLLIDAFAGEILDQIPL 437
>emb|CAC11350.1| (AL445063) conserved hypothetical protein [Thermoplasma
acidophilum]
Length = 394
Score = 74.5 bits (180), Expect = 2e-12
Identities = 74/318 (23%), Positives = 132/318 (41%), Gaps = 14/318 (4%)
Query: 112 IYNQFLQEWAKKGLIVLPTEEAIRKYPDIMKQHFLKLFKAGENKLTAYH---TAVWNGGI 168
I N + + KGLIV +A +P I+ F E Y A ++ G+
Sbjct: 70 IVNGRVHVYDTKGLIVSSIRDAEETHPSILYD-----FAGKEYVYDRYEFLINAGFHDGL 124
Query: 169 FLYVKENLKVPFPLHLFFLIQESSLAQAPHIIIIAEKNSEVHLIEGCTAPILVRHSLHLD 228
FLYV + + + + S+ + A +II ++ S++++ + + D
Sbjct: 125 FLYVPKGVSASINIEDY---ASSTSSFAAKNMIIVDEGSKINVFRRISGSG-TGNGYQGD 180
Query: 229 MTEAYIHDGAKVRLTVLQNWPEYVHTRPMTRAKVGKNAEFLNTTVSLGAGKSNIANPKYW 288
T ++ A + +Q+ P+ V R + + G +S I Y
Sbjct: 181 NTYIFLGKNASIEYNQVQDRPKTVEGLQFIRTFMDDYSSARIYHAENGYDRSIIVTESYQ 240
Query: 289 VEEGGHVELNGVILGQKDWYIDLGGEMYLQGKGASGLNSSKAVIMDKSSVITRGKIIA-- 346
G + ++ GV + +DL G + ++ D+S + RG I
Sbjct: 241 YGNGTNYQVRGVSFTRSLQQMDLRDNTIQIGTHTVADIYIRGIVRDRSLTMQRGNIDIRE 300
Query: 347 EAKKTKGHISCDALLLSDKARMETYPGLVSLVDEAELSHEAAIGKIREEELFYLMSRGLT 406
+A+ +G+ LLLS A T P L+ ++ H +AI I + LFYL SRG+
Sbjct: 301 QARHAEGYYDTRILLLSKDAFANTKPALLINNNDVRSKHASAISNIDDISLFYLRSRGID 360
Query: 407 EEKATQLIVKGFVEPMLK 424
E+ A +IV+GF E +++
Sbjct: 361 EDTAKNMIVEGFTEHVVE 378
>pir||H72047 conserved hypothetical protein CP0056 [imported] - Chlamydophila
pneumoniae (strains CWL029 and AR39)
>gi|4376992|gb|AAD18829.1| (AE001651) ABC Transporter
Membrane Protein [Chlamydophila pneumoniae CWL029]
>gi|7188993|gb|AAF37946.1| (AE002169) conserved
hypothetical protein [Chlamydophila pneumoniae AR39]
>gi|8979062|dbj|BAA98897.1| (AP002547) ABC transporter
membrane protein [Chlamydophila pneumoniae J138]
Length = 415
Score = 74.1 bits (179), Expect = 3e-12
Identities = 70/276 (25%), Positives = 127/276 (45%), Gaps = 36/276 (13%)
Query: 167 GIFLYVKENLKVPFPL---HLFF-LIQESSLAQAPHIIIIAEKNSEVHLIEGCTAPILVR 222
G+ +Y+ E ++ P+ H+ F + + + +P I++I L + +A I +
Sbjct: 135 GVVIYIPEEMQTSDPIFVRHISFPTVSDHDVIFSPRIVVI--------LGQRASAQIQIS 186
Query: 223 HSLHLDM-----------TEAYIHDGAKVRLTVLQNWPEYVHTRPMTRAKVGKNAEFLNT 271
H + L+M TE ++ +GA + + ++ + E T A V K+A T
Sbjct: 187 HDVDLEMVGSSKTIVNGVTELFVGEGADLTVFMVPGYSEEDTLSWSTIATVEKDAICRMT 246
Query: 272 TVSLGA--GKSNIANPKYWVEEGGHVELNGVILG-QKDWYIDL----GGEMYLQGKGASG 324
L + G N Y V + GH E ++ +K W +L E + S
Sbjct: 247 QNLLESCQGFGWFDNTSYIVGKKGHAESLVLVQSPRKTWVNNLMSHDAEETVSRQNIKSI 306
Query: 325 LNSSKAVIMDKSSVITRGKIIAEAKKTKGHISCDALLLSDKARMETYPGLVSLVDEAELS 384
L S + S+ ++G + +K D LLLS +AR+ T+P L DE + S
Sbjct: 307 LYSGHFLFEGTISISSQGDLSDANQKH------DTLLLSSEARVSTFPRLEIETDEVKAS 360
Query: 385 HEAAIGKIREEELFYLMSRGLTEEKATQLIVKGFVE 420
H A +G + +++FY+ SRG+TE +A + ++ GF++
Sbjct: 361 HGATVGPLDPQQIFYMRSRGMTEAEAQEKLIHGFLK 396
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.317 0.137 0.389
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 161256081
Number of Sequences: 2977
Number of extensions: 6857117
Number of successful extensions: 17064
Number of sequences better than 1.0e-10: 49
Number of HSP's better than 0.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 16927
Number of HSP's gapped (non-prelim): 62
length of query: 446
length of database: 189,106,746
effective HSP length: 58
effective length of query: 388
effective length of database: 154,394,500
effective search space: 59905066000
effective search space used: 59905066000
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.6 bits)
S2: 166 (69.1 bits)