BLASTP 2.0.10 [Aug-26-1999]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= PAB1874 (dppD-2) DE:PEPTIDE ABC TRANSPORTER ATP-BINDING PROTEIN
         (329 letters)

Database: ./suso.pep; /banques/blast2/nr.pep
           598,487 sequences; 189,106,746 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

pir||H75117 peptide abc transporter ATP-binding protein PAB1874 ...   663  0.0
pir||F71014 probable dipeptide transport ATP-binding protein dpp...   637  0.0
pir||F72617 probable dipeptide transport system ATP-binding prot...   464  e-130
pir||F75202 dipeptide abc transporter, dipeptide-binding protein...   363  2e-99
pir||C72300 oligopeptide ABC transporter, ATP-binding protein - ...   350  2e-95
pir||A72371 oligopeptide ABC transporter, ATP-binding protein - ...   334  7e-91
dbj|BAB03747.1| (AP001507) oligopeptide ABC transporter (ATP-bin...   329  3e-89
pir||H75380 peptide ABC transporter, ATP-binding protein - Deino...   326  3e-88
pir||C72424 oligopeptide ABC transporter, ATP-binding protein - ...   323  2e-87
pir||D72371 oligopeptide ABC transporter, ATP-binding protein - ...   322  3e-87
sp|Q53193|Y4TR_RHISN PROBABLE PEPTIDE ABC TRANSPORTER ATP-BINDIN...   317  1e-85
gb|AAF73093.1|AF103793_4 (AF103793) ATPase OppD [Listeria monocy...   312  4e-84
gb|AAG22037.1|AF305387_4 (AF305387) OppD [Bacillus thuringiensis]     311  6e-84
pir||A72452 probable peptide transport ATP-binding protein APE22...   309  3e-83
dbj|BAB04069.1| (AP001508) oligopeptide ABC transporter (ATP-bin...   307  1e-82
sp|P26905|DPPD_BACSU DIPEPTIDE TRANSPORT ATP-BINDING PROTEIN DPP...   307  1e-82
pir||H72215 oligopeptide ABC transporter, ATP-binding protein - ...   303  1e-81
emb|CAC05750.1| (AL391751) putative peptide transport system ATP...   302  3e-81
sp|P24136|OPPD_BACSU OLIGOPEPTIDE TRANSPORT ATP-BINDING PROTEIN ...   300  1e-80
pir||D38447 sporulation initiation protein spo0KD - Bacillus sub...   300  1e-80
gb|AAA62691.1| (M57689) sporulation protein [Bacillus subtilis]       300  1e-80
gb|AAC64255.1| (AF042861) putative OppD [Treponema denticola]         300  1e-80
pir||G71211 probable oligopeptide transport ATP-binding protein ...   300  2e-80
dbj|BAB07365.1| (AP001519) oligopeptide ABC transporter (ATP-bin...   299  3e-80
pir||G75026 oligopeptide transport ATP-binding protein appd. PAB...   299  3e-80
sp|P42064|APPD_BACSU OLIGOPEPTIDE TRANSPORT ATP-BINDING PROTEIN ...   298  8e-80
pir||D72720 probable oligopeptide transport ATP-binding protein ...   293  2e-78
sp|P37314|DPPD_ECOLI DIPEPTIDE TRANSPORT ATP-BINDING PROTEIN DPP...   293  2e-78
gi|11499359 dipeptide ABC transporter, ATP-binding protein (dppD...   287  1e-76
pir||T34759 oligopeptide ABC transporter ATP-binding protein - S...   287  1e-76
dbj|BAB07359.1| (AP001519) oligopeptide ABC transporter (ATP-bin...   287  1e-76
pir||T45280 probable ABC transporter intracellular ATPase chain ...   286  3e-76
gb|AAG20449.1| (AE005117) oligopeptide ABC transporter; OppD2 [H...   283  2e-75
sp|P45095|DPPD_HAEIN DIPEPTIDE TRANSPORT ATP-BINDING PROTEIN DPP...   283  2e-75
pir||E72536 probable oligopeptide transport ATP-binding protein ...   281  9e-75
pir||D72289 oligopeptide ABC transporter, ATP-binding protein - ...   280  1e-74
pir||E82242 oligopeptide ABC transporter, ATP-binding protein VC...   269  3e-71
dbj|BAA14778.1| (D90763) Oligopeptide transport ATP-binding prot...   268  5e-71
sp|P76027|OPPD_ECOLI OLIGOPEPTIDE TRANSPORT ATP-BINDING PROTEIN ...   268  5e-71
dbj|BAB07364.1| (AP001519) oligopeptide ABC transporter (ATP-bin...   268  8e-71
sp|P04285|OPPD_SALTY OLIGOPEPTIDE TRANSPORT ATP-BINDING PROTEIN ...   266  2e-70
pir||E83082 probable ATP-binding component of ABC transporter PA...   265  5e-70
pir||G72283 oligopeptide ABC transporter, ATP-binding protein - ...   264  1e-69
pir||G71014 probable dipeptide transport ATP-binding protein dpp...   263  3e-69
gb|AAK42736.1| Dipeptide ABC transporter ATP binding protein (dp...   263  3e-69
pir||B72424 oligopeptide ABC transporter, ATP-binding protein - ...   262  5e-69
emb|CAA61525.1| (X89237) oligopeptidepermease [Streptococcus pyo...   261  6e-69
pir||B72421 oligopeptide ABC transporter, ATP-binding protein - ...   261  6e-69
sp|P18765|AMIE_STRPN OLIGOPEPTIDE TRANSPORT ATP-BINDING PROTEIN ...   260  1e-68
pir||QREBOT oligopeptide transport protein oppD - Salmonella typ...   260  1e-68
sp|P45052|OPPD_HAEIN OLIGOPEPTIDE TRANSPORT ATP-BINDING PROTEIN ...   259  4e-68
pir||B72300 oligopeptide ABC transporter, ATP-binding protein - ...   257  2e-67
sp|Q11040|YC81_MYCTU HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR...   256  2e-67
dbj|BAA94702.1| (AB026907) dipeptide transporter DppD homolog [O...   256  3e-67
pir||C72289 oligopeptide ABC transporter, ATP-binding protein - ...   255  6e-67
sp|P42065|APPF_BACSU OLIGOPEPTIDE TRANSPORT ATP-BINDING PROTEIN ...   254  1e-66
pir||H72366 oligopeptide ABC transporter, ATP-binding protein - ...   254  1e-66
pir||F72049 peptide ABC transporter, ATP-binding protein CP0065 ...   253  2e-66
gb|AAK41513.1| Oligo/dipeptide transport, ATP binding protein (d...   252  4e-66
pir||G75117 dipeptide abc transporter, ATP-binding protein (dppf...   252  5e-66
gb|AAC24218.1| (AF055482) ABC transporter [Thermotoga neapolitana]    249  4e-65
dbj|BAB03746.1| (AP001507) oligopeptide ABC transporter (ATP-bin...   249  4e-65
pir||E82301 peptide ABC transporter, ATP-binding protein VC0617 ...   249  5e-65
pir||A72216 oligopeptide ABC transporter, ATP-binding protein - ...   247  2e-64
pir||H71951 dipeptide transport system dipeptide transport syste...   246  2e-64
pir||T34760 oligopeptide ABC transporter ATP-binding protein - S...   246  3e-64
pir||F72428 oligopeptide ABC transporter, ATP-binding protein - ...   245  4e-64
emb|CAC11410.1| (AL445063) probable sporulation protein (spo0KD)...   245  4e-64
pir||E64557 dipeptide transport ATP-binding protein dppD - Helic...   245  5e-64
pir||F71483 probable dipeptide transport - Chlamydia trachomatis...   243  2e-63
gb|AAK43155.1| Maltose ABC transporter, ATP-binding protein [Sul...   243  2e-63
pir||D71163 probable oligopeptide transport ATP-binding protein ...   241  8e-63
dbj|BAA35517.1| (D90720) Hypothetical ABC transporter ATP-bindin...   240  1e-62
sp|P75796|YLIA_ECOLI HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR...   240  1e-62
pir||E64820 probable oligopeptide transport protein - Escherichi...   240  2e-62
pir||E70141 oligopeptide transport ATP-binding protein oppD - Ly...   239  3e-62
dbj|BAB04070.1| (AP001508) oligopeptide ABC transporter (ATP-bin...   239  3e-62
pir||E71130 probable oligopeptide transport ATP-binding protein ...   239  4e-62
pir||JC5009 nucleotide-binding protein D - Methanosarcina mazei ...   238  5e-62
emb|CAC16446.1| (AL450165) putative oligopeptide ABC transporter...   238  5e-62
pir||F71211 probable oligopeptide transport ATP-binding protein ...   238  9e-62
pir||G75202 dipeptide abc transporter, dipeptide-binding protein...   236  2e-61
sp|Q07733|OPPD_LACLA OLIGOPEPTIDE TRANSPORT ATP-BINDING PROTEIN ...   236  3e-61
sp|P50980|OPPD_LACLC OLIGOPEPTIDE TRANSPORT ATP-BINDING PROTEIN ...   236  3e-61
pir||C81746 peptide ABC transporter, ATP-binding protein TC0062 ...   236  3e-61
pir||F75026 oligopeptide transport ATP-binding protein appf. PAB...   235  6e-61
gb|AAG22038.1|AF305387_5 (AF305387) OppF [Bacillus thuringiensis]     235  8e-61
gb|AAG10493.1|AF279106_55 (AF279106) predicted ABC transporter A...   231  7e-60
pir||C72371 oligopeptide ABC transporter, ATP-binding protein - ...   231  7e-60
sp|P77268|YDDP_ECOLI HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR...   231  9e-60
pir||B82393 ABC transporter, ATP-binding protein VCA0977 [import...   231  1e-59
emb|CAA39791.1| (X56347) OppF [Bacillus subtilis]                     230  1e-59
pir||D72393 oligopeptide ABC transporter, ATP-binding protein - ...   230  1e-59
pir||H82355 peptide ABC transporter, ATP-binding protein VC0170 ...   230  2e-59
gb|AAG20587.1| (AE005129) dipeptide ABC transporter ATP-binding;...   230  2e-59
pir||A72618 probable oligopeptide transport ATP-binding protein ...   229  3e-59
sp|P24137|OPPF_BACSU OLIGOPEPTIDE TRANSPORT ATP-BINDING PROTEIN ...   229  3e-59
sp|Q53194|Y4TS_RHISN PROBABLE PEPTIDE ABC TRANSPORTER ATP-BINDIN...   229  4e-59
pir||G75380 peptide ABC transporter, ATP-binding protein - Deino...   229  4e-59
gb|AAG20460.1| (AE005118) oligopeptide ABC transporter ATP-bindi...   229  4e-59
gi|10955092 moaD [Agrobacterium tumefaciens] >gi|11278927|pir||T...   228  6e-59
pir||C72452 probable peptide transport ATP-binding protein APE22...   228  1e-58
gb|AAA62693.1| (M57689) sporulation protein [Bacillus subtilis] ...   227  2e-58
pir||D83419 probable ATP-binding component of ABC transporter PA...   226  2e-58
gi|11499360 dipeptide ABC transporter, ATP-binding protein (dppF...   225  5e-58
pir||F83082 probable ATP-binding component of ABC dipeptide tran...   224  1e-57
emb|CAC05751.1| (AL391751) putative peptide transport system ATP...   224  1e-57
emb|CAC11415.1| (AL445063) sporulation protein (spo0KD) related ...   224  1e-57
sp|P47325|OPPD_MYCGE OLIGOPEPTIDE TRANSPORT ATP-BINDING PROTEIN ...   223  3e-57
gb|AAG09260.1| (AF176664) EppD [EDTA-degrading bacterium BNC1]        222  3e-57
pir||C75142 oligopeptide transport ATP-binding protein appf PAB0...   222  4e-57
pir||F75068 dipeptide abc transporter, ATP-binding protein (dppd...   222  4e-57
gb|AAC64256.1| (AF042861) putative OppF [Treponema denticola]         220  2e-56
gi|10955083 agaD [Agrobacterium tumefaciens] >gi|11346288|pir||T...   219  3e-56
gb|AAG20461.1| (AE005118) oligopeptide ABC transporter ATP-bindi...   219  5e-56
sp|P37313|DPPF_ECOLI DIPEPTIDE TRANSPORT ATP-BINDING PROTEIN DPP...   218  6e-56
sp|P45094|DPPF_HAEIN DIPEPTIDE TRANSPORT ATP-BINDING PROTEIN DPP...   217  1e-55
sp|P45051|OPPF_HAEIN OLIGOPEPTIDE TRANSPORT ATP-BINDING PROTEIN ...   217  2e-55
sp|P77737|OPPF_ECOLI OLIGOPEPTIDE TRANSPORT ATP-BINDING PROTEIN ...   216  2e-55
sp|P08007|OPPF_SALTY OLIGOPEPTIDE TRANSPORT ATP-BINDING PROTEIN ...   215  4e-55
sp|P36636|SAPD_SALTY PEPTIDE TRANSPORT SYSTEM ATP-BINDING PROTEI...   215  4e-55
pir||F71130 probable oligopeptide transport ATP-binding protein ...   215  4e-55
gb|AAA23706.1| (L08399) peripheral membrane protein [Escherichia...   215  6e-55
pir||F82242 oligopeptide ABC transporter, ATP-binding protein VC...   214  1e-54
pir||C82442 probable peptide ABC transporter, ATP-binding protei...   214  1e-54
pir||C72536 probable oligopeptide transport ATP-binding protein ...   213  2e-54
pir||B69856 oligopeptide transport ATP-binding protein homolog y...   213  2e-54
dbj|BAA97046.1| (AB015765) TrkE [Vibrio alginolyticus]                213  3e-54
emb|CAA10912.1| (AJ222649) sapD [Erwinia chrysanthemi]                212  6e-54
sp|P75552|OPPD_MYCPN OLIGOPEPTIDE TRANSPORT ATP-BINDING PROTEIN ...   210  1e-53
sp|P36635|SAPD_ECOLI PEPTIDE TRANSPORT SYSTEM ATP-BINDING PROTEI...   210  2e-53
gb|AAK42735.1| Dipeptide ABC transporter ATP binding protein (dp...   210  2e-53
gb|AAF28110.1|AF153317_2 (AF153317) SapD [Shigella dysenteriae]       208  6e-53
gb|AAK43146.1| ABC transporter, ATP binding protein [Sulfolobus ...   208  7e-53
pir||T03431 probable transport protein accB - Agrobacterium tume...   207  2e-52
pir||S75333 oligopeptide transport protein oppF - Synechocystis ...   206  2e-52
pir||H70788 probable peptidetransport system ABC-transporter ATP...   205  8e-52
gi|10954941 Probable accB [Agrobacterium tumefaciens] >gi|649829...   205  8e-52
gb|AAK42789.1| ABC transporter, ATP binding protein [Sulfolobus ...   204  1e-51
pir||B72282 oligopeptide ABC transporter, ATP-binding protein - ...   204  1e-51
pir||E82170 peptide ABC transporter, ATP-binding protein VC1683 ...   204  1e-51
gb|AAA50595.1| (U08186) ATP-dependent oligopeptide transport pro...   203  2e-51
emb|CAA68076.1| (X99740) oligopeptide transport ATP-binding prot...   203  3e-51
gb|AAK41514.1| Oligo/dipeptide transport, ATP binding protein (d...   202  5e-51
gb|AAK41519.1| Oligo/dipeptide transport, ATP binding protein . ...   201  7e-51
dbj|BAA94703.1| (AB026907) dipeptide transporter DppE homolog [O...   201  1e-50
dbj|BAB04289.1| (AP001509) oligopeptide ABC transporter (ATP-bin...   200  2e-50
sp|P33916|YEJF_ECOLI HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR...   199  3e-50
dbj|BAA15988.1| (D90849) Oligopeptide transport ATP-binding prot...   199  3e-50
pir||D75142 oligopeptide transport ATP-binding protein appf PAB0...   198  8e-50
pir||D82301 peptide ABC transporter, ATP-binding protein VC0616 ...   197  2e-49
gb|AAF73094.1|AF103793_5 (AF103793) ATPase OppF [Listeria monocy...   195  5e-49
pir||F71163 probable oligopeptide transport ATP-binding protein ...   192  4e-48
pir||T35983 probable peptide transport ATP-binding protein - Str...   192  4e-48
pir||B83389 probable ATP-binding component of ABC transporter PA...   192  6e-48
gb|AAG20448.1| (AE005117) oligopeptide ABC transporter ATP-bindi...   191  1e-47
sp|P45288|SAPD_HAEIN PEPTIDE TRANSPORT SYSTEM ATP-BINDING PROTEI...   189  4e-47
pir||F70141 probable oligopeptide transport ATP-binding protein ...   187  2e-46
pir||E71545 probable oligopeptide transport ATPase - Chlamydia t...   187  2e-46
emb|CAC11411.1| (AL445063) oligopeptide transport ATP-binding pr...   187  2e-46
emb|CAC12446.1| (AL445067) probable oligopeptide ABC transport s...   186  3e-46
sp|P18766|AMIF_STRPN OLIGOPEPTIDE TRANSPORT ATP-BINDING PROTEIN ...   185  5e-46
emb|CAA61526.1| (X89237) oligopeptidepermease [Streptococcus pyo...   185  5e-46
gb|AAG32327.1| (AF305548) oligopeptide permease [Streptococcus p...   185  5e-46
pir||E75068 dipeptide abc transporter, ATP-binding protein (dppf...   183  2e-45
pir||T35941 probable ABC-type transport systsem ATP-binding prot...   178  6e-44
pir||C72421 oligopeptide ABC transporter, ATP-binding protein - ...   177  1e-43
gi|10954710 hypothetical ABC-transporter gene~similar to moaD ge...   176  4e-43
pir||A70482 ABC transporter - Aquifex aeolicus >gi|2984331|gb|AA...   169  3e-41
pir||B64551 oligopeptide ABC transporter, ATP-binding protein - ...   166  3e-40
pir||E71957 ABC transporter, ATP-binding protein - Helicobacter ...   165  8e-40
pir||E72393 oligopeptide ABC transporter, ATP-binding protein - ...   164  1e-39
pir||A72284 oligopeptide ABC transporter, ATP-binding protein - ...   163  3e-39
gb|AAK42790.1| ABC transporter, ATP binding protein [Sulfolobus ...   152  6e-36
pir||G72049 peptide ABC transporter, ATP-binding protein CP0064 ...   148  1e-34
gb|AAF77616.1|AF151721_2 (AF151721) oligopeptide permease subuni...   146  2e-34
pir||S56325 hisP protein-like nucleotide-binding protein phnK - ...   141  8e-33
sp|P16678|PHNK_ECOLI PHOSPHONATES TRANSPORT ATP-BINDING PROTEIN ...   141  1e-32
sp|P36637|SAPF_ECOLI PEPTIDE TRANSPORT SYSTEM ATP-BINDING PROTEI...   129  6e-29
sp|P36638|SAPF_SALTY PEPTIDE TRANSPORT SYSTEM ATP-BINDING PROTEI...   126  4e-28
gi|11498955 phosphate ABC transporter, ATP-binding protein (pstB...   121  1e-26
pir||H72275 phosphate ABC transporter, ATP-binding protein - The...   119  5e-26
gb|AAG18995.1| (AE004999) phosphate transport ATP-binding; PstB2...   117  2e-25
emb|CAA10913.1| (AJ222649) sapF [Erwinia chrysanthemi]                115  6e-25
emb|CAC00366.1| (AL160371) probable oligopeptide transport ATP-b...   114  2e-24
dbj|BAB07815.1| (AB036417) CysA protein [Acetabularia acetabulum]     110  2e-23
sp|P31134|POTG_ECOLI PUTRESCINE TRANSPORT ATP-BINDING PROTEIN PO...   109  6e-23
pir||B70127 phosphate ABC transporter, ATP-binding protein (pstB...   108  8e-23
pir||C75369 amino acid ABC transporter, ATP-binding protein - De...   108  1e-22
gb|AAK41516.1| Oligo/dipeptide transport, ATP binding protein . ...   106  5e-22
pir||A82184 ABC transporter, ATP-binding protein VC1568 [importe...   103  3e-21
pir||H82377 ABC transporter, ATP-binding protein VCA1101 [import...   103  3e-21
gb|AAC05643.1| (AF033673) unknown [Pseudomonas marginalis pv. al...   101  1e-20
pir||T47012 hypothetical protein [imported] - Yersinia pestis >g...   101  2e-20
gb|AAF64239.1|AF249736_3 (AF249736) ABC transporter [Pseudomonas...   100  3e-20
emb|CAC11998.1| (AL445065) ABC transporter related protein [Ther...   100  4e-20
pir||T34822 ABC-transporter ATP binding protein - Streptomyces c...    99  6e-20
gi|10955070 agtA [Agrobacterium tumefaciens] >gi|6689864|gb|AAF2...    99  6e-20
gb|AAF43494.1|AF130119_1 (AF130119) oligopeptide permease D [Myc...    98  2e-19
pir||A82932 ABC Transporter UU118 [imported] - Ureaplasma urealy...    97  2e-19
pir||G83245 probable ATP-binding component of ABC transporter PA...    95  1e-18
pir||S75652 ABC-type transport protein sll1878 - Synechocystis s...    95  1e-18
pir||T10888 iron utilization protein C - Haemophilus influenzae ...    94  2e-18
sp|P44513|HITC_HAEIN IRON(III)-TRANSPORT ATP-BINDING PROTEIN HIT...    94  3e-18
pir||A64455 methyl coenzyme M reductase (EC 1.8.-.-) component A...    94  3e-18
gb|AAC21775.1| (U32695) iron(III) ABC transporter, ATP-binding p...    93  4e-18
emb|CAC10293.1| (AL442629) putative ABC transport system ATP bin...    93  5e-18
gb|AAC24216.1| (AF055482) ABC transporter [Thermotoga neapolitana]     92  6e-18
pir||B82185 glycerol-3-phosphate ABC transporter, ATP-binding pr...    88  1e-16
sp|P15361|P29_MYCHR PROBABLE ABC TRANSPORTER ATP-BINDING PROTEIN...    87  2e-16
pir||T35450 ABC transporter ATP binding protein - Streptomyces c...    87  2e-16
emb|CAB61861.1| (AL133252) putative ABC-transporter ATP binding ...    87  2e-16
gb|AAA16186.1| (L07065) P-glycoprotein/multidrug resistance prot...    87  3e-16
pir||A47377 multidrug resistance protein Mdr50 - fruit fly (Dros...    87  3e-16
gi|10955064 motB [Agrobacterium tumefaciens] >gi|3064078|gb|AAC1...    87  4e-16
gb|AAD53162.1|AF176824_5 (AF176824) ATP-binding protein of ABC t...    87  4e-16
gb|AAB51510.1| (U91632) sugar transporter [Agrobacterium tumefac...    86  6e-16
gb|AAD02045.1| (AF035964) ATP-binding protein B [Brucella abortus]     85  8e-16
gb|AAF58271.1| (AE003815) Mdr50 gene product [Drosophila melanog...    84  2e-15
pir||E72314 ribose ABC transporter, ATP-binding protein - Thermo...    83  3e-15
pir||H83346 probable ATP-binding/permease fusion ABC transporter...    83  4e-15
pir||T36431 probable ABC-type transport system ATP-binding prote...    83  5e-15
pir||T26313 hypothetical protein W09D6.6 - Caenorhabditis elegan...    82  7e-15
pir||T18939 hypothetical protein C05A9.1 - Caenorhabditis elegan...    82  9e-15
pir||S74440 iron(III) dicitrate transport system permease protei...    81  2e-14
dbj|BAB07160.1| (AP001518) L-arabinose ABC transporter (ATP-bind...    80  3e-14
sp|P55453|Y4FO_RHISN PUTATIVE ABC TRANSPORTER ATP-BINDING PROTEI...    79  6e-14
pir||T21267 hypothetical protein F22E10.2 - Caenorhabditis elega...    79  6e-14
pir||G75142 abc transporter, ATP-binding protein PAB2147 - Pyroc...    78  1e-13
pir||G81022 ABC transporter, ATP-binding protein NMB1966 [import...    78  1e-13
dbj|BAA75396.1| (AB013378) YhaQ [Bacillus halodurans]                  78  2e-13
pir||T10656 probable ABC-type transport protein T5F17.70 - Arabi...    78  2e-13
pir||T22094 hypothetical protein ZK455.7 - Caenorhabditis elegan...    77  2e-13
pir||S72783 probable ABC-type transport protein B1496_F3_97 - My...    77  3e-13
gb|AAD02044.1| (AF035964) ATP-binding protein A [Brucella abortus]     77  3e-13
pir||B81966 probable ABC transport ATP-binding protein NMA0485 [...    76  4e-13
dbj|BAB06054.1| (AP001515) ABC transporter (ATP-binding protein)...    76  4e-13
pir||T10657 probable ABC-type transport protein T5F17.80 - Arabi...    76  5e-13
gb|AAG09827.1|AF287697_1 (AF287697) half-molecule ABC transporte...    76  5e-13
emb|CAC11370.1| (AL445063) gliding motility protein related [The...    76  5e-13
pir||S74597 ABC-type transport protein sll1041 - Synechocystis s...    75  9e-13
gb|AAD29087.1|AF082879_3 (AF082879) FepC [Yersinia enterocolitica]     75  2e-12
pir||S76856 hypothetical protein - Synechocystis sp. (strain PCC...    74  2e-12
gb|AAC71706.1| (AF061070) PtxA [Pseudomonas stutzeri]                  74  2e-12
pir||T21268 hypothetical protein F22E10.3 - Caenorhabditis elega...    73  4e-12
pir||T40790 probable permease - fission yeast (Schizosaccharomyc...    73  5e-12
pir||E70871 hypothetical protein Rv1458c - Mycobacterium tubercu...    72  8e-12
gb|AAD43625.1|AF071410_1 (AF071410) ATP-binding cassette multidr...    72  8e-12
pir||H82381 toxin secretion ATP-binding protein VCA1084 [importe...    72  8e-12
emb|CAB39282.1| (AJ133704) NatA protein [Anabaena sp.]                 71  1e-11
pir||S47673 leucine transport protein livF - Escherichia coli >g...    71  2e-11
sp|Q61102|ABC7_MOUSE ATP-BINDING CASSETTE, SUB-FAMILY B, MEMBER ...    71  2e-11
pir||F71732 ABC transporter ATP-binding protein (abcT3) RP214 - ...    71  2e-11
gi|6322640 ABC transporter, glycoprotein, component of a-factor ...    71  2e-11
prf||1512309A multidrug resistance P glycoprotein [Saccharomyces...    71  2e-11
pir||I39978 subtilin spaB - Bacillus subtilis >gi|143559|gb|AAA2...    69  7e-11
sp|P55469|Y4GM_RHISN PROBABLE ABC TRANSPORTER ATP-BINDING PROTEI...    69  9e-11

>pir||H75117 peptide abc transporter ATP-binding protein PAB1874 - Pyrococcus
           abyssi (strain Orsay) >gi|5458168|emb|CAB49657.1|
           (AJ248285) PEPTIDE ABC TRANSPORTER ATP-BINDING PROTEIN
           [Pyrococcus abyssi]
           Length = 329
           
 Score =  663 bits (1691), Expect = 0.0
 Identities = 329/329 (100%), Positives = 329/329 (100%)

Query: 1   MRKVPEPILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQ 60
           MRKVPEPILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQ
Sbjct: 1   MRKVPEPILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQ 60

Query: 61  LIESPGRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGY 120
           LIESPGRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGY
Sbjct: 61  LIESPGRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGY 120

Query: 121 QIAEAMEVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGIS 180
           QIAEAMEVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGIS
Sbjct: 121 QIAEAMEVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGIS 180

Query: 181 NNPRILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYA 240
           NNPRILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYA
Sbjct: 181 NNPRILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYA 240

Query: 241 GKIVEIGTVDQIFKNPLHPYTQGLLRAVPNPLTKIEKLEAIPGTVPNLITPPGGCRFHPR 300
           GKIVEIGTVDQIFKNPLHPYTQGLLRAVPNPLTKIEKLEAIPGTVPNLITPPGGCRFHPR
Sbjct: 241 GKIVEIGTVDQIFKNPLHPYTQGLLRAVPNPLTKIEKLEAIPGTVPNLITPPGGCRFHPR 300

Query: 301 CPKVMSICKEKVPELKEIEPGHFVACHLY 329
           CPKVMSICKEKVPELKEIEPGHFVACHLY
Sbjct: 301 CPKVMSICKEKVPELKEIEPGHFVACHLY 329


>pir||F71014 probable dipeptide transport ATP-binding protein dppD - Pyrococcus
           horikoshii >gi|3257835|dbj|BAA30518.1| (AP000006) 329aa
           long hypothetical dipeptide transport ATP-binding
           protein dppD [Pyrococcus horikoshii]
           Length = 329
           
 Score =  637 bits (1626), Expect = 0.0
 Identities = 312/329 (94%), Positives = 323/329 (97%)

Query: 1   MRKVPEPILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQ 60
           MRKVPEPILQVR+LTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQ
Sbjct: 1   MRKVPEPILQVRDLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQ 60

Query: 61  LIESPGRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGY 120
           LIESPGRIV GQVLYYR+DGSVVDLLKLSEEEIRKIRGNEIAYIFQDPH+SLDPLYTVGY
Sbjct: 61  LIESPGRIVGGQVLYYREDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHSSLDPLYTVGY 120

Query: 121 QIAEAMEVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGIS 180
           QIAEAMEVHGKIK+IKEGI+KAVDILKSVLIPDP RRVNNYPHELSGGMKQRVVIGIG+S
Sbjct: 121 QIAEAMEVHGKIKNIKEGIKKAVDILKSVLIPDPQRRVNNYPHELSGGMKQRVVIGIGLS 180

Query: 181 NNPRILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYA 240
           NNPRILIADEPTTALDVT+QAQILDL+N++KEKYKATVILITHNLGVVAETADRVAVMYA
Sbjct: 181 NNPRILIADEPTTALDVTVQAQILDLINQLKEKYKATVILITHNLGVVAETADRVAVMYA 240

Query: 241 GKIVEIGTVDQIFKNPLHPYTQGLLRAVPNPLTKIEKLEAIPGTVPNLITPPGGCRFHPR 300
           GKIVEIGTVDQIFKNPLHPYTQGLLRAVPNPLTKIEKLEAIPGTVPNLI PP GCRFHPR
Sbjct: 241 GKIVEIGTVDQIFKNPLHPYTQGLLRAVPNPLTKIEKLEAIPGTVPNLINPPSGCRFHPR 300

Query: 301 CPKVMSICKEKVPELKEIEPGHFVACHLY 329
           CPK M ICK+KVPELKEIEPGHFVACHLY
Sbjct: 301 CPKAMDICKQKVPELKEIEPGHFVACHLY 329


>pir||F72617 probable dipeptide transport system ATP-binding protein APE1399 -
           Aeropyrum pernix (strain K1) >gi|5105082|dbj|BAA80396.1|
           (AP000061) 333aa long hypothetical dipeptide transport
           system ATP-binding protein [Aeropyrum pernix]
           Length = 333
           
 Score =  464 bits (1180), Expect = e-130
 Identities = 216/321 (67%), Positives = 265/321 (82%)

Query: 6   EPILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIESP 65
           +PI++V NL V+FYTYAGIVKAIE VSF + +GET+ LVGETGCGKSVTSRA+T+LI  P
Sbjct: 7   DPIIEVENLKVYFYTYAGIVKAIEDVSFRICRGETYCLVGETGCGKSVTSRALTRLIYPP 66

Query: 66  GRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQIAEA 125
           GRIVEG++ YY + G  VD++ L E+E+R+IRG EIAYIFQDP A+LDPLYT+GYQ+ E 
Sbjct: 67  GRIVEGKIYYYPEPGRRVDIMSLDEKELRRIRGEEIAYIFQDPSAALDPLYTIGYQVGET 126

Query: 126 MEVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGISNNPRI 185
           M  HG+++S++EG+++AV +LK+VL+PDP +RV +YPHELSGGMKQR VIGI +SN P++
Sbjct: 127 MLAHGRVRSLREGVRRAVGVLKTVLMPDPEKRVKSYPHELSGGMKQRGVIGISLSNRPKL 186

Query: 186 LIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYAGKIVE 245
           LIADEPTTALDVTIQAQI+DLL ++K ++  T++LITHNLG+VAE  DRVAVMYAG IVE
Sbjct: 187 LIADEPTTALDVTIQAQIMDLLTQLKREHGLTLLLITHNLGLVAEYCDRVAVMYAGNIVE 246

Query: 246 IGTVDQIFKNPLHPYTQGLLRAVPNPLTKIEKLEAIPGTVPNLITPPGGCRFHPRCPKVM 305
              VD++F NPLHPYT+ L+RAVPNPL KIE LE IPGTVPNLITPP GCRFHPRCP   
Sbjct: 247 EAPVDELFSNPLHPYTRALIRAVPNPLAKIENLEHIPGTVPNLITPPPGCRFHPRCPLAF 306

Query: 306 SICKEKVPELKEIEPGHFVAC 326
             C  + P LKE  PGH  AC
Sbjct: 307 DRCSREKPLLKEYSPGHKAAC 327


>pir||F75202 dipeptide abc transporter, dipeptide-binding protein PAB0094 -
           Pyrococcus abyssi (strain Orsay)
           >gi|5457578|emb|CAB49069.1| (AJ248283) dipeptide ABC
           transporter, dipeptide-binding protein [Pyrococcus
           abyssi]
           Length = 323
           
 Score =  363 bits (921), Expect = 2e-99
 Identities = 180/324 (55%), Positives = 242/324 (74%), Gaps = 7/324 (2%)

Query: 6   EPILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIESP 65
           EP++++ NL + F T  G+VKAI+ VSFD+ KGE  AL+GETGCGKSVT++AI +L+   
Sbjct: 4   EPLVKIENLYIDFITDRGVVKAIDGVSFDIRKGEILALIGETGCGKSVTAKAIMRLLPR- 62

Query: 66  GRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQIAEA 125
             IV+G+++Y   +     LL+L E E+RKIRG EIA IFQDP  SL+P++T+  Q+ E 
Sbjct: 63  NAIVKGKIIYKGRN-----LLELPEREMRKIRGKEIAMIFQDPLTSLNPVFTIEDQMGEM 117

Query: 126 MEVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGISNNPRI 185
            +VH K+  +   + + V +LK V IPDP +RV +YP ELSGGM+QRV+I + +S  P +
Sbjct: 118 FKVH-KLPVVGSILDEIVKLLKMVKIPDPEKRVKSYPFELSGGMRQRVMIAMMLSAKPSL 176

Query: 186 LIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYAGKIVE 245
           LIADEPTTALDVTIQAQI++L+ +++EK++ +++LITHN GVVAE ADRV VMYAG++VE
Sbjct: 177 LIADEPTTALDVTIQAQIMNLMLELREKFETSILLITHNPGVVAEMADRVVVMYAGQVVE 236

Query: 246 IGTVDQIFKNPLHPYTQGLLRAVPNPLTKIEKLEAIPGTVPNLITPPGGCRFHPRCPKVM 305
           I  V++IF NPLHPYTQGLLRA+P       +LE IPG VPNL+ PP GCRFHPRC K  
Sbjct: 237 IAPVEEIFDNPLHPYTQGLLRALPRGHKTERELENIPGRVPNLLNPPKGCRFHPRCKKAK 296

Query: 306 SICKEKVPELKEIEPGHFVACHLY 329
            +C ++ P+L E+E  H+VACHLY
Sbjct: 297 EMCSKEKPKLIEVEKEHYVACHLY 320


>pir||C72300 oligopeptide ABC transporter, ATP-binding protein - Thermotoga
           maritima (strain MSB8)
           >gi|4981605|gb|AAD36139.1|AE001766_5 (AE001766)
           oligopeptide ABC transporter, ATP-binding protein
           [Thermotoga maritima]
           Length = 332
           
 Score =  350 bits (888), Expect = 2e-95
 Identities = 170/323 (52%), Positives = 237/323 (72%), Gaps = 3/323 (0%)

Query: 8   ILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIESPGR 67
           +LQ++NL  +F+T  G+VKA++ VSF++ +G T  +VGE+GCGKSVT+R+I +L+ + GR
Sbjct: 4   LLQIKNLRTYFFTDEGVVKAVDGVSFEIEEGRTLGVVGESGCGKSVTARSIIKLLSTAGR 63

Query: 68  IVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQIAEAME 127
           IV G++LY  D G +VDL+K S+EEIRK+RG  IA IFQ+P A+  P+YT+G QI E M 
Sbjct: 64  IVSGEILYNMD-GQMVDLVKFSKEEIRKVRGRHIAMIFQEPMAAFSPVYTIGDQITEGMI 122

Query: 128 VHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGISNNPRILI 187
            H  I   +E  ++AV++L+ V IP P + +++YP E SGGM+QR +I + +S NPR+LI
Sbjct: 123 YHFGITK-QEARERAVELLRRVGIPKPEKMIDSYPFEYSGGMRQRAMIAMALSCNPRLLI 181

Query: 188 ADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYAGKIVEIG 247
           ADEPTTALDVTIQAQ+LDLL  ++++YK  +++ITHN+GVVAE AD V VMY G++VE  
Sbjct: 182 ADEPTTALDVTIQAQVLDLLKDLQQEYKMAIMMITHNMGVVAEMADHVVVMYLGRVVESA 241

Query: 248 TVDQIFKNPLHPYTQGLLRAVPNPLTKIEKLEAIPGTVPNLITPPGGCRFHPRCPKVM-S 306
            V+++F NP HPYT  LLR++P    ++E+LE I G VP+    P GCRFHPRCP +M  
Sbjct: 242 PVEELFYNPKHPYTSLLLRSIPVVGKRVERLEVIEGDVPDPRNMPKGCRFHPRCPYMMKG 301

Query: 307 ICKEKVPELKEIEPGHFVACHLY 329
           IC E+ P   E+ P H V+C LY
Sbjct: 302 ICDEREPVEVEVGPEHRVSCFLY 324


>pir||A72371 oligopeptide ABC transporter, ATP-binding protein - Thermotoga
           maritima (strain MSB8)
           >gi|4981009|gb|AAD35583.1|AE001726_17 (AE001726)
           oligopeptide ABC transporter, ATP-binding protein
           [Thermotoga maritima]
           Length = 333
           
 Score =  334 bits (848), Expect = 7e-91
 Identities = 168/320 (52%), Positives = 230/320 (71%), Gaps = 8/320 (2%)

Query: 8   ILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIESPGR 67
           +L+V+NL+  FY   GIVKA+  VSF +   E   +VGETG GKSVT ++I +LI+ PG+
Sbjct: 7   LLEVKNLSTWFYMEEGIVKAVNDVSFSLNSNEVLGIVGETGSGKSVTVKSIMRLIKPPGK 66

Query: 68  IVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQIAEAME 127
           IV G+++Y   D     +LK+ E+E+ +IRG EIA IFQDP  SL+PLYT+G Q+ E + 
Sbjct: 67  IVSGEIIYKGQD-----ILKIPEKEMHRIRGKEIAMIFQDPMMSLNPLYTIGDQLMETIR 121

Query: 128 VH-GKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGISNNPRIL 186
            H G  K  +    +AV++L+ V IP+P +R+NNYP E SGGM+QRVVI I +S NP +L
Sbjct: 122 YHLGYDK--RRAYLRAVEMLELVGIPEPEKRMNNYPFEFSGGMRQRVVIAIALSCNPSVL 179

Query: 187 IADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYAGKIVEI 246
           IADEPTTALDVTIQAQIL+L+ ++++++K  +I ITH+LGV+A  ADR+ VMY G+ VEI
Sbjct: 180 IADEPTTALDVTIQAQILELMKELQKEFKTGLIFITHDLGVIASMADRIMVMYGGRQVEI 239

Query: 247 GTVDQIFKNPLHPYTQGLLRAVPNPLTKIEKLEAIPGTVPNLITPPGGCRFHPRCPKVMS 306
           GT DQIF +P HPYT+ LLR+VP    ++EKLE+IPG  P ++  P  C F PRCP+ + 
Sbjct: 240 GTSDQIFYSPRHPYTKMLLRSVPRVDKRLEKLESIPGQPPRMVDIPPVCPFLPRCPRRVE 299

Query: 307 ICKEKVPELKEIEPGHFVAC 326
            C +++PEL EIE  H+V C
Sbjct: 300 RCLKELPELSEIEENHYVRC 319


>dbj|BAB03747.1| (AP001507) oligopeptide ABC transporter (ATP-binding protein)
           [Bacillus halodurans]
           Length = 347
           
 Score =  329 bits (834), Expect = 3e-89
 Identities = 166/326 (50%), Positives = 234/326 (70%), Gaps = 8/326 (2%)

Query: 6   EPILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIESP 65
           E IL+VR+L   F+T A  VKA++ V+F V KG+T  +VGE+G GKS+TS +I +LI+ P
Sbjct: 10  ETILEVRDLRTSFFTEAFEVKAVDGVTFSVPKGKTLGIVGESGSGKSITSLSILKLIQEP 69

Query: 66  GRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQIAEA 125
           G++V G++ +  ++     L+  +E  +RKIRGNEI+ IFQ+P  SL+P+YTVG QI+E+
Sbjct: 70  GKVVGGEINFKGEN-----LVTKNEAYMRKIRGNEISMIFQEPMTSLNPVYTVGQQISES 124

Query: 126 MEVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGISNNPRI 185
             +H K+   KE ++++VD+LK V IP P +RV+ YPHELSGGM+QRV+I + ++ NP +
Sbjct: 125 FRIHEKLGK-KEALKRSVDMLKLVGIPSPEKRVHQYPHELSGGMRQRVMIAMALACNPEL 183

Query: 186 LIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYAGKIVE 245
           LIADEPTTALDVTIQAQIL+L+  ++++   ++I+ITH+LGVVAET D VAVMY GK+VE
Sbjct: 184 LIADEPTTALDVTIQAQILELMKDLQDRLGMSIIMITHDLGVVAETCDYVAVMYCGKVVE 243

Query: 246 IGTVDQIFKNPLHPYTQGLLRAVPNPLTKI--EKLEAIPGTVPNLITPPGGCRFHPRCPK 303
              V  +FKNP HPYT GLL ++P     +  E+L  I G VP+    P GCRF PRCP 
Sbjct: 244 YADVKTLFKNPRHPYTVGLLNSLPRHDIDLEDEELSVIKGNVPSPADMPEGCRFAPRCPF 303

Query: 304 VMSICKEKVPELKEIEPGHFVACHLY 329
              ICKE++P+L+  E G+ + C +Y
Sbjct: 304 ASDICKERLPDLETDENGNQIRCWVY 329


>pir||H75380 peptide ABC transporter, ATP-binding protein - Deinococcus
           radiodurans (strain R1)
           >gi|6459331|gb|AAF11130.1|AE002000_6 (AE002000) peptide
           ABC transporter, ATP-binding protein [Deinococcus
           radiodurans]
           Length = 386
           
 Score =  326 bits (826), Expect = 3e-88
 Identities = 168/331 (50%), Positives = 228/331 (68%), Gaps = 11/331 (3%)

Query: 6   EPILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIESP 65
           E +L V NL  +F T  G+VK+++ V+F + KGET A+VGE+G GKSVTS  + +LI  P
Sbjct: 31  EVLLAVNNLKTYFNTDDGVVKSVDGVTFHIKKGETLAVVGESGSGKSVTSLTVMRLIPMP 90

Query: 66  -GRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQIAE 124
            G+I  G++L+   DG   +L+ +SE E+R+IRGN+I+ IFQ+P  SL+P+YTVG QIAE
Sbjct: 91  PGQIAGGEILFTGKDGVQRNLVNVSEAEMRRIRGNDISMIFQEPMTSLNPVYTVGDQIAE 150

Query: 125 AMEVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGISNNPR 184
           A+ +H + K+ KE +  A D+L+ V IP P +RVN YPH++SGGM+QRV+I + +S  P 
Sbjct: 151 AVVLH-QGKTRKEAMDVATDMLRFVGIPAPEKRVNEYPHQMSGGMRQRVMIAMALSCKPA 209

Query: 185 ILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYAGKIV 244
           +LIADEPTTALDVTIQAQILDL+  ++ +   +++ ITHNLGVVAE ADRV VMY G++V
Sbjct: 210 LLIADEPTTALDVTIQAQILDLMRNLQREVGMSILFITHNLGVVAEMADRVVVMYGGRVV 269

Query: 245 EIGTVDQIFKNPLHPYTQGLLRAVPNPL---------TKIEKLEAIPGTVPNLITPPGGC 295
           E G V +IFK P HPYT GLL ++P P             ++LEAIPG VPN +  P GC
Sbjct: 270 EEGDVIEIFKAPRHPYTMGLLNSIPRPSEDEHAHVPGQPKKRLEAIPGNVPNPLNLPPGC 329

Query: 296 RFHPRCPKVMSICKEKVPELKEIEPGHFVAC 326
            F PRC   +  C + VP L++   GH   C
Sbjct: 330 TFEPRCKFAVPQCSQAVPALEDTGGGHMARC 360


>pir||C72424 oligopeptide ABC transporter, ATP-binding protein - Thermotoga
           maritima (strain MSB8)
           >gi|4980544|gb|AAD35152.1|AE001692_9 (AE001692)
           oligopeptide ABC transporter, ATP-binding protein
           [Thermotoga maritima]
           Length = 331
           
 Score =  323 bits (818), Expect = 2e-87
 Identities = 165/327 (50%), Positives = 233/327 (70%), Gaps = 5/327 (1%)

Query: 6   EPILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIESP 65
           E +L++R+L V+F    G VKA++ VSFD+ +GE   LVGE+GCGKSVT+++I +++   
Sbjct: 2   EKVLEIRDLKVYFDLTEGTVKAVDGVSFDIRRGEILGLVGESGCGKSVTAQSILRILPKS 61

Query: 66  GRIVEGQVLYYRDDGSVVDLLKLSEE--EIRKIRGNEIAYIFQDPHASLDPLYTVGYQIA 123
            RIV G+++++R+ G  +DL +L  E  EIR IRG +I+ IFQ+P AS  P+YTVG Q+ 
Sbjct: 62  ARIVNGEIVFHRN-GKTLDLTRLDPEGEEIRDIRGKDISMIFQEPMASFSPVYTVGAQMI 120

Query: 124 EAMEVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGISNNP 183
           EA+ +H  + S +E  ++ V++LK V IP+  + V+ YP ELSGGM QR +I + +S NP
Sbjct: 121 EAILLHENV-SKEEARKRVVEMLKKVKIPNAEKVVDMYPFELSGGMLQRCMIAMAMSLNP 179

Query: 184 RILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYAGKI 243
            +L+ADEPTTALDVTIQAQIL L+ +++++Y ++++LITH++GVVA+ ADRVAVMY G I
Sbjct: 180 TLLLADEPTTALDVTIQAQILYLMKELQKEYHSSILLITHDMGVVAQMADRVAVMYLGNI 239

Query: 244 VEIGTVDQIFKNPLHPYTQGLLRAVPNPLTKIEKLEAIPGTVPNLITPPGGCRFHPRCPK 303
           VE   V ++FKNPLHPYTQ LLR++P    +  +LE I G VP+    P GCRFH RC K
Sbjct: 240 VETAEVFELFKNPLHPYTQALLRSIPKIGIRKTRLETIKGMVPDPYNLPTGCRFHNRCEK 299

Query: 304 VM-SICKEKVPELKEIEPGHFVACHLY 329
            M  +C  K P   E++PGH V C LY
Sbjct: 300 FMKGLCDVKEPPEVEVKPGHKVKCFLY 326


>pir||D72371 oligopeptide ABC transporter, ATP-binding protein - Thermotoga
           maritima (strain MSB8)
           >gi|4981012|gb|AAD35586.1|AE001726_20 (AE001726)
           oligopeptide ABC transporter, ATP-binding protein
           [Thermotoga maritima]
           Length = 327
           
 Score =  322 bits (817), Expect = 3e-87
 Identities = 160/320 (50%), Positives = 232/320 (72%), Gaps = 7/320 (2%)

Query: 11  VRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIESPGRIVE 70
           + NL  +FYT  G+VKA++ VSF+V +GET  +VGE+G GKSVTS +I +L++  G+IV+
Sbjct: 1   MENLKTYFYTEDGVVKAVDGVSFEVREGETLGIVGESGSGKSVTSLSIMRLLDQNGKIVD 60

Query: 71  GQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQIAEAMEVHG 130
           G++++   +     LL+LSE E+RKIRG EIA IFQ+P  +L+P++T+G QI EA+ +H 
Sbjct: 61  GKIIFKGRN-----LLELSENEMRKIRGKEIAMIFQEPMVALNPVFTIGDQIMEAIILHQ 115

Query: 131 KIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGISNNPRILIADE 190
            + S KE  + A+D+L+ V IP+P +RV+ YPH+LSGGM+QR +I + +S  P +LIADE
Sbjct: 116 NV-SEKEARKMAIDLLRKVGIPEPEKRVDEYPHQLSGGMRQRAMIAMALSCRPSLLIADE 174

Query: 191 PTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYAGKIVEIGTVD 250
           PTTALDVTIQAQIL+L+ +++++Y   +ILITH++GVVAE +D+VAVMYAGK+VE G V 
Sbjct: 175 PTTALDVTIQAQILELMKELQKEYGMAIILITHDMGVVAEMSDKVAVMYAGKVVEYGDVK 234

Query: 251 QIFKNPLHPYTQGLLRAVPNPLTKIEKLEAIPGTVPNLITPPGGCRFHPRCPKV-MSICK 309
            IF  P HPYT  LL ++P    + E+L++IPG VP+ +  P GC+FHPRC       C 
Sbjct: 235 TIFTEPKHPYTYALLESIPRIDVEQERLKSIPGNVPDPLNFPPGCKFHPRCEFFEKGKCD 294

Query: 310 EKVPELKEIEPGHFVACHLY 329
            + PEL++++  H V C  +
Sbjct: 295 VEEPELEDLDGNHKVRCFFW 314


>sp|Q53193|Y4TR_RHISN PROBABLE PEPTIDE ABC TRANSPORTER ATP-BINDING PROTEIN Y4TR
           >gi|1486422|emb|CAA92400.1| (Z68203) OppD homologue
           [Rhizobium sp.] >gi|2182648|gb|AAB91871.1| (AE000098)
           Y4tR [Rhizobium sp. NGR234]
           Length = 335
           
 Score =  317 bits (803), Expect = 1e-85
 Identities = 160/321 (49%), Positives = 226/321 (69%), Gaps = 8/321 (2%)

Query: 8   ILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLI-ESPG 66
           +L VR+L  HFY    + +A+  V+F V  GE   +VGE+GCGKSVT+ +I +L+ +   
Sbjct: 12  LLDVRDLETHFYGEESVTRALGGVNFHVKSGEMLGIVGESGCGKSVTALSILRLLPKQTA 71

Query: 67  RIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQIAEAM 126
           + V G+V++   +     LL+LSE ++R++RGN IA IFQDP  SL P++TVG QIAEA+
Sbjct: 72  KTVGGEVIFKGRN-----LLELSERQMREVRGNRIAMIFQDPMTSLSPVHTVGRQIAEAV 126

Query: 127 EVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGISNNPRIL 186
           ++HG++ S  E ++KA+++L+ V I DP RR+NNYPHE+SGGM+QR +I + ++ +P +L
Sbjct: 127 QIHGRV-SRAEALEKALEMLRLVRIADPERRLNNYPHEMSGGMRQRAMIAMALACSPELL 185

Query: 187 IADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYAGKIVEI 246
           IADEPTTALDVTIQAQIL L+  +K++    V+ ITH+LGVVAET  RV VMYAG+IVE 
Sbjct: 186 IADEPTTALDVTIQAQILRLIVDLKDRMGTAVMFITHDLGVVAETCQRVIVMYAGRIVEQ 245

Query: 247 GTVDQIFKNPLHPYTQGLLRAVPNPLT-KIEKLEAIPGTVPNLITPPGGCRFHPRCPKVM 305
            +V  +F  P HPYT+ L+ +VP+    +  +L  IPG VP+L  P  GC F  RCP  +
Sbjct: 246 ASVTDLFARPTHPYTRALMNSVPDRRRGRQSRLPEIPGVVPSLREPLVGCSFAERCPFAI 305

Query: 306 SICKEKVPELKEIEPGHFVAC 326
            +C+EK+P L EI+PGH  AC
Sbjct: 306 GVCREKMPVLSEIQPGHAAAC 326


>gb|AAF73093.1|AF103793_4 (AF103793) ATPase OppD [Listeria monocytogenes]
           Length = 358
           
 Score =  312 bits (791), Expect = 4e-84
 Identities = 168/324 (51%), Positives = 226/324 (68%), Gaps = 7/324 (2%)

Query: 6   EPILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLI-ES 64
           E +L+V++L + F+TYAG VKAI  V+FD+YKGET A+VGE+G GKSVT+++I +L+ E 
Sbjct: 2   EKLLEVKDLNISFHTYAGEVKAIRGVNFDLYKGETLAIVGESGSGKSVTTKSIMRLLPEG 61

Query: 65  PGRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQIAE 124
              I  GQ+L+     + +D+ K  E++++KIRG +IA IFQDP  SL+P  T+G QI+E
Sbjct: 62  NSEIKSGQILF-----NGMDIAKAHEKQMQKIRGKDIAMIFQDPMTSLNPTMTIGKQISE 116

Query: 125 AMEVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGISNNPR 184
            +  H KI S  E  + A+ +L+ V I +   R+  YPH+ SGGM+QRVVI I ++ NP+
Sbjct: 117 PLIKHQKI-SKHEAHKTALRLLQLVGIANAEERIKQYPHQFSGGMRQRVVIAISLACNPQ 175

Query: 185 ILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYAGKIV 244
           ILIADEPTTALDVTIQAQILDL+  +++K   ++I ITH+LGVVA  ADRVAVMY GKIV
Sbjct: 176 ILIADEPTTALDVTIQAQILDLMKDLQKKIDTSIIFITHDLGVVANVADRVAVMYGGKIV 235

Query: 245 EIGTVDQIFKNPLHPYTQGLLRAVPNPLTKIEKLEAIPGTVPNLITPPGGCRFHPRCPKV 304
           EIGTVD+IF NP HPYT GL+ ++P   T  E+L  IPGT P+L+ PP G  F  R    
Sbjct: 236 EIGTVDEIFYNPQHPYTWGLISSMPTLDTDDEELFVIPGTPPDLLHPPKGDAFAARNKYA 295

Query: 305 MSICKEKVPELKEIEPGHFVACHL 328
           M I  E+ P L ++   H+ A  L
Sbjct: 296 MQIDLEEEPPLFKVSDTHYAATWL 319


>gb|AAG22037.1|AF305387_4 (AF305387) OppD [Bacillus thuringiensis]
           Length = 347
           
 Score =  311 bits (789), Expect = 6e-84
 Identities = 165/322 (51%), Positives = 232/322 (71%), Gaps = 7/322 (2%)

Query: 8   ILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIESP-G 66
           +L+V++L V F T+AG V+A+  V+FD+ KGET A+VGE+G GKSVTS+A+  LI +P G
Sbjct: 4   LLEVKDLQVSFDTHAGEVQAVRGVTFDLKKGETLAIVGESGSGKSVTSKALMGLIPNPPG 63

Query: 67  RIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQIAEAM 126
           RI  G++++   +G   DL KL+E+E++++RG +IA IFQDP  SL+P  T+G QI E +
Sbjct: 64  RIKNGEIVF---EGR--DLTKLTEKEMQQVRGKDIAMIFQDPMTSLNPTMTIGNQIMEGL 118

Query: 127 EVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGISNNPRIL 186
             H  + S  +  + A++++  V IP+P  R+  YPH+ SGGM+QRVVI + ++ NP++L
Sbjct: 119 IKHQGM-SKADARKVALELIDLVGIPNPEARLKQYPHQFSGGMRQRVVIAMALACNPKLL 177

Query: 187 IADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYAGKIVEI 246
           IADEPTTALDVTIQAQIL+L+  +++K +A +I ITH+LGVVA  ADRVAVMYAGK+VEI
Sbjct: 178 IADEPTTALDVTIQAQILELMKDIQQKTEAAIIFITHDLGVVANVADRVAVMYAGKVVEI 237

Query: 247 GTVDQIFKNPLHPYTQGLLRAVPNPLTKIEKLEAIPGTVPNLITPPGGCRFHPRCPKVMS 306
           GTVD+IF NP HPYT GL+ ++P+     E+L AIPGT P+L+ PP G  F PR P+ + 
Sbjct: 238 GTVDEIFYNPKHPYTWGLIASMPSLDGSEEELYAIPGTPPDLLKPPKGDAFAPRNPQALK 297

Query: 307 ICKEKVPELKEIEPGHFVACHL 328
           I  E  P L ++   H+ A  L
Sbjct: 298 IDFEMDPPLFKVSDTHYAATWL 319


>pir||A72452 probable peptide transport ATP-binding protein APE2261 - Aeropyrum
           pernix (strain K1) >gi|5105962|dbj|BAA81273.1|
           (AP000064) 320aa long hypothetical peptide transport
           ATP-binding protein [Aeropyrum pernix]
           Length = 320
           
 Score =  309 bits (783), Expect = 3e-83
 Identities = 157/319 (49%), Positives = 219/319 (68%), Gaps = 8/319 (2%)

Query: 8   ILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIESPGR 67
           +L +++L VH+YT  GIV+A++ VS  V KGE  ++VGE+G GKS  + +I +LI  PGR
Sbjct: 7   VLDIQDLKVHYYTLTGIVRAVDGVSLSVNKGEWISIVGESGSGKSTLALSIPRLIMPPGR 66

Query: 68  IVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQIAEAME 127
           IV G++LY     S VDLL L+ EE+R+ RG EI  +FQDP A LDP  TVG QIAE++ 
Sbjct: 67  IVGGRILY-----SGVDLLSLAGEELRRYRGREIGMVFQDPTAYLDPYRTVGSQIAESLL 121

Query: 128 VHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGISNNPRILI 187
            HG   S  E    A D L+ V IP    R + YPH+LSGG +QRV I   ++  P+ILI
Sbjct: 122 EHGLASSGSEAESMAGDALELVGIPRD--RASVYPHQLSGGQRQRVAIAAAVALEPKILI 179

Query: 188 ADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYAGKIVEIG 247
           ADEPTTALDV +QA+I+DL+ K++E+   TV+L+TH++G+ AE +DR+AVMYAG++VEIG
Sbjct: 180 ADEPTTALDVVVQAKIMDLMKKLQEERGLTVMLVTHDIGLAAEYSDRIAVMYAGELVEIG 239

Query: 248 TVDQIFKNPLHPYTQGLLRAVPNPLTKIEKLEAIPGTVPNLITPPGGCRFHPRCPKVMSI 307
             + +  NP+HPYT+ L+++VP+P    E ++ IPG+ P+L  PP GCRFHPRCP    +
Sbjct: 240 PAEDVVSNPIHPYTEMLIKSVPDPWEDRE-VKPIPGSPPDLRNPPPGCRFHPRCPLRQPL 298

Query: 308 CKEKVPELKEIEPGHFVAC 326
           C    P L+ ++ G   +C
Sbjct: 299 CTNTRPSLRMVDGGRGHSC 317


>dbj|BAB04069.1| (AP001508) oligopeptide ABC transporter (ATP-binding protein)
           [Bacillus halodurans]
           Length = 329
           
 Score =  307 bits (778), Expect = 1e-82
 Identities = 161/324 (49%), Positives = 217/324 (66%), Gaps = 6/324 (1%)

Query: 6   EPILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIESP 65
           + +L VR L  +FYT +G V ++  VSF+V  GET A+VGE+GCGKSVTS +I  L+ SP
Sbjct: 4   DTLLSVRELKTYFYTESGAVPSVNGVSFEVKHGETVAVVGESGCGKSVTSLSIMGLVRSP 63

Query: 66  GRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQIAEA 125
           G+IV G +   R +G   DL  +SE E RK+RGNE++ IFQ+P  SL+PL+T+G Q+ E 
Sbjct: 64  GKIVGGDI---RFNGQ--DLTTISEREYRKLRGNELSMIFQEPLTSLNPLFTIGNQLGEV 118

Query: 126 MEVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGISNNPRI 185
           +  H ++   +E  QK +++LK V IP   +   +YPH+LSGGM+QRV+I + ++  P++
Sbjct: 119 ILQHQQVTK-EEAKQKGIEMLKKVGIPRAEQVYRSYPHQLSGGMRQRVMIAMALACEPKL 177

Query: 186 LIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYAGKIVE 245
           LIADEPTTALDVTIQAQIL L+ K+ ++    ++LITH+LGVVAE AD V VMYAG++VE
Sbjct: 178 LIADEPTTALDVTIQAQILQLMRKLVKENDTAILLITHDLGVVAEMADTVIVMYAGQVVE 237

Query: 246 IGTVDQIFKNPLHPYTQGLLRAVPNPLTKIEKLEAIPGTVPNLITPPGGCRFHPRCPKVM 305
              V  +F  P HPYTQGLL + PN     EKL++I GTVP   T P GCRF PRC    
Sbjct: 238 QADVFTLFATPAHPYTQGLLASTPNIHASGEKLQSIEGTVPTHETMPKGCRFFPRCLHAT 297

Query: 306 SICKEKVPELKEIEPGHFVACHLY 329
             C  + P L +   G  V C L+
Sbjct: 298 EQCVHQEPPLMKTGRGQHVRCWLF 321


>sp|P26905|DPPD_BACSU DIPEPTIDE TRANSPORT ATP-BINDING PROTEIN DPPD >gi|98274|pir||S16650
           dipeptide transport ATP-binding protein dppD - Bacillus
           subtilis >gi|48807|emb|CAA40005.1| (X56678) dciAD
           [Bacillus subtilis] >gi|2632016|emb|CAA05575.1|
           (AJ002571) DppD [Bacillus subtilis]
           >gi|2633649|emb|CAB13152.1| (Z99110) dipeptide ABC
           transporter (ATP-binding protein) [Bacillus subtilis]
           Length = 335
           
 Score =  307 bits (778), Expect = 1e-82
 Identities = 165/324 (50%), Positives = 216/324 (65%), Gaps = 7/324 (2%)

Query: 6   EPILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIES- 64
           E +L V+NL V F TY G V+A+  VSFD+YKGETFA+VGE+GCGKSVTS++I  L+   
Sbjct: 2   EKVLSVQNLHVSFTTYGGTVQAVRGVSFDLYKGETFAIVGESGCGKSVTSQSIMGLLPPY 61

Query: 65  PGRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQIAE 124
             ++ +G++L+   D     L +LS++E+R IRG +I+ IFQDP  +L+P  TVG Q+ E
Sbjct: 62  SAKVTDGRILFKNKD-----LCRLSDKEMRGIRGADISMIFQDPMTALNPTLTVGDQLGE 116

Query: 125 AMEVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGISNNPR 184
           A+  H K+ S K   ++ + +L  V IPDP  R+  YPH+ SGGM+QR+VI + +   P 
Sbjct: 117 ALLRHKKM-SKKAARKEVLSMLSLVGIPDPGERLKQYPHQFSGGMRQRIVIAMALICEPD 175

Query: 185 ILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYAGKIV 244
           ILIADEPTTALDVTIQAQIL+L  +++ K   +VILITH+LGVVA+ ADRVAVMYAGK+ 
Sbjct: 176 ILIADEPTTALDVTIQAQILELFKEIQRKTDVSVILITHDLGVVAQVADRVAVMYAGKMA 235

Query: 245 EIGTVDQIFKNPLHPYTQGLLRAVPNPLTKIEKLEAIPGTVPNLITPPGGCRFHPRCPKV 304
           EIGT   IF  P HPYT+GLL +VP       +L  I GT P+L +PP GC F  RCP  
Sbjct: 236 EIGTRKDIFYQPQHPYTKGLLGSVPRLDLNGAELTPIDGTPPDLFSPPPGCPFAARCPNR 295

Query: 305 MSICKEKVPELKEIEPGHFVACHL 328
           M +C    P        H V C L
Sbjct: 296 MVVCDRVYPGQTIRSDSHTVNCWL 319


>pir||H72215 oligopeptide ABC transporter, ATP-binding protein - Thermotoga
           maritima (strain MSB8)
           >gi|4982327|gb|AAD36814.1|AE001813_6 (AE001813)
           oligopeptide ABC transporter, ATP-binding protein
           [Thermotoga maritima]
           Length = 324
           
 Score =  303 bits (769), Expect = 1e-81
 Identities = 153/321 (47%), Positives = 219/321 (67%), Gaps = 6/321 (1%)

Query: 8   ILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIESPGR 67
           +L V NL V F+   GIVKA++ +S+ + KGE+  +VGE+G GKSV+  ++ +LI   GR
Sbjct: 4   LLNVNNLKVEFHRVEGIVKAVDGISYKLNKGESLGIVGESGSGKSVSVLSLLRLINRNGR 63

Query: 68  IVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQIAEAME 127
           IV+G+ ++   D     LLKL++EE+R IRG +I+ IFQ+P  SL+P+  VG Q+ E + 
Sbjct: 64  IVDGEAIFLGKD-----LLKLNKEELRNIRGKDISIIFQNPMTSLNPIIRVGIQVMEPII 118

Query: 128 VHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGISNNPRILI 187
            H  +K+ +E  ++A+++L+ V IP+  +R  NYP + SGGM+QRV+I + ++ +P++LI
Sbjct: 119 WHRLMKN-EEARERAIELLERVGIPESPKRFLNYPFQFSGGMRQRVMIAMALACHPKLLI 177

Query: 188 ADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYAGKIVEIG 247
           ADEPTTALDVTIQAQI++LL ++KE+Y  +VI ITH+L V     DR+  MYAGKIVE  
Sbjct: 178 ADEPTTALDVTIQAQIMELLQELKEEYGMSVIFITHDLSVATNFCDRIITMYAGKIVEEA 237

Query: 248 TVDQIFKNPLHPYTQGLLRAVPNPLTKIEKLEAIPGTVPNLITPPGGCRFHPRCPKVMSI 307
            V++I K PLHPYT+GLL +     ++ +KL  IPG  PN    P GC+FHPRC   M I
Sbjct: 238 PVEEILKTPLHPYTKGLLNSTLEIGSRGKKLVPIPGNPPNPTKHPSGCKFHPRCSFAMEI 297

Query: 308 CKEKVPELKEIEPGHFVACHL 328
           C+ + P L  I   H VACHL
Sbjct: 298 CQREEPPLVNISENHRVACHL 318


>emb|CAC05750.1| (AL391751) putative peptide transport system ATP-binding protein
           [Streptomyces coelicolor]
           Length = 327
           
 Score =  302 bits (766), Expect = 3e-81
 Identities = 157/326 (48%), Positives = 223/326 (68%), Gaps = 10/326 (3%)

Query: 8   ILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIE-SPG 66
           +L+VR+L V F+T  G+ KA+  VS+ V  GET A++GE+G GKSVT++ I  +++  PG
Sbjct: 2   LLEVRDLHVEFHTRDGVAKAVNGVSYGVDAGETLAVLGESGSGKSVTAQTIMGILDIPPG 61

Query: 67  RIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQIAEAM 126
           R+  G++L+   +G   DLLKL EEE RK+RG E+A IFQD  +SL+P+ TVG Q+AE  
Sbjct: 62  RVTAGEILF---EGR--DLLKLKEEERRKVRGAEMAMIFQDALSSLNPVLTVGAQLAEMF 116

Query: 127 EVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGISNNPRIL 186
            VH  + S K+   KAV+++  V IP    RV  YPH+ SGGM+QR++I + ++  P+++
Sbjct: 117 TVHRGM-SRKDAHAKAVELMDRVRIPAAKERVRQYPHQFSGGMRQRIMIAMAMALEPKLI 175

Query: 187 IADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYAGKIVEI 246
           IADEPTTALDVT+QAQ++DLL +++ +    +ILITH+LGVVA+ AD++AVMYAG+IVE 
Sbjct: 176 IADEPTTALDVTVQAQVMDLLAELQRELHMGLILITHDLGVVADVADKIAVMYAGRIVET 235

Query: 247 GTVDQIFKNPLHPYTQGLLRAVPNPLTKIEKLEAIPGTVPNLITPPGGCRFHPRCPKVMS 306
             V  I+K P HPYT+GLL ++P    K ++L AI G  PNL   P GC FHPRCP    
Sbjct: 236 APVHDIYKAPAHPYTRGLLESIPRLDQKGQELYAIKGLPPNLTRIPPGCAFHPRCPMAQD 295

Query: 307 ICKEKVPELKEI---EPGHFVACHLY 329
           +C+  VP L ++   +     ACH +
Sbjct: 296 VCRTDVPPLYDVTESDAERGSACHFW 321


>sp|P24136|OPPD_BACSU OLIGOPEPTIDE TRANSPORT ATP-BINDING PROTEIN OPPD
           >gi|7442529|pir||B69669 oligopeptide transport
           ATP-binding protein oppD - Bacillus subtilis
           >gi|2633500|emb|CAB13003.1| (Z99110) oligopeptide ABC
           transporter (ATP-binding protein) [Bacillus subtilis]
           Length = 358
           
 Score =  300 bits (761), Expect = 1e-80
 Identities = 167/320 (52%), Positives = 223/320 (69%), Gaps = 10/320 (3%)

Query: 8   ILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIESP-G 66
           +L+V++L + F TY G V+AI  V+F + KGET A+VGE+G GKSVTS+AI +LI  P G
Sbjct: 7   LLEVKDLAISFKTYGGEVQAIRGVNFHLDKGETLAIVGESGSGKSVTSQAIMKLIPMPPG 66

Query: 67  RIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQIAEAM 126
               G++L+   +G   DL+ LSE+E++ +RG EI  IFQDP  SL+P   VG QI E +
Sbjct: 67  YFKRGEILF---EGK--DLVPLSEKEMQNVRGKEIGMIFQDPMTSLNPTMKVGKQITEVL 121

Query: 127 EVHGKIKSIKEGIQK-AVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGISNNPRI 185
             H KI   KE  +K AV++L+ V IP P +RVN +PHE SGGM+QRVVI + ++ NP++
Sbjct: 122 FKHEKIS--KEAAKKRAVELLELVGIPMPEKRVNQFPHEFSGGMRQRVVIAMALAANPKL 179

Query: 186 LIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYAGKIVE 245
           LIADEPTTALDVTIQAQIL+L+  +++K   ++I ITH+LGVVA  ADRVAVMYAG+IVE
Sbjct: 180 LIADEPTTALDVTIQAQILELMKDLQKKIDTSIIFITHDLGVVANVADRVAVMYAGQIVE 239

Query: 246 IGTVDQIFKNPLHPYTQGLLRAVPN-PLTKIEKLEAIPGTVPNLITPPGGCRFHPRCPKV 304
            GTVD+IF +P HPYT GLL ++P    +  E+L AIPGT P+L  PP G  F  R    
Sbjct: 240 TGTVDEIFYDPRHPYTWGLLASMPTLESSGEEELTAIPGTPPDLTNPPKGDAFALRSSYA 299

Query: 305 MSICKEKVPELKEIEPGHFV 324
           M I  E+ P + ++   H+V
Sbjct: 300 MKIDFEQEPPMFKVSDTHYV 319


>pir||D38447 sporulation initiation protein spo0KD - Bacillus subtilis
           >gi|580898|emb|CAA39790.1| (X56347) OppD [Bacillus
           subtilis]
           Length = 336
           
 Score =  300 bits (761), Expect = 1e-80
 Identities = 167/320 (52%), Positives = 223/320 (69%), Gaps = 10/320 (3%)

Query: 8   ILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIESP-G 66
           +L+V++L + F TY G V+AI  V+F + KGET A+VGE+G GKSVTS+AI +LI  P G
Sbjct: 7   LLEVKDLAISFKTYGGEVQAIRGVNFHLDKGETLAIVGESGSGKSVTSQAIMKLIPMPPG 66

Query: 67  RIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQIAEAM 126
               G++L+   +G   DL+ LSE+E++ +RG EI  IFQDP  SL+P   VG QI E +
Sbjct: 67  YFKRGEILF---EGK--DLVPLSEKEMQNVRGKEIGMIFQDPMTSLNPTMKVGKQITEVL 121

Query: 127 EVHGKIKSIKEGIQK-AVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGISNNPRI 185
             H KI   KE  +K AV++L+ V IP P +RVN +PHE SGGM+QRVVI + ++ NP++
Sbjct: 122 FKHEKIS--KEAAKKRAVELLELVGIPMPEKRVNQFPHEFSGGMRQRVVIAMALAANPKL 179

Query: 186 LIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYAGKIVE 245
           LIADEPTTALDVTIQAQIL+L+  +++K   ++I ITH+LGVVA  ADRVAVMYAG+IVE
Sbjct: 180 LIADEPTTALDVTIQAQILELMKDLQKKIDTSIIFITHDLGVVANVADRVAVMYAGQIVE 239

Query: 246 IGTVDQIFKNPLHPYTQGLLRAVPN-PLTKIEKLEAIPGTVPNLITPPGGCRFHPRCPKV 304
            GTVD+IF +P HPYT GLL ++P    +  E+L AIPGT P+L  PP G  F  R    
Sbjct: 240 TGTVDEIFYDPRHPYTWGLLASMPTLESSGEEELTAIPGTPPDLTNPPKGDAFALRSSYA 299

Query: 305 MSICKEKVPELKEIEPGHFV 324
           M I  E+ P + ++   H+V
Sbjct: 300 MKIDFEQEPPMFKVSDTHYV 319


>gb|AAA62691.1| (M57689) sporulation protein [Bacillus subtilis]
           Length = 358
           
 Score =  300 bits (761), Expect = 1e-80
 Identities = 167/320 (52%), Positives = 223/320 (69%), Gaps = 10/320 (3%)

Query: 8   ILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIESP-G 66
           +L+V++L + F TY G V+AI  V+F + KGET A+VGE+G GKSVTS+AI +LI  P G
Sbjct: 7   LLEVKDLAISFKTYGGEVQAIRGVNFHLDKGETLAIVGESGSGKSVTSQAIMKLIPMPPG 66

Query: 67  RIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQIAEAM 126
               G++L+   +G   DL+ LSE+E++ +RG EI  IFQDP  SL+P   VG QI E +
Sbjct: 67  YFKRGEILF---EGK--DLVPLSEKEMQNVRGKEIGMIFQDPMTSLNPTMKVGKQITEVL 121

Query: 127 EVHGKIKSIKEGIQK-AVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGISNNPRI 185
             H KI   KE  +K AV++L+ V IP P +RVN +PHE SGGM+QRVVI + ++ NP++
Sbjct: 122 FKHEKIS--KEAAKKRAVELLELVGIPMPEKRVNQFPHEFSGGMRQRVVIAMALAANPKL 179

Query: 186 LIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYAGKIVE 245
           LIADEPTTALDVTIQAQIL+L+  +++K   ++I ITH+LGVVA  ADRVAVMYAG+IVE
Sbjct: 180 LIADEPTTALDVTIQAQILELMKDLQKKIDTSIIFITHDLGVVANVADRVAVMYAGQIVE 239

Query: 246 IGTVDQIFKNPLHPYTQGLLRAVPN-PLTKIEKLEAIPGTVPNLITPPGGCRFHPRCPKV 304
            GTVD+IF +P HPYT GLL ++P    +  E+L AIPGT P+L  PP G  F  R    
Sbjct: 240 TGTVDEIFYDPRHPYTWGLLASMPTLESSGEEELTAIPGTPPDLTNPPKGDAFALRSSYA 299

Query: 305 MSICKEKVPELKEIEPGHFV 324
           M I  E+ P + ++   H+V
Sbjct: 300 MKIDFEQEPPMFKVSDTHYV 319


>gb|AAC64255.1| (AF042861) putative OppD [Treponema denticola]
           Length = 330
           
 Score =  300 bits (761), Expect = 1e-80
 Identities = 150/323 (46%), Positives = 220/323 (67%), Gaps = 9/323 (2%)

Query: 7   PILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIESPG 66
           P+L+V+NL  +F+T  G +KA++ V F +  G+T  +VGE+G GKS+T+ +I  L+E PG
Sbjct: 4   PLLEVKNLHTYFFTNKGTIKAVQGVDFTIEAGKTLGIVGESGSGKSITAFSILNLLEYPG 63

Query: 67  RIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQIAEAM 126
           +IV+G++ +       ++L+ L ++EIRKIRGN+I+ IFQ+P  SL+P++ +G Q++E +
Sbjct: 64  KIVQGEINF-----GGINLVNLGKKEIRKIRGNDISMIFQEPMTSLNPVHRIGRQLSEPL 118

Query: 127 EVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGISNNPRIL 186
            +H  + S KE    A+D+L+ V IP+P   V NYP +LSGGM+QRV+I + ++  PR+L
Sbjct: 119 ILHQHM-SKKEAWAAAIDLLREVKIPNPENVVYNYPFQLSGGMRQRVMIAMALACKPRLL 177

Query: 187 IADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYAGKIVEI 246
           IADEPTTALDVTIQAQI  L+N +K+K+   ++ ITH+LG +AE AD VAVMY G+IVE 
Sbjct: 178 IADEPTTALDVTIQAQIFKLMNDLKKKHNTAIMFITHDLGAIAELADDVAVMYTGEIVER 237

Query: 247 GTVDQIFKNPL---HPYTQGLLRAVPNPLTKIEKLEAIPGTVPNLITPPGGCRFHPRCPK 303
             VD IF       HPY +GLL ++P    ++E L  I G+VP+ +  P GCRF  RC  
Sbjct: 238 APVDVIFDRQTQFSHPYKEGLLESIPLLDEEVEYLAQIQGSVPHPLKLPKGCRFSTRCEY 297

Query: 304 VMSICKEKVPELKEIEPGHFVAC 326
               C+ + PEL E+E GH + C
Sbjct: 298 ATEKCRNEKPELVEVEEGHLIRC 320


>pir||G71211 probable oligopeptide transport ATP-binding protein appD -
           Pyrococcus horikoshii >gi|3258403|dbj|BAA31086.1|
           (AP000007) 322aa long hypothetical oligopeptide
           transport ATP-binding protein appD [Pyrococcus
           horikoshii]
           Length = 322
           
 Score =  300 bits (759), Expect = 2e-80
 Identities = 157/322 (48%), Positives = 222/322 (68%), Gaps = 9/322 (2%)

Query: 8   ILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIESPGR 67
           IL+V+NL ++++T  G VKA++ V+FD+ KGE   L GE+GCGKS     +  + + PGR
Sbjct: 8   ILEVKNLKMYYFTSRGPVKAVDDVTFDLEKGEVLGLAGESGCGKSSIGFTLMGMPQPPGR 67

Query: 68  IVEGQVLYYRDDGSVVDLLKLSEEEIRK-IRGNEIAYIFQDPHASLDPLYTVGYQIAEAM 126
           IV G +   + DG   +++ L E+ +R+ IR  +I+ IFQ    +L+P+YTVGYQ+ E +
Sbjct: 68  IVGGSI---KIDGR--EIVGLPEDVLRREIRWQKISMIFQGAMNALNPVYTVGYQMIEPL 122

Query: 127 EVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGISNNPRIL 186
             H K    ++ + +A+  L+ V + DP   V  YPHELSGGMKQRVVI + +   P I+
Sbjct: 123 IYH-KGMDREDALDRAMKYLELVGL-DP-EIVYRYPHELSGGMKQRVVIAMALLLEPDIV 179

Query: 187 IADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYAGKIVEI 246
           IADEPTTALDV +QAQI++L+ ++K+K   ++I ITH+L ++AE +DRVAVMYAGK+VEI
Sbjct: 180 IADEPTTALDVVVQAQIINLMKRLKKKLGLSMIFITHDLSILAEISDRVAVMYAGKLVEI 239

Query: 247 GTVDQIFKNPLHPYTQGLLRAVPNPLTKIEKLEAIPGTVPNLITPPGGCRFHPRCPKVMS 306
           G  ++I+  P HPYTQ LL A+P     +EKLE IPG+ PNLI PP GCRFHPRCP  M 
Sbjct: 240 GPSEKIYYEPAHPYTQKLLAAIPRLHEDVEKLEFIPGSPPNLINPPSGCRFHPRCPYAMD 299

Query: 307 ICKEKVPELKEIEPGHFVACHL 328
            CKE+ P++ E++  H+ AC L
Sbjct: 300 KCKEEEPKMVEVDKDHYAACWL 321


>dbj|BAB07365.1| (AP001519) oligopeptide ABC transporter (ATP-binding protein)
           [Bacillus halodurans]
           Length = 329
           
 Score =  299 bits (758), Expect = 3e-80
 Identities = 153/327 (46%), Positives = 225/327 (68%), Gaps = 7/327 (2%)

Query: 4   VPEPILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIE 63
           +P+ +L++  L  HF+T  G V A++ VS  +++GE   +VGE+GCGKSVTS +I QL+ 
Sbjct: 1   MPDVVLELDKLRTHFFTDQGEVPAVDGVSLRLHQGEIIGIVGESGCGKSVTSLSIMQLVP 60

Query: 64  SP-GRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQI 122
           +P G+I+ G V Y++ +    DL+++S + +++IRGN+IA IFQ+P  SL+PL+T+G Q+
Sbjct: 61  NPPGKIMSGHV-YFKGE----DLVQVSPKRMKQIRGNDIAMIFQEPMTSLNPLFTIGNQL 115

Query: 123 AEAMEVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGISNN 182
            EA+  H K+   +E  ++AV +L+ V IP      + YPH+LSGGM+QRV+I + +  +
Sbjct: 116 IEAIRNHRKMTK-QEARKQAVTMLERVGIPRADEIASEYPHQLSGGMRQRVMIAMAMCCD 174

Query: 183 PRILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYAGK 242
           P++LIADEPTTALDVTIQAQILDL+  + E +   ++LITH+LGVVAE  +RV VMYAG+
Sbjct: 175 PKVLIADEPTTALDVTIQAQILDLMRHLNEAHDTAILLITHDLGVVAELCNRVVVMYAGQ 234

Query: 243 IVEIGTVDQIFKNPLHPYTQGLLRAVPNPLTKIEKLEAIPGTVPNLITPPGGCRFHPRCP 302
           +VE G V  I K+P HPYT+GLL+++P    + ++L +IPG VP   T   GCRF  RC 
Sbjct: 235 VVEEGDVRMILKHPKHPYTKGLLKSLPKIHEQSKRLYSIPGVVPKPGTVGHGCRFAARCE 294

Query: 303 KVMSICKEKVPELKEIEPGHFVACHLY 329
                CK   P+L+++  GH   C LY
Sbjct: 295 VAFERCKTTAPQLQQVATGHQCRCFLY 321


>pir||G75026 oligopeptide transport ATP-binding protein appd. PAB1196 -
           Pyrococcus abyssi (strain Orsay)
           >gi|5459167|emb|CAB50653.1| (AJ248288) OLIGOPEPTIDE
           TRANSPORT ATP-BINDING PROTEIN APPD. [Pyrococcus abyssi]
           Length = 319
           
 Score =  299 bits (757), Expect = 3e-80
 Identities = 154/322 (47%), Positives = 222/322 (68%), Gaps = 9/322 (2%)

Query: 8   ILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIESPGR 67
           IL+V+NL ++++T  G VKA++ V+FD+ KGE   L GE+GCGKS     +  + + PGR
Sbjct: 5   ILEVKNLKMYYFTSRGPVKAVDDVTFDLEKGEVLGLAGESGCGKSSIGFTLMGMPQPPGR 64

Query: 68  IVEGQVLYYRDDGSVVDLLKLSEEEIRK-IRGNEIAYIFQDPHASLDPLYTVGYQIAEAM 126
           IV G +   + DG   +++ L E+ +RK IR  +I+ IFQ    +L+P+YTVGYQ+ E +
Sbjct: 65  IVSGSI---KIDGR--EIVGLPEDVLRKEIRWQKISMIFQGAMNALNPVYTVGYQMIEPL 119

Query: 127 EVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGISNNPRIL 186
             H  + S ++ + +A+  L+ V + DP   V  YPHELSGGMKQRVVI   +   P I+
Sbjct: 120 IYHRGM-SREDALDRAMKYLELVGL-DP-EIVYRYPHELSGGMKQRVVIATALILEPDIV 176

Query: 187 IADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYAGKIVEI 246
           IADEPTTALDV +QAQI++L+ ++K+K   ++I ITH+L ++AE +D++A+MYAGKIVEI
Sbjct: 177 IADEPTTALDVVVQAQIINLMKRLKKKLGLSMIFITHDLSILAEISDKIAIMYAGKIVEI 236

Query: 247 GTVDQIFKNPLHPYTQGLLRAVPNPLTKIEKLEAIPGTVPNLITPPGGCRFHPRCPKVMS 306
           G  ++++  P HPYTQ LL A+P     +EKLE IPG+ PNL+ PP GCRFHPRCP  M 
Sbjct: 237 GPSEKVYYEPAHPYTQKLLAAIPRLHEDVEKLEFIPGSPPNLLNPPSGCRFHPRCPYAMD 296

Query: 307 ICKEKVPELKEIEPGHFVACHL 328
            CKE+ P++ E++  H+ AC L
Sbjct: 297 RCKEEEPKMVEVDKDHYAACWL 318


>sp|P42064|APPD_BACSU OLIGOPEPTIDE TRANSPORT ATP-BINDING PROTEIN APPD
           >gi|2119773|pir||I40543 oligopeptide transport
           ATP-binding protein appD - Bacillus subtilis
           >gi|677943|gb|AAA62356.1| (U20909) AppD [Bacillus
           subtilis] >gi|2633490|emb|CAB12993.1| (Z99110)
           oligopeptide ABC transporter (ATP-binding protein)
           [Bacillus subtilis]
           Length = 328
           
 Score =  298 bits (754), Expect = 8e-80
 Identities = 157/326 (48%), Positives = 216/326 (66%), Gaps = 13/326 (3%)

Query: 8   ILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIESPGR 67
           +L+V NL  +F+     + A++ V F + KGET ALVGE+G GKS+TS +I  L++S G 
Sbjct: 4   LLEVNNLKTYFFRKKEPIPAVDGVDFHISKGETVALVGESGSGKSITSLSIMGLVQSSG- 62

Query: 68  IVEGQVLYYRDDGSVV----DLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQIA 123
              G+++    DGS+     DL   +E +  KIRGNE++ IFQ+P  SL+P+ T+G QI 
Sbjct: 63  ---GKIM----DGSIKLEDKDLTSFTENDYCKIRGNEVSMIFQEPMTSLNPVLTIGEQIT 115

Query: 124 EAMEVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGISNNP 183
           E +  H  +K  KE  Q+AV++L+ V      + +  YPH LSGGM+QRV+I I +S NP
Sbjct: 116 EVLIYHKNMKK-KEARQRAVELLQMVGFSRAEQIMKEYPHRLSGGMRQRVMIAIALSCNP 174

Query: 184 RILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYAGKI 243
           ++LIADEPTTALDVTIQAQ+L+L+  + +K+  +++LITH+LGVV+E ADRV VMY G++
Sbjct: 175 KLLIADEPTTALDVTIQAQVLELMKDLCQKFNTSILLITHDLGVVSEAADRVIVMYCGQV 234

Query: 244 VEIGTVDQIFKNPLHPYTQGLLRAVPNPLTKIEKLEAIPGTVPNLITPPGGCRFHPRCPK 303
           VE  TVD +F  PLHPYT+GLL ++P    +I+KL AI G+VP     P GCRF PRCPK
Sbjct: 235 VENATVDDLFLEPLHPYTEGLLTSIPVIDGEIDKLNAIKGSVPTPDNLPPGCRFAPRCPK 294

Query: 304 VMSICKEKVPELKEIEPGHFVACHLY 329
            M  C    P L   + G  V C LY
Sbjct: 295 AMDKCWTNQPSLLTHKSGRTVRCFLY 320


>pir||D72720 probable oligopeptide transport ATP-binding protein oppD APE0301 -
           Aeropyrum pernix (strain K1) >gi|5103940|dbj|BAA79256.1|
           (AP000059) 282aa long hypothetical oligopeptide
           transport ATP-binding protein oppD [Aeropyrum pernix]
           Length = 282
           
 Score =  293 bits (743), Expect = 2e-78
 Identities = 143/285 (50%), Positives = 201/285 (70%), Gaps = 6/285 (2%)

Query: 44  VGETGCGKSVTSRAITQLIESPGRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAY 103
           +GE+GCGKS  +R+I +++ S   I +G ++     G+ VDL++LSE+E+ KIRG  ++ 
Sbjct: 1   MGESGCGKSTLARSIARILPSNAVIEKGSIILNLGSGNTVDLVRLSEDELVKIRGKIVSM 60

Query: 104 IFQDPHASLDPLYTVGYQIAEAMEVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPH 163
           IFQDP A+L P++ V  Q+ +   V G+ + +++  Q   +ILK +++P P   +  YPH
Sbjct: 61  IFQDPSAALSPVHKVKKQVTD--HVSGEKRRVEKIAQ---EILKKLMMPAPHMILEKYPH 115

Query: 164 ELSGGMKQRVVIGIGISNNPRILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITH 223
           ELSGGMKQR+VI   +   PRI+IADEPTTALDVT+QAQIL +L++++E+ + T+ILITH
Sbjct: 116 ELSGGMKQRIVIAASLITRPRIIIADEPTTALDVTVQAQILKMLSRLREELETTIILITH 175

Query: 224 NLGVVAETADRVAVMYAGKIVEIGTVDQIFKNPLHPYTQGLLRAVPNPLTKIEKLEAIPG 283
           NL V AE ADR+AVMYAG +VE+  V  +F+ PLHPYT+GLL+++P P    E++E I G
Sbjct: 176 NLAVAAEIADRIAVMYAGHVVEVADVFSLFERPLHPYTKGLLKSIPKPHVD-EEIEPIRG 234

Query: 284 TVPNLITPPGGCRFHPRCPKVMSICKEKVPELKEIEPGHFVACHL 328
             P+L  PP GCRFHPRCP VM +C    P L+E  PG  VACHL
Sbjct: 235 EPPSLADPPPGCRFHPRCPYVMDVCMRIKPRLEERAPGRLVACHL 279


>sp|P37314|DPPD_ECOLI DIPEPTIDE TRANSPORT ATP-BINDING PROTEIN DPPD
           >gi|2125993|pir||S61404 dipeptide transport protein dppD
           - Escherichia coli >gi|349228|gb|AAA23705.1| (L08399)
           peripheral membrane protein [Escherichia coli]
           >gi|466680|gb|AAB18519.1| (U00039) dppD [Escherichia
           coli] >gi|1789963|gb|AAC76566.1| (AE000431) putative
           ATP-binding component of dipeptide transport system
           [Escherichia coli K12]
           Length = 327
           
 Score =  293 bits (743), Expect = 2e-78
 Identities = 152/321 (47%), Positives = 214/321 (66%), Gaps = 8/321 (2%)

Query: 8   ILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIESPGR 67
           +L V  L+VHF   +   +A++++S+ V +GE   +VGE+G GKSV+S AI  LI+ PGR
Sbjct: 3   LLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGR 62

Query: 68  IVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQIAEAME 127
           ++  ++ +   D     L ++SE+E R + G E+A IFQDP  SL+P YTVG+QI EA++
Sbjct: 63  VMAEKLEFNGQD-----LQRISEKERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIK 117

Query: 128 VH-GKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGISNNPRIL 186
           VH G  KS +   Q+A+D+L  V IPDPA R++ YPH+LSGGM QRV+I + I+  P++L
Sbjct: 118 VHQGGNKSTRR--QRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQRVMIAMAIACRPKLL 175

Query: 187 IADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYAGKIVEI 246
           IADEPTTALDVTIQAQI++LL ++++K    ++LITH+L +VAE A ++ VMYAG++VE 
Sbjct: 176 IADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVET 235

Query: 247 GTVDQIFKNPLHPYTQGLLRAVPNPLTKIEKLEAIPGTVPNLITPPGGCRFHPRCPKVMS 306
           G    IF  P HPYTQ LLRA+P      E+L ++PG VP     P GC  +PRCP    
Sbjct: 236 GDAHAIFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATD 295

Query: 307 ICKEKVPELKEIEPGHFVACH 327
            C+ + P L  +  G    CH
Sbjct: 296 RCRAEEPALNMLADGRQSKCH 316


>gi|11499359 dipeptide ABC transporter, ATP-binding protein (dppD)
           [Archaeoglobus fulgidus] >gi|7445611|pir||A69471
           dipeptide ABC transporter, ATP-binding protein (dppD)
           homolog - Archaeoglobus fulgidus
           >gi|2648781|gb|AAB89480.1| (AE000980) dipeptide ABC
           transporter, ATP-binding protein (dppD) [Archaeoglobus
           fulgidus]
           Length = 313
           
 Score =  287 bits (727), Expect = 1e-76
 Identities = 153/323 (47%), Positives = 225/323 (69%), Gaps = 14/323 (4%)

Query: 8   ILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIESPGR 67
           +L + NLT  F T  G+V+A++ VS  V KGE  ++VGE+GCGKS  + ++ +LI+ PG 
Sbjct: 3   LLDIENLTTIFRTRRGVVRAVDNVSMSVEKGEFISIVGESGCGKSTLAHSVMRLIDYPGE 62

Query: 68  IVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQIAEAME 127
           I  G++++   DG  VDLL L +EE+R+IRG++I  +FQDP  SLDPL  +G QI+E + 
Sbjct: 63  ISGGKIIF---DG--VDLLSLGDEEMREIRGSKIGMVFQDPMTSLDPLEKIGDQISETIM 117

Query: 128 VHGKIKSIKEGIQKAVDILKSV-LIPDPARRVNNYPHELSGGMKQRVVIGIGISNNPRIL 186
            H  +   KE  Q A ++L+ V L P+   RV++YPH+LSGG +QRV+I + IS NP++L
Sbjct: 118 EHMDVTK-KEAWQMAREMLEKVGLQPE---RVDSYPHQLSGGQRQRVMIAMAISLNPKLL 173

Query: 187 IADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYAGKIVEI 246
           IADEPTTALDV +Q +I+DLL  MK + +A V+LITH+  + AE +DR+AVMYAG +VE+
Sbjct: 174 IADEPTTALDVIVQEKIMDLLEDMKREGRA-VMLITHDFALAAERSDRIAVMYAGWLVEL 232

Query: 247 GTVDQIFKNPLHPYTQGLLRAVPNPLTKIEKLEAIPGTVPNLITPPGGCRFHPRCPKVMS 306
           G  +++   PLHPYT+GL+++VP+ +   ++++ +PG  P+LI PP GCRF PRC +   
Sbjct: 233 GKAEKLTNEPLHPYTKGLIQSVPD-VWMDKEIKPLPGFPPDLINPPEGCRFRPRCSEASK 291

Query: 307 ICKEKVPELKEIEPGHFVACHLY 329
            C ++ PE  E++ G  V C LY
Sbjct: 292 RCMKEPPEF-EVD-GRVVKCWLY 312


>pir||T34759 oligopeptide ABC transporter ATP-binding protein - Streptomyces
           coelicolor >gi|3402246|emb|CAA20182.1| (AL031184)
           oligopeptide ABC transporter ATP-binding protein
           [Streptomyces coelicolor A3(2)]
           Length = 365
           
 Score =  287 bits (727), Expect = 1e-76
 Identities = 155/336 (46%), Positives = 222/336 (65%), Gaps = 20/336 (5%)

Query: 5   PEPILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIES 64
           P   L+VR+L VHF T  G+VK+++ +SF + KG+T  +VGE+G GKSVTS  I  L  +
Sbjct: 21  PTAFLEVRDLKVHFPTDDGLVKSVDGLSFQLEKGKTLGIVGESGSGKSVTSLGIMGL-HT 79

Query: 65  PGRI------VEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTV 118
            G+       + G++     DG+  +LL    + +RK+RG E+A IFQDP ++L P YT+
Sbjct: 80  AGQYGKRKARISGEIWL---DGT--ELLSADPDHVRKLRGREMAMIFQDPLSALHPYYTI 134

Query: 119 GYQIAEAMEVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIG 178
           G QI EA  +H K+   K   ++AV++L  V IP P +RV++YPHE SGGM+QR +I + 
Sbjct: 135 GQQIVEAYRIHHKVDK-KTAKRRAVEMLDRVGIPQPDKRVDSYPHEFSGGMRQRAMIAMS 193

Query: 179 ISNNPRILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVM 238
           + NNP +LIADEPTTALDVT+QAQILDL+  +++++ + VI+ITH+LGVVAE AD + VM
Sbjct: 194 LVNNPELLIADEPTTALDVTVQAQILDLIRDLQKEFGSAVIVITHDLGVVAELADDLLVM 253

Query: 239 YAGKIVEIGTVDQIFKNPLHPYTQGLLRAVPN-PLTKIEKLEAIPGTVPNLITPPGGCRF 297
           Y G+ VE G  +++F  P HPYT GLL ++P     + E+L  + G+ P+LI  P GC F
Sbjct: 254 YGGRCVERGPAEKVFYEPRHPYTWGLLGSMPRLDRDQQERLIPVKGSPPSLINLPSGCAF 313

Query: 298 HPRCPKVMSICKEKV-----PELKEIEPGHFVACHL 328
           +PRCP    + K+ V     PEL E+   H+ ACH+
Sbjct: 314 NPRCP-YADVPKDDVTRTVRPELTEVGSKHWAACHM 348


>dbj|BAB07359.1| (AP001519) oligopeptide ABC transporter (ATP-binding protein)
           [Bacillus halodurans]
           Length = 340
           
 Score =  287 bits (727), Expect = 1e-76
 Identities = 158/323 (48%), Positives = 204/323 (62%), Gaps = 7/323 (2%)

Query: 8   ILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIESPGR 67
           +LQ+RNLT  F        A++ V+ +V K E  A+VGE+G GKS  +  I  L      
Sbjct: 6   LLQIRNLTTAFQIKDDFYAAVDNVTLNVNKNEVLAIVGESGSGKSALANTIMGLHNPERT 65

Query: 68  IVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQIAEAME 127
            +EG++ +  ++     L+KL   ++ KIRG++++ IFQDP  +L+PL  +G QI EA+ 
Sbjct: 66  KIEGEINFKGEN-----LVKLPVSKLNKIRGDKLSMIFQDPLTALNPLMIIGEQIGEALL 120

Query: 128 VHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGISNNPRILI 187
           +H  +    E  +K +D+L  V IP P      YPHELSGGM+QRV+I   I+  P  LI
Sbjct: 121 LHRSLTKA-ERKKKVIDLLNLVGIPRPESTYEQYPHELSGGMRQRVMIAAAIACEPEFLI 179

Query: 188 ADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYAGKIVEIG 247
           ADEPTTALDVTIQAQILDL+  +KEK  A +ILITH+LGVVAE ADRVAVMYAG+IVEI 
Sbjct: 180 ADEPTTALDVTIQAQILDLIRDLKEKIHAGIILITHDLGVVAEMADRVAVMYAGQIVEIA 239

Query: 248 TVDQIFKNPLHPYTQGLLRAVPNPLTKIEKLEAIPGTVPNLIT-PPGGCRFHPRCPKVMS 306
            V  +F+ PLHPYT+ LL +VP+     EKL  I G VP L   P  GCRF  R P +  
Sbjct: 240 DVFTLFERPLHPYTRSLLNSVPSESNDQEKLHVIQGIVPALQNLPRKGCRFKDRIPWLSE 299

Query: 307 ICKEKVPELKEIEPGHFVACHLY 329
              E  PEL E+EPGHFV C  Y
Sbjct: 300 SAHEDHPELHEVEPGHFVRCTCY 322


>pir||T45280 probable ABC transporter intracellular ATPase chain bldkD
           [imported] - Streptomyces coelicolor
           >gi|1532204|gb|AAB09557.1| (U68036) putative ABC
           transporter intracellular ATPase subunit BldkD
           [Streptomyces coelicolor A3(2)]
           Length = 353
           
 Score =  286 bits (724), Expect = 3e-76
 Identities = 151/325 (46%), Positives = 214/325 (65%), Gaps = 8/325 (2%)

Query: 6   EPILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIESP 65
           +  L VR+L VHF T  G+VKA++ +SFD+ +G+T  +VGE+G GKSVT+ A+  L +  
Sbjct: 17  DAFLSVRDLKVHFSTEGGVVKAVDGLSFDLERGKTLGIVGESGSGKSVTNLAVLGLHDRR 76

Query: 66  GRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQIAEA 125
              ++G +     DG   +L   SE+++ K+RG ++A IFQD   +L P YTVG QIAE 
Sbjct: 77  RTAIDGSITL---DGQ--ELTDASEKQLEKLRGKKMAMIFQDALTALSPYYTVGRQIAEP 131

Query: 126 MEVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGISNNPRI 185
              H    S K+    A+D+L+ V IP P +RV++YPH+ SGG+ QR +I + +S NP +
Sbjct: 132 FMKHNGA-SKKDARCGAIDLLQKVGIPHPQKRVDDYPHQFSGGIGQRAMIAMALSCNPDL 190

Query: 186 LIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYAGKIVE 245
           LIADEPTTALDVT+QAQILDLL  +++++ + +I+ITH+LGVV   AD + VMYAG+ VE
Sbjct: 191 LIADEPTTALDVTVQAQILDLLKDLQQEFASAIIMITHDLGVVGNMADDIMVMYAGRAVE 250

Query: 246 IGTVDQIFKNPLHPYTQGLLRAVPNPLTKI-EKLEAIPGTVPNLITPPGGCRFHPRCPKV 304
            GTV ++ K+P HPYT GLL ++PN  + + E L  IPG+ P+L+ PP GC FHPRC   
Sbjct: 251 RGTVREVLKSPQHPYTWGLLSSMPNLTSDVDEPLMPIPGSPPSLMNPPSGCAFHPRCGFT 310

Query: 305 MSICKEKVP-ELKEIEPGHFVACHL 328
             +  E+   E   +  G   ACHL
Sbjct: 311 DLVSGERCSGERPTLPHGRAAACHL 335


>gb|AAG20449.1| (AE005117) oligopeptide ABC transporter; OppD2 [Halobacterium sp.
           NRC-1]
           Length = 363
           
 Score =  283 bits (717), Expect = 2e-75
 Identities = 147/326 (45%), Positives = 211/326 (64%), Gaps = 7/326 (2%)

Query: 6   EPILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIESP 65
           E IL +RNL   F T    ++A++ +S  +  GET  +VGE+G GKSVT+R+I  L+++P
Sbjct: 16  ESILSIRNLQTVFRTDHEHIRAVDGISLSISPGETLGIVGESGSGKSVTARSIMGLVDAP 75

Query: 66  GRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQIAEA 125
           G ++    + +  DG+  +L +LS ++ +++RG+ +  IFQDP  SL+P+YTVG QI EA
Sbjct: 76  GEVLPESSIVF--DGT--ELTELSADQYQEVRGSGVGMIFQDPLKSLNPVYTVGNQIREA 131

Query: 126 MEVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGISNNPRI 185
           + ++  I   +E    A+D+L+ V IPDP RR++ YP+E SGGM+QR VI + ++ +P +
Sbjct: 132 LRINRGITG-QEATDVAIDLLEDVAIPDPERRLDEYPNEFSGGMRQRAVIAMMLACDPDV 190

Query: 186 LIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYAGKIVE 245
           LI DEPTTALDVTIQAQI++LL  ++ +    ++ ITH++GV+AE +DRV VMYAG+ VE
Sbjct: 191 LICDEPTTALDVTIQAQIVELLQDIQAERDLAILFITHDMGVIAEISDRVNVMYAGEFVE 250

Query: 246 IGTVDQIFKNPLHPYTQGLLRAVPNPLTKIEKLEAIPGTVPNLITPPGGCRFHPRCPKVM 305
              V+++F NP HPYTQGLL A+P      E+L  I G VP    P   CRF PRCPK  
Sbjct: 251 KAPVEELFANPKHPYTQGLLDAIPGTSVDDERLNTIEGDVPTPNQPATDCRFAPRCPKAF 310

Query: 306 SICKEKVPELKEIEP--GHFVACHLY 329
             C E  P    +     H  AC LY
Sbjct: 311 EDCTEVHPTHVSVSDTHDHSTACLLY 336


>sp|P45095|DPPD_HAEIN DIPEPTIDE TRANSPORT ATP-BINDING PROTEIN DPPD
           >gi|1074009|pir||F64188 dipeptide transport ATP-binding
           protein dppD - Haemophilus influenzae (strain Rd KW20)
           >gi|972897|gb|AAA95974.1| (U17295) DppD [Haemophilus
           influenzae] >gi|1574112|gb|AAC22838.1| (U32798)
           dipeptide ABC transporter, ATP-binding protein (dppD)
           [Haemophilus influenzae Rd]
           Length = 330
           
 Score =  283 bits (716), Expect = 2e-75
 Identities = 152/322 (47%), Positives = 214/322 (66%), Gaps = 11/322 (3%)

Query: 8   ILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIESPGR 67
           +L V+ L+VHF       KA++++S+ V +GE   +VGE+G GKSV+S AI  LI+ PGR
Sbjct: 3   LLDVKELSVHFGDKKTPFKAVDRISYQVAQGEVLGIVGESGSGKSVSSLAIMGLIDHPGR 62

Query: 68  IVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQIAEAME 127
            V  + L + +     DLL L  +  R++ G ++A IFQDP  SL+P YTVG+QI EA++
Sbjct: 63  -VSAESLQFEN----TDLLTLESKAKRQLIGADVAMIFQDPMTSLNPAYTVGFQIMEALK 117

Query: 128 VH--GKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGISNNPRI 185
            H  G  K+ K+   + +++LK V IPDP  R++ YPH+LSGGM QRV+I + I+  P++
Sbjct: 118 THEGGTKKARKD---RTLELLKLVGIPDPESRIDVYPHQLSGGMSQRVMIAMAIACRPKL 174

Query: 186 LIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYAGKIVE 245
           LIADEPTTALDVTIQAQI++LL ++++K   ++ILITH+L +VAE A+R+ VMYAG+IVE
Sbjct: 175 LIADEPTTALDVTIQAQIMELLLELQKKECMSLILITHDLALVAEAAERIIVMYAGQIVE 234

Query: 246 IGTVDQIFKNPLHPYTQGLLRAVPNPLTKIEKLEAIPGTVPNLITPPGGCRFHPRCPKVM 305
            GT   IF+ P HPYTQ LLR++P       +LE++ G VP     P GC  +PRCP   
Sbjct: 235 EGTAKDIFREPKHPYTQALLRSLPEFAEGKSRLESLQGVVPGKYDRPTGCLLNPRCPYAT 294

Query: 306 SICKEKVPELKEIEPGHFVACH 327
             C++  P+L  I     V CH
Sbjct: 295 EYCRQVEPQLHHI-GSRKVKCH 315


>pir||E72536 probable oligopeptide transport ATP-binding protein APE1578 -
           Aeropyrum pernix (strain K1) >gi|5105265|dbj|BAA80578.1|
           (AP000062) 324aa long hypothetical oligopeptide
           transport ATP-binding protein [Aeropyrum pernix]
           Length = 324
           
 Score =  281 bits (711), Expect = 9e-75
 Identities = 148/324 (45%), Positives = 207/324 (63%), Gaps = 9/324 (2%)

Query: 6   EPILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIESP 65
           + +L V +L  +FYT  GIVKA++ VSF + +GE   + GE+G GKS  + +I  L+  P
Sbjct: 3   QELLVVEDLKTYFYTLRGIVKAVDGVSFTLRRGEVLGIAGESGSGKSTLAWSILGLVPPP 62

Query: 66  GRIVEGQVLYYRDDGSVVDLLKLSEEEIR-KIRGNEIAYIFQDPHASLDPLYTVGYQIAE 124
           GRIV G+++    DG  +D+  +SE E+R K+R  +++ +FQ     L P+YTVG QI E
Sbjct: 63  GRIVGGRIMI---DG--MDVTSMSEAELRRKVRWKKVSMVFQGAMNVLTPVYTVGRQIEE 117

Query: 125 AMEVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGISNNPR 184
            +++H  +    E  Q+  ++L+SV +       + YPHELSGG KQRVVI + ++  P 
Sbjct: 118 VLQIHRGVGR-HEARQRVYELLESVGLHRSI--ADRYPHELSGGQKQRVVIAMALALEPD 174

Query: 185 ILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYAGKIV 244
           I+IADEPTTALDV +QAQIL+LL K+  +   ++ILITH+L V+AE A+ V +MY GKI 
Sbjct: 175 IVIADEPTTALDVVVQAQILNLLKKLAWEKNLSIILITHDLSVIAELAETVMIMYGGKIA 234

Query: 245 EIGTVDQIFKNPLHPYTQGLLRAVPNPLTKIEKLEAIPGTVPNLITPPGGCRFHPRCPKV 304
           E G  D +F  P HPYTQ LL+A+P     I++L  IPG+ P+L  PP GCRFHPRCPK 
Sbjct: 235 EYGPSDAVFTKPQHPYTQALLKAIPKLRGPIDRLAYIPGSPPDLRNPPPGCRFHPRCPKA 294

Query: 305 MSICKEKVPELKEIEPGHFVACHL 328
              C  + P L  +  GH  AC L
Sbjct: 295 FDRCSREEPPLFRVGDGHLSACWL 318


>pir||D72289 oligopeptide ABC transporter, ATP-binding protein - Thermotoga
           maritima (strain MSB8)
           >gi|4981700|gb|AAD36228.1|AE001772_7 (AE001772)
           oligopeptide ABC transporter, ATP-binding protein
           [Thermotoga maritima]
           Length = 323
           
 Score =  280 bits (710), Expect = 1e-74
 Identities = 149/326 (45%), Positives = 213/326 (64%), Gaps = 17/326 (5%)

Query: 8   ILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIESPGR 67
           +L+++N++V + T    V A+E VSF + KGET  LVGE+GCGKS    +I +L+    +
Sbjct: 3   VLELKNVSVRYKTGEKTVNAVENVSFHLEKGETLGLVGESGCGKSTLGFSIMRLLPKGTK 62

Query: 68  IVEGQVLYYRDDGSV----VDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQIA 123
           I          DGS+    +D+  LS+EE+R+IRG+++A IFQDP  SL+P+  +     
Sbjct: 63  I----------DGSIKIEGIDISSLSDEEMRQIRGSKVAMIFQDPMTSLNPILRIEDHFV 112

Query: 124 EAMEVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGISNNP 183
           E +  H    S ++  + A   L+ V I     R+ +YP + SGGM+QRV+I + I  NP
Sbjct: 113 EMILTHRPELSKEDARELAAKALEDVGIN--RNRLKDYPFQFSGGMRQRVMIALSIVLNP 170

Query: 184 RILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYAGKI 243
            +LIADEPTT+LDV +QAQI++LL K+ ++++  +ILITH++G+VAE ADR+ VMYAG +
Sbjct: 171 AVLIADEPTTSLDVIVQAQIMELLEKLTKEHRTAMILITHDMGLVAEAADRIGVMYAGHL 230

Query: 244 VEIGTVDQIFKNPLHPYTQGLLRAVPNPLTKIEKLEAIPGTVPNLITPPGGCRFHPRCPK 303
           VE+ + ++IF NPLHPYT GLLR++PN     ++L  IPG+ P+L  PP GCRF PRC K
Sbjct: 231 VELASKERIFTNPLHPYTVGLLRSIPNTDVNDKELRYIPGSPPDLSNPPEGCRFAPRCEK 290

Query: 304 VMSICKEKVPELKEIEPGHFVACHLY 329
            M IC EK P   EI+ G  V C LY
Sbjct: 291 AMKICWEKEPPEFEID-GTRVKCWLY 315


>pir||E82242 oligopeptide ABC transporter, ATP-binding protein VC1094 [imported]
           - Vibrio cholerae (group O1 strain N16961)
           >gi|9655563|gb|AAF94253.1| (AE004190) oligopeptide ABC
           transporter, ATP-binding protein [Vibrio cholerae]
           Length = 324
           
 Score =  269 bits (681), Expect = 3e-71
 Identities = 140/308 (45%), Positives = 201/308 (64%), Gaps = 7/308 (2%)

Query: 8   ILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIESPGR 67
           +L V++L V F T  GIV A+  ++F + +GET  +VGE+G GKS T  AI  L+   G+
Sbjct: 4   LLDVKDLRVEFSTQDGIVTAVNDLNFSLKQGETLGIVGESGSGKSQTVFAIMGLLAKNGK 63

Query: 68  IVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQIAEAME 127
           I        + +G   ++L L E E+ K+R  +IA IFQDP  SL+P   V  Q+ E + 
Sbjct: 64  ITGSA----KFEGK--EILNLPERELNKVRAEQIAMIFQDPMTSLNPYMKVSDQLMEVLM 117

Query: 128 VHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGISNNPRILI 187
           +H K     E  +++V +L++V IP+  +R+  YPHE SGGM+QRV+I + +   P++LI
Sbjct: 118 LH-KGMGKAEAFEESVRMLEAVKIPEARKRITMYPHEFSGGMRQRVMIAMALLCRPKLLI 176

Query: 188 ADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYAGKIVEIG 247
           ADEPTTALDVT+QAQI++LLN++K ++   +I+ITH+LGVVA + D+V VMYAG+ +E G
Sbjct: 177 ADEPTTALDVTVQAQIMELLNELKREFNTAIIMITHDLGVVAGSCDKVLVMYAGRTMEYG 236

Query: 248 TVDQIFKNPLHPYTQGLLRAVPNPLTKIEKLEAIPGTVPNLITPPGGCRFHPRCPKVMSI 307
           +V+ IF NP HPY +GLL A+P   T+ E L  IPG  PNL+  P GC +  RC +V   
Sbjct: 237 SVNDIFYNPSHPYAEGLLSAIPRLDTEGEVLPTIPGNPPNLLRLPVGCPYQERCHRVTDR 296

Query: 308 CKEKVPEL 315
           CK + P L
Sbjct: 297 CKREAPIL 304


>dbj|BAA14778.1| (D90763) Oligopeptide transport ATP-binding protein OppD.
           [Escherichia coli] >gi|1805527|dbj|BAA16041.1| (D90852)
           Oligopeptide transport ATP-binding protein OppD.
           [Escherichia coli]
           Length = 337
           
 Score =  268 bits (679), Expect = 5e-71
 Identities = 142/321 (44%), Positives = 200/321 (62%), Gaps = 8/321 (2%)

Query: 6   EPILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIESP 65
           + +L V++L V F T  G V A+  ++F +  GET  +VGE+G GKS T+ A+  L+ + 
Sbjct: 17  DALLNVKDLRVTFSTPDGDVTAVNDLNFSLRAGETLGIVGESGSGKSQTAFALMGLLAAN 76

Query: 66  GRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQIAEA 125
           GRI        R+      +L L E E+ K+R  +I+ IFQDP  SL+P   VG Q+ E 
Sbjct: 77  GRIGGSATFNGRE------ILNLPEHELNKLRAEQISMIFQDPMTSLNPYMRVGEQLMEV 130

Query: 126 MEVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGISNNPRI 185
           + +H K  S  E  +++V +L +V +P+  +R+  YPHE SGGM+QRV+I + +   P++
Sbjct: 131 LMLH-KNMSKAEAFEESVRMLDAVKMPEARKRMKMYPHEFSGGMRQRVMIAMALLCRPKL 189

Query: 186 LIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYAGKIVE 245
           LIADEPTTALDVT+QAQI+ LLN++K ++   +I+ITH+L VVA   D+V VMYAG+ +E
Sbjct: 190 LIADEPTTALDVTVQAQIMTLLNELKREFNTAIIMITHDLVVVAGICDKVLVMYAGRTME 249

Query: 246 IGTVDQIFKNPLHPYTQGLLRAVPNPLTKIEKLEAIPGTVPNLITPPGGCRFHPRCPKVM 305
            G    +F  P+HPY+ GLL AVP    + E +  IPG  PNL+  P GC F PRCP  M
Sbjct: 250 YGNARDVFYQPVHPYSIGLLNAVPRLDAEGETMLTIPGNPPNLLRLPKGCPFQPRCPHAM 309

Query: 306 SICKEKVPELKEIEPGHFVAC 326
            IC    P L+E  PG   AC
Sbjct: 310 EIC-SSAPPLEEFTPGRLRAC 329


>sp|P76027|OPPD_ECOLI OLIGOPEPTIDE TRANSPORT ATP-BINDING PROTEIN OPPD
           >gi|7442530|pir||A64872 oligopeptide transport
           ATP-binding protein oppD - Escherichia coli
           >gi|1787499|gb|AAC74328.1| (AE000223) homolog of
           Salmonella ATP-binding protein of oligopeptide ABC
           transport system [Escherichia coli K12]
           Length = 337
           
 Score =  268 bits (679), Expect = 5e-71
 Identities = 142/321 (44%), Positives = 200/321 (62%), Gaps = 8/321 (2%)

Query: 6   EPILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIESP 65
           + +L V++L V F T  G V A+  ++F +  GET  +VGE+G GKS T+ A+  L+ + 
Sbjct: 17  DALLNVKDLRVTFSTPDGDVTAVNDLNFSLRAGETLGIVGESGSGKSQTAFALMGLLAAN 76

Query: 66  GRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQIAEA 125
           GRI        R+      +L L E E+ K+R  +I+ IFQDP  SL+P   VG Q+ E 
Sbjct: 77  GRIGGSATFNGRE------ILNLPEHELNKLRAEQISMIFQDPMTSLNPYMRVGEQLMEV 130

Query: 126 MEVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGISNNPRI 185
           + +H K  S  E  +++V +L +V +P+  +R+  YPHE SGGM+QRV+I + +   P++
Sbjct: 131 LMLH-KNMSKAEAFEESVRMLDAVKMPEARKRMKMYPHEFSGGMRQRVMIAMALLCRPKL 189

Query: 186 LIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYAGKIVE 245
           LIADEPTTALDVT+QAQI+ LLN++K ++   +I+ITH+L VVA   D+V VMYAG+ +E
Sbjct: 190 LIADEPTTALDVTVQAQIMTLLNELKREFNTAIIMITHDLVVVAGICDKVLVMYAGRTME 249

Query: 246 IGTVDQIFKNPLHPYTQGLLRAVPNPLTKIEKLEAIPGTVPNLITPPGGCRFHPRCPKVM 305
            G    +F  P+HPY+ GLL AVP    + E +  IPG  PNL+  P GC F PRCP  M
Sbjct: 250 YGNARDVFYQPVHPYSIGLLNAVPRLDAEGETMLTIPGNPPNLLRLPKGCPFQPRCPHAM 309

Query: 306 SICKEKVPELKEIEPGHFVAC 326
            IC    P L+E  PG   AC
Sbjct: 310 EIC-SSAPPLEEFTPGRLRAC 329


>dbj|BAB07364.1| (AP001519) oligopeptide ABC transporter (ATP-binding protein)
           [Bacillus halodurans]
           Length = 322
           
 Score =  268 bits (677), Expect = 8e-71
 Identities = 149/334 (44%), Positives = 216/334 (64%), Gaps = 25/334 (7%)

Query: 6   EPILQVRNLTVHFYTYAGI-------VKAIEKVSFDVYKGETFALVGETGCGKSVTSRAI 58
           +P+L+V+NLT  F    G        V+A++ +SF VY+GE   +VGE+GCGKS T +AI
Sbjct: 3   KPLLEVKNLTKSFDINGGFFSRKVGEVRAVDNLSFSVYEGEVLGIVGESGCGKSTTGKAI 62

Query: 59  TQLIESPGRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTV 118
            +LIE       G+V +     +  ++  LSE ++RK R  ++  IFQDP+ASL+P +T+
Sbjct: 63  LRLIEPSS----GEVYF-----AGTEITALSEGDMRK-RRRDMQIIFQDPYASLNPRHTI 112

Query: 119 GYQIAEAMEVHGKIKSIKEGIQKAVDILKSV-LIPDPARRVNNYPHELSGGMKQRVVIGI 177
              I E + VH +I + KE +++  ++L++V L  D A R   YPH+ SGG +QR+ I  
Sbjct: 113 EKIIREPLIVH-QIGTKKEQLERVEELLETVGLSSDHATR---YPHQFSGGQRQRIGIAR 168

Query: 178 GISNNPRILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAV 237
            ++ +P+++I DEP +ALDV++Q+QIL+L+  +KE +  T I I H+L VV   +DRVAV
Sbjct: 169 ALAVHPKLVICDEPVSALDVSVQSQILNLMADLKETFALTYIFIAHDLSVVKHISDRVAV 228

Query: 238 MYAGKIVEIGTVDQIFKNPLHPYTQGLLRA--VPNPLTKIEKLEAIPGTVPNLITPPGGC 295
           MY G++VE+ T DQ+F+NP HPYT+ LL A  VP+P    EK+  + G VP+   PP GC
Sbjct: 229 MYLGRMVEMATKDQLFENPKHPYTRALLSAVPVPDPDAAKEKI-LLKGDVPSPSNPPEGC 287

Query: 296 RFHPRCPKVMSICKEKVPELKEIEPGHFVACHLY 329
            FH RCP  M +CK K P L E E GH+VACHLY
Sbjct: 288 AFHTRCPDCMDVCKIKRPSLHEKEKGHYVACHLY 321


>sp|P04285|OPPD_SALTY OLIGOPEPTIDE TRANSPORT ATP-BINDING PROTEIN OPPD
           >gi|47805|emb|CAA29042.1| (X05491) Opp D (AA1-335)
           [Salmonella typhimurium]
           Length = 335
           
 Score =  266 bits (673), Expect = 2e-70
 Identities = 142/327 (43%), Positives = 203/327 (61%), Gaps = 11/327 (3%)

Query: 3   KVPEP---ILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAIT 59
           + P+P   +L+V +L V F T  G V A+  ++F +  GET  +VGE+G GKS T+ A+ 
Sbjct: 9   QAPQPANVLLEVNDLRVTFATPDGDVTAVNDLNFTLRAGETLGIVGESGSGKSQTAFALM 68

Query: 60  QLIESPGRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVG 119
            L+ + GRI        R+      +L L E E+  +R  +I+ IFQDP  SL+P   VG
Sbjct: 69  GLLATNGRIGGSATFNGRE------ILNLPERELNTLRAEQISMIFQDPMTSLNPYMRVG 122

Query: 120 YQIAEAMEVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGI 179
            Q+ E + +H K  S  E  +++V +L +V +P+  +R+  YPHE SGGM+QRV+I + +
Sbjct: 123 EQLMEVLMLH-KGMSKAEAFEESVRMLDAVKMPEARKRMKMYPHEFSGGMRQRVMIAMAL 181

Query: 180 SNNPRILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMY 239
              P++LIADEPTTALDVT+QAQI+ LLN++K ++   +I+ITH+LGVVA   D+V VMY
Sbjct: 182 LCRPKLLIADEPTTALDVTVQAQIMTLLNELKREFNTAIIMITHDLGVVAGICDKVLVMY 241

Query: 240 AGKIVEIGTVDQIFKNPLHPYTQGLLRAVPNPLTKIEKLEAIPGTVPNLITPPGGCRFHP 299
           AG+ +E G    +F  P+HPY+ GLL AVP   ++  ++  IPG  PNL+  P GC F P
Sbjct: 242 AGRTMEYGKARDVFYQPVHPYSIGLLNAVPRLDSEGAEMLTIPGNPPNLLRLPKGCPFQP 301

Query: 300 RCPKVMSICKEKVPELKEIEPGHFVAC 326
           RCP  M IC    P L+   PG   AC
Sbjct: 302 RCPHAMEIC-NNAPPLEAFSPGRLRAC 327


>pir||E83082 probable ATP-binding component of ABC transporter PA4505 [imported]
           - Pseudomonas aeruginosa (strain PAO1)
           >gi|9950745|gb|AAG07893.1|AE004864_5 (AE004864) probable
           ATP-binding component of ABC transporter [Pseudomonas
           aeruginosa]
           Length = 324
           
 Score =  265 bits (670), Expect = 5e-70
 Identities = 143/314 (45%), Positives = 199/314 (62%), Gaps = 7/314 (2%)

Query: 8   ILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIESPGR 67
           +L ++NL+V F      V  ++ +   V KGE  A+VGE+G GKSVT  A+  LI++PG 
Sbjct: 3   LLDIKNLSVRFGDTTA-VPVVDGLDLSVDKGEVLAIVGESGSGKSVTMMALMGLIDAPGW 61

Query: 68  IVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQIAEAME 127
           +    +   R DG   D+L L   + R+I G ++A +FQDP  +L+P YTVGYQI E + 
Sbjct: 62  VSADHL---RFDGH--DMLTLKGRQRRRIVGKDMAMVFQDPMTALNPSYTVGYQIEEVLR 116

Query: 128 VHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGISNNPRILI 187
           +H  ++  K   Q+A+++L+ V IP  A R++ YPH+LSGGM QRV I + I+  P++LI
Sbjct: 117 LHLGLRG-KALRQRALELLERVEIPAAASRLDAYPHQLSGGMSQRVAIAMAIAAEPKLLI 175

Query: 188 ADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYAGKIVEIG 247
           ADEPTTALDVTIQAQI++LL  ++      +ILITH+L VVAETA RV VMYAG+ VEIG
Sbjct: 176 ADEPTTALDVTIQAQIMELLLNLQRDQDMALILITHDLAVVAETAQRVCVMYAGEAVEIG 235

Query: 248 TVDQIFKNPLHPYTQGLLRAVPNPLTKIEKLEAIPGTVPNLITPPGGCRFHPRCPKVMSI 307
            V  +F  P HPYT+ L++A+P       +L  +PG VP     P GC   PRCP     
Sbjct: 236 GVPALFDRPTHPYTEALIKAIPEHCAGEARLATLPGIVPGRYDRPRGCLLSPRCPYAQEH 295

Query: 308 CKEKVPELKEIEPG 321
           C+++ P L+  E G
Sbjct: 296 CRQERPALETHERG 309


>pir||G72283 oligopeptide ABC transporter, ATP-binding protein - Thermotoga
           maritima (strain MSB8)
           >gi|4981745|gb|AAD36269.1|AE001776_5 (AE001776)
           oligopeptide ABC transporter, ATP-binding protein
           [Thermotoga maritima]
           Length = 326
           
 Score =  264 bits (667), Expect = 1e-69
 Identities = 139/327 (42%), Positives = 207/327 (62%), Gaps = 9/327 (2%)

Query: 6   EPILQVRNLTVHF----YTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQL 61
           E ++  +NL  ++    +    +VKA++ VS D+   E + + GE+GCGKS   +A+  L
Sbjct: 2   ETLISGKNLKAYYVLDLWGSKKVVKAVDNVSLDILPNEIYGIAGESGCGKSTLLKALLAL 61

Query: 62  IESPGRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQ 121
           ++ P R+++G++LY   +G   ++  L  E IRK+R + I+YI Q     L+P+  V   
Sbjct: 62  LDPPLRLMDGELLY-NIEGRPTNVTLLKSETIRKLRWSFISYIPQGSMHVLNPVKRVRDT 120

Query: 122 IAEAMEVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGISN 181
             E +  H K K  KE +  AV  LK + +P+  R +N +PH+LSGGM+QRV I +    
Sbjct: 121 FIEILSSHVK-KQTKEFLDLAVQHLKDLGLPE--RVLNMFPHQLSGGMRQRVTIALATVL 177

Query: 182 NPRILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYAG 241
            PR++ ADEPTTALDV  Q  ++ L+ K++   K TV+L+TH++GV A+   R+A+MYAG
Sbjct: 178 KPRVIFADEPTTALDVVAQRAVMQLIRKIQNDLKNTVVLVTHDMGVHAQITTRMAIMYAG 237

Query: 242 KIVEIGTVDQIFKNPLHPYTQGLLRAVPNPLTKIEKLEAIPGTVPNLITPPGGCRFHPRC 301
           KIVE G   +IFKNPLHPYT+ L++++P  +   +    IPG+ P+L+ PP GCRFHPRC
Sbjct: 238 KIVEEGPTLEIFKNPLHPYTRYLIQSLP-AIGDKKLRSGIPGSPPSLVAPPPGCRFHPRC 296

Query: 302 PKVMSICKEKVPELKEIEPGHFVACHL 328
           P     C+E+ P LKEI+PGH VAC L
Sbjct: 297 PHASQRCREEEPLLKEIKPGHKVACFL 323


>pir||G71014 probable dipeptide transport ATP-binding protein dppF - Pyrococcus
           horikoshii >gi|3257836|dbj|BAA30519.1| (AP000006) 329aa
           long hypothetical dipeptide transport ATP-binding
           protein dppF [Pyrococcus horikoshii]
           Length = 329
           
 Score =  263 bits (664), Expect = 3e-69
 Identities = 142/347 (40%), Positives = 211/347 (59%), Gaps = 39/347 (11%)

Query: 1   MRKVPEPILQVRNLTVHF-----YTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTS 55
           M  +PEP+L+V NL  +F         G VKA++ VSF++YKGETF LVGE+GCGK+ T 
Sbjct: 1   MMFMPEPVLKVENLKKYFPVRGLLRTVGWVKAVDGVSFEIYKGETFGLVGESGCGKTTTG 60

Query: 56  RAITQLIESPGRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAY-------IFQDP 108
           R I +LIE      +G++++   D             + K++GNE+ +       +FQDP
Sbjct: 61  RTILRLIEP----TDGRIIFMGKD-------------VTKLKGNELKWFRRKAQIMFQDP 103

Query: 109 HASLDPLYTVGYQIAEAMEVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGG 168
           ++SLDP  TV   I E +  HG    + +  +  + +L+SV + +    +  YPHE SGG
Sbjct: 104 YSSLDPRQTVFQIIMEPVRFHGI--QVDDPEEFVIKLLESVGLNE--MHLYRYPHEFSGG 159

Query: 169 MKQRVVIGIGISNNPRILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVV 228
            +QR+ +   ++  P  ++ DEPT+ALDV++QA IL+ L +++EK+  T + I+H+LGVV
Sbjct: 160 QRQRIALARLLALKPEFIVLDEPTSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVV 219

Query: 229 AETADRVAVMYAGKIVEIGTVDQIFKNPLHPYTQGLLRAVPNPLTKI-----EKLEAIPG 283
              +DR+ VMY GK+VE+G  D++F+NPLHPYTQ L  A+P P   I     +K   + G
Sbjct: 220 KYMSDRIGVMYLGKLVEVGPADKVFENPLHPYTQMLFSAIPIPDPDIAREMKKKRMKVTG 279

Query: 284 TVPNLITPPGGCRFHPRCPKVMS-ICKEKVPELKEIEPGHFVACHLY 329
             P+ + PP GCRFHPRCP   + +C +K P L E+E  H+VAC LY
Sbjct: 280 EPPSPVNPPKGCRFHPRCPYAKAGLCDKKEPPLVEVEKDHYVACWLY 326


>gb|AAK42736.1| Dipeptide ABC transporter ATP binding protein (dppD-3) [Sulfolobus
           solfataricus]
           Length = 324
           
 Score =  263 bits (664), Expect = 3e-69
 Identities = 134/326 (41%), Positives = 212/326 (64%), Gaps = 12/326 (3%)

Query: 8   ILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIESPGR 67
           +LQ+RNL V++ T    VK +  V+ DV KGE   +VGE+G GKS    AI++++    R
Sbjct: 6   VLQIRNLNVYYNTLISWVKVLSDVNLDVEKGEIVGVVGESGSGKSTLGHAISRILPPNAR 65

Query: 68  IVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQIAEAME 127
           I +G ++    DG  V+L KL + E++K RG  +  IFQ+P  SL+P+  VG Q+ EA++
Sbjct: 66  I-QGDIIV---DG--VNLAKLKDSELQKYRGTWVFMIFQNPLNSLNPVKKVGSQLLEAVK 119

Query: 128 VH----GKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGISNNP 183
           +     GK    +  ++  +++LK + +PDP   ++ YPH+LSGG  QR+VI + +   P
Sbjct: 120 IRYQREGKKAEEESLMRDVIEVLKDLRLPDPYSIIDRYPHQLSGGQVQRIVISMALLLKP 179

Query: 184 RILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYAGKI 243
           ++LIADEPT+ALDVTIQAQ+++L  ++ ++   +++ ITH++ +    +DR+ VMYAG+I
Sbjct: 180 KLLIADEPTSALDVTIQAQVVNLFKQLNKEINTSILFITHDISLAYVVSDRIVVMYAGRI 239

Query: 244 VEIGTVDQIFKNPLHPYTQGLLRAVPNPLTKIEKLEAIPGTVPNLITPPGGCRFHPRCPK 303
           +E G V+++ K+P+HPYTQGL+ ++P+   K +KL AIPG  P+    P GC+F  RC K
Sbjct: 240 MEDGKVEEVLKSPMHPYTQGLVASIPSG-DKNQKLTAIPGNPPSFFALPTGCKFSNRCSK 298

Query: 304 VMSICKEKVPELKEIEPGHFVACHLY 329
           V  IC++K P + E + G  + C LY
Sbjct: 299 VFDICRKKEPSIIE-KNGRKIRCWLY 323


>pir||B72424 oligopeptide ABC transporter, ATP-binding protein - Thermotoga
           maritima (strain MSB8)
           >gi|4980543|gb|AAD35151.1|AE001692_8 (AE001692)
           oligopeptide ABC transporter, ATP-binding protein
           [Thermotoga maritima]
           Length = 338
           
 Score =  262 bits (662), Expect = 5e-69
 Identities = 143/315 (45%), Positives = 207/315 (65%), Gaps = 15/315 (4%)

Query: 18  FYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIESPGRIVEGQVLYYR 77
           F    G V+A++ VSFD+ +GET ALVGE+GCGK+ T+++I + I+      +G V+ + 
Sbjct: 20  FKKVVGYVRAVDDVSFDIKQGETLALVGESGCGKTTTAKSILRAIDP----TDGDVILHL 75

Query: 78  DDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQIAEAMEVHGKIKSIKE 137
           D G  V++ KLS +E++  R   +  IFQ+P+ SL+P   V   + E + V+G  K  KE
Sbjct: 76  D-GKDVNIAKLSRDELKPYR-RYMQMIFQNPYTSLNPRMKVKEIVGEPLLVNGIAKG-KE 132

Query: 138 GIQKAVDILKSV-LIPDPARRVNNYPHELSGGMKQRVVIGIGISNNPRILIADEPTTALD 196
              +  ++LK+V L P+   R   YPH  SGG +QR+VI   I+  P++++ DEPT+ALD
Sbjct: 133 LEDRVAELLKAVGLRPEYMIR---YPHAFSGGQRQRIVIARAIALRPKLVVCDEPTSALD 189

Query: 197 VTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYAGKIVEIGTVDQIFKNP 256
           V+I+AQIL+LL  ++E++  T + ITH+L VV   +DRVAVMY GKIVE+ + ++IF+NP
Sbjct: 190 VSIRAQILNLLMDLQEEFALTYLFITHDLSVVEHISDRVAVMYLGKIVELSSTEEIFENP 249

Query: 257 LHPYTQGLLRAVPNPLTKI-EKLEAIPGTVPNLITPPGGCRFHPRCPKVMSICKEKVPEL 315
            HPYT+ LLR+VP P   + E+L  I G VPN   PP GC FHPRCP   SICKE+ PE 
Sbjct: 250 KHPYTETLLRSVPKPDPDLREELVPIEGEVPNPANPPSGCYFHPRCPYAKSICKEEYPEF 309

Query: 316 KEI---EPGHFVACH 327
           + +   +  H+VACH
Sbjct: 310 RNLGTEDNPHYVACH 324


>emb|CAA61525.1| (X89237) oligopeptidepermease [Streptococcus pyogenes]
           Length = 356
           
 Score =  261 bits (661), Expect = 6e-69
 Identities = 146/323 (45%), Positives = 202/323 (62%), Gaps = 5/323 (1%)

Query: 1   MRKVPEPILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQ 60
           M K    IL  +++ V F     ++ AI  VS ++ +GE  A VGE+G GKSV ++  T 
Sbjct: 1   MTKENNVILTAKDVVVEFDVRDRVLTAIRNVSLELVEGEVLAFVGESGSGKSVLTKTFTG 60

Query: 61  LIESPGRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGY 120
           ++ES GRI  G ++Y   +  + DL   + +E  KIRG++IA IFQDP  SL P+ T+G 
Sbjct: 61  MLESNGRIANGSIVYRGQE--LTDLK--TNKEWAKIRGSKIATIFQDPMTSLSPIKTIGS 116

Query: 121 QIAEAMEVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGIS 180
           QI E +  H K+   K   + A+D +  V IP+  +R  +YP E SGGM+QR+VI I ++
Sbjct: 117 QITEVIIKHQKVSHAKAK-EMALDYMNKVGIPNAKKRFEDYPFEYSGGMRQRIVIAIALA 175

Query: 181 NNPRILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYA 240
             P ILI DEPTTALDVTIQAQI++LL  ++ +Y  T+I ITH+LGVVA  AD+VAVMYA
Sbjct: 176 CRPDILICDEPTTALDVTIQAQIVELLKSLQREYHFTIIFITHDLGVVASIADKVAVMYA 235

Query: 241 GKIVEIGTVDQIFKNPLHPYTQGLLRAVPNPLTKIEKLEAIPGTVPNLITPPGGCRFHPR 300
           G+IVE GTV++IF +P HPYT  LL ++P    +  +L AIPGT P+L +P  G  F  R
Sbjct: 236 GEIVEFGTVEEIFYDPRHPYTWSLLSSLPQLADESGELYAIPGTPPSLYSPIIGDAFALR 295

Query: 301 CPKVMSICKEKVPELKEIEPGHF 323
               M +  EK P    +   H+
Sbjct: 296 SEYAMVLDFEKAPPAINVSETHW 318


>pir||B72421 oligopeptide ABC transporter, ATP-binding protein - Thermotoga
           maritima (strain MSB8)
           >gi|4980562|gb|AAD35168.1|AE001694_4 (AE001694)
           oligopeptide ABC transporter, ATP-binding protein
           [Thermotoga maritima]
           Length = 332
           
 Score =  261 bits (661), Expect = 6e-69
 Identities = 135/325 (41%), Positives = 208/325 (63%), Gaps = 8/325 (2%)

Query: 8   ILQVRNLTVHF----YTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIE 63
           +L+  NL  ++    +    +VKA++ V+  + + E + + GE+GCGKS   RA+   IE
Sbjct: 3   VLRTENLKSYYILDIFGKKRVVKAVDDVNISIMENEIYGIAGESGCGKSTLLRALFAAIE 62

Query: 64  SPGRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQIA 123
            P RIV G+VLY R++G  VD+  LS+EE R++R + I+Y+ Q   + L+P+  +     
Sbjct: 63  PPQRIVGGKVLY-RENGKEVDVYSLSDEERRRLRWSFISYVPQGSMSVLNPVVKIKETFK 121

Query: 124 EAMEVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGISNNP 183
           + +E H   K+ +E  + A + +K + +P     +N YPH+LSGGM+QRV I +    +P
Sbjct: 122 DFIESHTTGKTKEEAYEMAKEHIKELGLP--IEILNAYPHQLSGGMRQRVTIALATVLSP 179

Query: 184 RILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYAGKI 243
           +++IADEPTTALDV  Q  ++ LL +++   + T+IL+TH++GV A   DR+A+MYAGKI
Sbjct: 180 KVIIADEPTTALDVVTQRGVVQLLKEIQSSRQNTIILVTHDMGVHANVTDRIAIMYAGKI 239

Query: 244 VEIGTVDQIFKNPLHPYTQGLLRAVPNPLTKIEKLEAIPGTVPNLITPPGGCRFHPRCPK 303
           +E G  ++IF+NP+HPYT+ L+ ++P    K  + E+ PG+ P+L   P GC FHPRCP 
Sbjct: 240 IEEGKTEEIFENPMHPYTKYLIYSLPKFGDK-GRRESAPGSPPSLADLPPGCSFHPRCPH 298

Query: 304 VMSICKEKVPELKEIEPGHFVACHL 328
               CK++VP LKE  PGH VAC L
Sbjct: 299 AFDRCKKEVPPLKEYLPGHRVACWL 323


>sp|P18765|AMIE_STRPN OLIGOPEPTIDE TRANSPORT ATP-BINDING PROTEIN AMIE
           >gi|98018|pir||S11152 oligopeptide transport protein
           amiE - Streptococcus pneumoniae
           >gi|47346|emb|CAA35216.1| (X17337) AmiE protein
           [Streptococcus pneumoniae]
           Length = 355
           
 Score =  260 bits (658), Expect = 1e-68
 Identities = 147/320 (45%), Positives = 198/320 (60%), Gaps = 6/320 (1%)

Query: 1   MRKVPEPILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQ 60
           M K    IL  R++ V F     ++ AI  VS ++ +GE  ALVGE+G GKSV ++    
Sbjct: 1   MTKEKNVILTARDIVVEFDVRDKVLTAIRGVSLELVEGEVLALVGESGSGKSVLTKTFRG 60

Query: 61  LIESPGRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGY 120
           ++E  GRI EG + Y   D + +     S ++  +IRG +IA IFQDP  SLDP+ T+G 
Sbjct: 61  MLEENGRIAEGSIDYRGQDLTALS----SHKDWEQIRGAKIATIFQDPMTSLDPIKTIGS 116

Query: 121 QIAEAMEVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGIS 180
           QI E +  H + K+ KE  + A+D +  V IPD  RR N YP + SGGM+QR+VI I ++
Sbjct: 117 QITEVIVKH-QGKTAKEAKELAIDYMNKVGIPDADRRFNEYPFQYSGGMRQRIVIAIALA 175

Query: 181 NNPRILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYA 240
             P +LI DEPTTALDVTIQAQI+DLL  ++ +Y  T I ITH+LGVVA  AD+VAVMYA
Sbjct: 176 CRPDVLICDEPTTALDVTIQAQIIDLLKSLQNEYHFTTIFITHDLGVVASIADKVAVMYA 235

Query: 241 GKIVEIGTVDQIFKNPLHPYTQGLLRAVPNPLTKIEKLEAIPGTVPNLITPPGGCRFHPR 300
           G+IVE GTV+++F +P HPYT  LL ++P        L +IPGT P+L T   G  F  R
Sbjct: 236 GEIVEYGTVEEVFYDPRHPYTWSLLSSLPQLADDKGDLYSIPGTPPSLYTDLKGDAFALR 295

Query: 301 CPKVMSI-CKEKVPELKEIE 319
               M I  ++K P+    E
Sbjct: 296 SDYAMQIDFEQKAPQFSVSE 315


>pir||QREBOT oligopeptide transport protein oppD - Salmonella typhimurium
           Length = 335
           
 Score =  260 bits (658), Expect = 1e-68
 Identities = 140/327 (42%), Positives = 200/327 (60%), Gaps = 11/327 (3%)

Query: 3   KVPEP---ILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAIT 59
           + P+P   +L+V +L V F T  G V A+  ++F +  GET  +VGE+G GKS +   + 
Sbjct: 9   QAPQPANVLLEVNDLRVTFATPDGDVTAVNDLNFTLRAGETLGIVGESGSGKSQSRLRLM 68

Query: 60  QLIESPGRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVG 119
            L+ + GRI        R+      +L L E E+   R  +I+ IFQDP  SL+P   VG
Sbjct: 69  GLLATNGRIGGSATFNGRE------ILNLPERELNTRRAEQISMIFQDPMTSLNPYMRVG 122

Query: 120 YQIAEAMEVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGI 179
            Q+ E + +H K  S  E  +++V +L +V +P+  +R+  YPHE SGGM+QRV+I + +
Sbjct: 123 EQLMEVLMLH-KGMSKAEAFEESVRMLDAVKMPEARKRMKMYPHEFSGGMRQRVMIAMAL 181

Query: 180 SNNPRILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMY 239
              P++LIADEPTTALDVT+QAQI+ LLN++K ++   +I+ITH+LGVVA   D+V VMY
Sbjct: 182 LCRPKLLIADEPTTALDVTVQAQIMTLLNELKREFNTAIIMITHDLGVVAGICDKVLVMY 241

Query: 240 AGKIVEIGTVDQIFKNPLHPYTQGLLRAVPNPLTKIEKLEAIPGTVPNLITPPGGCRFHP 299
           AG+ +E G    +F  P+HPY+ GLL AVP   ++  ++  IPG  PNL+  P GC F P
Sbjct: 242 AGRTMEYGKARDVFYQPVHPYSIGLLNAVPRLDSEGAEMLTIPGNPPNLLRLPKGCPFQP 301

Query: 300 RCPKVMSICKEKVPELKEIEPGHFVAC 326
           RCP  M IC    P L+   PG   AC
Sbjct: 302 RCPHAMEIC-NNAPPLEAFSPGRLRAC 327


>sp|P45052|OPPD_HAEIN OLIGOPEPTIDE TRANSPORT ATP-BINDING PROTEIN OPPD
           >gi|1075084|pir||C64184 oligopeptide transport
           ATP-binding protein oppD - Haemophilus influenzae
           (strain Rd KW20) >gi|1574676|gb|AAC22775.1| (U32792)
           oligopeptide ABC transporter, ATP-binding protein (oppD)
           [Haemophilus influenzae Rd]
           Length = 323
           
 Score =  259 bits (654), Expect = 4e-68
 Identities = 139/322 (43%), Positives = 201/322 (62%), Gaps = 8/322 (2%)

Query: 7   PILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIESPG 66
           P+L V+NL V F T  G+V A+  ++F +  G T  +VGE+G GKS T+ A+  L+ + G
Sbjct: 3   PLLDVKNLYVRFKTPDGVVTAVNDLNFTLNAGSTLGIVGESGSGKSQTAFALMGLLAANG 62

Query: 67  RIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQIAEAM 126
             VEG  ++   +G   +L+ L   E+ KIR  +I+ IFQDP  SL+P   +G Q+ E +
Sbjct: 63  E-VEGSAIF---EGK--ELVNLPNAELNKIRAEQISMIFQDPMTSLNPYMKIGEQLMEVL 116

Query: 127 EVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGISNNPRIL 186
           ++H K    +    ++V +L +V +P+  +R+  YPHE SGGM+QRV+I + +   P++L
Sbjct: 117 QLH-KGYDKQTAFAESVKMLDAVKMPEAKKRMGMYPHEFSGGMRQRVMIAMALLCRPKLL 175

Query: 187 IADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYAGKIVEI 246
           IADEPTTALDVT+QAQI+ LLN++K ++   +I+ITH+LGVVA   D+V VMYAG+ +E 
Sbjct: 176 IADEPTTALDVTVQAQIMTLLNELKREFNTAIIMITHDLGVVAGICDQVMVMYAGRTMEY 235

Query: 247 GTVDQIFKNPLHPYTQGLLRAVPNPLTKIEKLEAIPGTVPNLITPPGGCRFHPRCPKVMS 306
           GT +QIF +P HPY+ GL+ A+P      E L  IPG  PNL+  P GC F PRC     
Sbjct: 236 GTAEQIFYHPTHPYSIGLMDAIPRLDGNEEHLVTIPGNPPNLLHLPKGCPFSPRCQFATE 295

Query: 307 ICKEKVPELKEIEPGHFVACHL 328
            C +  P+L     G    C L
Sbjct: 296 QC-QIAPKLTTFNHGQLRNCWL 316


>pir||B72300 oligopeptide ABC transporter, ATP-binding protein - Thermotoga
           maritima (strain MSB8)
           >gi|4981604|gb|AAD36138.1|AE001766_4 (AE001766)
           oligopeptide ABC transporter, ATP-binding protein
           [Thermotoga maritima]
           Length = 341
           
 Score =  257 bits (649), Expect = 2e-67
 Identities = 142/334 (42%), Positives = 213/334 (63%), Gaps = 22/334 (6%)

Query: 8   ILQVRNLTVHF--------YTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAIT 59
           +L+V+NL  +F            G +KA++ +SF + +GET  LVGE+GCGK+ T++ I 
Sbjct: 3   LLEVKNLKKYFPIIKRGFRRKVVGYLKAVDGISFHIEEGETLGLVGESGCGKTTTAKLIM 62

Query: 60  QLIESPGRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNE-IAYIFQDPHASLDPLYTV 118
           + IE      EG+++   D G  VD+ KLSE+E+R+      +  IFQDP++SL+P  TV
Sbjct: 63  RGIEP----TEGEIVLNMD-GEKVDITKLSEKELREKGVRRFLQMIFQDPYSSLNPRMTV 117

Query: 119 GYQIAEAMEVHGKIKSIKEGIQKAVDILKSV-LIPDPARRVNNYPHELSGGMKQRVVIGI 177
              IAE + V+G IK  +E      D+L++V L P+  +R   YPH  SGG +QR+ I  
Sbjct: 118 RDIIAEPLVVNGVIKGKEEIDAIVSDLLRAVGLRPEYMQR---YPHAFSGGQRQRIAIAR 174

Query: 178 GISNNPRILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAV 237
            I+  P++++ DEPT+ALDV++QAQI++LL  ++++Y  T + I+H+LGVV    +RVAV
Sbjct: 175 AIALKPKLVLCDEPTSALDVSVQAQIINLLKDLQKEYNLTYLFISHDLGVVEHITNRVAV 234

Query: 238 MYAGKIVEIGTVDQIFKNPLHPYTQGLLRAVPNPLTKIEKLEA-IPGTVPNLITPPGGCR 296
           MY G+IVE+   +++F +P HPYT+ LL AVP P  K ++ +A + G VP+   PP GC 
Sbjct: 235 MYVGRIVELAETEELFSSPKHPYTEALLSAVPKPDPKRKRKKAQLTGEVPDPSNPPSGCY 294

Query: 297 FHPRCPKVMSICKEKVPELKEI---EPGHFVACH 327
           FHPRCP   +ICKE  P+L+ +   +  H VACH
Sbjct: 295 FHPRCPYAKAICKEVYPDLRNVGTDQNPHLVACH 328


>sp|Q11040|YC81_MYCTU HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PROTEIN RV1281C
           >gi|7445626|pir||A70756 probable ABC-type peptide
           transport protein - Mycobacterium tuberculosis (strain
           H37RV) >gi|1480305|emb|CAB00901.1| (Z77137) oppD
           [Mycobacterium tuberculosis]
           Length = 612
           
 Score =  256 bits (648), Expect = 2e-67
 Identities = 147/321 (45%), Positives = 200/321 (61%), Gaps = 7/321 (2%)

Query: 7   PILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIESPG 66
           P+L+V +L V F T    V A+  +S+ V  GE  A+VGE+G GKS  + A+  L+    
Sbjct: 3   PLLEVTDLAVTFRTDGDPVTAVRGISYRVEPGEVVAMVGESGSGKSAAAMAVVGLLPEYA 62

Query: 67  RIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQIAEAM 126
           + V G V   R  G+  +LL L++  + + RG  I  +FQDP ++L P+YTVG QIAEA+
Sbjct: 63  Q-VRGSV---RLQGT--ELLGLADNAMSRFRGKAIGTVFQDPMSALTPVYTVGDQIAEAI 116

Query: 127 EVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGISNNPRIL 186
           EVH      K   ++AV++L  V I  P RR   +PHELSGG +QRVVI I I+N+P +L
Sbjct: 117 EVHQPRVGKKAARRRAVELLDLVGISQPQRRSRAFPHELSGGERQRVVIAIAIANDPDLL 176

Query: 187 IADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYAGKIVEI 246
           I DEPTTALDVT+QAQILD+L   ++   A V++ITH+LGVVAE ADR  VMYAG++VE 
Sbjct: 177 ICDEPTTALDVTVQAQILDVLKAARDVTGAGVLIITHDLGVVAEFADRALVMYAGRVVES 236

Query: 247 GTVDQIFKNPLHPYTQGLLRAVPN-PLTKIEKLEAIPGTVPNLITPPGGCRFHPRCPKVM 305
             V+ ++++   PYT GLL +VP     +  +L  IPG  P+L     GC F PRCP V+
Sbjct: 237 AGVNDLYRDRRMPYTVGLLGSVPRLDAAQGTRLVPIPGAPPSLAGLAPGCPFAPRCPLVI 296

Query: 306 SICKEKVPELKEIEPGHFVAC 326
             C    PEL ++   H  AC
Sbjct: 297 DECLTAEPELLDVATDHRAAC 317


 Score =  151 bits (378), Expect = 1e-35
 Identities = 97/250 (38%), Positives = 145/250 (57%), Gaps = 16/250 (6%)

Query: 23  GIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIESPGRIVEGQVLYYRDDGSV 82
           G V+A++ +S ++ +G T  +VGE+G GKS T   I +L       +E  VL        
Sbjct: 372 GEVRAVDGISLELRQGRTLGIVGESGSGKSTTLHEILELAAPQSGSIE--VLG------- 422

Query: 83  VDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQIAEAMEVHGKIKSIKEG-IQK 141
            D+  L   E R +R  +I  +FQDP ASLDP   V   IAE ++ +G  K+     + +
Sbjct: 423 TDVATLGTAERRSLR-RDIQVVFQDPVASLDPRLPVFDLIAEPLQANGFGKNETHARVAE 481

Query: 142 AVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGISNNPRILIADEPTTALDVTIQA 201
            +DI+  +   D +R    YP E SGG KQR+ I   ++  P+IL  DEP +ALDV+IQA
Sbjct: 482 LLDIV-GLRHGDASR----YPAEFSGGQKQRIGIARALALQPKILALDEPVSALDVSIQA 536

Query: 202 QILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYAGKIVEIGTVDQIFKNPLHPYT 261
            I++LL  ++E++  + + ++H+L VV   A +VAVM AG +VE G  +++F NP H YT
Sbjct: 537 GIINLLLDLQEQFGLSYLFVSHDLSVVKHLAHQVAVMLAGTVVEQGDSEEVFGNPKHEYT 596

Query: 262 QGLLRAVPNP 271
           + LL AVP P
Sbjct: 597 RRLLGAVPQP 606


>dbj|BAA94702.1| (AB026907) dipeptide transporter DppD homolog [Ochrobactrum
           anthropi]
           Length = 334
           
 Score =  256 bits (647), Expect = 3e-67
 Identities = 136/321 (42%), Positives = 195/321 (60%), Gaps = 5/321 (1%)

Query: 7   PILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIESPG 66
           P+L V NL V F T  G V A   VS  +  GET  +VGE+G GKSV  RA+  L+ SP 
Sbjct: 5   PLLSVDNLNVTFSTPRGNVVANNGVSLQIAGGETLGIVGESGSGKSVLCRALLGLLPSPP 64

Query: 67  RIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQIAEAM 126
             +    L +       ++L L+  E+R +RG EI+ +FQ+P +SL+P++ +G QI+E +
Sbjct: 65  ATIRADRLVFAGR----NMLSLTAAEMRAVRGQEISMVFQNPMSSLNPVWPIGDQISEGL 120

Query: 127 EVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGISNNPRIL 186
            VH  I +  +    A+  L+ V IP P  RV++YPH+ SGGM QR VI + +   P++L
Sbjct: 121 RVHRGIGNA-QARSAAIAALRRVGIPSPEIRVDDYPHQWSGGMAQRAVIAMAMIGEPKLL 179

Query: 187 IADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYAGKIVEI 246
           +ADEPTTALDVTIQ QIL LL +++ +    ++L++H++ V++ET D VAVMYAG +VE 
Sbjct: 180 LADEPTTALDVTIQDQILSLLMQLQRETGMAIVLVSHDMSVISETCDNVAVMYAGGVVET 239

Query: 247 GTVDQIFKNPLHPYTQGLLRAVPNPLTKIEKLEAIPGTVPNLITPPGGCRFHPRCPKVMS 306
           G    IF+ P HPYT GLL ++P    + +KL +IPG  P+L     GC F  RC    +
Sbjct: 240 GRTTDIFRTPSHPYTAGLLNSIPPIKGRADKLASIPGQPPDLARLGPGCPFFERCSVASA 299

Query: 307 ICKEKVPELKEIEPGHFVACH 327
            C+ +   LK +  G   ACH
Sbjct: 300 ECQTRPVALKRLASGQQTACH 320


>pir||C72289 oligopeptide ABC transporter, ATP-binding protein - Thermotoga
           maritima (strain MSB8)
           >gi|4981699|gb|AAD36227.1|AE001772_6 (AE001772)
           oligopeptide ABC transporter, ATP-binding protein
           [Thermotoga maritima]
           Length = 325
           
 Score =  255 bits (644), Expect = 6e-67
 Identities = 139/333 (41%), Positives = 201/333 (59%), Gaps = 22/333 (6%)

Query: 8   ILQVRNLTVHFYTYAG-----------IVKAIEKVSFDVYKGETFALVGETGCGKSVTSR 56
           +++V+NL  +F    G            VKA++ V+F + +G++  LVGE+G GK+ T R
Sbjct: 3   LIEVQNLKKYFPVKQGPIDVLLRKPRKFVKAVDGVNFQIDEGKSLGLVGESGSGKTTTGR 62

Query: 57  AITQLIESPGRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLY 116
            I +L E      +G++++   DG   D+ KLS+EE+RK+R  E+  IFQDP ASL+P  
Sbjct: 63  VILRLEEP----TDGKIIF---DGR--DITKLSKEEMRKLR-KEMQIIFQDPMASLNPYM 112

Query: 117 TVGYQIAEAMEVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIG 176
            VG  I  A+E+HG I       +  +++L+ V +         YP ELSGG +QRVVI 
Sbjct: 113 RVGKAIEHALEIHG-IGDRSSRKEMVLEMLRRVNLEPAEDIYRRYPRELSGGQRQRVVIA 171

Query: 177 IGISNNPRILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVA 236
             +   PR+++ADE    LDV++++Q+L LL ++++++  T++ ITH+L       D +A
Sbjct: 172 RALILKPRLVVADEAVAMLDVSVRSQLLRLLQELRKEFNLTMLFITHDLATTKYVCDEIA 231

Query: 237 VMYAGKIVEIGTVDQIFKNPLHPYTQGLLRAVPNPLTKIEKLEAIPGTVPNLITPPGGCR 296
           VMY GKIVEIG  + I+ NP HPYTQ L+ AVP P  K +K     G  PN I  P GCR
Sbjct: 232 VMYLGKIVEIGDFEDIYLNPKHPYTQALISAVPEPSLKKKKKFIPEGETPNPIDVPSGCR 291

Query: 297 FHPRCPKVMSICKEKVPELKEIEPGHFVACHLY 329
           FHPRCP  M IC ++ P+LK +E  H VACHLY
Sbjct: 292 FHPRCPYRMDICMKEEPQLKAVEENHKVACHLY 324


>sp|P42065|APPF_BACSU OLIGOPEPTIDE TRANSPORT ATP-BINDING PROTEIN APPF
           >gi|2119774|pir||I40544 oligopeptide transport
           ATP-binding protein appF - Bacillus subtilis
           >gi|677944|gb|AAA62357.1| (U20909) AppF [Bacillus
           subtilis] >gi|2633491|emb|CAB12994.1| (Z99110)
           oligopeptide ABC transporter (ATP-binding protein)
           [Bacillus subtilis]
           Length = 329
           
 Score =  254 bits (642), Expect = 1e-66
 Identities = 142/336 (42%), Positives = 206/336 (61%), Gaps = 26/336 (7%)

Query: 6   EPILQVRNLTVHFYTYAGI-------VKAIEKVSFDVYKGETFALVGETGCGKSVTSRAI 58
           E IL++R++  +F   +G+       VKA++ VSF + KGET  +VGE+GCGKS   R +
Sbjct: 7   ETILELRDVKKYFPIRSGLFQRKVGDVKAVDGVSFSLKKGETLGIVGESGCGKSTAGRTM 66

Query: 59  TQLIESPGRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTV 118
            +L +      EGQ+L+   D S      LSEE++RK     I  +FQDP ASL+P  T+
Sbjct: 67  IRLYKP----TEGQILFKGQDIS-----NLSEEKLRKSVRKNIQMVFQDPFASLNPRKTL 117

Query: 119 GYQIAEAMEVHGKIKSIKEGIQKAVDILKSV-LIPDPARRVNNYPHELSGGMKQRVVIGI 177
              I E    H  + +++E  +K  ++L  V L P  A R   YPHE SGG +QR+ I  
Sbjct: 118 RSIIKEPFNTHN-MYTMRERNEKVEELLARVGLHPSFAGR---YPHEFSGGQRQRIGIAR 173

Query: 178 GISNNPRILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAV 237
            ++ NP ++IADEP +ALDV+IQ Q+++L+ +++E++  T + I+H+L VV   +DRV V
Sbjct: 174 ALTLNPELIIADEPVSALDVSIQPQVINLMEELQEEFNLTYLFISHDLSVVRHISDRVGV 233

Query: 238 MYAGKIVEIGTVDQIFKNPLHPYTQGLLRAVP----NPLTKIEKLEAIPGTVPNLITPPG 293
           MY GK++E+    +++ NPLHPYTQ LL +VP        K E++  + G +P+   PP 
Sbjct: 234 MYLGKMMELTGKHELYDNPLHPYTQALLSSVPVTRKRGSVKRERI-VLKGELPSPANPPK 292

Query: 294 GCRFHPRCPKVMSICKEKVPELKEIEPGHFVACHLY 329
           GC FH RCP    ICKE++PE KE  P HFVACHLY
Sbjct: 293 GCVFHTRCPVAKPICKEQIPEFKEAAPSHFVACHLY 328


>pir||H72366 oligopeptide ABC transporter, ATP-binding protein - Thermotoga
           maritima (strain MSB8)
           >gi|4981043|gb|AAD35615.1|AE001728_16 (AE001728)
           oligopeptide ABC transporter, ATP-binding protein
           [Thermotoga maritima]
           Length = 389
           
 Score =  254 bits (642), Expect = 1e-66
 Identities = 148/364 (40%), Positives = 210/364 (57%), Gaps = 59/364 (16%)

Query: 23  GIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIE-SPGRIV--EGQVLYY--- 76
           G VKA++ +SF V KG+TFALVGE+GCGK+ T++ I +L   + GR+V       YY   
Sbjct: 26  GYVKAVDDISFSVEKGKTFALVGESGCGKTTTAKTILRLTNPTAGRVVIDGDDTTYYFMK 85

Query: 77  -RD---------------------DGSVVDLL---------------KLSEEEIRKIRGN 99
            RD                        +VD+L               K SEE+  +I  +
Sbjct: 86  RRDAENYLETTYVDIFREMREKLSPDQIVDVLEDVDKKYAEIFFKEAKESEEKFYQILLD 145

Query: 100 EI-----------AYIFQDPHASLDPLYTVGYQIAEAMEVHGKIKSIKEGIQKAVDILKS 148
           +I             +FQDP +SL+P  TVG  + E +  HG  K+ +E +  A D+LKS
Sbjct: 146 DIDEKRMKFRRKIQIVFQDPMSSLNPRMTVGDILTEPILFHGLAKTREEAVDMAKDLLKS 205

Query: 149 VLIPDPARRVNNYPHELSGGMKQRVVIGIGISNNPRILIADEPTTALDVTIQAQILDLLN 208
           V + +    +  YPH+ SGG +QR+ I   IS NP I+I DEPT +LDV++QAQ+++L  
Sbjct: 206 VGLKE--YHLERYPHQFSGGQRQRIAIARAISINPEIVILDEPTASLDVSVQAQVINLFL 263

Query: 209 KMKEKYKATVILITHNLGVVAETADRVAVMYAGKIVEIGTVDQIFKNPLHPYTQGLLRAV 268
           K++E+   T + I+H+LG+V   +  V +MY G+IVE+G  D+IF NPLHPYTQ LL AV
Sbjct: 264 KLQEEKGFTYLFISHDLGLVRFISHEVGIMYLGRIVEMGNTDEIFDNPLHPYTQALLSAV 323

Query: 269 PNPLTKIEKLE---AIPGTVPNLITPPGGCRFHPRCPKVMSICKEKVPELKEIEPGHFVA 325
           P P  K+E+      + G VP+ I  P GC FHPRCP  M +C+++ P +KEI PGH+VA
Sbjct: 324 PVPDPKVERTRKRIILRGGVPSPINRPTGCFFHPRCPYKMPVCEKEYPVMKEISPGHWVA 383

Query: 326 CHLY 329
           CHL+
Sbjct: 384 CHLH 387


>pir||F72049 peptide ABC transporter, ATP-binding protein CP0065 [imported] -
           Chlamydophila pneumoniae (strains CWL029 and AR39)
           >gi|4376983|gb|AAD18821.1| (AE001650) ABC ATPase
           Dipeptide Transport [Chlamydophila pneumoniae CWL029]
           >gi|7189002|gb|AAF37954.1| (AE002170) peptide ABC
           transporter, ATP-binding protein [Chlamydophila
           pneumoniae AR39] >gi|8979054|dbj|BAA98889.1| (AP002547)
           ABC ATPase dipeptide transport [Chlamydophila pneumoniae
           J138]
           Length = 324
           
 Score =  253 bits (639), Expect = 2e-66
 Identities = 133/324 (41%), Positives = 201/324 (61%), Gaps = 7/324 (2%)

Query: 7   PILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIESPG 66
           PILQ+ +L++           ++ +SF + +G+T A++GE+G GKSV++ AI +L+  P 
Sbjct: 5   PILQIEDLSITLAKQRQQYPIVQSLSFTINEGQTLAIIGESGSGKSVSAHAILRLLPCPP 64

Query: 67  RIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQIAEAM 126
             V GQV +   +     LL  S    +KI G EI+ IFQ+P ASL+P++T+  Q  E +
Sbjct: 65  FSVSGQVNFQGHN-----LLTASRSIQKKIIGTEISMIFQNPQASLNPVFTIEQQFREII 119

Query: 127 EVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGISNNPRIL 186
             H  + + +   +K +  L+     DP   +N YPH+LSGGM QR+ I + +  +P++L
Sbjct: 120 HTHLALTA-EVAKEKMLYALEETGFHDPRLCLNLYPHQLSGGMLQRICIAMALLCSPKLL 178

Query: 187 IADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYAGKIVEI 246
           IADEPTTALDV++Q QIL LL  +++K   ++++ITHN+GVVAETAD V V+YAG++VE 
Sbjct: 179 IADEPTTALDVSVQYQILQLLKTLQKKTGMSLLIITHNMGVVAETADDVLVLYAGRMVEC 238

Query: 247 GTVDQIFKNPLHPYTQGLLRAVPN-PLTKIEKLEAIPGTVPNLITPPGGCRFHPRCPKVM 305
               Q+F NP HPYT+ LL + P+    ++     IPG  P+    P GCR+HPRC K++
Sbjct: 239 APAVQMFHNPSHPYTRDLLASRPSLQPQQLGSFNPIPGQPPHYTAFPSGCRYHPRCSKIL 298

Query: 306 SICKEKVPELKEIEPGHFVACHLY 329
           + C  + PE+  +  GH V C LY
Sbjct: 299 NRCSAEAPEIYPVREGHKVRCWLY 322


>gb|AAK41513.1| Oligo/dipeptide transport, ATP binding protein (dppD-1) [Sulfolobus
           solfataricus]
           Length = 316
           
 Score =  252 bits (637), Expect = 4e-66
 Identities = 136/323 (42%), Positives = 202/323 (62%), Gaps = 13/323 (4%)

Query: 8   ILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIESPGR 67
           +L+VRNL V+FYT  GIVKA++ V+  + KGE   L GE+G GKS    AI +L+  PG+
Sbjct: 6   LLEVRNLKVYFYTKRGIVKAVDGVNLYLDKGEIVGLAGESGSGKSTIGYAIMRLVPFPGK 65

Query: 68  IVEGQVLYYRDDGSVVDLLKLSEEEIRK-IRGNEIAYIFQDPHASLDPLYTVGYQIAEAM 126
           I  G++L+  ++     +LKL EE  RK  R  +IA +FQ   +   P++ +  QI E +
Sbjct: 66  IESGEILFKGEN-----ILKLDEEAFRKNYRWKKIAMVFQGSMSGFTPVFKIKDQIIEVL 120

Query: 127 EVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGISNNPRIL 186
            +HG     +E I++   ++      DP +    YPHELSGG KQR  I + ++ NP +L
Sbjct: 121 RIHGWNGDYEERIKELFKMVNM----DP-QLAEKYPHELSGGQKQRAFIAMALALNPEVL 175

Query: 187 IADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYAGKIVEI 246
           IADEPTTALDV +Q  IL+LL K++++   ++I ITH+L +++E +DR   +YAGK++E 
Sbjct: 176 IADEPTTALDVMVQEHILNLLKKLRKELNLSIIFITHDLALLSEISDRDYTLYAGKVMES 235

Query: 247 GTVDQIFKNPLHPYTQGLLRAVPNPLTKIEKLEAIPGTVPNLITPPGGCRFHPRCPKVMS 306
           G  + IFK P HPYT  L+ ++   L K + ++ IPG +P+L +PP GCRF+ RCP    
Sbjct: 236 GPSEVIFKKPRHPYTSLLIESIAT-LDK-DIIKGIPGAMPDLSSPPLGCRFNTRCPFARD 293

Query: 307 ICKEKVPELKEIEPGHFVACHLY 329
           IC ++ P++K    G  VAC LY
Sbjct: 294 ICFKEEPKMKTFSDGDEVACWLY 316


>pir||G75117 dipeptide abc transporter, ATP-binding protein (dppf) PAB1875 -
           Pyrococcus abyssi (strain Orsay)
           >gi|5458167|emb|CAB49656.1| (AJ248285) dipeptide ABC
           transporter, ATP-binding protein (dppF) [Pyrococcus
           abyssi]
           Length = 326
           
 Score =  252 bits (636), Expect = 5e-66
 Identities = 137/335 (40%), Positives = 208/335 (61%), Gaps = 25/335 (7%)

Query: 6   EPILQVRNLTVHF-----YTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQ 60
           E +L+V NL  +F     +   G VKA++ VSF++ +GETF LVGE+GCGK+ T R I +
Sbjct: 3   ETVLKVENLKKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTILR 62

Query: 61  LIESPGRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGY 120
           LIE      +G++++   D     + KL  EE++  R  +   +FQDP++SLDP  TV  
Sbjct: 63  LIEP----TDGKIIFMGKD-----VTKLKGEELKWFR-RKAQIMFQDPYSSLDPRQTVFQ 112

Query: 121 QIAEAMEVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGIS 180
            I E ++ HG    + +  +  + +L+SV + +    +  YPHE SGG +QR+ +   ++
Sbjct: 113 IIMEPVKFHGI--QVDDPEEFVIRLLESVGLNE--MHLYRYPHEFSGGQRQRIALARLLA 168

Query: 181 NNPRILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYA 240
             P  ++ DEPT+ALDV++QA IL+ L +++EK+  T + I+H+LGVV   +DR+ VMY 
Sbjct: 169 LKPEFIVLDEPTSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYL 228

Query: 241 GKIVEIGTVDQIFKNPLHPYTQGLLRAVPNPLTKI-----EKLEAIPGTVPNLITPPGGC 295
           GK+VE+G  D+IF+NPLHPYTQ L  A+P P   +     +K   + G  P+ I PP GC
Sbjct: 229 GKLVEVGPADRIFENPLHPYTQMLFSAIPIPDPDLAREMKKKRMKVTGEPPSPINPPKGC 288

Query: 296 RFHPRCPKVMS-ICKEKVPELKEIEPGHFVACHLY 329
           RFHPRCP   + +C ++ P + E+E  H+VAC LY
Sbjct: 289 RFHPRCPYAKAGLCDKEEPPMVEVEKDHYVACWLY 323


>gb|AAC24218.1| (AF055482) ABC transporter [Thermotoga neapolitana]
           Length = 326
           
 Score =  249 bits (629), Expect = 4e-65
 Identities = 127/328 (38%), Positives = 209/328 (63%), Gaps = 11/328 (3%)

Query: 6   EPILQVRNLTVH----FYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQL 61
           E +++ +NL  +    F+     ++A++ VS  ++ GE + + GE+GCGKS   + +   
Sbjct: 2   ETLVEGKNLKAYYVLEFWGKKRTIRAVDNVSLKIFSGEIYGIAGESGCGKSTLLKTLLAN 61

Query: 62  IESPGRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQ 121
           +E P R+  G++ Y+ D    V+++ L EEE R+++   I+YI Q     L+P+  +   
Sbjct: 62  LEPPLRLFGGELNYWLDS-KPVNVVSLKEEERRRLKWRFISYIPQGSMHVLNPVKRIRDT 120

Query: 122 IAEAMEVHGKIKSIKEG-IQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGIS 180
             E ++ H  ++  KE  ++ A++ LK++ +P  +R ++ +PH+LSGGM+QRV I +   
Sbjct: 121 FMEILKSH--VRRQKETFLEMAIEHLKALGLP--SRVLDMFPHQLSGGMRQRVTIALATL 176

Query: 181 NNPRILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYA 240
             PRI++ADEPTTALDV  Q  ++ L+ K++++ K T++L+TH++G+ A+   R+A+MYA
Sbjct: 177 LKPRIILADEPTTALDVVAQRAVIQLIKKIQKELKNTIVLVTHDMGIHAQVTTRMAIMYA 236

Query: 241 GKIVEIGTVDQIFKNPLHPYTQGLLRAVPNPLTKIEKLEAIPGTVPNLITPPGGCRFHPR 300
           GKIVE G   +IFK PLHPYT+ L++++P    K +  E IPG+ P+L++PP GCRFHPR
Sbjct: 237 GKIVEEGPTLEIFKEPLHPYTRYLIQSLPRVGDK-QLREGIPGSPPSLVSPPSGCRFHPR 295

Query: 301 CPKVMSICKEKVPELKEIEPGHFVACHL 328
           CP     C+E+ P   E+ PGH  AC L
Sbjct: 296 CPHATQRCEEEEPVFLEVNPGHRAACFL 323


>dbj|BAB03746.1| (AP001507) oligopeptide ABC transporter (ATP-binding protein)
           [Bacillus halodurans]
           Length = 338
           
 Score =  249 bits (629), Expect = 4e-65
 Identities = 136/332 (40%), Positives = 210/332 (62%), Gaps = 26/332 (7%)

Query: 8   ILQVRNLTVHFYTYAGI-------VKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQ 60
           +L+V  L  +F    GI       VKA++ VSF +Y+GET ++VGE+GCGKS T RAI +
Sbjct: 5   LLKVEGLKQYFPIKGGILGRTVNHVKAVDDVSFTIYEGETVSIVGESGCGKSTTGRAILR 64

Query: 61  LIESPGRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGY 120
           L E      +G++ +  +D     LL L++ E+RK R  ++  IFQDP+AS++P  T+  
Sbjct: 65  LDEP----TDGKIEFQGED-----LLSLNKREMRKKR-KDLQIIFQDPYASINPRQTIRQ 114

Query: 121 QIAEAMEVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGIS 180
            + EAME+   +   K G ++  +++ +V +   + + + +PHE SGG +QR+ I   +S
Sbjct: 115 VLEEAMEIQKVVPRDKRG-ERIRELMDTVGLG--SHQADRFPHEFSGGQRQRIGIARALS 171

Query: 181 NNPRILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYA 240
            NP++++ DE  +ALDV+IQAQ+++LL +++ ++K T + I+H+LGVV   +DRV VMY 
Sbjct: 172 VNPKLIVCDEAVSALDVSIQAQVINLLKRLQREFKLTYLFISHDLGVVRHISDRVIVMYL 231

Query: 241 GKIVEIGTVDQIFKNPLHPYTQGLLRA--VPNPLTKIEKLEAIPGTVPNLITPPGGCRFH 298
           G+IVEI     +F+NP HPYT+ LL A  VP+P  K E++  + G VP+ I PP GCRFH
Sbjct: 232 GRIVEIADKTSLFENPQHPYTKALLSAIPVPDPEKKKERI-ILKGDVPSPIDPPNGCRFH 290

Query: 299 PRCPKVMSICKEKVPELKE---IEPGHFVACH 327
            RCP     C+ + PEL+    ++ GH  ACH
Sbjct: 291 TRCPFATDKCRTETPELRTADYMKDGHLAACH 322


>pir||E82301 peptide ABC transporter, ATP-binding protein VC0617 [imported] -
           Vibrio cholerae (group O1 strain N16961)
           >gi|9655050|gb|AAF93783.1| (AE004147) peptide ABC
           transporter, ATP-binding protein [Vibrio cholerae]
           Length = 327
           
 Score =  249 bits (628), Expect = 5e-65
 Identities = 131/329 (39%), Positives = 202/329 (60%), Gaps = 20/329 (6%)

Query: 7   PILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIESPG 66
           P++ +RNL V + T AG V+A   VSFD+  GE F L GE+GCGKS  + ++ +L + P 
Sbjct: 4   PLISIRNLCVDYITDAGDVRACNNVSFDLAPGEVFGLAGESGCGKSTVAFSLMRLHKPPA 63

Query: 67  RIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQIAEAM 126
            I  G+V++  +D     +LK S+E ++  R  E++ +FQ    +L+P+ T+  Q  + +
Sbjct: 64  FITGGEVIFNGED-----ILKYSDERMQAFRWKEMSMVFQSAMNALNPVLTMEEQFCDVI 118

Query: 127 EVHGKI-----KSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGISN 181
             H  +     K   EG+ + VDI  S        R+N+YPH+ SGGM+QR+VI I ++ 
Sbjct: 119 TRHTNMTREQAKRRAEGLLEIVDIHPS--------RLNDYPHQFSGGMRQRLVIAIALAL 170

Query: 182 NPRILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYAG 241
           NP+++I DEPTTALDV +Q +IL  +  +KE++  +++ ITH+L ++ E +DR+ +MY+G
Sbjct: 171 NPKMIIMDEPTTALDVVVQREILQKIYALKEEFGFSILFITHDLSLMVEFSDRIGIMYSG 230

Query: 242 KIVEIGTVDQIFKNPLHPYTQGLLRAVPNPLTKIE-KLEAIPGTVPNLITPPGGCRFHPR 300
           +++E+    QI + P HPYT+GL  + P PLT  + KL  IPG   NL+  P GCRF  R
Sbjct: 231 ELIEVAPSKQILETPYHPYTKGLGSSFP-PLTGPKTKLTGIPGNPLNLLDIPQGCRFQAR 289

Query: 301 CPKVMSICKEKVPELKEIEPGHFVACHLY 329
           C +V   C +    L++IE G F  CHLY
Sbjct: 290 CDRVHEACTKVPTVLRQIEHGRFSNCHLY 318


>pir||A72216 oligopeptide ABC transporter, ATP-binding protein - Thermotoga
           maritima (strain MSB8)
           >gi|4982328|gb|AAD36815.1|AE001813_7 (AE001813)
           oligopeptide ABC transporter, ATP-binding protein
           [Thermotoga maritima]
           Length = 328
           
 Score =  247 bits (623), Expect = 2e-64
 Identities = 136/325 (41%), Positives = 208/325 (63%), Gaps = 15/325 (4%)

Query: 6   EPILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIESP 65
           +P+LQ  +L  +F     I+KA++ +S ++ +GET  LVGE+GCGKS   R I +L+   
Sbjct: 11  KPLLQTVDLKKYFPQGKRILKAVDGISIEIKEGETLGLVGESGCGKSTLGRTILKLLRPD 70

Query: 66  GRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQIAEA 125
           G    G++ +   +G   D+  L+++E++  R  ++  IFQDP  SL+P  TVG  I + 
Sbjct: 71  G----GKIFF---EGK--DITNLNDKEMKPYR-KKMQIIFQDPLGSLNPQMTVGRIIEDP 120

Query: 126 MEVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGISNNPRI 185
           + +H KI + KE  ++  ++L  V I      +N++PHE SGG +QR+ I   ++ NP+ 
Sbjct: 121 LIIH-KIGTKKERRKRVEELLDMVGIG--REFINSFPHEFSGGQQQRIGIARALALNPKF 177

Query: 186 LIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYAGKIVE 245
           ++ DEP +ALDV+IQAQI+DLL ++++K   + + I HNL VV   + +VAVMY GKIVE
Sbjct: 178 IVCDEPVSALDVSIQAQIIDLLEEIQQKMGISYLFIAHNLAVVEHISHKVAVMYLGKIVE 237

Query: 246 IGTVDQIFKNPLHPYTQGLLRAVPN-PLT-KIEKLEAIPGTVPNLITPPGGCRFHPRCPK 303
            G VD+IF NP+HPYT+ LL++VP  P   + ++  ++ G +P+ I  P GCRF  RC +
Sbjct: 238 YGDVDKIFLNPIHPYTRALLKSVPKIPWDGQKQRFYSLKGELPSPIDLPKGCRFQTRCTE 297

Query: 304 VMSICKEKVPELKEIEPGHFVACHL 328
             +IC EK PEL E+E  HFV+CHL
Sbjct: 298 KKAICFEKEPELTEVEKNHFVSCHL 322


>pir||H71951 dipeptide transport system dipeptide transport system ATP-binding
           protein - Helicobacter pylori (strain J99)
           >gi|4154800|gb|AAD05856.1| (AE001465) DIPEPTIDE
           TRANSPORT SYSTEM DIPEPTIDE TRANSPORT SYSTEM ATP-BINDING
           PROTEIN [Helicobacter pylori J99]
           Length = 287
           
 Score =  246 bits (622), Expect = 2e-64
 Identities = 130/284 (45%), Positives = 190/284 (66%), Gaps = 8/284 (2%)

Query: 8   ILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIESPGR 67
           IL+V++L  +F+T  G+ KA++ VSF + K +T  +VGE+G GKS+TS +I  LIE PG+
Sbjct: 2   ILEVKDLKTYFFTDKGVNKAVDGVSFGLKKSQTLCIVGESGSGKSITSLSILGLIEKPGK 61

Query: 68  IVEGQVLYYRDDGSVVDLLKLSEEEIRK-IRGNEIAYIFQDPHASLDPLYTVGYQIAEAM 126
           IV G + +   D     LL+L E++++K IRG +I  IFQ+P  SL+P YTVG+QI E +
Sbjct: 62  IVGGSIQFLGQD-----LLQLKEKQMQKEIRGKKIGMIFQEPMTSLNPSYTVGFQINEVL 116

Query: 127 EVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGISNNPRIL 186
           ++H    + KE +++ V  L+ V IP    + + YP  LSGG +QRV+I + +   P IL
Sbjct: 117 KIHHPSLNKKERLERVVYELERVGIPHAGDKYHEYPFNLSGGQRQRVMIAMAMVCEPEIL 176

Query: 187 IADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYAGKIVEI 246
           IADEPTTALDVTIQAQIL+L+ ++++K   +++ ITH+LGVVA+ AD V VMY G +VE 
Sbjct: 177 IADEPTTALDVTIQAQILELMKELQQKKGTSILFITHDLGVVAQIADEVVVMYKGHVVEQ 236

Query: 247 GTVDQIFKNPLHPYTQGLLRAVPNPLTKIEK--LEAIPGTVPNL 288
            +  ++F +P HPYT+ LL A+P P  +  K  LE +   V  L
Sbjct: 237 ASAKELFADPRHPYTKALLNAIPKPGKEYRKKRLETVDENVDYL 280


>pir||T34760 oligopeptide ABC transporter ATP-binding protein - Streptomyces
           coelicolor >gi|3402247|emb|CAA20183.1| (AL031184)
           oligopeptide ABC transporter ATP-binding protein
           [Streptomyces coelicolor A3(2)]
           Length = 496
           
 Score =  246 bits (621), Expect = 3e-64
 Identities = 136/333 (40%), Positives = 200/333 (59%), Gaps = 24/333 (7%)

Query: 6   EPILQVRNLTVHF-------YTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAI 58
           E +L+V  L  HF           G V+A++ + F+V  GET  +VGE+GCGKS   R I
Sbjct: 37  ETLLKVTGLQKHFPIRKGLLQRQVGAVRAVDGIDFEVRSGETLGVVGESGCGKSTMGRLI 96

Query: 59  TQLIESPGRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTV 118
           T+L+E     VE Q           D+  L    +R +R  ++  IFQDP++SL+P +T+
Sbjct: 97  TRLLEPTAGKVEFQGK---------DITHLGVGGMRPLR-RDVQMIFQDPYSSLNPRHTI 146

Query: 119 GYQIAEAMEVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIG 178
           G  ++   ++ G     + G++K V  L SV+  +P    N YPHE SGG +QR+ I   
Sbjct: 147 GTIVSAPFKLQGV--QPEGGVKKEVQRLLSVVGLNP-EHYNRYPHEFSGGQRQRIGIARA 203

Query: 179 ISNNPRILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVM 238
           ++ NPR+++ADEP +ALDV+IQAQ+++LL+ ++++   T ++I H+L VV   +DR+AVM
Sbjct: 204 LALNPRLVVADEPVSALDVSIQAQVVNLLDDLQQELGLTYVIIAHDLSVVRHVSDRIAVM 263

Query: 239 YAGKIVEIGTVDQIFKNPLHPYTQGLLRAV--PNPLTKIEKLEAI--PGTVPNLITPPGG 294
           Y GKI+E+   D ++K P+HPYT+ L+ AV  P+P  +  K E I   G VP+ I PP G
Sbjct: 264 YLGKIMELADRDLLYKTPMHPYTKALMSAVPIPDPARRGAKSERILLKGDVPSPIAPPSG 323

Query: 295 CRFHPRCPKVMSICKEKVPELKEIEPGHFVACH 327
           CRFH RC K   +C    P LKE+ PG  VACH
Sbjct: 324 CRFHTRCWKATQVCTTTEPPLKELRPGQQVACH 356


>pir||F72428 oligopeptide ABC transporter, ATP-binding protein - Thermotoga
           maritima (strain MSB8)
           >gi|4980512|gb|AAD35122.1|AE001690_16 (AE001690)
           oligopeptide ABC transporter, ATP-binding protein
           [Thermotoga maritima]
           Length = 330
           
 Score =  245 bits (620), Expect = 4e-64
 Identities = 140/328 (42%), Positives = 195/328 (58%), Gaps = 9/328 (2%)

Query: 6   EPILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIESP 65
           E +L+  N+  ++      VKA++ +SF++ + E   +VGE+GCGK+  S  I   +  P
Sbjct: 3   EILLKAENVRAYYKLEKVSVKAVDGLSFEILEDEVIGVVGESGCGKTTLSNVIFMNMVKP 62

Query: 66  GRIVEGQVLYYRDDGSVVDLLKLSEEEI-RKIRGNEIAYIFQDPHASLDPLYTVGYQIAE 124
             +V+G++ + R +G  V+L  ++ +E+ RK  G EI  I Q    +L P   +   +  
Sbjct: 63  LTLVDGKI-FLRVNGEFVELSSMTRDEVKRKFWGKEITIIPQAAMNALMPTIRMEKYVRH 121

Query: 125 AMEVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGISNNPR 184
             E HG  +  +E + KA    + V + DP   +  YP ELSGGM+QR VI I    NP 
Sbjct: 122 LAESHGIDE--EELLDKARRRFEEVGL-DPLW-IKRYPFELSGGMRQRAVIAIATILNPS 177

Query: 185 ILIADEPTTALDVTIQAQILDLLNKMKEK-YKATVILITHNLGVVAETADRVAVMYAGKI 243
           +LIADEPT+ALDV  Q  +L +L +MK +    ++I ITH++  V + ADR+ +MYAGKI
Sbjct: 178 LLIADEPTSALDVVNQKVLLKVLMQMKRQGIVKSIIFITHDIATVRQIADRMIIMYAGKI 237

Query: 244 VEIGTVDQIFKNPLHPYTQGLLRAV--PNPLTKIEKLEAIPGTVPNLITPPGGCRFHPRC 301
           VE   V+ + + PLHPYTQGL  +V  P P  K   +  IPG  PNLI PP GCRFHPRC
Sbjct: 238 VEFAPVESLLEKPLHPYTQGLFNSVLTPEPEVKKRGITTIPGAPPNLINPPSGCRFHPRC 297

Query: 302 PKVMSICKEKVPELKEIEPGHFVACHLY 329
           P  M +CKEK P L EIEPG  VAC LY
Sbjct: 298 PHAMDVCKEKEPPLTEIEPGRRVACWLY 325


>emb|CAC11410.1| (AL445063) probable sporulation protein (spo0KD) [Thermoplasma
           acidophilum]
           Length = 321
           
 Score =  245 bits (620), Expect = 4e-64
 Identities = 134/326 (41%), Positives = 203/326 (62%), Gaps = 11/326 (3%)

Query: 8   ILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIESPGR 67
           +L +++L V + T AG  K I+ ++ D+ +GE  +LVGE+  GKS   + I++++   G 
Sbjct: 2   LLSIKHLNVWYNTVAGKYKVIDDLNLDIDQGELVSLVGESASGKSTLGQVISRMLPPVG- 60

Query: 68  IVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQIAEAME 127
           I  G+V+    DG  VD+LKLSE+E+ KIRG  +  IFQ+P  SL+P+  +  Q+ EA+ 
Sbjct: 61  ITSGEVVL---DG--VDVLKLSEKEMTKIRGTTVFMIFQNPLNSLNPVKRIEEQLMEALA 115

Query: 128 VHGKIKSIK----EGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGISNNP 183
           +     +I+    E  ++ +  L+S+ +PDP + +  YPHELSGG  QRVVI + +   P
Sbjct: 116 IRNSRMNIQMTFEEARKEVIKALESLRLPDPEKILIRYPHELSGGQVQRVVICMALLLRP 175

Query: 184 RILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYAGKI 243
           ++LIADEPTTALDVTIQAQ++ LL  +    K T+I ITH++G+    +DR+ V YAG++
Sbjct: 176 KLLIADEPTTALDVTIQAQVVKLLKDLNRDTKMTIIFITHDVGLAYVLSDRMLVFYAGRV 235

Query: 244 VEIGTVDQIFKNPLHPYTQGLLRAVPNPLTKIEKLEAIPGTVPNLITPPGGCRFHPRCPK 303
           +E G   +I KNPLHPYT GLL ++P+      KL +IPG  P+ ++ P GC+F PRC  
Sbjct: 236 MEQGQTVEIVKNPLHPYTSGLLASIPSSPKHSGKLYSIPGYPPSYLSLPKGCKFAPRCRF 295

Query: 304 VMSICKEKVPELKEIEPGHFVACHLY 329
               C E+ P   + +    + C LY
Sbjct: 296 AFERCFEEEPSYIK-KDNRLIRCWLY 320


>pir||E64557 dipeptide transport ATP-binding protein dppD - Helicobacter pylori
           (strain 26695) >gi|2313399|gb|AAD07370.1| (AE000548)
           dipeptide ABC transporter, ATP-binding protein (dppD)
           [Helicobacter pylori 26695]
           Length = 287
           
 Score =  245 bits (619), Expect = 5e-64
 Identities = 130/284 (45%), Positives = 190/284 (66%), Gaps = 8/284 (2%)

Query: 8   ILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIESPGR 67
           IL+V++L  +F+T  G+ KA++ VSF + K +T  +VGE+G GKS+TS +I  LIE PG+
Sbjct: 2   ILEVKDLKTYFFTDKGVNKAVDGVSFGLKKSQTLCIVGESGSGKSITSLSILGLIEKPGQ 61

Query: 68  IVEGQVLYYRDDGSVVDLLKLSEEEIRK-IRGNEIAYIFQDPHASLDPLYTVGYQIAEAM 126
           IV G + +   D     LL+L E++++K IRG +I  IFQ+P  SL+P YTVG+QI E +
Sbjct: 62  IVGGSIQFLGQD-----LLQLKEKQMQKEIRGKKIGMIFQEPMTSLNPSYTVGFQINEVL 116

Query: 127 EVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGISNNPRIL 186
           ++H    + KE +++ V  L+ V IP    + + YP  LSGG +QRV+I + +   P IL
Sbjct: 117 KIHHPNLNKKERLERVVYELERVGIPHAGDKYHEYPFNLSGGQRQRVMIAMAMVCEPEIL 176

Query: 187 IADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYAGKIVEI 246
           IADEPTTALDVTIQAQIL+L+ ++++K   +++ ITH+LGVVA+ AD V VMY G +VE 
Sbjct: 177 IADEPTTALDVTIQAQILELMKELQQKKGTSILFITHDLGVVAQIADEVVVMYKGHVVEQ 236

Query: 247 GTVDQIFKNPLHPYTQGLLRAVPNPLTKIEK--LEAIPGTVPNL 288
            +  ++F +P HPYT+ LL A+P P  +  K  LE +   V  L
Sbjct: 237 ASAKELFADPRHPYTKALLSAIPKPGKEYRKKRLETVDENVDYL 280


>pir||F71483 probable dipeptide transport - Chlamydia trachomatis  (serotype D,
           strain UW3/Cx) >gi|3329143|gb|AAC68285.1| (AE001339) ABC
           Transport ATPase [Chlamydia trachomatis]
           Length = 321
           
 Score =  243 bits (615), Expect = 2e-63
 Identities = 127/324 (39%), Positives = 200/324 (61%), Gaps = 7/324 (2%)

Query: 6   EPILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIESP 65
           +P+LQV+NL+V          A++ +SFDV+ G+T A++GE+G GKS+T++++ QL+   
Sbjct: 4   QPLLQVKNLSVSLNRNRVSFLAVDSLSFDVFPGQTLAIIGESGSGKSITAQSLMQLLPEE 63

Query: 66  GRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQIAEA 125
              + G+ L+ +++     LL       + + G++I+ IFQ+P AS DP++T+  Q  E 
Sbjct: 64  NFSLSGEALFNKEN-----LLDRKNTNAKVLFGSKISMIFQNPLASFDPVFTIEQQFHEV 118

Query: 126 MEVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGISNNPRI 185
           +  H  I + K   ++ + +L+     DP R +  YPHELSGGM QR+ I + +  +P +
Sbjct: 119 IRTHLGISN-KMAHEQMLAVLRETGFQDPERCIKLYPHELSGGMLQRMAIAMTLLTSPDL 177

Query: 186 LIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYAGKIVE 245
           LIADEPTTALDV++Q QIL LL  +++K   ++++ITH++GVVAE AD V V+YAG++ E
Sbjct: 178 LIADEPTTALDVSVQYQILQLLKTLQKKTGMSLLIITHDMGVVAEMADDVFVLYAGRMAE 237

Query: 246 IGTVDQIFKNPLHPYTQGLLRAVPNPLTKIEKLEAIPGTVPNLITPPGGCRFHPRCPKVM 305
             +V +IF +P HPYT+ LL + P+   + +    I G  P+  + P GC + PRC K  
Sbjct: 238 YSSVQEIFHSPAHPYTEDLLASRPSQYRQ-QTFVPIAGQPPHYTSLPKGCCYSPRCRKAQ 296

Query: 306 SICKEKVPELKEIEPGHFVACHLY 329
            IC EK P+   +   H V C LY
Sbjct: 297 PICFEKSPDSLSLNDHHRVRCWLY 320


>gb|AAK43155.1| Maltose ABC transporter, ATP-binding protein [Sulfolobus
           solfataricus]
           Length = 617
           
 Score =  243 bits (614), Expect = 2e-63
 Identities = 129/330 (39%), Positives = 203/330 (61%), Gaps = 12/330 (3%)

Query: 1   MRKVPEPILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQ 60
           M ++ + +L+V  LT  ++   G V  +  V+F+VY  E FA+ GE+GCGKS  + AI  
Sbjct: 1   MEEIMDSLLKVNELTAGYFNQDGFVIGVTNVNFEVYPNEIFAIAGESGCGKSTLAMAIYG 60

Query: 61  LIESPGRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGY 120
           L++ PG ++ G V Y +D     D+L +++EE+RK+R  E  Y+ Q    +LDP+  +G 
Sbjct: 61  LLKYPGVVLRGHV-YLKDK----DILSITQEELRKLRMKEFVYVPQFAMDALDPVAKIGD 115

Query: 121 QIAEAMEVHG-KIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGI 179
           Q+  A   HG  ++  ++ I++ ++     L+  P   VN YPHELSGGM+QRVVI   I
Sbjct: 116 QMMRAAVSHGVNVEEARKLIKEKLE-----LVDLPYNVVNMYPHELSGGMRQRVVIATSI 170

Query: 180 SNNPRILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMY 239
             NP ++I DEPTT LDV +Q +IL  L +++ +   ++++I+H++ ++   +DRV +MY
Sbjct: 171 LLNPSLIILDEPTTGLDVIVQYEILKDLKRIQRQLGVSLVIISHDISMLLMISDRVGIMY 230

Query: 240 AGKIVEIGTVDQIFKNPLHPYTQGLLRAVPNPLTKIEKLEAIPGTVPNLITP-PGGCRFH 298
           AG+IVEIG+ ++I K P HPYT  L+ ++P+ + + EKL +IPG  P +++  P  CRF+
Sbjct: 231 AGEIVEIGSKEEIIKRPSHPYTYLLISSLPSLVKRREKLLSIPGNPPLMLSKVPNSCRFY 290

Query: 299 PRCPKVMSICKEKVPELKEIEPGHFVACHL 328
            RCP  M  C    P L +I  GH   C L
Sbjct: 291 DRCPFKMEKCSTLNPALGDIMDGHKARCFL 320


 Score =  168 bits (421), Expect = 9e-41
 Identities = 93/277 (33%), Positives = 158/277 (56%), Gaps = 20/277 (7%)

Query: 6   EPILQVRNLTVHFYTYAGIV-----KAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQ 60
           E ++++ NL+  +Y    ++      A+  VSF++ KG   ALVG +G GKS  ++ +  
Sbjct: 354 EVVMKILNLSKIYYIRKNLILSEPINAVNDVSFELKKGTITALVGGSGHGKSTIAKILAG 413

Query: 61  LIESPGRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRG--NEIAYIFQDPHASLDPLYTV 118
           +I+       G+++    D        +SE  +R        +  IFQDP++SLDP +TV
Sbjct: 414 MIQQ----TSGKIILLGKD--------VSEYGVRNSMWYKENVQMIFQDPYSSLDPRHTV 461

Query: 119 GYQIAEAMEVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIG 178
            + +   + +H K+ +  + + K +++LK+V +  P + +  YPHELSGG +QRV I   
Sbjct: 462 RWHVERPLLIHKKVSNKDQLLPKIIEVLKNVGLKPPEKYLYKYPHELSGGERQRVAIARA 521

Query: 179 ISNNPRILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVM 238
            +  P++L+ADEP + LD +++A IL+L+ K K K   +++ ITH++  V   AD + V+
Sbjct: 522 TAVEPKVLVADEPVSMLDASLRAGILNLIKKFK-KNGISILYITHDIATVNYIADEIMVI 580

Query: 239 YAGKIVEIGTVDQIFKNPLHPYTQGLLRAVPNPLTKI 275
           Y G+IVE G   ++  NP H YT+ L+ AVP+P   I
Sbjct: 581 YKGRIVEKGNTYEVISNPSHEYTKRLIEAVPDPYKTI 617


>pir||D71163 probable oligopeptide transport ATP-binding protein AppF -
           Pyrococcus horikoshii >gi|3256910|dbj|BAA29593.1|
           (AP000002) 324aa long hypothetical oligopeptide
           transport ATP-binding protein AppF [Pyrococcus
           horikoshii]
           Length = 324
           
 Score =  241 bits (609), Expect = 8e-63
 Identities = 133/326 (40%), Positives = 204/326 (61%), Gaps = 16/326 (4%)

Query: 8   ILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIESPGR 67
           +L+VRNL +++ T  G VKA++ VSF+V KGE F + GE+GCGKS    ++  ++  P  
Sbjct: 3   LLRVRNLRIYYSTPRGFVKAVDGVSFEVKKGEVFGIAGESGCGKSTLVHSL--ILRKPPM 60

Query: 68  IVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQIAEAME 127
             +G    ++      DL+KLS EE RKI+  E++ I Q    +L+P   +   + +   
Sbjct: 61  THKGGKAIFKGK----DLMKLSREEARKIQYKELSIIPQYAMNALNPTKKIKDIVWDLAR 116

Query: 128 VHGKI--KSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGISNNPRI 185
            HG    K +++ +++ + ++K  L P  A     YP ELSGGM+QR  + +    NP +
Sbjct: 117 EHGMQDKKEVEKLLKERLSMVK--LSPKVAEM---YPVELSGGMRQRATMVVSTLLNPDL 171

Query: 186 LIADEPTTALDVTIQAQILDLLNK-MKEKYKATVILITHNLGVVAETADRVAVMYAGKIV 244
           LIADE T+ALDVT Q  +++LL+  M+E    ++I +TH+L ++ + ADRV +MYAGK+V
Sbjct: 172 LIADEVTSALDVTTQRVVIELLHHFMEEGIVKSIIFVTHDLALLRQIADRVMIMYAGKVV 231

Query: 245 EIGTVDQIFKNPLHPYTQGLLRAVPNPLT--KIEKLEAIPGTVPNLITPPGGCRFHPRCP 302
           EIG+++++ ++P HPYTQ LL ++P      K E+L  IPG   +L+ PP GCRF+ RCP
Sbjct: 232 EIGSMEEVLESPAHPYTQLLLNSLPRMGVHYKRERLRGIPGYPISLLNPPEGCRFYTRCP 291

Query: 303 KVMSICKEKVPELKEIEPGHFVACHL 328
             M +C+E  PEL E+ PGH+ ACHL
Sbjct: 292 YAMQVCREVEPELVEVSPGHYAACHL 317


>dbj|BAA35517.1| (D90720) Hypothetical ABC transporter ATP-binding protein in bcr
           5'region. [Escherichia coli] >gi|4062406|dbj|BAA35524.1|
           (D90721) Hypothetical ABC transporter ATP-binding
           protein in bcr 5'region. [Escherichia coli]
           Length = 659
           
 Score =  240 bits (607), Expect = 1e-62
 Identities = 126/263 (47%), Positives = 182/263 (68%), Gaps = 2/263 (0%)

Query: 8   ILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIESPGR 67
           +L V NL + F      + A+  +SF + +GET A+VGE+G GKSVT+ A+ +L+E  G 
Sbjct: 48  VLAVENLNIAFMQDQQKIAAVRNLSFSLQRGETLAIVGESGSGKSVTALALMRLLEQAGG 107

Query: 68  IVE-GQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQIAEAM 126
           +V+  ++L  R    V++L + +  ++R +RG ++A IFQ+P  SL+P++TVG QIAE++
Sbjct: 108 LVQCDKMLLQRRSREVIELSEQNAAQMRHVRGADMAMIFQEPMTSLNPVFTVGEQIAESI 167

Query: 127 EVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGISNNPRIL 186
            +H    S +E + +A  +L  V IP+    ++ YPH+LSGGM+QRV+I + +S  P +L
Sbjct: 168 RLHQNA-SREEAMVEAKRMLDQVRIPEAQTILSRYPHQLSGGMRQRVMIAMALSCRPAVL 226

Query: 187 IADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYAGKIVEI 246
           IADEPTTALDVTIQAQIL L+  ++++    VI ITH++GVVAE ADRV VMY G+ VE 
Sbjct: 227 IADEPTTALDVTIQAQILQLIKVLQKEMSMGVIFITHDMGVVAEIADRVLVMYQGEAVET 286

Query: 247 GTVDQIFKNPLHPYTQGLLRAVP 269
           GTV+QIF  P HPYT+ LL AVP
Sbjct: 287 GTVEQIFHAPQHPYTRALLAAVP 309


 Score =  212 bits (534), Expect = 5e-54
 Identities = 129/328 (39%), Positives = 199/328 (60%), Gaps = 34/328 (10%)

Query: 6   EPILQVRNLTVHFYTYAGI-------VKAIEKVSFDVYKGETFALVGETGCGKSVTSRAI 58
           EP+L+VRNL   F   +G+       V A+EKVSFD++ GET +LVGE+G GKS T RA+
Sbjct: 347 EPVLRVRNLVTRFPLRSGLLNRVTREVHAVEKVSFDLWPGETLSLVGESGSGKSTTGRAL 406

Query: 59  TQLIESPGRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTV 118
            +L+ES G    G++++   +G  +D L  S  +++ +R  +I +IFQDP+ASLDP  T+
Sbjct: 407 LRLVESQG----GEIIF---NGQRIDTL--SPGKLQALR-RDIQFIFQDPYASLDPRQTI 456

Query: 119 GYQIAEAMEVHGKIKSIKEGIQKAVDILKSV-LIPDPARRVNNYPHELSGGMKQRVVIGI 177
           G  I E + VHG +   K+   +   +L+ V L+P+ A R   YPHE SGG +QR+ I  
Sbjct: 457 GDSIIEPLRVHGLLPG-KDAAARVAWLLERVGLLPEHAWR---YPHEFSGGQRQRICIAR 512

Query: 178 GISNNPRILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAV 237
            ++ NP+++IADE  +ALDV+I+ QI++LL  ++  +    + I+H++ VV   + RVAV
Sbjct: 513 ALALNPKVIIADEAVSALDVSIRGQIINLLLDLQRDFGIAYLFISHDMAVVERISHRVAV 572

Query: 238 MYAGKIVEIGTVDQIFKNPLHPYTQGLLRAVPNPLTKIEKLEAIPGTVPNLITPPGGCRF 297
           MY G+IVEIG    +F+NP HPYT+ LL AVP      ++ + +      L++       
Sbjct: 573 MYLGQIVEIGPRRAVFENPQHPYTRKLLAAVPVAEPSRQRPQRV------LLSDDLPSNI 626

Query: 298 HPRCPKVMSICKEKVPELKEIEPGHFVA 325
           H R  +V ++       L+ + PGH+VA
Sbjct: 627 HLRGEEVAAV------SLQCVGPGHYVA 648


>sp|P75796|YLIA_ECOLI HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PROTEIN YLIA
           Length = 629
           
 Score =  240 bits (607), Expect = 1e-62
 Identities = 126/263 (47%), Positives = 182/263 (68%), Gaps = 2/263 (0%)

Query: 8   ILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIESPGR 67
           +L V NL + F      + A+  +SF + +GET A+VGE+G GKSVT+ A+ +L+E  G 
Sbjct: 18  VLAVENLNIAFMQDQQKIAAVRNLSFSLQRGETLAIVGESGSGKSVTALALMRLLEQAGG 77

Query: 68  IVE-GQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQIAEAM 126
           +V+  ++L  R    V++L + +  ++R +RG ++A IFQ+P  SL+P++TVG QIAE++
Sbjct: 78  LVQCDKMLLQRRSREVIELSEQNAAQMRHVRGADMAMIFQEPMTSLNPVFTVGEQIAESI 137

Query: 127 EVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGISNNPRIL 186
            +H    S +E + +A  +L  V IP+    ++ YPH+LSGGM+QRV+I + +S  P +L
Sbjct: 138 RLHQNA-SREEAMVEAKRMLDQVRIPEAQTILSRYPHQLSGGMRQRVMIAMALSCRPAVL 196

Query: 187 IADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYAGKIVEI 246
           IADEPTTALDVTIQAQIL L+  ++++    VI ITH++GVVAE ADRV VMY G+ VE 
Sbjct: 197 IADEPTTALDVTIQAQILQLIKVLQKEMSMGVIFITHDMGVVAEIADRVLVMYQGEAVET 256

Query: 247 GTVDQIFKNPLHPYTQGLLRAVP 269
           GTV+QIF  P HPYT+ LL AVP
Sbjct: 257 GTVEQIFHAPQHPYTRALLAAVP 279


 Score =  212 bits (534), Expect = 5e-54
 Identities = 129/328 (39%), Positives = 199/328 (60%), Gaps = 34/328 (10%)

Query: 6   EPILQVRNLTVHFYTYAGI-------VKAIEKVSFDVYKGETFALVGETGCGKSVTSRAI 58
           EP+L+VRNL   F   +G+       V A+EKVSFD++ GET +LVGE+G GKS T RA+
Sbjct: 317 EPVLRVRNLVTRFPLRSGLLNRVTREVHAVEKVSFDLWPGETLSLVGESGSGKSTTGRAL 376

Query: 59  TQLIESPGRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTV 118
            +L+ES G    G++++   +G  +D L  S  +++ +R  +I +IFQDP+ASLDP  T+
Sbjct: 377 LRLVESQG----GEIIF---NGQRIDTL--SPGKLQALR-RDIQFIFQDPYASLDPRQTI 426

Query: 119 GYQIAEAMEVHGKIKSIKEGIQKAVDILKSV-LIPDPARRVNNYPHELSGGMKQRVVIGI 177
           G  I E + VHG +   K+   +   +L+ V L+P+ A R   YPHE SGG +QR+ I  
Sbjct: 427 GDSIIEPLRVHGLLPG-KDAAARVAWLLERVGLLPEHAWR---YPHEFSGGQRQRICIAR 482

Query: 178 GISNNPRILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAV 237
            ++ NP+++IADE  +ALDV+I+ QI++LL  ++  +    + I+H++ VV   + RVAV
Sbjct: 483 ALALNPKVIIADEAVSALDVSIRGQIINLLLDLQRDFGIAYLFISHDMAVVERISHRVAV 542

Query: 238 MYAGKIVEIGTVDQIFKNPLHPYTQGLLRAVPNPLTKIEKLEAIPGTVPNLITPPGGCRF 297
           MY G+IVEIG    +F+NP HPYT+ LL AVP      ++ + +      L++       
Sbjct: 543 MYLGQIVEIGPRRAVFENPQHPYTRKLLAAVPVAEPSRQRPQRV------LLSDDLPSNI 596

Query: 298 HPRCPKVMSICKEKVPELKEIEPGHFVA 325
           H R  +V ++       L+ + PGH+VA
Sbjct: 597 HLRGEEVAAV------SLQCVGPGHYVA 618


>pir||E64820 probable oligopeptide transport protein - Escherichia coli
           >gi|1787051|gb|AAC73916.1| (AE000185) putative
           ATP-binding component of a transport system [Escherichia
           coli K12]
           Length = 612
           
 Score =  240 bits (605), Expect = 2e-62
 Identities = 126/263 (47%), Positives = 182/263 (68%), Gaps = 2/263 (0%)

Query: 8   ILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIESPGR 67
           +L V NL + F      + A+  +SF + +GET A+VGE+G GKSVT+ A+ +L+E  G 
Sbjct: 1   MLAVENLNIAFMQDQQKIAAVRNLSFSLQRGETLAIVGESGSGKSVTALALMRLLEQAGG 60

Query: 68  IVE-GQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQIAEAM 126
           +V+  ++L  R    V++L + +  ++R +RG ++A IFQ+P  SL+P++TVG QIAE++
Sbjct: 61  LVQCDKMLLQRRSREVIELSEQNAAQMRHVRGADMAMIFQEPMTSLNPVFTVGEQIAESI 120

Query: 127 EVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGISNNPRIL 186
            +H    S +E + +A  +L  V IP+    ++ YPH+LSGGM+QRV+I + +S  P +L
Sbjct: 121 RLHQNA-SREEAMVEAKRMLDQVRIPEAQTILSRYPHQLSGGMRQRVMIAMALSCRPAVL 179

Query: 187 IADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYAGKIVEI 246
           IADEPTTALDVTIQAQIL L+  ++++    VI ITH++GVVAE ADRV VMY G+ VE 
Sbjct: 180 IADEPTTALDVTIQAQILQLIKVLQKEMSMGVIFITHDMGVVAEIADRVLVMYQGEAVET 239

Query: 247 GTVDQIFKNPLHPYTQGLLRAVP 269
           GTV+QIF  P HPYT+ LL AVP
Sbjct: 240 GTVEQIFHAPQHPYTRALLAAVP 262


 Score =  212 bits (534), Expect = 5e-54
 Identities = 129/328 (39%), Positives = 199/328 (60%), Gaps = 34/328 (10%)

Query: 6   EPILQVRNLTVHFYTYAGI-------VKAIEKVSFDVYKGETFALVGETGCGKSVTSRAI 58
           EP+L+VRNL   F   +G+       V A+EKVSFD++ GET +LVGE+G GKS T RA+
Sbjct: 300 EPVLRVRNLVTRFPLRSGLLNRVTREVHAVEKVSFDLWPGETLSLVGESGSGKSTTGRAL 359

Query: 59  TQLIESPGRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTV 118
            +L+ES G    G++++   +G  +D L  S  +++ +R  +I +IFQDP+ASLDP  T+
Sbjct: 360 LRLVESQG----GEIIF---NGQRIDTL--SPGKLQALR-RDIQFIFQDPYASLDPRQTI 409

Query: 119 GYQIAEAMEVHGKIKSIKEGIQKAVDILKSV-LIPDPARRVNNYPHELSGGMKQRVVIGI 177
           G  I E + VHG +   K+   +   +L+ V L+P+ A R   YPHE SGG +QR+ I  
Sbjct: 410 GDSIIEPLRVHGLLPG-KDAAARVAWLLERVGLLPEHAWR---YPHEFSGGQRQRICIAR 465

Query: 178 GISNNPRILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAV 237
            ++ NP+++IADE  +ALDV+I+ QI++LL  ++  +    + I+H++ VV   + RVAV
Sbjct: 466 ALALNPKVIIADEAVSALDVSIRGQIINLLLDLQRDFGIAYLFISHDMAVVERISHRVAV 525

Query: 238 MYAGKIVEIGTVDQIFKNPLHPYTQGLLRAVPNPLTKIEKLEAIPGTVPNLITPPGGCRF 297
           MY G+IVEIG    +F+NP HPYT+ LL AVP      ++ + +      L++       
Sbjct: 526 MYLGQIVEIGPRRAVFENPQHPYTRKLLAAVPVAEPSRQRPQRV------LLSDDLPSNI 579

Query: 298 HPRCPKVMSICKEKVPELKEIEPGHFVA 325
           H R  +V ++       L+ + PGH+VA
Sbjct: 580 HLRGEEVAAV------SLQCVGPGHYVA 601


>pir||E70141 oligopeptide transport ATP-binding protein oppD - Lyme disease
           spirochete >gi|2281462|gb|AAC46287.1| (AF000366)
           oligopeptide permease homolog D [Borrelia burgdorferi]
           >gi|2688243|gb|AAC66722.1| (AE001140) oligopeptide ABC
           transporter, ATP-binding protein (oppD) [Borrelia
           burgdorferi]
           Length = 290
           
 Score =  239 bits (604), Expect = 3e-62
 Identities = 125/264 (47%), Positives = 181/264 (68%), Gaps = 7/264 (2%)

Query: 6   EPILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIESP 65
           E IL+++NLT+ F      +  +  V+  V +GE  A+VGE+G GKSVTS AI +L+   
Sbjct: 4   ENILEIKNLTIEFRLKHTTIHPVSNVNLSVKRGEIRAIVGESGSGKSVTSMAILKLLPEL 63

Query: 66  GRIVE-GQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQIAE 124
             + + G++L+   D     LLKLSE+E+ KIRGN+I+ IFQDP  SL+P   +  Q+ E
Sbjct: 64  TTVYKSGEILFENQD-----LLKLSEKELLKIRGNKISMIFQDPMTSLNPFLRISTQLEE 118

Query: 125 AMEVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGISNNPR 184
            + +H  +   KE  +KA+++LK+V + +   R+ ++PH+ SGGM+QRV+I + +S +P 
Sbjct: 119 TIILHQGLGK-KEAKEKAIEMLKTVGVVNAEERIKHFPHQFSGGMRQRVMIAMALSCHPS 177

Query: 185 ILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYAGKIV 244
           +LIADEPTTALDVTIQ QIL L+  + +K+  + I ITH+L VVAE  D V+VMY GKIV
Sbjct: 178 LLIADEPTTALDVTIQEQILLLIKNLSKKFNTSTIFITHDLAVVAEICDTVSVMYQGKIV 237

Query: 245 EIGTVDQIFKNPLHPYTQGLLRAV 268
           E GTV++IF NP HPYT GLL+++
Sbjct: 238 EEGTVEEIFNNPKHPYTIGLLKSI 261


>dbj|BAB04070.1| (AP001508) oligopeptide ABC transporter (ATP-binding protein)
           [Bacillus halodurans]
           Length = 332
           
 Score =  239 bits (604), Expect = 3e-62
 Identities = 133/332 (40%), Positives = 197/332 (59%), Gaps = 23/332 (6%)

Query: 6   EPILQVRNLTVHFYTYAG-------IVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAI 58
           E +L+ + LT HF    G       +++A++ V   +Y GET  +VGE+GCGKS   + +
Sbjct: 3   EVLLEAKGLTKHFDVSEGFFKRKKAVLRAVDGVDLTIYAGETLGIVGESGCGKSTLGQLL 62

Query: 59  TQLIESPGRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTV 118
            +L+E       G + +    GS  D L L  E +R+ R ++I  IFQDP +SL+P  TV
Sbjct: 63  MRLLEP----TRGTLSFA---GS--DFLALKGEALRQKR-SDIQIIFQDPFSSLNPRMTV 112

Query: 119 GYQIAEAMEVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIG 178
              I E ++ H   K     + K VD L   +  D +     YPHE SGG +QR+ I   
Sbjct: 113 REIIGEPLKTHRLAKG--NDLIKRVDELMDAVGLDRSY-AKRYPHEFSGGQRQRIGIARA 169

Query: 179 ISNNPRILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVM 238
           I+  P+++I DEP +ALDV+IQAQIL+L+ +++++++ T + I H L  V   +DR+AVM
Sbjct: 170 IALKPKLIICDEPVSALDVSIQAQILNLMVRLQKEFQLTFLFIAHGLPAVKHISDRMAVM 229

Query: 239 YAGKIVEIGTVDQIFKNPLHPYTQGLLRAVPNP---LTKIEKLEAIPGTVPNLITPPGGC 295
           Y GK+VE+ + D +F  P+HPY++GL++AVP P   +   +K   + G +P+ + PP GC
Sbjct: 230 YLGKVVELASKDALFAQPMHPYSEGLIQAVPIPDPTVRNDKKWVTLEGDLPSPVHPPSGC 289

Query: 296 RFHPRCPKVMSICKEKVPELKEIEPGHFVACH 327
           RFHPRCP     C  + P L E EPGHFVACH
Sbjct: 290 RFHPRCPYAQDKCTVQEPALTEKEPGHFVACH 321


>pir||E71130 probable oligopeptide transport ATP-binding protein APPD -
           Pyrococcus horikoshii >gi|3257220|dbj|BAA29903.1|
           (AP000003) 327aa long hypothetical oligopeptide
           transport ATP-binding protein APPD [Pyrococcus
           horikoshii]
           Length = 327
           
 Score =  239 bits (603), Expect = 4e-62
 Identities = 132/321 (41%), Positives = 193/321 (60%), Gaps = 10/321 (3%)

Query: 8   ILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIESPGR 67
           IL++  LTV + T  G V A+  VSF V KG    ++GE+G GKS     I + +    R
Sbjct: 4   ILEIEGLTVKYKTRYGTVHALSNVSFSVKKGSIVGIIGESGSGKSTLGHTILRTLPENAR 63

Query: 68  IVEGQVLYYRDDGSVVDLLKLSEEEIRK-IRGNEIAYIFQDPHASLDPLYTVGYQIAEAM 126
           I  G++++   +GS  DLL++ EE  R+  R  +I+ IFQ+   +  P++ +  Q+ +  
Sbjct: 64  IESGKIMF---EGS--DLLEIDEEVFRREFRWKKISMIFQNSMNAFSPVHRIQDQLLDVA 118

Query: 127 EVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGISNNPRIL 186
                 KS  E ++   + L+   I +    +  YPHELSGG +QRV IG+ +  +P I+
Sbjct: 119 RKCFPNKSRNELLEIIKEKLRIANIDESV--LKKYPHELSGGQRQRVAIGMALLADPEIV 176

Query: 187 IADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYAGKIVEI 246
           IADEPTT LDV  Q QIL+ L ++++    T++LITH++ VVA  +  V V+YAGK++E 
Sbjct: 177 IADEPTTGLDVVTQYQILNRLKEIQKDLGITLLLITHDVSVVAALSTDVLVLYAGKVLEY 236

Query: 247 GTVDQIFKNPLHPYTQGLLRAVPNPLTKIEKLEAIPGTVPNLITPPGGCRFHPRCPKVMS 306
           G + ++FKN  HPYT  LLR+ P      EKL  IPG+ P+L  PP GC FHPRCP    
Sbjct: 237 GDIKRVFKNSHHPYTYLLLRSYPE--MGKEKLYEIPGSPPDLRNPPSGCVFHPRCPYATD 294

Query: 307 ICKEKVPELKEIEPGHFVACH 327
           +C+++ P+L EIE GHF ACH
Sbjct: 295 LCRKEEPKLVEIEEGHFSACH 315


>pir||JC5009 nucleotide-binding protein D - Methanosarcina mazei
           >gi|1491738|emb|CAA62801.1| (X91502) ABC transporter
           [Methanosarcina mazei]
           Length = 317
           
 Score =  238 bits (602), Expect = 5e-62
 Identities = 140/324 (43%), Positives = 196/324 (60%), Gaps = 14/324 (4%)

Query: 6   EPILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIESP 65
           + +L+V+NL V F      V A+  +SF + + ET ALVGETGCGKSV + AI +L+  P
Sbjct: 7   DKLLEVKNLQVSFLGIK-TVTALSGISFSIGERETLALVGETGCGKSVAAHAIMRLLP-P 64

Query: 66  GRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQIAEA 125
              V+G V     +    +LL LSE+E+ +IRG EI  IFQ+P  +L+P+Y++G+Q+AE 
Sbjct: 65  ESGVKGTV-----ELRGRNLLGLSEKEMTEIRGKEIGIIFQNPSLALNPVYSIGHQLAEP 119

Query: 126 MEVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGISNNPRI 185
           + +H K K  K+ + +A + LK++   +    +N YP   SGGM QR +I      +P +
Sbjct: 120 LRLHRKEKK-KKALSRAAEALKNMGFANTGEIINYYPSWCSGGMNQRFLIAASTILDPAL 178

Query: 186 LIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYAGKIVE 245
           LIADEP   LD +  +++   L ++KE+ K  ++LI+H+LG V   ADRVAVMYAG+IVE
Sbjct: 179 LIADEPGKGLDRSCLSELEAGLKRLKEEKKTALLLISHDLGFVRNLADRVAVMYAGEIVE 238

Query: 246 IGTVDQIFKNPLHPYTQGLLRAVPNPLTKIEKLEAIPGTVPNLITPPGGCRFHPRCPKVM 305
           I     IF+ PLHPYT+GLL ++P      +    IPG  P L   P GCRFHPRCP   
Sbjct: 239 IADSSGIFEEPLHPYTKGLLNSLPE-----KGFIPIPGFSPPLSRLPSGCRFHPRCPLRK 293

Query: 306 SICKEKVPELKEIEPGHFVACHLY 329
             C E  PE+ E   G  V C LY
Sbjct: 294 RCCIENQPEIIETN-GRAVRCFLY 316


>emb|CAC16446.1| (AL450165) putative oligopeptide ABC transporter ATP-binding
           protein [Streptomyces coelicolor]
           Length = 288
           
 Score =  238 bits (602), Expect = 5e-62
 Identities = 131/265 (49%), Positives = 175/265 (65%), Gaps = 7/265 (2%)

Query: 6   EPILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIESP 65
           +P+L++  L+V F+    +V A+  VS  V  GET A+VGE+G GKS T+ ++ +L  SP
Sbjct: 25  QPLLEIDGLSVDFHLAGSVVHAVRDVSLHVRAGETLAVVGESGSGKSATALSVLRLNPSP 84

Query: 66  GRI-VEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQIAE 124
             +   G++   R DG   DLL+LSE+E+ ++RG +IA +FQDP   LDPL  VG Q+AE
Sbjct: 85  PCVYASGEI---RFDGR--DLLRLSEKELGRVRGRDIAMVFQDPMTCLDPLQRVGAQVAE 139

Query: 125 AMEVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGISNNPR 184
            +  H  + S  E  + A+  L  V IPDPA R   YPHELSGG++QRV+I   +   PR
Sbjct: 140 VLRHHTGM-SRAEAAKAALAALDEVGIPDPALRYRQYPHELSGGLRQRVMIATALVARPR 198

Query: 185 ILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYAGKIV 244
           +LIADEPTTALDVT+Q QILDLL  ++ K+   V+LITH+L VVAETADRV VM+ GK+V
Sbjct: 199 VLIADEPTTALDVTVQRQILDLLVTLQHKHDMGVVLITHDLAVVAETADRVVVMHRGKVV 258

Query: 245 EIGTVDQIFKNPLHPYTQGLLRAVP 269
           E G V  +F  P   YT+ LL A P
Sbjct: 259 ETGDVLDVFDRPADDYTRRLLAATP 283


>pir||F71211 probable oligopeptide transport ATP-binding protein appF -
           Pyrococcus horikoshii >gi|3258402|dbj|BAA31085.1|
           (AP000007) 335aa long hypothetical oligopeptide
           transport ATP-binding protein appF [Pyrococcus
           horikoshii]
           Length = 335
           
 Score =  238 bits (600), Expect = 9e-62
 Identities = 136/339 (40%), Positives = 196/339 (57%), Gaps = 28/339 (8%)

Query: 6   EPILQVRNLTVHFYTYAGI-----------VKAIEKVSFDVYKGETFALVGETGCGKSVT 54
           EPIL+V NL  +F    G            VKA++ VSF++YK + FALVGE+GCGK+ T
Sbjct: 3   EPILKVENLKKYFPVRRGFLSALRGEPQKFVKAVDGVSFEIYKQQVFALVGESGCGKTTT 62

Query: 55  SRAITQLIE-SPGRI-VEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASL 112
            + I +L+E + G+I +EGQ           D+ +L  +E  K    ++  IFQDP +S+
Sbjct: 63  GKLIVKLLEPTDGKIYLEGQ-----------DVTELRTKEEIKAYRRKVQMIFQDPFSSM 111

Query: 113 DPLYTVGYQIAEAMEVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQR 172
           +P + +   + E + +HG  ++  E  +     L+ V I  P   V  +PH LSGG +QR
Sbjct: 112 NPRFRIYDVLEEPLLIHGIGETRAEREELIYKALEMVKITPPEEYVGRFPHMLSGGQRQR 171

Query: 173 VVIGIGISNNPRILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETA 232
           V I   +  NP  ++ADEP + LDV+I+A+IL+L+ ++KEK   T + ITH+L      A
Sbjct: 172 VAIARALILNPTFVVADEPVSMLDVSIRAEILELMKELKEKMGVTYLYITHDLSTARYFA 231

Query: 233 DRVAVMYAGKIVEIGTVDQIFKNPLHPYTQGLLRAVPNPLTK---IEKLEAIPGTVPNLI 289
           D +AVMY G+IVE+G   +I  NPLHPYT+ LL AVP P+ +   + K   I G VP+ +
Sbjct: 232 DWIAVMYLGRIVEMGPAKEIIDNPLHPYTRALLAAVPEPIPERKDVIKELPIKGEVPSAV 291

Query: 290 TPPGGCRFHPRCPKV-MSICKEKVPELKEIEPGHFVACH 327
             P GCRFHPRC      +C  K P+L E    H+V CH
Sbjct: 292 NIPSGCRFHPRCIYFKKGLCDVKQPQLIEYSHNHWVECH 330


>pir||G75202 dipeptide abc transporter, dipeptide-binding protein PAB0095 -
           Pyrococcus abyssi (strain Orsay)
           >gi|5457579|emb|CAB49070.1| (AJ248283) dipeptide ABC
           transporter, dipeptide-binding protein [Pyrococcus
           abyssi]
           Length = 345
           
 Score =  236 bits (597), Expect = 2e-61
 Identities = 130/325 (40%), Positives = 197/325 (60%), Gaps = 22/325 (6%)

Query: 13  NLTVHFYTYAGIVK-------AIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIESP 65
           NL  +F    G+ K       A++ +S ++ KGETF L GE+GCGKS   R + +LIE  
Sbjct: 11  NLKKYFPVRGGLFKQKNLYVHAVDGISINIRKGETFGLAGESGCGKSTFGRLLLRLIEP- 69

Query: 66  GRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQIAEA 125
               EG + +   DG  +D+ KL ++E+RK+R   +  +FQDP +SL+P  T+   +   
Sbjct: 70  ---TEGSIYF---DG--IDITKLDKDEMRKLR-RRMGIVFQDPKSSLNPRMTIYDTLKRP 120

Query: 126 MEVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGISNNPRI 185
           +E+H   +S +E   K V+IL++V + +    ++ YPHELSGG  QRV I   I  NP  
Sbjct: 121 LEIHRLAESEEEKYDKIVEILEAVGLGE--EHLSRYPHELSGGQLQRVSIARAIITNPDF 178

Query: 186 LIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYAGKIVE 245
           ++ DEPT+ALD+++QAQIL+LL  ++ K+  T + I+H++ V+   +DR+ +MY GK+VE
Sbjct: 179 VVLDEPTSALDISVQAQILNLLVNLQRKFNLTYLFISHDISVLQYMSDRIGIMYLGKVVE 238

Query: 246 IGTVDQIFKNPL-HPYTQGLLRAVP--NPLTKIEKLEAIPGTVPNLITPPGGCRFHPRCP 302
           I ++D   K  + HPYT  LL + P  +P  +  +   + G VP+ I  P GCRFH RCP
Sbjct: 239 ILSIDDFRKGEIYHPYTAYLLLSTPALHPSKRTSRKVILTGEVPSPINVPPGCRFHVRCP 298

Query: 303 KVMSICKEKVPELKEIEPGHFVACH 327
            V   CK++ P L EI+  H+VACH
Sbjct: 299 FVTQKCKDEEPPLVEIKKDHYVACH 323


>sp|Q07733|OPPD_LACLA OLIGOPEPTIDE TRANSPORT ATP-BINDING PROTEIN OPPD
           >gi|1075749|pir||A53290 oligopeptide transport protein
           oppD - Lactococcus lactis subsp. lactis
           >gi|308850|gb|AAA16163.1| (L18760) ATP binding protein
           [Lactococcus lactis]
           Length = 338
           
 Score =  236 bits (596), Expect = 3e-61
 Identities = 138/321 (42%), Positives = 201/321 (61%), Gaps = 8/321 (2%)

Query: 6   EPILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIESP 65
           E IL+ + ++V F       KAI  +   + +GE  A+VGE+G GKS  + A+  L    
Sbjct: 4   ENILEAKQVSVAFRIAGKFQKAIYDIDLSLKRGEVLAIVGESGSGKSTFATAVMGLHNPN 63

Query: 66  GRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQIAEA 125
              + G +L   DD  V+     + + +  IRG+++  IFQ+P  +L+PL  +G QI E 
Sbjct: 64  QTQITGSILL--DDEEVIGK---TGDSMASIRGSKVGMIFQNPLTALNPLMKIGQQIKEM 118

Query: 126 MEVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGISNNPRI 185
           + VH  +    +   +   +L+ V IP+P R VN +PH+LSGGM+QRV+I I I+N+P +
Sbjct: 119 LAVHD-VYPENQYESRIFQLLEQVGIPNPKRVVNQFPHQLSGGMRQRVMIAIAIANDPDL 177

Query: 186 LIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYAGKIVE 245
           +IADEPTTALDVTIQAQILDL+ ++++K  A VILITH+LGVVAE AD VAVMYAG++VE
Sbjct: 178 IIADEPTTALDVTIQAQILDLILEIQKKKNAGVILITHDLGVVAEVADTVAVMYAGQLVE 237

Query: 246 IGTVDQIFKNPLHPYTQGLLRAVPNPLTKIEKLEAIPGTVPNLI-TPPGGCRFHPRCPKV 304
             +V+++F+NP HPYT+ LLR+ P+  T  + L  IPG+VP+L         F  R P +
Sbjct: 238 KTSVEELFQNPKHPYTRSLLRSNPSAETVSDDLYVIPGSVPSLSKIEYDKDLFLARVPWM 297

Query: 305 MSICKEKVPE-LKEIEPGHFV 324
               ++ + E + EI   HFV
Sbjct: 298 KEEAQKVISEKMTEISSNHFV 318


>sp|P50980|OPPD_LACLC OLIGOPEPTIDE TRANSPORT ATP-BINDING PROTEIN OPPD
           >gi|495177|gb|AAB00533.1| (U09553) ATP binding protein
           [Lactococcus lactis]
           Length = 338
           
 Score =  236 bits (596), Expect = 3e-61
 Identities = 135/321 (42%), Positives = 201/321 (62%), Gaps = 8/321 (2%)

Query: 6   EPILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIESP 65
           E IL+ + ++V F       KAI  +   + +GE  A+VGE+G GKS  + A+  L    
Sbjct: 4   ENILEAKQVSVAFRIAGKFQKAIYDIDLSLRRGEVLAIVGESGSGKSTLATAVMGLHNPN 63

Query: 66  GRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQIAEA 125
              + G +L   ++     ++  + + +  IRG+++  IFQ+P  +L+PL  +G QI E 
Sbjct: 64  QTQITGSILLDEEE-----VIGKTGDSMASIRGSKVGMIFQNPLTALNPLMKIGQQIKEM 118

Query: 126 MEVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGISNNPRI 185
           + VH  +    +   +   +L+ V IP+P R VN +PH+LSGGM+QRV+I I I+N+P +
Sbjct: 119 LAVHD-VYPENQYESRIFQLLEQVGIPNPKRVVNQFPHQLSGGMRQRVMIAIAIANDPDL 177

Query: 186 LIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYAGKIVE 245
           +IADEPTTALDVTIQAQILDL+ ++++K  A VILITH+LGVVAE AD VAVMYAG++VE
Sbjct: 178 IIADEPTTALDVTIQAQILDLILEIQKKKNAGVILITHDLGVVAEVADTVAVMYAGQLVE 237

Query: 246 IGTVDQIFKNPLHPYTQGLLRAVPNPLTKIEKLEAIPGTVPNLI-TPPGGCRFHPRCPKV 304
             +V+++F+NP HPYT+ LLR+ P+  T  + L  IPG+VP+L         F  R P +
Sbjct: 238 KASVEELFQNPKHPYTRSLLRSNPSAETVSDDLYVIPGSVPSLSEIEYDKDLFLARVPWM 297

Query: 305 MSICKEKVPE-LKEIEPGHFV 324
               ++ + E + EI   HFV
Sbjct: 298 KEEAQKVISEKMTEISSNHFV 318


>pir||C81746 peptide ABC transporter, ATP-binding protein TC0062 [imported] -
           Chlamydia muridarum (strain Nigg)
           >gi|7190098|gb|AAF38947.1| (AE002273) peptide ABC
           transporter, ATP-binding protein [Chlamydia muridarum]
           Length = 321
           
 Score =  236 bits (595), Expect = 3e-61
 Identities = 124/324 (38%), Positives = 195/324 (59%), Gaps = 7/324 (2%)

Query: 6   EPILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIESP 65
           +P+LQV+NL+V           +E +SF+V+ G+T A++GE+G GKS+T++++ QL+   
Sbjct: 4   QPLLQVKNLSVSLNRNTVSFPVVEDLSFNVFPGQTLAIIGESGSGKSITAQSLMQLLPEE 63

Query: 66  GRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQIAEA 125
              + G+   ++++     LL       + + G+++A IFQ+P AS DP++T+  Q  E 
Sbjct: 64  YFSISGEAFLHKEN-----LLDRKNLLSKTLFGSKMAMIFQNPLASFDPVFTIEQQFHEV 118

Query: 126 MEVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGISNNPRI 185
           +  H  +   K   ++ V +L+     DP R +  YPHELSGGM QR+ I + +  +P +
Sbjct: 119 IRTHLDLTK-KVAHEQIVTVLRETGFQDPERCIKLYPHELSGGMLQRMAIAMTLLTSPDL 177

Query: 186 LIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYAGKIVE 245
           LIADEPTTALDV++Q QIL LL  +++K   ++++ITH++GVVAE AD V V+YAG++ E
Sbjct: 178 LIADEPTTALDVSVQYQILQLLKTLQKKTGMSLLVITHDMGVVAEMADDVFVLYAGRMAE 237

Query: 246 IGTVDQIFKNPLHPYTQGLLRAVPNPLTKIEKLEAIPGTVPNLITPPGGCRFHPRCPKVM 305
             +V  IF +P HPYT+ LL + P+   K +    I G  P+    P GC + PRC K +
Sbjct: 238 YSSVQDIFHSPAHPYTKDLLASRPSQYKK-QTFVPISGHPPHYTNLPKGCCYSPRCQKAL 296

Query: 306 SICKEKVPELKEIEPGHFVACHLY 329
            IC ++ P    +   H V C LY
Sbjct: 297 PICYKQSPHAISLNDHHHVRCWLY 320


>pir||F75026 oligopeptide transport ATP-binding protein appf. PAB1197 -
           Pyrococcus abyssi (strain Orsay)
           >gi|5459166|emb|CAB50652.1| (AJ248288) OLIGOPEPTIDE
           TRANSPORT ATP-BINDING PROTEIN APPF. [Pyrococcus abyssi]
           Length = 335
           
 Score =  235 bits (593), Expect = 6e-61
 Identities = 133/339 (39%), Positives = 195/339 (57%), Gaps = 28/339 (8%)

Query: 6   EPILQVRNLTVHFYTYAGI-----------VKAIEKVSFDVYKGETFALVGETGCGKSVT 54
           EPIL+V NL  +F    G            V+A++ +SF+VYK + FALVGE+GCGK+ T
Sbjct: 3   EPILKVENLKKYFPIRRGFLASLRGEPQQFVRAVDGISFEVYKQQVFALVGESGCGKTTT 62

Query: 55  SRAITQLIE-SPGRI-VEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASL 112
            + + +L+E + G+I +EGQ           D+ +L  +E  K     +  IFQDP +S+
Sbjct: 63  GKLVVKLLEPTDGKIYLEGQ-----------DVTQLRTKEEIKAYRRRVQMIFQDPFSSM 111

Query: 113 DPLYTVGYQIAEAMEVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQR 172
           +P + +   + E + +HG  ++  E  +     L+ V I  P   V  +PH LSGG +QR
Sbjct: 112 NPRFRIYDVLEEPLLIHGIGETRAEREELIYKALEMVKITPPEEYVGRFPHMLSGGQRQR 171

Query: 173 VVIGIGISNNPRILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETA 232
           V I   +  NP  ++ADEP + LDV+I+A+IL+L+ ++KEK   T + ITH+L      A
Sbjct: 172 VAIARALILNPTFIVADEPVSMLDVSIRAEILELMKELKEKMGVTYLYITHDLSTARYFA 231

Query: 233 DRVAVMYAGKIVEIGTVDQIFKNPLHPYTQGLLRAVPNPLTK---IEKLEAIPGTVPNLI 289
           D +AVMY G+IVE+G   ++  NPLHPYT+ LL AVP P+ +   + K   I G VP+ +
Sbjct: 232 DWIAVMYLGRIVEMGPAKEVIDNPLHPYTRALLAAVPEPIPERKDVIKELPIKGEVPSAV 291

Query: 290 TPPGGCRFHPRCPKV-MSICKEKVPELKEIEPGHFVACH 327
             P GCRFHPRC      +C  K P+L E    H+V CH
Sbjct: 292 NIPPGCRFHPRCVYFKKGLCDTKEPKLIEYSHNHWVECH 330


>gb|AAG22038.1|AF305387_5 (AF305387) OppF [Bacillus thuringiensis]
           Length = 311
           
 Score =  235 bits (592), Expect = 8e-61
 Identities = 130/326 (39%), Positives = 197/326 (59%), Gaps = 28/326 (8%)

Query: 1   MRKVPEPILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQ 60
           M K  E +++V+N+  HF    G+VKA+  +SFD+Y+GETF LVGE+GCGKS T R I +
Sbjct: 1   MTKQREKLIEVKNVKQHFDVSGGVVKAVNDISFDIYRGETFGLVGESGCGKSTTGRTIIR 60

Query: 61  LIESPGRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGY 120
           L ++      G+VL+   DG  V   K S  E++K    ++  IFQDP+ASL+P  TVG 
Sbjct: 61  LYDATA----GEVLF---DGENVHGKK-SRAELKKFN-RKMQMIFQDPYASLNPRMTVGD 111

Query: 121 QIAEAMEVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGIS 180
            IAE +++HG  KS KE + +  ++L +V +       N +PHE SGG +QR+ I   ++
Sbjct: 112 IIAEGIDIHGLAKSKKERMDRVHELLNTVGLNK--EHANRFPHEFSGGQRQRIGIARALA 169

Query: 181 NNPRILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYA 240
             P  +IADEP +ALDV+IQAQ+++LL K++++   T + I H+L +V   +DR+ VMY 
Sbjct: 170 VEPEFIIADEPISALDVSIQAQVVNLLKKLQKEKGLTYLFIAHDLSMVKYISDRIGVMYR 229

Query: 241 GKIVEIGTVDQIFKNPLHPYTQGLLRAVPNPLTKIEKLEAIPGTVPNLITPPGGCRFHPR 300
           G+IVE+ T ++++ NP+HPYT+ LL A+P P    E+          ++  P    +   
Sbjct: 230 GQIVELTTSEELYANPVHPYTKSLLSAIPLPDPDYER------NRKRIVYDPSQHDY--- 280

Query: 301 CPKVMSICKEKVPELKEIEPGHFVAC 326
                     +VP ++EI PGHFV C
Sbjct: 281 --------GREVPTMREIRPGHFVLC 298


>gb|AAG10493.1|AF279106_55 (AF279106) predicted ABC transporter ATPase subunit [uncultured
           proteobacterium EBAC31A08]
           Length = 532
           
 Score =  231 bits (584), Expect = 7e-60
 Identities = 123/266 (46%), Positives = 176/266 (65%), Gaps = 8/266 (3%)

Query: 8   ILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIESPGR 67
           IL+V +L+++F T  G+  A++ +SFD+ K +T ALVGE+G GKSVT+ +I QL++ P  
Sbjct: 4   ILEVSDLSINFSTRDGLFNAVDNISFDIEKNQTLALVGESGSGKSVTAMSILQLLQKPQA 63

Query: 68  IV--EGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQIAEA 125
               E  + +  D+     ++    E++  +RGN I+ IFQ+P  SL+P + VG QI E+
Sbjct: 64  SYSKESSIKFNGDE-----IINAKYEKLLSLRGNIISMIFQEPMTSLNPYHRVGNQITES 118

Query: 126 MEVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGISNNPRI 185
           + +H K  S K+ I +A  ++  V I D  RR   YPHELSGG +QRV+I + + N P +
Sbjct: 119 ILLHSK-SSKKDAIDEAKKLMALVEIDDVERRFYAYPHELSGGQRQRVMIAMALVNKPEL 177

Query: 186 LIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYAGKIVE 245
           LIADEPTTALDVTIQAQILDL++K+K +   +++ ITH+LG+V E +D V VM  GKIVE
Sbjct: 178 LIADEPTTALDVTIQAQILDLMSKLKNELGMSILFITHDLGLVQEFSDNVCVMKNGKIVE 237

Query: 246 IGTVDQIFKNPLHPYTQGLLRAVPNP 271
            G   ++F NP H YT+ LL A P P
Sbjct: 238 QGNTVEVFNNPSHEYTKKLLDAEPQP 263


 Score =  166 bits (417), Expect = 3e-40
 Identities = 98/269 (36%), Positives = 153/269 (56%), Gaps = 22/269 (8%)

Query: 6   EPILQVRNLTVHF------YTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAIT 59
           EPI+++ +L V++      +       A++  SF +YK  T  LVGE+G GKS   +AI 
Sbjct: 272 EPIIEINDLNVYYSIPSTNFFKKNTFHAVKNTSFSIYKNTTIGLVGESGSGKSTLGKAIA 331

Query: 60  QLIESPGRI-VEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTV 118
            L+   G I  EG+           D+   S++E ++++ N +  +FQDP+ SL P  TV
Sbjct: 332 NLVSYKGNIKFEGR-----------DINSNSQKENKELKKN-VQIVFQDPYGSLSPRMTV 379

Query: 119 GYQIAEAMEVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIG 178
           G  + E + VH K+   KE  ++   +L  V I   A+  N YPHE SGG +QR+ I   
Sbjct: 380 GEIVGEGLGVHFKLTK-KERDERIDKVLSDVGIEIVAK--NKYPHEFSGGQRQRIAIARS 436

Query: 179 ISNNPRILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVM 238
           +  NP  +I DEPT+ALD +IQ Q++DLL +++ +Y  T + I+H+L V+   +D + VM
Sbjct: 437 LIMNPAFMILDEPTSALDRSIQIQVIDLLKEIQNEYGLTYLFISHDLKVIRSMSDFIFVM 496

Query: 239 YAGKIVEIGTVDQIFKNPLHPYTQGLLRA 267
             G+IVE G   ++F++P   YT+ LL A
Sbjct: 497 KNGEIVESGPSHKVFESPEQDYTKKLLSA 525


>pir||C72371 oligopeptide ABC transporter, ATP-binding protein - Thermotoga
           maritima (strain MSB8)
           >gi|4981011|gb|AAD35585.1|AE001726_19 (AE001726)
           oligopeptide ABC transporter, ATP-binding protein
           [Thermotoga maritima]
           Length = 384
           
 Score =  231 bits (584), Expect = 7e-60
 Identities = 136/378 (35%), Positives = 204/378 (52%), Gaps = 62/378 (16%)

Query: 8   ILQVRNLTVHFYTYAGI-------VKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQ 60
           IL+V NL  HF   AG+       VKA++ VSF + +GETF LVGE+GCGK+     + +
Sbjct: 5   ILRVENLVKHFPIRAGVFKRIVGWVKAVDGVSFSINEGETFGLVGESGCGKTTIGMTLLR 64

Query: 61  LIE-SPGRIV---EGQVLYYRDDGSVVDLLK---------LSEEEIRKIRG--------- 98
           L E + GRI+   E    Y+         +K         + E ++ K+ G         
Sbjct: 65  LYEPTSGRIIVDNEDTTYYFMPRSKAKKYIKQTYLSRFVNMKESDVEKLEGVDREYARIF 124

Query: 99  ---------------------------NEIAYIFQDPHASLDPLYTVGYQIAEAMEVHGK 131
                                       E+  +FQDP++SL+P   V   + E +  H +
Sbjct: 125 FEEAKGSPKKFMSILLDDLPEKRKKFRREMQIVFQDPYSSLNPRLRVKSIVGEGIVTH-R 183

Query: 132 IKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGISNNPRILIADEP 191
           I   KE  ++  +IL+ V IP  +  V  +PHE SGG +QR+ I   ++  P++++ADE 
Sbjct: 184 IARGKEVEKRIKEILEDVGIP--SAYVYRFPHEFSGGQRQRIGIARALALEPKLVVADEA 241

Query: 192 TTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYAGKIVEIGTVDQ 251
             ALDV+I++QI++L+  ++ ++K T I I+H+L VV   +DR+ VMY GK+VE+     
Sbjct: 242 VAALDVSIRSQIINLMEDLQREHKLTYIFISHDLAVVKHISDRIGVMYLGKMVELAPKKD 301

Query: 252 IFKNPLHPYTQGLLRA--VPNPLTKIEKLEAIPGTVPNLITPPGGCRFHPRCPKVMSICK 309
           +F+ PLHPYT  L+ A  VP+P  K E++  + G VP+ I PP GCRFH RCP    IC 
Sbjct: 302 LFEKPLHPYTVALMSAIPVPDPTKKRERI-ILKGDVPSPINPPSGCRFHTRCPIAKEICS 360

Query: 310 EKVPELKEIEPGHFVACH 327
           ++ P  +E+E GHFVACH
Sbjct: 361 KEEPAFREVEEGHFVACH 378


>sp|P77268|YDDP_ECOLI HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PROTEIN YDDP
           >gi|7445758|pir||G64901 ABC-type transport protein b1484
           - Escherichia coli >gi|1742424|dbj|BAA15139.1| (D90789)
           Dipeptide transport ATP-binding protein DppD.
           [Escherichia coli] >gi|1742435|dbj|BAA15149.1| (D90790)
           Dipeptide transport ATP-binding protein DppD.
           [Escherichia coli] >gi|1787759|gb|AAC74557.1| (AE000245)
           putative ATP-binding component of a transport system
           [Escherichia coli K12]
           Length = 328
           
 Score =  231 bits (583), Expect = 9e-60
 Identities = 127/311 (40%), Positives = 184/311 (58%), Gaps = 8/311 (2%)

Query: 6   EPILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIESP 65
           +P+L ++ L + F  + G V A+  VS  + +GE   LVGE+G GKSVT+  I +L+ + 
Sbjct: 3   QPVLDIQQLHLSFPGFNGDVHALNNVSLQINRGEIVGLVGESGSGKSVTAMLIMRLLPTG 62

Query: 66  GRIVE-GQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQIAE 124
              V  GQ+    +D     +L   E+++R+ RG  +A IFQ+P  +L+P   +G Q+ +
Sbjct: 63  SYCVHRGQISLLGED-----VLNAREKQLRQWRGARVAMIFQEPMTALNPTRRIGLQMMD 117

Query: 125 AMEVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGISNNPR 184
            +  H  I S +E   KA+D+L+ + IPD    ++ YP ELSGGM+QRV+I +  S  P+
Sbjct: 118 VIRHHQPI-SRREARAKAIDLLEEMQIPDAVEVMSRYPFELSGGMRQRVMIALAFSCEPQ 176

Query: 185 ILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYAGKIV 244
           ++IADEPTTALDVT+Q Q+L LL          V+ I+H++ VV++  D V VMYAG ++
Sbjct: 177 LIIADEPTTALDVTVQLQVLRLLKHKARASGTAVLFISHDMAVVSQLCDSVYVMYAGSVI 236

Query: 245 EIGTVDQIFKNPLHPYTQGLLRAVPNPLTKIEKLEAIPGTVPNLITPPGGCRFHPRCPKV 304
           E G    +  +P HPYT GLL+  P      + L AIPGTVPNL   P GC F  RC   
Sbjct: 237 ESGVTADVIHHPRHPYTIGLLQCAPEHGVPRQLLPAIPGTVPNLTHLPDGCAFRDRCYAA 296

Query: 305 MSICKEKVPEL 315
            + C E VP L
Sbjct: 297 GAQC-ENVPAL 306


>pir||B82393 ABC transporter, ATP-binding protein VCA0977 [imported] - Vibrio
           cholerae (group O1 strain N16961)
           >gi|9658417|gb|AAF96873.1| (AE004424) ABC transporter,
           ATP-binding protein [Vibrio cholerae]
           Length = 539
           
 Score =  231 bits (582), Expect = 1e-59
 Identities = 118/278 (42%), Positives = 177/278 (63%), Gaps = 5/278 (1%)

Query: 5   PEPILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIES 64
           P P+LQVRNL+V F T  G+V A++ VSFD+  GET A+VGE+G GKSV++ A+ QL+  
Sbjct: 3   PNPLLQVRNLSVSFTTNDGVVDAVKNVSFDIRPGETLAIVGESGSGKSVSTNALMQLLPK 62

Query: 65  PGRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQIAE 124
             RI     + +  +    +LL  ++ ++R+IRG+ I  IFQ+P  SL+P   VG Q+AE
Sbjct: 63  NARIHPESSIMFEGE----ELLNKTDTQMRRIRGDRIGMIFQEPMTSLNPYMRVGVQVAE 118

Query: 125 AMEVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGISNNPR 184
           A+  H  + S  +  Q+ +++ + V +PDP      +PHE SGG  QR++I + + N P 
Sbjct: 119 AIRCHRNV-SQNQAKQRVLELFQLVHLPDPKGAYQKFPHEFSGGQLQRIMIAMALINEPD 177

Query: 185 ILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYAGKIV 244
           ILIADEPTTALDVT+QA++L L+ +++      ++ ITH+LGVV   ADRV VM  G +V
Sbjct: 178 ILIADEPTTALDVTVQAEVLRLIKEIQANMGMAILFITHDLGVVKFVADRVLVMCKGDVV 237

Query: 245 EIGTVDQIFKNPLHPYTQGLLRAVPNPLTKIEKLEAIP 282
           E G+ +Q+F  P H YT+ L+ ++P        ++A P
Sbjct: 238 EQGSTEQLFLQPEHDYTRMLINSIPKGSKDPVAVDAAP 275


 Score =  160 bits (400), Expect = 3e-38
 Identities = 95/269 (35%), Positives = 153/269 (56%), Gaps = 22/269 (8%)

Query: 7   PILQVRNLTVHFYTYAGIV-------KAIEKVSFDVYKGETFALVGETGCGKSVTSRAIT 59
           P+L+  ++ V F      +       +A++ +S ++ +GET  +VGE+G GKS   RA+ 
Sbjct: 275 PLLKAEDIRVKFLVKPYFISRRNQYFEAVKGISLELKQGETLGIVGESGSGKSTLGRALI 334

Query: 60  QLIESPGRIV-EGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTV 118
            L+ S G+I  +GQ           D   LSE++   ++  +I  +FQDP+ SL P  TV
Sbjct: 335 GLLPSTGQIAFKGQ-----------DFRALSEKQRLALK-KDIQMVFQDPYGSLSPRMTV 382

Query: 119 GYQIAEAMEVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIG 178
           G  I E + VH    S  E +Q+A   L+ V + DP   +N YPHE SGG +QR+ I   
Sbjct: 383 GEIITEGLLVHQPHISKLERMQRARRALEEVRL-DP-NSINRYPHEFSGGQRQRIAIARA 440

Query: 179 ISNNPRILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVM 238
           +   P  ++ DEPT+ALD ++Q  +++LL +++++     + I+H+L VV   +DRV VM
Sbjct: 441 LILEPSFILLDEPTSALDRSVQLTVIELLKEIQKRRNIGYLFISHDLAVVKALSDRVLVM 500

Query: 239 YAGKIVEIGTVDQIFKNPLHPYTQGLLRA 267
             G+++E G+ + IF NP H YT+ L+ A
Sbjct: 501 QKGQVMEQGSAESIFHNPQHEYTKKLIAA 529


>emb|CAA39791.1| (X56347) OppF [Bacillus subtilis]
           Length = 307
           
 Score =  230 bits (581), Expect = 1e-59
 Identities = 126/326 (38%), Positives = 197/326 (59%), Gaps = 28/326 (8%)

Query: 1   MRKVPEPILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQ 60
           M ++ E +L++++L  HF T  G VKA++ +SFD+YKGET  LVGE+GCGKS T R+I +
Sbjct: 1   MNELTEKLLEIKHLKQHFVTPRGTVKAVDDLSFDIYKGETLGLVGESGCGKSTTGRSIIR 60

Query: 61  LIESPGRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGY 120
           L E+     +G+VL+  ++       K   E  RK++      IFQDP+ASL+P  TV  
Sbjct: 61  LYEA----TDGEVLFNGENVHGRKSRKKLLEFNRKMQ-----MIFQDPYASLNPRMTVAD 111

Query: 121 QIAEAMEVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGIS 180
            IAE +++H   K+ KE +Q+  ++L++V +       N YPHE SGG +QR+ I   ++
Sbjct: 112 IIAEGLDIHKLAKTKKERMQRVHELLETVGLNK--EHANRYPHEFSGGQRQRIGIARALA 169

Query: 181 NNPRILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYA 240
            +P  +IADEP +ALDV+IQAQ+++L+ +++++   T + I H+L +V   +DR+ VMY 
Sbjct: 170 VDPEFIIADEPISALDVSIQAQVVNLMKELQKEKGLTYLFIAHDLSMVKYISDRIGVMYF 229

Query: 241 GKIVEIGTVDQIFKNPLHPYTQGLLRAVPNPLTKIEKLEAIPGTVPNLITPPGGCRFHPR 300
           GK+VE+   D++++NPLHPYT+ LL A+P P    E+                  R    
Sbjct: 230 GKLVELAPADELYENPLHPYTKSLLSAIPLPDPDYER-----------------NRCSEY 272

Query: 301 CPKVMSICKEKVPELKEIEPGHFVAC 326
            P V  +   +  E +E++PGHFV C
Sbjct: 273 DPSVHQLKDGETMEFREVKPGHFVMC 298


>pir||D72393 oligopeptide ABC transporter, ATP-binding protein - Thermotoga
           maritima (strain MSB8)
           >gi|4980803|gb|AAD35391.1|AE001712_4 (AE001712)
           oligopeptide ABC transporter, ATP-binding protein
           [Thermotoga maritima]
           Length = 328
           
 Score =  230 bits (581), Expect = 1e-59
 Identities = 117/325 (36%), Positives = 197/325 (60%), Gaps = 9/325 (2%)

Query: 6   EPILQVRNLTVHFYTYAG----IVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQL 61
           E I    NL  +++  +G     ++A++ VS   ++ E + + GE+GCGKS   + +   
Sbjct: 2   EKIAVAENLRAYYFIKSGDKTTSIRAVDNVSLHFFENEVYGIAGESGCGKSTLLKVLFGE 61

Query: 62  IESPGRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQ 121
           I+ P ++V+G+V++ + DG    +  +S ++++KIR   ++Y+ Q   + L+P+  +   
Sbjct: 62  IKPPLKLVDGEVVF-KLDGEEYRINSMSLDQLKKIRWKYVSYVPQGSMSVLNPVRKIRRI 120

Query: 122 IAEAMEVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGISN 181
             + +E H  + S +E   +     +++ +P   R +++YPH+LSGGM+QRV I +    
Sbjct: 121 FLDVIEEHTSM-SREEAFSRIESYFEALGLP--VRVLDSYPHQLSGGMRQRVTIALATVL 177

Query: 182 NPRILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYAG 241
           NP+++ ADEPTTALDV +Q  ++ LL K+ ++ K T++++TH++GV A  A R+ VMYAG
Sbjct: 178 NPKVIFADEPTTALDVVVQRGVIQLLKKIHKEQKNTLVIVTHDMGVHAHLATRIGVMYAG 237

Query: 242 KIVEIGTVDQIFKNPLHPYTQGLLRAVPNPLTKIEKLEAIPGTVPNLITPPGGCRFHPRC 301
           +++E     +IFKNPLHPYT+ L+ ++P    +  K E  PG+ P+L   P GC FHPRC
Sbjct: 238 RLIEEAETHEIFKNPLHPYTRFLINSLPRFGDRSRK-EGTPGSPPSLANLPSGCPFHPRC 296

Query: 302 PKVMSICKEKVPELKEIEPGHFVAC 326
           P    IC E  P+L E+   H VAC
Sbjct: 297 PIADQICMEMEPDLIEVARNHKVAC 321


>pir||H82355 peptide ABC transporter, ATP-binding protein VC0170 [imported] -
           Vibrio cholerae (group O1 strain N16961)
           >gi|9654573|gb|AAF93346.1| (AE004107) peptide ABC
           transporter, ATP-binding protein [Vibrio cholerae]
           Length = 571
           
 Score =  230 bits (580), Expect = 2e-59
 Identities = 112/274 (40%), Positives = 178/274 (64%), Gaps = 6/274 (2%)

Query: 8   ILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIESPGR 67
           +L+V+NL + + +  G+  A++ ++ D+ +GE   +VGE+G GKS    A+  L+  PG 
Sbjct: 3   LLEVKNLRIEYPSRHGVHAAVKSLTLDIQRGEIVGVVGESGAGKSTVGNAVIDLLSPPGT 62

Query: 68  IVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQIAEAME 127
           I  G+V    +  S      LS + +R++RG++I +IFQDP  SL+PL+TV +Q+ E + 
Sbjct: 63  IAGGEVYLNGEKIS-----GLSPQAMREVRGSKIGFIFQDPMTSLNPLFTVEHQLTETIH 117

Query: 128 VHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGISNNPRILI 187
            + ++ S +E  Q+A+ ++K V IP P  R+  YPH+ SGGM+QRVVI I ++  P ++I
Sbjct: 118 ANMQV-SAEEAYQRALSLMKQVGIPQPENRLKQYPHQFSGGMRQRVVIAIALAGEPDLII 176

Query: 188 ADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYAGKIVEIG 247
           ADEPTTALDV+IQ QIL+L+ ++ +K     +L+TH++GVV+   DRVAVMY G +VE G
Sbjct: 177 ADEPTTALDVSIQDQILNLIRELCKKNNVGCMLVTHDMGVVSNVTDRVAVMYRGDLVEFG 236

Query: 248 TVDQIFKNPLHPYTQGLLRAVPNPLTKIEKLEAI 281
              ++   P HPYT+ L+ AVP    K+++   +
Sbjct: 237 PTAKVLGTPEHPYTRSLISAVPRSDRKLDRFPLV 270


 Score =  174 bits (436), Expect = 2e-42
 Identities = 102/277 (36%), Positives = 159/277 (56%), Gaps = 22/277 (7%)

Query: 2   RKVPEPILQVRNLTVHFYTYAGI-------VKAIEKVSFDVYKGETFALVGETGCGKSVT 54
           RK   P+L+V N+ + F T   +       V+A   VSF V++GETF LVGE+G GKS  
Sbjct: 296 RKYTGPLLKVENVNLRFVTKDSLFESRREYVQASNNVSFAVHEGETFGLVGESGSGKSTI 355

Query: 55  SRAITQLIE-SPGRIV-EGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASL 112
           +R I  L + + GR+  EG           +DL  L  E  R+    ++  +FQ+P+ S+
Sbjct: 356 ARVIAGLYQPNAGRVTFEG-----------IDLTALKSEHERRPLRRQMQMVFQNPYTSM 404

Query: 113 DPLYTVGYQIAEAMEVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQR 172
           +P   +   IAE +  H   +S  E  Q   D+L+ V +   A     YPHE SGG +QR
Sbjct: 405 NPRMKIFDIIAEPIRFHKLTRSESETRQIVNDLLEHVGLGKMAGL--KYPHEFSGGQRQR 462

Query: 173 VVIGIGISNNPRILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETA 232
           + I   ++  PR+LI DEPT+ALDV++QAQIL+LL  ++++   T++ I+H+L V+ +  
Sbjct: 463 ISIARALATRPRLLICDEPTSALDVSVQAQILNLLKDLQDELNLTMLFISHDLPVIRQMC 522

Query: 233 DRVAVMYAGKIVEIGTVDQIFKNPLHPYTQGLLRAVP 269
           DRV VM  G ++E+   +Q+F +P H Y++ L+  +P
Sbjct: 523 DRVGVMQMGTLLEVAPTEQLFTDPQHEYSKKLISLMP 559


>gb|AAG20587.1| (AE005129) dipeptide ABC transporter ATP-binding; DppF
           [Halobacterium sp. NRC-1]
           Length = 943
           
 Score =  230 bits (580), Expect = 2e-59
 Identities = 125/262 (47%), Positives = 164/262 (61%), Gaps = 28/262 (10%)

Query: 73  VLYYRDDGSV--------VDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQIAE 124
           VL  R DG+         VDL    E  +R +RG E+  IFQDP  SL+P  TVG Q+AE
Sbjct: 195 VLRDRPDGAAHVRLTDARVDLTAAPERAMRDLRGGEMGMIFQDPMTSLNPSLTVGEQVAE 254

Query: 125 AMEVH------------GKIKSIKEG------IQKAVDILKSVLIPDPARRVNNYPHELS 166
           ++ +H            G   +I  G      +   VD+L +V IP+P  R++ YPHE S
Sbjct: 255 SLRLHRYGEQPTDSWLNGLRAAISRGDTDEQVVADVVDVLDAVGIPEPETRLDEYPHEFS 314

Query: 167 GGMKQRVVIGIGISNNPRILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLG 226
           GGM+QRV+I I ++  PR+LIADEPTTALDVTIQAQILD ++ +++++  +V+ ITH+LG
Sbjct: 315 GGMRQRVLIAIALACRPRLLIADEPTTALDVTIQAQILDRISDLQDEFGMSVLFITHDLG 374

Query: 227 VVAETADRVAVMYAGKIVEIGTVDQIFKNPLHPYTQGLLRAVPNPLTKIEKLEAIPGTVP 286
           VVAET DRVAVMYAG+IVE G V++IF NP HPYT  LL ++P      ++L  I G VP
Sbjct: 375 VVAETCDRVAVMYAGEIVEEGPVEEIFHNPSHPYTYALLESIPR--DDADRLHPIEGNVP 432

Query: 287 NLITPPGGCRFHPRCPKVMSIC 308
           +LI  P GC F  RCP     C
Sbjct: 433 DLIDLPSGCHFEARCPWASDAC 454


 Score =  229 bits (579), Expect = 3e-59
 Identities = 129/319 (40%), Positives = 192/319 (59%), Gaps = 31/319 (9%)

Query: 6   EPILQVRNLTVHFYTYAGI-----------VKAIEKVSFDVYKGETFALVGETGCGKSVT 54
           EP+L  R L  HF    G            VKA++ V  DVY+GET  LVGE+GCGKS T
Sbjct: 502 EPLLSSRGLEKHFSRADGWLDSMLGGDQEPVKAVDGVDLDVYEGETLGLVGESGCGKSTT 561

Query: 55  SRAITQLIESPGRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDP 114
            R+I +L+E      +G+V++  DD     +  L+++E+R  R  ++  IFQDP +SLDP
Sbjct: 562 GRSILRLVEP----TDGRVVFAGDD-----VTDLNDDELRATR-TDMQMIFQDPLSSLDP 611

Query: 115 LYTVGYQIAEAMEVH------GKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGG 168
             ++G  I E +++H      G   + +    + +D++ +V + DP++  + YPHELSGG
Sbjct: 612 RQSIGDTILEPLQIHDLPANPGAQSTRQARRDRVIDLMDAVGL-DPSQ-YDRYPHELSGG 669

Query: 169 MKQRVVIGIGISNNPRILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVV 228
            +QRV I   ++ +P  ++ADEP +ALDV++QAQIL+LL  +++++  T + I H+L VV
Sbjct: 670 QRQRVGIARALAVDPDFIVADEPVSALDVSVQAQILNLLEDLQDEFDLTYLFIAHDLSVV 729

Query: 229 AETADRVAVMYAGKIVEIGTVDQIFKNPLHPYTQGLLRAV--PNPLTKIEKLEAIPGTVP 286
               DR+AVMY GKIVE     Q+F  P HPYT+ LL ++  P+PL   +    + G VP
Sbjct: 730 RHICDRIAVMYLGKIVETAQTAQLFSTPKHPYTKSLLSSIPDPDPLATTDDRIILEGDVP 789

Query: 287 NLITPPGGCRFHPRCPKVM 305
           + I PP GCRF  RCP V+
Sbjct: 790 SPIDPPSGCRFRTRCPSVI 808


>pir||A72618 probable oligopeptide transport ATP-binding protein APE1402 -
           Aeropyrum pernix (strain K1) >gi|5105085|dbj|BAA80399.1|
           (AP000061) 347aa long hypothetical oligopeptide
           transport ATP-binding protein [Aeropyrum pernix]
           Length = 347
           
 Score =  229 bits (579), Expect = 3e-59
 Identities = 131/313 (41%), Positives = 195/313 (61%), Gaps = 21/313 (6%)

Query: 18  FYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIESPGRIVEGQVLYYR 77
           F+T A  VKA++ V+  + +G+T  LVGE+G GK+   R I +L E  G    G++ +  
Sbjct: 46  FFTRA-YVKAVDNVTIGIPRGKTLGLVGESGSGKTTFGRVILRLEEPTG----GRIFF-- 98

Query: 78  DDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQIAEAMEVHG-KIKSIK 136
            DG  +D++KL    +++ R      IFQDP+ SL+P  T+   IAE ++VHG K+  ++
Sbjct: 99  -DG--IDVMKLRGRGLKEFR-RRAQIIFQDPYGSLNPRKTIFNLIAEPIKVHGIKVGDLQ 154

Query: 137 EGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGISNNPRILIADEPTTALD 196
           E I   V +L  V + +    +  YPHE SGG +QR+ I   ++  P  ++ DEPT+ALD
Sbjct: 155 EYI---VSLLYQVGLNET--HLYRYPHEFSGGQRQRIAIARVLALKPEFIVLDEPTSALD 209

Query: 197 VTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYAGKIVEIGTVDQIFKNP 256
           V++QAQIL+LL  ++ KY  T + I+H+LGVV   +D +AVMY GKIVE G  +++F+ P
Sbjct: 210 VSVQAQILNLLKDLQRKYSLTYLFISHDLGVVRYMSDYIAVMYLGKIVEFGEAEEVFEKP 269

Query: 257 LHPYTQGLLRAVPNPLTKIEKLEA---IPGTVPNLITPPGGCRFHPRCPKVMSICKEKVP 313
           LHPYT+ LL ++P P  ++ K  +   I G  P+ I PP GCRF  RCP  +  C E+ P
Sbjct: 270 LHPYTKVLLESIPVPDPEVAKRRSRIRIKGEPPSPINPPSGCRFRTRCPIAVDKCLEE-P 328

Query: 314 ELKEIEPGHFVAC 326
            L+E+E GH+VAC
Sbjct: 329 PLEEVERGHWVAC 341


>sp|P24137|OPPF_BACSU OLIGOPEPTIDE TRANSPORT ATP-BINDING PROTEIN OPPF
           >gi|98478|pir||E38447 oligopeptide transport ATP-binding
           protein oppF - Bacillus subtilis
           >gi|143608|gb|AAA62692.1| (M57689) sporulation protein
           [Bacillus subtilis]
           Length = 308
           
 Score =  229 bits (578), Expect = 3e-59
 Identities = 126/326 (38%), Positives = 198/326 (60%), Gaps = 27/326 (8%)

Query: 1   MRKVPEPILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQ 60
           M ++ E +L++++L  HF T  G VKA++ +SFD+YKGET  LVGE+GCGKS T R+I +
Sbjct: 1   MNELTEKLLEIKHLKQHFVTPRGTVKAVDDLSFDIYKGETLGLVGESGCGKSTTGRSIIR 60

Query: 61  LIESPGRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGY 120
           L E+     +G+VL+  ++       K   E  RK++      IFQDP+ASL+P  TV  
Sbjct: 61  LYEA----TDGEVLFNGENVHGRKSRKKLLEFNRKMQ-----MIFQDPYASLNPRMTVAD 111

Query: 121 QIAEAMEVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGIS 180
            IAE +++H   K+ KE +Q+  ++L++V +       N YPHE SGG +QR+ I   ++
Sbjct: 112 IIAEGLDIHKLAKTKKERMQRVHELLETVGLNK--EHANRYPHEFSGGQRQRIGIARALA 169

Query: 181 NNPRILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYA 240
            +P  +IADEP +ALDV+IQAQ+++L+ +++++   T + I H+L +V   +DR+ VMY 
Sbjct: 170 VDPEFIIADEPISALDVSIQAQVVNLMKELQKEKGLTYLFIAHDLSMVKYISDRIGVMYF 229

Query: 241 GKIVEIGTVDQIFKNPLHPYTQGLLRAVPNPLTKIEKLEAIPGTVPNLITPPGGCRFHPR 300
           GK+VE+   D++++NPLHPYT+ LL A+P P    E+         N +           
Sbjct: 230 GKLVELAPADELYENPLHPYTKSLLSAIPLPDPDYER---------NRVR-------QKY 273

Query: 301 CPKVMSICKEKVPELKEIEPGHFVAC 326
            P V  +   +  E +E++PGHFV C
Sbjct: 274 DPSVHQLKDGETMEFREVKPGHFVMC 299


>sp|Q53194|Y4TS_RHISN PROBABLE PEPTIDE ABC TRANSPORTER ATP-BINDING PROTEIN Y4TS
           >gi|1486423|emb|CAA92401.1| (Z68203) OppF homologue
           [Rhizobium sp.] >gi|2182649|gb|AAB91872.1| (AE000098)
           Y4tS [Rhizobium sp. NGR234]
           Length = 353
           
 Score =  229 bits (577), Expect = 4e-59
 Identities = 134/334 (40%), Positives = 201/334 (60%), Gaps = 27/334 (8%)

Query: 6   EPILQVRNLTVHFYTYAG-------IVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAI 58
           + +L+V +LT H+   AG       +V+A+E VSF V  GET  +VGE+GCGKS  +R +
Sbjct: 3   DALLKVESLTKHYPIEAGWFKTNVPVVRAVEDVSFTVQAGETLCVVGESGCGKSTLARLL 62

Query: 59  TQLIE-SPGRI-VEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLY 116
            +LI+ + GR+ VEG            D+  L + E+R  R   +  +FQDP++SL+P  
Sbjct: 63  MRLIDPTSGRVLVEG-----------TDIAGLRKNELRAWR-RRMQMVFQDPYSSLNPRL 110

Query: 117 TVGYQIAEAMEVHGKIKSIKEGIQKAVDILKSV-LIPDPARRVNNYPHELSGGMKQRVVI 175
           T G  I E +E + +  S ++  + A D+L+ V + P+ A R   YP E+SGG +QR+ I
Sbjct: 111 TAGQIITEPVE-NFECLSRRQRQELATDLLRKVGMSPEMASR---YPSEMSGGQRQRLGI 166

Query: 176 GIGISNNPRILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRV 235
              ++  P ++IADE  +ALDV++QAQIL+LL  ++++    +I I+H+L VV     RV
Sbjct: 167 ARALALKPSLIIADEAVSALDVSVQAQILNLLMDLQQETGIALIFISHDLAVVEHIGHRV 226

Query: 236 AVMYAGKIVEIGTVDQIFKNPLHPYTQGLLRAVPNPLTKIEKLEA-IPGTVPNLITPPGG 294
           AVMY G+IVE+   D +F  P+HPYT+ L+ A P P     +LE  + G VP+ + PP G
Sbjct: 227 AVMYLGRIVELSPRDALFAKPVHPYTEALIAAAPVPDPARARLEVPLEGEVPSPVNPPSG 286

Query: 295 CRFHPRCPKVMSICKEKVPELKEIEPGHFVACHL 328
           C FHPRCP  +  C+ +VP L  +  G  VACH+
Sbjct: 287 CAFHPRCPLAVDRCRAEVPPLVPMPDGRAVACHV 320


>pir||G75380 peptide ABC transporter, ATP-binding protein - Deinococcus
           radiodurans (strain R1)
           >gi|6459330|gb|AAF11129.1|AE002000_5 (AE002000) peptide
           ABC transporter, ATP-binding protein [Deinococcus
           radiodurans]
           Length = 346
           
 Score =  229 bits (577), Expect = 4e-59
 Identities = 130/329 (39%), Positives = 198/329 (59%), Gaps = 25/329 (7%)

Query: 8   ILQVRNLTVHFYTYAGI-------VKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQ 60
           +L+V NL  +F    G+       VKA+  ++F V KGE   L+GE+G GK+   RA+ +
Sbjct: 27  LLEVNNLQKYFPIRGGLMSRVVANVKAVNDITFRVGKGEVVGLIGESGSGKTTAGRALLR 86

Query: 61  LIESPGRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGY 120
           LIE  G    GQV++     +  D+ KL + ++R  R  E+  IFQDP ASL+P  TV  
Sbjct: 87  LIEPTG----GQVIF-----NGTDITKLGKSQMRDYR-REMQIIFQDPFASLNPRMTVSD 136

Query: 121 QIAEAMEVHGKIKSIKEGIQKAVDILKSV-LIPDPARRVNNYPHELSGGMKQRVVIGIGI 179
            + EAM++H  +   K  + +  ++L+ V L P+    +  YPHE SGG +QR+ I   +
Sbjct: 137 ILGEAMQIHN-LHPGKARVDRIAELLQRVGLRPE---HMGRYPHEFSGGQRQRIGIARAL 192

Query: 180 SNNPRILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMY 239
           + +P  ++ADEP +ALDV+IQAQ+++L+  ++E+   TV+ I H+L VV    DR+ VMY
Sbjct: 193 AVDPSFIVADEPVSALDVSIQAQVVNLIQDLQEELGLTVLFIAHDLHVVEYICDRMIVMY 252

Query: 240 AGKIVEIGTVDQIFKNPLHPYTQGLLRA--VPNPLTKIEKLEAIPGTVPNLITPPGGCRF 297
            G+I+EI    ++ +NP HPYT+ LL A  VP+P  K +++  + G +P+ I PP GC F
Sbjct: 253 LGRIMEIAPSRELNRNPKHPYTEALLSASPVPDPTIKRQRI-ILEGDIPSPINPPSGCVF 311

Query: 298 HPRCPKVMSICKEKVPELKEIEPGHFVAC 326
             RC   ++ C   VPEL+E+ P HF AC
Sbjct: 312 RTRCRYAIADCANIVPELREVSPDHFKAC 340


>gb|AAG20460.1| (AE005118) oligopeptide ABC transporter ATP-binding; OppD1
           [Halobacterium sp. NRC-1]
           Length = 267
           
 Score =  229 bits (577), Expect = 4e-59
 Identities = 115/250 (46%), Positives = 166/250 (66%), Gaps = 6/250 (2%)

Query: 83  VDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQIAEAMEVHGKIKSIKEGIQKA 142
           +DL  LSE  ++ +RG  I++IFQ+P   L+P+YTVG QI EA+ +H          ++ 
Sbjct: 1   MDLTTLSETALQDVRGKRISHIFQNPQNGLNPVYTVGRQIGEAIRIHDHGDPEVPVQRQV 60

Query: 143 VDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGISNNPRILIADEPTTALDVTIQAQ 202
           VD+L    IP+ + RV++YPHE SGGMKQRV+I + ++ +P +LIADEPTTALDVTIQ Q
Sbjct: 61  VDLLDKTGIPEASARVDDYPHEFSGGMKQRVLIAMALACDPDLLIADEPTTALDVTIQGQ 120

Query: 203 ILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYAGKIVEIGTVDQIFKNPLHPYTQ 262
           IL LL  ++ ++   +I +TH+LGVV+E ADRV VMYAGK++E GTV+ IF+NP HPYT+
Sbjct: 121 ILRLLEDLQAEHDMGIIFVTHDLGVVSEIADRVVVMYAGKVMETGTVEDIFRNPSHPYTR 180

Query: 263 GLLRAVPNPLTKIEKLEAIPGTVPNLITPPGGCRFHPRCPKVMSICKE-KVPELKEIEPG 321
            L+  +P     ++++E   G++P++  PP GCRF PRC      C+    P L  ++ G
Sbjct: 181 ALMDCLPGRGGSMDRIE---GSLPDVTDPPAGCRFSPRCEHATEACRSGDQPPLWGVDDG 237

Query: 322 --HFVACHLY 329
             H  +C  Y
Sbjct: 238 DTHEASCVYY 247


>gi|10955092 moaD [Agrobacterium tumefaciens] >gi|11278927|pir||T45539 moaD
           protein [imported] - Agrobacterium tumefaciens plasmid
           pTi15955 >gi|2665715|gb|AAB88475.1| (AF242881) moaD
           [Agrobacterium tumefaciens]
           Length = 588
           
 Score =  228 bits (576), Expect = 6e-59
 Identities = 123/270 (45%), Positives = 177/270 (65%), Gaps = 10/270 (3%)

Query: 6   EPILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIESP 65
           + +L V+NL V F    G  + ++ +SFD+  G T A+VGE+G GKSVTS AI  L+   
Sbjct: 4   QSVLSVKNLNVAF----GKKQVVQDLSFDIAPGSTLAVVGESGSGKSVTSLAIMGLLPVG 59

Query: 66  GRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQIAEA 125
                G +       +  +LL LSE E+  IRG +I+ IFQ+P  SL+P+  VG+QI EA
Sbjct: 60  VAKASGSIQL-----NGRELLSLSESEMCGIRGGKISMIFQEPMTSLNPVQKVGFQIGEA 114

Query: 126 MEVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGISNNPRI 185
           + +H  ++  KE     +++LK V IPD  RR++NYPH  SGGM+QRV+I + ++ NP +
Sbjct: 115 IRIHRGLRG-KELRNAVLEMLKKVGIPDAERRIDNYPHTFSGGMRQRVMIAMALACNPAL 173

Query: 186 LIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYAGKIVE 245
           +IADEPTTALDVT+QAQIL+LL +++ +    ++ ITH++GVVAE ADRV VM  G++VE
Sbjct: 174 IIADEPTTALDVTVQAQILELLKQLQRETNVALLFITHDMGVVAEIADRVLVMRGGQVVE 233

Query: 246 IGTVDQIFKNPLHPYTQGLLRAVPNPLTKI 275
            G VD +F  P  PYT+ L+ A P+   K+
Sbjct: 234 SGPVDSVFTRPESPYTKVLIEAAPSVAGKL 263


 Score =  182 bits (456), Expect = 7e-45
 Identities = 111/272 (40%), Positives = 161/272 (58%), Gaps = 24/272 (8%)

Query: 7   PILQVRNLTVHFYTYAGI-------VKAIEKVSFDVYKGETFALVGETGCGKSVTSRAIT 59
           PIL+VR+LTV F    G+       V A+EK SF + KGET  LVGE+G GKS   +AI 
Sbjct: 285 PILEVRDLTVRFPLRGGLLGNVQGNVHAVEKASFAIGKGETLGLVGESGSGKSTIGKAII 344

Query: 60  QLIESPGR--IVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYT 117
            L    G   +V+G+ + Y D+ S+  L +            ++  IFQDP  SLD   T
Sbjct: 345 DLAPRFGGSIVVDGRTIDYADEKSLAVLRR------------DVQMIFQDPFGSLDSRQT 392

Query: 118 VGYQIAEAMEVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGI 177
           +G  I E M VHG I S +E  +K   +L+ V + DPAR  ++ PHE SGG +QR+ I  
Sbjct: 393 IGSAIVEPMYVHG-IASGRELREKMEWLLEKVGL-DPAR-ASSLPHEFSGGQRQRICIAR 449

Query: 178 GISNNPRILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAV 237
            +S +P+++IADE  +ALDV I+ QI++L+  ++ ++  + + I+H++  V +   RVAV
Sbjct: 450 ALSMSPKLIIADEAVSALDVAIKGQIIELMMDLQSEFGVSYLFISHDMAAVEKICTRVAV 509

Query: 238 MYAGKIVEIGTVDQIFKNPLHPYTQGLLRAVP 269
           MY G++VEIG  D +   P H YT+ LL AVP
Sbjct: 510 MYFGELVEIGGRDNVIGRPGHSYTKRLLSAVP 541


>pir||C72452 probable peptide transport ATP-binding protein APE2263 - Aeropyrum
           pernix (strain K1) >gi|5105964|dbj|BAA81275.1|
           (AP000064) 347aa long hypothetical peptide transport
           ATP-binding protein [Aeropyrum pernix]
           Length = 347
           
 Score =  228 bits (574), Expect = 1e-58
 Identities = 126/331 (38%), Positives = 193/331 (58%), Gaps = 23/331 (6%)

Query: 8   ILQVRNLTVHFYTYAG-----------IVKAIEKVSFDVYKGETFALVGETGCGKSVTSR 56
           I+ +R L VH+  Y             +V+A++ V   + +GE  A+VGE+GCGK+   +
Sbjct: 13  IVSIRGLKVHYPVYYSLLKRILGRPDAVVRAVDGVDLGIREGEVLAIVGESGCGKTTLGK 72

Query: 57  AITQLIESPGRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLY 116
           AI   IE P        +YYR  G ++   +L+ +  R++R  ++  +FQDP+ SLDPL 
Sbjct: 73  AIVG-IEEPS----DGAIYYR--GELLTPHRLARD--RRLR-RKLQMVFQDPYKSLDPLM 122

Query: 117 TVGYQIAEAMEVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIG 176
            VG Q+AE + +HG  +  +E  ++AV++L++V +          PH+LSGG +QRV I 
Sbjct: 123 PVGDQVAEPLVIHGLARG-EEARRRAVEMLETVGLTPGREFYWRKPHQLSGGQRQRVAIA 181

Query: 177 IGISNNPRILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVA 236
             +   P +++ADEP + +DV+++A ILDL+     +  AT++LITH++ V    ADR+A
Sbjct: 182 RTLVLEPEVIVADEPVSMIDVSMRASILDLIMDYHRRTGATIVLITHDIAVARAVADRIA 241

Query: 237 VMYAGKIVEIGTVDQIFKNPLHPYTQGLLRAVPNPLTKIEKLEAIPGTVPNLITPPGGCR 296
           VMY GKIVE+G    + +NP HPYT  L+ + P+   +      I G VP+ +  P GCR
Sbjct: 242 VMYLGKIVEVGEPRSVIENPRHPYTAALVTSTPSISRRRPPRFPISGEVPSAVAIPPGCR 301

Query: 297 FHPRCPKVMSICKEKVPELKEIEPGHFVACH 327
           FHPRCP   S+C+ + P L E E G   ACH
Sbjct: 302 FHPRCPLASSLCRSREPALVE-EGGRLYACH 331


>gb|AAA62693.1| (M57689) sporulation protein [Bacillus subtilis]
           >gi|2633501|emb|CAB13004.1| (Z99110) oligopeptide ABC
           transporter (ATP-binding protein) [Bacillus subtilis]
           Length = 305
           
 Score =  227 bits (572), Expect = 2e-58
 Identities = 125/321 (38%), Positives = 195/321 (59%), Gaps = 27/321 (8%)

Query: 6   EPILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIESP 65
           E +L++++L  HF T  G VKA++ +SFD+YKGET  LVGE+GCGKS T R+I +L E+ 
Sbjct: 3   EKLLEIKHLKQHFVTPRGTVKAVDDLSFDIYKGETLGLVGESGCGKSTTGRSIIRLYEA- 61

Query: 66  GRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQIAEA 125
               +G+VL+  ++       K   E  RK++      IFQDP+ASL+P  TV   IAE 
Sbjct: 62  ---TDGEVLFNGENVHGRKSRKKLLEFNRKMQ-----MIFQDPYASLNPRMTVADIIAEG 113

Query: 126 MEVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGISNNPRI 185
           +++H   K+ KE +Q+  ++L++V +       N YPHE SGG +QR+ I   ++ +P  
Sbjct: 114 LDIHKLAKTKKERMQRVHELLETVGLNK--EHANRYPHEFSGGQRQRIGIARALAVDPEF 171

Query: 186 LIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYAGKIVE 245
           +IADEP +ALDV+IQAQ+++L+ +++++   T + I H+L +V   +DR+ VMY GK+VE
Sbjct: 172 IIADEPISALDVSIQAQVVNLMKELQKEKGLTYLFIAHDLSMVKYISDRIGVMYFGKLVE 231

Query: 246 IGTVDQIFKNPLHPYTQGLLRAVPNPLTKIEKLEAIPGTVPNLITPPGGCRFHPRCPKVM 305
           +   D++++NPLHPYT+ LL A+P P    E+         N +            P V 
Sbjct: 232 LAPADELYENPLHPYTKSLLSAIPLPDPDYER---------NRVR-------QKYDPSVH 275

Query: 306 SICKEKVPELKEIEPGHFVAC 326
            +   +  E +E++PGHFV C
Sbjct: 276 QLKDGETMEFREVKPGHFVMC 296


>pir||D83419 probable ATP-binding component of ABC transporter PA1807 [imported]
           - Pseudomonas aeruginosa (strain PAO1)
           >gi|9947791|gb|AAG05196.1|AE004607_2 (AE004607) probable
           ATP-binding component of ABC transporter [Pseudomonas
           aeruginosa]
           Length = 536
           
 Score =  226 bits (571), Expect = 2e-58
 Identities = 119/265 (44%), Positives = 177/265 (65%), Gaps = 5/265 (1%)

Query: 6   EPILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIESP 65
           E IL++R+L V F +     + +E VSFD+ +GET ALVGE+G GKSVT+ +I +L+   
Sbjct: 3   ENILEIRDLAVEFLSGEQRQRVVEGVSFDIRQGETLALVGESGSGKSVTAHSILRLLPYS 62

Query: 66  GRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQIAEA 125
                   ++Y+ +    DLLKL E  +R IRGN IA +FQ+P  SL+PL+T+  Q+AE 
Sbjct: 63  VASHPAGSIHYQGE----DLLKLPERRLRGIRGNRIAMVFQEPMTSLNPLHTIEKQLAEV 118

Query: 126 MEVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGISNNPRI 185
           + +H  +   K    + +++L+ V IP+PA+R+  YPHELSGG +QRV+I + ++  P++
Sbjct: 119 LALHKGLGGAKASA-RILELLELVGIPEPAKRLKAYPHELSGGQRQRVMIAMALACEPQL 177

Query: 186 LIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYAGKIVE 245
           LIADEPTTALDVT+Q +ILDLL  ++ +   +++LITH+L +V   A RV VM  G+IVE
Sbjct: 178 LIADEPTTALDVTVQLKILDLLKDLQARLGMSLLLITHDLNLVRRIAHRVCVMQQGRIVE 237

Query: 246 IGTVDQIFKNPLHPYTQGLLRAVPN 270
             +  ++F  P HPYT+ LL A P+
Sbjct: 238 QASCQELFAAPRHPYTRELLNAEPS 262


 Score =  173 bits (435), Expect = 2e-42
 Identities = 103/269 (38%), Positives = 160/269 (59%), Gaps = 21/269 (7%)

Query: 6   EPILQVRNLTVHFYTYAGI-------VKAIEKVSFDVYKGETFALVGETGCGKSVTSRAI 58
           E +L V +L V F    G+       VKA++ V+F++ +G+T  +VGE+G GKS    AI
Sbjct: 272 ETLLAVDDLRVWFPIRKGVFRRTVDHVKAVDGVNFELPRGQTLGIVGESGSGKSTLGLAI 331

Query: 59  TQLIESPGRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTV 118
            +L+ES G I        R +G+ +D   L++ ++R +R  E+  +FQDP+ SL P   V
Sbjct: 332 LRLLESQGGI--------RFEGTRLD--GLAQHDVRPLR-REMQVVFQDPYGSLSPRMCV 380

Query: 119 GYQIAEAMEVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIG 178
           G  + E + +H +I S  E  Q  +D L  V + DP  R   YPHE SGG +QR+ I   
Sbjct: 381 GEIVGEGLRIH-RIGSEAEQEQAIIDALVEVGL-DPQTRYR-YPHEFSGGQRQRIAIARA 437

Query: 179 ISNNPRILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVM 238
           +   P +++ DEPT+ALD T+Q Q+++LL +++ KY  T + I+H+L VV   + ++ V+
Sbjct: 438 LVLKPALILLDEPTSALDRTVQRQVVELLRQLQGKYNLTYLFISHDLAVVKALSHQLMVV 497

Query: 239 YAGKIVEIGTVDQIFKNPLHPYTQGLLRA 267
             GK+VE G+ + +F +P HPYTQ LL A
Sbjct: 498 RHGKVVEQGSAEAVFASPQHPYTQQLLEA 526


>gi|11499360 dipeptide ABC transporter, ATP-binding protein (dppF)
           [Archaeoglobus fulgidus] >gi|7442541|pir||B69471
           dipeptide transport ATP-binding protein dppF -
           Archaeoglobus fulgidus >gi|2648778|gb|AAB89479.1|
           (AE000980) dipeptide ABC transporter, ATP-binding
           protein (dppF) [Archaeoglobus fulgidus]
           Length = 323
           
 Score =  225 bits (568), Expect = 5e-58
 Identities = 130/331 (39%), Positives = 196/331 (58%), Gaps = 26/331 (7%)

Query: 8   ILQVRNLTVHFYTYAGI-----------VKAIEKVSFDVYKGETFALVGETGCGKSVTSR 56
           +L+V NL  +F     +           V+A++ VSF++ +GE  +LVGE+GCGK+ T R
Sbjct: 1   MLRVENLKKYFPVQKSVLEVLLSGRRDFVRAVDGVSFEMKQGEVLSLVGESGCGKTTTGR 60

Query: 57  AITQLIESPGRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLY 116
            I  L     R   G++ Y++D     ++  LSEEE R+++   I  +FQDP+ASL+P  
Sbjct: 61  IIVGL----ERPTSGKI-YFKDR----EITSLSEEEQRRMK-RHIQMVFQDPYASLNPRM 110

Query: 117 TVGYQIAEAMEVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIG 176
            +G  + E++ +HG I    E  + A+ +L  V +P   +  N  P++LSGG +QRV I 
Sbjct: 111 KIGEHLVESLTIHG-IAENDEAREMAMSMLDRVGLPGE-QFFNRMPYQLSGGQRQRVAIA 168

Query: 177 IGISNNPRILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVA 236
             +   P  ++ADEP + +DV+++A ILDLL   +++Y  +++ ITH+L V     DR+A
Sbjct: 169 RAMILKPDFVVADEPVSMIDVSLRAAILDLLMSFRDEYNLSMLFITHDLSVARIVGDRIA 228

Query: 237 VMYAGKIVEIGTVDQIFKNPLHPYTQGLLRAVPNPLTKIEKLEAIPGTVPNLITPPGGCR 296
           VMY GKI+EIG   ++  NP HPYT  LL +VP+ + K  K+E I G + N I  P GCR
Sbjct: 229 VMYLGKIMEIGKTREVIHNPRHPYTAALLSSVPSFVKKGRKVEII-GDIANPIDIPSGCR 287

Query: 297 FHPRCPKVMSICKEKVPELKEIEPGHFVACH 327
           +HPRCP     CK++ PEL+  E  H  ACH
Sbjct: 288 YHPRCPFAREKCKKEEPELEGGE--HSFACH 316


>pir||F83082 probable ATP-binding component of ABC dipeptide transporter PA4506
           [imported] - Pseudomonas aeruginosa (strain PAO1)
           >gi|9950746|gb|AAG07894.1|AE004864_6 (AE004864) probable
           ATP-binding component of ABC dipeptide transporter
           [Pseudomonas aeruginosa]
           Length = 323
           
 Score =  224 bits (565), Expect = 1e-57
 Identities = 130/334 (38%), Positives = 206/334 (60%), Gaps = 31/334 (9%)

Query: 6   EPILQVRNLTVHFYTYAGI------VKAIEKVSFDVYKGETFALVGETGCGKSVTSRAIT 59
           E +L  R+LT H+    G+      V+A+  VSF++  G+T A+VGE+GCGKS  +RA+T
Sbjct: 2   ETVLTARDLTRHYEVSRGLFKGHAQVRALNGVSFELEAGKTLAVVGESGCGKSTLARALT 61

Query: 60  QLIESP--GRI-VEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLY 116
            LIE P  G + + GQ           ++   S+++ R++R  ++  +FQ+P+ASL+P  
Sbjct: 62  -LIEEPTSGSLKIAGQ-----------EVKGASKDQRRQLR-RDVQMVFQNPYASLNPRQ 108

Query: 117 TVGYQIAEAMEVHGKIKSIKEGIQKAVDILKSV-LIPDPARRVNNYPHELSGGMKQRVVI 175
            +G Q+AE + ++  + S +E  +K   +++ V L P+  +R   YPH  SGG +QR+ +
Sbjct: 109 KIGDQLAEPLLINTAL-SREERREKVQQMMRQVGLRPEHYQR---YPHMFSGGQRQRIAL 164

Query: 176 GIGISNNPRILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRV 235
              +   P++L+ADEPT+ALDV+IQAQ+L+L   ++++++   + I+HNL VV   AD V
Sbjct: 165 ARAMMLQPKVLVADEPTSALDVSIQAQVLNLFMDLQQQFRTAYVFISHNLAVVRHVADDV 224

Query: 236 AVMYAGKIVEIGTVDQIFKNPLHPYTQGLLRAVP--NPLTKIEKLEAIPGTVPNLITPPG 293
            VMY G+  E+G  D++++NPLHPYT+ LL A P  +P     K+  I G +PN + PP 
Sbjct: 225 LVMYLGRPAEMGPADKLYENPLHPYTRALLSATPAIHPDPTKPKIR-IQGELPNPLNPPE 283

Query: 294 GCRFHPRCPKVMSICKEKVPELKEIEPGHFVACH 327
           GC FH RCP     C+ +VPEL+ ++    VACH
Sbjct: 284 GCAFHKRCPYATERCRSEVPELRLLDQRQ-VACH 316


>emb|CAC05751.1| (AL391751) putative peptide transport system ATP-binding protein
           [Streptomyces coelicolor]
           Length = 356
           
 Score =  224 bits (565), Expect = 1e-57
 Identities = 125/327 (38%), Positives = 193/327 (58%), Gaps = 25/327 (7%)

Query: 1   MRKVPEPILQVRNLTVHFYTYAGI--------VKAIEKVSFDVYKGETFALVGETGCGKS 52
           M +  EPIL+VR L  H+   +GI        VKA++ V F + +GET  +VGE+GCGKS
Sbjct: 1   MAETTEPILEVRGLVKHYPLTSGILFKKQVGAVKAVDGVDFRLARGETLGIVGESGCGKS 60

Query: 53  VTSRAITQLIESPGRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASL 112
             ++ +  L     R   G++ Y  +D     + +LS   ++ +R N I  +FQDP+ SL
Sbjct: 61  TVAKMLVNL----ERPTAGEIRYKGED-----ITRLSGRALKSVRRN-IQMVFQDPYTSL 110

Query: 113 DPLYTVGYQIAEAMEVHGKIKSIKEGIQKAVDILKSV-LIPDPARRVNNYPHELSGGMKQ 171
           +P  TVG  I EA ++H ++    +  ++  D+L  V L P+    +N YPH+ SGG +Q
Sbjct: 111 NPRMTVGDIIGEAYDIHPEVAPKGDRRRRVQDLLDVVGLNPE---YINRYPHQFSGGQRQ 167

Query: 172 RVVIGIGISNNPRILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAET 231
           R+ I  G++  P I++ADEP +ALDV++QAQ+++L+ ++++++  + I I H+L +V   
Sbjct: 168 RIGIARGLALRPEIIVADEPVSALDVSVQAQVINLMARLQDEFDLSYIFIAHDLSIVRHI 227

Query: 232 ADRVAVMYAGKIVEIGTVDQIFKNPLHPYTQGLLRAVPNPLTKIEKLE---AIPGTVPNL 288
           +DRV VMY G+IVE G  ++I+ +P HPYTQ LL AVP P  +  +      + G VP+ 
Sbjct: 228 SDRVGVMYLGRIVETGRDEEIYDHPTHPYTQALLSAVPVPDPEAREHRERIILSGDVPSP 287

Query: 289 ITPPGGCRFHPRCPKVMSICKEKVPEL 315
              P GCRF  RC K    C  +VP L
Sbjct: 288 TNIPSGCRFRTRCWKARERCALEVPAL 314


>emb|CAC11415.1| (AL445063) sporulation protein (spo0KD) related protein
           [Thermoplasma acidophilum]
           Length = 704
           
 Score =  224 bits (564), Expect = 1e-57
 Identities = 128/333 (38%), Positives = 197/333 (58%), Gaps = 28/333 (8%)

Query: 11  VRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIESPGRIVE 70
           +RN++V F TY+GIV A+  VSFD+ +G    +VGE+G GKS  + +I  L+  P   + 
Sbjct: 1   MRNVSVEFKTYSGIVHALSDVSFDLKQGRFLGIVGESGSGKSTLALSIMSLL--PENAMM 58

Query: 71  GQVLYYRDDGSVVDLL----------KLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGY 120
              +Y +    + D++          K+ E+ +R IR   I+ +FQ    S +P+YT+  
Sbjct: 59  RGSIYLKGTEYISDVIINNAKKKKARKILEDNLRNIRWKNISMVFQGAMNSFNPVYTIRR 118

Query: 121 QIAEAMEVHGKI------KSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVV 174
           Q+ E  ++H  +      K ++E ++ A  +  SVL        + YPHELSGGMKQR V
Sbjct: 119 QMFEVFKIHTTLDNDEIEKKVEEALRMA-GLNISVL--------DMYPHELSGGMKQRAV 169

Query: 175 IGIGISNNPRILIADEPTTALDVTIQAQILDLLNKMKEKYKA-TVILITHNLGVVAETAD 233
           I + +S +P I+IADEPTT LDV  QA+I+  L K+KE  K  ++ILI+H+LGVV++ AD
Sbjct: 170 IAMALSLDPDIVIADEPTTGLDVITQAEIISQLKKLKENGKIKSLILISHDLGVVSQLAD 229

Query: 234 RVAVMYAGKIVEIGTVDQIFKNPLHPYTQGLLRAVPNPLTKIEKLEAIPGTVPNLITPPG 293
            V V+YAGK+ E G   +IF+N  +PYT  L+ + P+       +E IPG++P+ +    
Sbjct: 230 EVMVLYAGKVFEYGEKSRIFQNTANPYTYKLIGSYPSIRNAKRYVEGIPGSLPDPMKIGK 289

Query: 294 GCRFHPRCPKVMSICKEKVPELKEIEPGHFVAC 326
           GC+F  RC     +C+E+ PEL ++E  H+ AC
Sbjct: 290 GCKFADRCYMARDVCREEEPELIKVEDNHYSAC 322


 Score =  184 bits (462), Expect = 1e-45
 Identities = 112/316 (35%), Positives = 173/316 (54%), Gaps = 19/316 (6%)

Query: 25  VKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIESPGRIVEGQVLYYRDDGSVVD 84
           V+A++ ++F + KGE   +VGE+G GK+   + +  L  SP     G++ Y   +G V  
Sbjct: 377 VRAVDDITFAIRKGEILGIVGESGSGKTTLGKTLLGLY-SP---TAGKITYSFSNGDVEI 432

Query: 85  LLKLSEEEI-RKIRGNEIAYIFQDPHASLDPLYTVGYQIAEAMEVHGKIKSIKEGIQ--- 140
               SE E+ R     E   IFQDP+ SL+P  TV   +AE +      K  KE      
Sbjct: 433 TPTTSESELMRSSIRKETQMIFQDPYDSLNPKLTVYDIVAEPIIARRYHKGNKEKDDIYK 492

Query: 141 ---KAVDILKSVLIPDPARRVNNY----PHELSGGMKQRVVIGIGISNNPRILIADEPTT 193
              + ++++K  L     + V NY    PHELSGG +QRV     +  N   +IADEPT+
Sbjct: 493 NPLEILNLVKIALAKASLKPVENYLFRYPHELSGGERQRVATARALVLNSEFIIADEPTS 552

Query: 194 ALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYAGKIVEIGTVDQIF 253
            LDV+I+A  ++++ +++ K   T++ I+H++      +D++ VMY GK VE+G+ D I 
Sbjct: 553 MLDVSIRASFMNMMKEIRSKEGITMVYISHDIASTYYMSDKILVMYLGKAVEMGSADAII 612

Query: 254 KNPLHPYTQGLLRAVPNPLTKIE--KLEAIPGTVPNLITPPGGCRFHPRCPKVMSICKEK 311
             PLHPYT+ L++A+P P +  +  K++ I G + N I  P GCRF+ RC     ICK+ 
Sbjct: 613 NEPLHPYTKALIKAIPTPFSDWDPSKIDII-GEIGNAINVPKGCRFYNRCIYRQDICKDN 671

Query: 312 VPELKEIEPGHFVACH 327
            P +K  E  H+  CH
Sbjct: 672 PPTVKGAE-DHWYLCH 686


>sp|P47325|OPPD_MYCGE OLIGOPEPTIDE TRANSPORT ATP-BINDING PROTEIN OPPD
           >gi|1361734|pir||G64208 oligopeptide transport
           ATP-binding protein amiE - Mycoplasma genitalium
           >gi|1045756|gb|AAC71297.1| (U39688) oligopeptide ABC
           transporter, ATP-binding protein (oppD) [Mycoplasma
           genitalium]
           Length = 402
           
 Score =  223 bits (562), Expect = 3e-57
 Identities = 129/358 (36%), Positives = 200/358 (55%), Gaps = 43/358 (12%)

Query: 8   ILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIESPGR 67
           IL + +L V+F    GI+ A+  +   V +G    +VGE+G GKSV+ ++I    ++   
Sbjct: 21  ILDITDLHVNFKVKDGILHAVRGIDLKVERGSIVGIVGESGSGKSVSVKSIIGFNDNAQ- 79

Query: 68  IVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQIAEAME 127
             + +++ +++    VD+ KL + + +  RG  ++YI QDP  SL+P  T+G Q+ EA+ 
Sbjct: 80  -TKAKLMNFKN----VDITKLKKHQWKYYRGTYVSYISQDPLFSLNPTMTIGKQVKEAIY 134

Query: 128 V---------------------------HGKIKSIKEGIQ----------KAVDILKSVL 150
           V                             K+K IK+  Q          K ++IL+ + 
Sbjct: 135 VASKRRYFQAKSDLKFALSNKEIDKKTYKSKLKEIKQTYQQKIKPINVEKKTLEILQFIG 194

Query: 151 IPDPARRVNNYPHELSGGMKQRVVIGIGISNNPRILIADEPTTALDVTIQAQILDLLNKM 210
           I D  +R+  +P E SGGM+QR+VI I ++  P ++IADEPTTALDVTIQA++L L+ ++
Sbjct: 195 INDAKKRLKAFPSEFSGGMRQRIVIAIAVATEPDLIIADEPTTALDVTIQAKVLTLIKQL 254

Query: 211 KEKYKATVILITHNLGVVAETADRVAVMYAGKIVEIGTVDQIFKNPLHPYTQGLLRAVPN 270
           ++    T+I I+HN+ ++A   D V VMYAGKIVE G V++IF NPLHPYT  L+ ++P 
Sbjct: 255 RDLLNITIIFISHNISLIANFCDFVYVMYAGKIVEQGLVEEIFTNPLHPYTWALISSIPE 314

Query: 271 PLTKIEKLEAIPGTVPNLITPPGGCRFHPRCPKVMSICKEKVPELKEIEPGHFVACHL 328
              K + L +IPG +PN++TPP G  F  R    ++I  E  P   E+   H  A  L
Sbjct: 315 QKDKNKPLTSIPGVIPNMLTPPKGDAFASRNQYALAIDFEYHPPFFEVTKTHKAATWL 372


>gb|AAG09260.1| (AF176664) EppD [EDTA-degrading bacterium BNC1]
           Length = 610
           
 Score =  222 bits (561), Expect = 3e-57
 Identities = 121/264 (45%), Positives = 177/264 (66%), Gaps = 8/264 (3%)

Query: 7   PILQVRNLTVHFYTYAGI-VKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIESP 65
           P++ V  LTV F  +    ++A+  VS+ +  GE  ALVGE+G GKSV++ A+  L+   
Sbjct: 18  PLVSVSGLTVSFDRHREEPIEAVRDVSWSIGSGEVLALVGESGSGKSVSALAVMGLLPRN 77

Query: 66  GRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQIAEA 125
            R+  G + +  ++     LL  SE+  R +RG+ I  + QDP  SL+P+YT+G QI E 
Sbjct: 78  ARVA-GSIRWRGEE-----LLGASEKRRRALRGSRIGLVPQDPMTSLNPVYTIGAQIREG 131

Query: 126 MEVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGISNNPRI 185
           +  H K+ S +E  ++ +++L+++ IP    R+N+YPHELSGGM+QRVVI + ++NNP +
Sbjct: 132 IRAHQKL-SEREMAERTLELLETMGIPHARERMNSYPHELSGGMRQRVVIAMAMANNPDL 190

Query: 186 LIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYAGKIVE 245
           +IADE TTALDVT+QAQ+LD L K +    A ++LITH+LGVVA  ADRVAVM  G++VE
Sbjct: 191 IIADEATTALDVTVQAQVLDALKKAQALTGAALLLITHDLGVVAGRADRVAVMQRGEVVE 250

Query: 246 IGTVDQIFKNPLHPYTQGLLRAVP 269
            GTVD+IF  P   YT+ LL ++P
Sbjct: 251 QGTVDEIFYQPASSYTRKLLHSIP 274


 Score =  181 bits (455), Expect = 9e-45
 Identities = 107/280 (38%), Positives = 169/280 (60%), Gaps = 24/280 (8%)

Query: 7   PILQVRNLTVHFYTYA--------GIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAI 58
           PIL +RN+  HF  Y+        G++KA+  V  DV  G T  +VGE+G GK+   R++
Sbjct: 309 PILSMRNVGKHFPVYSRGVIRGRVGVIKAVAGVDLDVEAGTTLGIVGESGSGKTTLIRSL 368

Query: 59  TQLIESPGRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTV 118
             L      I  G +L+   DG   D+ ++   + R++R   +  +FQDP+ASLDP+ TV
Sbjct: 369 FNLEP----ITHGTILF---DGQ--DVHRMPPRDRRRMR-KCVQMVFQDPYASLDPMMTV 418

Query: 119 GYQIAEAMEVHGKIKSIKEGIQKAVDILKSV-LIPDPARRVNNYPHELSGGMKQRVVIGI 177
              + E   ++   + + E  ++ +++L+ V L P+ A R   YP+E SGG +QR+ I  
Sbjct: 419 RDILMEPAVINRMDRKLAE--RRVMELLERVHLKPEHAAR---YPNEFSGGQRQRIAIAR 473

Query: 178 GISNNPRILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAV 237
            +   PR+L+ DEP ++LDV+IQA++L LL ++++    + + ++H+L VVAE A  V V
Sbjct: 474 ALMLYPRLLVLDEPVSSLDVSIQAEVLTLLKELQKDLNLSYLFVSHDLSVVAEIAHSVIV 533

Query: 238 MYAGKIVEIGTVDQIFKNPLHPYTQGLLRAVPNPLTKIEK 277
           MY G+IVE G VD++F+NP HPYT+ LL AVP P  + E+
Sbjct: 534 MYRGRIVERGRVDELFRNPKHPYTRALLSAVPIPDPRTER 573


>pir||C75142 oligopeptide transport ATP-binding protein appf PAB0630 -
           Pyrococcus abyssi (strain Orsay)
           >gi|5458363|emb|CAB49852.1| (AJ248285) OLIGOPEPTIDE
           TRANSPORT ATP-BINDING PROTEIN APPF [Pyrococcus abyssi]
           Length = 322
           
 Score =  222 bits (560), Expect = 4e-57
 Identities = 126/326 (38%), Positives = 200/326 (60%), Gaps = 16/326 (4%)

Query: 8   ILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIESPGR 67
           +L VRNL V++ T  G V+A++ VSF+V +GE F + GE+GCGKS    ++  ++  P  
Sbjct: 3   LLDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSL--ILRKPPM 60

Query: 68  IVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQIAEAME 127
             +G    ++      DL+ L  +E+RKI+ +E++ I Q    +L+P   +   + +   
Sbjct: 61  EYKGGSAIFKGR----DLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDLAR 116

Query: 128 VHGKI--KSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGISNNPRI 185
            HG    + ++E +++ + ++K  L P   R  + YP ELSGGM+QR  + +    NP +
Sbjct: 117 EHGYADRREVEELLRERLSMVK--LSP---RVADMYPVELSGGMRQRATMVVSTLLNPDL 171

Query: 186 LIADEPTTALDVTIQAQILDLLNK-MKEKYKATVILITHNLGVVAETADRVAVMYAGKIV 244
           LIADE T+ALDVT Q  +++LL+  M+E    ++I +TH+L ++ + ADRV VMYAGK+V
Sbjct: 172 LIADEITSALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVV 231

Query: 245 EIGTVDQIFKNPLHPYTQGLLRAVPNPLT--KIEKLEAIPGTVPNLITPPGGCRFHPRCP 302
           EIG ++++ +NP HPYTQ LL ++P      K E+L  IPG   +L+ PP GCRF+ RCP
Sbjct: 232 EIGPMEEVLENPAHPYTQLLLNSLPRMGVHYKRERLSGIPGYPISLLNPPKGCRFYTRCP 291

Query: 303 KVMSICKEKVPELKEIEPGHFVACHL 328
             M  C++  P+L ++   H+ ACHL
Sbjct: 292 FAMEDCRDVEPKLVKVGRDHYAACHL 317


>pir||F75068 dipeptide abc transporter, ATP-binding protein (dppd) PAB1346 -
           Pyrococcus abyssi (strain Orsay)
           >gi|5458956|emb|CAB50443.1| (AJ248287) dipeptide ABC
           transporter, ATP-binding protein (dppD) [Pyrococcus
           abyssi]
           Length = 322
           
 Score =  222 bits (560), Expect = 4e-57
 Identities = 127/326 (38%), Positives = 199/326 (60%), Gaps = 16/326 (4%)

Query: 8   ILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIESPGR 67
           +L VRNL V++ T  G V+A++ VSF+V +GE F + GE+GCGKS    ++  ++  P  
Sbjct: 3   LLDVRNLRVYYRTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSL--ILRKPPM 60

Query: 68  IVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQIAEAME 127
             +G    ++      DL+ L  +E+RKI+ +E++ I Q    +L+P   +   + +   
Sbjct: 61  EYKGGSAIFKGR----DLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDLAR 116

Query: 128 VHGKI--KSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGISNNPRI 185
            HG    + ++E +++ + ++K  L P   R  + YP ELSGGM+QR  + +    NP +
Sbjct: 117 EHGYADRREVEELLRERLSMVK--LSP---RVADMYPVELSGGMRQRATMVVSTLLNPDL 171

Query: 186 LIADEPTTALDVTIQAQILDLLNK-MKEKYKATVILITHNLGVVAETADRVAVMYAGKIV 244
           LIADE T+ALDVT Q  +++LL+  M+E    ++I +TH+L ++ + ADRV VMYAGK+V
Sbjct: 172 LIADEITSALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVV 231

Query: 245 EIGTVDQIFKNPLHPYTQGLLRAVPNPLT--KIEKLEAIPGTVPNLITPPGGCRFHPRCP 302
           EIG ++++ +NP HPYTQ LL ++P      K E+L  IPG   +L+ PP GCRF+ RCP
Sbjct: 232 EIGPMEEVLENPAHPYTQLLLNSLPRMGVHYKRERLSGIPGYPISLLNPPRGCRFYTRCP 291

Query: 303 KVMSICKEKVPELKEIEPGHFVACHL 328
             M  C E  P+L ++   H+ ACHL
Sbjct: 292 FAMEHCPEVEPKLVKVGKEHYAACHL 317


>gb|AAC64256.1| (AF042861) putative OppF [Treponema denticola]
           Length = 385
           
 Score =  220 bits (554), Expect = 2e-56
 Identities = 119/330 (36%), Positives = 194/330 (58%), Gaps = 26/330 (7%)

Query: 10  QVRNLTVHFYTYAGI------VKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIE 63
           ++ +L + + TY+ +      V A + +   +++GET  LVGE+GCGKS   R I +L +
Sbjct: 64  ELTDLILDYETYSDLHGQNLCVIANDGIDLVIHEGETVGLVGESGCGKSTLGRTILKLYK 123

Query: 64  SPGRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQIA 123
                  G++ +  +  ++ +        +RK    ++  IFQDP++SL+P  TVG  I 
Sbjct: 124 PTA----GEIFF--EGENITNYTVTQMMPLRK----KMQIIFQDPYSSLNPKMTVGQIIG 173

Query: 124 EAMEVHGKIKSIKEGIQKAV-DILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGISNN 182
           EA+  HG  K      +K V +I+ +  + D    +  YPHE SGG +QR+ I   ++  
Sbjct: 174 EALLEHGMFKKKDPAYEKYVKEIMNTCGLAD--YMIYRYPHEFSGGQRQRIGIARALALK 231

Query: 183 PRILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYAGK 242
           P+ ++ DE  +ALDV+IQ+QI++LLN +++++  + + I+H+L VV   +DR+ VMY G 
Sbjct: 232 PKFIVCDEAVSALDVSIQSQIINLLNDLQKEFNLSYLFISHDLSVVKHISDRIGVMYLGN 291

Query: 243 IVEIGTVDQIFKNPLHPYTQGLLRAVPNPLTKIEKLEA-----IPGTVPNLITPPGGCRF 297
           +VE     +++ NPLHPYT+ LL A+P   T ++K+       + G +P+ I  P GC+F
Sbjct: 292 MVEFTDKREMYANPLHPYTKVLLSAIPE--TDLQKMRTKRRILLEGDIPSNIITPTGCKF 349

Query: 298 HPRCPKVMSICKEKVPELKEIEPGHFVACH 327
           H RCP    ICK ++P+ KE +PGHFVACH
Sbjct: 350 HTRCPIAKDICKREIPQFKEEKPGHFVACH 379


>gi|10955083 agaD [Agrobacterium tumefaciens] >gi|11346288|pir||T45532 agaD
           protein [imported] - Agrobacterium tumefaciens plasmid
           pTi15955 >gi|2665708|gb|AAB88468.1| (AF242881) agaD
           [Agrobacterium tumefaciens]
           Length = 569
           
 Score =  219 bits (553), Expect = 3e-56
 Identities = 116/274 (42%), Positives = 173/274 (62%), Gaps = 6/274 (2%)

Query: 8   ILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIESPGR 67
           +L++ NLTV F T  G+  A+  VS  ++ GE   LVGE+G GK++ S A   L+     
Sbjct: 6   VLKIDNLTVAFKTGDGLRTAVNSVSLSLHSGEILGLVGESGSGKTILSLAAMGLLPPNAV 65

Query: 68  IVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQIAEAME 127
           +  G V ++ +D     LL    + +RK+RG  IA IFQDP ASLDP++T G QI E++ 
Sbjct: 66  VAGGTVKFFGED-----LLTARPDVLRKLRGKRIAMIFQDPMASLDPVFTCGSQIVESIL 120

Query: 128 VHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGISNNPRILI 187
           +H ++   +   Q+A+D+L  V I DP R + +YPHELSGG  QRV+I + ++  P ++I
Sbjct: 121 LHERVPR-RNAHQRALDLLTKVGIVDPERCMGSYPHELSGGQCQRVMIAMAVACKPDVII 179

Query: 188 ADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYAGKIVEIG 247
           ADEPTTALDVT+Q Q+L+LL  + ++  A ++LITH+LGV+ E ADRVAV+Y G ++E  
Sbjct: 180 ADEPTTALDVTVQKQVLNLLQNLNQEIGAAILLITHDLGVIYEVADRVAVIYRGDMMEEA 239

Query: 248 TVDQIFKNPLHPYTQGLLRAVPNPLTKIEKLEAI 281
               +F  P   YT+ L+ ++P+  T   +L  I
Sbjct: 240 KTTDLFAAPKSAYTKALIASMPSVSTPKTRLPVI 273


 Score =  182 bits (456), Expect = 7e-45
 Identities = 105/270 (38%), Positives = 161/270 (58%), Gaps = 21/270 (7%)

Query: 6   EPILQVRNLTVHFYTYAGIV------KAIEKVSFDVYKGETFALVGETGCGKSVTSRAIT 59
           + +L +RNLT  F+     +      +A++ VS D+    T  LVGE+GCGKS  SR + 
Sbjct: 302 QTLLTIRNLTKTFWLRESPLAPPKEFRAVDDVSLDIPARSTVGLVGESGCGKSTLSRLVM 361

Query: 60  QLIESPGRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVG 119
           +L+E     +E        DG  +DL  L  E +R  R N  A +FQ+P+ SL+P  TV 
Sbjct: 362 RLMEPNSGTIEF-------DG--IDLTSLDRERLRHARQN-FALVFQNPYGSLNPRQTVT 411

Query: 120 YQIAEAMEVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGI 179
             IA  +++H K +  +  + K +D   +V +P  A R   YPHE SGG +QR+VI   +
Sbjct: 412 DLIAAPVDIHAKGRDREAIVAKLLD---AVGLPRDAMR--RYPHEFSGGQRQRIVIARAL 466

Query: 180 SNNPRILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMY 239
           +  P++LI DE  +ALDV++QAQ+L+LL  +++++  T + ITH++ VV   +D +AVM 
Sbjct: 467 ALRPKLLICDEAVSALDVSVQAQVLNLLQDLQDEFDLTYLFITHDMSVVRHISDTIAVMQ 526

Query: 240 AGKIVEIGTVDQIFKNPLHPYTQGLLRAVP 269
            G+IVE GT +++F +P   YT+ LLRAVP
Sbjct: 527 KGRIVETGTAEEVFDHPKDEYTRTLLRAVP 556


>gb|AAG20461.1| (AE005118) oligopeptide ABC transporter ATP-binding; AppF
           [Halobacterium sp. NRC-1]
           Length = 440
           
 Score =  219 bits (551), Expect = 5e-56
 Identities = 125/328 (38%), Positives = 193/328 (58%), Gaps = 31/328 (9%)

Query: 6   EPILQVRNLTVHF-------YTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAI 58
           E +++V  L  H+        T  G V+A++ VSF+V  GET  +VGE+GCGKS  + ++
Sbjct: 14  ESLMRVDGLKKHYPITEGVLRTEVGRVRAVDGVSFEVRAGETLGIVGESGCGKSTVAESV 73

Query: 59  TQLIESPGRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTV 118
            +L +       G V +  +D +  D     +  +++ R  E   IFQ+P +S DP  T 
Sbjct: 74  LRLTDPTA----GSVYFDGEDVTAYD-----DTALKRFR-REAQMIFQNPDSSFDPRMTT 123

Query: 119 GYQIAEAMEVHGKIKSIKEGIQKAVDILKSVLIP--DPARRVNNYPHELSGGMKQRVVIG 176
           G  +AE +++HG +      ++ A D+L+ V +   D AR    YPHELSGG KQRV + 
Sbjct: 124 GESVAEPLKIHG-VGPRSRRLEIARDLLERVGMSGEDAAR----YPHELSGGQKQRVALA 178

Query: 177 IGISNNPRILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVA 236
             +  NPR+++ADEP +ALDV++QA++L LLN ++ ++   V+ I+H++GVV E  DRVA
Sbjct: 179 RALVVNPRLIVADEPVSALDVSVQAEVLTLLNDIQAEFNLGVLFISHDMGVVREVCDRVA 238

Query: 237 VMYAGKIVEIGTVDQIFKNPLHPYTQGLLRAVPNPLTKIEKLEA-IPGTVPNLITPPGGC 295
           VMY G+IVE+G  + +F +P HPYT+ LLR++P    +    +A + G VP    PP GC
Sbjct: 239 VMYLGEIVEMGRTEDVFNDPEHPYTRALLRSIPTVGVESRGTDAGLRGEVPPPSDPPTGC 298

Query: 296 RFHPRCPKVMSICKEKVPELKEIEPGHF 323
            FH RCP+V+       P+  + E  H+
Sbjct: 299 NFHTRCPEVIQ------PDGYDFEQAHW 320


>sp|P37313|DPPF_ECOLI DIPEPTIDE TRANSPORT ATP-BINDING PROTEIN DPPF
           >gi|1073370|pir||S47762 dipeptide transport protein dppF
           - Escherichia coli >gi|466679|gb|AAB18518.1| (U00039)
           was dppE [Escherichia coli] >gi|1789962|gb|AAC76565.1|
           (AE000431) putative ATP-binding component of dipeptide
           transport system [Escherichia coli K12]
           Length = 334
           
 Score =  218 bits (550), Expect = 6e-56
 Identities = 127/329 (38%), Positives = 200/329 (60%), Gaps = 23/329 (6%)

Query: 6   EPILQVRNLTVHFYTYAG------IVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAIT 59
           +P+LQ  +L  H+    G      +VKA++ VSF++ +G+T A+VGE+GCGKS   R +T
Sbjct: 10  QPLLQAIDLKKHYPVKKGMFAPERLVKALDGVSFNLERGKTLAVVGESGCGKSTLGRLLT 69

Query: 60  QLIESPGRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVG 119
            +IE P     G  LYY+      DLLK  + + +K+R  +I  +FQ+P+ SL+P   VG
Sbjct: 70  -MIEMP----TGGELYYQGQ----DLLK-HDPQAQKLRRQKIQIVFQNPYGSLNPRKKVG 119

Query: 120 YQIAEAMEVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGI 179
             + E + ++  + S ++  +KA+ ++  V +       + YPH  SGG +QR+ I  G+
Sbjct: 120 QILEEPLLINTSL-SKEQRREKALSMMAKVGLK--TEHYDRYPHMFSGGQRQRIAIARGL 176

Query: 180 SNNPRILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMY 239
             +P ++IADEP +ALDV+++AQ+L+L+  ++++   + + I+H+L VV   AD V VMY
Sbjct: 177 MLDPDVVIADEPVSALDVSVRAQVLNLMMDLQQELGLSYVFISHDLSVVEHIADEVMVMY 236

Query: 240 AGKIVEIGTVDQIFKNPLHPYTQGLLRAVP--NPLTKIEKLEAIPGTVPNLITPPGGCRF 297
            G+ VE GT DQIF NP HPYTQ LL A P  NP  + E+++ + G +P+ + PP GC F
Sbjct: 237 LGRCVEKGTKDQIFNNPRHPYTQALLSATPRLNPDDRRERIK-LSGELPSPLNPPPGCAF 295

Query: 298 HPRCPKVMSICKEKVPELKEIEPGHFVAC 326
           + RC +    C +  P+LK+   G  VAC
Sbjct: 296 NARCRRRFGPCTQLQPQLKDY-GGQLVAC 323


>sp|P45094|DPPF_HAEIN DIPEPTIDE TRANSPORT ATP-BINDING PROTEIN DPPF
           >gi|1074010|pir||E64188 dipeptide transport ATP-binding
           protein dppF - Haemophilus influenzae (strain Rd KW20)
           >gi|972898|gb|AAA95975.1| (U17295) DppF [Haemophilus
           influenzae] >gi|1574111|gb|AAC22837.1| (U32798)
           dipeptide ABC transporter, ATP-binding protein (dppF)
           [Haemophilus influenzae Rd]
           Length = 327
           
 Score =  217 bits (548), Expect = 1e-55
 Identities = 121/328 (36%), Positives = 199/328 (59%), Gaps = 22/328 (6%)

Query: 7   PILQVRNLTVHFYTYAGI------VKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQ 60
           P+L    L  ++    G+      VKA++ VSF + +G+T A+VGE+GCGKS   R +T 
Sbjct: 10  PLLNAIGLKKYYPVKKGLFAKPQQVKALDGVSFQLERGKTLAVVGESGCGKSTLGRLLT- 68

Query: 61  LIESPGRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGY 120
           +IE P    +G+ LYY+    + +     + E + +R  +I  +FQ+P+ASL+P   +G 
Sbjct: 69  MIEEP---TKGE-LYYKGHNFLEN-----DSETKALRRKKIQIVFQNPYASLNPRKKIGS 119

Query: 121 QIAEAMEVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGIS 180
            + E + ++ K+ S KE  +K + +++ V +   A   + YPH  SGG +QR+ I  G+ 
Sbjct: 120 ILEEPLIINTKL-SAKERREKVLSMMEKVGLR--AEFYDRYPHMFSGGQRQRIAIARGLM 176

Query: 181 NNPRILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYA 240
            +P +++ADEP +ALDV+++AQ+L+L+  ++++   + + I+H+L VV   AD V VMY 
Sbjct: 177 LDPDVVVADEPVSALDVSVRAQVLNLMMDLQDELGLSYVFISHDLSVVEHIADEVMVMYL 236

Query: 241 GKIVEIGTVDQIFKNPLHPYTQGLLRAVP--NPLTKIEKLEAIPGTVPNLITPPGGCRFH 298
           G+ +E GT +QIF NP HPYT+ LL A P  +P  + E+++ + G +P+ I PP GC F+
Sbjct: 237 GRCIEKGTTEQIFSNPQHPYTKALLSATPRLSPNLRRERIK-LTGELPSPINPPKGCAFN 295

Query: 299 PRCPKVMSICKEKVPELKEIEPGHFVAC 326
           PRC K    C+E  P L++   G  +AC
Sbjct: 296 PRCWKATEKCRENQPHLEQHTDGKLIAC 323


>sp|P45051|OPPF_HAEIN OLIGOPEPTIDE TRANSPORT ATP-BINDING PROTEIN OPPF
           >gi|1075085|pir||B64184 oligopeptide transport
           ATP-binding protein oppF - Haemophilus influenzae
           (strain Rd KW20) >gi|1574675|gb|AAC22774.1| (U32792)
           oligopeptide ABC transporter, ATP-binding protein (oppF)
           [Haemophilus influenzae Rd]
           Length = 332
           
 Score =  217 bits (546), Expect = 2e-55
 Identities = 124/323 (38%), Positives = 191/323 (58%), Gaps = 21/323 (6%)

Query: 10  QVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIESPGRIV 69
           +++N    F+     +KA++ VSF +Y GET  +VGE+GCGKS  +RAI  L+E+     
Sbjct: 21  KIKNDKSLFFAKPQTLKAVKDVSFKLYAGETLGVVGESGCGKSTLARAIIGLVEAS---- 76

Query: 70  EGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQIAEAMEV- 128
           EG++L+         L K S ++ ++ R  +I  IFQDP ASL+P   +G  IAE +++ 
Sbjct: 77  EGEILWLGKH-----LRKQSAKQWKETR-KDIQMIFQDPLASLNPRMNIGEIIAEPLKIY 130

Query: 129 --HGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGISNNPRIL 186
             H     +KE +Q  +  LK  L+P+    +N YPHE SGG  QR+ I   +   P+++
Sbjct: 131 QPHLSAAEVKEKVQAMM--LKVGLLPN---LINRYPHEFSGGQCQRIGIARALIIEPKMI 185

Query: 187 IADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYAGKIVEI 246
           I DEP +ALDV+IQAQ+++LL  ++++   ++I I H+L VV   +DRV VMY G  +E+
Sbjct: 186 ICDEPVSALDVSIQAQVVNLLKSLQKEMGLSLIFIAHDLAVVKHISDRVLVMYLGNAMEL 245

Query: 247 GTVDQIFKNPLHPYTQGLLRAVPNPLTKIEK---LEAIPGTVPNLITPPGGCRFHPRCPK 303
           G+  +++ +  HPYT+ L+ AVP P  K+E+   +E + G +P+ I PP GC F  RC K
Sbjct: 246 GSDVEVYNDTKHPYTKALMSAVPIPDPKLERNKSIELLEGDLPSPINPPSGCVFRTRCLK 305

Query: 304 VMSICKEKVPELKEIEPGHFVAC 326
               C ++ P        HFVAC
Sbjct: 306 ADENCAKQKPPFTSQNNSHFVAC 328


>sp|P77737|OPPF_ECOLI OLIGOPEPTIDE TRANSPORT ATP-BINDING PROTEIN OPPF
           >gi|7442535|pir||B64872 oligopeptide transport
           ATP-binding protein oppF - Escherichia coli
           >gi|1742036|dbj|BAA14779.1| (D90763) Oligopeptide
           transport ATP-binding protein OppF. [Escherichia coli]
           >gi|1787500|gb|AAC74329.1| (AE000223) homolog of
           Salmonella ATP-binding protein of oligopeptide ABC
           transport system [Escherichia coli K12]
           Length = 334
           
 Score =  216 bits (545), Expect = 2e-55
 Identities = 129/332 (38%), Positives = 196/332 (58%), Gaps = 27/332 (8%)

Query: 8   ILQVRNLTVHFYTYAG---------IVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAI 58
           +L++ +L VHF    G          +KA++ V+  +Y+GET  +VGE+GCGKS  +RAI
Sbjct: 11  LLEIADLKVHFEIKDGKQWFWQPPKTLKAVDGVTLRLYEGETLGVVGESGCGKSTFARAI 70

Query: 59  TQLIESPGRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTV 118
             L+++     +G V +   +     LL +  +E R +R ++I  IFQDP ASL+P  T+
Sbjct: 71  IGLVKA----TDGHVAWLGKE-----LLGMKPDEWRAVR-SDIQMIFQDPLASLNPRMTI 120

Query: 119 GYQIAEAMEVHGKIKSIKEGIQKA-VDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGI 177
           G  IAE +  +    S +E  ++    +LK  L+P+    +N YPHE SGG  QR+ I  
Sbjct: 121 GEIIAEPLRTYHPKMSRQEVRERVKAMMLKVGLLPN---LINRYPHEFSGGQCQRIGIAR 177

Query: 178 GISNNPRILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAV 237
            +   P+++I DEP +ALDV+IQAQ+++LL +++ +   ++I I H+L VV   +DRV V
Sbjct: 178 ALILEPKLIICDEPVSALDVSIQAQVVNLLQQLQREMGLSLIFIAHDLAVVKHISDRVLV 237

Query: 238 MYAGKIVEIGTVDQIFKNPLHPYTQGLLRAVPNPLTKIEK---LEAIPGTVPNLITPPGG 294
           MY G  VE+GT D+++ NPLHPYT+ L+ AVP P   +EK   ++ + G +P+ I PP G
Sbjct: 238 MYLGHAVELGTYDEVYHNPLHPYTRALMSAVPIPDPDLEKNKTIQLLEGELPSPINPPSG 297

Query: 295 CRFHPRCPKVMSICKEKVPELKEIEPGHFVAC 326
           C F  RCP     C +  P L E    H V+C
Sbjct: 298 CVFRTRCPIAGPECAKTRPVL-EGSFRHSVSC 328


>sp|P08007|OPPF_SALTY OLIGOPEPTIDE TRANSPORT ATP-BINDING PROTEIN OPPF
           >gi|72454|pir||QREBOF oligopeptide transport protein
           oppF - Salmonella typhimurium >gi|47806|emb|CAA29043.1|
           (X05491) Opp F (AA1-334) [Salmonella typhimurium]
           Length = 334
           
 Score =  215 bits (543), Expect = 4e-55
 Identities = 128/332 (38%), Positives = 196/332 (58%), Gaps = 27/332 (8%)

Query: 8   ILQVRNLTVHFYTYAG---------IVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAI 58
           +L++ +L VHF    G          +KA++ V+  +Y+GET  +VGE+GCGKS  +RAI
Sbjct: 11  LLEIADLKVHFDIKEGKQWFWQPPKTLKAVDGVTLRLYEGETLGVVGESGCGKSTFARAI 70

Query: 59  TQLIESPGRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTV 118
             L+++     +G+V +   D     LL +  +E R++R ++I  IFQDP ASL+P  T+
Sbjct: 71  IGLVKA----TDGKVAWLGKD-----LLGMKADEWREVR-SDIQMIFQDPLASLNPRMTI 120

Query: 119 GYQIAEAMEV-HGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGI 177
           G  IAE +   H K+       +    +LK  L+P+    +N YPHE SGG  QR+ I  
Sbjct: 121 GEIIAEPLRTYHPKLSRQDVRDRVKAMMLKVGLLPN---LINRYPHEFSGGQCQRIGIAR 177

Query: 178 GISNNPRILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAV 237
            +   P+++I D+  +ALDV+IQAQ+++LL +++ +   ++I I H+L VV   +DRV V
Sbjct: 178 ALILEPKLIICDDAVSALDVSIQAQVVNLLQQLQREMGLSLIFIAHDLAVVKHISDRVLV 237

Query: 238 MYAGKIVEIGTVDQIFKNPLHPYTQGLLRAVPNP---LTKIEKLEAIPGTVPNLITPPGG 294
           MY G  VE+GT D+++ NPLHPYT+ L+ AVP P   L + +K++ + G +P+ I PP G
Sbjct: 238 MYLGHAVELGTYDEVYHNPLHPYTKALMSAVPIPDPDLERNKKIQLLEGELPSPINPPSG 297

Query: 295 CRFHPRCPKVMSICKEKVPELKEIEPGHFVAC 326
           C F  RCP     C +  P L E    H V+C
Sbjct: 298 CVFRTRCPIAGPECAQTRPVL-EGSFRHAVSC 328


>sp|P36636|SAPD_SALTY PEPTIDE TRANSPORT SYSTEM ATP-BINDING PROTEIN SAPD
           >gi|628820|pir||S39588 peptide transport system
           ATP-binding protein sapD - Salmonella typhimurium
           >gi|414211|emb|CAA52287.1| (X74212) sapD [Salmonella
           typhimurium]
           Length = 330
           
 Score =  215 bits (543), Expect = 4e-55
 Identities = 122/328 (37%), Positives = 195/328 (59%), Gaps = 14/328 (4%)

Query: 7   PILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIESPG 66
           P+L +RNLT+ F T  G VKA+++VS  + +GE   LVGE+G GKS+ ++AI  + +   
Sbjct: 2   PLLDIRNLTIEFKTSEGWVKAVDRVSMTLSEGEIRGLVGESGSGKSLIAKAICGVAKDNW 61

Query: 67  RIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQIAE-- 124
           R+   ++ +  DD   +DLL+LS  E RK+ G+ ++ IFQ+P + LDP   VG Q+ +  
Sbjct: 62  RVTADRMRF--DD---IDLLRLSSRERRKLVGHNVSMIFQEPQSCLDPSERVGRQLMQNI 116

Query: 125 -AMEVHGKI-KSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGISNN 182
            A    G+  + +    ++A+++L  V I D    + ++P+EL+ G  Q+V+I I ++N 
Sbjct: 117 PAWTYKGRWWQRLGWRKRRAIELLHRVGIKDHKEPMRSFPYELTDGECQKVMIAIALANQ 176

Query: 183 PRILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYAGK 242
           PR+LIADEPT +++ T QAQI  LL ++ +    T++LI+H+L ++++ AD++ V+Y G+
Sbjct: 177 PRLLIADEPTNSMEPTTQAQIFRLLTRLNQNSNTTILLISHDLQMLSQWADKINVLYCGQ 236

Query: 243 IVEIGTVDQIFKNPLHPYTQGLLRAVP---NPLTKIEKLEAIPGTVPNLITPPGGCRFHP 299
            VE      +   P HPYTQ L+RA+P   + +    +L  +PG +P L   P GCR  P
Sbjct: 237 TVETAPSKDLVTMPHHPYTQALIRAIPDFGSAMPHKSRLNTLPGAIPLLEQLPIGCRLGP 296

Query: 300 RCPKVMSICKEKVPELKEIEPGHFVACH 327
           RCP     C    P L   +  H  ACH
Sbjct: 297 RCPYAQREC-IITPRLTGAK-NHLYACH 322


>pir||F71130 probable oligopeptide transport ATP-binding protein appF -
           Pyrococcus horikoshii >gi|3257221|dbj|BAA29904.1|
           (AP000003) 323aa long hypothetical oligopeptide
           transport ATP-binding protein APPF [Pyrococcus
           horikoshii]
           Length = 323
           
 Score =  215 bits (543), Expect = 4e-55
 Identities = 122/334 (36%), Positives = 188/334 (55%), Gaps = 24/334 (7%)

Query: 6   EPILQVRNLTVHFYTYAGI------VKAIEKVSFDVYKGETFALVGETGCGKSVTSRAIT 59
           + +++V+NLT  F   + I      ++A++ VSF++ K E   LVGE+GCGKS   + + 
Sbjct: 4   DTLIEVKNLTKLFPVTSSILGKKISIRAVDNVSFEIKKNEILGLVGESGCGKSTLGKLLV 63

Query: 60  QLIESPGRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVG 119
           +L+E       G VL+   D     + KL  +++++ R   +  +FQ+P+ S DP  T+ 
Sbjct: 64  RLLEP----TSGTVLFKGQD-----IYKLRGKKLKEYR-KSVQMVFQNPYTSFDPRLTLF 113

Query: 120 YQIAEAMEVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGI 179
             IAE +  H    + +E +  A+   + V +  P   +  YPHELSGG  QR  I   I
Sbjct: 114 ENIAEPLYTHKLALNKEEALTLAMQYFEDVGLTPPEDFLMRYPHELSGGQLQRASIARAI 173

Query: 180 SNNPRILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMY 239
           +  P  ++ADEPT+ LD ++++ IL+L+ K++++   + + ITH+L      ADR+AVMY
Sbjct: 174 ALEPEFIVADEPTSMLDASLRSGILNLIKKLRKELHTSWLFITHDLPSAYYIADRIAVMY 233

Query: 240 AGKIVEIGTVDQIFKNPLHPYTQGLLRA----VPNPLTKIEKLEAIPGTVPNLITPPGGC 295
            GKIVEIG   ++ KNPLHPYTQ LL A     P+   K  K++      P  +   G C
Sbjct: 234 LGKIVEIGESKEVLKNPLHPYTQALLEANLPIDPDASLKEPKVKG----EPKPVFETGYC 289

Query: 296 RFHPRCPKVMSICKEKVPELKEIEPGHFVACHLY 329
           RF PRCP     CK++ P L E++  H+VAC LY
Sbjct: 290 RFFPRCPYAFEKCKKEEPPLVEVKKDHYVACWLY 323


>gb|AAA23706.1| (L08399) peripheral membrane protein [Escherichia coli]
           Length = 333
           
 Score =  215 bits (542), Expect = 6e-55
 Identities = 123/320 (38%), Positives = 196/320 (60%), Gaps = 22/320 (6%)

Query: 6   EPILQVRNLTVHFYTYAG------IVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAIT 59
           +P+LQ  +L  H+    G      +VKA++ VSF++ +G+T A+VGE+GCGKS   R +T
Sbjct: 10  QPLLQAIDLKKHYPVKKGMFAPERLVKALDGVSFNLERGKTLAVVGESGCGKSTLGRLLT 69

Query: 60  QLIESPGRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVG 119
            +IE P     G  LYY+      DLLK  + + +K+R  +I  +FQ+P+ SL+P   VG
Sbjct: 70  -MIEMP----TGGELYYQGQ----DLLK-HDPQAQKLRRQKIQIVFQNPYGSLNPRKKVG 119

Query: 120 YQIAEAMEVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGI 179
             + E + ++  + S ++  +KA+ ++  V +       + YPH  SGG +QR+ I  G+
Sbjct: 120 QILEEPLLINTSL-SKEQRREKALSMMAKVGLK--TEHYDRYPHMFSGGQRQRIAIARGL 176

Query: 180 SNNPRILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMY 239
             +P ++IADEP +ALDV+++AQ+L+L+  ++++   + + I+H+L VV   AD V VMY
Sbjct: 177 MLDPDVVIADEPVSALDVSVRAQVLNLMMDLQQELGLSYVFISHDLSVVEHIADEVMVMY 236

Query: 240 AGKIVEIGTVDQIFKNPLHPYTQGLLRAVP--NPLTKIEKLEAIPGTVPNLITPPGGCRF 297
            G+ VE GT DQIF NP HPYTQ LL A P  NP  + E+++ + G +P+ + PP GC F
Sbjct: 237 LGRCVEKGTKDQIFNNPRHPYTQALLSATPRLNPDDRRERIK-LSGELPSPLNPPPGCAF 295

Query: 298 HPRCPKVMSICKEKVPELKE 317
           + RC +    C +  P+LK+
Sbjct: 296 NARCRRRFGPCTQLQPQLKD 315


>pir||F82242 oligopeptide ABC transporter, ATP-binding protein VC1095 [imported]
           - Vibrio cholerae (group O1 strain N16961)
           >gi|9655564|gb|AAF94254.1| (AE004190) oligopeptide ABC
           transporter, ATP-binding protein [Vibrio cholerae]
           Length = 336
           
 Score =  214 bits (539), Expect = 1e-54
 Identities = 124/332 (37%), Positives = 195/332 (58%), Gaps = 27/332 (8%)

Query: 8   ILQVRNLTVHF---------YTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAI 58
           +L V++L VHF         +T    +KA++ V+  +Y+GET  +VGE+GCGKS  +RAI
Sbjct: 14  LLDVKDLKVHFNITPKSAWPWTKPVTLKAVDGVNVRLYEGETLGVVGESGCGKSTFARAI 73

Query: 59  TQLIESPGRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTV 118
             L+++      G+V++   D      L   +E  R+    +I  IFQDP ASL+P  TV
Sbjct: 74  IGLVQA----THGEVVWLGQD------LTRMQEVKRRATRKQIQMIFQDPLASLNPRMTV 123

Query: 119 GYQIAEAMEVHGKIKSIKEGIQKAVDILKSV-LIPDPARRVNNYPHELSGGMKQRVVIGI 177
           G  IAE ++      S +E   +  +++  V L+P+    +N YPHE SGG  QR+ I  
Sbjct: 124 GDIIAEPLQTFYPELSKQEVKDRVKEMMAKVGLLPNV---INRYPHEFSGGQCQRIGIAR 180

Query: 178 GISNNPRILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAV 237
            +   P+++I DEP +ALDV+IQAQ+++LL +++++   +++ I H+L VV   +DRV V
Sbjct: 181 ALILKPKMIICDEPVSALDVSIQAQVVNLLKELQKELGLSLVFIAHDLSVVKHISDRVLV 240

Query: 238 MYAGKIVEIGTVDQIFKNPLHPYTQGLLRAVPNPLTKIEK---LEAIPGTVPNLITPPGG 294
           MY G  VE+G   ++F NP HPYT+ L+ AVP P   IE+   ++ + G +P+ + PP G
Sbjct: 241 MYLGNAVELGVSKELFANPKHPYTKALMSAVPIPDPNIERNKTIQMLEGDLPSPMNPPSG 300

Query: 295 CRFHPRCPKVMSICKEKVPELKEIEPGHFVAC 326
           C F  RCP+  + C +  P +K  +  H V+C
Sbjct: 301 CVFRTRCPQATAECAKTKPVIKGSDI-HSVSC 331


>pir||C82442 probable peptide ABC transporter, ATP-binding protein VCA0588
           [imported] - Vibrio cholerae (group O1 strain N16961)
           >gi|9657999|gb|AAF96490.1| (AE004389) peptide ABC
           transporter, ATP-binding protein, putative [Vibrio
           cholerae]
           Length = 530
           
 Score =  214 bits (539), Expect = 1e-54
 Identities = 115/262 (43%), Positives = 164/262 (61%), Gaps = 5/262 (1%)

Query: 8   ILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIESPGR 67
           +L++ NL+V F          E VS  + +GET ALVGE+G GKSVT+ AI +L+     
Sbjct: 5   VLKIDNLSVGFGIAGQARPVTEGVSLTIARGETLALVGESGSGKSVTANAILRLLPKGSA 64

Query: 68  IVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQIAEAME 127
                 +++ D    VD L+ SE  +R IRG  I  IFQ+P  SL+PL+ +G Q+ E + 
Sbjct: 65  HYLSGSIHFGD----VDTLRCSERALRGIRGGRIGMIFQEPMVSLNPLHKIGKQLVETLA 120

Query: 128 VHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGISNNPRILI 187
           +H  +++     QKA++ L  V I  P  ++N YPHELSGG +QRV+I + + N P +LI
Sbjct: 121 IHRGLRATAAE-QKAIEWLGKVGIRHPEIKINAYPHELSGGERQRVMIAMALINEPELLI 179

Query: 188 ADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYAGKIVEIG 247
           ADEPTTALDV++QAQILDLL  ++++    ++ ITH+L +V   ADRVAVM +G++VE  
Sbjct: 180 ADEPTTALDVSVQAQILDLLKSLQQELGMAMLFITHDLSIVRRIADRVAVMQSGQLVETN 239

Query: 248 TVDQIFKNPLHPYTQGLLRAVP 269
               +F  P HPYTQ L+ A P
Sbjct: 240 ACHTLFAAPAHPYTQQLINADP 261


 Score =  163 bits (408), Expect = 3e-39
 Identities = 102/280 (36%), Positives = 152/280 (53%), Gaps = 30/280 (10%)

Query: 2   RKVPEP-------ILQVRNLTVHFYTYAGI-------VKAIEKVSFDVYKGETFALVGET 47
           R VP P       +LQ   L V F    G        +KA+  +SF + KG++  LVGE+
Sbjct: 262 RGVPVPTAMDAPTLLQAEKLRVWFPIKGGYFRRTQAYIKAVTDMSFTLAKGQSLGLVGES 321

Query: 48  GCGKSVTSRAITQLIESPGRI-VEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQ 106
           G GKS T  AI +L+ S G I   GQ           DL  L   E+   R +++  +FQ
Sbjct: 322 GSGKSTTGMAILKLLASQGAIRFAGQ-----------DLQALKRREMLPYR-SKMQVVFQ 369

Query: 107 DPHASLDPLYTVGYQIAEAMEVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELS 166
           DP+++L+P  +V   I E + VH ++    + I  A+  +   +  D   R + YP+E S
Sbjct: 370 DPYSALNPRMSVAQVIGEGLRVHSQLND--DEIDHAICAVMQEVGLDVDTR-HRYPNEFS 426

Query: 167 GGMKQRVVIGIGISNNPRILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLG 226
           GG +QR+ I   +   P  ++ DEPT++LD T+QAQ+LDLL  +++KY+ T + I+H+L 
Sbjct: 427 GGQRQRIAIARALVLKPEFILLDEPTSSLDRTVQAQVLDLLKDLQQKYQLTYLFISHDLA 486

Query: 227 VVAETADRVAVMYAGKIVEIGTVDQIFKNPLHPYTQGLLR 266
           V+        VM AG+IVE G    +F+NP HPYTQ L+R
Sbjct: 487 VIRALCHHTIVMKAGEIVEHGETQSLFENPSHPYTQQLVR 526


>pir||C72536 probable oligopeptide transport ATP-binding protein APE1576 -
           Aeropyrum pernix (strain K1) >gi|5105263|dbj|BAA80576.1|
           (AP000062) 377aa long hypothetical oligopeptide
           transport ATP-binding protein [Aeropyrum pernix]
           Length = 377
           
 Score =  213 bits (538), Expect = 2e-54
 Identities = 123/329 (37%), Positives = 193/329 (58%), Gaps = 26/329 (7%)

Query: 25  VKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIESPGRIV----EGQVLYYRDDG 80
           VKA++ VSF + +GE F LVGE+GCGK+ T +AI +L+++ G  V    + +VL   +  
Sbjct: 47  VKAVDGVSFSIARGEVFCLVGESGCGKTTTGKAILRLVKATGGRVFFKPKKEVLEELERR 106

Query: 81  SV-------VDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQIAEAMEVHGKIK 133
            V       VDLL +   + + +R  E+  ++QDP+ SL+P +T+   + + + +H  I 
Sbjct: 107 GVKSLGDGFVDLLAVPRRKFKPLR-RELQIVYQDPYGSLNPRFTIKRILEDPLLIHS-IG 164

Query: 134 SIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGISNNPRILIADEPTT 193
           + +E  +    +L++V +   +  ++ YPH+LSGG +QRV I      NP +++ADEP +
Sbjct: 165 NAREREEMVARMLEAVKLTPASDFMDRYPHQLSGGQRQRVAIARAFILNPSLVVADEPVS 224

Query: 194 ALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYAGKIVEIGTVDQIF 253
            LDV+I+A+IL+LL   +EK   +++ ITH+L V     DR+AVMY GKIVE G   +I 
Sbjct: 225 MLDVSIRAEILELLLGFREKLGTSLLFITHDLAVARYICDRIAVMYLGKIVETGDARRII 284

Query: 254 KNPLHPYTQGLLRAVPNP-LTKIEKLEAIP--GTVPNLITPPGGCRFHPRC-------PK 303
           + P+HPYT+ L+ A+P P  +  +KL  +P  G +P+    P GCRFHPRC        +
Sbjct: 285 ERPIHPYTKALVAAIPEPDPSNRKKLREVPIKGEIPSAAAIPPGCRFHPRCVEYEQDMDR 344

Query: 304 VMSICKEKVPELK---EIEPGHFVACHLY 329
           +  +C  K P LK   E E    V+C  Y
Sbjct: 345 LREMCPVKEPPLKRPTEGEEDRRVSCWRY 373


>pir||B69856 oligopeptide transport ATP-binding protein homolog ykfD - Bacillus
           subtilis >gi|2632021|emb|CAA05580.1| (AJ002571) YkfD
           [Bacillus subtilis] >gi|2633654|emb|CAB13157.1| (Z99110)
           similar to oligopeptide ABC transporter (permease)
           [Bacillus subtilis]
           Length = 327
           
 Score =  213 bits (537), Expect = 2e-54
 Identities = 125/319 (39%), Positives = 188/319 (58%), Gaps = 18/319 (5%)

Query: 7   PILQVRNLTVHFYT-YAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIESP 65
           P+L+V  L +HF       VKA++ V+F + +GETF LVGE+GCGKS   R + +L +  
Sbjct: 5   PLLEVSQLKMHFDAGKKRTVKAVDGVTFQIREGETFGLVGESGCGKSTLGRVLMRLYQP- 63

Query: 66  GRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQIAEA 125
               EG V Y        +L  LSE+E +     ++  IFQDP+ASL+P  TV   I E 
Sbjct: 64  ---TEGSVTYRG-----TNLHALSEKE-QFAFNRKLQMIFQDPYASLNPRMTVREIILEP 114

Query: 126 MEVHGKIKSIKEGIQKAVDILKSV-LIPDPARRVNNYPHELSGGMKQRVVIGIGISNNPR 184
           ME+H    + K  +    ++L++V L PD   R   YPHE SGG +QR+ I   +S NP 
Sbjct: 115 MEIHNLYNTHKARLSVVDELLEAVGLHPDFGSR---YPHEFSGGQRQRIGIARALSLNPE 171

Query: 185 ILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYAGKIV 244
            ++ADEP +ALDV++QAQ+++LL +++++   T + I H+L +V   +DR+ VMY G ++
Sbjct: 172 FIVADEPISALDVSVQAQVVNLLKRLQKEKGLTFLFIAHDLSMVKHISDRIGVMYLGHMM 231

Query: 245 EIGTVDQIFKNPLHPYTQGLLRAVPNPLTKIE-KLEAI--PGTVPNLITPPGGCRFHPRC 301
           EI     +++ PLHPYT+ LL ++P P  ++E K E I   G +P+ + PP GC F  RC
Sbjct: 232 EITESGTLYREPLHPYTKALLSSIPIPDPELEDKRERILLKGELPSPVNPPSGCVFRTRC 291

Query: 302 PKVMSICKEKVPELKEIEP 320
           P+     +  VP  K+  P
Sbjct: 292 PERCLNVENLVPSFKKSNP 310


>dbj|BAA97046.1| (AB015765) TrkE [Vibrio alginolyticus]
           Length = 331
           
 Score =  213 bits (536), Expect = 3e-54
 Identities = 123/328 (37%), Positives = 193/328 (58%), Gaps = 14/328 (4%)

Query: 7   PILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIESPG 66
           P+L +R+LT+   T  G+VKA++++S  + +GE   LVGE+G GKS+ ++AI  + +   
Sbjct: 2   PLLDIRHLTIEIETPQGLVKAVDRMSLTLNEGEIRGLVGESGSGKSLVAKAIVGVSKDNW 61

Query: 67  RIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQIAEAM 126
           RI   ++         +DLL+L+ +E R++   +IA IFQ+P   LDP   VG Q+ E++
Sbjct: 62  RITADRMRLGN-----IDLLQLTPKERRRVIARDIAMIFQEPSTCLDPSEEVGRQLIESI 116

Query: 127 E---VHGKI-KSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGISNN 182
                 GK  +  K   ++A+ +L  V I D  R + +YP+EL+ G  Q+V+I + I+  
Sbjct: 117 PSRAFEGKWWERFKWRKKQAIALLHKVGIKDHKRLMGSYPYELTDGECQKVMIAMAIATK 176

Query: 183 PRILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYAGK 242
           P++LIADEPT  LD   Q+QIL LL++M +    T++LI H+L  + + A R+ VMY G+
Sbjct: 177 PKLLIADEPTNDLDPITQSQILRLLSRMNQLNNTTILLIGHDLATITQWAGRITVMYCGQ 236

Query: 243 IVEIGTVDQIFKNPLHPYTQGLLRAVP---NPLTKIEKLEAIPGTVPNLITPPGGCRFHP 299
            VE     +I   P HPYT  LL+A+P   + +   +KL+++PG++P L   P GCR  P
Sbjct: 237 SVESADTSKIIAAPKHPYTDALLKAMPDFNDWVPHKQKLQSLPGSIPPLQHLPIGCRLGP 296

Query: 300 RCPKVMSICKEKVPELKEIEPGHFVACH 327
           RCP     C E +P  + I+  H   CH
Sbjct: 297 RCPYAQKQCVE-IPHTRRIK-NHKFNCH 322


>emb|CAA10912.1| (AJ222649) sapD [Erwinia chrysanthemi]
           Length = 330
           
 Score =  212 bits (533), Expect = 6e-54
 Identities = 119/327 (36%), Positives = 196/327 (59%), Gaps = 14/327 (4%)

Query: 8   ILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIESPGR 67
           +L++RN+T+ F T  G VKA+++VS ++ +GE   LVGE+G GKS+ ++AI  + +   R
Sbjct: 3   LLEIRNVTIEFLTPDGPVKAVDRVSINLNEGEIRGLVGESGSGKSLIAKAICGINKENWR 62

Query: 68  IVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQIAEAME 127
           I   +  +  DD   VD+L+L+  + RK+  + ++ IFQ+P + LDP   VG Q+ +++ 
Sbjct: 63  ITADRFRF--DD---VDMLQLTPPQRRKLVRHNMSMIFQEPQSCLDPSARVGRQLIQSIP 117

Query: 128 ---VHGKI-KSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGISNNP 183
                G+  +      ++A+++L  V I D    + ++P+EL+ G  Q+V+I I ++N P
Sbjct: 118 GWTYKGRWWQRFNWRKRRAIELLHRVGIKDHKDVMRSFPYELTEGECQKVMIAIALANQP 177

Query: 184 RILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYAGKI 243
           R+LIADEP  A++ T QAQI  LL+++ +    T++LI+H+L  +++ ADR+ V+Y G+ 
Sbjct: 178 RLLIADEPNNAMEATTQAQIFRLLSRLNQNNNTTILLISHDLQTMSKWADRINVLYCGQT 237

Query: 244 VEIGTVDQIFKNPLHPYTQGLLRAVPN---PLTKIEKLEAIPGTVPNLITPPGGCRFHPR 300
           VE    D++   P HPYTQ L+RA+P+    L    +L  +PG +P+L   P GCR  PR
Sbjct: 238 VESAVSDELISAPHHPYTQALIRAMPDFGCSLPHKSRLNTLPGAIPSLAHLPVGCRLGPR 297

Query: 301 CPKVMSICKEKVPELKEIEPGHFVACH 327
           CP     C    P +      H+ ACH
Sbjct: 298 CPYSQKQCMTAPPLIP--VRNHWYACH 322


>sp|P75552|OPPD_MYCPN OLIGOPEPTIDE TRANSPORT ATP-BINDING PROTEIN OPPD
           >gi|2146480|pir||S73940 oligopeptide transport
           ATP-binding protein oppD - Mycoplasma pneumoniae (strain
           ATCC 29342) >gi|1674316|gb|AAB96262.1| (AE000058)
           oligopeptide transport ATP-binding protein OppD
           [Mycoplasma pneumoniae]
           Length = 423
           
 Score =  210 bits (530), Expect = 1e-53
 Identities = 123/358 (34%), Positives = 194/358 (53%), Gaps = 43/358 (12%)

Query: 8   ILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIESPGR 67
           IL +R+L V F    GI++A+  V   V KG    +VGE+G GKSV  ++I     + G 
Sbjct: 21  ILDIRDLHVSFKVKDGIMQAVRGVDLKVKKGSIVGIVGESGSGKSVCVKSIIGF--NDGA 78

Query: 68  IVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQIAEAME 127
               +++ +++    +D+ K+ + + +  RG  ++YI QDP  SL+P  T+G Q+ EA+ 
Sbjct: 79  KTTAKLMNFKN----IDISKMKKHQWQYYRGTYVSYISQDPLFSLNPTMTIGRQVKEAIY 134

Query: 128 VHGK------------------------------------IKSIKEGIQ-KAVDILKSVL 150
           V  K                                     K+ K  +  K ++IL  + 
Sbjct: 135 VSCKRRYYQTKSDLKYDLQTERIDLDTYKEKLAQAKETYKAKTTKAAVHAKTLEILNFIG 194

Query: 151 IPDPARRVNNYPHELSGGMKQRVVIGIGISNNPRILIADEPTTALDVTIQAQILDLLNKM 210
           I    +R+  +P E SGGM+QR+VI I ++  P ++IADEPTTALDVTIQA+ L+L+ ++
Sbjct: 195 IDQAEKRLKAFPSEFSGGMRQRIVIAIAVATEPDLIIADEPTTALDVTIQAKALNLIKQL 254

Query: 211 KEKYKATVILITHNLGVVAETADRVAVMYAGKIVEIGTVDQIFKNPLHPYTQGLLRAVPN 270
           ++    T+I I+HN+ ++A   D V VMYAG++VE G V++IF NP+HPYT  L+ ++P 
Sbjct: 255 RDLLNITIIFISHNISLIANFCDFVYVMYAGRLVEKGLVEEIFTNPVHPYTWALMASIPE 314

Query: 271 PLTKIEKLEAIPGTVPNLITPPGGCRFHPRCPKVMSICKEKVPELKEIEPGHFVACHL 328
              K   L +IPG +PN+++PP G  F  R    ++I  E  P   ++   H  A  L
Sbjct: 315 GTDKNAPLTSIPGYIPNMLSPPKGDAFAARNQFALAIDFEHQPPFFDVTETHKAATWL 372


>sp|P36635|SAPD_ECOLI PEPTIDE TRANSPORT SYSTEM ATP-BINDING PROTEIN SAPD
           >gi|7445933|pir||F64877 peptide transport system
           ATP-binding protein sapD - Escherichia coli
           >gi|1279403|emb|CAA65940.1| (X97282) SapD protein
           [Escherichia coli] >gi|1742104|dbj|BAA14844.1| (D90766)
           Peptide transport system ATP-binding protein SapD
           (fragment). [Escherichia coli]
           >gi|1742113|dbj|BAA14852.1| (D90767) Peptide transport
           system ATP-binding protein SapD (fragment). [Escherichia
           coli] >gi|1742122|dbj|BAA14861.1| (D90768) Peptide
           transport system ATP-binding protein SapD (fragment).
           [Escherichia coli] >gi|1787548|gb|AAC74373.1| (AE000227)
           putative ATP-binding protein of peptide transport system
           [Escherichia coli K12]
           Length = 330
           
 Score =  210 bits (529), Expect = 2e-53
 Identities = 121/328 (36%), Positives = 194/328 (58%), Gaps = 14/328 (4%)

Query: 7   PILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIESPG 66
           P+L +RNLT+ F T    VKA+++VS  + +GE   LVGE+G GKS+ ++AI  + +   
Sbjct: 2   PLLDIRNLTIEFKTGDEWVKAVDRVSMTLTEGEIRGLVGESGSGKSLIAKAICGVNKDNW 61

Query: 67  RIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQIAE-- 124
           R+   ++ +  DD   +DLL+LS  E RK+ G+ ++ IFQ+P + LDP   VG Q+ +  
Sbjct: 62  RVTADRMRF--DD---IDLLRLSARERRKLVGHNVSMIFQEPQSCLDPSERVGRQLMQNI 116

Query: 125 -AMEVHGKI-KSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGISNN 182
            A    G+  +      ++A+++L  V I D    + ++P+EL+ G  Q+V+I I ++N 
Sbjct: 117 PAWTYKGRWWQRFGWRKRRAIELLHRVGIKDHKDAMRSFPYELTEGECQKVMIAIALANQ 176

Query: 183 PRILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYAGK 242
           PR+LIADEPT +++ T QAQI  LL ++ +    T++LI+H+L ++++ AD++ V+Y G+
Sbjct: 177 PRLLIADEPTNSMEPTTQAQIFRLLTRLNQNSNTTILLISHDLQMLSQWADKINVLYCGQ 236

Query: 243 IVEIGTVDQIFKNPLHPYTQGLLRAVP---NPLTKIEKLEAIPGTVPNLITPPGGCRFHP 299
            VE     ++   P HPYTQ L+RA+P   + +    +L  +PG +P L   P GCR  P
Sbjct: 237 TVETAPSKELVTMPHHPYTQALIRAIPDFGSAMPHKSRLNTLPGAIPLLEQLPIGCRLGP 296

Query: 300 RCPKVMSICKEKVPELKEIEPGHFVACH 327
           RCP     C    P L   +  H  ACH
Sbjct: 297 RCPYAQREC-IVTPRLTGAK-NHLYACH 322


>gb|AAK42735.1| Dipeptide ABC transporter ATP binding protein (dppF-3) [Sulfolobus
           solfataricus]
           Length = 323
           
 Score =  210 bits (528), Expect = 2e-53
 Identities = 122/307 (39%), Positives = 179/307 (57%), Gaps = 29/307 (9%)

Query: 25  VKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIESPGRIVEGQVLYYRDDGSVVD 84
           V+A++ VS ++ KGE   +VGE+G GK+   + +  L +  G    G +++         
Sbjct: 35  VRALDNVSVEIRKGEVLGVVGESGSGKTTLGKVLATLEKPTG----GNLIFMG------- 83

Query: 85  LLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQIAEAMEV--HGKIKSIKEGIQKA 142
            +++++  I  +R   I  +FQ+P  S++P   V   + EAM+     ++K + E +   
Sbjct: 84  -MEVNDRNINHVR-KHIHMVFQNPMTSINPRMKVKDIVREAMKEKREERVKKLLEEVGLD 141

Query: 143 VDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGISNNPRILIADEPTTALDVTIQAQ 202
            + +K           + YP ELSGG  QRV I   ++  P  LI DEPT+ALD ++QAQ
Sbjct: 142 YNYVK-----------DKYPRELSGGQTQRVAIARALAKEPDFLILDEPTSALDASVQAQ 190

Query: 203 ILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYAGKIVEIGTVDQIFKNPLHPYTQ 262
           IL+LL  ++++ K T + ITHN+ V    +DRV +MYAGKIVE G   ++   P+HPYTQ
Sbjct: 191 ILNLLVDLQKERKLTYLFITHNIAVARYISDRVIIMYAGKIVEEGNTKEVISEPMHPYTQ 250

Query: 263 GLLRAVPNPLTKIEKLEAIPGTVPNLITPPGGCRFHPRCPKVMSICKEKVPELKEIEPGH 322
            LL +VP  L K ++L+   G VP+LI PP GCRF+PRCP  MS+CKEK P L EI  G 
Sbjct: 251 SLLSSVPE-LGK-KELKPPSGEVPSLINPPSGCRFNPRCPFAMSVCKEKEPPLVEIN-GR 307

Query: 323 FVACHLY 329
            VAC LY
Sbjct: 308 KVACWLY 314


>gb|AAF28110.1|AF153317_2 (AF153317) SapD [Shigella dysenteriae]
           Length = 330
           
 Score =  208 bits (525), Expect = 6e-53
 Identities = 121/328 (36%), Positives = 193/328 (57%), Gaps = 14/328 (4%)

Query: 7   PILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIESPG 66
           P+L +RNLT+ F T    VKA+++VS  + +GE   LVGE+G GKS+ ++AI  + +   
Sbjct: 2   PLLDIRNLTIEFKTGDEWVKAVDRVSMTLTEGEIRGLVGESGSGKSLIAKAICGVNKDNW 61

Query: 67  RIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQIAE-- 124
           R+   ++ +  DD   +DLL LS  E RK+ G+ ++ IFQ+P + LDP   VG Q+ +  
Sbjct: 62  RVTADRMRF--DD---IDLLGLSARERRKLVGHNVSMIFQEPQSCLDPSERVGRQLMQNI 116

Query: 125 -AMEVHGKI-KSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGISNN 182
            A    G+  +      ++A+++L  V I D    + ++P+EL+ G  Q+V+I I ++N 
Sbjct: 117 PAWTYKGRWWQRFVWRKRRAIELLHRVGIKDHKDAMRSFPYELTEGECQKVMIAIALANQ 176

Query: 183 PRILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYAGK 242
           PR+LIADEPT +++ T QAQI  LL ++ +    T++LI+H+L ++++ AD++ V+Y G+
Sbjct: 177 PRLLIADEPTNSMEPTTQAQIFRLLTRLNQNSNTTILLISHDLQMLSQWADKINVLYCGQ 236

Query: 243 IVEIGTVDQIFKNPLHPYTQGLLRAVP---NPLTKIEKLEAIPGTVPNLITPPGGCRFHP 299
            VE     ++   P HPYTQ L+RA+P   + +    +L  +PG +P L   P GCR  P
Sbjct: 237 TVETAPSKELVTMPHHPYTQALIRAIPDFGSAMPHKSRLNTLPGAIPLLEQLPIGCRLGP 296

Query: 300 RCPKVMSICKEKVPELKEIEPGHFVACH 327
           RCP     C    P L   +  H  ACH
Sbjct: 297 RCPYAQREC-IVTPRLTGAK-NHLYACH 322


>gb|AAK43146.1| ABC transporter, ATP binding protein [Sulfolobus solfataricus]
           Length = 331
           
 Score =  208 bits (524), Expect = 7e-53
 Identities = 116/321 (36%), Positives = 181/321 (56%), Gaps = 7/321 (2%)

Query: 9   LQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIESPGRI 68
           + V+NL V + +  GI+K +  VS D+ + +   + GE+G GKS  +  I   +  P  +
Sbjct: 6   ISVKNLNVGYLSDYGIIKVLRNVSIDIPESKIIGVAGESGSGKSTLATTIMGFVNPPLYV 65

Query: 69  VEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQIAEAMEV 128
             G ++      S  D+L +S +E+ KIRG+ I+Y+ Q    SL+P+  V     + ++ 
Sbjct: 66  ERGSIIV----DSKYDILSMSRDELNKIRGSVISYVPQAAQNSLNPIRKVKETFTDILKA 121

Query: 129 HGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGISNNPRILIA 188
            G        I    + L+ V + D  + ++ YP +LSGGMKQRVVI I +  NP+ILI 
Sbjct: 122 KGM--DYYANIDVVYNTLEEVGLTD-RQVLDMYPFQLSGGMKQRVVIAISLLLNPKILIM 178

Query: 189 DEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYAGKIVEIGT 248
           DEPTT LDV +Q +IL LL K++++   T+++I+H++ ++ + +D +AVMY G+IVE G 
Sbjct: 179 DEPTTGLDVVVQYEILKLLKKIQKEKDLTLVVISHDIAMLFQISDYIAVMYGGQIVEYGK 238

Query: 249 VDQIFKNPLHPYTQGLLRAVPNPLTKIEKLEAIPGTVPNLITPPGGCRFHPRCPKVMSIC 308
            + + +   HPYT  LL +VP   ++ +KL  IPG     I  P GC F  RCP V S C
Sbjct: 239 YNTLLEEAYHPYTYLLLSSVPTVRSRGKKLPRIPGDFEGFIRYPKGCVFSSRCPFVTSTC 298

Query: 309 KEKVPELKEIEPGHFVACHLY 329
           KE  P++   +   F  C  Y
Sbjct: 299 KEVPPQIVAYDKFGFYKCIRY 319


>pir||T03431 probable transport protein accB - Agrobacterium tumefaciens plasmid
           pTiC58 >gi|3153178|gb|AAC17198.1| (AF010180) AccB
           [Agrobacterium tumefaciens]
           Length = 321
           
 Score =  207 bits (521), Expect = 2e-52
 Identities = 121/321 (37%), Positives = 179/321 (55%), Gaps = 18/321 (5%)

Query: 8   ILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIESPGR 67
           +L VR+L V     A  +  I  VSF +  G+T  LVGE+GCGKS+T  AI + +  P  
Sbjct: 13  LLTVRDLIVQ--VPARDITIINGVSFSLDAGQTLGLVGESGCGKSMTCYAIAKAL--PRG 68

Query: 68  IVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQIAEAME 127
           I +       D G   D                IA I+QDP +SL+P++++GY +  ++ 
Sbjct: 69  ISQTGGTIELDSGPKAD------------GKPAIAMIYQDPTSSLNPVHSIGYYLESSLY 116

Query: 128 VHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGISNNPRILI 187
            H  ++   +   +A+ +L+ V I     R+ +YPHE SGGM QRV+I   ++  P+++I
Sbjct: 117 RHQGLEG-NDARLEAMRLLERVGIDRAKSRLRSYPHEYSGGMNQRVMIAHALAAKPKLMI 175

Query: 188 ADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYAGKIVEIG 247
           ADEPTTALDVT QAQIL LL +++ +    +++++H+LGV+A  ADR AVMY GKIVE  
Sbjct: 176 ADEPTTALDVTTQAQILHLLEELRSETGMALLIVSHDLGVIARLADRAAVMYCGKIVETA 235

Query: 248 TVDQIFKNPLHPYTQGLLRAVPN-PLTKIEKLEAIPGTVPNLITPPGGCRFHPRCPKVMS 306
            V ++ +   HPY + L+  +P      +E    IPG+VP L   P GC +HPRCP+   
Sbjct: 236 PVAELLERAAHPYARALIGCMPTIDADDLEPPVPIPGSVPLLDNLPAGCYYHPRCPRASE 295

Query: 307 ICKEKVPELKEIEPGHFVACH 327
            C    P    +   H  AC+
Sbjct: 296 QCSVSFPGPVNVGAFHDAACY 316


>pir||S75333 oligopeptide transport protein oppF - Synechocystis sp.  (strain
           PCC 6803) >gi|1652324|dbj|BAA17247.1| (D90904)
           oligopeptide transport ATP-binding protein OppF
           [Synechocystis sp.]
           Length = 650
           
 Score =  206 bits (520), Expect = 2e-52
 Identities = 130/322 (40%), Positives = 185/322 (57%), Gaps = 39/322 (12%)

Query: 8   ILQVRNLTVHFYTYAGIVK--AIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIESP 65
           IL VR L + F       K  A++ V F++ +GE   +VGE+G GKSVTS  I  L+  P
Sbjct: 38  ILAVRQLEIAFPDADTREKLLAVKGVDFELERGEILGIVGESGSGKSVTSLGIMGLVPKP 97

Query: 66  GRIVEGQVL--YYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQIA 123
           G +     +  + +   S V+L+ L E + R+ RG +IA IFQ+P +SL+P+YT+G+QI 
Sbjct: 98  GWVEPSSEIDFFAQAQSSPVNLVALPEGDKRQYRGGKIAMIFQEPMSSLNPVYTIGFQII 157

Query: 124 EAMEVHGKIKSIKEGIQKAVDILKSVLI----------------PDPARRVNN------- 160
           EA+ +H  +   +E   +A+ +L+ V +                  P  +V         
Sbjct: 158 EAIRLHQNVTQ-EEAQNQAIALLQEVRVLPKDEVLEEEFLAQEQAQPRGKVTQNLASYIQ 216

Query: 161 ---------YPHELSGGMKQRVVIGIGISNNPRILIADEPTTALDVTIQAQILDLLNKM- 210
                    YPHELSGG  QRV+I + IS NPR+LIADEPTTALDVT+QA+IL LL  + 
Sbjct: 217 QRKQSFLKRYPHELSGGQLQRVMIAMAISANPRLLIADEPTTALDVTVQAEILRLLRDLC 276

Query: 211 KEKYKATVILITHNLGVVAETADRVAVMYAGKIVEIGTVDQIFKNPLHPYTQGLLRAVPN 270
           K+  + ++I I+H+LGV+ E ADRVAVMY G+IVE G  +QI  +P HPYT+GLL   P 
Sbjct: 277 KQHQEMSLIFISHDLGVINEIADRVAVMYRGEIVEQGLKEQILHSPQHPYTKGLLACRPR 336

Query: 271 PLTKIEKLEAIPGTVPNLITPP 292
              +++ L  + G   N   PP
Sbjct: 337 LEIQLDHLPTV-GDFLNADGPP 357


 Score =  187 bits (469), Expect = 2e-46
 Identities = 106/269 (39%), Positives = 165/269 (60%), Gaps = 16/269 (5%)

Query: 7   PILQVRNLTVHF-----YTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQL 61
           P+L+V+NLTV +     +    + KA+  VSF VY GET  LVGE+GCGKS  +RA+ +L
Sbjct: 380 PLLEVQNLTVSYGQGGLFGKKSVFKAVNDVSFQVYPGETLGLVGESGCGKSTLARALLRL 439

Query: 62  IESPGRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQ 121
                 I  G++++   DG  V  L    ++ R++R  E+  IFQ+P+ SL+P  T+G  
Sbjct: 440 TP----IQTGRIIF---DGQNVAALPEKSQQWRRLR-REMQIIFQNPYNSLNPRMTIGRA 491

Query: 122 IAEAMEVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGISN 181
           I E + +H   +S K+  Q+  ++L+ V I    +  N YPHELSGG +QR+ I   ++ 
Sbjct: 492 IQEPLIIHEPKQSTKQQRQRVAELLERVGISP--QWFNRYPHELSGGQRQRICIARALAL 549

Query: 182 NPRILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYAG 241
           NPR +I DE  +ALDV++QAQ+L+LL +++   + T I I+H+L VV    DR+ VM  G
Sbjct: 550 NPRFIICDESVSALDVSVQAQVLNLLKELQRDLQLTYIFISHDLSVVRFMGDRIMVMNRG 609

Query: 242 KIVE-IGTVDQIFKNPLHPYTQGLLRAVP 269
           ++ E I T  +I +NP   YT+ L++++P
Sbjct: 610 QLAEPINTAQEIIENPQSAYTKKLIQSIP 638


>pir||H70788 probable peptidetransport system ABC-transporter ATP-binding
           protein - Mycobacterium tuberculosis (strain H37RV)
           >gi|2960087|emb|CAA17985.1| (AL022121) dppD
           [Mycobacterium tuberculosis]
           Length = 548
           
 Score =  205 bits (515), Expect = 8e-52
 Identities = 110/264 (41%), Positives = 167/264 (62%), Gaps = 11/264 (4%)

Query: 7   PILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIESPG 66
           P+L V  L V F T A    A+  V   V  G+T A+VGE+G GKS T+ AI  L+ + G
Sbjct: 7   PLLSVEGLEVTFGTDA---PAVCGVDLAVRSGQTVAVVGESGSGKSTTAAAILGLLPAGG 63

Query: 67  RIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQIAEAM 126
           RI  G+V++   DG   D+     + +R IRG EI Y+ QDP  +L+P++ VG+Q+ EA+
Sbjct: 64  RITAGRVVF---DGR--DITGADAKRLRSIRGREIGYVPQDPMTNLNPVWKVGFQVTEAL 118

Query: 127 EVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGISNNPRIL 186
             +   ++ +   ++AV++L    +PDPA++   YPH+LSGGM QR +I IG++  PR+L
Sbjct: 119 RANTDGRAAR---RRAVELLAEAGLPDPAKQAGRYPHQLSGGMCQRALIAIGLAGRPRLL 175

Query: 187 IADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYAGKIVEI 246
           IADEPT+ALDVT+Q Q+LD L  + ++    ++LITH+L + A+ A+ V V+  G +VE 
Sbjct: 176 IADEPTSALDVTVQRQVLDHLQGLTDELGTALLLITHDLALAAQRAEAVVVVRRGVVVES 235

Query: 247 GTVDQIFKNPLHPYTQGLLRAVPN 270
           G    I ++P H YT+ L+ A P+
Sbjct: 236 GAAQSILQSPQHEYTRRLVAAAPS 259


 Score =  153 bits (384), Expect = 2e-36
 Identities = 88/246 (35%), Positives = 146/246 (58%), Gaps = 16/246 (6%)

Query: 26  KAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIESPGRIVEGQVLYYRDDGSVVDL 85
           +A++ VSF + +  T A+VGE+G GKS  +R +  L++       G V++   DG+  D+
Sbjct: 305 RAVDGVSFRLPRASTLAIVGESGSGKSTLARMVLGLLQP----TSGTVVF---DGTY-DV 356

Query: 86  LKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQIAEAMEVH--GKIKSIKEGIQKAV 143
             L+ +++   R   +  +FQ+P++SLDP+Y+V   I E + VH  G  +  +  +++ V
Sbjct: 357 GALARDQVLAFR-RRVQPVFQNPYSSLDPMYSVFRAIEEPLRVHHVGDRRQRQRAVRELV 415

Query: 144 DILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGISNNPRILIADEPTTALDVTIQAQI 203
           D      +  P+  +   P ELSGG +QRV I   ++  P +L+ DE  +ALDV +QAQI
Sbjct: 416 D-----QVALPSSILGRRPRELSGGQRQRVAIARALALRPEVLVCDEAVSALDVLVQAQI 470

Query: 204 LDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYAGKIVEIGTVDQIFKNPLHPYTQG 263
           LDLL  ++     T + I+H+L V+ + AD V VM AG++VE  + +++F  P H YT+ 
Sbjct: 471 LDLLADLQADLGLTYLFISHDLAVIRQIADDVLVMRAGRVVEHASTEEVFSRPRHEYTRQ 530

Query: 264 LLRAVP 269
           LL+A+P
Sbjct: 531 LLQAIP 536


>gi|10954941 Probable accB [Agrobacterium tumefaciens]
           >gi|6498294|dbj|BAA87746.1| (AB016260) Probable accB
           [Agrobacterium tumefaciens]
           Length = 321
           
 Score =  205 bits (515), Expect = 8e-52
 Identities = 120/321 (37%), Positives = 182/321 (56%), Gaps = 18/321 (5%)

Query: 8   ILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIESPGR 67
           +L VR+L V     A  +  I  VSF +  G+T  LVGE+GCGKS+T  AI + +  P  
Sbjct: 13  LLTVRDLVVQ--VPARDITIINGVSFSLDAGQTLGLVGESGCGKSMTCYAIAKAL--PRG 68

Query: 68  IVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQIAEAME 127
           I +         G  ++L    + + +      IA I+QDP +SL+P++++GY +  ++ 
Sbjct: 69  ISQ--------TGGTIELNSGPKADGKPA----IAMIYQDPTSSLNPVHSIGYYLESSLY 116

Query: 128 VHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGISNNPRILI 187
            H  ++   +   +A+ +L+ V I     R+ +YPHE SGGM QRV+I       P+++I
Sbjct: 117 RHQGLEG-NDARLEAMRLLERVGIDRAKSRLRSYPHEFSGGMNQRVMIATRSLAKPKLMI 175

Query: 188 ADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYAGKIVEIG 247
           ADEPTTALDVT QAQIL LL +++ +    +++++H+LGV+A  ADR AVMY GKIVE  
Sbjct: 176 ADEPTTALDVTTQAQILHLLEELRSETGMALLIVSHDLGVIARLADRAAVMYCGKIVETA 235

Query: 248 TVDQIFKNPLHPYTQGLLRAVPN-PLTKIEKLEAIPGTVPNLITPPGGCRFHPRCPKVMS 306
            V ++ ++  HPY + L+  +P      +E    IPG+VP L   P GC +HPRCP+   
Sbjct: 236 PVAELLEHAAHPYARALIGCMPTIDADDLEPPVPIPGSVPLLDNLPAGCYYHPRCPRASE 295

Query: 307 ICKEKVPELKEIEPGHFVACH 327
            C    P    +   H  AC+
Sbjct: 296 QCSVSFPGPVNVGAFHDAACY 316


>gb|AAK42789.1| ABC transporter, ATP binding protein [Sulfolobus solfataricus]
           Length = 362
           
 Score =  204 bits (514), Expect = 1e-51
 Identities = 115/323 (35%), Positives = 196/323 (60%), Gaps = 11/323 (3%)

Query: 8   ILQVRNLTVHFYT-YAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIESPG 66
           IL+V NL V +    + I+KA+  VSF V KGE   ++GE+G GK+    AI + I  PG
Sbjct: 45  ILEVHNLNVIYDEGNSRIIKAVNDVSFGVEKGEILGIIGESGSGKTTLISAILRAIRPPG 104

Query: 67  RIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQIAEAM 126
           +I+ G+V++     + +D+  ++ +E RK+   +I+Y+ Q    +L+P+  +        
Sbjct: 105 KIISGKVIF-----NGMDIFSMTIDEFRKLLWKDISYVPQASQNALNPVLPISEIFYHEA 159

Query: 127 EVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGISNNPRIL 186
             HG+    K  I++A ++LK V + DPAR +  YP +LSGGMKQRV+I + +  NP+++
Sbjct: 160 ISHGEADK-KRVIERASELLKLVGL-DPARVLKMYPFQLSGGMKQRVMIALSLLLNPKLI 217

Query: 187 IADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYAGKIVEI 246
           + DEPT+ALD+  Q  +L L+  + ++   T++ +TH++  +A+ A+R+ VMY G ++E 
Sbjct: 218 LMDEPTSALDMLNQELLLKLIKNINQEMGVTIVYVTHDILNIAQIANRLLVMYKGYVMEE 277

Query: 247 GTVDQIFKNPLHPYTQGLLRAVPNPLTKIEKLEAIPGTVPNLITPPGGCRFHPRCPKVMS 306
           G  ++I K+PL+PYT  L+ ++P+   ++ K+  +P   P L++   GC F  RC K   
Sbjct: 278 GKTEEIIKSPLNPYTSLLVSSIPSLKGEV-KVINVPLDEP-LVSKEKGCPFLARCSKAFG 335

Query: 307 ICKEKVPELKEIEPGHFVACHLY 329
            CKE++PE++ +     V CHLY
Sbjct: 336 RCKEELPEIRLVY-DRKVRCHLY 357


>pir||B72282 oligopeptide ABC transporter, ATP-binding protein - Thermotoga
           maritima (strain MSB8)
           >gi|4981773|gb|AAD36295.1|AE001778_16 (AE001778)
           oligopeptide ABC transporter, ATP-binding protein
           [Thermotoga maritima]
           Length = 326
           
 Score =  204 bits (514), Expect = 1e-51
 Identities = 123/331 (37%), Positives = 199/331 (59%), Gaps = 19/331 (5%)

Query: 4   VPEPILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIE 63
           V E +L VR+L +++ T  G VKA++ VSFD+ +GE   + GE+GCGKS     +  L++
Sbjct: 4   VAEVVLDVRDLRIYYRTLYGYVKAVDGVSFDIKRGEILGIAGESGCGKSTLGNGLI-LLK 62

Query: 64  SPGRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQIA 123
            P + + G+ +    DG   +++ LS +E+RK+R  +I+ I Q    +++P   +   I 
Sbjct: 63  PPMKYMGGEAIL---DGK--NIMALSPKELRKVRYEKISIIPQYAMDAMNPTKKIKQIID 117

Query: 124 EAMEVHGKIKSIKEGIQKAVDILKSVL-IPDPARRV-NNYPHELSGGMKQRVVIGIGISN 181
           + +  HG      E  ++  D+++  L I +  ++V N YP ELSGGMKQR+V+ I    
Sbjct: 118 DLLHEHG------ESFERKKDVIEERLEIVNLGKKVLNMYPIELSGGMKQRMVMVISTLM 171

Query: 182 NPRILIADEPTTALDVTIQAQILDLLNKMKEK-YKATVILITHNLGVVAETADRVAVMYA 240
           NP +LIADE T+ALDV+ Q  ++ +L +M+EK    ++  ITH+L V+ + AD+V V+YA
Sbjct: 172 NPDVLIADEITSALDVSSQRSVIQMLYEMREKEIMGSLAFITHDLSVLYQIADKVMVLYA 231

Query: 241 GKIVEIGTVDQIFKNPLHPYTQGLLRAVPNPLTKIE--KLEAIPGTVPNLITPPGGCRFH 298
           G++ EI  ++ I + PLHPYT+ LL ++P    +    KL+ IPG  P+L+    GCRF 
Sbjct: 232 GRVAEISPMEDIIQEPLHPYTKMLLSSLPKIGVRYSQTKLKGIPGYPPSLLNIGPGCRFR 291

Query: 299 PRCPKVMSICKEKVPELKEIEPGHFVACHLY 329
            RCP     C E+ P + +++ G  V+C L+
Sbjct: 292 DRCPYAFEKC-EQDPPVFDVD-GRKVSCWLF 320


>pir||E82170 peptide ABC transporter, ATP-binding protein VC1683 [imported] -
           Vibrio cholerae (group O1 strain N16961)
           >gi|9656199|gb|AAF94833.1| (AE004246) peptide ABC
           transporter, ATP-binding protein [Vibrio cholerae]
           Length = 331
           
 Score =  204 bits (513), Expect = 1e-51
 Identities = 118/328 (35%), Positives = 191/328 (57%), Gaps = 14/328 (4%)

Query: 7   PILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIESPG 66
           P+L +R+LT+   T  G+VKA++++S  + +GE   LVGE+G GKS+ ++AI  + +   
Sbjct: 2   PLLDIRHLTIEIDTPQGLVKAVDRMSLTMNEGEIRGLVGESGSGKSLVAKAIVGICKENW 61

Query: 67  RIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQIAEAM 126
           R+   ++         +DLL+L+  E R++   ++A IFQ+P   LDP   VG Q+ E++
Sbjct: 62  RVTADRMRLGN-----IDLLQLTPRERRRVIARDVAMIFQEPSTCLDPSEEVGRQLIESI 116

Query: 127 EVHGKIKSIKEGI----QKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGISNN 182
                     E      ++A+ +L  V I D    +++YP+EL+ G  Q+V+I + I+  
Sbjct: 117 PFRTFEGRWWERFTWRKKQAIALLHKVGIKDHKDIMSSYPYELTDGECQKVMIAMAIAAK 176

Query: 183 PRILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYAGK 242
           P++LIADEPT  +D   Q+QIL LL++M +    +++LI H+L  + + ADR+ VMY G+
Sbjct: 177 PKLLIADEPTNDVDPITQSQILRLLSRMNQVNNTSILLIGHDLTTITQWADRITVMYCGQ 236

Query: 243 IVEIGTVDQIFKNPLHPYTQGLLRAVPNPLTKI---EKLEAIPGTVPNLITPPGGCRFHP 299
            VE     +I   P HPYT  LL+A+P+    I   +KL+++PG++P L   P GCR  P
Sbjct: 237 SVESAETAKIVAEPKHPYTAALLKAMPDFSDWIPHKQKLQSLPGSIPPLQHLPIGCRLGP 296

Query: 300 RCPKVMSICKEKVPELKEIEPGHFVACH 327
           RCP     C E VP  + ++  H  +CH
Sbjct: 297 RCPYAQRQCVE-VPHSRWVK-NHKFSCH 322


>gb|AAA50595.1| (U08186) ATP-dependent oligopeptide transport protein D [Thermotoga
           maritima]
           Length = 277
           
 Score =  203 bits (511), Expect = 2e-51
 Identities = 109/268 (40%), Positives = 169/268 (62%), Gaps = 8/268 (2%)

Query: 6   EPILQVRNLTVHF----YTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQL 61
           E ++  +NL  ++    +    +VKA++ VS D+   E + + GE+GCGKS   +A+  L
Sbjct: 2   ETLISGKNLKAYYVLDLWGSKKVVKAVDNVSLDILPNEIYGIAGESGCGKSTLLKALLAL 61

Query: 62  IESPGRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQ 121
           ++ P R+++G++LY   +G   ++  L  E IRK+R + I+YI Q     L+P+  V   
Sbjct: 62  LDPPLRLMDGELLY-NIEGRPTNVTLLKSETIRKLRWSFISYIPQGSMHVLNPVKRVRDT 120

Query: 122 IAEAMEVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGISN 181
             E +  H K K  KE +  AV  LK + +P+  R +N +PH+LSGGM+QRV I +    
Sbjct: 121 FIEILSSHVK-KQTKEFLDLAVQHLKDLGLPE--RVLNMFPHQLSGGMRQRVTIALATVL 177

Query: 182 NPRILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYAG 241
            PR++ ADEPTTALDV  Q  ++ L+ K++   K TV+L+TH++GV A+   R+A+MYAG
Sbjct: 178 KPRVIFADEPTTALDVVAQRAVMQLIRKIQNDLKNTVVLVTHDMGVHAQITTRMAIMYAG 237

Query: 242 KIVEIGTVDQIFKNPLHPYTQGLLRAVP 269
           KIVE G   +IFKNPLHPYT+ L++++P
Sbjct: 238 KIVEEGPTLEIFKNPLHPYTRYLIQSLP 265


>emb|CAA68076.1| (X99740) oligopeptide transport ATP-binding protein homolog
           [Mycoplasma hominis]
           Length = 388
           
 Score =  203 bits (510), Expect = 3e-51
 Identities = 130/325 (40%), Positives = 185/325 (56%), Gaps = 12/325 (3%)

Query: 8   ILQVRNLTVHF-YTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIESPG 66
           IL+VRNL V F   +   +  +  V  DV++GE   LVGE+G GKSVTS+ +  + ES G
Sbjct: 44  ILKVRNLHVSFPQGHKKSIHIVRGVDLDVHRGEIIGLVGESGSGKSVTSKTLINVNES-G 102

Query: 67  RIVEGQVLYYRDDGSVVDLLKLSEEEI-RKIRGNEIAYIFQDPHASLDPLYTVGYQIAEA 125
            I   Q+          +L  + +++  + IRG +I YI QDP  SL+P  TVG Q+ +A
Sbjct: 103 IISADQIQI-----GEYELTNIKKQKYWQYIRGQKIGYIPQDPLTSLNPTRTVGKQLLDA 157

Query: 126 MEVHG--KIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGISNNP 183
           +  +   K  +  E     + +LK+  +    +    YPH LSGGMKQR+VI + ++  P
Sbjct: 158 LNNNEDWKNSTYTEKKNYLIGLLKTFGLRSAEKIFYAYPHTLSGGMKQRIVITMVVALKP 217

Query: 184 RILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYAGKI 243
            ++IADEPTTALD T+QA +L L   +++K   ++ILI+HN+ V+A+  D + VMYAG+I
Sbjct: 218 ELIIADEPTTALDPTVQASVLALFEDIRQKMGISIILISHNISVIAKFCDYIYVMYAGRI 277

Query: 244 VEIGTVDQIFKNPLHPYTQGLLRAVPNPLTKIEKLEAIPGTVPNLITPPGGCRFHPRCPK 303
           VE GT  +IF NP HPYT  L+ A+P   +K EKL  I GT P++   P G  F  R   
Sbjct: 278 VEKGTKQEIFTNPAHPYTWALISAIPE--SKDEKLYTIQGTPPDMANLPLGDPFVYRNDY 335

Query: 304 VMSICKEKVPELKEIEPGHFVACHL 328
            + I   K P L  I   H  A  L
Sbjct: 336 ALEIDYLKEPPLIPITETHAAATWL 360


>gb|AAK41514.1| Oligo/dipeptide transport, ATP binding protein (dppF-1) [Sulfolobus
           solfataricus]
           Length = 325
           
 Score =  202 bits (508), Expect = 5e-51
 Identities = 118/329 (35%), Positives = 192/329 (57%), Gaps = 24/329 (7%)

Query: 8   ILQVRNLTVHF-----YTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLI 62
           +++V NL V+F     +T   +VKA++ V+  + + E   +VGE+G GK+   R +T  +
Sbjct: 14  VVKVENLKVYFTKGGMFTKKYVVKALDGVTLSIKEREIMGVVGESGSGKTTLGR-VTIGL 72

Query: 63  ESPGRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQI 122
           + P     G V Y + D   +++ K   ++I     N +  I+QDP++S+DP+  V Y +
Sbjct: 73  QKP---TSGNV-YIKADNKEINVNKAKLKDI----SNYVQMIYQDPYSSIDPIMRV-YDV 123

Query: 123 AEAMEVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGISNN 182
                 + K+  I + I++A+      L+  P   + N  ++LSGG +QR+ I   I  N
Sbjct: 124 LATPLKYKKMSDIDKKIEEAMR-----LVDLPLELLENRVYQLSGGQRQRLSIARAIVVN 178

Query: 183 PRILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYAGK 242
           P+ ++ADEPTT LD +++ +IL ++   +E    + + ITH L +    +DR+ V+Y GK
Sbjct: 179 PKYIVADEPTTMLDASLKGEILKIIKDARESKGFSFMYITHELPIAKIISDRIIVLYLGK 238

Query: 243 IVEIGTVDQIFKNPLHPYTQGLLRAVP--NPLTKIEKLEAIPGTVPNLITPPGGCRFHPR 300
           IVE+G  ++I KNPLHPYTQGL+   P  +P  + +K++ I   V +++ P  GC F+PR
Sbjct: 239 IVELGNSNEIIKNPLHPYTQGLIEVYPRIDPSLR-DKIKEIKIKV-DIVRPDKGCVFYPR 296

Query: 301 CPKVMSICKEKVPELKEIEPGHFVACHLY 329
           CP  M  CKE+ PELKE+   H+VAC LY
Sbjct: 297 CPFAMPKCKEQEPELKEVSQNHYVACWLY 325


>gb|AAK41519.1| Oligo/dipeptide transport, ATP binding protein . (dppD-2)
           [Sulfolobus solfataricus]
           Length = 323
           
 Score =  201 bits (507), Expect = 7e-51
 Identities = 117/322 (36%), Positives = 185/322 (57%), Gaps = 11/322 (3%)

Query: 9   LQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIESPGRI 68
           LQVR+L + +    G ++AI +V F + KG++  ++GETG GK+  + AI + +      
Sbjct: 3   LQVRDLNISYKIGKGSIRAINRVYFQLEKGDSLGVIGETGSGKTTIANAIMRALPENAEY 62

Query: 69  VEGQVLYYRDDGSVVDLLKLSEEEIRK-IRGNEIAYIFQDPHASLDPLYTVGYQIAEAME 127
             G + +   D     +LK+ +E  RK IR  +I+ I Q    + +P+  VG Q+ + M 
Sbjct: 63  -SGSIFFNNKD-----ILKMDQETYRKEIRWKKISIIPQYSMNAFNPIKRVGEQLVKIMM 116

Query: 128 VHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGISNNPRILI 187
            +       +  ++   +   + +P    +    P ELSGG +QRVVI   +  +P ++I
Sbjct: 117 ENDSNIDTSKASERIFYLFNQLSLPPEIYK--KLPDELSGGQRQRVVIASALLLDPELVI 174

Query: 188 ADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYAGKIVEIG 247
           ADEPTTALDV  QA+++ L+ +     + T+I ITH++ VVA  A +V  +YAG+I+E G
Sbjct: 175 ADEPTTALDVINQARVISLIKREIVDKQKTLIYITHDIAVVAGVAKKVLTLYAGEIMEFG 234

Query: 248 TVDQIFKNPLHPYTQGLLRAVPN-PLTKIEKLEAIPGTVPNLITPPGGCRFHPRCPKVMS 306
              +IFK PLHPY++GLL +VP+    K++K+  IPG  P+L     GC F PRC     
Sbjct: 235 DSRKIFKEPLHPYSKGLLSSVPDIRFGKVKKVHYIPGDPPDLSKEIKGCPFAPRCSIAKD 294

Query: 307 ICKEKVPELKEIEPGHFVACHL 328
           ICK + P+L+ ++ G +VACHL
Sbjct: 295 ICKVEKPKLRYVD-GRYVACHL 315


>dbj|BAA94703.1| (AB026907) dipeptide transporter DppE homolog [Ochrobactrum
           anthropi]
           Length = 335
           
 Score =  201 bits (505), Expect = 1e-50
 Identities = 119/307 (38%), Positives = 170/307 (54%), Gaps = 20/307 (6%)

Query: 22  AGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIESPGRIVEGQVLYYRDDGS 81
           A  V+A++ VS  V  GET  LVGE+G GKS   RAI  L E     + G + +   DG 
Sbjct: 31  ASAVRAVDGVSLSVQAGETLGLVGESGSGKSTIGRAILGLNEP----LSGTIHF---DGR 83

Query: 82  VVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQIAEAMEVHGKIKSIKEGIQK 141
                  S  ++R+     +  +FQDP++SL+P   +G  I E +  H  +   K+ + +
Sbjct: 84  PTH----SRRDLRR----RMQMVFQDPYSSLNPRLKIGDAIGEVLRFHSIVP--KQDVDR 133

Query: 142 AVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGISNNPRILIADEPTTALDVTIQA 201
            V  L S L+   A      P E+SGG +QR  I   ++  P  L+ DEP  ALDV+IQA
Sbjct: 134 EVRRLLS-LVGLSAAMAERRPREMSGGQRQRAGIARALALRPDFLVLDEPVAALDVSIQA 192

Query: 202 QILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYAGKIVEIGTVDQIFKNPLHPYT 261
           QIL+LL  ++++   T++ I H LGVV   +DR+AV+Y GKI+E+G    +F++  HPYT
Sbjct: 193 QILNLLTDLRQELGLTMLFIAHGLGVVRHMSDRIAVLYLGKIMEVGPAHAVFESSRHPYT 252

Query: 262 QGLLRAVPN-PLTKIEKLEAIPGTVPNLITPPGGCRFHPRCPKVMSICKEKVPELKEIEP 320
           + LL AVP   L K ++     G VP+ +  P GCRF  RCP    ICK + PE+  + P
Sbjct: 253 KALLSAVPEINLVKRQRPPVTQGDVPSPLNVPSGCRFRTRCPVAQDICKTQPPEV-PVGP 311

Query: 321 GHFVACH 327
            HF  CH
Sbjct: 312 DHFSRCH 318


>dbj|BAB04289.1| (AP001509) oligopeptide ABC transporter (ATP-binding protein)
           [Bacillus halodurans]
           Length = 276
           
 Score =  200 bits (504), Expect = 2e-50
 Identities = 106/269 (39%), Positives = 169/269 (62%), Gaps = 6/269 (2%)

Query: 1   MRKVPEPILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQ 60
           M K    +L+VRNL V   +  G++  ++ + F++ +G+   LVGE+G GK++T  +I Q
Sbjct: 1   MIKNDHHVLKVRNLNVKVKSDQGMLPLVQGLQFELKRGKVLGLVGESGSGKTMTCMSILQ 60

Query: 61  LIESPGRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGY 120
           L++     +EG +     +     L  L  E++R IRG EI YI Q+P  +  P++T+G 
Sbjct: 61  LLDRKTTCIEGSIQLQGRE-----LNGLKAEDMRTIRGREIGYIMQNPMNAFSPVFTIGN 115

Query: 121 QIAEAMEVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGIS 180
           Q  E +  H ++   ++  + AV  +++V +P P+  +  YP +LSGGM QRV+I I + 
Sbjct: 116 QFIETIRTHTELTK-RQAFELAVASMETVHLPKPSELMRRYPFQLSGGMLQRVMIAISMC 174

Query: 181 NNPRILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYA 240
             P ++IADEPTTALDVT Q Q+L  L++++ +  + ++LI+H+LGV+AE AD VAVM+ 
Sbjct: 175 LRPSVVIADEPTTALDVTNQLQVLKELDRLRLESDSAILLISHDLGVIAELADEVAVMHK 234

Query: 241 GKIVEIGTVDQIFKNPLHPYTQGLLRAVP 269
           G+IVE   V Q+F +P H YT+ LL+A P
Sbjct: 235 GRIVEKADVFQLFDHPQHEYTKKLLQARP 263


>sp|P33916|YEJF_ECOLI HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PROTEIN YEJF
           >gi|7445954|pir||C64987 probable oligopeptide transport
           protein yejF - Escherichia coli
           >gi|405909|gb|AAA16379.1| (U00008) yejF [Escherichia
           coli] >gi|1788506|gb|AAC75241.1| (AE000307) putative
           ATP-binding component of a transport system [Escherichia
           coli K12]
           Length = 529
           
 Score =  199 bits (502), Expect = 3e-50
 Identities = 110/267 (41%), Positives = 167/267 (62%), Gaps = 9/267 (3%)

Query: 6   EPILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIESP 65
           + +L + NL+V F     +   +  VS  +  GET ALVGE+G GKSVT+ +I +L+ SP
Sbjct: 3   QTLLAIENLSVGFRHQQTVRTVVNDVSLQIEAGETLALVGESGSGKSVTALSILRLLPSP 62

Query: 66  G-RIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQIAE 124
               + G + ++ +      LL  S++ +R +RGN+IA IFQ+P  SL+PL+T+  Q+ E
Sbjct: 63  PVEYLSGDIRFHGES-----LLHASDQTLRGVRGNKIAMIFQEPMVSLNPLHTLEKQLYE 117

Query: 125 AMEVH-GKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGISNNP 183
            + +H G  +    G  + ++ L  V I   A+R+ +YPH+LSGG +QRV+I + +   P
Sbjct: 118 VLSLHRGMRREAARG--EILNCLDRVGIRQAAKRLTDYPHQLSGGERQRVMIAMALLTRP 175

Query: 184 RILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYAGKI 243
            +LIADEPTTALDV++QAQIL LL +++ +    ++ ITHNL +V + A RVAVM  G+ 
Sbjct: 176 ELLIADEPTTALDVSVQAQILQLLRELQGELNMGMLFITHNLSIVRKLAHRVAVMQNGRC 235

Query: 244 VEIGTVDQIFKNPLHPYTQGLLRAVPN 270
           VE      +F +P HPYTQ LL + P+
Sbjct: 236 VEQNYAATLFASPTHPYTQKLLNSEPS 262


 Score =  153 bits (383), Expect = 2e-36
 Identities = 99/273 (36%), Positives = 150/273 (54%), Gaps = 25/273 (9%)

Query: 4   VPEP---ILQVRNLTVHFYTYAGIVKAI-------EKVSFDVYKGETFALVGETGCGKSV 53
           +PEP   +L V  L V F    GI+K I       + +SF +  GET  LVGE+G GKS 
Sbjct: 268 LPEPASTLLDVEQLQVAFPIRKGILKRIVDHNVVVKNISFTLRAGETLGLVGESGSGKST 327

Query: 54  TSRAITQLIESPGRIV-EGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASL 112
           T  A+ +LI S G I+ +GQ L             L+  ++  IR + I  +FQDP++SL
Sbjct: 328 TGLALLRLINSQGSIIFDGQPLQ-----------NLNRRQLLPIR-HRIQVVFQDPNSSL 375

Query: 113 DPLYTVGYQIAEAMEVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQR 172
           +P   V   I E + VH    S  +  Q+ + ++  V + DP  R + YP E SGG +QR
Sbjct: 376 NPRLNVLQIIEEGLRVHQPTLSAAQREQQVIAVMHEVGL-DPETR-HRYPAEFSGGQRQR 433

Query: 173 VVIGIGISNNPRILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETA 232
           + I   +   P ++I DEPT++LD T+QAQIL LL  +++K++   + I+H+L VV    
Sbjct: 434 IAIARALILKPSLIILDEPTSSLDKTVQAQILTLLKSLQQKHQLAYLFISHDLHVVRALC 493

Query: 233 DRVAVMYAGKIVEIGTVDQIFKNPLHPYTQGLL 265
            +V ++  G++VE G   ++F  P   YT+ LL
Sbjct: 494 HQVIILRQGEVVEQGPCARVFATPQQEYTRQLL 526


>dbj|BAA15988.1| (D90849) Oligopeptide transport ATP-binding protein OppD.
           [Escherichia coli]
           Length = 370
           
 Score =  199 bits (502), Expect = 3e-50
 Identities = 110/267 (41%), Positives = 167/267 (62%), Gaps = 9/267 (3%)

Query: 6   EPILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIESP 65
           + +L + NL+V F     +   +  VS  +  GET ALVGE+G GKSVT+ +I +L+ SP
Sbjct: 3   QTLLAIENLSVGFRHQQTVRTVVNDVSLQIEAGETLALVGESGSGKSVTALSILRLLPSP 62

Query: 66  G-RIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQIAE 124
               + G + ++ +      LL  S++ +R +RGN+IA IFQ+P  SL+PL+T+  Q+ E
Sbjct: 63  PVEYLSGDIRFHGES-----LLHASDQTLRGVRGNKIAMIFQEPMVSLNPLHTLEKQLYE 117

Query: 125 AMEVH-GKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGISNNP 183
            + +H G  +    G  + ++ L  V I   A+R+ +YPH+LSGG +QRV+I + +   P
Sbjct: 118 VLSLHRGMRREAARG--EILNCLDRVGIRQAAKRLTDYPHQLSGGERQRVMIAMALLTRP 175

Query: 184 RILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYAGKI 243
            +LIADEPTTALDV++QAQIL LL +++ +    ++ ITHNL +V + A RVAVM  G+ 
Sbjct: 176 ELLIADEPTTALDVSVQAQILQLLRELQGELNMGMLFITHNLSIVRKLAHRVAVMQNGRC 235

Query: 244 VEIGTVDQIFKNPLHPYTQGLLRAVPN 270
           VE      +F +P HPYTQ LL + P+
Sbjct: 236 VEQNYAATLFASPTHPYTQKLLNSEPS 262


>pir||D75142 oligopeptide transport ATP-binding protein appf PAB0631 -
           Pyrococcus abyssi (strain Orsay)
           >gi|5458364|emb|CAB49853.1| (AJ248285) OLIGOPEPTIDE
           TRANSPORT ATP-BINDING PROTEIN APPF [Pyrococcus abyssi]
           Length = 322
           
 Score =  198 bits (498), Expect = 8e-50
 Identities = 117/330 (35%), Positives = 190/330 (57%), Gaps = 23/330 (6%)

Query: 8   ILQVRNLTVHFYTYAGI-----VKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLI 62
           +L+V+NLT  F +  G+     V+A++ VSF + +GE  +LVGE+G GK+   + I +L+
Sbjct: 2   LLEVQNLTKIFTS--GLIGGYQVRAVDGVSFTINEGEIVSLVGESGSGKTTIGKLILRLL 59

Query: 63  ESPGRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVG--- 119
                   G++L+   +G   D++K S++E++     ++  +FQDP AS +PL+ V    
Sbjct: 60  TP----TSGRILF---EGK--DIMKFSKKELKTYYYRKVQAVFQDPFASFNPLHQVDKVF 110

Query: 120 YQIAEAMEVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGI 179
           + I ++       +  +E I KA++ +      +P+     YPH+LSGG  QR++I   +
Sbjct: 111 HMIFDSYFPDLGREEREEMIDKALEEVGL----NPSEVRGKYPHQLSGGQLQRILIARAL 166

Query: 180 SNNPRILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMY 239
              PR+LIADE  + LD + +  +L+LL + ++KY  +V+ ITH+L +    +D   +MY
Sbjct: 167 LLKPRLLIADEAVSMLDASTRIDVLNLLGEFRDKYGTSVLFITHDLALGYYISDSTIIMY 226

Query: 240 AGKIVEIGTVDQIFKNPLHPYTQGLLRAVPNPLTKIEKLEAIPGTVPNLITPPGGCRFHP 299
            G IVE+G  +++F NPLHPYT+ LL +VP+   K E     P      +    GCR+ P
Sbjct: 227 RGTIVEMGETEKVFHNPLHPYTKMLLESVPDLNVKWEFKGIEPEKEEGKVWKIKGCRYAP 286

Query: 300 RCPKVMSICKEKVPELKEIEPGHFVACHLY 329
           RCPK   +C +  P L E+E  H+VACHLY
Sbjct: 287 RCPKAKDVCFKIRPTLIEVEKNHWVACHLY 316


>pir||D82301 peptide ABC transporter, ATP-binding protein VC0616 [imported] -
           Vibrio cholerae (group O1 strain N16961)
           >gi|9655049|gb|AAF93782.1| (AE004147) peptide ABC
           transporter, ATP-binding protein [Vibrio cholerae]
           Length = 331
           
 Score =  197 bits (495), Expect = 2e-49
 Identities = 108/309 (34%), Positives = 179/309 (56%), Gaps = 12/309 (3%)

Query: 24  IVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIESPGRIVEGQVLYYRDDGSVV 83
           +++AI  VSF +YK    ++VGE+G GKS T++ I ++      ++E +    +D  S  
Sbjct: 30  MMRAINDVSFKMYKSRGLSVVGESGSGKSTTAKMIAKMYAPTSGVIEYKGRDIQDIVSRD 89

Query: 84  DLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQIAEAMEVHGKIK--SIKEGIQK 141
           DL+   E          +  ++QDP  SL+P +T+ + IA  + +H K+   + KE  ++
Sbjct: 90  DLMHYREG---------VQMVWQDPFGSLNPTHTIFHHIARPLLIHKKVTPGNKKELEER 140

Query: 142 AVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGISNNPRILIADEPTTALDVTIQA 201
             ++L+ V +  P      YPH+LSGG +QRV +   I+    +++ADEPT+ LDV+I+A
Sbjct: 141 VYELLEQVGLIPPKATAAKYPHQLSGGQRQRVNLARNIAVGAEVVLADEPTSMLDVSIRA 200

Query: 202 QILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYAGKIVEIGTVDQIFKNPLHPYT 261
            +L+L+ +MK + + +++ ITH++      A+ +AVMY G +VE G  D+I  +P HPYT
Sbjct: 201 GVLNLMEEMKFERQMSLLYITHDIATARYIAEDLAVMYVGHMVEWGDTDEIIHDPQHPYT 260

Query: 262 QGLLRAVPNPLTKI-EKLEAIPGTVPNLITPPGGCRFHPRCPKVMSICKEKVPELKEIEP 320
           + L+ AVP+P   I EKLE   G +P       GC F  RC    + C+E +PE+ ++  
Sbjct: 261 KLLVSAVPDPKKSIHEKLEGNKGEIPLWTPNSVGCPFAGRCLYASAKCREALPEVTQLSD 320

Query: 321 GHFVACHLY 329
            HFV C+L+
Sbjct: 321 NHFVRCYLF 329


>gb|AAF73094.1|AF103793_5 (AF103793) ATPase OppF [Listeria monocytogenes]
           Length = 325
           
 Score =  195 bits (491), Expect = 5e-49
 Identities = 120/330 (36%), Positives = 185/330 (55%), Gaps = 31/330 (9%)

Query: 1   MRKVPEPILQVRNLTVHFYT-YAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAIT 59
           M +  E +L++ NL  +F    A  V+A++ +SFD+YKGET  LVGE+GCGKS T R I 
Sbjct: 1   MTEQREKLLEIHNLKQYFNKGTASEVRAVDDISFDIYKGETLGLVGESGCGKSTTGRTII 60

Query: 60  QLIESPGRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVG 119
           +L ++ G    G+V+Y   +G  V   K S +E+ + R  ++  IFQDP+ASL+P   V 
Sbjct: 61  RLYDATG----GEVIY---NGKDVHARK-SRKEMLEFR-RKMQMIFQDPYASLNPRVKVK 111

Query: 120 YQIAEAMEVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGI 179
             IAE + +HG  K+ +E  ++  D+L++V +         YPHE SGG +QR+      
Sbjct: 112 DIIAEGIRIHGLAKTPEETNKQVYDLLETVGLSK--EHAGRYPHEFSGGQRQRIGYRSCA 169

Query: 180 SNNPRILIADEPTTALD---VTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVA 236
             +P  +IADEP +ALD   V+IQAQ+++LL +++++   T + I H+L +V   +DR+ 
Sbjct: 170 CCSPEFIIADEPISALDFLDVSIQAQVVNLLRQLQKEKNLTYLFIAHDLSMVKYISDRIG 229

Query: 237 VMYAGKIVEIGTVDQIFKNPLHPYTQGLLRAVPNPLTKIEKLEAIPGTVPNLITPPGGCR 296
           VMY GK+V++   + ++  PLHPYT+ LL A+P P    E+        P       G  
Sbjct: 230 VMYFGKLVKLAFANDLYHAPLHPYTESLLSAIPLPDPNYERTRVRKTYDPTSHNYKDGDE 289

Query: 297 FHPRCPKVMSICKEKVPELKEIEPGHFVAC 326
                            +++EI PGHFV C
Sbjct: 290 I----------------KMREIAPGHFVYC 303


>pir||F71163 probable oligopeptide transport ATP-binding protein AppF -
           Pyrococcus horikoshii >gi|3256912|dbj|BAA29595.1|
           (AP000002) 321aa long hypothetical oligopeptide
           transport ATP-binding protein AppF [Pyrococcus
           horikoshii]
           Length = 321
           
 Score =  192 bits (484), Expect = 4e-48
 Identities = 109/307 (35%), Positives = 174/307 (56%), Gaps = 14/307 (4%)

Query: 25  VKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIESPGRIVEGQVLYYRDDGSVVD 84
           V+A++ VSF+V +GE  +L+GE+G GK+   + I +L++       G++L+  +D     
Sbjct: 24  VRAVDDVSFEVGEGEIVSLIGESGSGKTTIGKLILRLLKP----TSGRILFRGED----- 74

Query: 85  LLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVG--YQIAEAMEVHGKIKSIKEGIQKA 142
           +     E++R+     +  +FQDP AS +PL+ V   + +     + G     +E + K 
Sbjct: 75  IWSFDREKLRRYYYKNVQAVFQDPFASFNPLHKVDRVFDLVFRNFLRGVAPGEREELIKR 134

Query: 143 VDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGISNNPRILIADEPTTALDVTIQAQ 202
              L+SV + +P   +  YPH+LSGG  QR++I   +   P +LIADE  + LD + +  
Sbjct: 135 S--LESVGL-NPGEVLGKYPHQLSGGQLQRILIARALLVEPSLLIADEAVSMLDASTRID 191

Query: 203 ILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYAGKIVEIGTVDQIFKNPLHPYTQ 262
           IL+LL + ++K+  +VI ITH+L +    +D++ +MY G+IVE G  +++F NPLHPYT+
Sbjct: 192 ILNLLGEFRDKFGTSVIFITHDLALGYYISDKIVIMYRGRIVEWGDAERVFGNPLHPYTR 251

Query: 263 GLLRAVPNPLTKIEKLEAIPGTVPNLITPPGGCRFHPRCPKVMSICKEKVPELKEIEPGH 322
            LL +VP+   + E     P      +    GCRF PRCP     C EK P+  EIE  H
Sbjct: 252 MLLESVPDLSVRWEFKGIEPEREEERVYEIKGCRFAPRCPYARKECYEKPPQTIEIEKNH 311

Query: 323 FVACHLY 329
            VAC+LY
Sbjct: 312 HVACYLY 318


>pir||T35983 probable peptide transport ATP-binding protein - Streptomyces
           coelicolor >gi|4464268|emb|CAB37471.1| (AL035559)
           putative peptide transport ATP-binding protein
           [Streptomyces coelicolor A3(2)]
           Length = 359
           
 Score =  192 bits (484), Expect = 4e-48
 Identities = 122/334 (36%), Positives = 181/334 (53%), Gaps = 31/334 (9%)

Query: 7   PILQVRNLTVHFYTYAGIV--KAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIES 64
           P+L VR L V F    G    +A++ V  D+ +GE  ALVGE+GCGK+  +R++  L+  
Sbjct: 31  PLLSVRGLHVTFPGRRGAAAARAVDGVDLDIRRGEIVALVGESGCGKTTLARSLLGLVRP 90

Query: 65  PGRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQIAE 124
            G    G+V +   DG+    L  S   ++  R      + QDP  SL+P +TV   +AE
Sbjct: 91  TG----GRVTF---DGAP---LGYSARALKAYR-RRAQLVLQDPSGSLNPRHTVYDIVAE 139

Query: 125 AMEVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGISNNPR 184
            + +HG     +  + +A+   ++ L P P R    YPHELSGG +QRVVI   +   P 
Sbjct: 140 GLRIHGHAGDERTAVAEALS--RAGLRP-PERFFLRYPHELSGGQRQRVVIAGALVLQPE 196

Query: 185 ILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYAGKIV 244
           +L+ADEP  +LD +++ +IL LL +++ +   + +++TH+LG+    ADRVAVMY G+IV
Sbjct: 197 LLVADEPVASLDASVRGEILALLLRLRTELGLSALVVTHDLGLAWNIADRVAVMYLGRIV 256

Query: 245 EIGTVDQIFKNPLHPYTQGLLRAVPN-PLTKIEKLEAIPGTVPNLITPPGGCRFHPRCPK 303
           E G V+Q+   P HPYTQ LL  +P  P   +     + G  P+    PGGCRFH RCP 
Sbjct: 257 ETGAVEQVLTAPRHPYTQALLSVLPEAPGAPV----VLTGEPPDPSYIPGGCRFHVRCPV 312

Query: 304 VMS----------ICKEKVPELKEIEPGHFVACH 327
           + S           C+ +  E+        VACH
Sbjct: 313 LASGEAVRAGVADACRNEELEILRGGDESQVACH 346


>pir||B83389 probable ATP-binding component of ABC transporter PA2061 [imported]
           - Pseudomonas aeruginosa (strain PAO1)
           >gi|9948069|gb|AAG05449.1|AE004632_8 (AE004632) probable
           ATP-binding component of ABC transporter [Pseudomonas
           aeruginosa]
           Length = 536
           
 Score =  192 bits (482), Expect = 6e-48
 Identities = 103/267 (38%), Positives = 167/267 (61%), Gaps = 11/267 (4%)

Query: 8   ILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIESPGR 67
           +L+V NL+V +    G  + ++ + F +  GET ALVGE+G GKS T+ A+ +L+    R
Sbjct: 5   LLRVENLSVAY----GDTQVVKGIDFSLRAGETLALVGESGSGKSQTAHALLRLLPGAAR 60

Query: 68  IVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQIAEAME 127
           +  G V   R DG   +LL LS + +  IRG  I  +FQ+P  SL+PL  +G Q+ E + 
Sbjct: 61  L-GGSV---RLDGE--ELLALSPQALLAIRGQRIGMVFQEPMTSLNPLQRIGRQVGEGLR 114

Query: 128 VHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGISNNPRILI 187
           +H +++       + +++L+   +  P R +  YPH+LSGG +QRV++ + ++  P++LI
Sbjct: 115 LHRRLRGAALR-GRVLELLELAGLEQPRRLLEAYPHQLSGGQRQRVMLAMALACEPQLLI 173

Query: 188 ADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYAGKIVEIG 247
           ADEPTTALDVT+Q ++L+LL  ++ +    ++LI+H+L +V   ADRV VM  G+IVE  
Sbjct: 174 ADEPTTALDVTVQKRLLELLQSLQRRLGMAILLISHDLNLVRRVADRVCVMRDGQIVEEN 233

Query: 248 TVDQIFKNPLHPYTQGLLRAVPNPLTK 274
             + +F++P HPYT+ L+ A P  L +
Sbjct: 234 ACETLFRSPRHPYTRLLIEAEPGGLAE 260


 Score =  151 bits (377), Expect = 1e-35
 Identities = 87/270 (32%), Positives = 155/270 (57%), Gaps = 20/270 (7%)

Query: 6   EPILQVRNLTVHFYTYAGIVK------AIEKVSFDVYKGETFALVGETGCGKSVTSRAIT 59
           E  L+VR L++ +    G ++      A+ +VS  + +G T  +VGE+G GKS   +A+ 
Sbjct: 266 ETCLEVRALSLDYPAPGGWLRRRAGLRAVHEVSLRLRRGSTLGIVGESGSGKSSLGQALL 325

Query: 60  QLIESPGRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVG 119
           +L+ +     EGQ+L+    G  +D  +L  + +  +R  +   +FQDP+ SL+P  +V 
Sbjct: 326 RLLPA-----EGQILF---QGERLD--RLHGKRLLPLR-RQFQAVFQDPYGSLNPRLSVE 374

Query: 120 YQIAEAMEVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGI 179
             + E + +HG I    E   + ++ L+ V + +P   +  YPHE SGG +QR+ I   +
Sbjct: 375 QIVGEGLRIHG-IGDAGERRARVLEALREVGLDEPC--LERYPHEFSGGQRQRIAIARTL 431

Query: 180 SNNPRILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMY 239
              P +++ DEPT+ALD ++Q Q+++LL +++ ++  + + I+H+L VV   A  + V+ 
Sbjct: 432 VLKPALILLDEPTSALDRSVQCQVVELLRRLQRRHGLSYLFISHDLAVVRALAHDILVLK 491

Query: 240 AGKIVEIGTVDQIFKNPLHPYTQGLLRAVP 269
            G++VE G+   +F  P HPYT+ LL A+P
Sbjct: 492 DGRVVEQGSAAALFSQPRHPYTRELLGAIP 521


>gb|AAG20448.1| (AE005117) oligopeptide ABC transporter ATP-binding; YkfD
           [Halobacterium sp. NRC-1]
           Length = 445
           
 Score =  191 bits (480), Expect = 1e-47
 Identities = 110/302 (36%), Positives = 179/302 (58%), Gaps = 18/302 (5%)

Query: 6   EPILQVRNLTVHFYT---YAGI-VKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQL 61
           +P+++V +L  H+     ++G  VKA++ V+F++ +GET  LVGE+G GK+   R + QL
Sbjct: 17  QPLVEVTDLKKHYGDGGRFSGPPVKAVDGVNFEIQEGETLGLVGESGSGKTTLGRTLIQL 76

Query: 62  IESPGRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQ 121
             +     EG V +   DG   D+ KL+  ++++ R N    +FQDP +SL+   T+G  
Sbjct: 77  ETA----TEGTVSF---DGR--DITKLTGSDLKQWRKNA-QIVFQDPDSSLNDRMTIGEI 126

Query: 122 IAEAMEVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGISN 181
           + E ++ H    S  E   +  ++L SV +   A     YPH+ SGG +QR+ I   ++ 
Sbjct: 127 VREPLDAHDW-NSPAERRDRVKELLSSVGLQ--ADHYYRYPHQFSGGQRQRIGIARALAL 183

Query: 182 NPRILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYAG 241
            P  ++ DEP +ALD ++QA+IL+LL  +++++  T + I H+L VV    DRVAVMY G
Sbjct: 184 EPEFMVLDEPVSALDASVQAKILNLLEDLQDEFGLTYLFIAHDLSVVRHICDRVAVMYLG 243

Query: 242 KIVEIGTVDQIFKNPLHPYTQGLLRAVPNPLTKIEKLE-AIPGTVPNLITPPGGCRFHPR 300
           KI+EIG  ++++ +  +PYT+ LL A+P P   I++    +PG  P+   PP GC+F  R
Sbjct: 244 KIMEIGETEELYADAKNPYTRSLLSAIPRPDPTIDRNRITLPGAPPSPRNPPAGCQFSTR 303

Query: 301 CP 302
           CP
Sbjct: 304 CP 305


>sp|P45288|SAPD_HAEIN PEPTIDE TRANSPORT SYSTEM ATP-BINDING PROTEIN SAPD
           >gi|1075118|pir||D64134 peptide transport system
           ATP-binding protein HI1641 - Haemophilus influenzae
           (strain Rd KW20) >gi|1574489|gb|AAC23288.1| (U32837)
           peptide ABC transporter, ATP-binding protein (sapD)
           [Haemophilus influenzae Rd]
           Length = 349
           
 Score =  189 bits (475), Expect = 4e-47
 Identities = 113/327 (34%), Positives = 182/327 (55%), Gaps = 14/327 (4%)

Query: 8   ILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIESPGR 67
           +L + NL +   T  G +K ++ V+  + +GE   LVGE+G GKS+ ++ I   I+    
Sbjct: 3   LLDICNLNIEIQTSNGRIKIVDGVNLSLNEGEISGLVGESGSGKSLIAKVICNAIKENWI 62

Query: 68  IVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQIAEAME 127
           I   +  ++      V+LLKLS  + RK+ G EI+ IFQ+P + LDP   +G Q+ + + 
Sbjct: 63  ITADRFRFHD-----VELLKLSPNKRRKLVGKEISMIFQNPLSCLDPSRKIGKQLIQNIP 117

Query: 128 ----VHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGISNNP 183
                +   K      ++A+++L  V I D    + +YP+EL+ G  Q+V+I + ++N P
Sbjct: 118 NWTFKNKWWKWFGWKKRRAIELLHRVGIKDHRDIMASYPNELTEGEGQKVMIAMAVANQP 177

Query: 184 RILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYAGKI 243
           R+LIADEPT AL+ T   Q+  LL+ M +    T++L ++++  ++E  D+++V+Y G+ 
Sbjct: 178 RLLIADEPTNALESTTALQVFRLLSSMNQNQGTTILLTSNDIKSISEWCDQISVLYCGQN 237

Query: 244 VEIGTVDQIFKNPLHPYTQGLLRAVPN---PLTKIEKLEAIPGTVPNLITPPGGCRFHPR 300
            E    + + ++P HPYTQ L+ AVP+   PL    KL  + GT P L   P GCR  PR
Sbjct: 238 TESAPTEILIESPHHPYTQALINAVPDFTQPLGFKTKLGTLEGTAPILEQMPIGCRLGPR 297

Query: 301 CPKVMSICKEKVPELKEIEPGHFVACH 327
           CP     C EK   LK  +  H  +CH
Sbjct: 298 CPFAQKKCMEKPRRLKIKQ--HEFSCH 322


>pir||F70141 probable oligopeptide transport ATP-binding protein oppF - Lyme
           disease spirochete >gi|2281463|gb|AAC46288.1| (AF000366)
           oligopeptide permease homolog F [Borrelia burgdorferi]
           >gi|2688242|gb|AAC66721.1| (AE001140) oligopeptide ABC
           transporter, ATP-binding protein (oppF) [Borrelia
           burgdorferi]
           Length = 323
           
 Score =  187 bits (469), Expect = 2e-46
 Identities = 117/343 (34%), Positives = 196/343 (57%), Gaps = 39/343 (11%)

Query: 1   MRKVPEPILQVRNLTVHFYTYAGI--------VKAIEKVSFDVYKGETFALVGETGCGKS 52
           M    E IL+V NL   F T            V A+  VSF+V K +T  LVGE+GCGKS
Sbjct: 1   MSSKKEIILKVENLMQTFTTGEDFLFWKNKQKVNAVNNVSFEVEKNKTLGLVGESGCGKS 60

Query: 53  VTSRAITQLIESPGRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASL 112
            T R+I QL         G + +     +  ++ KLS++E+ K +  ++  +FQDPH SL
Sbjct: 61  TTLRSIMQLYTP----TSGNIYF-----NGKNITKLSKKELLKTK-KDMQMVFQDPHTSL 110

Query: 113 DPLYTVGYQIAEAMEVHGKIKSI---KEGIQKAVDILKSVLIPDPARRVNNYPHELSGGM 169
           DP  T+   IAE +E++ + K +   K+ I++ V+ L  ++    +  +  YPHE SGG 
Sbjct: 111 DPRMTIKEIIAEPLEIYNENKILPKTKQEIEQRVNELTDIVGLHKSM-LTRYPHEFSGGQ 169

Query: 170 KQRVVIGIGISNNPRILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVA 229
           +QR+ I   ++ NP++L+ DE  +ALDV+I+AQIL+LL  +++++  + + I+H+L VV 
Sbjct: 170 RQRIGIARALALNPKLLLLDEAVSALDVSIRAQILNLLKALQKEFNLSYLFISHDLAVVK 229

Query: 230 ETADRVAVMYAGKIVEIGTVDQIFKNPLHPYTQGLLRAVP--NP-LTKIEKLEAIPGTVP 286
             +D++AVMY G I+E+   + +F NP+HPYT+ L+ ++P  NP   K + ++    T+ 
Sbjct: 230 YMSDKIAVMYLGVILELAPRETLFSNPIHPYTKMLIASIPEINPEKRKNKNIKLDEQTLA 289

Query: 287 NLITPPGGCRFHPRCPKVMSICKEKVPELKEIEPGHFVACHLY 329
           N+              + + +  +  P+L+E+E  HFV+ +L+
Sbjct: 290 NI--------------RKIHLSTQVHPKLEEVEKDHFVSKYLF 318


>pir||E71545 probable oligopeptide transport ATPase - Chlamydia trachomatis
           (serotype D, strain UW3/Cx) >gi|3328607|gb|AAC67793.1|
           (AE001293) Oligopeptide Transport ATPase [Chlamydia
           trachomatis]
           Length = 277
           
 Score =  187 bits (469), Expect = 2e-46
 Identities = 104/264 (39%), Positives = 160/264 (60%), Gaps = 8/264 (3%)

Query: 6   EPILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIESP 65
           E +L++ NL V         + +  +S  + + ++ ALVGE G GK+  S+A+   +   
Sbjct: 3   EDLLKIDNLVVSVKD--SNQRLVNHLSLTIKRCQSMALVGENGSGKTTVSKAVLGFLPDN 60

Query: 66  GRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQIAEA 125
             I  G++LY     S  D+ +LS  +++ IRG +IA IFQ+   +L P   VG QI E 
Sbjct: 61  CYIQSGRILY-----SSTDITRLSRRQLQTIRGKKIATIFQNAMGTLTPSMRVGAQIVET 115

Query: 126 MEVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGISNNPRI 185
           +  H  + S +E   KA ++L+SV I  P R +  YP ELSGGM QRV I I ++ NP +
Sbjct: 116 LRHHFDM-SKEEAFSKARELLESVHIESPDRCLQLYPFELSGGMCQRVSIAIALATNPEL 174

Query: 186 LIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYAGKIVE 245
           +IADEP+TALD   QAQ+L +L ++ + +   ++LITHNL +V+E  + +A++  G+IVE
Sbjct: 175 IIADEPSTALDSISQAQVLRVLTQIHQNHSTALLLITHNLALVSELCEEMAIIRYGEIVE 234

Query: 246 IGTVDQIFKNPLHPYTQGLLRAVP 269
            G V ++  +P HPYTQ L+RA+P
Sbjct: 235 QGPVQELLHSPSHPYTQQLIRAIP 258


>emb|CAC11411.1| (AL445063) oligopeptide transport ATP-binding protein appF related
           protein [Thermoplasma acidophilum]
           Length = 314
           
 Score =  187 bits (469), Expect = 2e-46
 Identities = 118/305 (38%), Positives = 172/305 (55%), Gaps = 24/305 (7%)

Query: 25  VKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIESPGRIVEGQVLYYRDDGSVVD 84
           V+A++ VS  +  G    +VGE+G GKS   + +  L E+P    +G+ LY++       
Sbjct: 33  VRALDDVSISIMDGNVIGVVGESGSGKSTMGKVMVTL-ETP---TDGE-LYFKGT----- 82

Query: 85  LLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQIAEAMEVHGKIKSIKEGIQKAVD 144
             ++++ E  KIR  ++  +FQ+P  SL+P   V   ++E +          EG  K V 
Sbjct: 83  --RVTKSEYPKIR-KQVDMVFQNPATSLNPKMKVKDIVSEPLG------HFDEGAIKEV- 132

Query: 145 ILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGISNNPRILIADEPTTALDVTIQAQIL 204
           ILK  L  D  +  +    ELSGG  QRV I   +   P +L+ DEPT+ALD +IQAQ+L
Sbjct: 133 ILKVGLSYDEVK--DKQSRELSGGQVQRVAIARALMKKPELLVLDEPTSALDESIQAQVL 190

Query: 205 DLLNKMKEKYKATVILITHNLGVVAETADRVAVMYAGKIVEIGTVDQIFKNPLHPYTQGL 264
           +LL  ++ +YK T I ITHN+ V    +D + V+YAGKIVE G   ++   PLHPYTQ L
Sbjct: 191 NLLVDLQTEYKMTYIFITHNILVAKYISDYIVVLYAGKIVEYGPTSEVLSKPLHPYTQLL 250

Query: 265 LRAVPNPLTKIEKLEAIPGTVPNLITPPGGCRFHPRCPKVMSICKEKVPELKEIEPGHFV 324
           L +VP     ++ ++   G VP+LI  P GCRF+PRCP VM  C+++ P L      + V
Sbjct: 251 LSSVPT--VDVKDVKPPVGDVPSLINLPQGCRFNPRCPFVMEKCRKEEPPLISQGQNYQV 308

Query: 325 ACHLY 329
           AC LY
Sbjct: 309 ACWLY 313


>emb|CAC12446.1| (AL445067) probable oligopeptide ABC transport system, ATP-binding
           protein appD [Thermoplasma acidophilum]
           Length = 298
           
 Score =  186 bits (468), Expect = 3e-46
 Identities = 112/303 (36%), Positives = 174/303 (56%), Gaps = 25/303 (8%)

Query: 35  VYKGETFALVGETGCGKSVTSRAITQLIESPGRIVEGQVLYYRDDGSVVDLLKLSEEEIR 94
           V KG    + GE+G GKS  ++AI + ++ PG I  GQV  Y DD    D+L+++ E++R
Sbjct: 5   VRKGIILGIAGESGSGKSTLAQAIYRSLKYPGEITSGQV--YLDDQ---DILRINGEDLR 59

Query: 95  KIRGNEIAYIFQDPHASLDPLYTVGYQIAEAMEVHG-KIKSIKEGIQKAVDILKSVLIPD 153
           +IR    ++I Q    +L+P+  + YQ  + +  HG + +  ++ IQ A+ +++      
Sbjct: 60  RIRATRFSFIPQAAMNALNPVKRIRYQFYDLLIAHGLQPEKNEDRIQAAIKMVRL----- 114

Query: 154 PARRVNNYPHELSGGMKQRVVIGIGISNNPRILIADEPTTALDVTIQAQILDLLNKMKEK 213
               + ++PHELSGGM+QRVVI + +   P ++I DEPTT LDV +Q +IL  L  ++ +
Sbjct: 115 RENVLESFPHELSGGMRQRVVIAMSLLLRPDLVILDEPTTGLDVLVQHEILKDLKAIQRQ 174

Query: 214 YKATVILITHNLGVVAETADRVAVMYAGKIVEIGTVDQIFKNPLHPYTQGLLRAVPNPLT 273
              T+I ITH+L ++ E AD +A++YAG+IVE G  D++  +P HPY   LLR++P    
Sbjct: 175 SGLTMIFITHDLSILYEIADEIAMIYAGEIVEFGPRDEMLNDPQHPYNFLLLRSMP---- 230

Query: 274 KIEKLEAIPGTVPNLITPPG-------GCRFHPRCPKVMSICKEKVPELKEIEPGHFVAC 326
              ++ A  GT   LI  PG       GC+F+ RCP  +  C  K PEL   +  HF  C
Sbjct: 231 ---RIGAKRGTGYRLIGNPGNFREDFNGCQFYTRCPFSVPQCVSKHPELTSDDGRHFRRC 287

Query: 327 HLY 329
             Y
Sbjct: 288 LRY 290


>sp|P18766|AMIF_STRPN OLIGOPEPTIDE TRANSPORT ATP-BINDING PROTEIN AMIF
           >gi|98019|pir||S11153 oligopeptide transport protein
           amiF - Streptococcus pneumoniae
           >gi|47347|emb|CAA35217.1| (X17337) AmiF protein
           [Streptococcus pneumoniae]
           Length = 308
           
 Score =  185 bits (466), Expect = 5e-46
 Identities = 115/322 (35%), Positives = 177/322 (54%), Gaps = 34/322 (10%)

Query: 6   EPILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIESP 65
           E ++++++L + F   +    A++  +F + KGETF+LVGE+G GK+   RAI  L ++ 
Sbjct: 3   EKLVEIKDLEISFGEGSKKFVAVKNANFFINKGETFSLVGESGSGKTTIGRAIIGLNDTS 62

Query: 66  GRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQIAEA 125
                G +++   DG  ++  K  E+    IR   I  IFQDP ASL+   TV Y I+E 
Sbjct: 63  N----GDIIF---DGQKINGKKSREQAAELIR--RIQMIFQDPAASLNERATVDYIISEG 113

Query: 126 MEVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGISNNPRI 185
           +  H   K  +E  +K   I++ V +   A  +  YPHE SGG +QR+ I   +   P  
Sbjct: 114 LYNHRLFKDEEERKEKVQSIIREVGLL--AEHLTRYPHEFSGGQRQRIGIARALVMQPDF 171

Query: 186 LIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYAGKIVE 245
           +IADEP +ALDV+++AQ+L+LL K +++   T + I H+L VV   +DR+AV+Y G IVE
Sbjct: 172 VIADEPISALDVSVRAQVLNLLKKFQKELGLTYLFIAHDLSVVRFISDRIAVIYKGVIVE 231

Query: 246 IGTVDQIFKNPLHPYTQGLLRAVPNPLTKIEK---LEAIPGTVPNLITPPGGCRFHPRCP 302
           +   +++F NP+HPYTQ LL AVP P   +E+   L+   G+  +  T            
Sbjct: 232 VAETEELFNNPIHPYTQALLSAVPIPDPILERKKVLKVYEGSQHDYETDK---------- 281

Query: 303 KVMSICKEKVPELKEIEPGHFV 324
                     P + EI PGH+V
Sbjct: 282 ----------PSMVEIRPGHYV 293


>emb|CAA61526.1| (X89237) oligopeptidepermease [Streptococcus pyogenes]
           Length = 307
           
 Score =  185 bits (466), Expect = 5e-46
 Identities = 117/319 (36%), Positives = 180/319 (55%), Gaps = 28/319 (8%)

Query: 6   EPILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIESP 65
           E +++V++L + F        A++  +F + KGETF+LVGE+G GK+   RAI  L ++ 
Sbjct: 3   EKLVEVKDLEISFGEGKKKFGAVKNANFFIKKGETFSLVGESGSGKTTIGRAIIGLNDTS 62

Query: 66  GRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQIAEA 125
                GQ+LY   DG V++  K   E    IR  +I  IFQDP ASL+   TV Y I+E 
Sbjct: 63  S----GQILY---DGKVINGRKSKSEANELIR--KIQMIFQDPAASLNERATVDYIISEG 113

Query: 126 MEVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGISNNPRI 185
           +      K+ +E  +K  +++  V +   +  +  YPHE SGG +QR+ I   +  NP  
Sbjct: 114 LYNFNLFKTEEERKEKIKNMMAEVGLL--SEHLTRYPHEFSGGQRQRIGIARALVMNPEF 171

Query: 186 LIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYAGKIVE 245
           +IADEP +ALDV+++AQ+L+LL +M+ +   T + I H+L VV   +DR+AV++ G IVE
Sbjct: 172 VIADEPISALDVSVRAQVLNLLKRMQAEKGLTYLFIAHDLSVVRFISDRIAVIHKGVIVE 231

Query: 246 IGTVDQIFKNPLHPYTQGLLRAVPNPLTKIEKLEAIPGTVPNLITPPGGCRFHPRCPKVM 305
           +   +++F NP+HPYTQ LL AVP P   +E+ + +               +H   P   
Sbjct: 232 VAETEELFNNPIHPYTQSLLSAVPIPDPILERQKEL-------------VVYH---PDQH 275

Query: 306 SICKEKVPELKEIEPGHFV 324
               +K P + EI+P HFV
Sbjct: 276 DYTLDK-PSMVEIKPNHFV 293


>gb|AAG32327.1| (AF305548) oligopeptide permease [Streptococcus pyogenes]
           Length = 307
           
 Score =  185 bits (466), Expect = 5e-46
 Identities = 117/319 (36%), Positives = 180/319 (55%), Gaps = 28/319 (8%)

Query: 6   EPILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIESP 65
           E +++V++L + F        A++  +F + KGETF+LVGE+G GK+   RAI  L ++ 
Sbjct: 3   EKLVEVKDLEISFGEGKKKFVAVKNANFFIKKGETFSLVGESGSGKTTIGRAIIGLNDTS 62

Query: 66  GRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQIAEA 125
                GQ+LY   DG V++  K   E    IR  +I  IFQDP ASL+   TV Y I+E 
Sbjct: 63  S----GQILY---DGKVINGRKSKSEANELIR--KIQMIFQDPAASLNERATVDYIISEG 113

Query: 126 MEVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGISNNPRI 185
           +      K+ +E  +K  +++  V +   +  +  YPHE SGG +QR+ I   +  NP  
Sbjct: 114 LYNFNLFKTEEERKEKIKNMMAEVGLL--SEHLTRYPHEFSGGQRQRIGIARALVMNPEF 171

Query: 186 LIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYAGKIVE 245
           +IADEP +ALDV+++AQ+L+LL +M+ +   T + I H+L VV   +DR+AV++ G IVE
Sbjct: 172 VIADEPISALDVSVRAQVLNLLKRMQAEKGLTYLFIAHDLSVVRFISDRIAVIHKGVIVE 231

Query: 246 IGTVDQIFKNPLHPYTQGLLRAVPNPLTKIEKLEAIPGTVPNLITPPGGCRFHPRCPKVM 305
           +   +++F NP+HPYTQ LL AVP P   +E+ + +               +H   P   
Sbjct: 232 VAETEELFNNPIHPYTQSLLSAVPIPDPILERQKEL-------------VVYH---PDQH 275

Query: 306 SICKEKVPELKEIEPGHFV 324
               +K P + EI+P HFV
Sbjct: 276 DYTLDK-PSMVEIKPNHFV 293


>pir||E75068 dipeptide abc transporter, ATP-binding protein (dppf) PAB1347 -
           Pyrococcus abyssi (strain Orsay)
           >gi|5458955|emb|CAB50442.1| (AJ248287) dipeptide ABC
           transporter, ATP-binding protein (dppF) [Pyrococcus
           abyssi]
           Length = 319
           
 Score =  183 bits (460), Expect = 2e-45
 Identities = 113/327 (34%), Positives = 177/327 (53%), Gaps = 17/327 (5%)

Query: 8   ILQVRNLTVHFYTYAGI-----VKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLI 62
           +L+V+NLT  F +  G+     V+A++ V+F + +GE  +LVGE+G GK+   + I +LI
Sbjct: 2   LLEVQNLTKIFTS--GLIGGYQVRAVDNVTFSIKEGEIVSLVGESGSGKTTIGKLILRLI 59

Query: 63  ESPGRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQI 122
           +       G++L+  +D    D  KL     + ++      +FQDP AS +PLY V    
Sbjct: 60  KP----TSGKILFKGEDIWSFDKDKLMNYYYKNVQA-----VFQDPFASFNPLYKVDRVF 110

Query: 123 AEAMEVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGISNN 182
                   K  S  E  +     L+SV + +P   +  +PH+LSGG  QR++I   +   
Sbjct: 111 DLVFRTFLKNVSDVEKDELVRRALESVGL-NPREILGKFPHQLSGGQLQRILIARALLVE 169

Query: 183 PRILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYAGK 242
           P +LIADE  + LD + +  +L+LL + ++ +  +VI ITH+L +    +D++ +MY G 
Sbjct: 170 PSLLIADEAVSMLDASTRIDVLNLLGEFRDNHGTSVIFITHDLALGYYISDKIIIMYRGS 229

Query: 243 IVEIGTVDQIFKNPLHPYTQGLLRAVPNPLTKIEKLEAIPGTVPNLITPPGGCRFHPRCP 302
           IVE G  +++F NPLHPYT+ LL +VP+   K E     P      +    GC+F PRC 
Sbjct: 230 IVEWGDTEKVFDNPLHPYTKMLLESVPDLNVKWEFKGIEPEREEGKVWELKGCKFAPRCS 289

Query: 303 KVMSICKEKVPELKEIEPGHFVACHLY 329
                C +  PE  E+E  H+VACHLY
Sbjct: 290 LAKDKCWKIRPEPVEVEKNHWVACHLY 316


>pir||T35941 probable ABC-type transport systsem ATP-binding protein -
           Streptomyces coelicolor >gi|4158200|emb|CAA22763.1|
           (AL035206) putative ABC transporter ATP-binding protein
           [Streptomyces coelicolor A3(2)]
           Length = 335
           
 Score =  178 bits (448), Expect = 6e-44
 Identities = 124/343 (36%), Positives = 174/343 (50%), Gaps = 48/343 (13%)

Query: 7   PILQVRNLTVHFYTYAGI-VKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLI--- 62
           P+L VR L+V F    G  V A+    FDV  GE  AL+GE+GCGKSV + A+  L+   
Sbjct: 6   PVLSVRGLSVRFLMPGGRRVAAVTDAHFDVAPGECLALIGESGCGKSVLASALLGLLPGN 65

Query: 63  -ESPGRIVEGQVLYYRDDGSVVDLLKLSEEEI-RKIRGNEIAYIFQDPHASLDPLYTVGY 120
            ++ GR + G +          DLL   E  + R +RG  I  + Q P A L P+ TV  
Sbjct: 66  AQTAGRALLGDL----------DLLAADERTLARTVRGRLIGLVPQSPAAHLTPVRTVRS 115

Query: 121 QIAEAME----VHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIG 176
           Q+AE +     V G  K+++E    A +         PA  ++++PHELSGG+ QR    
Sbjct: 116 QLAETVAELTGVRGGRKALREAAGAAAERAAF-----PADHLDHHPHELSGGLAQRAATA 170

Query: 177 IGISNNPRILIADEPTTALDVTIQAQILDLLNKMKEKYKATV----------ILITHNLG 226
           + +  +  +L+ADEPTT LD  +  + +D L +  +  +  V          ++ITH+L 
Sbjct: 171 LALVGDAPLLLADEPTTGLDRDLVDRTVDELRRHVDDAEGKVARGDAGSRALLMITHDLA 230

Query: 227 VVAETADRVAVMYAGKIVEIGTVDQIF--KNPLHPYTQGLLRAVPNPLTKIEKLEAIPGT 284
             A  ADRVAVMYAG+IVE+      F    P HPY++GLL A+P+          IPG 
Sbjct: 231 AAARIADRVAVMYAGRIVELADAGAFFGAPGPRHPYSRGLLDALPD-----RGFTPIPGL 285

Query: 285 VPNLITPPGGCRFHPRCPKVMSICKEKVPELKEIEPGHFVACH 327
            P L   PGGC F  RC +    C   +P L+     H VACH
Sbjct: 286 PPELGALPGGCAFAARCDRATDAC-AALPPLR-----HAVACH 322


>pir||C72421 oligopeptide ABC transporter, ATP-binding protein - Thermotoga
           maritima (strain MSB8)
           >gi|4980563|gb|AAD35169.1|AE001694_5 (AE001694)
           oligopeptide ABC transporter, ATP-binding protein
           [Thermotoga maritima]
           Length = 320
           
 Score =  177 bits (445), Expect = 1e-43
 Identities = 113/342 (33%), Positives = 181/342 (52%), Gaps = 43/342 (12%)

Query: 7   PILQVRNLTVHFYTYAGI-----VKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQL 61
           P+L+++NLT   +T   I     + A++ V+FD+ + E F L GE+GCGK+ T++ I   
Sbjct: 2   PLLEIKNLT-KIFTIGSIFSRTRIVAVDNVNFDINEAEIFTLAGESGCGKTTTAKIILGF 60

Query: 62  IESPGRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQ 121
            E       G+++Y    G  +D +  +E+E R++   EI  +FQ+P ++ +PL  V   
Sbjct: 61  EEP----TSGEIIY---KGRKIDRVHQNEKERRELL-KEIQAVFQNPFSTFNPLRKVDRY 112

Query: 122 IAEAMEVHGKIKSIKEGIQKAVDILKSVLIP---DPARRVNNYPHELSGGMKQRVVIGIG 178
             E +   G    I +  +KA +I+K  L             YP E SGG  QR+ I   
Sbjct: 113 FYETLFNLG----IADTKKKAEEIIKEKLSAVGISFEEFSEKYPSEFSGGQLQRISIARA 168

Query: 179 ISNNPRILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVM 238
           +  NP +L+ADEP + +D +++  I++L   +KE+Y  +V+ ITH+L      +DR+AVM
Sbjct: 169 LLTNPSLLVADEPVSMVDASLRMSIVNLFKDLKEQYGVSVLYITHDLTTAYYVSDRIAVM 228

Query: 239 YAGKIVEIGTVDQIFKNPLHPYTQGLLRAVPNP-----------LTKIEKLEAIPGTVPN 287
           + G IVE+G  +++   P HPYTQ L  +VP P           L++ E+ E +      
Sbjct: 229 FRGNIVELGPAEKVLMEPKHPYTQLLRESVPEPDPKKKWDIRIKLSETEQAEYL------ 282

Query: 288 LITPPGGCRFHPRCPKVMSICKEKVPELKEIEPGHFVACHLY 329
                 GC+F  RCPK M IC+++ P   E++ G  V C LY
Sbjct: 283 ----RQGCKFAGRCPKAMDICRKEPPPYFEVD-GVQVKCWLY 319


>gi|10954710 hypothetical ABC-transporter gene~similar to moaD gene
           [Agrobacterium rhizogenes] >gi|8918710|dbj|BAA97775.1|
           (AB039932) hypothetical ABC-transporter gene~similar to
           moaD gene [Agrobacterium rhizogenes]
           >gi|10567374|dbj|BAB16183.1| (AP002086) hypothetical
           ABC-transporter gene~similar to moaD gene [Agrobacterium
           rhizogenes]
           Length = 603
           
 Score =  176 bits (441), Expect = 4e-43
 Identities = 107/284 (37%), Positives = 156/284 (54%), Gaps = 17/284 (5%)

Query: 6   EPILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIESP 65
           +PIL V NL+V         + ++ V F +  GE   LVGE G GKSV +RA+   I++P
Sbjct: 3   DPILAVSNLSVDLLRDGSKRRIVDNVDFALQPGEVLGLVGEAGSGKSVLARAMVNAIQAP 62

Query: 66  GRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQIAEA 125
             I  GQV++   +G   D+L L    +R IRGN I +I  +P  SLDP   +G+QI E 
Sbjct: 63  LDISSGQVIF---EGK--DVLSLDARGLRSIRGNRIGFIGANPMGSLDPRLPIGHQIVE- 116

Query: 126 MEVHGKIKSIKEGIQKA------VDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGI 179
                K++S++  I KA      +D+L  V IP P  R +  P + SGGM QRV+I   +
Sbjct: 117 -----KLRSVRPDIGKAEAKEKVLDLLGRVHIPSPRSRFHEAPFQFSGGMMQRVMIVDAL 171

Query: 180 SNNPRILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMY 239
            + P ++IAD  T  LDVT+ AQI+ L++ ++E      + I+ +L VV++ A+R  VM 
Sbjct: 172 VSEPSLVIADNITQPLDVTVAAQIIRLIDNLRESLDTAFLFISSSLPVVSKIAERTLVMQ 231

Query: 240 AGKIVEIGTVDQIFKNPLHPYTQGLLRAVPNPLTKIEKLEAIPG 283
            G+IVE G    I  NP   YT+ LL  +P+    +   EA  G
Sbjct: 232 GGRIVEQGETADIAANPQQAYTRALLSRIPSIWKNVSAPEAKDG 275


 Score =  164 bits (410), Expect = 2e-39
 Identities = 108/307 (35%), Positives = 166/307 (53%), Gaps = 22/307 (7%)

Query: 25  VKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIESPGRIVEGQVLYYRDDGSVVD 84
           VKA+  VSF V  GE F +VGE+GCGKS  +R +  L E P     G++ +   +     
Sbjct: 302 VKAVRDVSFTVKAGENFGIVGESGCGKSTLTRLLAWL-EQPNA---GRIAFLGKN----- 352

Query: 85  LLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQIAEAMEVHGKIKSIKEGIQKAVD 144
           L  LS   + ++R      + QDP+ SL    ++   I E + +HG  +  ++  Q+A +
Sbjct: 353 LSNLSARSLTEMR-KSFQLLLQDPYGSLPAGMSIIRMIEEPLLIHGVAR--RDAEQRAQE 409

Query: 145 ILKSV-LIPDPARRVNNYPHELSGGMKQRVVIGIGISNNPRILIADEPTTALDVTIQAQI 203
            ++ V L  D A R+   P  LS G +QR+ I   +   PR+LI DE  +ALD   QA++
Sbjct: 410 AMREVGLHADLAERL---PVGLSAGQRQRINIARALVLKPRLLILDETLSALDQVEQAEL 466

Query: 204 LDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYAGKIVEIGTVDQIFKNPLHPYTQG 263
           LDL  +++  +  + I I+H+L +V     RVAVMY G+IVE+     +F++P HPYT+ 
Sbjct: 467 LDLFKRLQAAHGFSYIFISHDLALVRRICHRVAVMYLGRIVELADNKTLFEHPHHPYTRA 526

Query: 264 LLRAVP----NPLTKIEKLEAIPGTVPNLITPPGGCRFHPRCPKVMSICKEKVPELKEIE 319
           LL A+P    N     + L  + G  P+ I  P GC F  RCP+  S C++  P L+  +
Sbjct: 527 LLSAMPTLEENRFPGAQYL--LDGEPPSPIHLPVGCSFRSRCPRAQSDCEKTDPMLEGSD 584

Query: 320 PGHFVAC 326
            G++ AC
Sbjct: 585 GGNYAAC 591


>pir||A70482 ABC transporter - Aquifex aeolicus >gi|2984331|gb|AAC07852.1|
           (AE000774) ABC transporter [Aquifex aeolicus]
           Length = 305
           
 Score =  169 bits (425), Expect = 3e-41
 Identities = 112/334 (33%), Positives = 184/334 (54%), Gaps = 43/334 (12%)

Query: 8   ILQVRNLTVHFYTYAGIVK-----AIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLI 62
           +L ++NLT  +   AG ++     A+++VS  + +G+  A+VGE+G GKS   + I +L 
Sbjct: 3   LLSIQNLTKVYKVPAGFLRKKNFFALKEVSLSIKQGDFLAIVGESGSGKSTLGKIILRL- 61

Query: 63  ESPGRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQI 122
           E P    +G+V +   D     +  + +E  RK+       +FQDP +SL+P   V   +
Sbjct: 62  EKP---TKGKVSFKGKD-----IFSMGKEYTRKVSA-----VFQDPRSSLNPRMKVEEIL 108

Query: 123 AEAMEVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGISNN 182
            E + VH ++K  KE + K   +L+ V + +    +   P ++SGG  QRV I   +   
Sbjct: 109 EEPLIVH-RVKGRKERVLK---VLQRVRLSEEL--LEKRPLQISGGQAQRVAIARALILE 162

Query: 183 PRILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYAGK 242
           P +++ADEPT +LDV++Q +IL+L  ++  K   +   +TH++ VV + A+ V V+YAG 
Sbjct: 163 PELIVADEPTASLDVSVQEEILELFKELNSK-GISFFFVTHDIRVVEKVANMVGVIYAGI 221

Query: 243 IVEIGTVDQIFKNPLHPYTQGLLRAVP-------NPLTKIEKLEAIPGTVPNLITPPGGC 295
           ++E+G  +++ KNPLHPYT+ LL  VP        PL  +++ E        +  P  GC
Sbjct: 222 LMELGKKEEVLKNPLHPYTKFLLENVPVRHPKDRKPLKYLQEEE--------VSIPEEGC 273

Query: 296 RFHPRCPKVMSICKEKVPELKEIEPGHFVACHLY 329
            F+PRCP+ M  CK K     E+  G  +AC+LY
Sbjct: 274 PFYPRCPEAMEECK-KFIRRSEVN-GRLLACNLY 305


>pir||B64551 oligopeptide ABC transporter, ATP-binding protein - Helicobacter
           pylori (strain 26695) >gi|2313342|gb|AAD07317.1|
           (AE000544) oligopeptide ABC transporter, ATP-binding
           protein (oppD) [Helicobacter pylori 26695]
           Length = 516
           
 Score =  166 bits (416), Expect = 3e-40
 Identities = 101/276 (36%), Positives = 162/276 (58%), Gaps = 20/276 (7%)

Query: 8   ILQVRNLT----VHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIE 63
           +L+++NL      HF        +++ ++  +   E  A+VGE+G GKS  +  I +L  
Sbjct: 1   MLEIKNLNCVLNAHF--------SLQNINISLNPSERVAIVGESGSGKSSIANIIMRL-N 51

Query: 64  SPGRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQIA 123
              +   G+VL+        +LLK SEE ++ +RGN IAYI QDP +SL+PL+ +G Q++
Sbjct: 52  PRFKPHNGEVLF-----ETTNLLKESEEFMQHLRGNAIAYIAQDPLSSLNPLHKIGKQMS 106

Query: 124 EAMEVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGISNNP 183
           EA  +H K  S     ++ ++ +K V + +  + ++ YP+ELSGG +QRV I +GI N P
Sbjct: 107 EAYFLHYKNASKTLLKEQVLNAMKQVQLDE--KFLDRYPYELSGGQRQRVCIAMGIINAP 164

Query: 184 RILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYAGKI 243
           ++LI DEPTTALD  IQ QILDL  ++  +    ++ I+H+L  V   ADRV V+  G+I
Sbjct: 165 KLLICDEPTTALDAQIQNQILDLPKQLSAEKNIALLFISHDLKAVKRLADRVYVLKKGEI 224

Query: 244 VEIGTVDQIFKNPLHPYTQGLLRAVPNPLTKIEKLE 279
           VE      +F +P H Y++ L++A   P   ++ L+
Sbjct: 225 VETNLTKDLFNDPKHEYSKLLIQASNLPAKNLKALD 260


 Score =  135 bits (336), Expect = 8e-31
 Identities = 87/272 (31%), Positives = 152/272 (54%), Gaps = 18/272 (6%)

Query: 1   MRKVPEPILQVRNLTVHFYTYAGIVKAIEK-----VSFDVYKGETFALVGETGCGKSVTS 55
           ++ + E +L+V++ +V++        +++K     V+F +   E   ++GE+G GKS  +
Sbjct: 256 LKALDETLLEVKDFSVYYLQKRFFRPSLKKPLIASVNFSLKAKENIGIIGESGSGKSSLA 315

Query: 56  RAITQLIESPGRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPL 115
             + +L  + G   E ++L      SV  L   + +  RKI    +  +FQDP+ASL+P 
Sbjct: 316 LGLLKLALNSG---EEKIL----GQSVGSLNSKAFKPYRKI----LQMVFQDPYASLNPR 364

Query: 116 YTVGYQIAEAMEVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVI 175
            ++   + EA+       S +E    A   L+ V +      +N+Y +ELSGG +QRV I
Sbjct: 365 LSIQSILTEALRFAYPKASKEEWHHLAKLCLEEVCLSHEL--LNSYAYELSGGERQRVAI 422

Query: 176 GIGISNNPRILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRV 235
              I+  P+I++ DEPT+ALD +IQ  +L+LL  ++EK   + + I+H+L V+    D+V
Sbjct: 423 ARAIALKPKIILLDEPTSALDKSIQKSVLELLLDLQEKQDLSYLFISHDLDVIKAFCDKV 482

Query: 236 AVMYAGKIVEIGTVDQIFKNPLHPYTQGLLRA 267
            V+  GK+VE+ T+ ++F NP H YT+ LL +
Sbjct: 483 LVISEGKVVEMNTIKEVFDNPKHAYTKRLLES 514


>pir||E71957 ABC transporter, ATP-binding protein - Helicobacter pylori  (strain
           J99) >gi|4154751|gb|AAD05811.1| (AE001461) ABC
           transporter, ATP-binding protein [Helicobacter pylori
           J99]
           Length = 516
           
 Score =  165 bits (413), Expect = 8e-40
 Identities = 97/272 (35%), Positives = 163/272 (59%), Gaps = 12/272 (4%)

Query: 8   ILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIESPGR 67
           +L+++NL     ++     +++ ++  +   E  A+VGE+G GKS  +  + +L     +
Sbjct: 1   MLEIKNLNCVLNSHF----SLQNINISLSYSERVAIVGESGSGKSSIANLVMRL-NPRFK 55

Query: 68  IVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQIAEAME 127
              G++L+        +LLK SE  ++ +RGN IAYI QDP +SL+PL+ +G Q++EA  
Sbjct: 56  PHNGEILF-----ETTNLLKESEAFMQHLRGNIIAYIAQDPLSSLNPLHKIGKQMSEAYF 110

Query: 128 VHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGISNNPRILI 187
           +H K  S     ++ ++ +K V + +  + ++ YP+ELSGG +QRV I +GI N P++LI
Sbjct: 111 LHHKNASQVLLKEQVLNAMKQVQLDE--KFLDRYPYELSGGQRQRVCIAMGIINAPKLLI 168

Query: 188 ADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYAGKIVEIG 247
            DEPTTALD  IQ QILDLL ++  +    ++ I+H+L  V   ADRV V+  G+IVE  
Sbjct: 169 CDEPTTALDAQIQNQILDLLKQLSVEKNIALLFISHDLKAVKRLADRVYVLKKGEIVETN 228

Query: 248 TVDQIFKNPLHPYTQGLLRAVPNPLTKIEKLE 279
              ++F +P H Y++ L++A   P   ++ L+
Sbjct: 229 LTKELFNDPKHEYSKLLIQASNLPAKNLKALD 260


 Score =  136 bits (339), Expect = 4e-31
 Identities = 91/273 (33%), Positives = 150/273 (54%), Gaps = 20/273 (7%)

Query: 1   MRKVPEPILQVRNLTVHFYTYAGIVKAIEK-----VSFDVYKGETFALVGETGCGKSVTS 55
           ++ + E +L+V++ +V++        +++K     V F +   E   ++GE+G GKS  +
Sbjct: 256 LKALDETLLEVKDFSVYYLQKRFFRPSLKKPLIASVDFSLKAKENIGIIGESGSGKSSLA 315

Query: 56  RAITQLIESPGRIVEGQVLYYRDDGSVVDLLKLSE-EEIRKIRGNEIAYIFQDPHASLDP 114
             + +L  + G   E ++L     G  V LL     +  RKI    +  +FQDP+ASL+P
Sbjct: 316 LGLLKLALNSG---EEKIL-----GQSVGLLNSKAFKPYRKI----LQMVFQDPYASLNP 363

Query: 115 LYTVGYQIAEAMEVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVV 174
             ++   + EA+       S +E    A   L+ V +      +N Y +ELSGG +QRV 
Sbjct: 364 RLSIQSILIEALRFAYPKASQQEWHHLAELCLEEVCLNPEL--LNFYAYELSGGERQRVA 421

Query: 175 IGIGISNNPRILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADR 234
           I   I+  PRI++ DEPT+ALD +IQ  +L+LL  ++EK   + + I+H+L V+    DR
Sbjct: 422 IARAIALKPRIILLDEPTSALDKSIQKSVLELLLNLQEKQDLSYLFISHDLDVIKAFCDR 481

Query: 235 VAVMYAGKIVEIGTVDQIFKNPLHPYTQGLLRA 267
           V V+  GKIVE G ++++F NP H YT+ LL +
Sbjct: 482 VLVVSEGKIVETGAIEEVFDNPKHAYTKRLLES 514


>pir||E72393 oligopeptide ABC transporter, ATP-binding protein - Thermotoga
           maritima (strain MSB8)
           >gi|4980804|gb|AAD35392.1|AE001712_5 (AE001712)
           oligopeptide ABC transporter, ATP-binding protein
           [Thermotoga maritima]
           Length = 316
           
 Score =  164 bits (411), Expect = 1e-39
 Identities = 109/332 (32%), Positives = 178/332 (52%), Gaps = 30/332 (9%)

Query: 9   LQVRNLTVHF-----YTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIE 63
           + VRNLT  F     ++   +V AI+ VSF++  GE F+L GE+GCGK+ T++ +  L E
Sbjct: 3   VSVRNLTKIFRVGSIFSLKKLV-AIDNVSFEIGSGEIFSLAGESGCGKTTTAKILLGLEE 61

Query: 64  SPGRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQIA 123
                  G+VLY   DG  + L    E E+  ++  ++  + Q+P ++ +P   V   + 
Sbjct: 62  P----TNGEVLY---DG--IKLKDFVENEMHFLK--KVQTVQQNPFSTFNPFRKVEDYLF 110

Query: 124 EAMEVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGISNNP 183
           + + +  K+ + K+   + ++   SV+  +       YP E SGG  QR+ I   +  NP
Sbjct: 111 KTV-LRFKMANTKDEALRLIEEKLSVVGLNFDEIKGRYPSEFSGGQLQRISIARALLTNP 169

Query: 184 RILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYAGKI 243
             L+ADEP + +D +++  I++L   +KE++  +++ ITH+L      AD++A+M+ G I
Sbjct: 170 SFLVADEPVSMIDASLRISIVNLFRDLKERFGISILYITHDLSTAYYVADKLAIMFRGSI 229

Query: 244 VEIGTVDQIFKNPLHPYTQGLLRAVPNPLTKIEKLEAIPGTVPNLITP------PGGCRF 297
           VE+G    I   P HPYT+ L  ++P P  + E  E I     NL +         GC+F
Sbjct: 230 VEMGRAQDILDTPFHPYTKLLKSSIPVPDPEYEWDENI-----NLSSTEREEFFAKGCKF 284

Query: 298 HPRCPKVMSICKEKVPELKEIEPGHFVACHLY 329
             RCP+VMSIC+E VP   ++  G  V C LY
Sbjct: 285 ASRCPEVMSICRESVPPDFDVN-GRVVKCWLY 315


>pir||A72284 oligopeptide ABC transporter, ATP-binding protein - Thermotoga
           maritima (strain MSB8)
           >gi|4981747|gb|AAD36271.1|AE001776_7 (AE001776)
           oligopeptide ABC transporter, ATP-binding protein
           [Thermotoga maritima]
           Length = 319
           
 Score =  163 bits (408), Expect = 3e-39
 Identities = 110/332 (33%), Positives = 175/332 (52%), Gaps = 24/332 (7%)

Query: 6   EPILQVRNLT----VHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQL 61
           E  L ++NLT    +    +   + A++ VSF + + E F L GE+GCGKS T++ I   
Sbjct: 2   EDTLILKNLTKVYSIGSLLFRSKITAVDDVSFSLKRAEIFTLAGESGCGKSTTAKMILGF 61

Query: 62  IESPGRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQ 121
            E       G +++  +  S+    K  ++ +RK++      +FQ+P  S +PL TV   
Sbjct: 62  EEP----TSGDIIF--EGNSIQWWKKRKKDFLRKVQA-----VFQNPFESFNPLLTVDDI 110

Query: 122 IAEAMEVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNN-YPHELSGGMKQRVVIGIGIS 180
             E +  +G   S  E  +K +D  K  L+      +N  Y  ELSGG  QR  I   + 
Sbjct: 111 FFETVMNYGLANSRNEA-EKLIDE-KLQLVGLKFEDINGRYQSELSGGQLQRASIARSLL 168

Query: 181 NNPRILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYA 240
           +NP +LIADEP + +D +++  I++L  K++++   +VI ITH+L      +DR+A+M+ 
Sbjct: 169 SNPSLLIADEPVSMVDASLRMSIVNLFAKLRDQLGVSVIYITHDLATAYYVSDRIAIMFR 228

Query: 241 GKIVEIGTVDQIFKNPLHPYTQGLLRAVPNPLTKIEKLEAIPGTVPNLITP---PGGCRF 297
           G IVE G VD++  +P HPYTQ L  ++P+P    EK  +   TV +         GC+F
Sbjct: 229 GNIVETGPVDKVLIDPKHPYTQLLRESIPDP--DPEKKWSREITVSDTEYEEYLKEGCKF 286

Query: 298 HPRCPKVMSICKEKVPELKEIEPGHFVACHLY 329
             RCP V  IC+ + P+   +  G  V CH+Y
Sbjct: 287 AGRCPYVKEICRREKPD-DVLVDGVLVKCHIY 317


>gb|AAK42790.1| ABC transporter, ATP binding protein [Sulfolobus solfataricus]
           Length = 324
           
 Score =  152 bits (380), Expect = 6e-36
 Identities = 103/332 (31%), Positives = 176/332 (52%), Gaps = 27/332 (8%)

Query: 8   ILQVRNLTVHFYTYAGIVK-----AIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLI 62
           +++++ ++V F    G+ K     A++ VS  + +G+   ++GE+G GK+   R I  L 
Sbjct: 3   LMELKGVSVIFEDKVGLFKKRKFYALKDVSLSMNQGDLLIVLGESGAGKTTLGRVIVGL- 61

Query: 63  ESPGRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQI 122
           + P     G+V+Y   DG   ++ K   +  +K R  ++  I QDP+++L P      +I
Sbjct: 62  QKP---TSGEVVY---DG--YNIWKNKRKIFKKYR-KDVQLIPQDPYSTL-PFNKTVEEI 111

Query: 123 AEAMEVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGISNN 182
             A  +  +  +  E  ++ +++L+ V +      +  YPH+LSGG KQR+ I   +S N
Sbjct: 112 LVAPILRWEKINKDELRKRLINLLELVKLTPAEEFLGKYPHQLSGGQKQRLSIARSLSVN 171

Query: 183 PRILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAE-----TADRVAV 237
           PRI++ADEP T +D +++  IL+ L ++K +   T++ ITH++ +              V
Sbjct: 172 PRIIVADEPVTMVDASLRIGILNTLAEIKNRLNLTMVFITHDIPIARYFYHLFDKGNTIV 231

Query: 238 MYAGKIVEIGTVDQIFKNPLHPYTQGLLRAVPNPLTKIEKLEAIPGTVPNLITPPGGCRF 297
           M+AG+IVE   +++I K+PLHPYT  L++  P+    I+ L        N      GC +
Sbjct: 232 MFAGRIVERADLEEILKDPLHPYTNDLIKLTPS----IDNLYKEINVKINYERVEKGCPY 287

Query: 298 HPRCPKVMSICKEKVPELKEIEPGHFVACHLY 329
             RCP  M ICK + P+L   +  H VAC LY
Sbjct: 288 RLRCPFAMDICKNEEPKL--FKYSHEVACFLY 317


>pir||G72049 peptide ABC transporter, ATP-binding protein CP0064 [imported] -
           Chlamydophila pneumoniae (strains CWL029 and AR39)
           >gi|4376984|gb|AAD18822.1| (AE001650) ABC ATPase
           Dipeptide Transport [Chlamydophila pneumoniae CWL029]
           >gi|7189001|gb|AAF37953.1| (AE002170) peptide ABC
           transporter, ATP-binding protein [Chlamydophila
           pneumoniae AR39] >gi|8979055|dbj|BAA98890.1| (AP002547)
           ABC ATPase dipeptide transport [Chlamydophila pneumoniae
           J138]
           Length = 324
           
 Score =  148 bits (369), Expect = 1e-34
 Identities = 107/335 (31%), Positives = 172/335 (50%), Gaps = 30/335 (8%)

Query: 5   PEPILQVRNLTVHFYT----YAGIVKA---IEKVSFDVYKGETFALVGETGCGKSVTSRA 57
           P+P++Q  +LT H+Y     + G   A   ++ VSF +Y      L+GE+G GKS  + A
Sbjct: 6   PQPLIQATSLTKHYYKRSFWFQGKTIASRPVDDVSFSLYSRRAVGLIGESGSGKSTLALA 65

Query: 58  ITQLIESPGRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYT 117
           +  L+     +  G + +   +G+ +   KL  +  R    +++  +FQ+P ASL+P  T
Sbjct: 66  LAGLLP----LTSGFLTF---NGTPI---KLHSKHGRHQLRSQVRLVFQNPQASLNPRKT 115

Query: 118 VGYQIAEAMEVHGKIKSIKEGIQKAV-DILKSVLIPDPARRVNNYPHELSGGMKQRVVIG 176
           +   +  ++  H  +   KE +   V + L+ V + +       YPH+LSGG +QRV I 
Sbjct: 116 ILDSLGHSLLYHKLVP--KEKVLATVREYLELVGLSE--EYFYRYPHQLSGGQQQRVSIA 171

Query: 177 IGISNNPRILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVA 236
             +   P+++I DE  +ALD++IQAQIL++L ++++K   T + I+H+L VV      V 
Sbjct: 172 RALLGVPQLIICDEIVSALDLSIQAQILNMLAELQKKLSLTYLFISHDLAVVRSFCTEVF 231

Query: 237 VMYAGKIVEIGTVDQIFKNPLHPYTQGLLRA--VPNPLTKIEKLEAIPGTVPNLITPPGG 294
           +MY G+IVE G   +IF +P HPYT+ LL A     P  +  K         +  +   G
Sbjct: 232 IMYKGQIVEKGNTKRIFSDPQHPYTRMLLNAQLPETPDQRQSKPIFQEYHKDSEESCSTG 291

Query: 295 CRFHPRCPKVMSICKEKVPELKEIEPGHFVACHLY 329
           C F+ RCP+    CK       EI P    A H Y
Sbjct: 292 CYFYNRCPQKQEACK------SEIIPNQGDAHHTY 320


>gb|AAF77616.1|AF151721_2 (AF151721) oligopeptide permease subunit AmiF-like protein
           [Streptococcus thermophilus]
           Length = 238
           
 Score =  146 bits (366), Expect = 2e-34
 Identities = 88/249 (35%), Positives = 144/249 (57%), Gaps = 11/249 (4%)

Query: 4   VPEPILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIE 63
           +PE +++V+++ + F        A+   +F + KGETF+LVGE+G GK+   RAI  L +
Sbjct: 1   MPEKLVEVKDVEISFGEGKKKFVAVHNANFFINKGETFSLVGESGSGKTTIGRAIIGLND 60

Query: 64  SPGRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQIA 123
           +      G++++   DG  ++      E+   IR   I  IFQDP ASL+   TV Y ++
Sbjct: 61  TSN----GEIIF---DGKKINGYLSHSEKNDLIR--RIQMIFQDPAASLNERATVDYILS 111

Query: 124 EAMEVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGISNNP 183
           E +      K  +E   K  +I+K V + +    +  YPHE SGG +QR+ I   +   P
Sbjct: 112 EGLYNFHLYKDEEERKAKIKEIIKEVGLLE--EHLTRYPHEFSGGQRQRIGIARSLVMQP 169

Query: 184 RILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYAGKI 243
            ++IADEP +ALDV+++AQ+L+LL K +++   T + I H+L VV   +DR+AV+Y G I
Sbjct: 170 DLVIADEPISALDVSVRAQVLNLLKKFQKELGLTYLFIAHDLSVVRFISDRIAVIYKGTI 229

Query: 244 VEIGTVDQI 252
           VE+   +++
Sbjct: 230 VEVAETEEL 238


>pir||S56325 hisP protein-like nucleotide-binding protein phnK - Escherichia
           coli >gi|536941|gb|AAA96996.1| (U14003) HisP-like
           nucleotide binding protein (ATP-binding protein)
           [Escherichia coli] >gi|1790535|gb|AAC77058.1| (AE000482)
           ATP-binding component of phosphonate transport
           [Escherichia coli K12]
           Length = 252
           
 Score =  141 bits (353), Expect = 8e-33
 Identities = 91/268 (33%), Positives = 143/268 (52%), Gaps = 26/268 (9%)

Query: 6   EPILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIESP 65
           +P+L V NLT H Y      K    VSFD++ GE   +VGE+G GK+      TQL    
Sbjct: 3   QPLLSVNNLT-HLYAPG---KGFSDVSFDLWPGEVLGIVGESGSGKT------TQLKSIS 52

Query: 66  GRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQIAEA 125
            R+   Q   + ++ S   L  +SE + R++   E   + Q P   L    + G  I E 
Sbjct: 53  ARLTPQQGEIHYENRS---LYAMSEADRRRLLRTEWGVVHQHPLDGLRRQVSAGGNIGER 109

Query: 126 MEV-----HGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGIS 180
           +       +G I++  +   + V+I        PA R+++ P   SGGM+QR+ I   + 
Sbjct: 110 LMATGARHYGDIRATAQKWLEEVEI--------PANRIDDLPTTFSGGMQQRLQIARNLV 161

Query: 181 NNPRILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYA 240
            +P+++  DEPT  LDV++QA++LDLL  +  +    V+++TH+LGV    ADR+ VM  
Sbjct: 162 THPKLVFMDEPTGGLDVSVQARLLDLLRGLVVELNLAVVIVTHDLGVARLLADRLLVMKQ 221

Query: 241 GKIVEIGTVDQIFKNPLHPYTQGLLRAV 268
           G++VE G  D++  +P HPYTQ L+ +V
Sbjct: 222 GQVVESGLTDRVLDDPHHPYTQLLVSSV 249


>sp|P16678|PHNK_ECOLI PHOSPHONATES TRANSPORT ATP-BINDING PROTEIN PHNK
           >gi|96281|pir||C35719 phnK protein - Escherichia coli
           >gi|147206|gb|AAA24349.1| (J05260) HisP-like nucleotide
           binding protein (phnK) [Escherichia coli]
           >gi|216600|dbj|BAA14271.1| (D90227) ATP-binding protein
           [Escherichia coli]
           Length = 252
           
 Score =  141 bits (352), Expect = 1e-32
 Identities = 88/268 (32%), Positives = 143/268 (52%), Gaps = 26/268 (9%)

Query: 6   EPILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIESP 65
           +P+L V NLT H Y      K    VSFD++ GE   +VGE+G GK+   ++I+  +   
Sbjct: 3   QPLLSVNNLT-HLYAPG---KGFSDVSFDLWPGEVLGIVGESGSGKTTLLKSISARLTPQ 58

Query: 66  GRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQIAEA 125
               +G++ Y         L  +SE + R++   E   + Q P   L    + G  I E 
Sbjct: 59  ----QGEIHYENRS-----LYAMSEADRRRLLRTEWGVVHQHPLDGLRRQVSAGGNIGER 109

Query: 126 MEV-----HGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGIS 180
           +       +G I++  +   + V+I        PA R+++ P   SGGM+QR+ I   + 
Sbjct: 110 LMATGARHYGDIRATAQKWLEEVEI--------PANRIDDLPTTFSGGMQQRLQIARNLV 161

Query: 181 NNPRILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYA 240
            +P+++  DEPT  LDV++QA++LDLL  +  +    V+++TH+LGV    ADR+ VM  
Sbjct: 162 THPKLVFMDEPTGGLDVSVQARLLDLLRGLVVELNLAVVIVTHDLGVARLLADRLLVMKQ 221

Query: 241 GKIVEIGTVDQIFKNPLHPYTQGLLRAV 268
           G++VE G  D++  +P HPYTQ L+ +V
Sbjct: 222 GQVVESGLTDRVLDDPHHPYTQLLVSSV 249


>sp|P36637|SAPF_ECOLI PEPTIDE TRANSPORT SYSTEM ATP-BINDING PROTEIN SAPF
           >gi|7445934|pir||E64877 peptide transport system
           ATP-binding protein sapF - Escherichia coli
           >gi|470683|gb|AAA17671.1| (U08190) Shows similarity with
           ATP-binding proteins from other ABC-transport operons,
           Swiss Prot Accession Numbers P24137, P08007, P04285,
           P24136 [Escherichia coli] >gi|1279404|emb|CAA65941.1|
           (X97282) SapF protein [Escherichia coli]
           >gi|1742103|dbj|BAA14843.1| (D90766) Peptide transport
           system ATP-binding protein SapF. [Escherichia coli]
           >gi|1742112|dbj|BAA14851.1| (D90767) Peptide transport
           system ATP-binding protein SapF. [Escherichia coli]
           >gi|1787547|gb|AAC74372.1| (AE000227) putative
           ATP-binding protein of peptide transport system
           [Escherichia coli K12]
           Length = 268
           
 Score =  129 bits (320), Expect = 6e-29
 Identities = 79/271 (29%), Positives = 152/271 (55%), Gaps = 33/271 (12%)

Query: 6   EPILQVRNLTVHFYTYAG-----IVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQ 60
           E +L+VRNL+  F    G      V+A++ +SF + +G+T A++GE G GKS  ++ +  
Sbjct: 3   ETLLEVRNLSKTFRYRTGWFRRQTVEAVKPLSFTLREGQTLAIIGENGSGKSTLAKMLAG 62

Query: 61  LIE--SPGRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTV 118
           +IE  S   +++   L++ D                  R   I  IFQDP  SL+P    
Sbjct: 63  MIEPTSGELLIDDHPLHFGD---------------YSFRSQRIRMIFQDPSTSLNPRQ-- 105

Query: 119 GYQIAEAMEVHGKIKSIKEGIQKAVDILKSV----LIPDPARRVNNYPHELSGGMKQRVV 174
             +I++ ++   ++ +  E  Q+   I++++    L+PD    V+ YPH L+ G KQR+ 
Sbjct: 106 --RISQILDFPLRLNTDLEPEQRRKQIIETMRMVGLLPD---HVSYYPHMLAPGQKQRLG 160

Query: 175 IGIGISNNPRILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADR 234
           +   +   P+++IADE   +LD+++++Q+++L+ +++EK   + I +T ++G++   +D+
Sbjct: 161 LARALILRPKVIIADEALASLDMSMRSQLINLMLELQEKQGISYIYVTQHIGMMKHISDQ 220

Query: 235 VAVMYAGKIVEIGTVDQIFKNPLHPYTQGLL 265
           V VM+ G++VE G+   +  +PLH  T+ L+
Sbjct: 221 VLVMHQGEVVERGSTADVLASPLHELTKRLI 251


>sp|P36638|SAPF_SALTY PEPTIDE TRANSPORT SYSTEM ATP-BINDING PROTEIN SAPF
           >gi|628821|pir||S39589 peptide transport system
           ATP-binding protein sapF - Salmonella typhimurium
           >gi|414212|emb|CAA52288.1| (X74212) sapF [Salmonella
           typhimurium]
           Length = 268
           
 Score =  126 bits (313), Expect = 4e-28
 Identities = 79/271 (29%), Positives = 150/271 (55%), Gaps = 33/271 (12%)

Query: 6   EPILQVRNLTVHFYTYAG-----IVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQ 60
           E +L+VRNL+  F    G      V A++ +SF + + +T A++GE G GKS  ++ +  
Sbjct: 3   ETLLEVRNLSKTFRYRTGWFRRQTVDAVKPLSFTLRERQTLAIIGENGSGKSTLAKMLAG 62

Query: 61  LIE--SPGRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTV 118
           +IE  S   +++   L+Y D                  R   I  IFQDP  SL+P    
Sbjct: 63  MIEPTSGELLIDDHPLHYGD---------------YSFRSQRIRMIFQDPSTSLNPRQ-- 105

Query: 119 GYQIAEAMEVHGKIKSIKEGIQKAVDILKSV----LIPDPARRVNNYPHELSGGMKQRVV 174
             +I++ ++   ++ +  E  Q+   I++++    L+PD    V+ YPH L+ G KQR+ 
Sbjct: 106 --RISQILDFPLRLNTDLEPEQRRKQIVETMRMVGLLPD---HVSYYPHMLAPGQKQRLG 160

Query: 175 IGIGISNNPRILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADR 234
           +   +   P+++IADE   +LD+++++Q+++L+ +++EK   + I +T ++G++   +D+
Sbjct: 161 LARALILRPKVIIADEALASLDMSMRSQLINLMLELQEKQGISYIYVTQHIGMMKHISDQ 220

Query: 235 VAVMYAGKIVEIGTVDQIFKNPLHPYTQGLL 265
           V VM+ G++VE G+   +  +PLH  T+ L+
Sbjct: 221 VLVMHQGEVVERGSTADVLASPLHELTRRLI 251


>gi|11498955 phosphate ABC transporter, ATP-binding protein (pstB)
           [Archaeoglobus fulgidus] >gi|7442554|pir||F69419
           phosphate ABC transporter, ATP-binding protein (pstB)
           homolog - Archaeoglobus fulgidus
           >gi|2649216|gb|AAB89887.1| (AE001010) phosphate ABC
           transporter, ATP-binding protein (pstB) [Archaeoglobus
           fulgidus]
           Length = 251
           
 Score =  121 bits (300), Expect = 1e-26
 Identities = 82/263 (31%), Positives = 145/263 (54%), Gaps = 21/263 (7%)

Query: 6   EPILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIES- 64
           E    +RN +V++    GI      V+ ++Y+ +  A++G +GCGKS   R++ +LIE  
Sbjct: 2   EVAFDIRNFSVYYGNKVGI----RNVNLEIYRNKVTAIIGPSGCGKSTLLRSLNRLIELV 57

Query: 65  PGRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQIAE 124
            G  +EG+V++   DG  +    +   E+R+     I  +FQ P+     ++     +A 
Sbjct: 58  DGVRIEGEVIF---DGKNIYDDGVDAVELRR----RIGMVFQHPNPFPKSIFD---NVAY 107

Query: 125 AMEVHGKIKSIKEGIQKAVD--ILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGISNN 182
              VHG IK  KE +++ V+  + K+ L  +   R+++    LSGG +QR+ I   I+ N
Sbjct: 108 GPRVHG-IKD-KERLKEIVEESLKKAALWDEVKDRLSDSALGLSGGQQQRLCIARAIATN 165

Query: 183 PRILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYAGK 242
           P +++ DEPT+ALD    A+I +L+ ++K+ Y  TV+++THN+   A  +D VA  + G+
Sbjct: 166 PEVILFDEPTSALDPIAAAKIEELMVELKKNY--TVVVVTHNIQQAARISDYVAFFWMGE 223

Query: 243 IVEIGTVDQIFKNPLHPYTQGLL 265
           +VE G   ++F+ P    T+  L
Sbjct: 224 LVEYGKTAKVFEKPEKELTEKYL 246


>pir||H72275 phosphate ABC transporter, ATP-binding protein - Thermotoga
           maritima (strain MSB8)
           >gi|4981816|gb|AAD36335.1|AE001781_6 (AE001781)
           phosphate ABC transporter, ATP-binding protein
           [Thermotoga maritima]
           Length = 251
           
 Score =  119 bits (295), Expect = 5e-26
 Identities = 80/262 (30%), Positives = 137/262 (51%), Gaps = 19/262 (7%)

Query: 6   EPILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIES- 64
           EPI+++ N    F  Y G   A++ V+  ++K +  A++G +GCGK+   R+I ++ +  
Sbjct: 2   EPIIEIEN----FSAYYGEKIAVKNVTMKIFKNQITAIIGPSGCGKTTLLRSINRMNDHL 57

Query: 65  PGRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQIAE 124
           PG  VEG++ +   D  + D  +L   E RK     +  +FQ P      +Y     +A 
Sbjct: 58  PGFRVEGKIYFKGQD--IYDP-QLDVTEYRK----RVGMVFQKPTPFPMSIYD---NVAF 107

Query: 125 AMEVHG-KIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGISNNP 183
              +HG K K I + I +   + K+ L  +    +N     LSGG +QR+ I   ++  P
Sbjct: 108 GPRIHGVKSKHILDRIVEE-SLKKAALWDEVKSELNKSGTRLSGGQQQRLCIARALAVEP 166

Query: 184 RILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYAGKI 243
            +++ DEPT+ALD     +I  LL ++ E Y  T++++THN+G     AD +A MY G++
Sbjct: 167 EVILLDEPTSALDPIATQRIEKLLEELSENY--TIVIVTHNIGQAIRIADYIAFMYRGEL 224

Query: 244 VEIGTVDQIFKNPLHPYTQGLL 265
           +E G   +I + P +  T+  L
Sbjct: 225 IEYGPTREIVERPKNRLTEEYL 246


>gb|AAG18995.1| (AE004999) phosphate transport ATP-binding; PstB2 [Halobacterium
           sp. NRC-1]
           Length = 281
           
 Score =  117 bits (290), Expect = 2e-25
 Identities = 78/257 (30%), Positives = 139/257 (53%), Gaps = 22/257 (8%)

Query: 5   PEPILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIES 64
           PEP+++ R+L V +    G  +A+E V  D+ + +  A++G +GCGKS   R I ++ + 
Sbjct: 32  PEPVIRARDLDVFY----GSERALESVDIDIPEQQVTAIIGPSGCGKSTFLRCINRMNDR 87

Query: 65  -PGRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLY-TVGYQI 122
                ++G +      G+ V    +    +R+     +  +FQ+P+     +Y  V Y +
Sbjct: 88  IDAARIDGDLTLR---GTNVYDAAVDPVALRR----RVGMVFQEPNPFPKSIYDNVAYGL 140

Query: 123 AEAMEVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGISNN 182
            E  +V G    I E       + ++ L  + + ++++    LSGG +QR+ I   I+ +
Sbjct: 141 -EIQDVEGDHDEIVEQ-----SLRRAALWDEVSHQLDSSGVALSGGQQQRLCIARAIAPD 194

Query: 183 PRILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAV-MYAG 241
           P +L+ DEP +ALD    +Q+ DL+ ++ E+Y  TV+++THN+   A  +D+ AV +  G
Sbjct: 195 PEVLLMDEPASALDPVATSQVEDLIEELAEEY--TVVIVTHNMQQAARISDKTAVFLTGG 252

Query: 242 KIVEIGTVDQIFKNPLH 258
           K+VE G  DQIF+NP H
Sbjct: 253 KLVEFGDTDQIFENPEH 269


>emb|CAA10913.1| (AJ222649) sapF [Erwinia chrysanthemi]
           Length = 269
           
 Score =  115 bits (286), Expect = 6e-25
 Identities = 75/268 (27%), Positives = 142/268 (52%), Gaps = 27/268 (10%)

Query: 6   EPILQVRNLTVHFYTYAGI-----VKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQ 60
           E +L+ RNLT  F    G      V+A++ VSF + + +T A++GE G GKS  ++ ++ 
Sbjct: 3   ETLLEARNLTKTFRYRTGWFRRQHVQAVKSVSFTLRERQTLAIIGENGSGKSTLAKMLSG 62

Query: 61  LIE--SPGRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTV 118
           +I   S   +++   L Y D                  R   I    QD   SL+P   +
Sbjct: 63  VIPPTSGELVIDDHPLQYGD---------------YHYRSQRIRMSIQDSATSLNPRQRI 107

Query: 119 GYQIAEAMEVHGKIKSIKEGIQKAVDI-LKSVLIPDPARRVNNYPHELSGGMKQRVVIGI 177
           G  +   + ++  +   +   +KA+++ L+ V +   A     YPH L+ G KQR+ +  
Sbjct: 108 GQLLELPLRLNTDLTPQER--EKAINLALRQVGLR--ADHATYYPHALAPGQKQRIGLAR 163

Query: 178 GISNNPRILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAV 237
            +   P++++ADE   +LD+++++QI++L+ +++EK+  + I +T +LG++   +D++ V
Sbjct: 164 ALILQPKVIVADEVLASLDMSVRSQIINLMLELQEKHGISYIYVTQHLGMMKHISDQILV 223

Query: 238 MYAGKIVEIGTVDQIFKNPLHPYTQGLL 265
           M AG++VE G+   +   PLH  T+ L+
Sbjct: 224 MQAGEVVERGSTADVLAAPLHDLTKRLI 251


>emb|CAC00366.1| (AL160371) probable oligopeptide transport ATP-binding protein appf
           [Leishmania major]
           Length = 242
           
 Score =  114 bits (282), Expect = 2e-24
 Identities = 74/201 (36%), Positives = 111/201 (54%), Gaps = 21/201 (10%)

Query: 6   EPILQVRNLTVHFYTYAGI-------VKAIEKVSFDVYKGETFALVGETGCGKSVTSRAI 58
           +P++  R+L  HF    GI       V+A++ VSFDV KGET  +VGE+GCGKS T+R +
Sbjct: 13  QPLVIARDLVKHFPLKGGIPGRRAGAVRAVDGVSFDVLKGETLGVVGESGCGKSTTARLL 72

Query: 59  TQLIESPGRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTV 118
            QL         G++++   D   V   +L  +  R    +++  +FQD ++SL+P  T+
Sbjct: 73  MQLTAQD----SGELIF---DAEXVGSAQLPLKRYR----SQVQMVFQDSYSSLNPRLTI 121

Query: 119 GYQIAEAMEVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIG 178
              IA    VHG     +E I +A  +L  V + +P R    YPHELSGG +QRV I   
Sbjct: 122 EESIAFTARVHG--IPAREAIDRARHLLGRVGL-EPLRFGGRYPHELSGGQRQRVNIARA 178

Query: 179 ISNNPRILIADEPTTALDVTI 199
           +   PR++I DE  +ALD ++
Sbjct: 179 LVLRPRLVILDEAVSALDKSV 199


>dbj|BAB07815.1| (AB036417) CysA protein [Acetabularia acetabulum]
           Length = 357
           
 Score =  110 bits (273), Expect = 2e-23
 Identities = 72/254 (28%), Positives = 129/254 (50%), Gaps = 23/254 (9%)

Query: 3   KVPEPILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLI 62
           K P   ++++ +  H+ T  GI KA+  V  ++  GE  AL+G +G GK+   R +  L 
Sbjct: 2   KQPGFDVKLQGIVKHYKTRKGIFKAVNGVDLEINSGEIVALLGPSGSGKTTLLRVMAGLE 61

Query: 63  ESPGRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQI 122
           E    I EG++ Y  +D +   L              +I ++FQ    +L    TVG  I
Sbjct: 62  E----ITEGKIFYDGEDATDWSL-----------EDRQIGFVFQG--YALFKHLTVGDNI 104

Query: 123 AEAMEVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGISNN 182
           A    +      I++ +++ +D+++   +P    R   +P +LSGG +QR+ +   ++  
Sbjct: 105 AFGPRMKKMDIDIRKRVKELLDLVQ---LPGLESR---FPQQLSGGQRQRIALARALAYE 158

Query: 183 PRILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYAGK 242
           PR+L+ DEP  ALD  I+  + + L ++      T +++TH+     E ADRV V   G 
Sbjct: 159 PRLLLLDEPFGALDPEIREDLRNSLKRIISSLNLTSVMVTHDQEEAFEVADRVVVFNKGS 218

Query: 243 IVEIGTVDQIFKNP 256
           I ++G+++ I++NP
Sbjct: 219 IEQVGSLEDIYRNP 232


>sp|P31134|POTG_ECOLI PUTRESCINE TRANSPORT ATP-BINDING PROTEIN POTG
           >gi|321862|pir||B45313 putrescine transport protein potG
           - Escherichia coli >gi|147335|gb|AAA24410.1| (M93239)
           nucleotide binding protein [Escherichia coli]
           >gi|1651388|dbj|BAA35566.1| (D90723) Putrescine
           transport protein PotG. [Escherichia coli]
           >gi|1787079|gb|AAC73942.1| (AE000187) ATP-binding
           component of putrescine transport system [Escherichia
           coli K12]
           Length = 404
           
 Score =  109 bits (269), Expect = 6e-23
 Identities = 89/271 (32%), Positives = 144/271 (52%), Gaps = 34/271 (12%)

Query: 2   RKVPEPILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQL 61
           RK   P+L++RNLT    +Y G   A++ VS  +YKGE FAL+G +GCGKS   R +   
Sbjct: 40  RKALTPLLEIRNLTK---SYDG-QHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGF 95

Query: 62  IESPGRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQ 121
            E P     GQ++    DG  VDL ++    +R I       +FQ    +L P  TV   
Sbjct: 96  -EQPSA---GQIML---DG--VDLSQVPPY-LRPIN-----MMFQS--YALFPHMTVEQN 138

Query: 122 IAEAMEVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGISN 181
           IA  ++     K+  E   +  ++L  V + + A+R    PH+LSGG +QRV +   ++ 
Sbjct: 139 IAFGLKQDKLPKA--EIASRVNEMLGLVHMQEFAKRK---PHQLSGGQRQRVALARSLAK 193

Query: 182 NPRILIADEPTTALDVTI----QAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAV 237
            P++L+ DEP  ALD  +    Q +++D+L    E+   T +++TH+       A R+A+
Sbjct: 194 RPKLLLLDEPMGALDKKLRDRMQLEVVDIL----ERVGVTCVMVTHDQEEAMTMAGRIAI 249

Query: 238 MYAGKIVEIGTVDQIFKNPLHPYTQGLLRAV 268
           M  GK V+IG  ++I+++P   Y+   + +V
Sbjct: 250 MNRGKFVQIGEPEEIYEHPTTRYSAEFIGSV 280


>pir||B70127 phosphate ABC transporter, ATP-binding protein (pstB) homolog -
           Lyme disease spirochete >gi|2688112|gb|AAC66606.1|
           (AE001132) phosphate ABC transporter, ATP-binding
           protein (pstB) [Borrelia burgdorferi]
           Length = 260
           
 Score =  108 bits (268), Expect = 8e-23
 Identities = 78/260 (30%), Positives = 136/260 (52%), Gaps = 21/260 (8%)

Query: 6   EPILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIES- 64
           E I++  NL + FYT     KA+ K++  + K    AL+G +GCGKS   R + ++ +  
Sbjct: 11  EVIIETENLNL-FYTD---FKALNKINMKILKNSITALIGPSGCGKSTFLRTLNRMNDLV 66

Query: 65  PGRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQIAE 124
            G  +EG V+Y   +G  +        E+R+    +I  +FQ P+  L  +Y     I+ 
Sbjct: 67  EGIKIEGNVIY---EGKNIYSNNFDILELRR----KIGMVFQTPNPFLMSIYD---NISY 116

Query: 125 AMEVHGKI--KSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGISNN 182
             ++HG    K + E +++++   KS L  +   +++     LSGG +QR+ I   ++  
Sbjct: 117 GPKIHGTKDKKKLDEIVEQSLK--KSALWNEVKDKLHTNALSLSGGQQQRLCIARTLAIE 174

Query: 183 PRILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYAGK 242
           P +++ DEPT+ALD     +I +L+  +KE Y  T+I++THN+      +DR A    G 
Sbjct: 175 PNVILMDEPTSALDPISTGKIEELIINLKESY--TIIIVTHNMQQAGRISDRTAFFLNGC 232

Query: 243 IVEIGTVDQIFKNPLHPYTQ 262
           I E  + D++F NP +  T+
Sbjct: 233 IEEESSTDELFFNPKNTKTE 252


>pir||C75369 amino acid ABC transporter, ATP-binding protein - Deinococcus
           radiodurans (strain R1)
           >gi|6459415|gb|AAF11206.1|AE002008_1 (AE002008) amino
           acid ABC transporter, ATP-binding protein [Deinococcus
           radiodurans]
           Length = 265
           
 Score =  108 bits (266), Expect = 1e-22
 Identities = 83/269 (30%), Positives = 133/269 (48%), Gaps = 27/269 (10%)

Query: 2   RKVPEPILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQL 61
           R V EPI+  +N+  HF T+     A+  V+  V +GE   ++G +G GKS   R I  L
Sbjct: 19  RTVGEPIIVAQNVQKHFGTF----HALRGVNLTVRQGEVVVIIGPSGSGKSTFIRTINAL 74

Query: 62  IESPGRIVEGQVLYYRDDGSV-VDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGY 120
                           D GS+ VD L L           E+  +FQ    +L P  TV  
Sbjct: 75  DP-------------HDGGSITVDGLPLQGARNLDAIRREVGMVFQS--FNLFPHLTVLD 119

Query: 121 QIAEA-MEVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGI 179
            I  A   V G  K+  +   + +D+L+ V I + A +   +P +LSGG +QRV I   +
Sbjct: 120 NITLAPTRVRGVDKAQAQA--RGLDLLRRVGIEEQAYK---FPAQLSGGQQQRVAIARAL 174

Query: 180 SNNPRILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMY 239
           +  P+I++ DEPT+ALD  +  ++LD++ ++  +   T++++TH +G   E ADR+    
Sbjct: 175 AMEPKIMLFDEPTSALDPEMIKEVLDVMKEL-ARTGMTMLVVTHEMGFAREVADRILFFD 233

Query: 240 AGKIVEIGTVDQIFKNPLHPYTQGLLRAV 268
            G IVE  T +  ++NP H   +  L  +
Sbjct: 234 QGNIVEDTTPEAFYQNPQHERARQFLSKI 262


>gb|AAK41516.1| Oligo/dipeptide transport, ATP binding protein . carboxy-end
           fragment. (dppF-2) [Sulfolobus solfataricus]
           Length = 103
           
 Score =  106 bits (261), Expect = 5e-22
 Identities = 51/97 (52%), Positives = 64/97 (65%), Gaps = 1/97 (1%)

Query: 234 RVAVMYAGKIVEIGTVDQIFKNPLHPYTQGLLRAVPNPLTKIEKLEA-IPGTVPNLITPP 292
           R+ VMY GK+VEIGT +++   PLHPYTQ LL+AVP P   I   E  I G + + +  P
Sbjct: 7   RIGVMYLGKVVEIGTPEEVISEPLHPYTQALLQAVPVPDPDIGIKEPNIKGEIQSPLELP 66

Query: 293 GGCRFHPRCPKVMSICKEKVPELKEIEPGHFVACHLY 329
            GC F+ RCP    ICKEK PE+K I+  H+VACHLY
Sbjct: 67  KGCVFYSRCPFAKDICKEKPPEIKRIKGDHYVACHLY 103


>pir||A82184 ABC transporter, ATP-binding protein VC1568 [imported] - Vibrio
           cholerae (group O1 strain N16961)
           >gi|9656076|gb|AAF94722.1| (AE004234) ABC transporter,
           ATP-binding protein [Vibrio cholerae]
           Length = 233
           
 Score =  103 bits (255), Expect = 3e-21
 Identities = 75/242 (30%), Positives = 133/242 (53%), Gaps = 22/242 (9%)

Query: 5   PEPILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIE- 63
           P P+++++ +  H+ +   +VKA++ V   +  GE  A++G +G GKS     +  L + 
Sbjct: 6   PAPLVELQQICKHYTSGQNVVKALDGVDLTIRHGEFLAILGPSGSGKSTLMNVLGCLDKP 65

Query: 64  SPGRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPL-YTVGYQI 122
           + GR        Y+ DG  VD   LS +++  IR  +I ++FQ    S + L Y      
Sbjct: 66  TAGR--------YQLDGHPVD--SLSTQQLAAIRNQKIGFVFQ----SFNLLEYASALDN 111

Query: 123 AEAMEVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGISNN 182
                V+  +K+ K+  ++A ++L  V + D   R+++ P++LSGG KQRV I   + N 
Sbjct: 112 VALPLVYAGVKA-KDRRRRATELLTRVGLAD---RLDHKPNQLSGGQKQRVAIARALINQ 167

Query: 183 PRILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYAGK 242
           P+IL+ADEPT ALD    A+I  L N++  + + T+I++TH+   +A+   R+  +  G+
Sbjct: 168 PQILLADEPTGALDSKSGAEIEALFNELHREGR-TIIVVTHD-NELAKRTKRIVTIRDGQ 225

Query: 243 IV 244
           +V
Sbjct: 226 VV 227


>pir||H82377 ABC transporter, ATP-binding protein VCA1101 [imported] - Vibrio
           cholerae (group O1 strain N16961)
           >gi|9658548|gb|AAF96993.1| (AE004435) ABC transporter,
           ATP-binding protein [Vibrio cholerae]
           Length = 486
           
 Score =  103 bits (255), Expect = 3e-21
 Identities = 79/272 (29%), Positives = 130/272 (47%), Gaps = 33/272 (12%)

Query: 28  IEKVSFDVYKGETFALVGETGCGKSVTSRAITQLI----ESPGRI-VEGQVLYYRDDGSV 82
           +E +SF+++  +   ++GETG GKS+ + AI   +     S G+I + GQ  + R     
Sbjct: 46  VESLSFELHAHQALTILGETGSGKSLLANAIIGNLPAGLRSQGKIALFGQYQHQR----- 100

Query: 83  VDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQIAEA----MEVHGKIKSIKEG 138
                 ++ E   + G ++A + Q+P  +L+P+   G Q+AE     M  H    ++ + 
Sbjct: 101 ------TQAEREALWGKQLAVLPQEPWHALNPIMRAGEQVAEVHRLVMGNHAASAALTDS 154

Query: 139 IQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGISNNPRILIADEPTTALDVT 198
             + V + + +         + YPH+LSGGM QRV           +LIADEPT  LD +
Sbjct: 155 AFQQVALHQDL---------SKYPHQLSGGMAQRVAYLCATQTQAPLLIADEPTKGLDAS 205

Query: 199 IQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYAGKIVEIGTVDQIFKNPLH 258
            + QI+ LL    +  +  ++ ITH++ V  +    + VM  G I E G   Q+  +P  
Sbjct: 206 RRDQIIALL--QAQLTRGALLTITHDIEVAEKLGGTIIVMRKGVIQEQGPAQQVLSHPQS 263

Query: 259 PYTQGLLRAVPN--PLTKIEKLEAIPGTVPNL 288
            YT+ L+ A P   P T   K      TV N+
Sbjct: 264 DYTKALINADPRYWPTTPQSKTGEPLLTVDNI 295


 Score = 71.0 bits (171), Expect = 2e-11
 Identities = 58/234 (24%), Positives = 107/234 (44%), Gaps = 35/234 (14%)

Query: 3   KVPEPILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLI 62
           K  EP+L V N+ +H     G     + +SF +  GE   + G++GCGKS  +  +  L+
Sbjct: 284 KTGEPLLTVDNIAMH----RGEKCLFDSLSFTLSAGEILGISGDSGCGKSTLADLLLGLL 339

Query: 63  E-SPGRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQ 121
           + S GRI                        ++ I   +   ++QDP ++L    T+   
Sbjct: 340 KPSQGRI----------------------HRLQAIPLGKALKLYQDPPSALAKSVTLQTL 377

Query: 122 IAEAMEVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGISN 181
           + +    H   +S    + + + +  ++L    +R+ N    ++SGG  QR  I   +  
Sbjct: 378 LEDVCRQHSVERSQIPRLLERLALSPNLL----SRKAN----QVSGGELQRFAILRALLT 429

Query: 182 NPRILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRV 235
            P +L+ADEPT+ LD    A  L L+ ++ ++    ++LI+H+   + +T  RV
Sbjct: 430 RPTLLVADEPTSRLDPITAASTLQLIIELTQEIGCALVLISHDKLALEKTCHRV 483


>gb|AAC05643.1| (AF033673) unknown [Pseudomonas marginalis pv. alfalfae]
           Length = 254
           
 Score =  101 bits (250), Expect = 1e-20
 Identities = 85/268 (31%), Positives = 135/268 (49%), Gaps = 30/268 (11%)

Query: 5   PEPILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIE- 63
           PE I+Q++ +   +    G    ++ ++ +V +GE   L G +G GKS T R + +L E 
Sbjct: 11  PEGIIQMQGVNKWY----GQFHVLKDINLNVKQGERIVLCGPSGSGKSTTIRCLNRLEEH 66

Query: 64  SPGRIVEGQVLYYRDDGSVVDLLKLSEE--EIRKIRGNEIAYIFQDPHASLDPLYTVGYQ 121
             GRIV             VD ++L+ +  +I  IR  E+  +FQ  H +L P  T+   
Sbjct: 67  QQGRIV-------------VDGVELTNDLKQIEAIR-REVGMVFQ--HFNLFPHLTILQN 110

Query: 122 IAEA-MEVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGIS 180
              A M V    K   E I  A+  L+ V IP+ A +   +P +LSGG +QRV I   + 
Sbjct: 111 CTLAPMWVRKMPKRKAEEI--AMHYLERVRIPEQAHK---FPGQLSGGQQQRVAIARALC 165

Query: 181 NNPRILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYA 240
             P+I++ DEPT+ALD  +  ++LD +  + E    T++ +TH +G     A+RV  M  
Sbjct: 166 MKPKIMLFDEPTSALDPEMVKEVLDTMIGLAED-GMTMLCVTHEMGFARTVANRVIFMDK 224

Query: 241 GKIVEIGTVDQIFKNPLHPYTQGLLRAV 268
           G+IVE    +  F NP +  T+  L  +
Sbjct: 225 GEIVEQAAPNDFFDNPQNDRTKLFLSQI 252


>pir||T47012 hypothetical protein [imported] - Yersinia pestis
           >gi|4106600|emb|CAA21355.1| (AL031866) ORF32, len:, 236
           aa, hypothetical ABC transporter, similar to many, eg:
           E. coli YBBA_ECOLI (228 aa), 44.0% identity in 225 aa
           overlap, Fasta scores: opt: 611, E(): 0 [Yersinia
           pestis]
           Length = 237
           
 Score =  101 bits (248), Expect = 2e-20
 Identities = 78/241 (32%), Positives = 121/241 (49%), Gaps = 21/241 (8%)

Query: 5   PEPILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIES 64
           PE +      T H Y   G V A+E ++  + +GE  A++G +G GK+     +T L   
Sbjct: 10  PEHLADAVIETRHLYKRFGQVTALEDINIRINRGEFVAIMGASGSGKTTLMNILTCL--- 66

Query: 65  PGRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQIAE 124
              + EGQVL    DG  +D   L EE  R+ R ++I  +FQ  H  L P  T    I  
Sbjct: 67  -DTVSEGQVLL---DG--IDAAGLDEEGRRQFRADKIGLVFQQFH--LIPYLTALENIML 118

Query: 125 AMEVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGISNNPR 184
           A   H  +       + A  +L+ V +     R+ + P +LSGG +QRV I   + N P 
Sbjct: 119 AQHYHSVVDE-----EAARQVLEQVGMTP---RMGHLPSQLSGGEQQRVCIARALVNQPP 170

Query: 185 ILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYAGKIV 244
           I+ ADEPT  LD   + ++L+LLN +  + + T++++THN  +    ADRV  +  GK +
Sbjct: 171 IIFADEPTGNLDEENEQRVLELLNHIHRQGR-TIVMVTHNPDLSC-VADRVIRLQHGKYL 228

Query: 245 E 245
           +
Sbjct: 229 D 229


>gb|AAF64239.1|AF249736_3 (AF249736) ABC transporter [Pseudomonas putida]
           Length = 282
           
 Score =  100 bits (246), Expect = 3e-20
 Identities = 71/258 (27%), Positives = 126/258 (48%), Gaps = 32/258 (12%)

Query: 5   PEPILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIES 64
           P   ++VRN+   F    G   A+  VS D+  GE   L+G +GCGK+   R I  L   
Sbjct: 6   PGAQMKVRNIHKRF----GAFTALNDVSLDIAAGELVCLLGPSGCGKTTLLRCIAGLER- 60

Query: 65  PGRIVEGQVLYYRDDGSVVDLLKLSEEEIRKI--RGNEIAYIFQDPHASLDPLYTVGYQI 122
                       +D G+    L + E +I ++  +  +   +FQ    +L P  TV   I
Sbjct: 61  ------------QDRGT----LYIGERDISELPPQARDYGILFQS--YALFPNLTVEANI 102

Query: 123 AEAMEVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGISNN 182
           A  +   G+    ++  Q+  ++L+ V +    ++   YP +LSGG +QRV +   ++ +
Sbjct: 103 AYGLTGSGR----EQARQRVTEMLELVGLAGSEKK---YPGQLSGGQQQRVALARALAPS 155

Query: 183 PRILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYAGK 242
           P +L+ DEP +ALD  ++  +   L +++ +   T +++THN       ADR+AVM  G+
Sbjct: 156 PSLLLLDEPMSALDARVREHLCTELRQLQRQLGITTLMVTHNQDEAMLMADRIAVMNNGQ 215

Query: 243 IVEIGTVDQIFKNPLHPY 260
           + +  T  +I+  P  P+
Sbjct: 216 VEQYATPQEIYDQPATPF 233


>emb|CAC11998.1| (AL445065) ABC transporter related protein [Thermoplasma
           acidophilum]
           Length = 334
           
 Score = 99.8 bits (245), Expect = 4e-20
 Identities = 75/256 (29%), Positives = 133/256 (51%), Gaps = 32/256 (12%)

Query: 1   MRKVPEPILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQ 60
           M  +  PI++  NLT     Y G +KA++ ++ ++ + E + L+G+ G GK+ T + +T 
Sbjct: 1   MEAIRLPIIKTENLTK---IYPGGIKAVDGLNIEIEEAEIYGLLGKNGAGKTTTIKMLTT 57

Query: 61  LIE--SPGRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTV 118
            I+  S   I+ G            DL K  +E+IR+I    I  + QD     D     
Sbjct: 58  AIDPTSGNAIIGGY-----------DLRK-DKEKIRRI----IGVVPQDLTTDAD----- 96

Query: 119 GYQIAEAMEVHGKIKSI--KEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIG 176
             +  E + +     +I  +E  Q+  D+L+ V + D     N Y  + SGGM++R+ + 
Sbjct: 97  -LKGVENLRMIASFYNIPKQEAEQRIKDLLEIVDLSDWG---NKYVSQYSGGMRKRLELI 152

Query: 177 IGISNNPRILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVA 236
            G+ N+P+IL  DEPT  LDV  ++++   +  ++++   T+IL +H L  V + ADR++
Sbjct: 153 CGLVNSPKILFLDEPTLGLDVNTRSKMWKYIRDIQKELGVTIILTSHYLEEVDQLADRIS 212

Query: 237 VMYAGKIVEIGTVDQI 252
           ++  GKI+  GT D +
Sbjct: 213 IIDHGKILITGTPDSL 228


>pir||T34822 ABC-transporter ATP binding protein - Streptomyces coelicolor
           >gi|2815356|emb|CAA16479.1| (AL021530) ABC-transporter
           ATP binding protein [Streptomyces coelicolor A3(2)]
           Length = 230
           
 Score = 99.1 bits (243), Expect = 6e-20
 Identities = 74/245 (30%), Positives = 127/245 (51%), Gaps = 23/245 (9%)

Query: 4   VPEPILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIE 63
           V E +++V ++   +   +  V A+  VSFDV +GE  AL G +G GK+     +  L +
Sbjct: 5   VTETMVRVEDVRKSYGRDSAAVHALRGVSFDVPRGELIALKGRSGSGKTTLLNIVGGL-D 63

Query: 64  SP--GRI-VEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGY 120
           +P  GR+ V+G+           DL +L E+ +  +R + + ++FQ     L P+ T   
Sbjct: 64  TPDAGRVEVDGR-----------DLAELDEDGLLALRRDRVGFVFQS--FGLIPILTAAE 110

Query: 121 QIAEAMEVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGIS 180
            +   M +  +  + +E  ++   +L  V + D A +    P E+SGG +QRV I   ++
Sbjct: 111 NVGVPMRL--RRAAAREREERVELLLSLVGLADHAAQ---RPGEMSGGQQQRVAIARALA 165

Query: 181 NNPRILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYA 240
           NNP +LIADEPT  LD      +++LL  +    + T ++ TH+   + + ADRV  +  
Sbjct: 166 NNPALLIADEPTGQLDAETGHSVMELLRAVVRSEQVTALVATHD-ATLLDLADRVLELRD 224

Query: 241 GKIVE 245
           G+IVE
Sbjct: 225 GEIVE 229


>gi|10955070 agtA [Agrobacterium tumefaciens]
           >gi|6689864|gb|AAF23877.1|AF117204_2 (AF242881) agtA
           [Agrobacterium tumefaciens]
           Length = 359
           
 Score = 99.1 bits (243), Expect = 6e-20
 Identities = 74/252 (29%), Positives = 128/252 (50%), Gaps = 26/252 (10%)

Query: 5   PEPILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIES 64
           P P +  + +T  F    G V A++ VS D+ +GE FAL+G +G GK+ T   +    ++
Sbjct: 5   PLPAVSFQGVTRRF----GPVTAVDNVSLDISQGEFFALLGSSGSGKT-TLLTLLAGFDN 59

Query: 65  PGRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQIAE 124
           P    EGQVL        +  + +S+    K    +I  +FQ+   +L P  T    +A 
Sbjct: 60  PN---EGQVL--------MSGVSVSDVPPHK---RQIGVVFQN--YALFPHLTAAENVAY 103

Query: 125 AMEVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGISNNPR 184
            + + G  +  +E   KA   L ++     + R+  YP +LSGG +QRV +   +  +P 
Sbjct: 104 PLRMRGVARHEREERVKAALALVNL-----SDRLGAYPIQLSGGQQQRVALARALVFSPA 158

Query: 185 ILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYAGKIV 244
           IL+ DEP  ALD  ++ Q+   L +++ +   TVI +TH+       ADR+ +M AG+++
Sbjct: 159 ILLMDEPLGALDRRLRDQMQQELKRIQHELGITVIYVTHDQSEAMAMADRIGIMSAGRLL 218

Query: 245 EIGTVDQIFKNP 256
           ++   + I+  P
Sbjct: 219 QVADPEAIYAAP 230


>gb|AAF43494.1|AF130119_1 (AF130119) oligopeptide permease D [Mycoplasma bovis]
           Length = 156
           
 Score = 97.5 bits (239), Expect = 2e-19
 Identities = 55/128 (42%), Positives = 75/128 (57%), Gaps = 2/128 (1%)

Query: 201 AQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYAGKIVEIGTVDQIFKNPLHPY 260
           A +L L  +++++Y  ++ILI+HN+ VVA+  + + VMYAGKIVE GT   IF NP HPY
Sbjct: 1   ASVLALFEQIRQEYNISIILISHNISVVAKFCEYIYVMYAGKIVERGTRKDIFTNPAHPY 60

Query: 261 TQGLLRAVPNPLTKIEKLEAIPGTVPNLITPPGGCRFHPRCPKVMSICKEKVPELKEIEP 320
           T  L+ A+P      E+L +I GT P++   P G  F PR    + I  EK P L EI  
Sbjct: 61  TWALISAIPE--NDDERLFSIQGTPPDMANLPIGDPFAPRNDFALEIDYEKEPPLIEINS 118

Query: 321 GHFVACHL 328
            H  A  L
Sbjct: 119 HHKAATWL 126


>pir||A82932 ABC Transporter UU118 [imported] - Ureaplasma urealyticum
           >gi|6899075|gb|AAF30524.1|AE002112_5 (AE002112) ABC
           Transporter [Ureaplasma urealyticum]
           Length = 300
           
 Score = 97.1 bits (238), Expect = 2e-19
 Identities = 75/244 (30%), Positives = 125/244 (50%), Gaps = 23/244 (9%)

Query: 5   PEPILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIES 64
           P  I+++R++   F     I + ++ V+ D+ KGE   ++G +G GK+     ++ L   
Sbjct: 61  PNNIIELRDVKKIFTNGYLINETLKGVNLDIRKGEFVIILGPSGSGKTTLMNIMSGL--- 117

Query: 65  PGRIVEGQVLYYRDDGSVVD--LLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQI 122
             R  +G V        V D  L+ +++ ++   R   I ++FQ  +  L  L      +
Sbjct: 118 -DRATDGDV-------RVCDKQLINMNQNKLTDFRKEYIGFVFQQ-YGLLPTL-----SV 163

Query: 123 AEAMEVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGISNN 182
            E +E+   ++  K+   K  D LK+V + D A++   +PHELSGG +QRV I   ++ N
Sbjct: 164 EENVEIGADLQVDKKRRIKPQDALKAVGMLDYAKK---FPHELSGGQQQRVSIARALAKN 220

Query: 183 PRILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYAGK 242
           P IL  DEPT A+D T+   IL    K+ ++ K TVI++THN  + AE    V  +  G 
Sbjct: 221 PIILFGDEPTGAVDETMSKIILKEFVKVNQELKTTVIIVTHN-PIFAELGTLVIKVKDGN 279

Query: 243 IVEI 246
           I E+
Sbjct: 280 INEL 283


>pir||G83245 probable ATP-binding component of ABC transporter PA3212 [imported]
           - Pseudomonas aeruginosa (strain PAO1)
           >gi|9949332|gb|AAG06600.1|AE004744_15 (AE004744)
           probable ATP-binding component of ABC transporter
           [Pseudomonas aeruginosa]
           Length = 264
           
 Score = 95.2 bits (233), Expect = 1e-18
 Identities = 77/248 (31%), Positives = 118/248 (47%), Gaps = 19/248 (7%)

Query: 5   PEPILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIES 64
           P+ I+QVR+L   F    G     E +  DV +GE   +VG +G GKSV  R+I  L   
Sbjct: 6   PQAIIQVRDLCNRF----GAQAVHEHLDLDVRRGEILGVVGGSGTGKSVLLRSIVGL--- 58

Query: 65  PGRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQIAE 124
             R   G V  + +D     LL+L EE  R +       +FQ   A    L  V      
Sbjct: 59  -RRPTSGSVRVFGED-----LLQLPEER-RSLVERRFGVLFQQG-ALFSSLTVVENVALP 110

Query: 125 AMEVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGISNNPR 184
            +E  G  ++  E + +    +K  L   PA   + YP  LSGGM +R  +   ++ +P 
Sbjct: 111 LIENAGLPRADAEHLAQ----VKLALAGLPANAGDKYPASLSGGMIKRAALARALALDPD 166

Query: 185 ILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYAGKIV 244
           IL  DEPT  LD    A   +L+  +++    TV L+TH+L  +    DRVAV+   K++
Sbjct: 167 ILFLDEPTAGLDPIGAAAFDNLIRTLRDALGLTVFLVTHDLDTLYTICDRVAVLSQKKVL 226

Query: 245 EIGTVDQI 252
            + T++++
Sbjct: 227 VVDTLERV 234


>pir||S75652 ABC-type transport protein sll1878 - Synechocystis sp.  (strain PCC
           6803) >gi|1653298|dbj|BAA18213.1| (D90912) ABC
           transporter [Synechocystis sp.]
           Length = 368
           
 Score = 94.8 bits (232), Expect = 1e-18
 Identities = 71/254 (27%), Positives = 128/254 (49%), Gaps = 20/254 (7%)

Query: 4   VPEPILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIE 63
           + + +L V++L   F   +  V  ++K++F++  GE   L+G +GCGK+   R I    E
Sbjct: 14  IEDSVLTVQDLGKSFRGQSTPV--LQKINFNLAPGEILGLLGPSGCGKTTLLRIIAGF-E 70

Query: 64  SPGRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQIA 123
           +P     G V    D  S  + L   E+        +   +FQD   +L P  T+   IA
Sbjct: 71  TP---TSGTVHLEGDCVSGENGLTPPEQR-------QTGMVFQD--YALFPHLTITDNIA 118

Query: 124 EAMEVHGKIKSIKEGIQ-KAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGISNN 182
             +  H   K  ++ IQ +  ++L  V +    +R   YPHELSGG +QR+ +   ++  
Sbjct: 119 FGLR-HKSQKLNRQQIQGRVAEVLHLVGLTGLEKR---YPHELSGGQQQRIALARALAPK 174

Query: 183 PRILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYAGK 242
           P +++ DEP + LDV ++ ++   +  + +      I +TH+       +DR+ VMY G 
Sbjct: 175 PNLILLDEPLSNLDVQVRQRLRHEIRHILKATGTAAIFVTHDQEEAMAISDRIGVMYRGN 234

Query: 243 IVEIGTVDQIFKNP 256
           + +IGT ++I+++P
Sbjct: 235 LEQIGTPEEIYRSP 248


>pir||T10888 iron utilization protein C - Haemophilus influenzae
           >gi|619400|gb|AAB32112.1| (S72674) HitC=iron utilization
           protein [Haemophilus influenzae, type b, DL42, NTHI
           TN106, Peptide, 356 aa]
           Length = 356
           
 Score = 94.0 bits (230), Expect = 2e-18
 Identities = 67/261 (25%), Positives = 123/261 (46%), Gaps = 30/261 (11%)

Query: 2   RKVPEPILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQL 61
           + +  P+L V+NL   F       + +  +SF + +GE   L+G +GCGK+   RAI   
Sbjct: 5   KMINNPLLTVKNLNKFFNEQ----QVLHDISFSLQRGEILFLLGASGCGKTTLLRAIAGF 60

Query: 62  IESPGRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQD----PHASLDPLYT 117
            E P     G++        + + L   E      +   + Y+ Q+    PH  L+    
Sbjct: 61  -EQPSN---GEIW-------LKERLIFGENFNLPTQQRHLGYVVQEGILFPH--LNVYRN 107

Query: 118 VGYQIAEAMEVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGI 177
           + Y +      + + K+  E I +   I +           + +PH+LSGG +QRV +  
Sbjct: 108 IAYGLGNGKGKNSEEKTRIEQIMQLTGIFELA---------DRFPHQLSGGQQQRVALAR 158

Query: 178 GISNNPRILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAV 237
            ++ NP +++ DEP +ALD  ++ QI   + +   +  A+ I +TH+       AD++A+
Sbjct: 159 ALAPNPELILLDEPFSALDEHLRQQIRQEMLQALRQSGASAIFVTHDRDEALRYADKIAI 218

Query: 238 MYAGKIVEIGTVDQIFKNPLH 258
           +  GKI++I T   ++ +P H
Sbjct: 219 IQQGKILQIDTPRTLYWSPNH 239


>sp|P44513|HITC_HAEIN IRON(III)-TRANSPORT ATP-BINDING PROTEIN HITC
           >gi|1075080|pir||E64048 nucleotide-binding protein sfuC
           homolog - Haemophilus influenzae (strain Rd KW20)
           Length = 356
           
 Score = 93.6 bits (229), Expect = 3e-18
 Identities = 67/261 (25%), Positives = 123/261 (46%), Gaps = 30/261 (11%)

Query: 2   RKVPEPILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQL 61
           + +  P+L V+NL   F       + +  +SF + +GE   L+G +GCGK+   RAI   
Sbjct: 5   KMINNPLLTVKNLNKFFNEQ----QVLHDISFSLQRGEILFLLGSSGCGKTTLLRAIAGF 60

Query: 62  IESPGRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQD----PHASLDPLYT 117
            E P     G++        + + L   E      +   + Y+ Q+    PH  L+    
Sbjct: 61  -EQPSN---GEIW-------LKERLIFGENFNLPTQQRHLGYVVQEGVLFPH--LNVYRN 107

Query: 118 VGYQIAEAMEVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGI 177
           + Y +      + + K+  E I +   I +           + +PH+LSGG +QRV +  
Sbjct: 108 IAYGLGNGKGKNSEEKTRIEQIMQLTGIFELA---------DRFPHQLSGGQQQRVALAR 158

Query: 178 GISNNPRILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAV 237
            ++ NP +++ DEP +ALD  ++ QI   + +   +  A+ I +TH+       AD++A+
Sbjct: 159 ALAPNPELILLDEPFSALDEHLRQQIRQEMLQALRQSGASAIFVTHDRDESLRYADKIAI 218

Query: 238 MYAGKIVEIGTVDQIFKNPLH 258
           +  GKI++I T   ++ +P H
Sbjct: 219 IQQGKILQIDTPRTLYWSPNH 239


>pir||A64455 methyl coenzyme M reductase (EC 1.8.-.-) component A2 -
           Methanococcus jannaschii >gi|1592327|gb|AAB99247.1|
           (U67565) methyl coenzyme M reductase system, component
           A2 (atwA) [Methanococcus jannaschii]
           Length = 539
           
 Score = 93.6 bits (229), Expect = 3e-18
 Identities = 65/254 (25%), Positives = 132/254 (51%), Gaps = 16/254 (6%)

Query: 3   KVPEPILQVRNLTVHFYTYA-GIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQL 61
           ++ E I+++ N++ H+ +   G++KA++ V+ ++ + E F LVG +G GK+  ++ I  +
Sbjct: 282 EIKEDIIKLENVSKHYCSVERGVIKAVDNVTLNIREREIFGLVGTSGAGKTTLAKIIAGV 341

Query: 62  IE-SPGRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGY 120
           +  S G+       ++R     VD+ K       + +   I  +FQ+   +L P  T+  
Sbjct: 342 LPPSKGKY------WFRVGDEWVDMTKPGPMGRGRAK-RYIGILFQE--YALYPHRTILE 392

Query: 121 QIAEAMEVHGKIKSIKEGIQKAVDILKSVLIPDPARR--VNNYPHELSGGMKQRVVIGIG 178
            + EA+ +    +  +    KAV  L SV   +      ++ YPHELS G + R  +   
Sbjct: 393 NLTEAIGLELPDEFAR---MKAVYTLVSVGFSEEEAEEILDKYPHELSVGERHRCALAQV 449

Query: 179 ISNNPRILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVM 238
           +   PR++I DEPT  +D   +  + + ++K + + + T I+++H++  V    DR  +M
Sbjct: 450 LIKEPRVVILDEPTGTMDPITRNTVAESIHKSRIELEQTYIIVSHDMDFVLNVCDRAGLM 509

Query: 239 YAGKIVEIGTVDQI 252
             GK++++G  ++I
Sbjct: 510 RNGKLIKVGKPEEI 523


 Score = 85.8 bits (209), Expect = 6e-16
 Identities = 73/264 (27%), Positives = 132/264 (49%), Gaps = 27/264 (10%)

Query: 8   ILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIESPGR 67
           +L+V+N+T  F    G    ++ +SF + +GE+  ++G++G GKSV    +  +      
Sbjct: 8   LLEVKNVTKKF----GDKVVLKNISFTLEEGESLGILGKSGAGKSVLLHMLRGM--DGYE 61

Query: 68  IVEGQVLY---YRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQIAE 124
             EGQ++Y   Y +    VD+   +    +K  GNE+  I  D        Y +  +IA 
Sbjct: 62  PTEGQIIYHVSYCEKCGYVDVPSKAGTPCKKC-GNELKKIEVDFWNDKKYTYNLKRKIAI 120

Query: 125 AME----VHGKIKSIKEGI-----------QKAVDI-LKSVLIPDPARRVNNYPHELSGG 168
            ++    ++G+ K++ E I           ++A+D+ LK + +     R+ +   +LSGG
Sbjct: 121 MLQRTFALYGE-KTVLENILEALHQAGYEGKEAIDMALKLIKMVKLEHRITHIARDLSGG 179

Query: 169 MKQRVVIGIGISNNPRILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVV 228
            KQRVV+   I+  P I +ADEPT  LD      +   L ++  K K ++IL +H   V+
Sbjct: 180 EKQRVVLARQIAKEPFIFLADEPTGTLDPQTAKLVHSALKELVIKNKISLILTSHWPEVI 239

Query: 229 AETADRVAVMYAGKIVEIGTVDQI 252
           AE  ++   +  G+I+  GT +++
Sbjct: 240 AELTEKAIWLDKGEIIMEGTSEEV 263


>gb|AAC21775.1| (U32695) iron(III) ABC transporter, ATP-binding protein (hitC)
           [Haemophilus influenzae Rd]
           Length = 351
           
 Score = 93.2 bits (228), Expect = 4e-18
 Identities = 67/259 (25%), Positives = 122/259 (46%), Gaps = 30/259 (11%)

Query: 4   VPEPILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIE 63
           +  P+L V+NL   F       + +  +SF + +GE   L+G +GCGK+   RAI    E
Sbjct: 2   INNPLLTVKNLNKFFNEQ----QVLHDISFSLQRGEILFLLGSSGCGKTTLLRAIAGF-E 56

Query: 64  SPGRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQD----PHASLDPLYTVG 119
            P     G++        + + L   E      +   + Y+ Q+    PH  L+    + 
Sbjct: 57  QPSN---GEIW-------LKERLIFGENFNLPTQQRHLGYVVQEGVLFPH--LNVYRNIA 104

Query: 120 YQIAEAMEVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGI 179
           Y +      + + K+  E I +   I +           + +PH+LSGG +QRV +   +
Sbjct: 105 YGLGNGKGKNSEEKTRIEQIMQLTGIFELA---------DRFPHQLSGGQQQRVALARAL 155

Query: 180 SNNPRILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMY 239
           + NP +++ DEP +ALD  ++ QI   + +   +  A+ I +TH+       AD++A++ 
Sbjct: 156 APNPELILLDEPFSALDEHLRQQIRQEMLQALRQSGASAIFVTHDRDESLRYADKIAIIQ 215

Query: 240 AGKIVEIGTVDQIFKNPLH 258
            GKI++I T   ++ +P H
Sbjct: 216 QGKILQIDTPRTLYWSPNH 234


>emb|CAC10293.1| (AL442629) putative ABC transport system ATP binding protein
           [Streptomyces coelicolor]
           Length = 264
           
 Score = 92.8 bits (227), Expect = 5e-18
 Identities = 73/252 (28%), Positives = 125/252 (48%), Gaps = 24/252 (9%)

Query: 5   PEPILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIE- 63
           P   +++R +   +   AG V A+  +   + +G   A++G +G GKS   +    L   
Sbjct: 12  PGLAVELRGVQRRYGRGAGTVHALAGIDLALPRGTFTAVMGPSGSGKSTFLQCAAGLDRP 71

Query: 64  SPGRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQIA 123
           S G +  G            ++  ++E E+ ++R + + ++FQ    +L P  TV   + 
Sbjct: 72  SAGSVRLGGT----------EITGMNENELTELRRSRLGFVFQA--FNLLPSLTVEQNVL 119

Query: 124 EAMEVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGISNNP 183
             M + G+    ++  ++A D+L  V + D ARR    P ELSGG +QRV +   +   P
Sbjct: 120 LPMRLAGQ----RQDHRRAADVLAQVGLADKARR---RPGELSGGQQQRVAVARALVTAP 172

Query: 184 RILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYAGKI 243
            ++ ADEPT ALD    A++L LL +  +   ATV+++TH+    A  ADRV  +  G  
Sbjct: 173 DVIFADEPTGALDTGTAAEVLGLLRQAVDGLGATVVMVTHD-PAAAAWADRVLFLADGAF 231

Query: 244 ---VEIGTVDQI 252
              +E G+ +QI
Sbjct: 232 ADHLERGSAEQI 243


>gb|AAC24216.1| (AF055482) ABC transporter [Thermotoga neapolitana]
           Length = 138
           
 Score = 92.4 bits (226), Expect = 6e-18
 Identities = 51/139 (36%), Positives = 85/139 (60%), Gaps = 8/139 (5%)

Query: 195 LDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYAGKIVEIGTVDQIFK 254
           +D +++  I++L  +++++   +VI ITH+L      +DR+A+M+ G IVE+G+V+++  
Sbjct: 2   VDASLRMSIVNLFAQLRDQLGVSVIYITHDLATAYYVSDRIAIMFRGDIVEMGSVERVLT 61

Query: 255 NPLHPYTQGLLRAVPNPLTKIEKLEAIPGTVPNLITPP---GGCRFHPRCPKVMSICKEK 311
           +P HPYT+ L  ++P P  + +  E I  T+ +         GC+F  RCP+VMSIC+E+
Sbjct: 62  DPKHPYTRLLRESIPEPDPEKKWKEEI--TIADTEYEEYLRKGCKFAGRCPEVMSICREE 119

Query: 312 VPELKEIEPG-HFVACHLY 329
            P   EI  G   V CHLY
Sbjct: 120 KP--PEIMVGDSMVRCHLY 136


>pir||B82185 glycerol-3-phosphate ABC transporter, ATP-binding protein VC1552
           [imported] - Vibrio cholerae (group O1 strain N16961)
           >gi|9656059|gb|AAF94706.1| (AE004233)
           glycerol-3-phosphate ABC transporter, ATP-binding
           protein [Vibrio cholerae]
           Length = 393
           
 Score = 88.2 bits (215), Expect = 1e-16
 Identities = 75/265 (28%), Positives = 125/265 (46%), Gaps = 28/265 (10%)

Query: 3   KVPEPI-LQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQL 61
           K  EP+ L ++ L     TY    +A++ V   +++GE   LVG +GCGKS   R+I  L
Sbjct: 16  KHAEPVMLDIKQLVK---TYDNGHQAVKGVDLSIHQGEFIVLVGPSGCGKSSILRSIAGL 72

Query: 62  IESPGRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQ 121
            ES   I  G++      G  VD  K +  +I  +  N   Y    PH S      V   
Sbjct: 73  -ES---ITSGEIHLA---GRRVDNEKPANRDIAMVFQNYALY----PHMS------VYDN 115

Query: 122 IAEAMEVHGKIK-SIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGIS 180
           +A  ++  G  K +I   I K    LK          ++  P +LSGG +QRV +G  I 
Sbjct: 116 LAYGLKNRGVDKQTIAAKIAKVAKTLKI------EEYLDRKPAKLSGGQRQRVAMGRAIV 169

Query: 181 NNPRILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYA 240
            +P++ + DEP + LD  ++A +   + K++ +   T + +TH+       ADR+ V+  
Sbjct: 170 RDPQLFLFDEPLSNLDAALRAHMRLEIKKLQRELGVTSVYVTHDQVEAMTLADRIVVVKQ 229

Query: 241 GKIVEIGTVDQIFKNPLHPYTQGLL 265
           G+I ++GT  +++  P   +    +
Sbjct: 230 GEIEQVGTPAEVYHQPASTFVASFI 254


>sp|P15361|P29_MYCHR PROBABLE ABC TRANSPORTER ATP-BINDING PROTEIN P29
           >gi|80893|pir||S01829 hypothetical protein p29 -
           Mycoplasma hyorhinis >gi|150175|gb|AAA25428.1| (M37339)
           protein 29 [Mycoplasma hyorhinis]
           Length = 252
           
 Score = 87.4 bits (213), Expect = 2e-16
 Identities = 71/270 (26%), Positives = 135/270 (49%), Gaps = 37/270 (13%)

Query: 3   KVPEPILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLI 62
           K P   L+++NLT        I+  ++ ++ D+   +   L+G +G GKS   + I +  
Sbjct: 2   KKPLNKLEIKNLTFKNKNDDYII--LKNLNLDINSDKVLFLLGSSGQGKSSLLKTILKQT 59

Query: 63  ESPGRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQI 122
           +    ++EG +L+ + D     + +L+++E +     E++++ Q   +   P  TV   I
Sbjct: 60  D----VIEGTILFNKQD-----IFQLNKKEWKSFL-KEVSFLNQTTTSI--PFETVFTNI 107

Query: 123 AEAMEVHGKI---------KSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRV 173
             +++ +  +         KS KE I     +LK + I D   ++ +    LSGG +QRV
Sbjct: 108 VRSLQDYKNLFYNIFNLVSKSQKEEI---TSVLKELNILD---KIYHRVDSLSGGQQQRV 161

Query: 174 VIGIGISNNPRILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETAD 233
            I   +   P+I+IADEPT  LD  I   I++L+ KM +K+ + +I++THN+ ++ E   
Sbjct: 162 EIAKLMMQKPKIIIADEPTNFLDPNISKNIIELIIKMAKKFNSILIIVTHNVNLIHEFDS 221

Query: 234 RVAVM--------YAGKIVEIGTVDQIFKN 255
            + ++         + K +    +DQ+FKN
Sbjct: 222 SILLIKNQEYHFYKSNKEINSNILDQVFKN 251


>pir||T35450 ABC transporter ATP binding protein - Streptomyces coelicolor
           >gi|3319738|emb|CAA19904.1| (AL031035) ABC transporter
           ATP binding protein [Streptomyces coelicolor A3(2)]
           Length = 348
           
 Score = 87.4 bits (213), Expect = 2e-16
 Identities = 81/308 (26%), Positives = 134/308 (43%), Gaps = 38/308 (12%)

Query: 4   VPEPILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIE 63
           +P  +L +   TV F    G    ++ V   V + E   ++G +G GKS   RA+  L  
Sbjct: 1   MPPSLLSLEGATVRF----GGRAVLDDVGLGVAEHEVVCVLGPSGSGKSTLLRAVAGLQP 56

Query: 64  SPGRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQIA 123
               +  G+V     D S V   K            E+  +FQD    L P   V   IA
Sbjct: 57  ----LDAGRVTLDGRDQSGVPAHK-----------REVGLMFQDHQ--LFPQRDVAGNIA 99

Query: 124 EAMEVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGISNNP 183
               + G  ++ ++   +  ++L+ V +P  ARR       LSGG +QRV +   ++  P
Sbjct: 100 FGPRMRGASRAEQQA--RVAELLQLVGLPGAARRS---VAALSGGEQQRVALARALAPRP 154

Query: 184 RILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYAGKI 243
           R+L+ DEP   LD +++ +++  L ++  +   TV+ +TH+ G     ADRV VM  G+I
Sbjct: 155 RLLMLDEPLGQLDRSLRERLVVELRELFGRLGTTVLAVTHDQGEAFALADRVVVMRDGRI 214

Query: 244 VEIGTVDQIFKNPLHPYTQGLL------------RAVPNPLTKIEKLEAIPGTVPNLITP 291
            + GT  ++++ P   +    L            +A   P  K+   E  P     ++  
Sbjct: 215 AQSGTPLEVWQRPADAFVARFLGFENVAEASVAGQAADTPWGKVPVPEDAPQGTRTVLVR 274

Query: 292 PGGCRFHP 299
           P G R  P
Sbjct: 275 PAGVRVVP 282


>emb|CAB61861.1| (AL133252) putative ABC-transporter ATP binding protein
           [Streptomyces coelicolor A3(2)]
           Length = 354
           
 Score = 87.4 bits (213), Expect = 2e-16
 Identities = 72/259 (27%), Positives = 125/259 (47%), Gaps = 30/259 (11%)

Query: 1   MRKVPEPILQVRNLTVHFYTYAGIVKAI-EKVSFDVYKGETFALVGETGCGKSVTSRAIT 59
           +   P P L++  +TV   TY G  + + + +  DV  G   AL+G +GCGK+ T +  +
Sbjct: 4   LSSTPAPGLRLEQITV---TYPGHREPVLDGLDLDVADGRLLALLGPSGCGKTTTVQVAS 60

Query: 60  QLIESPGRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNE--IAYIFQDPHASLDPLYT 117
            L+ +PGR            G+V     L   E+ ++       A +FQ P   L P  T
Sbjct: 61  GLL-TPGR------------GAV----HLRGTEVTRVPPEHRGAAVVFQQP--MLLPHRT 101

Query: 118 VGYQIAEAMEVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGI 177
               +A    + G+  S ++    A+  L+ V +   A R   YP +LSGG  QRV +  
Sbjct: 102 ALDNVAFPARMRGR--SRRDARTSALAHLERVGLGALAAR---YPRQLSGGQAQRVALAR 156

Query: 178 GISNNPRILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAV 237
            ++  P +L+ DEP +ALD +++  + DLL  ++ +   T +L+TH+    A  AD +A+
Sbjct: 157 ALAAEPAVLLLDEPFSALDPSLRHTMRDLLTTVQRELAVTTVLVTHDQTEAASVADTIAL 216

Query: 238 MYAGKIVEIGTVDQIFKNP 256
           +  G +++      ++  P
Sbjct: 217 LDRGGLLQQAQPADLYARP 235


>gb|AAA16186.1| (L07065) P-glycoprotein/multidrug resistance protein [Drosophila
           melanogaster]
           Length = 1283
           
 Score = 87.0 bits (212), Expect = 3e-16
 Identities = 72/254 (28%), Positives = 122/254 (47%), Gaps = 21/254 (8%)

Query: 3   KVPEPILQVRNLTVHF-YTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQL 61
           KV EP+  +    V F Y     V  + K++  +++G+T ALVG +GCGKS   + + + 
Sbjct: 392 KVNEPLTTIEFKEVEFQYPTRPEVSILNKLNLKIHRGQTVALVGPSGCGKSTCIQLVQRF 451

Query: 62  IESPGRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLY-TVGY 120
            +       G +L+   +G+      L + +I  +R   I  + Q+P      +Y  + Y
Sbjct: 452 YDPQA----GNLLF---NGT-----NLKDLDINWLRFLRIGVVGQEPILFATSIYENIRY 499

Query: 121 QIAEAMEVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGIS 180
              +A     +I++ +     A+ I K     D    V     +LSGG KQR+ I   + 
Sbjct: 500 GREDA--TREEIEAARAAANAAIFIKKLPKGYDTL--VGERGAQLSGGQKQRIAIRRALI 555

Query: 181 NNPRILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYA 240
            +P IL+ DE T+ALD   +A++   L K+      T I++ H L  V   ADR+ V+  
Sbjct: 556 RDPEILLLDEATSALDTASEAKVQAALEKVSA--GRTTIIVAHRLSTV-RRADRIVVINK 612

Query: 241 GKIVEIGTVDQIFK 254
           G++VE GT  ++ +
Sbjct: 613 GEVVESGTHQELME 626


>pir||A47377 multidrug resistance protein Mdr50 - fruit fly (Drosophila
           melanogaster)
           Length = 1283
           
 Score = 87.0 bits (212), Expect = 3e-16
 Identities = 72/254 (28%), Positives = 122/254 (47%), Gaps = 21/254 (8%)

Query: 3   KVPEPILQVRNLTVHF-YTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQL 61
           KV EP+  +    V F Y     V  + K++  +++G+T ALVG +GCGKS   + + + 
Sbjct: 392 KVNEPLTTIEFKEVEFQYPTRPEVSILNKLNLKIHRGQTVALVGPSGCGKSTCIQLVQRF 451

Query: 62  IESPGRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLY-TVGY 120
            +       G +L+   +G+      L + +I  +R   I  + Q+P      +Y  + Y
Sbjct: 452 YDPQA----GNLLF---NGT-----NLKDLDINWLRFLRIGVVGQEPILFATSIYENIRY 499

Query: 121 QIAEAMEVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGIS 180
              +A     +I++ +     A+ I K     D    V     +LSGG KQR+ I   + 
Sbjct: 500 GREDA--TREEIEAARAAANAAIFIKKLPKGYDTL--VGERGAQLSGGQKQRIAIRRALI 555

Query: 181 NNPRILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYA 240
            +P IL+ DE T+ALD   +A++   L K+      T I++ H L  V   ADR+ V+  
Sbjct: 556 RDPEILLLDEATSALDTASEAKVQAALEKVSA--GRTTIIVAHRLSTV-RRADRIVVINK 612

Query: 241 GKIVEIGTVDQIFK 254
           G++VE GT  ++ +
Sbjct: 613 GEVVESGTHQELME 626


>gi|10955064 motB [Agrobacterium tumefaciens] >gi|3064078|gb|AAC18650.1|
           (AF242881) motB [Agrobacterium tumefaciens]
           Length = 394
           
 Score = 86.6 bits (211), Expect = 4e-16
 Identities = 75/268 (27%), Positives = 130/268 (47%), Gaps = 40/268 (14%)

Query: 1   MRKVPEPILQVRNLTVHFYTYAGI------VKAIEKVSFDVYKGETFALVGETGCGKSVT 54
           M+  PEP +     +    + AG+      VK +  ++  +  GE   L+G +G GK+  
Sbjct: 26  MQNQPEPAINKLQPSSLPISIAGVTKSYGPVKVLSDINLHIRSGEFMTLLGPSGSGKTTL 85

Query: 55  SRAITQLIESPGRIVEGQVLYYRDDGSVVDLLKLSEEEI----RKIRGNEIAYIFQDPHA 110
              +   I               D GS    LK  EEE+      +RG  +  +FQ+   
Sbjct: 86  LMTLAGFIRP-------------DFGS----LKFGEEEVILRAPHLRG--VGMMFQN--Y 124

Query: 111 SLDPLYTVGYQIAEAMEVHGKIK-SIKEGIQKAVDILKSVLIPD-PARRVNNYPHELSGG 168
           +L P  +V   IA  +++ G+ + +IK  ++   D+L++V +    +RR++    ELSGG
Sbjct: 125 ALFPHMSVEANIAYPLKIRGEDRETIKARVR---DVLETVQLGGYGSRRIS----ELSGG 177

Query: 169 MKQRVVIGIGISNNPRILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVV 228
            +QR+ +   I   P+IL+ DEP +ALD  ++  +   L  M E+   T +L+TH+    
Sbjct: 178 QRQRIALARAIVFKPKILLMDEPLSALDKNLRELMQLELRTMHEQLGMTTVLVTHDQREA 237

Query: 229 AETADRVAVMYAGKIVEIGTVDQIFKNP 256
              +DR+AV+  GKI +I T + ++  P
Sbjct: 238 LTMSDRIAVLRNGKIAQIDTSETLYSEP 265


>gb|AAD53162.1|AF176824_5 (AF176824) ATP-binding protein of ABC transporter SrpK
           [Synechococcus PCC7942]
           Length = 270
           
 Score = 86.6 bits (211), Expect = 4e-16
 Identities = 68/239 (28%), Positives = 114/239 (47%), Gaps = 24/239 (10%)

Query: 2   RKVPEPILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQL 61
           R   + ILQ R+LT H+ +    V A + ++  ++ GE   L+G +GCGKS    ++ Q 
Sbjct: 13  RSPTDVILQARSLTKHYRSGNHNVTAFKDLTLSLHPGEIVCLLGPSGCGKS----SLLQA 68

Query: 62  IESPGRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQ 121
           I S   I  G++ +            L +   R      I ++FQ+P  +L P  TV   
Sbjct: 69  IASLEPIDAGEIQFLGQP--------LQQPHPR------IGFVFQEP--ALLPWQTVWQN 112

Query: 122 IAEAMEV-HGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGIS 180
           ++  +E+  G   S  +   +  D L  V +    R    YP +LSGGM QRV +   ++
Sbjct: 113 VSFGLELKQGPQLSEAQRRSRISDALNRVGLAGAERA---YPRQLSGGMAQRVALARALA 169

Query: 181 NNPRILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMY 239
            +P +L+ DEP  ALD   + ++  LL +        V+++TH+L       DR+ +M+
Sbjct: 170 RHPHLLLLDEPFAALDAIHRLEMQKLLLEAIAGQTEAVLMVTHDLDEALLLGDRIILMH 228


>gb|AAB51510.1| (U91632) sugar transporter [Agrobacterium tumefaciens]
           Length = 512
           
 Score = 85.8 bits (209), Expect = 6e-16
 Identities = 70/239 (29%), Positives = 123/239 (51%), Gaps = 21/239 (8%)

Query: 8   ILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIESPGR 67
           IL++RN+T    T+ G VKA+E V+  V +GE  ALVGE G GKS   + ++ +   P  
Sbjct: 5   ILEMRNITK---TFPG-VKALENVNLKVKEGEIHALVGENGAGKSTLMKVLSGVY--PAG 58

Query: 68  IVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQIAEAME 127
             EG++ Y   +G+V +   +++ E       +I  I      +L PL ++   I    E
Sbjct: 59  TYEGEIHY---EGAVRNFRAINDSE-------DIGIIIIHQELALVPLLSIAENIFLGNE 108

Query: 128 VHGK-IKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGISNNPRIL 186
           V    + S ++   +  ++LK V + +    +     ++  G +Q V I   +S + ++L
Sbjct: 109 VASNGVISWQQTFNRTRELLKKVGLKESPETLIT---DIGVGKQQLVEIAKALSKSVKLL 165

Query: 187 IADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYAGKIVE 245
           I DEPT +L+ +    +L+LL + + +   T I+ITH L  V + AD++ V+  G  V+
Sbjct: 166 ILDEPTASLNESDSEALLNLLMEFRNQ-GMTSIIITHKLNEVRKVADQITVLRDGMTVK 223


 Score = 71.0 bits (171), Expect = 2e-11
 Identities = 69/256 (26%), Positives = 117/256 (44%), Gaps = 34/256 (13%)

Query: 2   RKVP--EPILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAIT 59
           R VP  E IL+V+N   +   +    + +  ++  V KGE   + G  G G+  T  A++
Sbjct: 253 RDVPIGETILEVKNWNAYHQQHRDR-QVLHDINVTVRKGEVVGIAGLMGAGR--TEFAMS 309

Query: 60  QLIESPGRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQD-PHASLDPLYTV 118
              +S G  + G VL    DG  VD+       +RK     +AY+ +D  H  L      
Sbjct: 310 VFGKSYGHRITGDVLI---DGKPVDV-----STVRKAIDAGLAYVTEDRKHLGL------ 355

Query: 119 GYQIAEAMEVHGKIKSIKEGIQKA--VDILKSVLIPDPARR--------VNNYPHELSGG 168
              +     +H    +   G+ KA  +D +K + +    R         +      LSGG
Sbjct: 356 ---VLNDNILHNTTLANLAGVSKASIIDDIKEMKVASDFRTRLRIRSSGIFQETVNLSGG 412

Query: 169 MKQRVVIGIGISNNPRILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVV 228
            +Q+VV+   + +NP +LI DEPT  +DV  + +I  ++N++    K  V++I+  +  +
Sbjct: 413 NQQKVVLSKWLFSNPDVLILDEPTRGIDVGAKYEIYTIINQLAADGKG-VLMISSEMPEL 471

Query: 229 AETADRVAVMYAGKIV 244
               DR+ VM  G+IV
Sbjct: 472 LGNCDRIYVMNEGRIV 487


>gb|AAD02045.1| (AF035964) ATP-binding protein B [Brucella abortus]
           Length = 621
           
 Score = 85.4 bits (208), Expect = 8e-16
 Identities = 76/247 (30%), Positives = 119/247 (47%), Gaps = 19/247 (7%)

Query: 3   KVPEPILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLI 62
           KV E  +++R++T H+   AG+   ++ ++  V  GE   LVG +G GKS     I +L 
Sbjct: 364 KVTEAGIEIRHVTFHYGKGAGV---LDNINLTVRGGERVGLVGHSGAGKSTLINLILRLY 420

Query: 63  ESPGRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASL-DPLYTVGYQ 121
           +    + +G +L   D   + D+ + S  +   +   E A +    H SL D +      
Sbjct: 421 D----VEQGAILV--DGQDIRDVTQASLRKAFAVVSQETALL----HRSLRDNIMLARDD 470

Query: 122 IAEAMEVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGISN 181
             EA  V    ++  +G    ++  +     D    V     +LSGG +QR+ I   I  
Sbjct: 471 ATEAELVQAAQQAEADGFIANLEDFQGRRSFDAF--VGERGVKLSGGQRQRIAIARAILK 528

Query: 182 NPRILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYAG 241
           +  ILI DE T+ALD  ++A I + L ++ E    TVI I H L  +A T DR+ VM  G
Sbjct: 529 DAPILILDEATSALDSQVEASIQENLKQLME--GKTVIAIAHRLSTIA-TLDRLVVMDGG 585

Query: 242 KIVEIGT 248
           +IVE GT
Sbjct: 586 RIVEEGT 592


>gb|AAF58271.1| (AE003815) Mdr50 gene product [Drosophila melanogaster]
           Length = 1313
           
 Score = 84.3 bits (205), Expect = 2e-15
 Identities = 71/255 (27%), Positives = 123/255 (47%), Gaps = 22/255 (8%)

Query: 2   RKVPEPILQVRNLTVHF-YTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQ 60
           +K+ EP+  +    V F Y     V  + K++  +++G+T ALVG +GCGKS   + + +
Sbjct: 422 KKLNEPLTTIEFKEVEFQYPTRPEVSILNKLNLKIHRGQTVALVGPSGCGKSTCIQLVQR 481

Query: 61  LIESPGRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLY-TVG 119
             +       G +L+   +G+      L + +I  +R + I  + Q+P      +Y  + 
Sbjct: 482 FYDPQA----GNLLF---NGT-----NLKDLDINWLR-SRIGVVGQEPILFATSIYENIR 528

Query: 120 YQIAEAMEVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGI 179
           Y   +A     +I++       A+ I K     D    V     +LSGG KQR+ I   +
Sbjct: 529 YGREDA--TREEIEAAAAAANAAIFIKKLPKGYDTL--VGERGAQLSGGQKQRIAIARAL 584

Query: 180 SNNPRILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMY 239
             +P IL+ DE T+ALD   +A++   L K+      T I++ H L  V   ADR+ V+ 
Sbjct: 585 IRDPEILLLDEATSALDTASEAKVQAALEKVSA--GRTTIIVAHRLSTV-RRADRIVVIN 641

Query: 240 AGKIVEIGTVDQIFK 254
            G++VE GT  ++ +
Sbjct: 642 KGEVVESGTHQELME 656


>pir||E72314 ribose ABC transporter, ATP-binding protein - Thermotoga maritima
           (strain MSB8) >gi|4981493|gb|AAD36035.1|AE001758_13
           (AE001758) ribose ABC transporter, ATP-binding protein
           [Thermotoga maritima]
           Length = 523
           
 Score = 83.5 bits (203), Expect = 3e-15
 Identities = 77/254 (30%), Positives = 126/254 (49%), Gaps = 30/254 (11%)

Query: 3   KVPEPILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLI 62
           K  E +L+ RN+T    T+ G++ A+  V+  +YKGE  ALVGE G GKS   + +  + 
Sbjct: 7   KEREVLLEARNITK---TFPGVI-AVNNVTLQIYKGEVCALVGENGAGKSTLMKILAGVY 62

Query: 63  -ESPGRI-VEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGY 120
            +  G+I +EG+ + +R+               R+ + N IA I Q+    L P  +   
Sbjct: 63  PDYEGQIFLEGKEVRFRNP--------------REAQENGIALIPQE--LDLVPNLSSAE 106

Query: 121 QI---AEAMEVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGI 177
            I    E +   G I+  K   Q +    K  +  DP  +V     +LS   +Q V I  
Sbjct: 107 NIFLSREPVNEFGVIEYQKMFEQASKLFSKLGVNIDPKTKV----EDLSTSQQQMVAIAK 162

Query: 178 GISNNPRILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAV 237
            +S + +I+I DEPT+A+      Q+ +++  +K + K +VI I+H L  + E ADRV V
Sbjct: 163 ALSLDAKIIIMDEPTSAIGKRETEQLFNIIRSLKNEGK-SVIYISHRLEEIFEIADRVVV 221

Query: 238 MYAGKIVEIGTVDQ 251
           M  G+ V  G +++
Sbjct: 222 MRDGRKVGEGPIEE 235


>pir||H83346 probable ATP-binding/permease fusion ABC transporter PA2390
           [imported] - Pseudomonas aeruginosa (strain PAO1)
           >gi|9948431|gb|AAG05778.1|AE004665_5 (AE004665) probable
           ATP-binding/permease fusion ABC transporter [Pseudomonas
           aeruginosa]
           Length = 663
           
 Score = 83.1 bits (202), Expect = 4e-15
 Identities = 80/259 (30%), Positives = 128/259 (48%), Gaps = 28/259 (10%)

Query: 5   PEPILQVRNLTVHFYTYAGI----VKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQ 60
           P P++++R++      Y G     V+ ++ VS  ++ GE  A+VG +G GKS T   I  
Sbjct: 7   PVPLIELRDIRKR---YGGNGTPEVEVLKGVSLSIHAGEFVAIVGASGSGKS-TLMNILG 62

Query: 61  LIESPGRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGY 120
            ++ P     G    Y   G   D+ +L  +E   +R     ++FQ  H  L P  +   
Sbjct: 63  CLDRPS---SGS---YHFAGH--DVAELDSDEQAWLRREAFGFVFQGYH--LIPSASAQE 112

Query: 121 QIAEAMEVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGIS 180
            + E   ++  I +  E   +A  +L+ + +   A R  N PH+LSGG +QRV I   + 
Sbjct: 113 NV-EMPAIYAGIPA-SERHTRARALLERLGL---AERTANRPHQLSGGQQQRVSIARALM 167

Query: 181 NNPRILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYA 240
           N   I++ADEPT ALD    A+++ LL+++  +    VILITH+  V A  A R+  +  
Sbjct: 168 NGGHIILADEPTGALDSHSGAEVMALLDELASQ-GHVVILITHDRDVAAR-AKRIIEVRD 225

Query: 241 GKIVEIGTVDQIFKNPLHP 259
           G+IV     D+    P HP
Sbjct: 226 GEIVSDSANDE---RPAHP 241


>pir||T36431 probable ABC-type transport system ATP-binding protein -
           Streptomyces coelicolor >gi|5459222|emb|CAB48895.1|
           (AL096837) putative ABC transporter ATP-binding protein
           [Streptomyces coelicolor A3(2)]
           Length = 264
           
 Score = 82.7 bits (201), Expect = 5e-15
 Identities = 71/242 (29%), Positives = 112/242 (45%), Gaps = 22/242 (9%)

Query: 5   PEPILQVRNLTVHFYTYAGI---VKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQL 61
           P P  +   L     TY      V A++ V+  + +G   A++G +G GKS   +    L
Sbjct: 15  PGPASEALRLVKVTRTYGSADNAVTALDGVTLSLGRGTFTAVMGPSGSGKSTLLQCAAGL 74

Query: 62  IESPGRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQ 121
                 IV         DG   +L    E E+ K R   + ++FQ    +L    TV   
Sbjct: 75  DRPDSGIV-------CVDGK--ELTGGGEAELTKFRRGRVGFVFQQ--YNLLETLTVAQN 123

Query: 122 IAEAMEVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGISN 181
               +++ G+    K    +A ++L SV + D   R+ + P +LSGG +QRV I   +  
Sbjct: 124 TVLPLKLAGRRVDRK----RAREVLTSVGLGD---RLGHRPDQLSGGQRQRVAIARALVT 176

Query: 182 NPRILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYAG 241
            PR++ ADEPT ALD     Q+L LL +    +  TV+++TH+  V A  AD V  +  G
Sbjct: 177 EPRVIFADEPTGALDTRSARQVLLLLQEAARVHGRTVVMVTHD-PVAASYADSVVFLADG 235

Query: 242 KI 243
           ++
Sbjct: 236 RL 237


>pir||T26313 hypothetical protein W09D6.6 - Caenorhabditis elegans
           >gi|3880598|emb|CAB04947.1| (Z82078) predicted using
           Genefinder~contains similarity to Pfam domain: PF00005
           (ABC transporter), Score=210.9, E-value=6.1e-60,
           N=1~cDNA EST yk4g6.5 comes from this gene~cDNA EST
           yk10f3.5 comes from this gene~cDNA EST yk135g3.5 comes
           from this gene~cD>
           Length = 772
           
 Score = 82.3 bits (200), Expect = 7e-15
 Identities = 75/255 (29%), Positives = 116/255 (45%), Gaps = 46/255 (18%)

Query: 5   PEPILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIES 64
           P   + V+NLT  + T   ++K    +SF++  G+T ALVG +G GKS   R + +L ES
Sbjct: 517 PRGTISVKNLTFEYNTGLPVIK---NISFEIGNGQTVALVGSSGSGKSTLIRLLFRLFES 573

Query: 65  PGRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPL-YTVGY--- 120
                EG + +   DG  +D+   +   +R+    +I  + QD     D + Y + +   
Sbjct: 574 ----TEGSIEF---DG--IDVRNYTMHSLRQ----QIGIVPQDTVLFNDTIMYNIRFGRP 620

Query: 121 --------QIAEAMEVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQR 172
                   + A+A  +H KI S+ EG                A  V     +LSGG KQR
Sbjct: 621 DASDEEVIEAAKAAMIHEKITSLPEGY---------------ATMVGERGLKLSGGEKQR 665

Query: 173 VVIGIGISNNPRILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETA 232
           V I   I   P+ +  DE T+ALD   +  I   L K+ +    T +++ H L  V   A
Sbjct: 666 VAIARTILKKPQFIFLDEATSALDTPTERAIQKCLEKLCK--SRTGVVVAHRLSTVV-NA 722

Query: 233 DRVAVMYAGKIVEIG 247
           D + V+  G I+E G
Sbjct: 723 DLILVLDKGIILERG 737


>pir||T18939 hypothetical protein C05A9.1 - Caenorhabditis elegans
           >gi|3874030|emb|CAA94202.1| (Z70265) Similarity to
           C.elegans p-glycoprotein (SW:MDR1_CAEEL), contains
           similarity to Pfam domain: PF00005 (ABC transporter),
           Score=413.1, E-value=8.4e-121, N=2; PF00664 (ABC
           transporter transmembrane region.), Score=192.1,
           E-value=2.9e-54, N=2~cDNA >
           Length = 1283
           
 Score = 81.9 bits (199), Expect = 9e-15
 Identities = 70/232 (30%), Positives = 116/232 (49%), Gaps = 27/232 (11%)

Query: 25  VKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIESPGRIVEGQVLYYRDDGSVVD 84
           V  ++++SF+V  GE  ALVG +G GKS     + QL+     I  G++     DG+  D
Sbjct: 420 VPVLKEISFNVQGGECIALVGASGSGKST----VIQLLLHYYNIDSGRISI---DGN--D 470

Query: 85  LLKLSEEEIRKIRGNEIAYIFQDP---HASLDPLYTVGYQIAEAMEVHGKIKSIKEGIQK 141
           +  ++ +++R+  G     +FQ+P   + S++     G   A   E+   +K+       
Sbjct: 471 IYNINIKQLRQAMG----VVFQEPVLFNTSIEENIRFGKPDATEQEIIDALKNAN----- 521

Query: 142 AVDILKSVLIPDPARR-VNNYPHELSGGMKQRVVIGIGISNNPRILIADEPTTALDVTIQ 200
           A D + +   PD  +  V     +LSGG KQR+ I   +  NPRIL+ DE T+ALD   +
Sbjct: 522 AFDFVCN--FPDGIKTIVGERGAQLSGGQKQRIAIARTLVRNPRILLLDEATSALDNESE 579

Query: 201 AQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYAGKIVEIGTVDQI 252
             + + L   K     T I++ H L  +   A+++ VM  G+IVE+G   Q+
Sbjct: 580 FIVQEAL--QKASIGRTTIVVAHRLSTI-RNANKIIVMEKGEIVEVGDHKQL 628


 Score = 76.1 bits (184), Expect = 5e-13
 Identities = 68/263 (25%), Positives = 124/263 (46%), Gaps = 39/263 (14%)

Query: 2    RKVPEPILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQL 61
            R +    ++++N++   Y        ++ VS  +  G T ALVG +G GKS     I  L
Sbjct: 1029 RNIKNGEIELKNVSFE-YAQRSDKMILDGVSLKLPAGRTLALVGPSGSGKST----IISL 1083

Query: 62   IESPGRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDP---HASLDPLYTV 118
            +E     V+G+V    D+ +VVD+       +  +R   ++ + Q+P   + S+   +  
Sbjct: 1084 LERFYHAVDGEVKI--DEENVVDV------NLHHLR-ESVSLVSQEPVLFNCSIKENFLF 1134

Query: 119  GY-------QIAEAMEVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQ 171
            G        +I +A++V      + +   + +D L           V     +LSGG KQ
Sbjct: 1135 GISHNASQLEIDQALKVANAFSFVSQ-FPQGLDTL-----------VGERGAQLSGGQKQ 1182

Query: 172  RVVIGIGISNNPRILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAET 231
            R+ I   I  NP++L+ DE T+ALD   +  + + L+   E  + + +++ H L  V   
Sbjct: 1183 RIAIARAILRNPKVLLLDEATSALDSDSEKVVQNALDTASE--RLSTVVVAHRLSTVV-N 1239

Query: 232  ADRVAVMYAGKIVEIGTVDQIFK 254
            AD +AV+  GK+ E GT +++ +
Sbjct: 1240 ADSIAVLKNGKVAEQGTHEELLR 1262


>pir||S74440 iron(III) dicitrate transport system permease protein fecE -
           Synechocystis sp. (strain PCC 6803)
           >gi|1651664|dbj|BAA16592.1| (D90899) iron(III) dicitrate
           transport system permease protein FecE [Synechocystis
           sp.]
           Length = 268
           
 Score = 81.1 bits (197), Expect = 2e-14
 Identities = 72/277 (25%), Positives = 127/277 (44%), Gaps = 26/277 (9%)

Query: 1   MRKVPEPI-LQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAIT 59
           M  V  PI L  R L++ + ++      I+ +   + +GE   LVG  GCGKS   R + 
Sbjct: 1   MLDVATPIALTTRKLSLAYDSHL----IIQGLDLAINQGEITTLVGPNGCGKSTLLRGMA 56

Query: 60  QLIESPGRIV--EGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYT 117
           +L++  G  V  EG+ + +           L  +E+ K     +  + Q P A      T
Sbjct: 57  RLLKPQGGTVYLEGEAIAH-----------LPTKELAK----RLGILPQSPPAPEG--LT 99

Query: 118 VGYQIAEAMEVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGI 177
           V   +A+    H      +   Q  + + +++   D  +  N     LSGG +QR  I +
Sbjct: 100 VRELVAQGRYPHQNWLQ-QWSKQDELKVEEAIATTDLHQFANRPLDSLSGGQRQRAWIAM 158

Query: 178 GISNNPRILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAV 237
            ++ +  IL+ DEPTT LD+  Q ++LDLL+ +  +   T++++ H+L +    + R+  
Sbjct: 159 ALAQDTEILLLDEPTTYLDLAHQIEVLDLLHWLNREAGRTIVMVLHDLNLACRYSHRLIA 218

Query: 238 MYAGKIVEIGTVDQIFKNPLHPYTQGL-LRAVPNPLT 273
           +  GK++  G    I    L     GL  R + +P+T
Sbjct: 219 LRDGKLLAQGRPQAIVTEELVRQVFGLESRIIADPVT 255


>dbj|BAB07160.1| (AP001518) L-arabinose ABC transporter (ATP-binding protein)
           [Bacillus halodurans]
           Length = 517
           
 Score = 80.4 bits (195), Expect = 3e-14
 Identities = 68/243 (27%), Positives = 113/243 (45%), Gaps = 21/243 (8%)

Query: 4   VPEPILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIE 63
           +P  +L++RN+T  F      VKA+  V+  V +GE  ALVGE G GKS   + ++ +  
Sbjct: 3   MPNCLLEMRNITKAFPG----VKALNNVNLKVEQGEIHALVGENGAGKSTLMKVLSGVY- 57

Query: 64  SPGRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQIA 123
            P    EG +L+   +G V     + E E       ++  +      +L P  ++   I 
Sbjct: 58  -PHGTYEGDILF---EGRVCQFKDIKESE-------QLGIVIIHQELALVPELSIAENIF 106

Query: 124 EAME-VHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGISNN 182
              E     +    + I +A  +LK V + D  R +      +  G +Q V I   +S  
Sbjct: 107 LGNEQAKNGVIDWNQTITEAAKLLKKVGLSDSPRTL---AMNIGVGKQQLVEIAKALSKK 163

Query: 183 PRILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYAGK 242
            ++LI DEPT AL+      +L LL + K K   T I+I+H L  ++  AD + ++  G+
Sbjct: 164 VKLLILDEPTAALNEEDSQNLLHLLLEFK-KQGMTSIIISHKLNEISYVADHLTILRDGQ 222

Query: 243 IVE 245
            +E
Sbjct: 223 SIE 225


>sp|P55453|Y4FO_RHISN PUTATIVE ABC TRANSPORTER ATP-BINDING PROTEIN Y4FO
           >gi|2182398|gb|AAB91671.1| (AE000073) Y4fO [Rhizobium
           sp. NGR234]
           Length = 339
           
 Score = 79.2 bits (192), Expect = 6e-14
 Identities = 66/261 (25%), Positives = 121/261 (46%), Gaps = 30/261 (11%)

Query: 2   RKVPEPILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQL 61
           R + + +L +  L V F      +  +  ++ DV  G   +L+G +G GKS   R I  L
Sbjct: 6   RAMADSVLSLNKLDVGFPG----MTVVRDLNLDVADGAFVSLLGPSGSGKSSVLRTIAGL 61

Query: 62  IESPGR--IVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVG 119
           + + G   ++EGQ           D+  L  E         +  +FQ+   +L P  +  
Sbjct: 62  LPALGGRVLLEGQ-----------DITALPPER------RNVGIVFQN--YALFPTMSAF 102

Query: 120 YQIAEAMEVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGI 179
             IA A+ V  K K+  E  ++  ++ +   I D   +++  P  +SGG +QRV I   +
Sbjct: 103 ENIAFALRVAKKSKAEVE--RRVGEVAEMAGISD---QLDKKPANMSGGQQQRVAIARAL 157

Query: 180 SNNPRILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMY 239
               R+L+ DEP + LD  ++A +   + +++ +   T I +TH+       +D + V+ 
Sbjct: 158 VTGSRVLLFDEPLSNLDAKVRAAMRKEIKRLQSELGFTAIFVTHDQEDALTMSDLIVVLN 217

Query: 240 AGKIVEIGTVDQIFKNPLHPY 260
            GKI +IG    +++ P  P+
Sbjct: 218 HGKIEQIGDGRTLYRKPATPF 238


>pir||T21267 hypothetical protein F22E10.2 - Caenorhabditis elegans
           >gi|3876292|emb|CAA91800.1| (Z67882) contains similarity
           to Pfam domain: PF00005 (ABC transporter), Score=436.2,
           E-value=9.4e-128, N=2; PF00664 (ABC transporter
           transmembrane region.), Score=221.5, E-value=4e-63, N=2
           [Caenorhabditis elegans]
           Length = 1291
           
 Score = 79.2 bits (192), Expect = 6e-14
 Identities = 71/264 (26%), Positives = 123/264 (45%), Gaps = 44/264 (16%)

Query: 2   RKVPEPILQVRNLTVHF-YTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQ 60
           +K+ + + +V    VHF Y      K +  ++  V  G + ALVG +GCGKS +   +T+
Sbjct: 375 KKIEKVVGKVTFENVHFRYPTRKEAKVLNGLNLTVEPGTSVALVGHSGCGKSTSVGLLTR 434

Query: 61  LIESPGRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRG---------NEIAY---IFQDP 108
           L E      +G V   + DG  VD+  L+ E +R + G         N+  +   +F +P
Sbjct: 435 LYEPE----QGSV---QIDG--VDVRDLNLEWLRNVVGIVQQEPILFNDTIHNNLLFGNP 485

Query: 109 HASLDPLYTVGYQIAEAMEVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGG 168
            A+ + +     ++ +    H  IK + +G                  ++ +   +LSGG
Sbjct: 486 DATRETMI----RVCKMANAHDFIKKMPKGYDT---------------QIGDGGVQLSGG 526

Query: 169 MKQRVVIGIGISNNPRILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVV 228
            KQRV I   +  +P++L+ DE T+ALD   ++ +   LN   +    T I+I H L  +
Sbjct: 527 QKQRVAIARTLIRDPKVLLLDEATSALDAQSESVVQSALNNASK--GRTTIMIAHRLSTI 584

Query: 229 AETADRVAVMYAGKIVEIGTVDQI 252
            E AD++     G IVE G  +++
Sbjct: 585 RE-ADKIVFFEKGVIVEAGNHEEL 607


>pir||G75142 abc transporter, ATP-binding protein PAB2147 - Pyrococcus abyssi
           (strain Orsay) >gi|5457732|emb|CAB49222.1| (AJ248284)
           ABC transporter, ATP-binding protein [Pyrococcus abyssi]
           Length = 579
           
 Score = 78.4 bits (190), Expect = 1e-13
 Identities = 71/255 (27%), Positives = 128/255 (49%), Gaps = 32/255 (12%)

Query: 5   PEPILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIES 64
           P   ++ R++ + ++T   ++K    VSF V  GE   + G  G GKS    +I +LI  
Sbjct: 335 PRGEIEFRDVWLTYHTGRTVLKG---VSFKVKPGEKVLITGPPGSGKS----SILKLIAR 387

Query: 65  PGRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQIAE 124
             +  +G+VL    DG  V++ K+  E +RKI    +AY+ Q+P       +     I E
Sbjct: 388 FYKPTKGEVLI---DG--VNVAKIKTENLRKI----VAYVPQEP-------FIFNRSIRE 431

Query: 125 AMEVHGKIKSIKEGIQKAVDILK-----SVLIPDPARRVNNYPHELSGGMKQRVVIGIGI 179
            + +  K  + +E +++A  I K     + L       V      LSGG +QR+ +   +
Sbjct: 432 NIAL-AKPNATQEEVERAAKIAKIHDFIASLPKGYDTVVGEKGITLSGGQRQRIALARAM 490

Query: 180 SNNPRILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMY 239
             NP+I++ D+P + LD   + ++++ L ++ +    T ++++  L +V +  DRV VM 
Sbjct: 491 LMNPKIVLLDDPVSNLDAETEKKLVEDLKEILQ--DKTALIVSQRLSLV-KLVDRVIVMK 547

Query: 240 AGKIVEIGTVDQIFK 254
            GKIVE G  +++ K
Sbjct: 548 DGKIVEDGKPEELIK 562


>pir||G81022 ABC transporter, ATP-binding protein NMB1966 [imported] - Neisseria
           meningitidis (group B strain MD58)
           >gi|7227226|gb|AAF42295.1| (AE002544) ABC transporter,
           ATP-binding protein [Neisseria meningitidis MC58]
           Length = 266
           
 Score = 78.0 bits (189), Expect = 1e-13
 Identities = 69/249 (27%), Positives = 126/249 (49%), Gaps = 22/249 (8%)

Query: 5   PEPILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIES 64
           P P ++++++   +    G    ++ ++F + +G   A++G +G GK+   R IT  I  
Sbjct: 3   PSPFIEMKDVAFAY----GDRPILKNINFSIPQGNFAAVMGGSGSGKTTLMRLITGQI-- 56

Query: 65  PGRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQIAE 124
             R   GQVL    +G   DL   S +E+ + R   +  +FQ  H +L    +V   IA 
Sbjct: 57  --RPQSGQVLI---EGR--DLAGFSADELYEHR-RRMGVLFQ--HGALFTDLSVFDNIAF 106

Query: 125 AMEVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNY-PHELSGGMKQRVVIGIGISNNP 183
            M    ++  + E + + + +LK   +    R V N  P ELSGGM +RV +   I+ +P
Sbjct: 107 PMR---ELTRLPEAVIRDLVLLKLNAVG--LRGVENLMPSELSGGMSRRVALARTIALDP 161

Query: 184 RILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYAGKI 243
            I++ DEP T LD      I  L++++ +  ++T I++TH++    E  D+V  +  G+I
Sbjct: 162 EIMLYDEPFTGLDPISLGVIAHLISRVNKALRSTSIMVTHDIEKSLEIVDQVIFLAHGEI 221

Query: 244 VEIGTVDQI 252
           +  G+  ++
Sbjct: 222 MFSGSPQEM 230


>dbj|BAA75396.1| (AB013378) YhaQ [Bacillus halodurans]
           Length = 314
           
 Score = 77.6 bits (188), Expect = 2e-13
 Identities = 65/248 (26%), Positives = 117/248 (46%), Gaps = 31/248 (12%)

Query: 5   PEPILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIES 64
           P  I++  N+T  F    G   A+ +++ +V +GE +  +G  G GKS T R +  ++++
Sbjct: 9   PMEIVKATNVTKRF----GAFTALNRINLEVQRGEIYGFIGPNGAGKSTTIRILLGILKA 64

Query: 65  PGRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQIAE 124
                EG+   +  D      +     EI K     +AY+  D   SL P  T G  I  
Sbjct: 65  S----EGEAKIFGKD------VWSDAVEIHK----HLAYVPGD--VSLWPNLTGGEVIDL 108

Query: 125 AMEVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGISNNPR 184
            M++ G +       +K  D        DP+++   Y    S G +Q+V +    ++   
Sbjct: 109 FMKLRGSVD------KKRRDHFIERFKLDPSKKCRTY----SKGNRQKVALVAAFASGAD 158

Query: 185 ILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYAGKIV 244
           + I DEPT+ LD  ++    + + + KE  K +V+L +H L  V    D+V ++  G+++
Sbjct: 159 LYILDEPTSGLDPLMERVFQECVLEAKEAGK-SVLLSSHILSEVERLCDKVGIIRQGEMI 217

Query: 245 EIGTVDQI 252
           E GT+D++
Sbjct: 218 ETGTLDEL 225


>pir||T10656 probable ABC-type transport protein T5F17.70 - Arabidopsis thaliana
           >gi|7269717|emb|CAB81450.1| (AL161573) ABC
           transporter-like protein [Arabidopsis thaliana]
           >gi|9964119|gb|AAG09828.1|AF287698_1 (AF287698)
           half-molecule ABC transporter ATM2 [Arabidopsis
           thaliana]
           Length = 680
           
 Score = 77.6 bits (188), Expect = 2e-13
 Identities = 74/256 (28%), Positives = 119/256 (45%), Gaps = 35/256 (13%)

Query: 2   RKVPEPILQVRNLT---VHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAI 58
           RK+P  +L+  +++   VHF +Y    K ++ +SF+V  G++ A+VG +G GKS   R I
Sbjct: 427 RKLPPLVLKGGSISFENVHF-SYLPERKILDGISFEVPAGKSVAIVGSSGSGKSTILRMI 485

Query: 59  TQLIESPGRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIR----GNEIAYIFQDPHASLDP 114
            +  +              D G+V    K+  ++I+++R     + I  + QD     D 
Sbjct: 486 FRFFDV-------------DSGNV----KIDGQDIKEVRLESLRSSIGVVPQDTVLFNDT 528

Query: 115 LY-TVGYQIAEAMEVHGKIKSIKEGIQKAVDILKSVLIPDP-ARRVNNYPHELSGGMKQR 172
           ++  + Y    A E     + +    ++A      +  PD  +  V      LSGG KQR
Sbjct: 529 IFHNIHYGNLSATE-----EEVYNAARRAAIHDTIMKFPDKYSTAVGERGLMLSGGEKQR 583

Query: 173 VVIGIGISNNPRILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETA 232
           V +      +P IL+ DE T+ALD   +A+I+  L  +      T I I H L   A   
Sbjct: 584 VALARAFLKSPAILLCDEATSALDSKTEAEIMKTLRSLAS--NRTCIFIAHRL-TTAMQC 640

Query: 233 DRVAVMYAGKIVEIGT 248
           D + VM  GK+VE GT
Sbjct: 641 DEILVMEKGKVVEKGT 656


>pir||T22094 hypothetical protein ZK455.7 - Caenorhabditis elegans
           >gi|3877009|emb|CAA91467.1| (Z66562) multidrug
           resistance protein 3 (p-glycoprotein C), contains
           similarity to Pfam domain: PF00005 (ABC transporter),
           Score=417.1, E-value=5.3e-122, N=2; PF00664 (ABC
           transporter transmembrane region.), Score=489.5,
           E-value=8.5e-144, N=2~cDNA EST >
           >gi|3881645|emb|CAA91495.1| (Z66567) multidrug
           resistance protein 3 (p-glycoprotein C), contains
           similarity to Pfam domain: PF00005 (ABC transporter),
           Score=417.1, E-value=5.3e-122, N=2; PF00664 (ABC
           transporter transmembrane region.), Score=489.5,
           E-value=8.5e-144, N=2~cDNA EST >
           Length = 1268
           
 Score = 77.3 bits (187), Expect = 2e-13
 Identities = 74/261 (28%), Positives = 113/261 (42%), Gaps = 39/261 (14%)

Query: 3   KVPEPILQVRNLTVHFYTYAGI--VKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQ 60
           K+PE I          +TY     +K ++ VSF+V  GET ALVG +GCGKS +   + +
Sbjct: 367 KIPEKIQGKLTFDGIEFTYPTRPELKILKGVSFEVNPGETVALVGHSGCGKSTSIGLLMR 426

Query: 61  LIESPGRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDP---------HAS 111
                  +++            +D + + E  IR +R   I  + Q+P         +  
Sbjct: 427 FYNQCAGMIK------------LDGIPIQEYNIRWLRST-IGIVQQEPIIFVATVAENIR 473

Query: 112 LDPLYTVGYQIAEAMEVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQ 171
           +  +      I EA     K+ +  E I K  D   +V+             +LSGG KQ
Sbjct: 474 MGDVLITDQDIEEAC----KMANAHEFICKLSDRYDTVIGAGAV--------QLSGGQKQ 521

Query: 172 RVVIGIGISNNPRILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAET 231
           RV I   I   P+IL+ DE T+ALD   +  +   L+K  E    T + I H L  +   
Sbjct: 522 RVAIARAIVRKPQILLLDEATSALDTESERMVQTALDKASE--GRTTLCIAHRLSTI-RN 578

Query: 232 ADRVAVMYAGKIVEIGTVDQI 252
           A ++ V   G I E GT D++
Sbjct: 579 ASKILVFDQGLIAERGTHDEL 599


 Score = 73.4 bits (177), Expect = 4e-12
 Identities = 71/216 (32%), Positives = 106/216 (48%), Gaps = 29/216 (13%)

Query: 38   GETFALVGETGCGKSVTSRAITQLIESPGRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIR 97
            G+T ALVG +GCGKS T     QLIE     + G V    DD  + DL       ++ +R
Sbjct: 1057 GQTVALVGPSGCGKSTT----IQLIERYYDALCGSVKI--DDSDIRDL------SVKHLR 1104

Query: 98   GNEIAYIFQDPHASLDPLYTVGYQIAEAMEVHGKIKSIKEGIQKAVDILK----SVLIPD 153
             N IA + Q+P  +L  L T+   I   +E        ++ ++KA  +       + +PD
Sbjct: 1105 DN-IALVGQEP--TLFNL-TIRENITYGLE-----NITQDQVEKAATLANIHTFVMGLPD 1155

Query: 154  P-ARRVNNYPHELSGGMKQRVVIGIGISNNPRILIADEPTTALDVTIQAQILDLLNKMKE 212
                 V      LSGG KQRV I   I  +P+IL+ DE T+ALD   +  + + L+  K 
Sbjct: 1156 GYDTSVGASGGRLSGGQKQRVAIARAIVRDPKILLLDEATSALDTESEKIVQEALD--KA 1213

Query: 213  KYKATVILITHNLGVVAETADRVAVMYAGKIVEIGT 248
            +   T ++I H L  + + AD++ V   GK +E GT
Sbjct: 1214 RLGRTCVVIAHRLSTI-QNADKIIVCRNGKAIEEGT 1248


>pir||S72783 probable ABC-type transport protein B1496_F3_97 - Mycobacterium
           leprae >gi|466902|gb|AAA17147.1| (U00013) abc2;
           B1496_F3_97 [Mycobacterium leprae]
           >gi|2398710|emb|CAB16175.1| (Z99125) ABC-type
           transporter [Mycobacterium leprae]
           Length = 315
           
 Score = 76.9 bits (186), Expect = 3e-13
 Identities = 59/250 (23%), Positives = 110/250 (43%), Gaps = 31/250 (12%)

Query: 3   KVPEPILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLI 62
           + PE ++++R +  H+    G + A+  +  D++  E  AL+G  G GK+ T        
Sbjct: 9   ETPEVVIRLRGVCKHY----GSILAVSNLDLDIHSAEVLALLGPNGAGKTTTVE------ 58

Query: 63  ESPGRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQI 122
                + EG   + R D   +++L L            I  + Q            GY  
Sbjct: 59  -----MCEG---FVRPDAGTIEVLGLDPITDNARLRARIGVMLQGGG---------GYPA 101

Query: 123 AEAMEVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGISNN 182
           A A E+   + S          +L+++ + D AR        LSGG +QR+ +   +   
Sbjct: 102 ARAGEMLNLVASYAADPLDPEWLLETLGLTDVARTTYR---RLSGGQQQRLALACTLVGR 158

Query: 183 PRILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYAGK 242
           P ++  DEPT  +D   +  + +L++ ++ +   TV+L TH L    E ADR+ ++  G+
Sbjct: 159 PELVFLDEPTAGMDTHARLLVWELIDTLR-RDGVTVVLTTHQLKEAEELADRLVIIDHGR 217

Query: 243 IVEIGTVDQI 252
           ++  GT  ++
Sbjct: 218 MIAAGTPTEL 227


>gb|AAD02044.1| (AF035964) ATP-binding protein A [Brucella abortus]
           Length = 622
           
 Score = 76.9 bits (186), Expect = 3e-13
 Identities = 73/260 (28%), Positives = 126/260 (48%), Gaps = 37/260 (14%)

Query: 3   KVPEPILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLI 62
           KV    L    +  H+    G++K    +S  +  G+   LVG +G GKS     + +  
Sbjct: 359 KVARGDLDFDEIGFHYGRGKGVIK---NLSLTIPAGQKVGLVGRSGAGKSTLVNLLLRFY 415

Query: 63  ESPGRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQI 122
           +    + +G++L    DG   D+ +++++ +R      I  + QD         ++ ++ 
Sbjct: 416 D----LEKGRILI---DGQ--DISQVTQDSLRA----NIGMVTQDT--------SLLHRS 454

Query: 123 AEAMEVHGKIKSIKEGIQKAVDILKS-VLIP---DPARRVNNYPH------ELSGGMKQR 172
                ++G+  + +E +Q+A+ + ++   IP   DP  R     H      +LSGG +QR
Sbjct: 455 VRENIMYGRPDASEEMLQQAIRLAQADQFIPQLVDPKGRRGLDAHVGERGVKLSGGQRQR 514

Query: 173 VVIGIGISNNPRILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETA 232
           + I   +  +  ILI DE T+ALD  ++A I D LN + E    TVI I H L  +A   
Sbjct: 515 IAIARVMLKDAPILILDEATSALDSEVEAAIQDSLNTLME--GKTVIAIAHRLSTIA-AL 571

Query: 233 DRVAVMYAGKIVEIGTVDQI 252
           DR+ VM  G+IVE GT +++
Sbjct: 572 DRLVVMDKGRIVEDGTHEEL 591


>pir||B81966 probable ABC transport ATP-binding protein NMA0485 [imported] -
           Neisseria meningitidis (group A strain Z2491)
           >gi|7379229|emb|CAB83778.1| (AL162753) putative ABC
           transport ATP-binding protein [Neisseria meningitidis
           Z2491]
           Length = 286
           
 Score = 76.5 bits (185), Expect = 4e-13
 Identities = 65/251 (25%), Positives = 126/251 (49%), Gaps = 26/251 (10%)

Query: 5   PEPILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAIT-QLIE 63
           P P ++++++   +    G    +  ++F + +G   A++G +G GK+   R IT Q+  
Sbjct: 23  PSPFIEMKDVAFAY----GDRPILNDINFSIPQGNFAAVMGGSGSGKTTLMRLITGQIRP 78

Query: 64  SPGRI-VEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQI 122
             G++ +EG+           DL   S +E+ + R   +  +FQ  H +L    +V   I
Sbjct: 79  QSGKVLIEGR-----------DLAGFSADELYEHR-RRMGVLFQ--HGALFTDLSVFDNI 124

Query: 123 AEAMEVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNY-PHELSGGMKQRVVIGIGISN 181
           A  M    ++  + E + + + +LK   +    R V N  P ELSGGM +RV +   I+ 
Sbjct: 125 AFPMR---ELTRLPEAVIRDLVLLKLNAVG--LRGVENLMPSELSGGMSRRVALARTIAL 179

Query: 182 NPRILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYAG 241
           +P I++ DEP T LD      I  L++++ +  ++T +++TH++    E  D+V  +  G
Sbjct: 180 DPEIMLYDEPFTGLDPISLGVIAHLISRVNKALRSTSVMVTHDIEKSLEIVDQVIFLAHG 239

Query: 242 KIVEIGTVDQI 252
           +I+  G+  ++
Sbjct: 240 EIMFSGSPQEM 250


>dbj|BAB06054.1| (AP001515) ABC transporter (ATP-binding protein) [Bacillus
           halodurans]
           Length = 599
           
 Score = 76.5 bits (185), Expect = 4e-13
 Identities = 70/254 (27%), Positives = 124/254 (48%), Gaps = 32/254 (12%)

Query: 4   VPEPILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIE 63
           + E  ++ RN++   ++Y G    ++ +SF V KGET ALVG TG GK+    +I  ++ 
Sbjct: 348 IGEGNVEFRNVS---FSYDGKTNVLKNISFTVKKGETVALVGHTGSGKT----SIINVLM 400

Query: 64  SPGRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQIA 123
               + +G++L        +D   L+  E  ++R  ++  + QDP      LYT    IA
Sbjct: 401 RFYPLQDGEIL--------IDGKPLTSFENNELRA-KVGLVLQDPF-----LYT--GTIA 444

Query: 124 EAMEVHGKIKSIKEGIQKAVDILKS-----VLIPDPARRVNNYPHELSGGMKQRVVIGIG 178
             + ++ +  S  + I++A   +++      L      +V       S G +Q +     
Sbjct: 445 SNIRLYDQAIS-DDRIKRAASFVRADGFIERLSHGYETKVTERGATFSSGQRQLLSFART 503

Query: 179 ISNNPRILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVM 238
           +   P ILI DE T ++D   +  I + L +MK+    T I I H L  + + AD++ V+
Sbjct: 504 MVREPAILILDEATASVDTETEEAIQEALERMKQ--GRTTIAIAHRLSTIKD-ADQILVL 560

Query: 239 YAGKIVEIGTVDQI 252
           + G+IVE GT D++
Sbjct: 561 HQGEIVERGTHDEL 574


>pir||T10657 probable ABC-type transport protein T5F17.80 - Arabidopsis thaliana
           >gi|7269718|emb|CAB81451.1| (AL161573) ABC
           transporter-like protein [Arabidopsis thaliana]
           Length = 677
           
 Score = 76.1 bits (184), Expect = 5e-13
 Identities = 74/251 (29%), Positives = 117/251 (46%), Gaps = 27/251 (10%)

Query: 3   KVPEPILQVRNLT---VHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAIT 59
           K+P  +L+  +++   VHF +Y    K ++ +SF+V  G++ A+VG +G GKS   R I 
Sbjct: 425 KLPPLVLRGGSISFENVHF-SYLPERKILDGISFEVPAGKSVAIVGSSGSGKSTILRMIF 483

Query: 60  QLIESPGRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLY-TV 118
           +  ++    V       R DG   D+ +++ E +R      I  + QD     D ++  +
Sbjct: 484 RFFDTDSGNV-------RIDGQ--DIKEVTLESLRSC----IGVVPQDTVLFNDTIFHNI 530

Query: 119 GYQIAEAMEVHGKIKSIKEGIQKAVDILKSVLIPDP-ARRVNNYPHELSGGMKQRVVIGI 177
            Y    A E     + + +  ++AV     +  PD  +  V      LSGG KQRV +  
Sbjct: 531 HYGNLSATE-----EEVYDAARRAVIHDTIMKFPDKYSTAVGERGLMLSGGEKQRVALAR 585

Query: 178 GISNNPRILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAV 237
               +P IL+ DE T ALD   +A+I+     +      T I I H L   A   D + V
Sbjct: 586 AFLKSPAILLCDEATNALDSKTEAEIMKTFRSLAS--NRTCIFIAHRL-TTAMQCDEIIV 642

Query: 238 MYAGKIVEIGT 248
           M  GK+VE GT
Sbjct: 643 MEKGKVVEKGT 653


>gb|AAG09827.1|AF287697_1 (AF287697) half-molecule ABC transporter ATM1 [Arabidopsis
           thaliana]
           Length = 678
           
 Score = 76.1 bits (184), Expect = 5e-13
 Identities = 74/251 (29%), Positives = 117/251 (46%), Gaps = 27/251 (10%)

Query: 3   KVPEPILQVRNLT---VHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAIT 59
           K+P  +L+  +++   VHF +Y    K ++ +SF+V  G++ A+VG +G GKS   R I 
Sbjct: 426 KLPPLVLRGGSISFENVHF-SYLPERKILDGISFEVPAGKSVAIVGSSGSGKSTILRMIF 484

Query: 60  QLIESPGRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLY-TV 118
           +  ++    V       R DG   D+ +++ E +R      I  + QD     D ++  +
Sbjct: 485 RFFDTDSGNV-------RIDGQ--DIKEVTLESLRSC----IGVVPQDTVLFNDTIFHNI 531

Query: 119 GYQIAEAMEVHGKIKSIKEGIQKAVDILKSVLIPDP-ARRVNNYPHELSGGMKQRVVIGI 177
            Y    A E     + + +  ++AV     +  PD  +  V      LSGG KQRV +  
Sbjct: 532 HYGNLSATE-----EEVYDAARRAVIHDTIMKFPDKYSTAVGERGLMLSGGEKQRVALAR 586

Query: 178 GISNNPRILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAV 237
               +P IL+ DE T ALD   +A+I+     +      T I I H L   A   D + V
Sbjct: 587 AFLKSPAILLCDEATNALDSKTEAEIMKTFRSLAS--NRTCIFIAHRL-TTAMQCDEIIV 643

Query: 238 MYAGKIVEIGT 248
           M  GK+VE GT
Sbjct: 644 MEKGKVVEKGT 654


>emb|CAC11370.1| (AL445063) gliding motility protein related [Thermoplasma
           acidophilum]
           Length = 305
           
 Score = 76.1 bits (184), Expect = 5e-13
 Identities = 67/246 (27%), Positives = 114/246 (46%), Gaps = 28/246 (11%)

Query: 4   VPEPILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIE 63
           +P+ +++V +L     TY G    ++ VSF V KGE + L+G+ G GK+ T R +T ++ 
Sbjct: 1   MPDKVIEVEHLR---QTYDGRTFVVDDVSFYVLKGEIYGLLGKNGAGKTTTIRTMTTILP 57

Query: 64  SPGRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQIA 123
                     ++Y   G V  L     E   KIR   I  + Q+              + 
Sbjct: 58  ----------VHY---GKVRILGMDVSENAEKIR-RRIGVVLQNESFDF-------ASVE 96

Query: 124 EAMEVHGKIKSIKEGIQKA-VDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGISNN 182
             ++V+G +  +   + KA ++ +  V      R+V     ELSGG K+R+ +     ++
Sbjct: 97  RNLKVYGMLWDVPREVLKARIEEVLEVFDLGQLRKVR--AMELSGGQKKRLQVAREFLHD 154

Query: 183 PRILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYAGK 242
             +L  DEPT  LD  ++  +L+ + + K +   TV+  T  +       DR+A+M  GK
Sbjct: 155 MDLLFLDEPTVGLDPIMRRSVLNYI-RDKARKGLTVLYTTQIMEEADYLCDRIAIMNRGK 213

Query: 243 IVEIGT 248
           IV  GT
Sbjct: 214 IVAEGT 219


>pir||S74597 ABC-type transport protein sll1041 - Synechocystis sp.  (strain PCC
           6803) >gi|1651822|dbj|BAA16749.1| (D90900) ABC
           transporter [Synechocystis sp.]
           Length = 260
           
 Score = 75.3 bits (182), Expect = 9e-13
 Identities = 73/271 (26%), Positives = 121/271 (43%), Gaps = 38/271 (14%)

Query: 1   MRKVPEPILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQ 60
           M +  +PI++ R ++  F    G    ++ V   +Y GE   ++G +G GKS   R +  
Sbjct: 1   MSEPVQPIIEFRGVSQSF----GRKVILDDVDLKIYPGEAVGVIGPSGTGKSTILRIVAG 56

Query: 61  LI--ESPGRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTV 118
           L+  +S   IV G    +R   S+        EE  K  G  + +       SL     V
Sbjct: 57  LLTPDSGEVIVHG----HRRQRSI--------EEGEKALGVGLVFQQSALFDSLTVAENV 104

Query: 119 GYQIAEAMEVHGK-IKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGI 177
           G+ +    ++  + I++I E      + L+ V +P    R   +P ELSGGM++RV +  
Sbjct: 105 GFTLYRDSDLRPREIRAIVE------ENLELVGLPGIGDR---FPAELSGGMRKRVSLAR 155

Query: 178 GISNNPR-------ILIADEPTTALDVTIQAQILDLLNKM--KEKYKATVILITHNLGVV 228
            I  NP        IL+ DEPT  LD     +I  L+  +  ++      +++TH    +
Sbjct: 156 AIVINPEQHQQYKNILLYDEPTAGLDPVASTRIESLIRHLLSQDHVCCCYLIVTHQFSTI 215

Query: 229 AETADRVAVMYAGKIVEIGTVDQIFKNPLHP 259
             T DR+  +Y GKI   G+    +K+  HP
Sbjct: 216 DNTTDRIIFLYDGKIQWDGSTADAYKSE-HP 245


>gb|AAD29087.1|AF082879_3 (AF082879) FepC [Yersinia enterocolitica]
           Length = 272
           
 Score = 74.5 bits (180), Expect = 2e-12
 Identities = 68/267 (25%), Positives = 120/267 (44%), Gaps = 34/267 (12%)

Query: 5   PEPILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIES 64
           P P L    LT+    Y G + + E +S  +  GE   +VG   CGKS   RA+++L++ 
Sbjct: 10  PTPRLWAEALTLG---YDGKIIS-ENLSVAIPDGEFTVIVGPNACGKSTLLRALSRLLKP 65

Query: 65  PGR--IVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIF---QDPHASLDPLYTVG 119
                I++G+ +   D   V   L L  +  +   G  +  +    + PH  L   +T  
Sbjct: 66  QAGQVILDGKNIASLDTRHVARHLGLLPQSSQAPDGISVLDLVARGRYPHQKLLQQWTQA 125

Query: 120 YQ--IAEAMEVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGI 177
            +  +++AM+  G    + E   ++VD L                   SGG +QRV I +
Sbjct: 126 DKQAVSDAMQATG----VSELADRSVDAL-------------------SGGQRQRVWIAM 162

Query: 178 GISNNPRILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAV 237
            ++    +L+ DEPTT LD+  Q  +L+L + + +++  T++ + H+L      A  +  
Sbjct: 163 VLAQQTPLLLLDEPTTYLDIAHQIDLLELFSNLNQQHNHTLVAVLHDLNHACRYATHIIA 222

Query: 238 MYAGKIVEIGTVDQIFKNPLHPYTQGL 264
           M  GKIV  G   ++    L  +  G+
Sbjct: 223 MRDGKIVIQGKPREVITADLVEHVFGM 249


>pir||S76856 hypothetical protein - Synechocystis sp. (strain PCC 6803)
           >gi|1653858|dbj|BAA18768.1| (D90917) haemolysin
           secretion ATP-binding protein [Synechocystis sp.]
           Length = 733
           
 Score = 74.1 bits (179), Expect = 2e-12
 Identities = 75/251 (29%), Positives = 118/251 (46%), Gaps = 34/251 (13%)

Query: 5   PEPILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIE- 63
           P+  +  +N++  FY Y G VK IE +S  +  G+   L+G++GCGKS  ++ +T L   
Sbjct: 495 PQDDIDCQNIS--FY-YPGRVKLIEDLSVTIPGGKVVGLIGKSGCGKSTLAKILTGLYSV 551

Query: 64  SPGRIVEGQVLYYRDDGSVVDLLK----LSEEEIRKIRGNEIAYIFQDPHASLDPLYTVG 119
             G I  G   +   D S++ L K    +S++     R     +    P  +L+ + +  
Sbjct: 552 QAGEINIGN--HSLGDFSLICLRKQVVLVSQDAFFFHRSIIDNFRLSSPDITLEQVISA- 608

Query: 120 YQIAEAMEVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGI 179
            QIA+A E   +     E I  AV                     +SGG KQR+ I   I
Sbjct: 609 CQIAQAHEFVSQFPEQYETILGAVAA------------------NISGGQKQRLAIARAI 650

Query: 180 SNNPRILIADEPTTALDVTIQAQILD-LLNKMKEKYKATVILITHNLGVVAETADRVAVM 238
            N+P +LI DE T  LD   +A++L+ LL K + K   T ILI+H   V+   AD +  +
Sbjct: 651 VNDPAVLILDESTANLDPVTEAEVLNSLLTKRQGK---TTILISHRPKVI-NCADWIIFL 706

Query: 239 YAGKIVEIGTV 249
            +GK+    T+
Sbjct: 707 ESGKVKFSNTI 717


>gb|AAC71706.1| (AF061070) PtxA [Pseudomonas stutzeri]
           Length = 275
           
 Score = 74.1 bits (179), Expect = 2e-12
 Identities = 68/247 (27%), Positives = 112/247 (44%), Gaps = 27/247 (10%)

Query: 4   VPEPILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIE 63
           + + +L+V  L+V    Y G V A+   S    +GE   L+G +G GKS   R++ +L+ 
Sbjct: 6   IQDAVLRVDRLSV---VYPGGVTALRDTSIAFRRGEFTVLLGLSGAGKSTLLRSLNRLVT 62

Query: 64  SPGRIVEGQVLYYRDDGSVV-DLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQI 122
             G             GSV  +L +L      +      A IFQ  H  ++    +   +
Sbjct: 63  PTG-------------GSVTSELGELGSGSALRQHRRRTAMIFQH-HQLIERQSALANVL 108

Query: 123 AEAMEVHGKIKSI----KEGIQKAVDILKSVLIPDPA-RRVNNYPHELSGGMKQRVVIGI 177
              +  H  ++S+    +   + A+  L  V + D A  RV+    +LSGG +QRV I  
Sbjct: 109 TGRLAFHNTLRSLFPLPRADQEIALSCLARVGLADKALSRVD----KLSGGQQQRVGIAR 164

Query: 178 GISNNPRILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAV 237
            ++  P I++ADEP  +LD     ++L LL  + ++   T I+  H L      ADRV  
Sbjct: 165 ALAQQPAIILADEPVASLDPATSVRVLGLLRDICKEDGITAIVSLHQLEYARRFADRVVG 224

Query: 238 MYAGKIV 244
           +   +IV
Sbjct: 225 LADSQIV 231


>pir||T21268 hypothetical protein F22E10.3 - Caenorhabditis elegans
           >gi|3876293|emb|CAA91801.1| (Z67882) contains similarity
           to Pfam domain: PF00005 (ABC transporter), Score=438.6,
           E-value=1.7e-128, N=2; PF00664 (ABC transporter
           transmembrane region.), Score=275.4, E-value=2.3e-79,
           N=2~cDNA EST yk11d11.3 comes from this gene~cDNA EST
           yk11d11.5 co>
           Length = 1327
           
 Score = 73.4 bits (177), Expect = 4e-12
 Identities = 71/266 (26%), Positives = 121/266 (44%), Gaps = 44/266 (16%)

Query: 2   RKVPEPILQVRNLTVHF-YTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQ 60
           +++   + +V+   VHF Y      K +  ++  V  G + ALVG +GCGKS +   +T+
Sbjct: 420 KRLQNVVGRVKFENVHFRYPSRKDAKILNGLNLVVEPGTSVALVGHSGCGKSTSVGLLTR 479

Query: 61  LIESPGRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYT--- 117
           L E       G V     DG+  D+ +L+ E +R    N +  + Q+P    D ++    
Sbjct: 480 LYEPEA----GNVTI---DGT--DVRELNIEWLR----NTVGIVQQEPILFNDTIHNNLL 526

Query: 118 VG---------YQIAEAMEVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGG 168
           +G          ++ +    H  I+ + +G           LI D          +LSGG
Sbjct: 527 IGNPGSTRETMIEVCKMANAHDFIEKMPKGYD--------TLIGDGGV-------QLSGG 571

Query: 169 MKQRVVIGIGISNNPRILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVV 228
            KQRV I   +  +P++L+ DE T+ALD   ++ +   LN   +    T I+I H L  +
Sbjct: 572 QKQRVAIARTLIRDPKVLLLDEATSALDAQSESIVQSALNNASK--GRTTIMIAHRLSTI 629

Query: 229 AETADRVAVMYAGKIVEIGTVDQIFK 254
            E AD++     G IVE G  +++ +
Sbjct: 630 RE-ADKIVFFEKGVIVEAGNHEELVR 654


>pir||T40790 probable permease - fission yeast (Schizosaccharomyces pombe)
           >gi|4760347|emb|CAB42370.1| (AL049769) putative permease
           [Schizosaccharomyces pombe]
           Length = 726
           
 Score = 73.0 bits (176), Expect = 5e-12
 Identities = 69/254 (27%), Positives = 116/254 (45%), Gaps = 29/254 (11%)

Query: 4   VPEPILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIE 63
           V + IL  RN+   + T        + +SFD++ G   A+V  +G GKS  S+ + +   
Sbjct: 477 VGKAILSFRNVGFAYPTRPS-ASIFDNLSFDIHPGTNVAIVAPSGGGKSTISQLLLRFYA 535

Query: 64  -SPGRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQI 122
            S G+I+         DG  VD+   +  + R    +    + Q+P        T+G  I
Sbjct: 536 PSSGKILA--------DG--VDISTYNVHQWR----SHFGLVGQEPVLFSG---TIGENI 578

Query: 123 AEAMEVHGKIKSIKEGIQKAVDILK-SVLIPDPAR---RVNNYPHELSGGMKQRVVIGIG 178
           A     +GK  + +E I+ A      S ++  P +   +V     +LSGG KQR+ I   
Sbjct: 579 A-----YGKSNASQEEIEDAAKRANCSFVLSFPEKWSTQVGTRGLQLSGGQKQRIAIARA 633

Query: 179 ISNNPRILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVM 238
           +  NP  LI DE T+ALD   +  +   +  +      T I I H L  +   AD++ V+
Sbjct: 634 LLRNPAFLILDEATSALDGEAEVMVDKTIQSLMHNRSMTTITIAHKLATI-RRADQIIVV 692

Query: 239 YAGKIVEIGTVDQI 252
             GK++E G+ +++
Sbjct: 693 GDGKVLEQGSFERL 706


>pir||E70871 hypothetical protein Rv1458c - Mycobacterium tuberculosis  (strain
           H37RV) >gi|2791392|emb|CAA15988.1| (AL021184)
           hypothetical protein Rv1458c [Mycobacterium
           tuberculosis]
           Length = 313
           
 Score = 72.2 bits (174), Expect = 8e-12
 Identities = 60/251 (23%), Positives = 109/251 (42%), Gaps = 31/251 (12%)

Query: 5   PEPILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIES 64
           PE +L++R +   +    G + A+  +  DV+  E  AL+G  G GK+ T          
Sbjct: 8   PEVVLRLRGVCKRY----GSITAVSNLDLDVHDAEVMALLGPNGAGKTTTVE-------- 55

Query: 65  PGRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGYQIAE 124
              + EG   + R D   +++L L            I  + Q            GY  A 
Sbjct: 56  ---MCEG---FVRPDAGSIEVLGLDPITDNARLRARIGVMLQGGG---------GYPAAR 100

Query: 125 AMEVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGISNNPR 184
           A E+   + S          +L ++ + + AR        LSGG +QR+ +   +   P+
Sbjct: 101 AGEMLDLVASYAANPLDPHWLLDTLGLTEAARTTYR---RLSGGQQQRLALACALVGRPQ 157

Query: 185 ILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYAGKIV 244
           ++  DEPT  +D   +  + +L++ ++ +   TV+L TH+L    E ADR+ ++  G  V
Sbjct: 158 LVFLDEPTAGMDAHARVLVWELIDALR-RDGVTVVLTTHHLKEAEELADRLVIIDHGVTV 216

Query: 245 EIGTVDQIFKN 255
             GT  ++ ++
Sbjct: 217 AAGTPAELMRS 227


>gb|AAD43625.1|AF071410_1 (AF071410) ATP-binding cassette multidrug transport protein ATRC
           [Aspergillus nidulans]
           Length = 1284
           
 Score = 72.2 bits (174), Expect = 8e-12
 Identities = 73/257 (28%), Positives = 118/257 (45%), Gaps = 26/257 (10%)

Query: 5   PEPIL---QVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQL 61
           PE +L   ++ N+T  + T  GI   ++  S  V  G+  ALVG++G GKS     I  L
Sbjct: 374 PERVLGDVELENVTFSYPTRPGIT-VLDNFSLKVPAGKVTALVGQSGSGKST----IVGL 428

Query: 62  IESPGRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLY-TVGY 120
           +E       G +   R DG+++     SE  +  +R N +  + Q+P      ++  + Y
Sbjct: 429 LERWYNPTSGAI---RLDGNLI-----SELNVGWLRRN-VRLVQQEPVLFQGSVFDNIRY 479

Query: 121 QIAEAMEVHGKIKSIKEGIQKAVDILK-----SVLIPDPARRVNNYPHELSGGMKQRVVI 175
            +      +   +   E +Q+A  +       S L       +      LSGG KQRV I
Sbjct: 480 GLVGTPWENASREEQMERVQEAAKLAYAHEFISELTDGYDTLIGERGGLLSGGQKQRVAI 539

Query: 176 GIGISNNPRILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRV 235
              + + P++L+ DE T+ALD   +  +   L+K  E    T I+I H L  + + AD +
Sbjct: 540 ARSVVSQPKVLLLDEATSALDPHAETIVQKALDKAAE--GRTTIVIAHKLATIRK-ADNI 596

Query: 236 AVMYAGKIVEIGTVDQI 252
            VM  G IVE GT + +
Sbjct: 597 VVMSKGHIVEQGTHESL 613


>pir||H82381 toxin secretion ATP-binding protein VCA1084 [imported] - Vibrio
           cholerae (group O1 strain N16961)
           >gi|9658530|gb|AAF96977.1| (AE004433) toxin secretion
           ATP-binding protein [Vibrio cholerae]
           Length = 704
           
 Score = 72.2 bits (174), Expect = 8e-12
 Identities = 78/275 (28%), Positives = 125/275 (45%), Gaps = 37/275 (13%)

Query: 2   RKVPEPILQ--VRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAIT 59
           R +  PI+Q  +    V F+     + ++  +S  ++ GE  A++G  G GK+   R I 
Sbjct: 458 RYIHRPIIQGKIELDRVTFHYPNSPIASVRDLSLTIHPGEKVAIIGRIGSGKTTLERLIM 517

Query: 60  QLIESPGRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDP---HASLDPLY 116
            L +      EG V    DD    D+ +L   +IR+     I  + QD    + S+    
Sbjct: 518 GLYKP----TEGHVRI--DD---TDISQLHHIDIRR----NIGCVPQDSVLFYGSIRDNI 564

Query: 117 TVGYQIAEAMEVHGKIKSIKEGIQKAVDILKSVLIPDPA---RRVNNYPHELSGGMKQRV 173
           T+G  +++  EV      +    +  V +       DPA   R+V      LSGG +Q V
Sbjct: 565 TLGRPLSDDREV------MDAANRAGVTVFTQ---QDPAGLERQVGEGGMLLSGGQRQSV 615

Query: 174 VIGIGISNNPRILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETAD 233
            I       P +L+ DEPT+A+D   +  I   L+++K     T+ILITH   ++ +  D
Sbjct: 616 SIARAFLGRPPVLLMDEPTSAMDNRSEMHIKQQLSQLKP--SETLILITHKTSML-DVVD 672

Query: 234 RVAVMYAGKIVEIGTVDQIFKNPLHPYTQGLLRAV 268
           RV VM  G I+  G   ++    L+   QG +RAV
Sbjct: 673 RVIVMEKGCIIADGPKHEV----LNDLRQGNVRAV 703


>emb|CAB39282.1| (AJ133704) NatA protein [Anabaena sp.]
           Length = 260
           
 Score = 71.4 bits (172), Expect = 1e-11
 Identities = 61/257 (23%), Positives = 118/257 (45%), Gaps = 20/257 (7%)

Query: 5   PEPILQVRNLTVHFYTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQLIES 64
           P P+L    L   F    G +KA+++   +V +G    L+G  G GK+     ++  I  
Sbjct: 8   PLPLLAASGLCKSF----GGIKAVQEARIEVAQGSITGLIGPNGAGKTTLFNLLSNFI-- 61

Query: 65  PGRIVEGQVLYYRDDGSVVDLLKLSE-EEIRKIRGNEIAYIFQDPHASLDPLYTVGYQIA 123
             R  +G+V++   DG  +  L+  +  +   +R  ++A          + L     Q  
Sbjct: 62  --RPDKGRVIF---DGEPIQQLQPHQIAQQGMVRTFQVARTLSRLSVLENMLLAAQKQTG 116

Query: 124 E-----AMEVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIG 178
           E      ++    +K  K+  ++A+ +L+SV +   A++   Y   LSGG ++ + +G  
Sbjct: 117 ENFWQVQLQPQVVVKEEKQLQEQAMFLLESVGL---AKKAYEYAGGLSGGQRKLLEMGRA 173

Query: 179 ISNNPRILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVM 238
           +  NP++++ DEP   ++  +   I D +     +   T ++I HN+ V+    DRV V+
Sbjct: 174 LMTNPKLILLDEPAAGVNPRLIDDICDRILTWNRQDGMTFLIIEHNMDVIMSLCDRVWVL 233

Query: 239 YAGKIVEIGTVDQIFKN 255
             G+ +  GT  +I  N
Sbjct: 234 AEGQNLADGTPAEIQTN 250


  Database: ./suso.pep
    Posted date:  Jul 6, 2001  5:57 PM
  Number of letters in database: 840,471
  Number of sequences in database:  2977
  
  Database: /banques/blast2/nr.pep
    Posted date:  Dec 14, 2000 12:46 PM
  Number of letters in database: 188,266,275
  Number of sequences in database:  595,510
  
Lambda     K      H
   0.319    0.140    0.402 

Gapped
Lambda     K      H
   0.270   0.0470    0.230 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 126462248
Number of Sequences: 2977
Number of extensions: 5366348
Number of successful extensions: 22324
Number of sequences better than 1.0e-10: 1239
Number of HSP's better than  0.0 without gapping: 420
Number of HSP's successfully gapped in prelim test: 819
Number of HSP's that attempted gapping in prelim test: 19574
Number of HSP's gapped (non-prelim): 1529
length of query: 329
length of database: 189,106,746
effective HSP length: 55
effective length of query: 274
effective length of database: 156,189,961
effective search space: 42796049314
effective search space used: 42796049314
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 165 (68.7 bits)