BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB1859 713676 712621 -352 !not a gene!
(352 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||G75119 pyruvate formate-lyase activating enzyme related pro... 749 0.0
pir||A71012 hypothetical protein PH1391 - Pyrococcus horikoshii ... 707 0.0
sp|Q58218|Y808_METJA HYPOTHETICAL PROTEIN MJ0808 >gi|2128519|pir... 368 e-101
pir||G70460 conserved hypothetical protein aq_1861 - Aquifex aeo... 347 9e-95
gi|11498928 pyruvate formate-lyase activating enzyme (act-3) [Ar... 336 2e-91
pir||A72573 hypothetical protein APE1865 - Aeropyrum pernix (str... 336 3e-91
pir||F69052 pyruvate formate-lyase activating enzyme related pro... 332 6e-90
pir||C72239 hypothetical protein TM1552 - Thermotoga maritima (s... 327 1e-88
gb|AAK40958.1| Conserved hypothetical protein [Sulfolobus solfat... 308 8e-83
emb|CAB57649.1| (Y18930) hypothetical protein [Sulfolobus solfat... 308 8e-83
emb|CAC11393.1| (AL445063) conserved hypothetical protein [Therm... 273 2e-72
pir||C70646 probable pflA protein - Mycobacterium tuberculosis (... 272 5e-72
gi|11499859 pyruvate formate-lyase activating enzyme (act-4) [Ar... 257 2e-67
pir||B71052 hypothetical protein PH1113 - Pyrococcus horikoshii ... 81 2e-14
pir||B75091 pyruvate formate-lyase activating enzyme (pflx) PAB0... 80 5e-14
pir||F72279 conserved hypothetical protein - Thermotoga maritima... 74 3e-12
pir||F69230 pyruvate formate-lyase activating enzyme related pro... 71 2e-11
gi|11497737 pyruvate formate-lyase activating enzyme (act-1) [Ar... 70 3e-11
pir||F64503 hypothetical protein MJ1632 - Methanococcus jannasch... 70 5e-11
gb|AAB88388.1| (AF034788) hypothetical protein [Methanococcus ma... 70 5e-11
>pir||G75119 pyruvate formate-lyase activating enzyme related protein
(act-like) PAB1859 - Pyrococcus abyssi (strain Orsay)
>gi|5458183|emb|CAB49672.1| (AJ248285) pyruvate
formate-lyase activating enzyme related protein
(act-like) [Pyrococcus abyssi]
Length = 348
Score = 749 bits (1914), Expect = 0.0
Identities = 348/348 (100%), Positives = 348/348 (100%)
Query: 5 MREAMYWKPLGGGRVRCELCPLRCIIDEGKRGSCKIRINKGGKLYTLNYGKVSSIALDPI 64
MREAMYWKPLGGGRVRCELCPLRCIIDEGKRGSCKIRINKGGKLYTLNYGKVSSIALDPI
Sbjct: 1 MREAMYWKPLGGGRVRCELCPLRCIIDEGKRGSCKIRINKGGKLYTLNYGKVSSIALDPI 60
Query: 65 EKKPLFHFWPGSCAFSIGTVGCNMHCKHCQNWEISQADENFPYLQDATPEAIVRLAKHYE 124
EKKPLFHFWPGSCAFSIGTVGCNMHCKHCQNWEISQADENFPYLQDATPEAIVRLAKHYE
Sbjct: 61 EKKPLFHFWPGSCAFSIGTVGCNMHCKHCQNWEISQADENFPYLQDATPEAIVRLAKHYE 120
Query: 125 CESIAYTYNEPTIWYEFVLDTAKLAKKEGLNNILVTNGYINEEPFRELAPYIDAMNIDIK 184
CESIAYTYNEPTIWYEFVLDTAKLAKKEGLNNILVTNGYINEEPFRELAPYIDAMNIDIK
Sbjct: 121 CESIAYTYNEPTIWYEFVLDTAKLAKKEGLNNILVTNGYINEEPFRELAPYIDAMNIDIK 180
Query: 185 AFDDRFYMKIASVPNGEPSRRIAKIAKKEFGIHVELTYLIIPTLNDKEEEIRAFARWVVD 244
AFDDRFYMKIASVPNGEPSRRIAKIAKKEFGIHVELTYLIIPTLNDKEEEIRAFARWVVD
Sbjct: 181 AFDDRFYMKIASVPNGEPSRRIAKIAKKEFGIHVELTYLIIPTLNDKEEEIRAFARWVVD 240
Query: 245 ELGSDTPVHFSRFFPHYKLLNLPPTPIETLEKAYKIAKEEGLKFVYLGNVPGHEGENTYC 304
ELGSDTPVHFSRFFPHYKLLNLPPTPIETLEKAYKIAKEEGLKFVYLGNVPGHEGENTYC
Sbjct: 241 ELGSDTPVHFSRFFPHYKLLNLPPTPIETLEKAYKIAKEEGLKFVYLGNVPGHEGENTYC 300
Query: 305 PRCGRLLIERWGFEVLKYNIEDGKCKYCGEKIPIVGKYQRKVYRGMWW 352
PRCGRLLIERWGFEVLKYNIEDGKCKYCGEKIPIVGKYQRKVYRGMWW
Sbjct: 301 PRCGRLLIERWGFEVLKYNIEDGKCKYCGEKIPIVGKYQRKVYRGMWW 348
>pir||A71012 hypothetical protein PH1391 - Pyrococcus horikoshii
>gi|3257814|dbj|BAA30497.1| (AP000006) 348aa long
hypothetical protein [Pyrococcus horikoshii]
Length = 348
Score = 707 bits (1804), Expect = 0.0
Identities = 324/348 (93%), Positives = 337/348 (96%)
Query: 5 MREAMYWKPLGGGRVRCELCPLRCIIDEGKRGSCKIRINKGGKLYTLNYGKVSSIALDPI 64
MREAMYWKPLG GRVRCELCPLRCIIDEGKRGSCKIRINKGGKLYTLNYGKVSSIALDPI
Sbjct: 1 MREAMYWKPLGDGRVRCELCPLRCIIDEGKRGSCKIRINKGGKLYTLNYGKVSSIALDPI 60
Query: 65 EKKPLFHFWPGSCAFSIGTVGCNMHCKHCQNWEISQADENFPYLQDATPEAIVRLAKHYE 124
EKKPLFHFWPGSCA SIGTVGCNMHCKHCQNWEISQADE+FPYLQDATPEAIV LAKHYE
Sbjct: 61 EKKPLFHFWPGSCALSIGTVGCNMHCKHCQNWEISQADESFPYLQDATPEAIVSLAKHYE 120
Query: 125 CESIAYTYNEPTIWYEFVLDTAKLAKKEGLNNILVTNGYINEEPFRELAPYIDAMNIDIK 184
CESIAYTYNEPTIWYEFVLDTAKLA+KEGLNNILVTNGYINEEPFRELAPYIDAMNIDIK
Sbjct: 121 CESIAYTYNEPTIWYEFVLDTAKLARKEGLNNILVTNGYINEEPFRELAPYIDAMNIDIK 180
Query: 185 AFDDRFYMKIASVPNGEPSRRIAKIAKKEFGIHVELTYLIIPTLNDKEEEIRAFARWVVD 244
AFDD+FYMKIASVP+GEPSRRIA+IAKKEF IHVELTYLIIPTLNDKEEEIR FARWVV+
Sbjct: 181 AFDDKFYMKIASVPSGEPSRRIAEIAKKEFKIHVELTYLIIPTLNDKEEEIREFARWVVE 240
Query: 245 ELGSDTPVHFSRFFPHYKLLNLPPTPIETLEKAYKIAKEEGLKFVYLGNVPGHEGENTYC 304
LG DTPVHFSRFFPHYKLLNLPPTPIETLEKAYKIAKEEGLKFVYLGNVPGH GENTYC
Sbjct: 241 NLGDDTPVHFSRFFPHYKLLNLPPTPIETLEKAYKIAKEEGLKFVYLGNVPGHPGENTYC 300
Query: 305 PRCGRLLIERWGFEVLKYNIEDGKCKYCGEKIPIVGKYQRKVYRGMWW 352
P CG+LLIERWGF++++Y+I DGKCKYCGEKIPIVGKYQ+K YRGMWW
Sbjct: 301 PSCGKLLIERWGFDIIRYDIVDGKCKYCGEKIPIVGKYQKKKYRGMWW 348
>sp|Q58218|Y808_METJA HYPOTHETICAL PROTEIN MJ0808 >gi|2128519|pir||H64400 hypothetical
protein MJ0808 - Methanococcus jannaschii
>gi|1499631|gb|AAB98808.1| (U67525)
pyruvate-formate-lyase-activating enzyme (act)
[Methanococcus jannaschii]
Length = 333
Score = 368 bits (934), Expect = e-101
Identities = 182/338 (53%), Positives = 235/338 (68%), Gaps = 9/338 (2%)
Query: 5 MREAMYWKPLGGGRVRCELCPLRCIIDEGKRGSCKIRINKGGKLYTLNYGKVSSIALDPI 64
MREAM+++ L +VRC +CP CII EG+RG C R N G LY + YGKV S+A+DPI
Sbjct: 1 MREAMFYEKLDDNKVRCHICPRHCIIKEGERGFCWNRENINGVLYAVGYGKVCSLAIDPI 60
Query: 65 EKKPLFHFWPGSCAFSIGTVGCNMHCKHCQNWEISQ-ADENFPYLQDATPEAIVRLAKHY 123
EKKPLFHF+P + S+ GCN C HCQNW ISQ + PY ++ TPE IV +A Y
Sbjct: 61 EKKPLFHFYPTTQVVSLAIGGCNFRCLHCQNWTISQFPPDEIPY-REMTPEEIVEVAIRY 119
Query: 124 ECESIAYTYNEPTIWYEFVLDTAKLAKKEGLNNILVTNGYINEEPFRELAPYIDAMNIDI 183
C I+YTY EPT++YEF+ DT+ +A++ G+ N+++TNGYI +EP + L +DAMNIDI
Sbjct: 120 NCPGISYTYTEPTVYYEFMYDTSVIARENGMFNVMITNGYIEKEPLKALP--VDAMNIDI 177
Query: 184 KAFDDRFYMKIASVPNGEPSRRIAKIAKKEFGIHVELTYLIIPTLNDKEEEIRAFARWVV 243
K D FY K+ EP K+AKK GI VE+T LI+P ND +++ +V
Sbjct: 178 KGNAD-FYKKVCKA-TLEPVLETCKLAKK-LGIWVEVTNLIVPNYNDNIDDLLFIIHFVR 234
Query: 244 DELGSDTPVHFSRFFPHYKLLNLPPTPIETLEKAYKIAKEEGLKFVYLGNVPGHEGENTY 303
DELG +TP+HFSRF P YKL ++PPTPIETLE A +A EEGLK+VY+GNVPGHEGENTY
Sbjct: 235 DELGRETPLHFSRFHPDYKLTDVPPTPIETLEMARNLAIEEGLKYVYIGNVPGHEGENTY 294
Query: 304 CPRCGRLLIERWGF--EVLKYNIEDGKCKYCGEKIPIV 339
CP CG LLIER+ F +++ ++E +CK CGEKI IV
Sbjct: 295 CPNCGALLIERYIFNAKIINLDVETKRCKICGEKIDIV 332
>pir||G70460 conserved hypothetical protein aq_1861 - Aquifex aeolicus
>gi|2984148|gb|AAC07683.1| (AE000760) hypothetical
protein [Aquifex aeolicus]
Length = 342
Score = 347 bits (882), Expect = 9e-95
Identities = 172/341 (50%), Positives = 229/341 (66%), Gaps = 9/341 (2%)
Query: 7 EAMYWKPLGGGRVRCELCPLRCIIDEGKRGSCKIRINKGGKLYTLNYGKVSSIALDPIEK 66
EA +WK L G+V C LCP+ C + EG GSC +R N GGKLYT YG + S A+DP+EK
Sbjct: 4 EAKWWKKLDDGKVECYLCPVSCKLKEGSVGSCGVRANVGGKLYTFTYGSLISAAIDPVEK 63
Query: 67 KPLFHFWPGSCAFSIGTVGCNMHCKHCQNWEISQADENFPY---LQDAT---PEAIVRLA 120
KPLFHF PG +I T GCN+HCK CQNWEISQ + + D T PE IV A
Sbjct: 64 KPLFHFLPGHRTLTIATPGCNLHCKGCQNWEISQVPKGEVFKNRFYDETFVPPEVIVEKA 123
Query: 121 KHYECESIAYTYNEPTIWYEFVLDTAKLAKKEGLNNILVTNGYINEEPFRELAPYIDAMN 180
+ CESI+Y+Y++PTI+ E+++D A+LAK++GL NI+VT GYIN EP E+ Y+DA +
Sbjct: 124 IEHGCESISYSYSDPTIFAEYMIDVARLAKEKGLKNIMVTAGYINPEPLEEIDKYMDAYS 183
Query: 181 IDIKAFDDRFYMKIASVPNGEPSRRIAKIAKKEFGIHVELTYLIIPTLNDKEEEIRAFAR 240
ID+K FDD+ Y + S EP K A + G VELT L++P EE+I+ A
Sbjct: 184 IDLKFFDDKAYREY-SKGRLEPVLETIKYAFNK-GKWVELTTLLVPKYLT-EEQIKKIAE 240
Query: 241 WVVDELGSDTPVHFSRFFPHYKLLNLPPTPIETLEKAYKIAKEEGLKFVYLGNVPGHEGE 300
W+ EL P H SRFFPHYK L+LPPTP+E L KAYKI K+ GL++V++GN+ G++ E
Sbjct: 241 WIGSELAPWVPWHLSRFFPHYKALDLPPTPVEDLMKAYKIGKDAGLEYVFVGNLFGNDYE 300
Query: 301 NTYCPRCGRLLIERWGFEVLKYNIEDGKCKYCGEKIPIVGK 341
+TYCP+CG ++I R G+ + + N+EDGKCK CG +I + K
Sbjct: 301 STYCPKCGNVVIGRQGYYITEINLEDGKCKNCGYEIKGIWK 341
>gi|11498928 pyruvate formate-lyase activating enzyme (act-3) [Archaeoglobus
fulgidus] >gi|7429685|pir||A69416 pyruvate formate-lyase
activating enzyme (act-3) homolog - Archaeoglobus
fulgidus >gi|2649248|gb|AAB89917.1| (AE001012) pyruvate
formate-lyase activating enzyme (act-3) [Archaeoglobus
fulgidus]
Length = 336
Score = 336 bits (853), Expect = 2e-91
Identities = 164/320 (51%), Positives = 211/320 (65%), Gaps = 6/320 (1%)
Query: 17 GRVRCELCPLRCIIDEGKRGSCKIRINKGGKLYTLNYGKVSSIALDPIEKKPLFHFWPGS 76
G VRC+ C RCII EGK G C++R N+GG+L LNYG SSIALDPIEKKPL +F PGS
Sbjct: 13 GDVRCKTCWHRCIIKEGKTGICRVRKNEGGELLVLNYGMASSIALDPIEKKPLNNFKPGS 72
Query: 77 CAFSIGTVGCNMHCKHCQNWEISQADENFPYLQDATPEAIVRLAKHYECESIAYTYNEPT 136
S G+V CN C HCQN+EI+ AD ++ YL++ P+ ++R+ + +A+TYNEP
Sbjct: 73 KVLSFGSVSCNFRCLHCQNFEIAFADLDYSYLREIDPDTVLRMCIDRRADGVAWTYNEPA 132
Query: 137 IWYEFVLDTAKLAKKEGLNNILVTNGYINEEPFRELAPYIDAMNIDIKAFDDRFYMKIAS 196
IW+EF LD++KL K+ G + VTNGY+ E + +DA N+D+KAF + FY KI
Sbjct: 133 IWHEFALDSSKLVKESGYYVVYVTNGYMTPEAVDQFEGVLDAANVDVKAFSEDFYKKICK 192
Query: 197 VPNGEPSRRIAKIAKKEFGIHVELTYLIIPTLNDKEEEIRAFARWVVDELGSDTPVHFSR 256
+ + +K G+ VELTYLIIP ND EE+R F RWV D L PVHFSR
Sbjct: 193 AKLEHVLETVEYLHRK--GVFVELTYLIIPGENDSREELRDFCRWVAD-LSPKIPVHFSR 249
Query: 257 FFPHYKLLNLPPTPIETLEKAYKIAKEEGLKFVYLGNVPGHEGENTYCPRCGRLLIERWG 316
F P YK+L+ PPTP+E +E+A +IAK+EG+++VY GNV GH ENTYCP CG LLIER G
Sbjct: 250 FHPDYKMLDKPPTPVEKIEEAVEIAKKEGIEYVYAGNVWGHRYENTYCPNCGELLIEREG 309
Query: 317 FEVLKYNI---EDGKCKYCG 333
F V N+ KC CG
Sbjct: 310 FYVYNINLVRDNPPKCPNCG 329
>pir||A72573 hypothetical protein APE1865 - Aeropyrum pernix (strain K1)
>gi|5105557|dbj|BAA80870.1| (AP000062) 370aa long
hypothetical protein [Aeropyrum pernix]
Length = 370
Score = 336 bits (852), Expect = 3e-91
Identities = 173/345 (50%), Positives = 226/345 (65%), Gaps = 7/345 (2%)
Query: 4 NMREAMYWKPLGGGR---VRCELCPLRCIIDEGKRGSCKIRINKGGKLYTLNYGKVSSIA 60
++R+A W L G+ VRC+LC RC+I GK G+C +R N GG+LYTL YG +S+
Sbjct: 15 HVRKARLWVKLSDGKEGWVRCDLCQRRCVIAPGKYGACGVRKNIGGELYTLVYGLLSASN 74
Query: 61 LDPIEKKPLFHFWPGSCAFSIGTVGCNMHCKHCQNWEISQAD-ENFPYLQDATPEAIVRL 119
+DPIEKKPL HF+PGS SI TVGCN C+ CQN+EISQ+ E Y TPE +VRL
Sbjct: 75 IDPIEKKPLLHFYPGSTVLSISTVGCNFFCQFCQNFEISQSRLEKGLYGVYRTPEEVVRL 134
Query: 120 AKHYECESIAYTYNEPTIWYEFVLDTAKLAKKEGLNNILVTNGYINEEPFRELAPYIDAM 179
A Y + I YTYNEPTI++E V D AK AKK GL N +VTNGY+ E EL IDA
Sbjct: 135 ALVYGADGITYTYNEPTIFFETVYDVAKEAKKHGLFNTMVTNGYMTPEAVDELGSLIDAA 194
Query: 180 NIDIKAFDD-RFYMKIASVPNGEPSRRIAKIAKKEFGIHVELTYLIIPTLNDKEEEIRAF 238
+D K D FY KI VP+ EP A +A K+ G +E+T L++P L DK E +R
Sbjct: 195 TVDFKGGGDPEFYRKIMFVPDPEPIYE-AILAMKDKGWWIEITNLVVPILGDKPEYVRRM 253
Query: 239 ARWVVDELGSDTPVHFSRFFPHYKLLNLPPTPIETLEKAYKIAKEEGLKFVYLGNVPGHE 298
ARW+V+ LG + P H RF P YKL ++P TP++TLEK +IA EEGLK VY+GNV GH
Sbjct: 254 ARWIVENLGPEVPFHLLRFHPDYKLRHVPHTPVKTLEKLARIAMEEGLKHVYIGNVWGHP 313
Query: 299 GENTYCPRCGRLLIERWGFEVLKYNI-EDGKCKYCGEKIPIVGKY 342
E+TYCP+CG +++R GF ++++ + D +C CG K+ G+Y
Sbjct: 314 LEDTYCPKCGYKVVDREGFAIVEWRLTSDFRCPRCGYKLNFRGEY 358
>pir||F69052 pyruvate formate-lyase activating enzyme related protein -
Methanobacterium thermoautotrophicum (strain Delta H)
>gi|2622506|gb|AAB85872.1| (AE000902) pyruvate
formate-lyase activating enzyme related protein
[Methanobacterium thermoautotrophicum]
Length = 335
Score = 332 bits (841), Expect = 6e-90
Identities = 151/323 (46%), Positives = 220/323 (67%), Gaps = 4/323 (1%)
Query: 18 RVRCELCPLRCIIDEGKRGSCKIRINKGGKLYTLNYGKVSSIALDPIEKKPLFHFWPGSC 77
R+RC +C +C+I EG RG C R N+ G++Y+L YG+VSS A+DPIEKKPLFHF PG+
Sbjct: 14 RLRCLVCNRKCLIPEGGRGYCLTRENRDGRIYSLTYGEVSSAAVDPIEKKPLFHFHPGTL 73
Query: 78 AFSIGTVGCNMHCKHCQNWEISQAD-ENFPYLQDATPEAIVRLAKHYECESIAYTYNEPT 136
A+S+G+VGCN C++CQNW ISQA + FP + +PE V A C SIA+TYNEPT
Sbjct: 74 AYSLGSVGCNFRCRYCQNWSISQARIDEFP-TRYISPEEAVENALSASCRSIAWTYNEPT 132
Query: 137 IWYEFVLDTAKLAKKEGLNNILVTNGYINEEPFRELAPYIDAMNIDIKAFDDRFYMKIAS 196
+W E+ LD+A+LA+ EGL+ + VTNGY++ E L P +DA N+D+K + FY ++
Sbjct: 133 MWLEYTLDSAELARAEGLSTVYVTNGYMSREALDILGPLLDAANVDLKGMSETFYRELCD 192
Query: 197 VPNGEPSRRIAKIAKKEFGIHVELTYLIIPTLNDKEEEIRAFARWVVDELGSDTPVHFSR 256
G I ++ + GIH+E+T L+IP ND +++I A ++V E+G P+HF+R
Sbjct: 193 AKPGPVLENIIRM--HDMGIHIEVTNLLIPGYNDSDDDIMALINFMVSEVGVRVPLHFTR 250
Query: 257 FFPHYKLLNLPPTPIETLEKAYKIAKEEGLKFVYLGNVPGHEGENTYCPRCGRLLIERWG 316
FFPHY++ ++PPT + L +A ++A E G+K+VY+GN+PG + ENTYCP CG ++I R G
Sbjct: 251 FFPHYRMQDVPPTGTDRLMRARELALEAGMKYVYVGNLPGTDAENTYCPSCGEVVIRRNG 310
Query: 317 FEVLKYNIEDGKCKYCGEKIPIV 339
+ + DG+C+ C KI +V
Sbjct: 311 YITDTSGLADGRCRSCNSKIDVV 333
>pir||C72239 hypothetical protein TM1552 - Thermotoga maritima (strain MSB8)
>gi|4982119|gb|AAD36618.1|AE001801_5 (AE001801) pyruvate
formate-lyase activating enzyme, putative [Thermotoga
maritima]
Length = 331
Score = 327 bits (829), Expect = 1e-88
Identities = 169/337 (50%), Positives = 227/337 (67%), Gaps = 13/337 (3%)
Query: 6 REAMYWKPLGGGRVRCELCPLRCIIDEGKRGSCKIRINKGGKLYTLNYGKVSSIALDPIE 65
R A++++ L G+V+C LCP C++D G+ G C +R NK G L +LNYG+V++IA+DPIE
Sbjct: 3 RMALHFEILENGKVKCLLCPHECVLDNGQIGLCGVRKNKNGSLVSLNYGEVTAIAMDPIE 62
Query: 66 KKPLFHFWPGSCAFSIGTVGCNMHCKHCQNWEISQADENFPYLQDATPEAIVRLAK-HYE 124
KKPLFHF PG FS+GT GCN C CQNWEISQA P + TPE +V++A+ +
Sbjct: 63 KKPLFHFNPGEQIFSVGTFGCNFKCGFCQNWEISQAK---PETKRVTPEQLVKIAQMNRN 119
Query: 125 CESIAYTYNEPTIWYEFVLDTAKLAKKEGLNNILVTNGYINEEPFRELAPYIDAMNIDIK 184
+ IA+TYNEP +WYEFVLDT+++A +EG+ +LVTNG+INEEP L + AMNID+K
Sbjct: 120 SKGIAFTYNEPLVWYEFVLDTSRVAVREGMYCVLVTNGFINEEPLELLFQSVHAMNIDLK 179
Query: 185 AFDDRFYMKIASVPNGEPSRRIAKIAK-KEFGIHVELTYLIIPTLNDKEEEIRAFARWVV 243
F+ FY +I G+ + I K GIHVELT LIIP ND +E++R W+
Sbjct: 180 GFNRDFYREI----GGDLDVVLRNIEKVYNAGIHVELTTLIIPGKNDDKEDLRREFEWIA 235
Query: 244 DELGSDTPVHFSRFFPHYKLLNLPPTPIETLEKAYKIAKEEGLKFVYLGNVPGHEGENTY 303
D L D P+H SR+FP+YK +PPTPIE L + Y++A+E L FVYLGNV E+T+
Sbjct: 236 D-LDKDIPLHISRYFPNYK-YTIPPTPIEELIEIYEMAREY-LNFVYLGNVWDERYESTF 292
Query: 304 CPRCGRLLIERWGFEVLKYNI-EDGKCKYCGEKIPIV 339
CP CG L+I R G+EV K + E+GKC CG +I +
Sbjct: 293 CPDCGNLVIRRQGYEVEKVGLDEEGKCTKCGRQIATI 329
>gb|AAK40958.1| Conserved hypothetical protein [Sulfolobus solfataricus]
Length = 351
Score = 308 bits (780), Expect = 8e-83
Identities = 156/345 (45%), Positives = 218/345 (62%), Gaps = 6/345 (1%)
Query: 6 REAMYWKPLGGGRVRCELCPLRCIIDEGKRGSCKIRINKGGKLYTLNYGKVSSIALDPIE 65
+EA+ +K GR+RC C +C+I EG+ G C +R + GKLY YGK+++ +DPIE
Sbjct: 3 KEAVLYKK-EDGRIRCLACARKCLIGEGQVGFCGVRSVRNGKLYLDVYGKIAAAHIDPIE 61
Query: 66 KKPLFHFWPGSCAFSIGTVGCNMHCKHCQNWEISQADENFPYLQDATPEAIVRLAKHYEC 125
KKPL HF PGS FS T GCN C +CQN++ISQ + + +PE IV LA Y+
Sbjct: 62 KKPLVHFNPGSKVFSFSTYGCNWMCMYCQNYDISQRRKAEGV--ELSPEEIVELAMGYDV 119
Query: 126 ESIAYTYNEPTIWYEFVLDTAKLAKKEGLNNILVTNGYINEEPFRELAPYIDAMNIDIKA 185
+ + YTYNEP I+ EF D +AK+ GL N +V+NGY + ++DA+ ID K
Sbjct: 120 DGMTYTYNEPAIFSEFAHDVGIVAKRYGLFNTMVSNGYWTPNLVDYVKDFLDAVTIDFKG 179
Query: 186 F-DDRFYMKIASVPNGEPSRRIAKIAKKEFGIHVELTYLIIPTLNDKEEEIRAFARWVVD 244
+ +F + + EP A K+ GIHVE+T LIIP + D + + + D
Sbjct: 180 NGEQKFLRRYTGATSAEPIIETASELSKK-GIHVEITDLIIPQIGDDLQAAKQLLTKLYD 238
Query: 245 ELGSDTPVHFSRFFPHYKLLNLPPTPIETLEKAYKIAKEEGLKFVYLGNVPGHEGENTYC 304
+LG+D P+HF RF P YKL +P TP+ETLE+ YK+AKE G KFVY+GNVPGH ENTYC
Sbjct: 239 QLGADIPIHFLRFHPDYKLNYIPWTPVETLERHYKLAKELGFKFVYVGNVPGHPYENTYC 298
Query: 305 PRCGRLLIERWGFEVLKYNI-EDGKCKYCGEKIPIVGKYQRKVYR 348
P CG L+I R+ F++L++++ ED +CK+CG K+PI GK R ++
Sbjct: 299 PNCGNLVIRRYSFDILEWHLTEDMRCKFCGYKLPIRGKLSRHAFK 343
>emb|CAB57649.1| (Y18930) hypothetical protein [Sulfolobus solfataricus]
Length = 351
Score = 308 bits (780), Expect = 8e-83
Identities = 156/345 (45%), Positives = 218/345 (62%), Gaps = 6/345 (1%)
Query: 6 REAMYWKPLGGGRVRCELCPLRCIIDEGKRGSCKIRINKGGKLYTLNYGKVSSIALDPIE 65
+EA+ +K GR+RC C +C+I EG+ G C +R + GKLY YGK+++ +DPIE
Sbjct: 3 KEAVLYKK-EDGRIRCLACARKCLIGEGQVGFCGVRSVRNGKLYLDVYGKIAAAHIDPIE 61
Query: 66 KKPLFHFWPGSCAFSIGTVGCNMHCKHCQNWEISQADENFPYLQDATPEAIVRLAKHYEC 125
KKPL HF PGS FS T GCN C +CQN++ISQ + + +PE IV LA Y+
Sbjct: 62 KKPLVHFNPGSKVFSFSTYGCNWMCMYCQNYDISQRRKAEGV--ELSPEEIVELAMGYDV 119
Query: 126 ESIAYTYNEPTIWYEFVLDTAKLAKKEGLNNILVTNGYINEEPFRELAPYIDAMNIDIKA 185
+ + YTYNEP I+ EF D +AK+ GL N +V+NGY + ++DA+ ID K
Sbjct: 120 DGMTYTYNEPAIFSEFAHDVGIVAKRYGLFNTMVSNGYWTPNLVDYVKDFLDAVTIDFKG 179
Query: 186 F-DDRFYMKIASVPNGEPSRRIAKIAKKEFGIHVELTYLIIPTLNDKEEEIRAFARWVVD 244
+ +F + + EP A K+ GIHVE+T LIIP + D + + + D
Sbjct: 180 NGEQKFLRRYTGATSAEPIIETASELSKK-GIHVEITDLIIPQIGDDLQAAKQLLTKLYD 238
Query: 245 ELGSDTPVHFSRFFPHYKLLNLPPTPIETLEKAYKIAKEEGLKFVYLGNVPGHEGENTYC 304
+LG+D P+HF RF P YKL +P TP+ETLE+ YK+AKE G KFVY+GNVPGH ENTYC
Sbjct: 239 QLGADIPIHFLRFHPDYKLNYIPWTPVETLERHYKLAKELGFKFVYVGNVPGHPYENTYC 298
Query: 305 PRCGRLLIERWGFEVLKYNI-EDGKCKYCGEKIPIVGKYQRKVYR 348
P CG L+I R+ F++L++++ ED +CK+CG K+PI GK R ++
Sbjct: 299 PNCGNLVIRRYSFDILEWHLTEDMRCKFCGYKLPIRGKLSRHAFK 343
>emb|CAC11393.1| (AL445063) conserved hypothetical protein [Thermoplasma
acidophilum]
Length = 359
Score = 273 bits (691), Expect = 2e-72
Identities = 143/326 (43%), Positives = 198/326 (59%), Gaps = 10/326 (3%)
Query: 19 VRCELCPLRCIIDEGKRGSCKIRINKGGKLYTLNYGKVSSIALDPIEKKPLFHFWPGSCA 78
V C C C + GK G C +R N G LY L YG ++I +DPIEKKP+ H +PG+
Sbjct: 30 VECTACSRYCRLKPGKTGFCGVRKNIDGDLYLLVYGLPAAINVDPIEKKPVLHMYPGARI 89
Query: 79 FSIGTVGCNMHCKHCQNWEISQADENFPYLQDATPEAIVRLAKHYECESIAYTYNEPTIW 138
FS+ TVGC+ C++CQN++ISQ Y D PE IV A C+ IAYTYNEP+I+
Sbjct: 90 FSLSTVGCSFACQYCQNYDISQRRTITGYHYD--PEEIVEEALSMGCQGIAYTYNEPSIF 147
Query: 139 YEFVLDTAKLAKKEGLNNILVTNGYINEEPFRELAPYIDAMNIDIKA-FDDRFYMKIASV 197
E+ D +A++ GL NI VTNG+ E ++DA +D K D FY K SV
Sbjct: 148 MEYAHDIGVIARRHGLINIFVTNGFETPEAIDYARDFLDAATVDFKGNASDEFYRKYISV 207
Query: 198 PNGEP-SRRIAKIAKKEFGIHVELTYLIIPTLNDKEEEIRAFARWVVDELGSDTPVHFSR 256
P+ P +A + K GIHVE+T L++P + D+ E+ R ++D LG P+ F R
Sbjct: 208 PSARPIFETLANL--KSAGIHVEVTDLVVPEVGDRLEDARTMLERIMDILGEYVPISFLR 265
Query: 257 FFPHYKLLNLPPTPIETLEKAYKIAKEEGLKFVYLGNVPGHEGENTYCPRCGRLLIERWG 316
F P Y++++LP TP+ETL K + +A G K+VY+GNVPG+ GENTYCP CG LLIER+
Sbjct: 266 FHPDYRMMDLPDTPVETLRKHHDLAVSMGFKYVYIGNVPGY-GENTYCPNCGNLLIERFV 324
Query: 317 FEVLKYNIE-DGKCKYCG--EKIPIV 339
F ++ +G+CK CG +IP++
Sbjct: 325 FSSKVIGLDRNGRCKKCGYDPQIPLM 350
>pir||C70646 probable pflA protein - Mycobacterium tuberculosis (strain H37RV)
>gi|3261696|emb|CAB06292.1| (Z83867) pflA [Mycobacterium
tuberculosis]
Length = 362
Score = 272 bits (688), Expect = 5e-72
Identities = 133/329 (40%), Positives = 193/329 (58%), Gaps = 2/329 (0%)
Query: 10 YWKPLGGGRVRCELCPLRCIIDEGKRGSCKIRINKGGKLYTLNYGKVSSIALDPIEKKPL 69
+W L R++C++CP C + EG+RG C +R ++ +YG+ S +DPIEKKPL
Sbjct: 11 HWHRLHDSRIQCDVCPRACKLHEGQRGLCFVRGRFDDQVKLTSYGRSSGFCVDPIEKKPL 70
Query: 70 FHFWPGSCAFSIGTVGCNMHCKHCQNWEISQADENFPYLQDATPEAIVRLAKHYECESIA 129
HF PGS S GT GCN+ CK CQNW+IS++ E A P I R A C S+A
Sbjct: 71 NHFLPGSATLSFGTAGCNLACKFCQNWDISKSREIDVLASRAAPADIARTAHELGCRSVA 130
Query: 130 YTYNEPTIWYEFVLDTAKLAKKEGLNNILVTNGYINEEPFRELAPYIDAMNIDIKAFDDR 189
+TYN+PTI++E+ D A +G+ + VT GY+ EP E +DA N+D+KAF +
Sbjct: 131 FTYNDPTIFWEYAADVADACHDQGIKAVAVTAGYMCPEPRAEFYRRVDAANVDLKAFTED 190
Query: 190 FYMKIASVPNGEPSRRIAKIAKKEFGIHVELTYLIIPTLNDKEEEIRAFARWVVDELGSD 249
FY K+ +A + + + + +E+T L+IP ND + E+ A RW+ + LG D
Sbjct: 191 FYRKVCVSHLRNVLDTLAYL-RHQTNVWLEITTLLIPGRNDSDAEVAAECRWIRENLGVD 249
Query: 250 TPVHFSRFFPHYKLLNLPPTPIETLEKAYKIAKEEGLKFVYLGNVPGHEGENTYCPRCGR 309
PVHF+ F P YK+++ P TP TL +A +I EGL+FVY GNV G +T CP C
Sbjct: 250 VPVHFTAFHPDYKMMDTPATPTATLTRAREIGIGEGLRFVYTGNVHDAVGGSTSCPGCRA 309
Query: 310 LLIERWGFEVLKYNI-EDGKCKYCGEKIP 337
+I R + + Y + EDG+C+ CG ++P
Sbjct: 310 TVIVRDWYSIRHYALTEDGRCQACGYQMP 338
>gi|11499859 pyruvate formate-lyase activating enzyme (act-4) [Archaeoglobus
fulgidus] >gi|7429688|pir||F69534 pyruvate formate-lyase
activating enzyme (act-4) homolog - Archaeoglobus
fulgidus >gi|2648242|gb|AAB88976.1| (AE000947) pyruvate
formate-lyase activating enzyme (act-4) [Archaeoglobus
fulgidus]
Length = 330
Score = 257 bits (649), Expect = 2e-67
Identities = 137/322 (42%), Positives = 192/322 (59%), Gaps = 7/322 (2%)
Query: 16 GGRVRCELCPLRCIIDEGKRGSCKIRINKGGKLYTLNYGKVSSIALDPIEKKPLFHFWPG 75
G +V C+LC C + +G+ G C++R N+GGK++T YGK+S + PIE KP FHF PG
Sbjct: 10 GDKVVCQLCWRFCKLGDGEEGHCRVRRNEGGKIFTTTYGKLSHLESRPIEIKPFFHFLPG 69
Query: 76 SCAFSIGTVGCNMHCKHCQNWEISQADENFPYLQDATPEAIVRLAKHYECESIAYTYNEP 135
S + + T CN C CQNW IS+A L++ +PE +V LA +S + NEP
Sbjct: 70 STSMTFSTYSCNFDCPWCQNWSISKATPP-EALRETSPEEVVDLALIMGDKSTCASLNEP 128
Query: 136 TIWYEFVLDTAKLAKKEGLNNILVTNGYINEEPFRELA-PYIDAMNIDIKAFDDRFYMKI 194
T+ YE++LD +LA+++GL N +V+NGY++ + L +DA+NID+K D+R Y
Sbjct: 129 TLLYEYLLDVFRLAREKGLKNTMVSNGYMSILALKNLKNAGLDAINIDVKG-DERVYRDY 187
Query: 195 ASVPNGEPSRRIAKIAKKEFGIHVELTYLIIPTLNDKEEEIRAFARWVVDELGSDTPVHF 254
+ R I K K GIHVE+ L++ + D EE +R R + GS P+HF
Sbjct: 188 CNAEVEYVWRVIEKATK--LGIHVEVVCLLVSNVVD-EEVVREIVREHLRRAGSSIPIHF 244
Query: 255 SRFFPHYKLLNLPPTPIETLEKAYKIAKEEGLKFVYLGNVPGHEGENTYCPRCGRLLIER 314
+R+FP Y+ PPT IE LE A K A +EG +F Y+GNVPGH ENT+CP CG LLI R
Sbjct: 245 TRYFPAYR-FTAPPTRIEFLEWAVKHAYKEGAEFAYIGNVPGHRFENTHCPDCGELLIRR 303
Query: 315 WGFEVLKYNIEDGKCKYCGEKI 336
+ F + I G C CG +I
Sbjct: 304 YSFSTVDNRIRSGCCPKCGREI 325
>pir||B71052 hypothetical protein PH1113 - Pyrococcus horikoshii
>gi|3257529|dbj|BAA30212.1| (AP000005) 337aa long
hypothetical protein [Pyrococcus horikoshii]
Length = 337
Score = 80.8 bits (196), Expect = 2e-14
Identities = 70/283 (24%), Positives = 130/283 (45%), Gaps = 34/283 (12%)
Query: 20 RCELCPLRCIIDEGKR-GSCKIRINKGGKLYTLNYGKVSSIALDPIEKKPLFHFWPGSCA 78
RC LC ++C ++ K G C+++ + + L+YG+ + +
Sbjct: 79 RCTLCEIKCRVNRKKSPGYCRVKESLVASDF-LHYGEEPELVP----------------S 121
Query: 79 FSIGTVGCNMHCKHCQNWEISQADENFPYLQDATPEAI-VRLAKHYE--CESIAYTYNEP 135
+++ GCN C CQNW+ISQ YL PE + +++ K ++ ++ + EP
Sbjct: 122 YTVFFSGCNFRCVFCQNWDISQFRIGVEYL----PEYMAIKIEKAFQLGARNVNFVGGEP 177
Query: 136 TIWYEFVLDTAKLAKKEGLNNILVTNGYINEEPFRELAPYIDAMNIDIKAFDDRFYMKIA 195
T F+L+T + + + + +N Y++EE + L +D D K +DR MK +
Sbjct: 178 TPNLPFILETLRYVRVP-IPIVWNSNMYMSEEAMKLLDGVVDIYLGDFKYGNDRCAMKYS 236
Query: 196 SVPN-GEPSRRIAKIAKKEFGIHVELTYLIIPTLNDKEEEIRAFARWVVDELGSDTPVH- 253
VP E R +AK+ F + +L++P N + + RW+ + LG + V+
Sbjct: 237 KVPRYWEVVTRNFLLAKEHFRAEFLIRHLVMP--NHLDCCTKPILRWIAENLGREIRVNV 294
Query: 254 FSRFFPHYKLLNLP----PTPIETLEKAYKIAKEEGLKFVYLG 292
++ P YK + ++ + +A KI K+ G K +G
Sbjct: 295 MFQYRPEYKAIEYDEIARTLTLDEMREAEKITKKLGFKNALVG 337
>pir||B75091 pyruvate formate-lyase activating enzyme (pflx) PAB0742 -
Pyrococcus abyssi (strain Orsay)
>gi|5458543|emb|CAB50031.1| (AJ248286) pyruvate
formate-lyase activating enzyme (pflX) [Pyrococcus
abyssi]
Length = 335
Score = 79.6 bits (193), Expect = 5e-14
Identities = 68/279 (24%), Positives = 124/279 (44%), Gaps = 28/279 (10%)
Query: 21 CELCPLRCIIDEGKR-GSCKIRINKGGKLYTLNYGKVSSIALDPIEKKPLFHFWPGSCAF 79
C LC ++C ++ + G C+++ + L+YG+ + ++
Sbjct: 78 CTLCEIKCRVNRKESVGYCRVKETLIASDF-LHYGEEPELVP----------------SY 120
Query: 80 SIGTVGCNMHCKHCQNWEISQADENFPYLQDATPEAIVRLAKHYECESIAYTYNEPTIWY 139
++ GCN C CQNW+ISQ Y + I R A + +++ + EPT
Sbjct: 121 TVFFSGCNFRCVFCQNWDISQFRVGLNYRPEYMALKIER-AYRFGAKNVNFVGGEPTPNL 179
Query: 140 EFVLDTAKLAKKEGLNNILVTNGYINEEPFRELAPYIDAMNIDIKAFDDRFYMKIASVPN 199
F+L+T + + + +N Y++E+ + L +D D K +DR +K + VP
Sbjct: 180 PFILETLRYVNVP-IPVVWNSNMYMSEDSMKLLDGIVDIYLGDFKYGNDRCALKYSKVPR 238
Query: 200 -GEPSRRIAKIAKKEFGIHVELTYLIIPTLNDKEEEIRAFARWVVDELGSDTPVH-FSRF 257
E R +AK F + +L++P N E R +W+ + LG D V+ ++
Sbjct: 239 YWEVVTRNFLLAKNHFRAEFLIRHLVMP--NHLECCTRPILKWISENLGKDVRVNVMFQY 296
Query: 258 FPHYKLLNLPPTP----IETLEKAYKIAKEEGLKFVYLG 292
P YK + +E +E+A ++ +E GLK +G
Sbjct: 297 RPEYKAMEYEEISRMLVLEEMEEAERLVREFGLKNALVG 335
>pir||F72279 conserved hypothetical protein - Thermotoga maritima (strain MSB8)
>gi|4981791|gb|AAD36312.1|AE001779_14 (AE001779)
conserved hypothetical protein [Thermotoga maritima]
Length = 355
Score = 73.7 bits (178), Expect = 3e-12
Identities = 76/307 (24%), Positives = 124/307 (39%), Gaps = 47/307 (15%)
Query: 21 CELCPLRCIIDEGKRGSCKIRINKGGKLYTLNYGKVSSIALDPIEKKPLFHFW----PGS 76
C LC C+I EGK G C + N+GG+L + +K H++ P +
Sbjct: 59 CFLCVNSCVIPEGKTGFCGVLRNEGGRLSYITGS----------HRKAFLHWYYDPHPTN 108
Query: 77 CA---------------FSIGTVGCNMHCKHCQN--WEISQADENFPYLQDATPEAIVRL 119
C F++ GCN+ C CQN + D + + +V +
Sbjct: 109 CVALPICPEREHRGFYNFAVFFAGCNLDCLFCQNIDHKYMVKDGRISEGKIVDIDELVEI 168
Query: 120 AKHYECESIAYTYNEPTIWYEFVLDTA-KLAKKEGLNNILVTNGYINEEPFRELAPYI-- 176
A + + +PT W F L+ A KL + + TNG + +A
Sbjct: 169 AMKPRVSCVCFFGGDPTPWTVFALEFAVKLGNRRRI--CWETNGLAHPRIMERMARVSLE 226
Query: 177 --DAMNIDIKAFDDRFYMKIASVPNGEPSRRIAK----IAKKEFGIHVEL---TYLIIPT 227
+ ID KAF Y + V RRI + ++ G + L + L+IP
Sbjct: 227 SGGIVKIDWKAFSPEVYEALTGVDGKSAVRRIMENVQLVSSMGKGREIPLLVISVLVIPH 286
Query: 228 LNDKEEEIRAFARWVVDELGSDTPVHFSRFFPHYKLLNLPPTPIETLEKAYKIAKEEGLK 287
D E+EI A + + + + P+ F P + + +LP T +E+ + A E+GLK
Sbjct: 287 YID-EKEIEGIAGF-ISSVDPEIPLVLLAFAPQHLMSDLPTTRKHHMERVKQKALEKGLK 344
Query: 288 FVYLGNV 294
V++ NV
Sbjct: 345 RVFVENV 351
>pir||F69230 pyruvate formate-lyase activating enzyme related protein -
Methanobacterium thermoautotrophicum (strain Delta H)
>gi|2622075|gb|AAB85472.1| (AE000871) pyruvate
formate-lyase activating enzyme related protein
[Methanobacterium thermoautotrophicum]
Length = 304
Score = 71.0 bits (171), Expect = 2e-11
Identities = 70/291 (24%), Positives = 117/291 (40%), Gaps = 39/291 (13%)
Query: 20 RCELCPLRCIID--EGKRGSCKIRINKGGKLYTLNYGKVSSIALDPIEKKPLFHFWPGSC 77
RC LC RC + +G+RG C G + Y +S
Sbjct: 6 RCMLCEWRCGANRSDGERGVC------GASETEIAYTSISETLR---------------- 43
Query: 78 AFSIGTVGCNMHCKHCQNWEISQADEN------FPYLQDATPEAIVRLAKHYECESIAYT 131
++S+ + C C +C + ISQ + ++ EAI + H +I++T
Sbjct: 44 SYSVTFLCCPFRCAYCNAYRISQYPHSGWIYRGHVEAEELADEAITAIKSHERISNISFT 103
Query: 132 YNEPTIWYEFVLDTAKLAKKE-GLNNILVTNGYINEEPFRELAPYIDAMNIDIKAFDDRF 190
EP+I ++ + + ++E ++ IL TNG+ R L + +IKA D
Sbjct: 104 GGEPSIHTPYIEELVRRVREEIDVSVILATNGFSTPGTLRRLIGLTSLFSFEIKALSDEL 163
Query: 191 YMKIASVPNGEPSRRIAKIAKKEFGIHVEL-TYLIIPTLNDKE-EEIRAFARWVVDELGS 248
+ + P EP R A F + + ++IP +ND E EI AF + +
Sbjct: 164 HRNLTGAP-AEPVLRNAAHLAGRFPDKIRVFRTVVIPGINDHEIREIAAF----IASIDP 218
Query: 249 DTPVHFSRFFPHYKLLNLPPTPIETLEKAYKIAKEEGLKFV-YLGNVPGHE 298
+ P F P++ L E +E+ + + EGL+ V Y G P E
Sbjct: 219 EIPYRLIGFRPNFMLYYHRGPGRELMERLVEECRAEGLERVDYSGYYPASE 269
>gi|11497737 pyruvate formate-lyase activating enzyme (act-1) [Archaeoglobus
fulgidus] >gi|7483930|pir||E69264 pyruvate formate-lyase
activating enzyme (act-1) homolog - Archaeoglobus
fulgidus >gi|2650528|gb|AAB91111.1| (AE001098) pyruvate
formate-lyase activating enzyme (act-1) [Archaeoglobus
fulgidus]
Length = 320
Score = 70.2 bits (169), Expect = 3e-11
Identities = 55/216 (25%), Positives = 97/216 (44%), Gaps = 14/216 (6%)
Query: 85 GCNMHCKHCQNWEISQADENFPYLQDATPEAIVRLAKHYECESIAYTYNEPTIWYEFVLD 144
GCN C +CQNW + F ++ + + ++R AK++ + + P F L
Sbjct: 108 GCNFDCLYCQNW----THKYFEDVRTVSVDELLRAAKNFRVRCVCHFGGSPEPQLPFALK 163
Query: 145 TAKLAK--KEGLNNILVTNGYINEEPFRELAPYID----AMNIDIKAFDDRFYMKIASVP 198
++ A KE L NG N + A + D+KA++ ++ +
Sbjct: 164 FSRKALEFKEDLMICWEWNGAGNTSLALKAAELSSRSGGTVKFDLKAWNPNLHVLLTGRD 223
Query: 199 NGEPSRRIAKIAKKEFGIHVELTYLIIPTLNDKEEEIRAFARWVVDELGSDTPVHFSRFF 258
N +I K G + T L++P D EEE+ AR++ ++ P F
Sbjct: 224 NERVKDNFERIYDKH-GEVLSATTLLVPYYVD-EEEVEGIARFI-SSFSTEIPYSLLVFH 280
Query: 259 PHYKLLNLPPTPIETLEKAYKIAKEEGLKFVYLGNV 294
P Y++ + P TP++ +++ YK AK+ LK V +GN+
Sbjct: 281 PDYRMSDFPVTPVQQVKRCYKAAKKH-LKNVNIGNL 315
>pir||F64503 hypothetical protein MJ1632 - Methanococcus jannaschii
>gi|1592222|gb|AAB99653.1| (U67603) coenzyme PQQ
synthesis protein (pqqE) [Methanococcus jannaschii]
Length = 255
Score = 69.9 bits (168), Expect = 5e-11
Identities = 60/214 (28%), Positives = 103/214 (48%), Gaps = 19/214 (8%)
Query: 83 TVGCNMHCKHCQNWEISQADENFPYLQDATPEAIVRLAKHYECESIAYTYNEPTIWYEFV 142
T GCN CK+C +S Y D I+ + ++Y+ + I EPT+ + +
Sbjct: 42 TYGCNFKCKYCFFKPLSCKK----YSVDEILNKILEVNENYKLDKILIAGGEPTLQND-L 96
Query: 143 LDTAKLAKKEGLNNILVTNGYINEEPFRELAPYIDAMNIDIKAFDDRFYMKIASVPNGEP 202
+ KL K EG +L TNGY ++ +L +D ++ID+KA+D+ ++ + S N +
Sbjct: 97 SELTKLLKDEGFYLMLSTNGYYLKDMLDKLE--VDEIHIDLKAYDENKHIYLTSCSNKKV 154
Query: 203 SRRIAKIAK--KEFGIHVELTYLIIPTLNDKEEEIRAFARWVVDELGSDTPVHFSRFFPH 260
I+ I K EF VE+ ++IP + D +EI A+++ + D P + + +
Sbjct: 155 LDCISYIGKYRDEFNFKVEIDTVLIPNIVDL-DEIEKIAKFLSN---WDLPYRITGYVKY 210
Query: 261 YKLLNLPPTPIETLEKAYKIAKEEGLKFVYLGNV 294
LN + + KA +IA + YL NV
Sbjct: 211 NNNLNAEKPDEDKILKAKEIALK------YLSNV 238
>gb|AAB88388.1| (AF034788) hypothetical protein [Methanococcus maripaludis]
Length = 151
Score = 69.9 bits (168), Expect = 5e-11
Identities = 38/122 (31%), Positives = 58/122 (47%), Gaps = 1/122 (0%)
Query: 19 VRCELCPLRCIIDEGKRGSCKIRINKGGKLYTLNYGKVSSIALDPIEKKPLFHFWPGSCA 78
++C +C + C I EG G C + N+ KL ++ IE P+ HF P +
Sbjct: 4 MKCTVCEIGCDISEGNYGRCNMYTNQNSKLIERFPNSYLTVLPITIETMPMVHFAPKNKF 63
Query: 79 FSIGTVGCNMHCKHCQNWEI-SQADENFPYLQDATPEAIVRLAKHYECESIAYTYNEPTI 137
+ TVGCN +C+ C + + S AD L A+P I+ AK EC I + N+
Sbjct: 64 LQVSTVGCNFNCQGCISETLTSNADALSGALTKASPSDIISRAKTEECSGIVFCLNDQYS 123
Query: 138 WY 139
+Y
Sbjct: 124 YY 125
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.322 0.142 0.456
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 148560700
Number of Sequences: 2977
Number of extensions: 6717633
Number of successful extensions: 13708
Number of sequences better than 1.0e-10: 20
Number of HSP's better than 0.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 13645
Number of HSP's gapped (non-prelim): 21
length of query: 352
length of database: 189,106,746
effective HSP length: 49
effective length of query: 303
effective length of database: 159,780,883
effective search space: 48413607549
effective search space used: 48413607549
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.8 bits)
S2: 166 (69.1 bits)