BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB1857 (PAB1857) DE:Hypothetical protein
(602 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||C75120 hypothetical protein PAB1857 - Pyrococcus abyssi (st... 1256 0.0
pir||D71011 hypothetical protein PH1386 - Pyrococcus horikoshii ... 956 0.0
pir||S76831 hypothetical protein - Synechocystis sp. (strain PCC... 318 1e-85
dbj|BAB05134.1| (AP001512) unknown conserved protein in others [... 289 8e-77
pir||B70859 hypothetical protein Rv3031 - Mycobacterium tubercul... 201 1e-50
pir||D71334 conserved hypothetical protein TP0358 - syphilis spi... 143 7e-33
pir||T45394 hypothetical protein MLCB637.01c [imported] - Mycoba... 134 4e-30
pir||T43949 hypothetical protein [imported] - Thermus thermophil... 126 6e-28
>pir||C75120 hypothetical protein PAB1857 - Pyrococcus abyssi (strain Orsay)
>gi|5458187|emb|CAB49676.1| (AJ248285) hypothetical
protein [Pyrococcus abyssi]
Length = 602
Score = 1256 bits (3214), Expect = 0.0
Identities = 602/602 (100%), Positives = 602/602 (100%)
Query: 1 MKGYLTFVLHTHIPYVRKHGKWPFGEEWLFEAISESYVPLLIELEKLKEKGVKFELVISF 60
MKGYLTFVLHTHIPYVRKHGKWPFGEEWLFEAISESYVPLLIELEKLKEKGVKFELVISF
Sbjct: 1 MKGYLTFVLHTHIPYVRKHGKWPFGEEWLFEAISESYVPLLIELEKLKEKGVKFELVISF 60
Query: 61 TPVLLEQLNDEYIKAEFNRYMERKIKLMKEDLKKADGKLRNAIEFMIKYFEDVYEYWSKI 120
TPVLLEQLNDEYIKAEFNRYMERKIKLMKEDLKKADGKLRNAIEFMIKYFEDVYEYWSKI
Sbjct: 61 TPVLLEQLNDEYIKAEFNRYMERKIKLMKEDLKKADGKLRNAIEFMIKYFEDVYEYWSKI 120
Query: 121 NGDIIGRFKQLQDEGFVEIITSAATHGYLPLLGRDEAIDAQILTGIRVYEKYFGKKPRGI 180
NGDIIGRFKQLQDEGFVEIITSAATHGYLPLLGRDEAIDAQILTGIRVYEKYFGKKPRGI
Sbjct: 121 NGDIIGRFKQLQDEGFVEIITSAATHGYLPLLGRDEAIDAQILTGIRVYEKYFGKKPRGI 180
Query: 181 WLPECAYRPDGLWKSPSTGEIKWRKGIEHFLKKYGLEFFFVESHLIDEGPATSKYGVTLP 240
WLPECAYRPDGLWKSPSTGEIKWRKGIEHFLKKYGLEFFFVESHLIDEGPATSKYGVTLP
Sbjct: 181 WLPECAYRPDGLWKSPSTGEIKWRKGIEHFLKKYGLEFFFVESHLIDEGPATSKYGVTLP 240
Query: 241 AKTKKSTLRPYFLKNGVVVFARNRETGIQVWSADIGYPGDPWYREFHKKAEKSGGQYWRV 300
AKTKKSTLRPYFLKNGVVVFARNRETGIQVWSADIGYPGDPWYREFHKKAEKSGGQYWRV
Sbjct: 241 AKTKKSTLRPYFLKNGVVVFARNRETGIQVWSADIGYPGDPWYREFHKKAEKSGGQYWRV 300
Query: 301 TGTKDLGAKEPYEPEKAMERVEEHANHFLNLVSSLLEEFKEKEGELGIVVAPYDTELFGH 360
TGTKDLGAKEPYEPEKAMERVEEHANHFLNLVSSLLEEFKEKEGELGIVVAPYDTELFGH
Sbjct: 301 TGTKDLGAKEPYEPEKAMERVEEHANHFLNLVSSLLEEFKEKEGELGIVVAPYDTELFGH 360
Query: 361 WWFEGVKWLARVLELAQDKGIKTIGISNFLKEFRGKKFEIELPEGSWGMFGTHYTWWNPD 420
WWFEGVKWLARVLELAQDKGIKTIGISNFLKEFRGKKFEIELPEGSWGMFGTHYTWWNPD
Sbjct: 361 WWFEGVKWLARVLELAQDKGIKTIGISNFLKEFRGKKFEIELPEGSWGMFGTHYTWWNPD 420
Query: 421 VEWTWPIIHKAEDRMIALATKYSGKDSLADRVLRQLSRELLLLEASDWQFLMTTGQAREY 480
VEWTWPIIHKAEDRMIALATKYSGKDSLADRVLRQLSRELLLLEASDWQFLMTTGQAREY
Sbjct: 421 VEWTWPIIHKAEDRMIALATKYSGKDSLADRVLRQLSRELLLLEASDWQFLMTTGQAREY 480
Query: 481 GAKRILEHAHNFHTLANLLEEYFEQGTFDVELLEELEEKDNLFQEVPVEAYISKEPPEVP 540
GAKRILEHAHNFHTLANLLEEYFEQGTFDVELLEELEEKDNLFQEVPVEAYISKEPPEVP
Sbjct: 481 GAKRILEHAHNFHTLANLLEEYFEQGTFDVELLEELEEKDNLFQEVPVEAYISKEPPEVP 540
Query: 541 RYIEPPEVPDNNEEEEKGEWSSGKSEEKEDFEEFLLSIKGVGPKTVERLKRAGITSLREL 600
RYIEPPEVPDNNEEEEKGEWSSGKSEEKEDFEEFLLSIKGVGPKTVERLKRAGITSLREL
Sbjct: 541 RYIEPPEVPDNNEEEEKGEWSSGKSEEKEDFEEFLLSIKGVGPKTVERLKRAGITSLREL 600
Query: 601 SK 602
SK
Sbjct: 601 SK 602
>pir||D71011 hypothetical protein PH1386 - Pyrococcus horikoshii
>gi|3257809|dbj|BAA30492.1| (AP000006) 560aa long
hypothetical protein [Pyrococcus horikoshii]
Length = 560
Score = 956 bits (2445), Expect = 0.0
Identities = 438/559 (78%), Positives = 501/559 (89%), Gaps = 4/559 (0%)
Query: 1 MKGYLTFVLHTHIPYVRKHGKWPFGEEWLFEAISESYVPLLIELEKLKEKGVKFELVISF 60
MKGYLTFVLHTHIPYVRKHGKWPFGEEWLFEA++ESY+PLL+ELEKLKE+GV+FELVISF
Sbjct: 1 MKGYLTFVLHTHIPYVRKHGKWPFGEEWLFEAMAESYIPLLMELEKLKERGVRFELVISF 60
Query: 61 TPVLLEQLNDEYIKAEFNRYMERKIKLMKEDLKK-ADGKLRNAIEFMIKYFEDVYEYWSK 119
TPVL+EQL DEYIK EF +YMERK+K M+EDL++ D KLR AI FMI YF+DVY YW
Sbjct: 61 TPVLMEQLADEYIKREFEKYMERKLKSMEEDLERFKDEKLREAINFMIGYFKDVYSYWKS 120
Query: 120 INGDIIGRFKQLQDEGFVEIITSAATHGYLPLLGRDEAIDAQILTGIRVYEKYFGKKPRG 179
I+G+I+G+F++LQDEG+VE+ITSAATHGYLPLLGRDEAI+AQ+L GI+VYEKYFG+KPRG
Sbjct: 121 IDGNILGKFRELQDEGYVEVITSAATHGYLPLLGRDEAIEAQLLNGIKVYEKYFGRKPRG 180
Query: 180 IWLPECAYRPDGLWKSPSTGEIKWRKGIEHFLKKYGLEFFFVESHLIDEGPATSKYGVTL 239
IWLPECAYRPDGLWKSPSTGE+KWRKGIEHFLKK+G+E+FFVESHLID+GP + +YG L
Sbjct: 181 IWLPECAYRPDGLWKSPSTGEVKWRKGIEHFLKKFGIEYFFVESHLIDKGPVSLRYGNIL 240
Query: 240 PAKTKKSTLRPYFLKNGVVVFARNRETGIQVWSADIGYPGDPWYREFHKKAEKSGGQYWR 299
PAKTK+STLRPYFLKNG+ VFARNRETGIQVWSA +GYPGDPWYREFHK+AEKSGGQYWR
Sbjct: 241 PAKTKRSTLRPYFLKNGIAVFARNRETGIQVWSAKVGYPGDPWYREFHKRAEKSGGQYWR 300
Query: 300 VTGTKDLGAKEPYEPEKAMERVEEHANHFLNLVSSLLEEFKEKEGELGIVVAPYDTELFG 359
VTGTKDLGAKEPYEPEKAMERV EHA HF+ LV S+LE F+ EGE GIVVAPYDTELFG
Sbjct: 301 VTGTKDLGAKEPYEPEKAMERVNEHAKHFIGLVLSILESFESTEGEKGIVVAPYDTELFG 360
Query: 360 HWWFEGVKWLARVLELAQDKGIKTIGISNFLKEFRGKKFEIELPEGSWGMFGTHYTWWNP 419
HWWFEG KWL+RVLELA+ GIKT+ ISNFL EF+G ++ +ELPEGSWGMFGTH+TWWNP
Sbjct: 361 HWWFEGAKWLSRVLELAERSGIKTVTISNFLDEFKGTRYGVELPEGSWGMFGTHHTWWNP 420
Query: 420 DVEWTWPIIHKAEDRMIALATKYSGKDSLADRVLRQLSRELLLLEASDWQFLMTTGQARE 479
+VEWTWPIIHKAEDRM++LATKY GKD DRVL QL+RELLLLEASDWQFLMTTGQA+E
Sbjct: 421 EVEWTWPIIHKAEDRMVSLATKYYGKDKFGDRVLAQLARELLLLEASDWQFLMTTGQAKE 480
Query: 480 YGAKRILEHAHNFHTLANLLEEYFEQGTFD-VELLEELEEKDNLFQEVPVEAYISKEPPE 538
YG RILEHAH FH LAN LE YFE+GTFD VELL E+EE+DN+F + + YIS+EPPE
Sbjct: 481 YGKMRILEHAHYFHRLANALERYFERGTFDEVELLNEVEERDNIFHPIILTPYISQEPPE 540
Query: 539 VPRYIEPPEVPDNNEEEEK 557
VP YI+PP P N +E++K
Sbjct: 541 VPNYIDPP--PLNKKEKKK 557
>pir||S76831 hypothetical protein - Synechocystis sp. (strain PCC 6803)
>gi|1653832|dbj|BAA18743.1| (D90916) hypothetical
protein [Synechocystis sp.]
Length = 529
Score = 318 bits (806), Expect = 1e-85
Identities = 191/559 (34%), Positives = 283/559 (50%), Gaps = 66/559 (11%)
Query: 3 GYLTFVLHTHIPYVRK-HGKWPFGEEWLFEAISESYVPLLIELEKLKEKGVKFELVISFT 61
GY+ VLH H+P+VR + EEWL+EAI+E+Y+PL+ E LK GV F++ +S T
Sbjct: 4 GYVALVLHAHLPFVRHPESDYVLEEEWLYEAITETYIPLIHVFEGLKRDGVDFKITMSMT 63
Query: 62 PVLLEQLNDEYIKAEFNRYMERKIKLMKEDLKKAD--GKLRNAIEFMIKYFEDVYEYWSK 119
P L+ L D ++ + ++ +L+ +++ + + G L+ +F K F + E W +
Sbjct: 64 PPLVSMLRDPLLQQRYEAHLSLLQELLAKEIVRNEHNGHLQYLADFYAKEFAAIRETWER 123
Query: 120 INGDIIGRFKQLQDEGFVEIITSAATHGYLPLLGR-DEAIDAQILTGIRVYEKYFGKKPR 178
+GD++ FKQ QD +EIIT ATHGY PL+ +A+ AQI YE+ FG+ P+
Sbjct: 124 YDGDLVTAFKQFQDSNNLEIITCGATHGYFPLMKMYPQAVWAQIKVACEHYEENFGRSPK 183
Query: 179 GIWLPECAYRPDGLWKSPSTGEIKWRKGIEHFLKKYGLEFFFVESHLIDEGPATSKYGVT 238
GIWLPECAY +G+E L GL +F V+ H I K+G
Sbjct: 184 GIWLPECAYY----------------EGVERMLADAGLRYFLVDGHGILYARPRPKFG-- 225
Query: 239 LPAKTKKSTLRPYFLKNGVVVFARNRETGIQVWSADIGYPGDPWYREFHK---------- 288
T P F + GV F R+ E+ QVWS+ +GYPGDP YREF+K
Sbjct: 226 --------TYAPIFTETGVAAFGRDHESSQQVWSSQVGYPGDPVYREFYKDLGWEAEYEY 277
Query: 289 ---------KAEKSGGQYWRVTGTKDLGAKEP--YEPEKAMERVEEHANHFLNLVSSLLE 337
+ + G +Y ++T ++D G E Y+P A E+ EHA++F+ +
Sbjct: 278 IKPYIMPNGQRKNIGIKYHKIT-SRDGGLSEKAWYDPYWAKEKAAEHASNFMYNRQQQVG 336
Query: 338 EFKEKEGELGIVVAPYDTELFGHWWFEG---VKWLARVLELAQDKGIKTIGISNFLKEFR 394
G +VV+PYD ELFGHWW+EG + +L R QD T +++ R
Sbjct: 337 HLSGIMGRPPLVVSPYDAELFGHWWYEGPWFIDYLFRKSWFDQD----TFEMTHLADYLR 392
Query: 395 GKKFE--IELPEGSWGMFGTHYTWWNPDVEWTWPIIHKAEDRMIALATKYSGKDSLADRV 452
G + + SWG G H W N W +P +HKA +RMI L+ + D L ++
Sbjct: 393 GNPHQQVCRPSQSSWGYKGFHEYWLNDTNAWIYPHLHKAAERMIELSHR-EAVDELEEKA 451
Query: 453 LRQLSRELLLLEASDWQFLMTTGQAREYGAKRILEHAHNFHTLANLLEEYFEQGTFDVEL 512
L Q +RELLL ++SDW F+M TG Y +R H F + L + D
Sbjct: 452 LNQAARELLLAQSSDWAFIMRTGTMVPYAVRRTRSHLLRF----DKLFDDIRANKVDAGW 507
Query: 513 LEELEEKDNLFQEVPVEAY 531
LE++E DN+F ++ Y
Sbjct: 508 LEKVEVMDNIFPKIDYRVY 526
>dbj|BAB05134.1| (AP001512) unknown conserved protein in others [Bacillus
halodurans]
Length = 923
Score = 289 bits (731), Expect = 8e-77
Identities = 162/520 (31%), Positives = 268/520 (51%), Gaps = 52/520 (10%)
Query: 2 KGYLTFVLHTHIPYVRKHGKWPFGEEWLFEAISESYVPLLIELEKLKEKGVKFELVISFT 61
+GY + VLH H+PYVR + E WLFEA+SE+Y+PLL LEKL VK + ISFT
Sbjct: 3 EGYFSLVLHAHLPYVRHQEEDRLEERWLFEAMSETYIPLLWALEKLP---VKHAVTISFT 59
Query: 62 PVLLEQLNDEYIKAEFNRYMERKIKLMKEDLKKA-DGKLRNAIEFMIKYFEDVYEYWSKI 120
P ++E L+D ++ + ++E +L+K++ K+ D + +N ++F + +E + + +
Sbjct: 60 PPVMEMLSDPLVQTRYLNHLENTEQLLKKEEKRTNDQRTQNLVQFYKQRYEKLKATFLQW 119
Query: 121 NGDIIGRFKQLQDEGFVEIITSAATHGYLPLLGRDEAIDAQILTGIRVYEKYFGKKPRGI 180
+ +++ F+ L + ++TSAATH + P L EAI AQ+ GI +E++FGKKP G
Sbjct: 120 DRNLLIGFRSLMENEQCTLMTSAATHAFFPYLKTKEAIRAQVRHGIACFEQHFGKKPLGF 179
Query: 181 WLPECAYRPDGLWKSPSTGEIKWRKGIEHFLKKYGLEFFFVESHLIDEGPATSKYGVTLP 240
WLPECA+ P G++ L + G+ + FV+ H + +T
Sbjct: 180 WLPECAFSP----------------GVDRILFEEGIRYTFVDEHAV----------LTAD 213
Query: 241 AKTKKSTLRPYFLKNGVVVFARNRETGIQVWSADIGYPGDPWYREFHKKAE--------- 291
K + P + +G+ +F R+ E +VWS+ +GYPGD YREF++
Sbjct: 214 PTPHKGSSAPIYSPHGIALFPRHTELSAKVWSSTLGYPGDVDYREFYRDIAYDREWDYIK 273
Query: 292 ----------KSGGQYWRVTGTKDLGAKEPYEPEKAMERVEEHANHFLNLVSSLLEEFKE 341
+G +Y R+TG + K+ Y E A +RV+EHANHF+ + +++
Sbjct: 274 PHVHKDGIRIDTGLKYHRITGHTE--EKDLYVREWAEKRVQEHANHFIGAIHHEIDQHGG 331
Query: 342 KEGELGIVVAPYDTELFGHWWFEGVKWLARVLELAQDKGIKTIGISNFLKEFRGKKFEIE 401
+ ++V P+D ELFGHWWFEG +W+ + E D+ + I +L+
Sbjct: 332 QNFPPYVMVTPFDAELFGHWWFEGPEWIEALYEQGADR-VSFITPELYLQRHYQDFQTAH 390
Query: 402 LPEGSWGMFGTHYTWWNPDVEWTWPIIHKAEDRMIALATKYSGKDSLADRVLRQLSRELL 461
+ +WG G + W N W + H+ E + + Y L + ++Q+ RE +
Sbjct: 391 VSFSTWGRDGYGHVWLNDHNAWMYRHYHRMEKDLAKIVAMYPQPTVLEKQAIQQMVREWM 450
Query: 462 LLEASDWQFLMTTGQAREYGAKRILEHAHNFHTLANLLEE 501
L +SDW F++ A +Y ++R EH F T+ + L E
Sbjct: 451 LAVSSDWAFILDGQTAAQYASERFHEHVRRFDTIQSALLE 490
>pir||B70859 hypothetical protein Rv3031 - Mycobacterium tuberculosis (strain
H37RV) >gi|2791629|emb|CAA16116.1| (AL021287)
hypothetical protein Rv3031 [Mycobacterium tuberculosis]
Length = 526
Score = 201 bits (507), Expect = 1e-50
Identities = 154/523 (29%), Positives = 230/523 (43%), Gaps = 64/523 (12%)
Query: 3 GYLTFVLHTHIPYVRKHGKWPFGEEWLFEAISESYVPLLIELEKLKEKGVKFELVISFTP 62
G T VLHTH+P++ HG+WP GEEWL+++ + +Y+PLL L L ++ + + TP
Sbjct: 10 GLFTLVLHTHLPWLAHHGRWPVGEEWLYQSWAAAYLPLLQVLAALADENRHRLITLGMTP 69
Query: 63 VLLEQLNDEY-------------IKAEFNRYMERKIKLMKEDLKKADGKLRNAIEFM--- 106
V+ QL+D Y ++AE + + D + A
Sbjct: 70 VVNAQLDDPYCLNGVHHWLANWQLRAEEAASVRYARQSKSADYPSCTPEALRAFGIRECA 129
Query: 107 --IKYFEDVYEYWSKINGDIIGRFKQLQDEGFVEIITSAATHGYLPLLGRDEAIDAQILT 164
+ ++ W ++ + L D G VE++ H + PLL + +
Sbjct: 130 DAARALDNFATRWRHGGSPLL---RGLIDAGTVELLGGPLAHPFQPLLA-PRLREFALRE 185
Query: 165 GIRVYEKYFGKKPRGIWLPECAYRPDGLWKSPSTGEIKWRKGIEHFLKKYGLEFFFVESH 224
G+ + +P+GIW PECAY P G+E G+ SH
Sbjct: 186 GLADAQLRLAHRPKGIWAPECAYAP----------------GMEVDYATAGV------SH 223
Query: 225 LIDEGPATSKYGVTLPAKTKKSTLRPYFLKNGVVVFARNRETGIQVWSADIGYPGDPWYR 284
+ +GP S +G T + T VV F R+ + +VWS GYPG YR
Sbjct: 224 FMVDGP--SLHGDTALGRPVGKT--------DVVAFGRDLQVSYRVWSPKSGYPGHAAYR 273
Query: 285 EFHKKAEKSGGQYWRVTGTK-DLGAKEPYEPEKAMERVEEHANHFLNLVSSLLEEFKEKE 343
+FH +G + RVTG K PY+PE+A V+ H F+++V + L E+
Sbjct: 274 DFHTYDHLTGLKPARVTGRNVPSEQKAPYDPERADRAVDVHVADFVDVVRNRLLSESERI 333
Query: 344 GELGIVVAPYDTELFGHWWFEGVKWLARVLELAQDKGIKTIGISNFLKE-FRGKKFEIEL 402
G V+A +DTELFGHWW+EG WL RVL G++ +S+ + + F G +EL
Sbjct: 334 GRPAHVIAAFDTELFGHWWYEGPTWLQRVLRALPAAGVRVGTLSDAIADGFVGD--PVEL 391
Query: 403 PEGSWGMFGTHYTWWNPDVEWTWPIIHKAEDRMI-----ALATKYSGKDSL-ADRVLRQL 456
P SWG W V + + D + ALA S L D V Q+
Sbjct: 392 PPSSWGSGKDWQVWSGAKVADLVQLNSEVVDTALTTIDKALAQTASLDGPLPRDHVADQI 451
Query: 457 SRELLLLEASDWQFLMTTGQAREYGAKRILEHAHNFHTLANLL 499
RE LL +SDW F+++ A +Y R HAH +A L
Sbjct: 452 LRETLLTVSSDWPFMVSKDSAADYARYRAHLHAHATREIAGAL 494
>pir||D71334 conserved hypothetical protein TP0358 - syphilis spirochete
>gi|3322636|gb|AAC65344.1| (AE001215) conserved
hypothetical protein [Treponema pallidum]
Length = 526
Score = 143 bits (356), Expect = 7e-33
Identities = 135/555 (24%), Positives = 221/555 (39%), Gaps = 61/555 (10%)
Query: 5 LTFVLHTHIPYVRKHGKWPF-GEEWLFEAISESYVPLLIELEKLKEKGVKFELVISFTPV 63
L FVL ++P+VR G E F IS +Y+PLL E L+ + V F + ++ PV
Sbjct: 9 LAFVLDCNLPFVRGAGASSLLAESRFFLEISYTYLPLLRLCETLERERVPFNISLAIGPV 68
Query: 64 LLEQLNDEYIKAEFNRYMERKIKLMKEDLKKADGKLRNAI--EFMIKYFEDVYEYWSKIN 121
L E L + + + R ++ I+ + + + L+ + E +++ +Y+ +
Sbjct: 69 LCEMLANRVLMDRYRRALDALIEFGEREAIRLRNSLQERVQAEAVLRSLRSHRDYFDHCD 128
Query: 122 GDIIGRFKQLQDEGFVEIITSAATHGYLPLL-GRDEAIDAQILTGIRVYEKYFGKKPRGI 180
G ++ R G +E++ + A + +LP E+I AQI G+ Y K+F PRG
Sbjct: 129 GALLERINHFFRTGSIELLATTAVNCFLPFYQDMPESISAQIXMGLINYRKHFSSIPRGF 188
Query: 181 WLPECAYRPDGLWKSPSTGEIKWRKGIEHFLKKYGLEFFFVESHLIDEGPATSKYGVTLP 240
+LPE Y P +E +K YG + +E+H G + G+ P
Sbjct: 189 YLPELGYAP----------------ALERTIKSYGFSYTILETHSFLFGTRVPRRGIFEP 232
Query: 241 AKTKKSTLRPYFLKNGVVVFARNRETGIQVWSA---------------DIGY--PGDPWY 283
A+T NG+ ++R +V A D G+ P + Y
Sbjct: 233 AQTS----------NGLWCLGKDRVATAEVHGATHSFCTQAVYGNTEQDAGFILPEEALY 282
Query: 284 REF--HKKAEKSGGQYWRVTGTKDLGAKEPYEPEKAMERVEEHANHFLNLVSSLLEEFKE 341
F HK+ +G Y +GT PYE EKA A F+ + + E+
Sbjct: 283 PLFEPHKERMATGYLYQARSGT-------PYEQEKAQRTCVADARAFVRNRTEIFEKVVH 335
Query: 342 KEGEL-GIVVAPYDTELFGHWWFEGVKWLARVLELAQDKGIKTIGISNFLKEFRGKKFEI 400
+ V + LFG W EG+ WL V + + + L I
Sbjct: 336 ATAPFEAMSVCVFPASLFGVAWAEGMDWLEAVFRTVAESAQMRVSCTAALTCPAVGVSII 395
Query: 401 ELPEGSWGMFGTHYTWWNPDVEWTWPIIHKAEDRMIALATKYSGKDSLADRVLRQLSREL 460
E GS G N +W P I K +RMI L +++ +R+L +R++
Sbjct: 396 EPFFGSSLGGGYADELINSANDWMHPAIQKTTERMIDLTERFAHDTGFRERLLNMAARDV 455
Query: 461 LLLEASDWQFLMTTGQAREYGAKRILEHAHNFHTLANLLEEYFEQGTFDVELLEELEEKD 520
LL ++ W L + EY A +H F + E G + L E +
Sbjct: 456 LLCQSLFWPLLGNHCRYPEYAASECADHLKAF----TRVYEALGSGEVSAQWLMRREREL 511
Query: 521 NLFQEVPVEAYISKE 535
LF E+ + K+
Sbjct: 512 PLFSEINFRFFSKKK 526
>pir||T45394 hypothetical protein MLCB637.01c [imported] - Mycobacterium leprae
(fragment) >gi|2414527|emb|CAB16416.1| (Z99263)
hypothetical protein MLCB637.01c [Mycobacterium leprae]
Length = 338
Score = 134 bits (333), Expect = 4e-30
Identities = 102/367 (27%), Positives = 159/367 (42%), Gaps = 57/367 (15%)
Query: 3 GYLTFVLHTHIPYVRKHGKWPFGEEWLFEAISESYVPLLIELEKLKEKGVKFELVISFTP 62
G T VLHTH+P++ HG+WP GEEWL+++ + +Y+PLL L L ++ + + TP
Sbjct: 10 GLFTLVLHTHLPWLAHHGRWPVGEEWLYQSWAAAYLPLLQVLHTLADENRHRLITLGVTP 69
Query: 63 VLLEQLNDEYIKAEFNRYM-----------------ERKIKLMKEDLKKADGKLRNAIEF 105
V+ QL+D Y + ++ E K + L+ + +
Sbjct: 70 VVNAQLDDPYCLDGMHHWLANWRLRATEAASVRSGSESKPACAPQALRAFGARECIEAQR 129
Query: 106 MIKYFEDVYEYWSKINGDIIGRFKQLQDEGFVEIITSAATHGYLPLLGRDEAIDAQILTG 165
++YF ++ + + L D G VE++ H + PL+ + + G
Sbjct: 130 ALEYFATLWRHGGS------PLLRSLIDAGTVELLGGPLAHPFQPLIA-PRLREFALHEG 182
Query: 166 IRVYEKYFGKKPRGIWLPECAYRPDGLWKSPSTGEIKWRKGIEHFLKKYGLEFFFVESHL 225
+ +P GIW PECAY P G+EH G+ F V+
Sbjct: 183 LDDAWLRLAHRPTGIWAPECAYAP----------------GMEHDYSAAGITHFMVD--- 223
Query: 226 IDEGPATSKYGVTLPAKTKKSTLRPYFLKNGVVVFARNRETGIQVWSADIGYPGDPWYRE 285
GP S +G T + T VV F R+ + +VWS GYPG YR+
Sbjct: 224 ---GP--SLHGDTALGRPVGDT--------AVVAFGRDLQVSYRVWSPKSGYPGHAAYRD 270
Query: 286 FHKKAEKSGGQYWRVTGTK-DLGAKEPYEPEKAMERVEEHANHFLNLVSSLLEEFKEKEG 344
FH +G + RVTG AK PY+P+ A + V+ H + F+ +V + L E+ G
Sbjct: 271 FHTYDHLTGLKPARVTGCNVPSEAKAPYDPDHADKVVDAHVDDFVGVVRNRLFTESERIG 330
Query: 345 ELGIVVA 351
VVA
Sbjct: 331 RPAHVVA 337
>pir||T43949 hypothetical protein [imported] - Thermus thermophilus (fragment)
>gi|2696109|dbj|BAA23880.1| (AB006681) unnamed protein
product [Thermus thermophilus]
Length = 167
Score = 126 bits (314), Expect = 6e-28
Identities = 63/161 (39%), Positives = 98/161 (60%), Gaps = 2/161 (1%)
Query: 58 ISFTPVLLEQLNDEYIKAEFNRYMERKIKLMKEDLKKADGK-LRNAIEFMIKYFEDVYEY 116
+ TP+L EQL D IK F Y + +++ + D ++ G L + + ++E ++
Sbjct: 7 LGITPILAEQLADPRIKEGFWAYAKDRLERAQGDYQRYRGTALEASARHQVAFWELTLDH 66
Query: 117 WSKINGDIIGRFKQLQDEGFVEIITSAATHGYLPLLGRDEAIDAQILTGIRVYEKYFGKK 176
+ +++GD++ F++ ++ G VE+ITS ATHGY PLLG DEA+ AQI TG+ Y ++F K
Sbjct: 67 FQRLSGDLVAAFRKAEEGGQVELITSNATHGYSPLLGYDEALWAQIKTGVSTYRRHFAKD 126
Query: 177 PRGIWLPECAYRPDGLWKSPSTGEIKW-RKGIEHFLKKYGL 216
P G WLPE AYRP G WK P G + R G++ L + G+
Sbjct: 127 PTGFWLPEMAYRPRGPWKPPVEGPPEGVRPGVDELLMRAGI 167
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.317 0.138 0.423
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 249572706
Number of Sequences: 2977
Number of extensions: 11876091
Number of successful extensions: 40895
Number of sequences better than 1.0e-10: 8
Number of HSP's better than 0.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 40851
Number of HSP's gapped (non-prelim): 12
length of query: 602
length of database: 189,106,746
effective HSP length: 54
effective length of query: 548
effective length of database: 156,788,448
effective search space: 85920069504
effective search space used: 85920069504
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.6 bits)
S2: 168 (69.9 bits)