BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB1875 (dppF-2) DE:dipeptide ABC transporter, ATP-binding
protein (dppF)
(326 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||G75117 dipeptide abc transporter, ATP-binding protein (dppf... 675 0.0
pir||G71014 probable dipeptide transport ATP-binding protein dpp... 652 0.0
pir||A72618 probable oligopeptide transport ATP-binding protein ... 436 e-121
pir||C72371 oligopeptide ABC transporter, ATP-binding protein - ... 353 1e-96
pir||F71211 probable oligopeptide transport ATP-binding protein ... 353 1e-96
sp|P42065|APPF_BACSU OLIGOPEPTIDE TRANSPORT ATP-BINDING PROTEIN ... 351 5e-96
pir||F75026 oligopeptide transport ATP-binding protein appf. PAB... 351 7e-96
pir||B72424 oligopeptide ABC transporter, ATP-binding protein - ... 350 1e-95
pir||G75202 dipeptide abc transporter, dipeptide-binding protein... 349 3e-95
dbj|BAB07364.1| (AP001519) oligopeptide ABC transporter (ATP-bin... 347 8e-95
pir||T34760 oligopeptide ABC transporter ATP-binding protein - S... 347 8e-95
pir||B72300 oligopeptide ABC transporter, ATP-binding protein - ... 347 1e-94
dbj|BAB03746.1| (AP001507) oligopeptide ABC transporter (ATP-bin... 341 8e-93
pir||G75380 peptide ABC transporter, ATP-binding protein - Deino... 333 1e-90
dbj|BAB04070.1| (AP001508) oligopeptide ABC transporter (ATP-bin... 329 3e-89
pir||F71130 probable oligopeptide transport ATP-binding protein ... 327 1e-88
pir||H72366 oligopeptide ABC transporter, ATP-binding protein - ... 327 1e-88
pir||A72216 oligopeptide ABC transporter, ATP-binding protein - ... 324 8e-88
pir||B69856 oligopeptide transport ATP-binding protein homolog y... 320 2e-86
pir||C72289 oligopeptide ABC transporter, ATP-binding protein - ... 320 2e-86
sp|Q53194|Y4TS_RHISN PROBABLE PEPTIDE ABC TRANSPORTER ATP-BINDIN... 319 3e-86
gb|AAG20448.1| (AE005117) oligopeptide ABC transporter ATP-bindi... 315 5e-85
gb|AAA62693.1| (M57689) sporulation protein [Bacillus subtilis] ... 314 9e-85
sp|P24137|OPPF_BACSU OLIGOPEPTIDE TRANSPORT ATP-BINDING PROTEIN ... 313 2e-84
emb|CAA39791.1| (X56347) OppF [Bacillus subtilis] 312 4e-84
emb|CAC05751.1| (AL391751) putative peptide transport system ATP... 310 1e-83
gb|AAG20587.1| (AE005129) dipeptide ABC transporter ATP-binding;... 309 2e-83
gb|AAC64256.1| (AF042861) putative OppF [Treponema denticola] 309 3e-83
gb|AAG22038.1|AF305387_5 (AF305387) OppF [Bacillus thuringiensis] 307 1e-82
sp|P45094|DPPF_HAEIN DIPEPTIDE TRANSPORT ATP-BINDING PROTEIN DPP... 295 5e-79
pir||G71211 probable oligopeptide transport ATP-binding protein ... 294 1e-78
pir||C72536 probable oligopeptide transport ATP-binding protein ... 292 3e-78
pir||F83082 probable ATP-binding component of ABC dipeptide tran... 292 5e-78
pir||G75026 oligopeptide transport ATP-binding protein appd. PAB... 292 5e-78
gi|11499360 dipeptide ABC transporter, ATP-binding protein (dppF... 292 5e-78
pir||C72720 probable oligopeptide transport ATP-binding protein ... 291 6e-78
gb|AAG20461.1| (AE005118) oligopeptide ABC transporter ATP-bindi... 291 8e-78
sp|P08007|OPPF_SALTY OLIGOPEPTIDE TRANSPORT ATP-BINDING PROTEIN ... 290 1e-77
sp|P37313|DPPF_ECOLI DIPEPTIDE TRANSPORT ATP-BINDING PROTEIN DPP... 290 1e-77
gb|AAA23706.1| (L08399) peripheral membrane protein [Escherichia... 290 2e-77
sp|P77737|OPPF_ECOLI OLIGOPEPTIDE TRANSPORT ATP-BINDING PROTEIN ... 289 4e-77
pir||F82242 oligopeptide ABC transporter, ATP-binding protein VC... 287 2e-76
gb|AAF73094.1|AF103793_5 (AF103793) ATPase OppF [Listeria monocy... 284 1e-75
dbj|BAB07358.1| (AP001519) oligopeptide ABC transporter (ATP-bin... 283 2e-75
gb|AAK42735.1| Dipeptide ABC transporter ATP binding protein (dp... 282 3e-75
pir||F70141 probable oligopeptide transport ATP-binding protein ... 280 1e-74
sp|P45051|OPPF_HAEIN OLIGOPEPTIDE TRANSPORT ATP-BINDING PROTEIN ... 279 3e-74
dbj|BAA94703.1| (AB026907) dipeptide transporter DppE homolog [O... 278 6e-74
sp|P75796|YLIA_ECOLI HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 271 1e-71
pir||E64820 probable oligopeptide transport protein - Escherichi... 271 1e-71
dbj|BAA35517.1| (D90720) Hypothetical ABC transporter ATP-bindin... 271 1e-71
pir||F75202 dipeptide abc transporter, dipeptide-binding protein... 268 6e-71
pir||D72371 oligopeptide ABC transporter, ATP-binding protein - ... 266 3e-70
emb|CAC11415.1| (AL445063) sporulation protein (spo0KD) related ... 265 4e-70
pir||C72300 oligopeptide ABC transporter, ATP-binding protein - ... 265 4e-70
gb|AAK41514.1| Oligo/dipeptide transport, ATP binding protein (d... 264 1e-69
pir||D75142 oligopeptide transport ATP-binding protein appf PAB0... 262 4e-69
pir||F71163 probable oligopeptide transport ATP-binding protein ... 261 8e-69
pir||H72215 oligopeptide ABC transporter, ATP-binding protein - ... 261 8e-69
pir||E72536 probable oligopeptide transport ATP-binding protein ... 260 1e-68
pir||T45281 probable ABC transporter intracellular ATPase chain ... 259 2e-68
pir||C72452 probable peptide transport ATP-binding protein APE22... 258 5e-68
gi|10954710 hypothetical ABC-transporter gene~similar to moaD ge... 257 9e-68
pir||A72452 probable peptide transport ATP-binding protein APE22... 257 2e-67
pir||F71014 probable dipeptide transport ATP-binding protein dpp... 256 4e-67
pir||C72424 oligopeptide ABC transporter, ATP-binding protein - ... 256 4e-67
gb|AAG09260.1| (AF176664) EppD [EDTA-degrading bacterium BNC1] 252 3e-66
pir||H75117 peptide abc transporter ATP-binding protein PAB1874 ... 252 5e-66
pir||D83419 probable ATP-binding component of ABC transporter PA... 251 7e-66
emb|CAC11411.1| (AL445063) oligopeptide transport ATP-binding pr... 251 7e-66
pir||H82355 peptide ABC transporter, ATP-binding protein VC0170 ... 250 2e-65
sp|Q11040|YC81_MYCTU HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 247 1e-64
sp|P18766|AMIF_STRPN OLIGOPEPTIDE TRANSPORT ATP-BINDING PROTEIN ... 247 2e-64
pir||E75068 dipeptide abc transporter, ATP-binding protein (dppf... 247 2e-64
sp|Q07734|OPPF_LACLA OLIGOPEPTIDE TRANSPORT ATP-BINDING PROTEIN ... 246 2e-64
gb|AAG22037.1|AF305387_4 (AF305387) OppD [Bacillus thuringiensis] 246 2e-64
pir||C82442 probable peptide ABC transporter, ATP-binding protei... 246 3e-64
emb|CAC16447.1| (AL450165) putative oligopeptide ABC transporter... 245 4e-64
sp|P77622|YDDO_ECOLI HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 245 7e-64
pir||T35983 probable peptide transport ATP-binding protein - Str... 244 9e-64
pir||A72371 oligopeptide ABC transporter, ATP-binding protein - ... 244 9e-64
pir||D72289 oligopeptide ABC transporter, ATP-binding protein - ... 244 9e-64
gb|AAF73093.1|AF103793_4 (AF103793) ATPase OppD [Listeria monocy... 244 1e-63
emb|CAA61526.1| (X89237) oligopeptidepermease [Streptococcus pyo... 242 5e-63
gb|AAG32327.1| (AF305548) oligopeptide permease [Streptococcus p... 242 5e-63
pir||F72617 probable dipeptide transport system ATP-binding prot... 240 2e-62
gi|10955083 agaD [Agrobacterium tumefaciens] >gi|11346288|pir||T... 239 3e-62
pir||F72428 oligopeptide ABC transporter, ATP-binding protein - ... 238 5e-62
dbj|BAB03747.1| (AP001507) oligopeptide ABC transporter (ATP-bin... 236 3e-61
dbj|BAA03322.1| (D14438) ATP-binding protein [Synechococcus elon... 236 3e-61
sp|P26905|DPPD_BACSU DIPEPTIDE TRANSPORT ATP-BINDING PROTEIN DPP... 235 6e-61
pir||B83389 probable ATP-binding component of ABC transporter PA... 235 6e-61
gb|AAK41513.1| Oligo/dipeptide transport, ATP binding protein (d... 234 1e-60
pir||S75333 oligopeptide transport protein oppF - Synechocystis ... 234 1e-60
pir||F64557 dipeptide transport ATP-binding protein dppF - Helic... 233 2e-60
pir||A71952 dipeptide transport system ATP-binding protein - Hel... 233 3e-60
pir||A72282 oligopeptide ABC transporter, ATP-binding protein - ... 233 3e-60
gi|11499359 dipeptide ABC transporter, ATP-binding protein (dppD... 232 4e-60
pir||C72421 oligopeptide ABC transporter, ATP-binding protein - ... 231 7e-60
pir||E71130 probable oligopeptide transport ATP-binding protein ... 231 9e-60
pir||B82393 ABC transporter, ATP-binding protein VCA0977 [import... 229 4e-59
gb|AAA62691.1| (M57689) sporulation protein [Bacillus subtilis] 228 6e-59
pir||D38447 sporulation initiation protein spo0KD - Bacillus sub... 228 6e-59
sp|P24136|OPPD_BACSU OLIGOPEPTIDE TRANSPORT ATP-BINDING PROTEIN ... 228 6e-59
pir||H75380 peptide ABC transporter, ATP-binding protein - Deino... 228 1e-58
gb|AAG20449.1| (AE005117) oligopeptide ABC transporter; OppD2 [H... 227 1e-58
gi|10955092 moaD [Agrobacterium tumefaciens] >gi|11278927|pir||T... 225 5e-58
pir||A70482 ABC transporter - Aquifex aeolicus >gi|2984331|gb|AA... 225 5e-58
gb|AAC43497.1| (U35442) PepF [Rhodobacter sphaeroides] 225 7e-58
pir||D71163 probable oligopeptide transport ATP-binding protein ... 225 7e-58
sp|P42064|APPD_BACSU OLIGOPEPTIDE TRANSPORT ATP-BINDING PROTEIN ... 224 1e-57
pir||T34759 oligopeptide ABC transporter ATP-binding protein - S... 224 1e-57
sp|P33916|YEJF_ECOLI HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 222 6e-57
sp|Q53193|Y4TR_RHISN PROBABLE PEPTIDE ABC TRANSPORTER ATP-BINDIN... 220 1e-56
pir||T45280 probable ABC transporter intracellular ATPase chain ... 220 1e-56
dbj|BAB04069.1| (AP001508) oligopeptide ABC transporter (ATP-bin... 220 1e-56
pir||A72284 oligopeptide ABC transporter, ATP-binding protein - ... 220 2e-56
pir||C75142 oligopeptide transport ATP-binding protein appf PAB0... 220 2e-56
pir||E72393 oligopeptide ABC transporter, ATP-binding protein - ... 219 3e-56
pir||D82301 peptide ABC transporter, ATP-binding protein VC0616 ... 219 3e-56
pir||E82301 peptide ABC transporter, ATP-binding protein VC0617 ... 219 3e-56
pir||F75068 dipeptide abc transporter, ATP-binding protein (dppd... 219 4e-56
gb|AAC64255.1| (AF042861) putative OppD [Treponema denticola] 218 7e-56
pir||G72283 oligopeptide ABC transporter, ATP-binding protein - ... 218 7e-56
gb|AAK43155.1| Maltose ABC transporter, ATP-binding protein [Sul... 217 1e-55
pir||B72421 oligopeptide ABC transporter, ATP-binding protein - ... 217 1e-55
gb|AAC24218.1| (AF055482) ABC transporter [Thermotoga neapolitana] 217 1e-55
gb|AAK42736.1| Dipeptide ABC transporter ATP binding protein (dp... 217 1e-55
dbj|BAA15129.1| (D90788) Dipeptide transport ATP-binding protein... 216 3e-55
pir||B72282 oligopeptide ABC transporter, ATP-binding protein - ... 215 6e-55
emb|CAC05750.1| (AL391751) putative peptide transport system ATP... 215 6e-55
gb|AAG10493.1|AF279106_55 (AF279106) predicted ABC transporter A... 214 1e-54
pir||D72393 oligopeptide ABC transporter, ATP-binding protein - ... 210 1e-53
emb|CAC11410.1| (AL445063) probable sporulation protein (spo0KD)... 210 1e-53
dbj|BAB07359.1| (AP001519) oligopeptide ABC transporter (ATP-bin... 209 3e-53
pir||T03432 probable transport protein accC - Agrobacterium tume... 208 6e-53
dbj|BAB07365.1| (AP001519) oligopeptide ABC transporter (ATP-bin... 207 2e-52
sp|P04285|OPPD_SALTY OLIGOPEPTIDE TRANSPORT ATP-BINDING PROTEIN ... 203 2e-51
pir||QREBOT oligopeptide transport protein oppD - Salmonella typ... 200 2e-50
pir||F71483 probable dipeptide transport - Chlamydia trachomatis... 199 4e-50
pir||T35982 probable peptide transport ATP-binding protein - Str... 199 5e-50
gi|10954942 Probable accC [Agrobacterium tumefaciens] >gi|649829... 198 6e-50
pir||F72049 peptide ABC transporter, ATP-binding protein CP0065 ... 198 8e-50
gb|AAD48154.1|AF086618_1 (AF086618) ABC transporter homolog [Loo... 198 8e-50
sp|P45052|OPPD_HAEIN OLIGOPEPTIDE TRANSPORT ATP-BINDING PROTEIN ... 197 1e-49
gb|AAK42790.1| ABC transporter, ATP binding protein [Sulfolobus ... 197 2e-49
dbj|BAA14778.1| (D90763) Oligopeptide transport ATP-binding prot... 196 2e-49
sp|P76027|OPPD_ECOLI OLIGOPEPTIDE TRANSPORT ATP-BINDING PROTEIN ... 196 2e-49
sp|P18765|AMIE_STRPN OLIGOPEPTIDE TRANSPORT ATP-BINDING PROTEIN ... 195 5e-49
pir||E82242 oligopeptide ABC transporter, ATP-binding protein VC... 195 7e-49
pir||T03431 probable transport protein accB - Agrobacterium tume... 194 9e-49
pir||G72049 peptide ABC transporter, ATP-binding protein CP0064 ... 194 9e-49
emb|CAA61525.1| (X89237) oligopeptidepermease [Streptococcus pyo... 193 3e-48
pir||D72720 probable oligopeptide transport ATP-binding protein ... 192 6e-48
gi|10954941 Probable accB [Agrobacterium tumefaciens] >gi|649829... 191 8e-48
pir||C81746 peptide ABC transporter, ATP-binding protein TC0062 ... 191 8e-48
emb|CAA68076.1| (X99740) oligopeptide transport ATP-binding prot... 191 1e-47
pir||E71957 ABC transporter, ATP-binding protein - Helicobacter ... 189 4e-47
pir||B64551 oligopeptide ABC transporter, ATP-binding protein - ... 185 8e-46
gb|AAK41518.1| Oligo/dipeptide transport, ATP binding protein . ... 183 2e-45
sp|P47325|OPPD_MYCGE OLIGOPEPTIDE TRANSPORT ATP-BINDING PROTEIN ... 183 2e-45
dbj|BAA15988.1| (D90849) Oligopeptide transport ATP-binding prot... 182 5e-45
pir||E83082 probable ATP-binding component of ABC transporter PA... 181 1e-44
sp|P77268|YDDP_ECOLI HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 179 5e-44
pir||E70141 oligopeptide transport ATP-binding protein oppD - Ly... 178 6e-44
sp|P36637|SAPF_ECOLI PEPTIDE TRANSPORT SYSTEM ATP-BINDING PROTEI... 176 3e-43
pir||JC5009 nucleotide-binding protein D - Methanosarcina mazei ... 175 7e-43
gb|AAK41519.1| Oligo/dipeptide transport, ATP binding protein . ... 175 9e-43
emb|CAC12446.1| (AL445067) probable oligopeptide ABC transport s... 174 2e-42
gb|AAK43146.1| ABC transporter, ATP binding protein [Sulfolobus ... 172 4e-42
sp|P36638|SAPF_SALTY PEPTIDE TRANSPORT SYSTEM ATP-BINDING PROTEI... 172 4e-42
gb|AAG20460.1| (AE005118) oligopeptide ABC transporter ATP-bindi... 172 6e-42
sp|Q07733|OPPD_LACLA OLIGOPEPTIDE TRANSPORT ATP-BINDING PROTEIN ... 171 1e-41
dbj|BAA94702.1| (AB026907) dipeptide transporter DppD homolog [O... 171 1e-41
sp|P50980|OPPD_LACLC OLIGOPEPTIDE TRANSPORT ATP-BINDING PROTEIN ... 171 1e-41
sp|P75552|OPPD_MYCPN OLIGOPEPTIDE TRANSPORT ATP-BINDING PROTEIN ... 170 2e-41
emb|CAA10913.1| (AJ222649) sapF [Erwinia chrysanthemi] 170 2e-41
gb|AAK42789.1| ABC transporter, ATP binding protein [Sulfolobus ... 168 1e-40
emb|CAC16446.1| (AL450165) putative oligopeptide ABC transporter... 168 1e-40
gb|AAA50595.1| (U08186) ATP-dependent oligopeptide transport pro... 165 6e-40
pir||E71545 probable oligopeptide transport ATPase - Chlamydia t... 150 2e-35
gb|AAF73561.1| (AE002315) peptide ABC transporter, ATP-binding p... 149 4e-35
sp|P16678|PHNK_ECOLI PHOSPHONATES TRANSPORT ATP-BINDING PROTEIN ... 136 3e-31
pir||S56325 hisP protein-like nucleotide-binding protein phnK - ... 136 3e-31
pir||G83607 polyamine transport protein PotG PA0302 [imported] -... 136 5e-31
sp|P07109|HISP_ECOLI HISTIDINE TRANSPORT ATP-BINDING PROTEIN HIS... 134 1e-30
pir||A27835 histidine transport protein hisP - Escherichia coli ... 134 1e-30
pir||A70180 spermidine/putrescine ABC transporter, ATP-binding p... 133 2e-30
emb|CAB76078.1| (AL157953) putative ABC transporter ATP-binding ... 130 3e-29
gb|AAC05643.1| (AF033673) unknown [Pseudomonas marginalis pv. al... 128 8e-29
sp|P55662|Y4TH_RHISN PROBABLE AMINO-ACID ABC TRANSPORTER ATP-BIN... 127 2e-28
sp|Q52815|AAPP_RHILV GENERAL L-AMINO ACID TRANSPORT ATP-BINDING ... 125 9e-28
dbj|BAB04188.1| (AP001508) phosphonates transport system [Bacill... 125 9e-28
pir||B75082 phosphate abc transporter, ATP-binding protein (pstb... 124 1e-27
pir||H70682 probable cysA - Mycobacterium tuberculosis (strain H... 120 2e-26
dbj|BAB06933.1| (AP001518) ABC transporter (ATP-binding protein)... 116 3e-25
sp|P55453|Y4FO_RHISN PUTATIVE ABC TRANSPORTER ATP-BINDING PROTEI... 113 2e-24
gb|AAK41516.1| Oligo/dipeptide transport, ATP binding protein . ... 113 4e-24
pir||T34822 ABC-transporter ATP binding protein - Streptomyces c... 112 7e-24
sp|P35116|NOCP_AGRTU NOPALINE PERMEASE ATP-BINDING PROTEIN P >gi... 110 3e-23
sp|P45247|LOLD_HAEIN LIPOPROTEIN RELEASING SYSTEM ATP-BINDING PR... 109 6e-23
gi|10954825 Probable nocP gene [Agrobacterium tumefaciens] >gi|6... 108 1e-22
sp|P57031|LOLD_NEIMB LIPOPROTEIN RELEASING SYSTEM ATP-BINDING PR... 106 3e-22
sp|P57030|LOLD_NEIMA LIPOPROTEIN RELEASING SYSTEM ATP-BINDING PR... 106 4e-22
emb|CAC11370.1| (AL445063) gliding motility protein related [The... 106 4e-22
gb|AAG19353.1| (AE005030) spermidine/putrescine ABC transporter ... 106 5e-22
sp|P55604|Y4OS_RHISN PROBABLE ABC TRANSPORTER ATP-BINDING PROTEI... 105 9e-22
sp|P57383|LOLD_BUCAI LIPOPROTEIN RELEASING SYSTEM ATP-BINDING PR... 105 9e-22
pir||T45204 probable sugar ABC transporter ugpC [imported] - Myc... 104 1e-21
sp|P75957|YCFV_ECOLI HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 103 3e-21
dbj|BAA35937.1| (D90747) Heterocyst maturation protein (devA) ho... 103 3e-21
pir||S75960 nitrate transport protein D-1 - Synechocystis sp. (s... 103 3e-21
pir||B64458 high-affinity branched-chain amino acid transport AT... 102 6e-21
sp|P46342|YQGK_BACSU HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 102 8e-21
gb|AAC24216.1| (AF055482) ABC transporter [Thermotoga neapolitana] 101 1e-20
dbj|BAB03992.1| (AP001507) ABC transporter (ATP-binding protein)... 101 2e-20
gb|AAK40988.1| ABC transporter, ATP binding protein. [Sulfolobus... 100 3e-20
emb|CAB57615.1| (Y18930) ABC transporter/ATP-binding protein [Su... 100 3e-20
dbj|BAB07698.1| (AP001520) ABC transporter (ATP-binding protein)... 100 4e-20
gb|AAK42315.1| ABC transporter, ATP binding protein. [Sulfolobus... 99 5e-20
pir||S74048 probable daunorubicin resistance protein - Sulfolobu... 99 5e-20
gb|AAK40417.1| ABC transporter, ATP binding protein [Sulfolobus ... 99 7e-20
pir||S75436 hypothetical protein c05019 - Sulfolobus solfataricu... 99 7e-20
pir||C72568 probable ATP-binding transport protein APE1829 - Aer... 98 1e-19
sp|Q58418|PSTB_METJA PROBABLE PHOSPHATE TRANSPORT ATP-BINDING PR... 97 3e-19
pir||A70158 ABC transporter, ATP-binding protein homolog - Lyme ... 97 3e-19
pir||F72485 probable high-affinity branched-chain amino acid tra... 97 3e-19
pir||D81263 probable ABC transport system ATP-binding protein Cj... 96 7e-19
pir||S74384 high-affinity branched-chain amino acid transport AT... 94 2e-18
gb|AAG34709.1|AF320001_2 (AF320001) putative ATP binding protein... 94 3e-18
gb|AAC67220.1| (U78968) ATPase protein DppD [Streptococcus pyoge... 93 4e-18
gb|AAG32538.1| (AY005472) SalT [Streptococcus salivarius] 93 5e-18
gb|AAD45713.1|AF160811_1 (AF160811) L-arabinose transport, ATP b... 92 6e-18
pir||E83288 probable ATP-binding component of ABC transporter PA... 92 8e-18
pir||D70184 probable ribose/galactose ABC transporter mglA - Lym... 91 1e-17
pir||E82504 phosphate ABC transporter, ATP-binding protein VCA00... 91 1e-17
gb|AAB40787.1| (U82598) ferric enterobactin transport ATP-bindin... 89 1e-16
sp|P23878|FEPC_ECOLI FERRIC ENTEROBACTIN TRANSPORT ATP-BINDING P... 89 1e-16
gb|AAF43494.1|AF130119_1 (AF130119) oligopeptide permease D [Myc... 89 1e-16
pir||S16298 ferric enterobactin transport protein fepC - Escheri... 88 1e-16
pir||E72314 ribose ABC transporter, ATP-binding protein - Thermo... 88 1e-16
pir||A75083 ATP-binding transport protein PAB1668 - Pyrococcus a... 88 1e-16
pir||D75308 sugar ABC transportor, ATP-binding protein - Deinoco... 88 1e-16
gb|AAF65552.1|AF249879_1 (AF249879) liver bile salt export pump ... 88 2e-16
emb|CAB95741.1| (AJ276960) putative ABC transporter [Staphylococ... 87 3e-16
gb|AAD16030.1| (AF082183) ABC transporter MutF [Streptococcus mu... 86 5e-16
gb|AAD44229.1|AF143772_35 (AF143772) DrrA [Mycobacterium avium] 86 6e-16
pir||S76273 hypothetical protein - Synechocystis sp. (strain PCC... 85 1e-15
pir||B83354 probable ATP-binding component of ABC transporter PA... 85 1e-15
pir||T44565 probable ATP-dependent transport protein [imported] ... 84 2e-15
sp|Q55791|Y075_SYNY3 PROBABLE ATP-DEPENDENT TRANSPORTER SLR0075 ... 83 4e-15
gb|AAD20382.1| (AF125999) daunorubicin resistance protein A [Myc... 83 5e-15
pir||G72290 branched chain amino acid ABC transporter, ATP-bindi... 81 2e-14
dbj|BAB07160.1| (AP001518) L-arabinose ABC transporter (ATP-bind... 81 2e-14
>pir||G75117 dipeptide abc transporter, ATP-binding protein (dppf) PAB1875 -
Pyrococcus abyssi (strain Orsay)
>gi|5458167|emb|CAB49656.1| (AJ248285) dipeptide ABC
transporter, ATP-binding protein (dppF) [Pyrococcus
abyssi]
Length = 326
Score = 675 bits (1722), Expect = 0.0
Identities = 326/326 (100%), Positives = 326/326 (100%)
Query: 1 MTETVLKVENLKKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTI 60
MTETVLKVENLKKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTI
Sbjct: 1 MTETVLKVENLKKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTI 60
Query: 61 LRLIEPTDGKIIFMGKDVTKLKGEELKWFRRKAQIMFQDPYSSLDPRQTVFQIIMEPVKF 120
LRLIEPTDGKIIFMGKDVTKLKGEELKWFRRKAQIMFQDPYSSLDPRQTVFQIIMEPVKF
Sbjct: 61 LRLIEPTDGKIIFMGKDVTKLKGEELKWFRRKAQIMFQDPYSSLDPRQTVFQIIMEPVKF 120
Query: 121 HGIQVDDPEEFVIRLLESVGLNEMHLYRYPHEFSGGQRQRIALARLLALKPEFIVLDEPT 180
HGIQVDDPEEFVIRLLESVGLNEMHLYRYPHEFSGGQRQRIALARLLALKPEFIVLDEPT
Sbjct: 121 HGIQVDDPEEFVIRLLESVGLNEMHLYRYPHEFSGGQRQRIALARLLALKPEFIVLDEPT 180
Query: 181 SALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVGPADRI 240
SALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVGPADRI
Sbjct: 181 SALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVGPADRI 240
Query: 241 FENPLHPYTQMLFSAIPIPDPDLAREMKKKRMKVTGEPPSPINPPKGCRFHPRCPYAKAG 300
FENPLHPYTQMLFSAIPIPDPDLAREMKKKRMKVTGEPPSPINPPKGCRFHPRCPYAKAG
Sbjct: 241 FENPLHPYTQMLFSAIPIPDPDLAREMKKKRMKVTGEPPSPINPPKGCRFHPRCPYAKAG 300
Query: 301 LCDKEEPPMVEVEKDHYVACWLYAKA 326
LCDKEEPPMVEVEKDHYVACWLYAKA
Sbjct: 301 LCDKEEPPMVEVEKDHYVACWLYAKA 326
>pir||G71014 probable dipeptide transport ATP-binding protein dppF - Pyrococcus
horikoshii >gi|3257836|dbj|BAA30519.1| (AP000006) 329aa
long hypothetical dipeptide transport ATP-binding
protein dppF [Pyrococcus horikoshii]
Length = 329
Score = 652 bits (1664), Expect = 0.0
Identities = 309/326 (94%), Positives = 321/326 (97%)
Query: 1 MTETVLKVENLKKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTI 60
M E VLKVENLKKYFP+RGL RT+GWVKAVDGVSFEI +GETFGLVGESGCGKTTTGRTI
Sbjct: 4 MPEPVLKVENLKKYFPVRGLLRTVGWVKAVDGVSFEIYKGETFGLVGESGCGKTTTGRTI 63
Query: 61 LRLIEPTDGKIIFMGKDVTKLKGEELKWFRRKAQIMFQDPYSSLDPRQTVFQIIMEPVKF 120
LRLIEPTDG+IIFMGKDVTKLKG ELKWFRRKAQIMFQDPYSSLDPRQTVFQIIMEPV+F
Sbjct: 64 LRLIEPTDGRIIFMGKDVTKLKGNELKWFRRKAQIMFQDPYSSLDPRQTVFQIIMEPVRF 123
Query: 121 HGIQVDDPEEFVIRLLESVGLNEMHLYRYPHEFSGGQRQRIALARLLALKPEFIVLDEPT 180
HGIQVDDPEEFVI+LLESVGLNEMHLYRYPHEFSGGQRQRIALARLLALKPEFIVLDEPT
Sbjct: 124 HGIQVDDPEEFVIKLLESVGLNEMHLYRYPHEFSGGQRQRIALARLLALKPEFIVLDEPT 183
Query: 181 SALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVGPADRI 240
SALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVGPAD++
Sbjct: 184 SALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVGPADKV 243
Query: 241 FENPLHPYTQMLFSAIPIPDPDLAREMKKKRMKVTGEPPSPINPPKGCRFHPRCPYAKAG 300
FENPLHPYTQMLFSAIPIPDPD+AREMKKKRMKVTGEPPSP+NPPKGCRFHPRCPYAKAG
Sbjct: 244 FENPLHPYTQMLFSAIPIPDPDIAREMKKKRMKVTGEPPSPVNPPKGCRFHPRCPYAKAG 303
Query: 301 LCDKEEPPMVEVEKDHYVACWLYAKA 326
LCDK+EPP+VEVEKDHYVACWLYAKA
Sbjct: 304 LCDKKEPPLVEVEKDHYVACWLYAKA 329
>pir||A72618 probable oligopeptide transport ATP-binding protein APE1402 -
Aeropyrum pernix (strain K1) >gi|5105085|dbj|BAA80399.1|
(AP000061) 347aa long hypothetical oligopeptide
transport ATP-binding protein [Aeropyrum pernix]
Length = 347
Score = 436 bits (1109), Expect = e-121
Identities = 211/321 (65%), Positives = 256/321 (79%), Gaps = 8/321 (2%)
Query: 3 ETVLKVENLKKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTILR 62
E +++ LKKYFP++ LF T +VKAVD V+ I RG+T GLVGESG GKTT GR ILR
Sbjct: 28 ELLVETVGLKKYFPVKSLFFTRAYVKAVDNVTIGIPRGKTLGLVGESGSGKTTFGRVILR 87
Query: 63 LIEPTDGKIIFMGKDVTKLKGEELKWFRRKAQIMFQDPYSSLDPRQTVFQIIMEPVKFHG 122
L EPT G+I F G DV KL+G LK FRR+AQI+FQDPY SL+PR+T+F +I EP+K HG
Sbjct: 88 LEEPTGGRIFFDGIDVMKLRGRGLKEFRRRAQIIFQDPYGSLNPRKTIFNLIAEPIKVHG 147
Query: 123 IQVDDPEEFVIRLLESVGLNEMHLYRYPHEFSGGQRQRIALARLLALKPEFIVLDEPTSA 182
I+V D +E+++ LL VGLNE HLYRYPHEFSGGQRQRIA+AR+LALKPEFIVLDEPTSA
Sbjct: 148 IKVGDLQEYIVSLLYQVGLNETHLYRYPHEFSGGQRQRIAIARVLALKPEFIVLDEPTSA 207
Query: 183 LDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVGPADRIFE 242
LDVSVQA ILN LK+LQ K+ TYLFISHDLGVV+YMSD I VMYLGK+VE G A+ +FE
Sbjct: 208 LDVSVQAQILNLLKDLQRKYSLTYLFISHDLGVVRYMSDYIAVMYLGKIVEFGEAEEVFE 267
Query: 243 NPLHPYTQMLFSAIPIPDPDLAREMKKKRMKVTGEPPSPINPPKGCRFHPRCPYAKAGLC 302
PLHPYT++L +IP+PDP++A+ ++ R+++ GEPPSPINPP GCRF RCP A
Sbjct: 268 KPLHPYTKVLLESIPVPDPEVAK--RRSRIRIKGEPPSPINPPSGCRFRTRCPIA----V 321
Query: 303 DK--EEPPMVEVEKDHYVACW 321
DK EEPP+ EVE+ H+VACW
Sbjct: 322 DKCLEEPPLEEVERGHWVACW 342
>pir||C72371 oligopeptide ABC transporter, ATP-binding protein - Thermotoga
maritima (strain MSB8)
>gi|4981011|gb|AAD35585.1|AE001726_19 (AE001726)
oligopeptide ABC transporter, ATP-binding protein
[Thermotoga maritima]
Length = 384
Score = 353 bits (897), Expect = 1e-96
Identities = 193/382 (50%), Positives = 246/382 (63%), Gaps = 67/382 (17%)
Query: 1 MTETVLKVENLKKYFPIR-GLF-RTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGR 58
M+ +L+VENL K+FPIR G+F R +GWVKAVDGVSF I GETFGLVGESGCGKTT G
Sbjct: 1 MSREILRVENLVKHFPIRAGVFKRIVGWVKAVDGVSFSINEGETFGLVGESGCGKTTIGM 60
Query: 59 TILRLIEPTDGKII---------FMGK---------------------DVTKLKG----- 83
T+LRL EPT G+II FM + DV KL+G
Sbjct: 61 TLLRLYEPTSGRIIVDNEDTTYYFMPRSKAKKYIKQTYLSRFVNMKESDVEKLEGVDREY 120
Query: 84 ------------------------EELKWFRRKAQIMFQDPYSSLDPRQTVFQIIMEPVK 119
E+ K FRR+ QI+FQDPYSSL+PR V I+ E +
Sbjct: 121 ARIFFEEAKGSPKKFMSILLDDLPEKRKKFRREMQIVFQDPYSSLNPRLRVKSIVGEGIV 180
Query: 120 FHGI-QVDDPEEFVIRLLESVGLNEMHLYRYPHEFSGGQRQRIALARLLALKPEFIVLDE 178
H I + + E+ + +LE VG+ ++YR+PHEFSGGQRQRI +AR LAL+P+ +V DE
Sbjct: 181 THRIARGKEVEKRIKEILEDVGIPSAYVYRFPHEFSGGQRQRIGIARALALEPKLVVADE 240
Query: 179 PTSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVGPAD 238
+ALDVS+++ I+N +++LQ +H TY+FISHDL VVK++SDRIGVMYLGK+VE+ P
Sbjct: 241 AVAALDVSIRSQIINLMEDLQREHKLTYIFISHDLAVVKHISDRIGVMYLGKMVELAPKK 300
Query: 239 RIFENPLHPYTQMLFSAIPIPDPDLAREMKKKRMKVTGEPPSPINPPKGCRFHPRCPYAK 298
+FE PLHPYT L SAIP+PDP K++R+ + G+ PSPINPP GCRFH RCP AK
Sbjct: 301 DLFEKPLHPYTVALMSAIPVPDP----TKKRERIILKGDVPSPINPPSGCRFHTRCPIAK 356
Query: 299 AGLCDKEEPPMVEVEKDHYVAC 320
+C KEEP EVE+ H+VAC
Sbjct: 357 E-ICSKEEPAFREVEEGHFVAC 377
>pir||F71211 probable oligopeptide transport ATP-binding protein appF -
Pyrococcus horikoshii >gi|3258402|dbj|BAA31085.1|
(AP000007) 335aa long hypothetical oligopeptide
transport ATP-binding protein appF [Pyrococcus
horikoshii]
Length = 335
Score = 353 bits (897), Expect = 1e-96
Identities = 175/331 (52%), Positives = 237/331 (70%), Gaps = 13/331 (3%)
Query: 1 MTETVLKVENLKKYFPIRGLFRTI------GWVKAVDGVSFEIKRGETFGLVGESGCGKT 54
M+E +LKVENLKKYFP+R F + +VKAVDGVSFEI + + F LVGESGCGKT
Sbjct: 1 MSEPILKVENLKKYFPVRRGFLSALRGEPQKFVKAVDGVSFEIYKQQVFALVGESGCGKT 60
Query: 55 TTGRTILRLIEPTDGKIIFMGKDVTKLKG-EELKWFRRKAQIMFQDPYSSLDPRQTVFQI 113
TTG+ I++L+EPTDGKI G+DVT+L+ EE+K +RRK Q++FQDP+SS++PR ++ +
Sbjct: 61 TTGKLIVKLLEPTDGKIYLEGQDVTELRTKEEIKAYRRKVQMIFQDPFSSMNPRFRIYDV 120
Query: 114 IMEPVKFHGIQVD--DPEEFVIRLLESVGLN--EMHLYRYPHEFSGGQRQRIALARLLAL 169
+ EP+ HGI + EE + + LE V + E ++ R+PH SGGQRQR+A+AR L L
Sbjct: 121 LEEPLLIHGIGETRAEREELIYKALEMVKITPPEEYVGRFPHMLSGGQRQRVAIARALIL 180
Query: 170 KPEFIVLDEPTSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLG 229
P F+V DEP S LDVS++A IL +KEL+EK G TYL+I+HDL +Y +D I VMYLG
Sbjct: 181 NPTFVVADEPVSMLDVSIRAEILELMKELKEKMGVTYLYITHDLSTARYFADWIAVMYLG 240
Query: 230 KLVEVGPADRIFENPLHPYTQMLFSAIPIPDPDLAREMKKKRMKVTGEPPSPINPPKGCR 289
++VE+GPA I +NPLHPYT+ L +A+P P P+ R+ K + + GE PS +N P GCR
Sbjct: 241 RIVEMGPAKEIIDNPLHPYTRALLAAVPEPIPE--RKDVIKELPIKGEVPSAVNIPSGCR 298
Query: 290 FHPRCPYAKAGLCDKEEPPMVEVEKDHYVAC 320
FHPRC Y K GLCD ++P ++E +H+V C
Sbjct: 299 FHPRCIYFKKGLCDVKQPQLIEYSHNHWVEC 329
>sp|P42065|APPF_BACSU OLIGOPEPTIDE TRANSPORT ATP-BINDING PROTEIN APPF
>gi|2119774|pir||I40544 oligopeptide transport
ATP-binding protein appF - Bacillus subtilis
>gi|677944|gb|AAA62357.1| (U20909) AppF [Bacillus
subtilis] >gi|2633491|emb|CAB12994.1| (Z99110)
oligopeptide ABC transporter (ATP-binding protein)
[Bacillus subtilis]
Length = 329
Score = 351 bits (892), Expect = 5e-96
Identities = 175/326 (53%), Positives = 238/326 (72%), Gaps = 7/326 (2%)
Query: 3 ETVLKVENLKKYFPIR-GLF-RTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTI 60
ET+L++ ++KKYFPIR GLF R +G VKAVDGVSF +K+GET G+VGESGCGK+T GRT+
Sbjct: 7 ETILELRDVKKYFPIRSGLFQRKVGDVKAVDGVSFSLKKGETLGIVGESGCGKSTAGRTM 66
Query: 61 LRLIEPTDGKIIFMGKDVTKLKGEEL-KWFRRKAQIMFQDPYSSLDPRQTVFQIIMEPVK 119
+RL +PT+G+I+F G+D++ L E+L K R+ Q++FQDP++SL+PR+T+ II EP
Sbjct: 67 IRLYKPTEGQILFKGQDISNLSEEKLRKSVRKNIQMVFQDPFASLNPRKTLRSIIKEPFN 126
Query: 120 FHGIQ-VDDPEEFVIRLLESVGLNEMHLYRYPHEFSGGQRQRIALARLLALKPEFIVLDE 178
H + + + E V LL VGL+ RYPHEFSGGQRQRI +AR L L PE I+ DE
Sbjct: 127 THNMYTMRERNEKVEELLARVGLHPSFAGRYPHEFSGGQRQRIGIARALTLNPELIIADE 186
Query: 179 PTSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVGPAD 238
P SALDVS+Q ++N ++ELQE+ TYLFISHDL VV+++SDR+GVMYLGK++E+
Sbjct: 187 PVSALDVSIQPQVINLMEELQEEFNLTYLFISHDLSVVRHISDRVGVMYLGKMMELTGKH 246
Query: 239 RIFENPLHPYTQMLFSAIPIPDPDLAREMKKKRMKVTGEPPSPINPPKGCRFHPRCPYAK 298
+++NPLHPYTQ L S++P+ +K++R+ + GE PSP NPPKGC FH RCP AK
Sbjct: 247 ELYDNPLHPYTQALLSSVPVTRK--RGSVKRERIVLKGELPSPANPPKGCVFHTRCPVAK 304
Query: 299 AGLCDKEEPPMVEVEKDHYVACWLYA 324
+C ++ P E H+VAC LY+
Sbjct: 305 P-ICKEQIPEFKEAAPSHFVACHLYS 329
>pir||F75026 oligopeptide transport ATP-binding protein appf. PAB1197 -
Pyrococcus abyssi (strain Orsay)
>gi|5459166|emb|CAB50652.1| (AJ248288) OLIGOPEPTIDE
TRANSPORT ATP-BINDING PROTEIN APPF. [Pyrococcus abyssi]
Length = 335
Score = 351 bits (891), Expect = 7e-96
Identities = 172/331 (51%), Positives = 237/331 (70%), Gaps = 13/331 (3%)
Query: 1 MTETVLKVENLKKYFPIR-GLFRTIG-----WVKAVDGVSFEIKRGETFGLVGESGCGKT 54
M E +LKVENLKKYFPIR G ++ +V+AVDG+SFE+ + + F LVGESGCGKT
Sbjct: 1 MAEPILKVENLKKYFPIRRGFLASLRGEPQQFVRAVDGISFEVYKQQVFALVGESGCGKT 60
Query: 55 TTGRTILRLIEPTDGKIIFMGKDVTKLKG-EELKWFRRKAQIMFQDPYSSLDPRQTVFQI 113
TTG+ +++L+EPTDGKI G+DVT+L+ EE+K +RR+ Q++FQDP+SS++PR ++ +
Sbjct: 61 TTGKLVVKLLEPTDGKIYLEGQDVTQLRTKEEIKAYRRRVQMIFQDPFSSMNPRFRIYDV 120
Query: 114 IMEPVKFHGIQVD--DPEEFVIRLLESVGLN--EMHLYRYPHEFSGGQRQRIALARLLAL 169
+ EP+ HGI + EE + + LE V + E ++ R+PH SGGQRQR+A+AR L L
Sbjct: 121 LEEPLLIHGIGETRAEREELIYKALEMVKITPPEEYVGRFPHMLSGGQRQRVAIARALIL 180
Query: 170 KPEFIVLDEPTSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLG 229
P FIV DEP S LDVS++A IL +KEL+EK G TYL+I+HDL +Y +D I VMYLG
Sbjct: 181 NPTFIVADEPVSMLDVSIRAEILELMKELKEKMGVTYLYITHDLSTARYFADWIAVMYLG 240
Query: 230 KLVEVGPADRIFENPLHPYTQMLFSAIPIPDPDLAREMKKKRMKVTGEPPSPINPPKGCR 289
++VE+GPA + +NPLHPYT+ L +A+P P P+ R+ K + + GE PS +N P GCR
Sbjct: 241 RIVEMGPAKEVIDNPLHPYTRALLAAVPEPIPE--RKDVIKELPIKGEVPSAVNIPPGCR 298
Query: 290 FHPRCPYAKAGLCDKEEPPMVEVEKDHYVAC 320
FHPRC Y K GLCD +EP ++E +H+V C
Sbjct: 299 FHPRCVYFKKGLCDTKEPKLIEYSHNHWVEC 329
>pir||B72424 oligopeptide ABC transporter, ATP-binding protein - Thermotoga
maritima (strain MSB8)
>gi|4980543|gb|AAD35151.1|AE001692_8 (AE001692)
oligopeptide ABC transporter, ATP-binding protein
[Thermotoga maritima]
Length = 338
Score = 350 bits (889), Expect = 1e-95
Identities = 178/326 (54%), Positives = 240/326 (73%), Gaps = 15/326 (4%)
Query: 5 VLKVENLKKYFPI-RGLFR-TIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTILR 62
+L+V+ LKKYFP+ +G F+ +G+V+AVD VSF+IK+GET LVGESGCGKTTT ++ILR
Sbjct: 3 LLEVKGLKKYFPLTKGFFKKVVGYVRAVDDVSFDIKQGETLALVGESGCGKTTTAKSILR 62
Query: 63 LIEPTDGKIIFM--GKDVT--KLKGEELKWFRRKAQIMFQDPYSSLDPRQTVFQIIMEPV 118
I+PTDG +I GKDV KL +ELK +RR Q++FQ+PY+SL+PR V +I+ EP+
Sbjct: 63 AIDPTDGDVILHLDGKDVNIAKLSRDELKPYRRYMQMIFQNPYTSLNPRMKVKEIVGEPL 122
Query: 119 KFHGI-QVDDPEEFVIRLLESVGLNEMHLYRYPHEFSGGQRQRIALARLLALKPEFIVLD 177
+GI + + E+ V LL++VGL ++ RYPH FSGGQRQRI +AR +AL+P+ +V D
Sbjct: 123 LVNGIAKGKELEDRVAELLKAVGLRPEYMIRYPHAFSGGQRQRIVIARAIALRPKLVVCD 182
Query: 178 EPTSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVGPA 237
EPTSALDVS++A ILN L +LQE+ TYLFI+HDL VV+++SDR+ VMYLGK+VE+
Sbjct: 183 EPTSALDVSIRAQILNLLMDLQEEFALTYLFITHDLSVVEHISDRVAVMYLGKIVELSST 242
Query: 238 DRIFENPLHPYTQMLFSAIPIPDPDLAREMKKKRMKVTGEPPSPINPPKGCRFHPRCPYA 297
+ IFENP HPYT+ L ++P PDPDL E+ + + GE P+P NPP GC FHPRCPYA
Sbjct: 243 EEIFENPKHPYTETLLRSVPKPDPDLREEL----VPIEGEVPNPANPPSGCYFHPRCPYA 298
Query: 298 KAGLCDKEEPPMVEV---EKDHYVAC 320
K+ +C +E P + + HYVAC
Sbjct: 299 KS-ICKEEYPEFRNLGTEDNPHYVAC 323
>pir||G75202 dipeptide abc transporter, dipeptide-binding protein PAB0095 -
Pyrococcus abyssi (strain Orsay)
>gi|5457579|emb|CAB49070.1| (AJ248283) dipeptide ABC
transporter, dipeptide-binding protein [Pyrococcus
abyssi]
Length = 345
Score = 349 bits (885), Expect = 3e-95
Identities = 173/317 (54%), Positives = 227/317 (71%), Gaps = 9/317 (2%)
Query: 9 ENLKKYFPIRG-LFRTIG-WVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTILRLIEP 66
ENLKKYFP+RG LF+ +V AVDG+S I++GETFGL GESGCGK+T GR +LRLIEP
Sbjct: 10 ENLKKYFPVRGGLFKQKNLYVHAVDGISINIRKGETFGLAGESGCGKSTFGRLLLRLIEP 69
Query: 67 TDGKIIFMGKDVTKLKGEELKWFRRKAQIMFQDPYSSLDPRQTVFQIIMEPVKFHGIQVD 126
T+G I F G D+TKL +E++ RR+ I+FQDP SSL+PR T++ + P++ H +
Sbjct: 70 TEGSIYFDGIDITKLDKDEMRKLRRRMGIVFQDPKSSLNPRMTIYDTLKRPLEIHRLAES 129
Query: 127 DPEEF--VIRLLESVGLNEMHLYRYPHEFSGGQRQRIALARLLALKPEFIVLDEPTSALD 184
+ E++ ++ +LE+VGL E HL RYPHE SGGQ QR+++AR + P+F+VLDEPTSALD
Sbjct: 130 EEEKYDKIVEILEAVGLGEEHLSRYPHELSGGQLQRVSIARAIITNPDFVVLDEPTSALD 189
Query: 185 VSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVGPADRIFENP 244
+SVQA ILN L LQ K TYLFISHD+ V++YMSDRIG+MYLGK+VE+ D +
Sbjct: 190 ISVQAQILNLLVNLQRKFNLTYLFISHDISVLQYMSDRIGIMYLGKVVEILSIDDFRKGE 249
Query: 245 L-HPYTQMLFSAIPIPDPDLAREMKKKRMKVTGEPPSPINPPKGCRFHPRCPYAKAGLCD 303
+ HPYT L + P P + +++ +TGE PSPIN P GCRFH RCP+ C
Sbjct: 250 IYHPYTAYLLLSTPALHPS---KRTSRKVILTGEVPSPINVPPGCRFHVRCPFV-TQKCK 305
Query: 304 KEEPPMVEVEKDHYVAC 320
EEPP+VE++KDHYVAC
Sbjct: 306 DEEPPLVEIKKDHYVAC 322
>dbj|BAB07364.1| (AP001519) oligopeptide ABC transporter (ATP-binding protein)
[Bacillus halodurans]
Length = 322
Score = 347 bits (882), Expect = 8e-95
Identities = 172/326 (52%), Positives = 232/326 (70%), Gaps = 8/326 (2%)
Query: 1 MTETVLKVENLKKYFPIRGLF--RTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGR 58
M + +L+V+NL K F I G F R +G V+AVD +SF + GE G+VGESGCGK+TTG+
Sbjct: 1 MGKPLLEVKNLTKSFDINGGFFSRKVGEVRAVDNLSFSVYEGEVLGIVGESGCGKSTTGK 60
Query: 59 TILRLIEPTDGKIIFMGKDVTKLKGEELKWFRRKAQIMFQDPYSSLDPRQTVFQIIMEPV 118
ILRLIEP+ G++ F G ++T L +++ RR QI+FQDPY+SL+PR T+ +II EP+
Sbjct: 61 AILRLIEPSSGEVYFAGTEITALSEGDMRKRRRDMQIIFQDPYASLNPRHTIEKIIREPL 120
Query: 119 KFHGIQVDDPE-EFVIRLLESVGLNEMHLYRYPHEFSGGQRQRIALARLLALKPEFIVLD 177
H I + E V LLE+VGL+ H RYPH+FSGGQRQRI +AR LA+ P+ ++ D
Sbjct: 121 IVHQIGTKKEQLERVEELLETVGLSSDHATRYPHQFSGGQRQRIGIARALAVHPKLVICD 180
Query: 178 EPTSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVGPA 237
EP SALDVSVQ+ ILN + +L+E TY+FI+HDL VVK++SDR+ VMYLG++VE+
Sbjct: 181 EPVSALDVSVQSQILNLMADLKETFALTYIFIAHDLSVVKHISDRVAVMYLGRMVEMATK 240
Query: 238 DRIFENPLHPYTQMLFSAIPIPDPDLAREMKKKRMKVTGEPPSPINPPKGCRFHPRCPYA 297
D++FENP HPYT+ L SA+P+PDPD A+E ++ + G+ PSP NPP+GC FH RCP
Sbjct: 241 DQLFENPKHPYTRALLSAVPVPDPDAAKE----KILLKGDVPSPSNPPEGCAFHTRCPDC 296
Query: 298 KAGLCDKEEPPMVEVEKDHYVACWLY 323
+C + P + E EK HYVAC LY
Sbjct: 297 -MDVCKIKRPSLHEKEKGHYVACHLY 321
>pir||T34760 oligopeptide ABC transporter ATP-binding protein - Streptomyces
coelicolor >gi|3402247|emb|CAA20183.1| (AL031184)
oligopeptide ABC transporter ATP-binding protein
[Streptomyces coelicolor A3(2)]
Length = 496
Score = 347 bits (882), Expect = 8e-95
Identities = 173/321 (53%), Positives = 227/321 (69%), Gaps = 5/321 (1%)
Query: 3 ETVLKVENLKKYFPIRG--LFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTI 60
ET+LKV L+K+FPIR L R +G V+AVDG+ FE++ GET G+VGESGCGK+T GR I
Sbjct: 37 ETLLKVTGLQKHFPIRKGLLQRQVGAVRAVDGIDFEVRSGETLGVVGESGCGKSTMGRLI 96
Query: 61 LRLIEPTDGKIIFMGKDVTKLKGEELKWFRRKAQIMFQDPYSSLDPRQTVFQIIMEPVKF 120
RL+EPT GK+ F GKD+T L ++ RR Q++FQDPYSSL+PR T+ I+ P K
Sbjct: 97 TRLLEPTAGKVEFQGKDITHLGVGGMRPLRRDVQMIFQDPYSSLNPRHTIGTIVSAPFKL 156
Query: 121 HGIQVDDP-EEFVIRLLESVGLNEMHLYRYPHEFSGGQRQRIALARLLALKPEFIVLDEP 179
G+Q + ++ V RLL VGLN H RYPHEFSGGQRQRI +AR LAL P +V DEP
Sbjct: 157 QGVQPEGGVKKEVQRLLSVVGLNPEHYNRYPHEFSGGQRQRIGIARALALNPRLVVADEP 216
Query: 180 TSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVGPADR 239
SALDVS+QA ++N L +LQ++ G TY+ I+HDL VV+++SDRI VMYLGK++E+ D
Sbjct: 217 VSALDVSIQAQVVNLLDDLQQELGLTYVIIAHDLSVVRHVSDRIAVMYLGKIMELADRDL 276
Query: 240 IFENPLHPYTQMLFSAIPIPDPDLAREMKKKRMKVTGEPPSPINPPKGCRFHPRCPYAKA 299
+++ P+HPYT+ L SA+PIPDP R K +R+ + G+ PSPI PP GCRFH RC +
Sbjct: 277 LYKTPMHPYTKALMSAVPIPDP-ARRGAKSERILLKGDVPSPIAPPSGCRFHTRC-WKAT 334
Query: 300 GLCDKEEPPMVEVEKDHYVAC 320
+C EPP+ E+ VAC
Sbjct: 335 QVCTTTEPPLKELRPGQQVAC 355
>pir||B72300 oligopeptide ABC transporter, ATP-binding protein - Thermotoga
maritima (strain MSB8)
>gi|4981604|gb|AAD36138.1|AE001766_4 (AE001766)
oligopeptide ABC transporter, ATP-binding protein
[Thermotoga maritima]
Length = 341
Score = 347 bits (880), Expect = 1e-94
Identities = 180/330 (54%), Positives = 240/330 (72%), Gaps = 19/330 (5%)
Query: 5 VLKVENLKKYFPI--RGLFR-TIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTIL 61
+L+V+NLKKYFPI RG R +G++KAVDG+SF I+ GET GLVGESGCGKTTT + I+
Sbjct: 3 LLEVKNLKKYFPIIKRGFRRKVVGYLKAVDGISFHIEEGETLGLVGESGCGKTTTAKLIM 62
Query: 62 RLIEPTDGKIIFMGK----DVTKLKGEEL--KWFRRKAQIMFQDPYSSLDPRQTVFQIIM 115
R IEPT+G+I+ D+TKL +EL K RR Q++FQDPYSSL+PR TV II
Sbjct: 63 RGIEPTEGEIVLNMDGEKVDITKLSEKELREKGVRRFLQMIFQDPYSSLNPRMTVRDIIA 122
Query: 116 EPVKFHGI--QVDDPEEFVIRLLESVGLNEMHLYRYPHEFSGGQRQRIALARLLALKPEF 173
EP+ +G+ ++ + V LL +VGL ++ RYPH FSGGQRQRIA+AR +ALKP+
Sbjct: 123 EPLVVNGVIKGKEEIDAIVSDLLRAVGLRPEYMQRYPHAFSGGQRQRIAIARAIALKPKL 182
Query: 174 IVLDEPTSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVE 233
++ DEPTSALDVSVQA I+N LK+LQ+++ TYLFISHDLGVV+++++R+ VMY+G++VE
Sbjct: 183 VLCDEPTSALDVSVQAQIINLLKDLQKEYNLTYLFISHDLGVVEHITNRVAVMYVGRIVE 242
Query: 234 VGPADRIFENPLHPYTQMLFSAIPIPDPDLAREMKKKRMKVTGEPPSPINPPKGCRFHPR 293
+ + +F +P HPYT+ L SA+P PDP + K+K+ ++TGE P P NPP GC FHPR
Sbjct: 243 LAETEELFSSPKHPYTEALLSAVPKPDP----KRKRKKAQLTGEVPDPSNPPSGCYFHPR 298
Query: 294 CPYAKAGLCDKEEPPMVEVEKD---HYVAC 320
CPYAKA +C + P + V D H VAC
Sbjct: 299 CPYAKA-ICKEVYPDLRNVGTDQNPHLVAC 327
>dbj|BAB03746.1| (AP001507) oligopeptide ABC transporter (ATP-binding protein)
[Bacillus halodurans]
Length = 338
Score = 341 bits (865), Expect = 8e-93
Identities = 176/326 (53%), Positives = 229/326 (69%), Gaps = 11/326 (3%)
Query: 1 MTETVLKVENLKKYFPIRG--LFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGR 58
M + +LKVE LK+YFPI+G L RT+ VKAVD VSF I GET +VGESGCGK+TTGR
Sbjct: 1 MQKELLKVEGLKQYFPIKGGILGRTVNHVKAVDDVSFTIYEGETVSIVGESGCGKSTTGR 60
Query: 59 TILRLIEPTDGKIIFMGKDVTKLKGEELKWFRRKAQIMFQDPYSSLDPRQTVFQIIMEPV 118
ILRL EPTDGKI F G+D+ L E++ R+ QI+FQDPY+S++PRQT+ Q++ E +
Sbjct: 61 AILRLDEPTDGKIEFQGEDLLSLNKREMRKKRKDLQIIFQDPYASINPRQTIRQVLEEAM 120
Query: 119 KFHGIQVDDPE-EFVIRLLESVGLNEMHLYRYPHEFSGGQRQRIALARLLALKPEFIVLD 177
+ + D E + L+++VGL R+PHEFSGGQRQRI +AR L++ P+ IV D
Sbjct: 121 EIQKVVPRDKRGERIRELMDTVGLGSHQADRFPHEFSGGQRQRIGIARALSVNPKLIVCD 180
Query: 178 EPTSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVGPA 237
E SALDVS+QA ++N LK LQ + TYLFISHDLGVV+++SDR+ VMYLG++VE+
Sbjct: 181 EAVSALDVSIQAQVINLLKRLQREFKLTYLFISHDLGVVRHISDRVIVMYLGRIVEIADK 240
Query: 238 DRIFENPLHPYTQMLFSAIPIPDPDLAREMKKKRMKVTGEPPSPINPPKGCRFHPRCPYA 297
+FENP HPYT+ L SAIP+PDP E KK+R+ + G+ PSPI+PP GCRFH RCP+A
Sbjct: 241 TSLFENPQHPYTKALLSAIPVPDP----EKKKERIILKGDVPSPIDPPNGCRFHTRCPFA 296
Query: 298 KAGLCDKEEPPM--VEVEKD-HYVAC 320
C E P + + KD H AC
Sbjct: 297 -TDKCRTETPELRTADYMKDGHLAAC 321
>pir||G75380 peptide ABC transporter, ATP-binding protein - Deinococcus
radiodurans (strain R1)
>gi|6459330|gb|AAF11129.1|AE002000_5 (AE002000) peptide
ABC transporter, ATP-binding protein [Deinococcus
radiodurans]
Length = 346
Score = 333 bits (846), Expect = 1e-90
Identities = 165/319 (51%), Positives = 226/319 (70%), Gaps = 8/319 (2%)
Query: 5 VLKVENLKKYFPIRG--LFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTILR 62
+L+V NL+KYFPIRG + R + VKAV+ ++F + +GE GL+GESG GKTT GR +LR
Sbjct: 27 LLEVNNLQKYFPIRGGLMSRVVANVKAVNDITFRVGKGEVVGLIGESGSGKTTAGRALLR 86
Query: 63 LIEPTDGKIIFMGKDVTKLKGEELKWFRRKAQIMFQDPYSSLDPRQTVFQIIMEPVKFHG 122
LIEPT G++IF G D+TKL +++ +RR+ QI+FQDP++SL+PR TV I+ E ++ H
Sbjct: 87 LIEPTGGQVIFNGTDITKLGKSQMRDYRREMQIIFQDPFASLNPRMTVSDILGEAMQIHN 146
Query: 123 IQVDDPE-EFVIRLLESVGLNEMHLYRYPHEFSGGQRQRIALARLLALKPEFIVLDEPTS 181
+ + + LL+ VGL H+ RYPHEFSGGQRQRI +AR LA+ P FIV DEP S
Sbjct: 147 LHPGKARVDRIAELLQRVGLRPEHMGRYPHEFSGGQRQRIGIARALAVDPSFIVADEPVS 206
Query: 182 ALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVGPADRIF 241
ALDVS+QA ++N +++LQE+ G T LFI+HDL VV+Y+ DR+ VMYLG+++E+ P+ +
Sbjct: 207 ALDVSIQAQVVNLIQDLQEELGLTVLFIAHDLHVVEYICDRMIVMYLGRIMEIAPSRELN 266
Query: 242 ENPLHPYTQMLFSAIPIPDPDLAREMKKKRMKVTGEPPSPINPPKGCRFHPRCPYAKAGL 301
NP HPYT+ L SA P+PDP + K++R+ + G+ PSPINPP GC F RC YA A
Sbjct: 267 RNPKHPYTEALLSASPVPDPTI----KRQRIILEGDIPSPINPPSGCVFRTRCRYAIAD- 321
Query: 302 CDKEEPPMVEVEKDHYVAC 320
C P + EV DH+ AC
Sbjct: 322 CANIVPELREVSPDHFKAC 340
>dbj|BAB04070.1| (AP001508) oligopeptide ABC transporter (ATP-binding protein)
[Bacillus halodurans]
Length = 332
Score = 329 bits (834), Expect = 3e-89
Identities = 166/323 (51%), Positives = 226/323 (69%), Gaps = 6/323 (1%)
Query: 1 MTETVLKVENLKKYFPI-RGLF-RTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGR 58
M E +L+ + L K+F + G F R ++AVDGV I GET G+VGESGCGK+T G+
Sbjct: 1 MKEVLLEAKGLTKHFDVSEGFFKRKKAVLRAVDGVDLTIYAGETLGIVGESGCGKSTLGQ 60
Query: 59 TILRLIEPTDGKIIFMGKDVTKLKGEELKWFRRKAQIMFQDPYSSLDPRQTVFQIIMEPV 118
++RL+EPT G + F G D LKGE L+ R QI+FQDP+SSL+PR TV +II EP+
Sbjct: 61 LLMRLLEPTRGTLSFAGSDFLALKGEALRQKRSDIQIIFQDPFSSLNPRMTVREIIGEPL 120
Query: 119 KFHGI-QVDDPEEFVIRLLESVGLNEMHLYRYPHEFSGGQRQRIALARLLALKPEFIVLD 177
K H + + +D + V L+++VGL+ + RYPHEFSGGQRQRI +AR +ALKP+ I+ D
Sbjct: 121 KTHRLAKGNDLIKRVDELMDAVGLDRSYAKRYPHEFSGGQRQRIGIARAIALKPKLIICD 180
Query: 178 EPTSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVGPA 237
EP SALDVS+QA ILN + LQ++ T+LFI+H L VK++SDR+ VMYLGK+VE+
Sbjct: 181 EPVSALDVSIQAQILNLMVRLQKEFQLTFLFIAHGLPAVKHISDRMAVMYLGKVVELASK 240
Query: 238 DRIFENPLHPYTQMLFSAIPIPDPDLAREMKKKRMKVTGEPPSPINPPKGCRFHPRCPYA 297
D +F P+HPY++ L A+PIPDP + + KK + + G+ PSP++PP GCRFHPRCPYA
Sbjct: 241 DALFAQPMHPYSEGLIQAVPIPDPTVRND--KKWVTLEGDLPSPVHPPSGCRFHPRCPYA 298
Query: 298 KAGLCDKEEPPMVEVEKDHYVAC 320
+ C +EP + E E H+VAC
Sbjct: 299 Q-DKCTVQEPALTEKEPGHFVAC 320
>pir||F71130 probable oligopeptide transport ATP-binding protein appF -
Pyrococcus horikoshii >gi|3257221|dbj|BAA29904.1|
(AP000003) 323aa long hypothetical oligopeptide
transport ATP-binding protein APPF [Pyrococcus
horikoshii]
Length = 323
Score = 327 bits (830), Expect = 1e-88
Identities = 170/329 (51%), Positives = 234/329 (70%), Gaps = 15/329 (4%)
Query: 2 TETVLKVENLKKYFPIRG--LFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRT 59
++T+++V+NL K FP+ L + I ++AVD VSFEIK+ E GLVGESGCGK+T G+
Sbjct: 3 SDTLIEVKNLTKLFPVTSSILGKKIS-IRAVDNVSFEIKKNEILGLVGESGCGKSTLGKL 61
Query: 60 ILRLIEPTDGKIIFMGKDVTKLKGEELKWFRRKAQIMFQDPYSSLDPRQTVFQIIMEPVK 119
++RL+EPT G ++F G+D+ KL+G++LK +R+ Q++FQ+PY+S DPR T+F+ I EP+
Sbjct: 62 LVRLLEPTSGTVLFKGQDIYKLRGKKLKEYRKSVQMVFQNPYTSFDPRLTLFENIAEPLY 121
Query: 120 FHGIQVDDPEEFVIRL--LESVGLN--EMHLYRYPHEFSGGQRQRIALARLLALKPEFIV 175
H + ++ E + + E VGL E L RYPHE SGGQ QR ++AR +AL+PEFIV
Sbjct: 122 THKLALNKEEALTLAMQYFEDVGLTPPEDFLMRYPHELSGGQLQRASIARAIALEPEFIV 181
Query: 176 LDEPTSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVG 235
DEPTS LD S+++ ILN +K+L+++ ++LFI+HDL Y++DRI VMYLGK+VE+G
Sbjct: 182 ADEPTSMLDASLRSGILNLIKKLRKELHTSWLFITHDLPSAYYIADRIAVMYLGKIVEIG 241
Query: 236 PADRIFENPLHPYTQMLFSA-IPIPDPDLAREMKKKRMKVTGEPPSPINPPKGCRFHPRC 294
+ + +NPLHPYTQ L A +PI DPD + K KV GE P P+ CRF PRC
Sbjct: 242 ESKEVLKNPLHPYTQALLEANLPI-DPDAS----LKEPKVKGE-PKPVFETGYCRFFPRC 295
Query: 295 PYAKAGLCDKEEPPMVEVEKDHYVACWLY 323
PYA C KEEPP+VEV+KDHYVACWLY
Sbjct: 296 PYA-FEKCKKEEPPLVEVKKDHYVACWLY 323
>pir||H72366 oligopeptide ABC transporter, ATP-binding protein - Thermotoga
maritima (strain MSB8)
>gi|4981043|gb|AAD35615.1|AE001728_16 (AE001728)
oligopeptide ABC transporter, ATP-binding protein
[Thermotoga maritima]
Length = 389
Score = 327 bits (829), Expect = 1e-88
Identities = 180/388 (46%), Positives = 242/388 (61%), Gaps = 72/388 (18%)
Query: 6 LKVENLKKYFPIRGLF---RTIGWVKAVDGVSFEIKRGETFGLVGESGCGKT-------- 54
++V +L+KYFPIR F + +G+VKAVD +SF +++G+TF LVGESGCGKT
Sbjct: 4 IEVLSLRKYFPIRKGFLVKKIVGYVKAVDDISFSVEKGKTFALVGESGCGKTTTAKTILR 63
Query: 55 ----TTGRTIL----------------RLIEPT-------------DGKIIFMGKDVTK- 80
T GR ++ +E T +I+ + +DV K
Sbjct: 64 LTNPTAGRVVIDGDDTTYYFMKRRDAENYLETTYVDIFREMREKLSPDQIVDVLEDVDKK 123
Query: 81 --------LKGEELKW--------------FRRKAQIMFQDPYSSLDPRQTVFQIIMEPV 118
K E K+ FRRK QI+FQDP SSL+PR TV I+ EP+
Sbjct: 124 YAEIFFKEAKESEEKFYQILLDDIDEKRMKFRRKIQIVFQDPMSSLNPRMTVGDILTEPI 183
Query: 119 KFHGIQVDDPE--EFVIRLLESVGLNEMHLYRYPHEFSGGQRQRIALARLLALKPEFIVL 176
FHG+ E + LL+SVGL E HL RYPH+FSGGQRQRIA+AR +++ PE ++L
Sbjct: 184 LFHGLAKTREEAVDMAKDLLKSVGLKEYHLERYPHQFSGGQRQRIAIARAISINPEIVIL 243
Query: 177 DEPTSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVGP 236
DEPT++LDVSVQA ++N +LQE+ GFTYLFISHDLG+V+++S +G+MYLG++VE+G
Sbjct: 244 DEPTASLDVSVQAQVINLFLKLQEEKGFTYLFISHDLGLVRFISHEVGIMYLGRIVEMGN 303
Query: 237 ADRIFENPLHPYTQMLFSAIPIPDPDLAREMKKKRMKVTGEPPSPINPPKGCRFHPRCPY 296
D IF+NPLHPYTQ L SA+P+PDP + E +KR+ + G PSPIN P GC FHPRCPY
Sbjct: 304 TDEIFDNPLHPYTQALLSAVPVPDPKV--ERTRKRIILRGGVPSPINRPTGCFFHPRCPY 361
Query: 297 AKAGLCDKEEPPMVEVEKDHYVACWLYA 324
K +C+KE P M E+ H+VAC L++
Sbjct: 362 -KMPVCEKEYPVMKEISPGHWVACHLHS 388
>pir||A72216 oligopeptide ABC transporter, ATP-binding protein - Thermotoga
maritima (strain MSB8)
>gi|4982328|gb|AAD36815.1|AE001813_7 (AE001813)
oligopeptide ABC transporter, ATP-binding protein
[Thermotoga maritima]
Length = 328
Score = 324 bits (822), Expect = 8e-88
Identities = 166/319 (52%), Positives = 225/319 (70%), Gaps = 10/319 (3%)
Query: 5 VLKVENLKKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTILRLI 64
+L+ +LKKYFP +KAVDG+S EIK GET GLVGESGCGK+T GRTIL+L+
Sbjct: 13 LLQTVDLKKYFPQGKRI-----LKAVDGISIEIKEGETLGLVGESGCGKSTLGRTILKLL 67
Query: 65 EPTDGKIIFMGKDVTKLKGEELKWFRRKAQIMFQDPYSSLDPRQTVFQIIMEPVKFHGIQ 124
P GKI F GKD+T L +E+K +R+K QI+FQDP SL+P+ TV +II +P+ H I
Sbjct: 68 RPDGGKIFFEGKDITNLNDKEMKPYRKKMQIIFQDPLGSLNPQMTVGRIIEDPLIIHKIG 127
Query: 125 VD-DPEEFVIRLLESVGLNEMHLYRYPHEFSGGQRQRIALARLLALKPEFIVLDEPTSAL 183
+ + V LL+ VG+ + +PHEFSGGQ+QRI +AR LAL P+FIV DEP SAL
Sbjct: 128 TKKERRKRVEELLDMVGIGREFINSFPHEFSGGQQQRIGIARALALNPKFIVCDEPVSAL 187
Query: 184 DVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVGPADRIFEN 243
DVS+QA I++ L+E+Q+K G +YLFI+H+L VV+++S ++ VMYLGK+VE G D+IF N
Sbjct: 188 DVSIQAQIIDLLEEIQQKMGISYLFIAHNLAVVEHISHKVAVMYLGKIVEYGDVDKIFLN 247
Query: 244 PLHPYTQMLFSAIPIPDPDLAREMKKKRMKVTGEPPSPINPPKGCRFHPRCPYAKAGLCD 303
P+HPYT+ L ++P D K++ + GE PSPI+ PKGCRF RC KA +C
Sbjct: 248 PIHPYTRALLKSVPKIPWD---GQKQRFYSLKGELPSPIDLPKGCRFQTRCTEKKA-ICF 303
Query: 304 KEEPPMVEVEKDHYVACWL 322
++EP + EVEK+H+V+C L
Sbjct: 304 EKEPELTEVEKNHFVSCHL 322
>pir||B69856 oligopeptide transport ATP-binding protein homolog ykfD - Bacillus
subtilis >gi|2632021|emb|CAA05580.1| (AJ002571) YkfD
[Bacillus subtilis] >gi|2633654|emb|CAB13157.1| (Z99110)
similar to oligopeptide ABC transporter (permease)
[Bacillus subtilis]
Length = 327
Score = 320 bits (811), Expect = 2e-86
Identities = 161/293 (54%), Positives = 214/293 (72%), Gaps = 8/293 (2%)
Query: 5 VLKVENLKKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTILRLI 64
+L+V LK +F G RT VKAVDGV+F+I+ GETFGLVGESGCGK+T GR ++RL
Sbjct: 6 LLEVSQLKMHFDA-GKKRT---VKAVDGVTFQIREGETFGLVGESGCGKSTLGRVLMRLY 61
Query: 65 EPTDGKIIFMGKDVTKLKGEELKWFRRKAQIMFQDPYSSLDPRQTVFQIIMEPVKFHGIQ 124
+PT+G + + G ++ L +E F RK Q++FQDPY+SL+PR TV +II+EP++ H +
Sbjct: 62 QPTEGSVTYRGTNLHALSEKEQFAFNRKLQMIFQDPYASLNPRMTVREIILEPMEIHNLY 121
Query: 125 VDDPEEFVI--RLLESVGLNEMHLYRYPHEFSGGQRQRIALARLLALKPEFIVLDEPTSA 182
+ LLE+VGL+ RYPHEFSGGQRQRI +AR L+L PEFIV DEP SA
Sbjct: 122 NTHKARLSVVDELLEAVGLHPDFGSRYPHEFSGGQRQRIGIARALSLNPEFIVADEPISA 181
Query: 183 LDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVGPADRIFE 242
LDVSVQA ++N LK LQ++ G T+LFI+HDL +VK++SDRIGVMYLG ++E+ + ++
Sbjct: 182 LDVSVQAQVVNLLKRLQKEKGLTFLFIAHDLSMVKHISDRIGVMYLGHMMEITESGTLYR 241
Query: 243 NPLHPYTQMLFSAIPIPDPDLAREMKKKRMKVTGEPPSPINPPKGCRFHPRCP 295
PLHPYT+ L S+IPIPDP+L E K++R+ + GE PSP+NPP GC F RCP
Sbjct: 242 EPLHPYTKALLSSIPIPDPEL--EDKRERILLKGELPSPVNPPSGCVFRTRCP 292
>pir||C72289 oligopeptide ABC transporter, ATP-binding protein - Thermotoga
maritima (strain MSB8)
>gi|4981699|gb|AAD36227.1|AE001772_6 (AE001772)
oligopeptide ABC transporter, ATP-binding protein
[Thermotoga maritima]
Length = 325
Score = 320 bits (811), Expect = 2e-86
Identities = 169/328 (51%), Positives = 224/328 (67%), Gaps = 15/328 (4%)
Query: 5 VLKVENLKKYFPIRG------LFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGR 58
+++V+NLKKYFP++ L + +VKAVDGV+F+I G++ GLVGESG GKTTTGR
Sbjct: 3 LIEVQNLKKYFPVKQGPIDVLLRKPRKFVKAVDGVNFQIDEGKSLGLVGESGSGKTTTGR 62
Query: 59 TILRLIEPTDGKIIFMGKDVTKLKGEELKWFRRKAQIMFQDPYSSLDPRQTVFQIIMEPV 118
ILRL EPTDGKIIF G+D+TKL EE++ R++ QI+FQDP +SL+P V + I +
Sbjct: 63 VILRLEEPTDGKIIFDGRDITKLSKEEMRKLRKEMQIIFQDPMASLNPYMRVGKAIEHAL 122
Query: 119 KFHGI-QVDDPEEFVIRLLESVGLNEMH-LYR-YPHEFSGGQRQRIALARLLALKPEFIV 175
+ HGI +E V+ +L V L +YR YP E SGGQRQR+ +AR L LKP +V
Sbjct: 123 EIHGIGDRSSRKEMVLEMLRRVNLEPAEDIYRRYPRELSGGQRQRVVIARALILKPRLVV 182
Query: 176 LDEPTSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVG 235
DE + LDVSV++ +L L+EL+++ T LFI+HDL KY+ D I VMYLGK+VE+G
Sbjct: 183 ADEAVAMLDVSVRSQLLRLLQELRKEFNLTMLFITHDLATTKYVCDEIAVMYLGKIVEIG 242
Query: 236 PADRIFENPLHPYTQMLFSAIPIPDPDLAREMKKKRMKVTGEPPSPINPPKGCRFHPRCP 295
+ I+ NP HPYTQ L SA +P+P L KKK+ GE P+PI+ P GCRFHPRCP
Sbjct: 243 DFEDIYLNPKHPYTQALISA--VPEPSL---KKKKKFIPEGETPNPIDVPSGCRFHPRCP 297
Query: 296 YAKAGLCDKEEPPMVEVEKDHYVACWLY 323
Y + +C KEEP + VE++H VAC LY
Sbjct: 298 Y-RMDICMKEEPQLKAVEENHKVACHLY 324
>sp|Q53194|Y4TS_RHISN PROBABLE PEPTIDE ABC TRANSPORTER ATP-BINDING PROTEIN Y4TS
>gi|1486423|emb|CAA92401.1| (Z68203) OppF homologue
[Rhizobium sp.] >gi|2182649|gb|AAB91872.1| (AE000098)
Y4tS [Rhizobium sp. NGR234]
Length = 353
Score = 319 bits (809), Expect = 3e-86
Identities = 164/329 (49%), Positives = 222/329 (66%), Gaps = 8/329 (2%)
Query: 1 MTETVLKVENLKKYFPIR-GLFRT-IGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGR 58
M++ +LKVE+L K++PI G F+T + V+AV+ VSF ++ GET +VGESGCGK+T R
Sbjct: 1 MSDALLKVESLTKHYPIEAGWFKTNVPVVRAVEDVSFTVQAGETLCVVGESGCGKSTLAR 60
Query: 59 TILRLIEPTDGKIIFMGKDVTKLKGEELKWFRRKAQIMFQDPYSSLDPRQTVFQIIMEPV 118
++RLI+PT G+++ G D+ L+ EL+ +RR+ Q++FQDPYSSL+PR T QII EPV
Sbjct: 61 LLMRLIDPTSGRVLVEGTDIAGLRKNELRAWRRRMQMVFQDPYSSLNPRLTAGQIITEPV 120
Query: 119 K-FHGIQVDDPEEFVIRLLESVGLNEMHLYRYPHEFSGGQRQRIALARLLALKPEFIVLD 177
+ F + +E LL VG++ RYP E SGGQRQR+ +AR LALKP I+ D
Sbjct: 121 ENFECLSRRQRQELATDLLRKVGMSPEMASRYPSEMSGGQRQRLGIARALALKPSLIIAD 180
Query: 178 EPTSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVGPA 237
E SALDVSVQA ILN L +LQ++ G +FISHDL VV+++ R+ VMYLG++VE+ P
Sbjct: 181 EAVSALDVSVQAQILNLLMDLQQETGIALIFISHDLAVVEHIGHRVAVMYLGRIVELSPR 240
Query: 238 DRIFENPLHPYTQMLFSAIPIPDPDLAREMKKKRMKVTGEPPSPINPPKGCRFHPRCPYA 297
D +F P+HPYT+ L +A P+PDP AR + + GE PSP+NPP GC FHPRCP A
Sbjct: 241 DALFAKPVHPYTEALIAAAPVPDPARAR----LEVPLEGEVPSPVNPPSGCAFHPRCPLA 296
Query: 298 KAGLCDKEEPPMVEVEKDHYVACWLYAKA 326
C E PP+V + VAC + A A
Sbjct: 297 -VDRCRAEVPPLVPMPDGRAVACHVRAPA 324
>gb|AAG20448.1| (AE005117) oligopeptide ABC transporter ATP-binding; YkfD
[Halobacterium sp. NRC-1]
Length = 445
Score = 315 bits (798), Expect = 5e-85
Identities = 159/295 (53%), Positives = 213/295 (71%), Gaps = 6/295 (2%)
Query: 2 TETVLKVENLKKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTIL 61
++ +++V +LKK++ G F VKAVDGV+FEI+ GET GLVGESG GKTT GRT++
Sbjct: 16 SQPLVEVTDLKKHYGDGGRFSGPP-VKAVDGVNFEIQEGETLGLVGESGSGKTTLGRTLI 74
Query: 62 RLIEPTDGKIIFMGKDVTKLKGEELKWFRRKAQIMFQDPYSSLDPRQTVFQIIMEPVKFH 121
+L T+G + F G+D+TKL G +LK +R+ AQI+FQDP SSL+ R T+ +I+ EP+ H
Sbjct: 75 QLETATEGTVSFDGRDITKLTGSDLKQWRKNAQIVFQDPDSSLNDRMTIGEIVREPLDAH 134
Query: 122 GIQVD-DPEEFVIRLLESVGLNEMHLYRYPHEFSGGQRQRIALARLLALKPEFIVLDEPT 180
+ + V LL SVGL H YRYPH+FSGGQRQRI +AR LAL+PEF+VLDEP
Sbjct: 135 DWNSPAERRDRVKELLSSVGLQADHYYRYPHQFSGGQRQRIGIARALALEPEFMVLDEPV 194
Query: 181 SALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVGPADRI 240
SALD SVQA ILN L++LQ++ G TYLFI+HDL VV+++ DR+ VMYLGK++E+G + +
Sbjct: 195 SALDASVQAKILNLLEDLQDEFGLTYLFIAHDLSVVRHICDRVAVMYLGKIMEIGETEEL 254
Query: 241 FENPLHPYTQMLFSAIPIPDPDLAREMKKKRMKVTGEPPSPINPPKGCRFHPRCP 295
+ + +PYT+ L SAIP PDP + R R+ + G PPSP NPP GC+F RCP
Sbjct: 255 YADAKNPYTRSLLSAIPRPDPTIDR----NRITLPGAPPSPRNPPAGCQFSTRCP 305
>gb|AAA62693.1| (M57689) sporulation protein [Bacillus subtilis]
>gi|2633501|emb|CAB13004.1| (Z99110) oligopeptide ABC
transporter (ATP-binding protein) [Bacillus subtilis]
Length = 305
Score = 314 bits (796), Expect = 9e-85
Identities = 158/274 (57%), Positives = 206/274 (74%), Gaps = 8/274 (2%)
Query: 1 MTETVLKVENLKKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTI 60
MTE +L++++LK++F G VKAVD +SF+I +GET GLVGESGCGK+TTGR+I
Sbjct: 1 MTEKLLEIKHLKQHF-----VTPRGTVKAVDDLSFDIYKGETLGLVGESGCGKSTTGRSI 55
Query: 61 LRLIEPTDGKIIFMGKDVTKLKG-EELKWFRRKAQIMFQDPYSSLDPRQTVFQIIMEPVK 119
+RL E TDG+++F G++V K ++L F RK Q++FQDPY+SL+PR TV II E +
Sbjct: 56 IRLYEATDGEVLFNGENVHGRKSRKKLLEFNRKMQMIFQDPYASLNPRMTVADIIAEGLD 115
Query: 120 FHGIQVDDPEEF--VIRLLESVGLNEMHLYRYPHEFSGGQRQRIALARLLALKPEFIVLD 177
H + E V LLE+VGLN+ H RYPHEFSGGQRQRI +AR LA+ PEFI+ D
Sbjct: 116 IHKLAKTKKERMQRVHELLETVGLNKEHANRYPHEFSGGQRQRIGIARALAVDPEFIIAD 175
Query: 178 EPTSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVGPA 237
EP SALDVS+QA ++N +KELQ++ G TYLFI+HDL +VKY+SDRIGVMY GKLVE+ PA
Sbjct: 176 EPISALDVSIQAQVVNLMKELQKEKGLTYLFIAHDLSMVKYISDRIGVMYFGKLVELAPA 235
Query: 238 DRIFENPLHPYTQMLFSAIPIPDPDLAREMKKKR 271
D ++ENPLHPYT+ L SAIP+PDPD R +++
Sbjct: 236 DELYENPLHPYTKSLLSAIPLPDPDYERNRVRQK 269
>sp|P24137|OPPF_BACSU OLIGOPEPTIDE TRANSPORT ATP-BINDING PROTEIN OPPF
>gi|98478|pir||E38447 oligopeptide transport ATP-binding
protein oppF - Bacillus subtilis
>gi|143608|gb|AAA62692.1| (M57689) sporulation protein
[Bacillus subtilis]
Length = 308
Score = 313 bits (793), Expect = 2e-84
Identities = 157/274 (57%), Positives = 206/274 (74%), Gaps = 8/274 (2%)
Query: 1 MTETVLKVENLKKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTI 60
+TE +L++++LK++F G VKAVD +SF+I +GET GLVGESGCGK+TTGR+I
Sbjct: 4 LTEKLLEIKHLKQHF-----VTPRGTVKAVDDLSFDIYKGETLGLVGESGCGKSTTGRSI 58
Query: 61 LRLIEPTDGKIIFMGKDVTKLKG-EELKWFRRKAQIMFQDPYSSLDPRQTVFQIIMEPVK 119
+RL E TDG+++F G++V K ++L F RK Q++FQDPY+SL+PR TV II E +
Sbjct: 59 IRLYEATDGEVLFNGENVHGRKSRKKLLEFNRKMQMIFQDPYASLNPRMTVADIIAEGLD 118
Query: 120 FHGIQVDDPEEF--VIRLLESVGLNEMHLYRYPHEFSGGQRQRIALARLLALKPEFIVLD 177
H + E V LLE+VGLN+ H RYPHEFSGGQRQRI +AR LA+ PEFI+ D
Sbjct: 119 IHKLAKTKKERMQRVHELLETVGLNKEHANRYPHEFSGGQRQRIGIARALAVDPEFIIAD 178
Query: 178 EPTSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVGPA 237
EP SALDVS+QA ++N +KELQ++ G TYLFI+HDL +VKY+SDRIGVMY GKLVE+ PA
Sbjct: 179 EPISALDVSIQAQVVNLMKELQKEKGLTYLFIAHDLSMVKYISDRIGVMYFGKLVELAPA 238
Query: 238 DRIFENPLHPYTQMLFSAIPIPDPDLAREMKKKR 271
D ++ENPLHPYT+ L SAIP+PDPD R +++
Sbjct: 239 DELYENPLHPYTKSLLSAIPLPDPDYERNRVRQK 272
>emb|CAA39791.1| (X56347) OppF [Bacillus subtilis]
Length = 307
Score = 312 bits (791), Expect = 4e-84
Identities = 157/268 (58%), Positives = 203/268 (75%), Gaps = 8/268 (2%)
Query: 1 MTETVLKVENLKKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTI 60
+TE +L++++LK++F G VKAVD +SF+I +GET GLVGESGCGK+TTGR+I
Sbjct: 4 LTEKLLEIKHLKQHF-----VTPRGTVKAVDDLSFDIYKGETLGLVGESGCGKSTTGRSI 58
Query: 61 LRLIEPTDGKIIFMGKDVTKLKG-EELKWFRRKAQIMFQDPYSSLDPRQTVFQIIMEPVK 119
+RL E TDG+++F G++V K ++L F RK Q++FQDPY+SL+PR TV II E +
Sbjct: 59 IRLYEATDGEVLFNGENVHGRKSRKKLLEFNRKMQMIFQDPYASLNPRMTVADIIAEGLD 118
Query: 120 FHGIQVDDPEEF--VIRLLESVGLNEMHLYRYPHEFSGGQRQRIALARLLALKPEFIVLD 177
H + E V LLE+VGLN+ H RYPHEFSGGQRQRI +AR LA+ PEFI+ D
Sbjct: 119 IHKLAKTKKERMQRVHELLETVGLNKEHANRYPHEFSGGQRQRIGIARALAVDPEFIIAD 178
Query: 178 EPTSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVGPA 237
EP SALDVS+QA ++N +KELQ++ G TYLFI+HDL +VKY+SDRIGVMY GKLVE+ PA
Sbjct: 179 EPISALDVSIQAQVVNLMKELQKEKGLTYLFIAHDLSMVKYISDRIGVMYFGKLVELAPA 238
Query: 238 DRIFENPLHPYTQMLFSAIPIPDPDLAR 265
D ++ENPLHPYT+ L SAIP+PDPD R
Sbjct: 239 DELYENPLHPYTKSLLSAIPLPDPDYER 266
>emb|CAC05751.1| (AL391751) putative peptide transport system ATP-binding protein
[Streptomyces coelicolor]
Length = 356
Score = 310 bits (787), Expect = 1e-83
Identities = 160/313 (51%), Positives = 218/313 (69%), Gaps = 8/313 (2%)
Query: 2 TETVLKVENLKKYFPIRG--LFRT-IGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGR 58
TE +L+V L K++P+ LF+ +G VKAVDGV F + RGET G+VGESGCGK+T +
Sbjct: 5 TEPILEVRGLVKHYPLTSGILFKKQVGAVKAVDGVDFRLARGETLGIVGESGCGKSTVAK 64
Query: 59 TILRLIEPTDGKIIFMGKDVTKLKGEELKWFRRKAQIMFQDPYSSLDPRQTVFQIIMEPV 118
++ L PT G+I + G+D+T+L G LK RR Q++FQDPY+SL+PR TV II E
Sbjct: 65 MLVNLERPTAGEIRYKGEDITRLSGRALKSVRRNIQMVFQDPYTSLNPRMTVGDIIGEAY 124
Query: 119 KFHG--IQVDDPEEFVIRLLESVGLNEMHLYRYPHEFSGGQRQRIALARLLALKPEFIVL 176
H D V LL+ VGLN ++ RYPH+FSGGQRQRI +AR LAL+PE IV
Sbjct: 125 DIHPEVAPKGDRRRRVQDLLDVVGLNPEYINRYPHQFSGGQRQRIGIARGLALRPEIIVA 184
Query: 177 DEPTSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVGP 236
DEP SALDVSVQA ++N + LQ++ +Y+FI+HDL +V+++SDR+GVMYLG++VE G
Sbjct: 185 DEPVSALDVSVQAQVINLMARLQDEFDLSYIFIAHDLSIVRHISDRVGVMYLGRIVETGR 244
Query: 237 ADRIFENPLHPYTQMLFSAIPIPDPDLAREMKKKRMKVTGEPPSPINPPKGCRFHPRCPY 296
+ I+++P HPYTQ L SA+P+PDP+ ARE ++R+ ++G+ PSP N P GCRF RC
Sbjct: 245 DEEIYDHPTHPYTQALLSAVPVPDPE-ARE-HRERIILSGDVPSPTNIPSGCRFRTRCWK 302
Query: 297 AKAGLCDKEEPPM 309
A+ C E P +
Sbjct: 303 ARE-RCALEVPAL 314
>gb|AAG20587.1| (AE005129) dipeptide ABC transporter ATP-binding; DppF
[Halobacterium sp. NRC-1]
Length = 943
Score = 309 bits (784), Expect = 2e-83
Identities = 159/312 (50%), Positives = 208/312 (65%), Gaps = 27/312 (8%)
Query: 3 ETVLKVENLKKYFPIRGLFRTIGW-----------VKAVDGVSFEIKRGETFGLVGESGC 51
E +L L+K+F R GW VKAVDGV ++ GET GLVGESGC
Sbjct: 502 EPLLSSRGLEKHFS-----RADGWLDSMLGGDQEPVKAVDGVDLDVYEGETLGLVGESGC 556
Query: 52 GKTTTGRTILRLIEPTDGKIIFMGKDVTKLKGEELKWFRRKAQIMFQDPYSSLDPRQTVF 111
GK+TTGR+ILRL+EPTDG+++F G DVT L +EL+ R Q++FQDP SSLDPRQ++
Sbjct: 557 GKSTTGRSILRLVEPTDGRVVFAGDDVTDLNDDELRATRTDMQMIFQDPLSSLDPRQSIG 616
Query: 112 QIIMEPVKFHGIQVDDPEEF--------VIRLLESVGLNEMHLYRYPHEFSGGQRQRIAL 163
I+EP++ H + + + VI L+++VGL+ RYPHE SGGQRQR+ +
Sbjct: 617 DTILEPLQIHDLPANPGAQSTRQARRDRVIDLMDAVGLDPSQYDRYPHELSGGQRQRVGI 676
Query: 164 ARLLALKPEFIVLDEPTSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRI 223
AR LA+ P+FIV DEP SALDVSVQA ILN L++LQ++ TYLFI+HDL VV+++ DRI
Sbjct: 677 ARALAVDPDFIVADEPVSALDVSVQAQILNLLEDLQDEFDLTYLFIAHDLSVVRHICDRI 736
Query: 224 GVMYLGKLVEVGPADRIFENPLHPYTQMLFSAIPIPDPDLAREMKKKRMKVTGEPPSPIN 283
VMYLGK+VE ++F P HPYT+ L S+IP PDP + R+ + G+ PSPI+
Sbjct: 737 AVMYLGKIVETAQTAQLFSTPKHPYTKSLLSSIPDPDPLATTD---DRIILEGDVPSPID 793
Query: 284 PPKGCRFHPRCP 295
PP GCRF RCP
Sbjct: 794 PPSGCRFRTRCP 805
Score = 174 bits (436), Expect = 2e-42
Identities = 96/239 (40%), Positives = 138/239 (57%), Gaps = 30/239 (12%)
Query: 95 IMFQDPYSSLDPRQTVFQIIMEPVKFH----------------GIQVDDPEEFVIR---- 134
++FQDP +SL+P TV + + E ++ H I D +E V+
Sbjct: 233 MIFQDPMTSLNPSLTVGEQVAESLRLHRYGEQPTDSWLNGLRAAISRGDTDEQVVADVVD 292
Query: 135 LLESVGLNE--MHLYRYPHEFSGGQRQRIALARLLALKPEFIVLDEPTSALDVSVQANIL 192
+L++VG+ E L YPHEFSGG RQR+ +A LA +P ++ DEPT+ALDV++QA IL
Sbjct: 293 VLDAVGIPEPETRLDEYPHEFSGGMRQRVLIAIALACRPRLLIADEPTTALDVTIQAQIL 352
Query: 193 NTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVGPADRIFENPLHPYTQML 252
+ + +LQ++ G + LFI+HDLGVV DR+ VMY G++VE GP + IF NP HPYT L
Sbjct: 353 DRISDLQDEFGMSVLFITHDLGVVAETCDRVAVMYAGEIVEEGPVEEIFHNPSHPYTYAL 412
Query: 253 FSAIPIPDPDLAREMKKKRMKVTGEPPSPINPPKGCRFHPRCPYAKAGLCDKEEPPMVE 311
+IP D D + + G P I+ P GC F RCP+A + C ++ P +E
Sbjct: 413 LESIPRDDAD-------RLHPIEGNVPDLIDLPSGCHFEARCPWA-SDACVGDDIPYME 463
>gb|AAC64256.1| (AF042861) putative OppF [Treponema denticola]
Length = 385
Score = 309 bits (783), Expect = 3e-83
Identities = 159/297 (53%), Positives = 210/297 (70%), Gaps = 6/297 (2%)
Query: 27 VKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTILRLIEPTDGKIIFMGKDVTKLKGEEL 86
V A DG+ I GET GLVGESGCGK+T GRTIL+L +PT G+I F G+++T ++
Sbjct: 85 VIANDGIDLVIHEGETVGLVGESGCGKSTLGRTILKLYKPTAGEIFFEGENITNYTVTQM 144
Query: 87 KWFRRKAQIMFQDPYSSLDPRQTVFQIIMEPVKFHGI-QVDDP--EEFVIRLLESVGLNE 143
R+K QI+FQDPYSSL+P+ TV QII E + HG+ + DP E++V ++ + GL +
Sbjct: 145 MPLRKKMQIIFQDPYSSLNPKMTVGQIIGEALLEHGMFKKKDPAYEKYVKEIMNTCGLAD 204
Query: 144 MHLYRYPHEFSGGQRQRIALARLLALKPEFIVLDEPTSALDVSVQANILNTLKELQEKHG 203
+YRYPHEFSGGQRQRI +AR LALKP+FIV DE SALDVS+Q+ I+N L +LQ++
Sbjct: 205 YMIYRYPHEFSGGQRQRIGIARALALKPKFIVCDEAVSALDVSIQSQIINLLNDLQKEFN 264
Query: 204 FTYLFISHDLGVVKYMSDRIGVMYLGKLVEVGPADRIFENPLHPYTQMLFSAIPIPDPDL 263
+YLFISHDL VVK++SDRIGVMYLG +VE ++ NPLHPYT++L SA IP+ DL
Sbjct: 265 LSYLFISHDLSVVKHISDRIGVMYLGNMVEFTDKREMYANPLHPYTKVLLSA--IPETDL 322
Query: 264 AREMKKKRMKVTGEPPSPINPPKGCRFHPRCPYAKAGLCDKEEPPMVEVEKDHYVAC 320
+ K+R+ + G+ PS I P GC+FH RCP AK +C +E P E + H+VAC
Sbjct: 323 QKMRTKRRILLEGDIPSNIITPTGCKFHTRCPIAK-DICKREIPQFKEEKPGHFVAC 378
>gb|AAG22038.1|AF305387_5 (AF305387) OppF [Bacillus thuringiensis]
Length = 311
Score = 307 bits (778), Expect = 1e-82
Identities = 152/270 (56%), Positives = 204/270 (75%), Gaps = 8/270 (2%)
Query: 3 ETVLKVENLKKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTILR 62
E +++V+N+K++F + G G VKAV+ +SF+I RGETFGLVGESGCGK+TTGRTI+R
Sbjct: 6 EKLIEVKNVKQHFDVSG-----GVVKAVNDISFDIYRGETFGLVGESGCGKSTTGRTIIR 60
Query: 63 LIEPTDGKIIFMGKDVTKLKGE-ELKWFRRKAQIMFQDPYSSLDPRQTVFQIIMEPVKFH 121
L + T G+++F G++V K ELK F RK Q++FQDPY+SL+PR TV II E + H
Sbjct: 61 LYDATAGEVLFDGENVHGKKSRAELKKFNRKMQMIFQDPYASLNPRMTVGDIIAEGIDIH 120
Query: 122 GIQVDDPEEF--VIRLLESVGLNEMHLYRYPHEFSGGQRQRIALARLLALKPEFIVLDEP 179
G+ E V LL +VGLN+ H R+PHEFSGGQRQRI +AR LA++PEFI+ DEP
Sbjct: 121 GLAKSKKERMDRVHELLNTVGLNKEHANRFPHEFSGGQRQRIGIARALAVEPEFIIADEP 180
Query: 180 TSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVGPADR 239
SALDVS+QA ++N LK+LQ++ G TYLFI+HDL +VKY+SDRIGVMY G++VE+ ++
Sbjct: 181 ISALDVSIQAQVVNLLKKLQKEKGLTYLFIAHDLSMVKYISDRIGVMYRGQIVELTTSEE 240
Query: 240 IFENPLHPYTQMLFSAIPIPDPDLAREMKK 269
++ NP+HPYT+ L SAIP+PDPD R K+
Sbjct: 241 LYANPVHPYTKSLLSAIPLPDPDYERNRKR 270
>sp|P45094|DPPF_HAEIN DIPEPTIDE TRANSPORT ATP-BINDING PROTEIN DPPF
>gi|1074010|pir||E64188 dipeptide transport ATP-binding
protein dppF - Haemophilus influenzae (strain Rd KW20)
>gi|972898|gb|AAA95975.1| (U17295) DppF [Haemophilus
influenzae] >gi|1574111|gb|AAC22837.1| (U32798)
dipeptide ABC transporter, ATP-binding protein (dppF)
[Haemophilus influenzae Rd]
Length = 327
Score = 295 bits (747), Expect = 5e-79
Identities = 150/319 (47%), Positives = 215/319 (67%), Gaps = 7/319 (2%)
Query: 5 VLKVENLKKYFPIR-GLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTILRL 63
+L LKKY+P++ GLF VKA+DGVSF+++RG+T +VGESGCGK+T GR + +
Sbjct: 11 LLNAIGLKKYYPVKKGLFAKPQQVKALDGVSFQLERGKTLAVVGESGCGKSTLGRLLTMI 70
Query: 64 IEPTDGKIIFMGKDVTKLKGEELKWFRRKAQIMFQDPYSSLDPRQTVFQIIMEPVKFHG- 122
EPT G++ + G + + E R+K QI+FQ+PY+SL+PR+ + I+ EP+ +
Sbjct: 71 EEPTKGELYYKGHNFLENDSETKALRRKKIQIVFQNPYASLNPRKKIGSILEEPLIINTK 130
Query: 123 IQVDDPEEFVIRLLESVGLNEMHLYRYPHEFSGGQRQRIALARLLALKPEFIVLDEPTSA 182
+ + E V+ ++E VGL RYPH FSGGQRQRIA+AR L L P+ +V DEP SA
Sbjct: 131 LSAKERREKVLSMMEKVGLRAEFYDRYPHMFSGGQRQRIAIARGLMLDPDVVVADEPVSA 190
Query: 183 LDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVGPADRIFE 242
LDVSV+A +LN + +LQ++ G +Y+FISHDL VV++++D + VMYLG+ +E G ++IF
Sbjct: 191 LDVSVRAQVLNLMMDLQDELGLSYVFISHDLSVVEHIADEVMVMYLGRCIEKGTTEQIFS 250
Query: 243 NPLHPYTQMLFSAIPIPDPDLAREMKKKRMKVTGEPPSPINPPKGCRFHPRCPYAKAGLC 302
NP HPYT+ L SA P P+L RE R+K+TGE PSPINPPKGC F+PRC + C
Sbjct: 251 NPQHPYTKALLSATPRLSPNLRRE----RIKLTGELPSPINPPKGCAFNPRC-WKATEKC 305
Query: 303 DKEEPPMVEVEKDHYVACW 321
+ +P + + +AC+
Sbjct: 306 RENQPHLEQHTDGKLIACF 324
>pir||G71211 probable oligopeptide transport ATP-binding protein appD -
Pyrococcus horikoshii >gi|3258403|dbj|BAA31086.1|
(AP000007) 322aa long hypothetical oligopeptide
transport ATP-binding protein appD [Pyrococcus
horikoshii]
Length = 322
Score = 294 bits (744), Expect = 1e-78
Identities = 150/331 (45%), Positives = 221/331 (66%), Gaps = 22/331 (6%)
Query: 1 MTETVLKVENLKKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTI 60
M + +L+V+NLK Y+ F + G VKAVD V+F++++GE GL GESGCGK++ G T+
Sbjct: 4 MGKKILEVKNLKMYY-----FTSRGPVKAVDDVTFDLEKGEVLGLAGESGCGKSSIGFTL 58
Query: 61 LRLIEP----TDGKIIFMGKDVTKLKGE----ELKWFRRKAQIMFQDPYSSLDPRQTVFQ 112
+ + +P G I G+++ L + E++W +K ++FQ ++L+P TV
Sbjct: 59 MGMPQPPGRIVGGSIKIDGREIVGLPEDVLRREIRW--QKISMIFQGAMNALNPVYTVGY 116
Query: 113 IIMEPVKFH-GIQVDDPEEFVIRLLESVGLNEMHLYRYPHEFSGGQRQRIALARLLALKP 171
++EP+ +H G+ +D + ++ LE VGL+ +YRYPHE SGG +QR+ +A L L+P
Sbjct: 117 QMIEPLIYHKGMDREDALDRAMKYLELVGLDPEIVYRYPHELSGGMKQRVVIAMALLLEP 176
Query: 172 EFIVLDEPTSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKL 231
+ ++ DEPT+ALDV VQA I+N +K L++K G + +FI+HDL ++ +SDR+ VMY GKL
Sbjct: 177 DIVIADEPTTALDVVVQAQIINLMKRLKKKLGLSMIFITHDLSILAEISDRVAVMYAGKL 236
Query: 232 VEVGPADRIFENPLHPYTQMLFSAIPIPDPDLAREMKKKRMKVTGEPPSPINPPKGCRFH 291
VE+GP+++I+ P HPYTQ L +AIP D+ +K + G PP+ INPP GCRFH
Sbjct: 237 VEIGPSEKIYYEPAHPYTQKLLAAIPRLHEDV-----EKLEFIPGSPPNLINPPSGCRFH 291
Query: 292 PRCPYAKAGLCDKEEPPMVEVEKDHYVACWL 322
PRCPYA C +EEP MVEV+KDHY ACWL
Sbjct: 292 PRCPYA-MDKCKEEEPKMVEVDKDHYAACWL 321
>pir||C72536 probable oligopeptide transport ATP-binding protein APE1576 -
Aeropyrum pernix (strain K1) >gi|5105263|dbj|BAA80576.1|
(AP000062) 377aa long hypothetical oligopeptide
transport ATP-binding protein [Aeropyrum pernix]
Length = 377
Score = 292 bits (740), Expect = 3e-78
Identities = 163/357 (45%), Positives = 216/357 (59%), Gaps = 40/357 (11%)
Query: 5 VLKVENLKKYFPIRGLFRTI------GWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGR 58
VL+VE+L+ +FP+R + +VKAVDGVSF I RGE F LVGESGCGKTTTG+
Sbjct: 19 VLRVEDLRVWFPLRRSITELITMKPQRFVKAVDGVSFSIARGEVFCLVGESGCGKTTTGK 78
Query: 59 TILRLIEPTDGKIIFMGK--------------------DVTKLKGEELKWFRRKAQIMFQ 98
ILRL++ T G++ F K D+ + + K RR+ QI++Q
Sbjct: 79 AILRLVKATGGRVFFKPKKEVLEELERRGVKSLGDGFVDLLAVPRRKFKPLRRELQIVYQ 138
Query: 99 DPYSSLDPRQTVFQIIMEPVKFHGI-QVDDPEEFVIRLLESVGLNEMHLY--RYPHEFSG 155
DPY SL+PR T+ +I+ +P+ H I + EE V R+LE+V L + RYPH+ SG
Sbjct: 139 DPYGSLNPRFTIKRILEDPLLIHSIGNAREREEMVARMLEAVKLTPASDFMDRYPHQLSG 198
Query: 156 GQRQRIALARLLALKPEFIVLDEPTSALDVSVQANILNTLKELQEKHGFTYLFISHDLGV 215
GQRQR+A+AR L P +V DEP S LDVS++A IL L +EK G + LFI+HDL V
Sbjct: 199 GQRQRVAIARAFILNPSLVVADEPVSMLDVSIRAEILELLLGFREKLGTSLLFITHDLAV 258
Query: 216 VKYMSDRIGVMYLGKLVEVGPADRIFENPLHPYTQMLFSAIPIPDPDLAREMKKKRMKVT 275
+Y+ DRI VMYLGK+VE G A RI E P+HPYT+ L +AIP PDP + K + + +
Sbjct: 259 ARYICDRIAVMYLGKIVETGDARRIIERPIHPYTKALVAAIPEPDP--SNRKKLREVPIK 316
Query: 276 GEPPSPINPPKGCRFHPRCPYAKAG------LCDKEEPPM---VEVEKDHYVACWLY 323
GE PS P GCRFHPRC + +C +EPP+ E E+D V+CW Y
Sbjct: 317 GEIPSAAAIPPGCRFHPRCVEYEQDMDRLREMCPVKEPPLKRPTEGEEDRRVSCWRY 373
>pir||F83082 probable ATP-binding component of ABC dipeptide transporter PA4506
[imported] - Pseudomonas aeruginosa (strain PAO1)
>gi|9950746|gb|AAG07894.1|AE004864_6 (AE004864) probable
ATP-binding component of ABC dipeptide transporter
[Pseudomonas aeruginosa]
Length = 323
Score = 292 bits (739), Expect = 5e-78
Identities = 145/320 (45%), Positives = 214/320 (66%), Gaps = 8/320 (2%)
Query: 3 ETVLKVENLKKYFPI-RGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTIL 61
ETVL +L +++ + RGLF+ V+A++GVSFE++ G+T +VGESGCGK+T R +
Sbjct: 2 ETVLTARDLTRHYEVSRGLFKGHAQVRALNGVSFELEAGKTLAVVGESGCGKSTLARALT 61
Query: 62 RLIEPTDGKIIFMGKDVTKLKGEELKWFRRKAQIMFQDPYSSLDPRQTVFQIIMEPVKFH 121
+ EPT G + G++V ++ + RR Q++FQ+PY+SL+PRQ + + EP+ +
Sbjct: 62 LIEEPTSGSLKIAGQEVKGASKDQRRQLRRDVQMVFQNPYASLNPRQKIGDQLAEPLLIN 121
Query: 122 -GIQVDDPEEFVIRLLESVGLNEMHLYRYPHEFSGGQRQRIALARLLALKPEFIVLDEPT 180
+ ++ E V +++ VGL H RYPH FSGGQRQRIALAR + L+P+ +V DEPT
Sbjct: 122 TALSREERREKVQQMMRQVGLRPEHYQRYPHMFSGGQRQRIALARAMMLQPKVLVADEPT 181
Query: 181 SALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVGPADRI 240
SALDVS+QA +LN +LQ++ Y+FISH+L VV++++D + VMYLG+ E+GPAD++
Sbjct: 182 SALDVSIQAQVLNLFMDLQQQFRTAYVFISHNLAVVRHVADDVLVMYLGRPAEMGPADKL 241
Query: 241 FENPLHPYTQMLFSAIPIPDPDLAREMKKKRMKVTGEPPSPINPPKGCRFHPRCPYAKAG 300
+ENPLHPYT+ L SA P PD K ++++ GE P+P+NPP+GC FH RCPYA
Sbjct: 242 YENPLHPYTRALLSATPAIHPD----PTKPKIRIQGELPNPLNPPEGCAFHKRCPYATER 297
Query: 301 LCDKEEPPMVEVEKDHYVAC 320
+ E P + + VAC
Sbjct: 298 C--RSEVPELRLLDQRQVAC 315
>pir||G75026 oligopeptide transport ATP-binding protein appd. PAB1196 -
Pyrococcus abyssi (strain Orsay)
>gi|5459167|emb|CAB50653.1| (AJ248288) OLIGOPEPTIDE
TRANSPORT ATP-BINDING PROTEIN APPD. [Pyrococcus abyssi]
Length = 319
Score = 292 bits (739), Expect = 5e-78
Identities = 146/331 (44%), Positives = 221/331 (66%), Gaps = 22/331 (6%)
Query: 1 MTETVLKVENLKKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTI 60
M + +L+V+NLK Y+ F + G VKAVD V+F++++GE GL GESGCGK++ G T+
Sbjct: 1 MAKKILEVKNLKMYY-----FTSRGPVKAVDDVTFDLEKGEVLGLAGESGCGKSSIGFTL 55
Query: 61 LRLIEP----TDGKIIFMGKDVTKLKGE----ELKWFRRKAQIMFQDPYSSLDPRQTVFQ 112
+ + +P G I G+++ L + E++W +K ++FQ ++L+P TV
Sbjct: 56 MGMPQPPGRIVSGSIKIDGREIVGLPEDVLRKEIRW--QKISMIFQGAMNALNPVYTVGY 113
Query: 113 IIMEPVKFH-GIQVDDPEEFVIRLLESVGLNEMHLYRYPHEFSGGQRQRIALARLLALKP 171
++EP+ +H G+ +D + ++ LE VGL+ +YRYPHE SGG +QR+ +A L L+P
Sbjct: 114 QMIEPLIYHRGMSREDALDRAMKYLELVGLDPEIVYRYPHELSGGMKQRVVIATALILEP 173
Query: 172 EFIVLDEPTSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKL 231
+ ++ DEPT+ALDV VQA I+N +K L++K G + +FI+HDL ++ +SD+I +MY GK+
Sbjct: 174 DIVIADEPTTALDVVVQAQIINLMKRLKKKLGLSMIFITHDLSILAEISDKIAIMYAGKI 233
Query: 232 VEVGPADRIFENPLHPYTQMLFSAIPIPDPDLAREMKKKRMKVTGEPPSPINPPKGCRFH 291
VE+GP+++++ P HPYTQ L +AIP D+ +K + G PP+ +NPP GCRFH
Sbjct: 234 VEIGPSEKVYYEPAHPYTQKLLAAIPRLHEDV-----EKLEFIPGSPPNLLNPPSGCRFH 288
Query: 292 PRCPYAKAGLCDKEEPPMVEVEKDHYVACWL 322
PRCPYA C +EEP MVEV+KDHY ACWL
Sbjct: 289 PRCPYA-MDRCKEEEPKMVEVDKDHYAACWL 318
>gi|11499360 dipeptide ABC transporter, ATP-binding protein (dppF)
[Archaeoglobus fulgidus] >gi|7442541|pir||B69471
dipeptide transport ATP-binding protein dppF -
Archaeoglobus fulgidus >gi|2648778|gb|AAB89479.1|
(AE000980) dipeptide ABC transporter, ATP-binding
protein (dppF) [Archaeoglobus fulgidus]
Length = 323
Score = 292 bits (739), Expect = 5e-78
Identities = 148/324 (45%), Positives = 215/324 (65%), Gaps = 17/324 (5%)
Query: 5 VLKVENLKKYFPIRGLFRTI------GWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGR 58
+L+VENLKKYFP++ + +V+AVDGVSFE+K+GE LVGESGCGKTTTGR
Sbjct: 1 MLRVENLKKYFPVQKSVLEVLLSGRRDFVRAVDGVSFEMKQGEVLSLVGESGCGKTTTGR 60
Query: 59 TILRLIEPTDGKIIFMGKDVTKLKGEELKWFRRKAQIMFQDPYSSLDPRQTVFQIIMEPV 118
I+ L PT GKI F +++T L EE + +R Q++FQDPY+SL+PR + + ++E +
Sbjct: 61 IIVGLERPTSGKIYFKDREITSLSEEEQRRMKRHIQMVFQDPYASLNPRMKIGEHLVESL 120
Query: 119 KFHGI-QVDDPEEFVIRLLESVGL-NEMHLYRYPHEFSGGQRQRIALARLLALKPEFIVL 176
HGI + D+ E + +L+ VGL E R P++ SGGQRQR+A+AR + LKP+F+V
Sbjct: 121 TIHGIAENDEAREMAMSMLDRVGLPGEQFFNRMPYQLSGGQRQRVAIARAMILKPDFVVA 180
Query: 177 DEPTSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVGP 236
DEP S +DVS++A IL+ L ++++ + LFI+HDL V + + DRI VMYLGK++E+G
Sbjct: 181 DEPVSMIDVSLRAAILDLLMSFRDEYNLSMLFITHDLSVARIVGDRIAVMYLGKIMEIGK 240
Query: 237 ADRIFENPLHPYTQMLFSAIPIPDPDLAREMKKKRMKVTGEPPSPINPPKGCRFHPRCPY 296
+ NP HPYT L S++P + K +++++ G+ +PI+ P GCR+HPRCP+
Sbjct: 241 TREVIHNPRHPYTAALLSSVP------SFVKKGRKVEIIGDIANPIDIPSGCRYHPRCPF 294
Query: 297 AKAGLCDKEEPPMVEVEKDHYVAC 320
A+ C KEEP + E H AC
Sbjct: 295 ARE-KCKKEEPELEGGE--HSFAC 315
>pir||C72720 probable oligopeptide transport ATP-binding protein oppF APE0300 -
Aeropyrum pernix (strain K1) >gi|5103939|dbj|BAA79255.1|
(AP000059) 420aa long hypothetical oligopeptide
transport ATP-binding protein oppF [Aeropyrum pernix]
Length = 420
Score = 291 bits (738), Expect = 6e-78
Identities = 161/337 (47%), Positives = 210/337 (61%), Gaps = 44/337 (13%)
Query: 6 LKVENLKKYFPIRGLF--RTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTILRL 63
L + +++ YFPI + + IG+VKAVDGVS +K+GE G+VGESG GKTT +TI+ L
Sbjct: 5 LALHDVRVYFPITTFYLKKVIGYVKAVDGVSLSLKKGEILGVVGESGSGKTTLAKTIIGL 64
Query: 64 IEPTDGKIIFMGKDVTKL-----------KGEEL-------------------------K 87
P G + F+ D +L +GE + K
Sbjct: 65 HRPFTGHV-FIDIDKGELEEAVSIYEALKRGENVQREDIKRYRKIIKTHDPYYMDRSNYK 123
Query: 88 WFRRKAQIMFQDPYSSLDPRQTVFQIIMEPVKFHGIQVDDP--EEFVIRLLESVGLNEMH 145
FRRK Q++ QDPYSSL+PR V +II EPV+ HGI+ + VI +LE+VGL +
Sbjct: 124 KFRRKVQMVQQDPYSSLNPRMKVGEIIGEPVRVHGIEKSSEGVKRRVIEVLEAVGLGKEF 183
Query: 146 LYRYPHEFSGGQRQRIALARLLALKPEFIVLDEPTSALDVSVQANILNTLKELQEKHGFT 205
RYP+E SGGQRQR+A+AR LAL P+ +VLDEPTSALDVS+QA IL L+EL +K+G T
Sbjct: 184 ADRYPYELSGGQRQRVAIARALALNPKILVLDEPTSALDVSIQAQILRLLRELWKKYGLT 243
Query: 206 YLFISHDLGVVKYMSDRIGVMYLGKLVEVGPADRIFENPLHPYTQMLFSAIPIPDPDLAR 265
YL I+HD+ VV+YMS + VMY GK++E P +F NPLHPYT++L SA+PIPDP R
Sbjct: 244 YLLITHDISVVRYMSSSVVVMYSGKIMESAPKHILFTNPLHPYTKLLLSAVPIPDP---R 300
Query: 266 EMKKKRMKVTGEPPSPINPPKGCRFHPRCPYAKAGLC 302
+ K K GEPP+P PP GCRF RCP A +C
Sbjct: 301 SRRIKEFKDIGEPPNPAKPPVGCRFVTRCPIASREIC 337
>gb|AAG20461.1| (AE005118) oligopeptide ABC transporter ATP-binding; AppF
[Halobacterium sp. NRC-1]
Length = 440
Score = 291 bits (737), Expect = 8e-78
Identities = 147/296 (49%), Positives = 200/296 (66%), Gaps = 7/296 (2%)
Query: 3 ETVLKVENLKKYFPI-RGLFRT-IGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTI 60
E++++V+ LKK++PI G+ RT +G V+AVDGVSFE++ GET G+VGESGCGK+T ++
Sbjct: 14 ESLMRVDGLKKHYPITEGVLRTEVGRVRAVDGVSFEVRAGETLGIVGESGCGKSTVAESV 73
Query: 61 LRLIEPTDGKIIFMGKDVTKLKGEELKWFRRKAQIMFQDPYSSLDPRQTVFQIIMEPVKF 120
LRL +PT G + F G+DVT LK FRR+AQ++FQ+P SS DPR T + + EP+K
Sbjct: 74 LRLTDPTAGSVYFDGEDVTAYDDTALKRFRREAQMIFQNPDSSFDPRMTTGESVAEPLKI 133
Query: 121 HGIQVDDPEEFVIR-LLESVGLNEMHLYRYPHEFSGGQRQRIALARLLALKPEFIVLDEP 179
HG+ + R LLE VG++ RYPHE SGGQ+QR+ALAR L + P IV DEP
Sbjct: 134 HGVGPRSRRLEIARDLLERVGMSGEDAARYPHELSGGQKQRVALARALVVNPRLIVADEP 193
Query: 180 TSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVGPADR 239
SALDVSVQA +L L ++Q + LFISHD+GVV+ + DR+ VMYLG++VE+G +
Sbjct: 194 VSALDVSVQAEVLTLLNDIQAEFNLGVLFISHDMGVVREVCDRVAVMYLGEIVEMGRTED 253
Query: 240 IFENPLHPYTQMLFSAIPIPDPDLAREMKKKRMKVTGEPPSPINPPKGCRFHPRCP 295
+F +P HPYT+ L +I P + E + + GE P P +PP GC FH RCP
Sbjct: 254 VFNDPEHPYTRALLRSI----PTVGVESRGTDAGLRGEVPPPSDPPTGCNFHTRCP 305
>sp|P08007|OPPF_SALTY OLIGOPEPTIDE TRANSPORT ATP-BINDING PROTEIN OPPF
>gi|72454|pir||QREBOF oligopeptide transport protein
oppF - Salmonella typhimurium >gi|47806|emb|CAA29043.1|
(X05491) Opp F (AA1-334) [Salmonella typhimurium]
Length = 334
Score = 290 bits (735), Expect = 1e-77
Identities = 151/324 (46%), Positives = 217/324 (66%), Gaps = 10/324 (3%)
Query: 3 ETVLKVENLKKYFPIRG----LFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGR 58
+ +L++ +LK +F I+ ++ +KAVDGV+ + GET G+VGESGCGK+T R
Sbjct: 9 KVLLEIADLKVHFDIKEGKQWFWQPPKTLKAVDGVTLRLYEGETLGVVGESGCGKSTFAR 68
Query: 59 TILRLIEPTDGKIIFMGKDVTKLKGEELKWFRRKAQIMFQDPYSSLDPRQTVFQIIMEPV 118
I+ L++ TDGK+ ++GKD+ +K +E + R Q++FQDP +SL+PR T+ +II EP+
Sbjct: 69 AIIGLVKATDGKVAWLGKDLLGMKADEWREVRSDIQMIFQDPLASLNPRMTIGEIIAEPL 128
Query: 119 KFHGIQVD--DPEEFVIRLLESVGLNEMHLYRYPHEFSGGQRQRIALARLLALKPEFIVL 176
+ + ++ D + V ++ VGL + RYPHEFSGGQ QRI +AR L L+P+ I+
Sbjct: 129 RTYHPKLSRQDVRDRVKAMMLKVGLLPNLINRYPHEFSGGQCQRIGIARALILEPKLIIC 188
Query: 177 DEPTSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVGP 236
D+ SALDVS+QA ++N L++LQ + G + +FI+HDL VVK++SDR+ VMYLG VE+G
Sbjct: 189 DDAVSALDVSIQAQVVNLLQQLQREMGLSLIFIAHDLAVVKHISDRVLVMYLGHAVELGT 248
Query: 237 ADRIFENPLHPYTQMLFSAIPIPDPDLAREMKKKRMKVTGEPPSPINPPKGCRFHPRCPY 296
D ++ NPLHPYT+ L SA+PIPDPDL E KK + GE PSPINPP GC F RCP
Sbjct: 249 YDEVYHNPLHPYTKALMSAVPIPDPDL--ERNKKIQLLEGELPSPINPPSGCVFRTRCPI 306
Query: 297 AKAGLCDKEEPPMVEVEKDHYVAC 320
AG + P++E H V+C
Sbjct: 307 --AGPECAQTRPVLEGSFRHAVSC 328
>sp|P37313|DPPF_ECOLI DIPEPTIDE TRANSPORT ATP-BINDING PROTEIN DPPF
>gi|1073370|pir||S47762 dipeptide transport protein dppF
- Escherichia coli >gi|466679|gb|AAB18518.1| (U00039)
was dppE [Escherichia coli] >gi|1789962|gb|AAC76565.1|
(AE000431) putative ATP-binding component of dipeptide
transport system [Escherichia coli K12]
Length = 334
Score = 290 bits (735), Expect = 1e-77
Identities = 150/323 (46%), Positives = 218/323 (67%), Gaps = 8/323 (2%)
Query: 1 MTETVLKVENLKKYFPIR-GLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRT 59
+ + +L+ +LKK++P++ G+F VKA+DGVSF ++RG+T +VGESGCGK+T GR
Sbjct: 8 LQQPLLQAIDLKKHYPVKKGMFAPERLVKALDGVSFNLERGKTLAVVGESGCGKSTLGRL 67
Query: 60 ILRLIEPTDGKIIFMGKDVTKLKGEELKWFRRKAQIMFQDPYSSLDPRQTVFQIIMEPVK 119
+ + PT G++ + G+D+ K + K R+K QI+FQ+PY SL+PR+ V QI+ EP+
Sbjct: 68 LTMIEMPTGGELYYQGQDLLKHDPQAQKLRRQKIQIVFQNPYGSLNPRKKVGQILEEPLL 127
Query: 120 FH-GIQVDDPEEFVIRLLESVGLNEMHLYRYPHEFSGGQRQRIALARLLALKPEFIVLDE 178
+ + + E + ++ VGL H RYPH FSGGQRQRIA+AR L L P+ ++ DE
Sbjct: 128 INTSLSKEQRREKALSMMAKVGLKTEHYDRYPHMFSGGQRQRIAIARGLMLDPDVVIADE 187
Query: 179 PTSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVGPAD 238
P SALDVSV+A +LN + +LQ++ G +Y+FISHDL VV++++D + VMYLG+ VE G D
Sbjct: 188 PVSALDVSVRAQVLNLMMDLQQELGLSYVFISHDLSVVEHIADEVMVMYLGRCVEKGTKD 247
Query: 239 RIFENPLHPYTQMLFSAIPIPDPDLAREMKKKRMKVTGEPPSPINPPKGCRFHPRCPYAK 298
+IF NP HPYTQ L SA P +PD RE R+K++GE PSP+NPP GC F+ RC +
Sbjct: 248 QIFNNPRHPYTQALLSATPRLNPDDRRE----RIKLSGELPSPLNPPPGCAFNARC-RRR 302
Query: 299 AGLCDKEEPPMVEVEKDHYVACW 321
G C + +P + + VAC+
Sbjct: 303 FGPCTQLQPQLKDY-GGQLVACF 324
>gb|AAA23706.1| (L08399) peripheral membrane protein [Escherichia coli]
Length = 333
Score = 290 bits (734), Expect = 2e-77
Identities = 147/311 (47%), Positives = 213/311 (68%), Gaps = 7/311 (2%)
Query: 1 MTETVLKVENLKKYFPIR-GLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRT 59
+ + +L+ +LKK++P++ G+F VKA+DGVSF ++RG+T +VGESGCGK+T GR
Sbjct: 8 LQQPLLQAIDLKKHYPVKKGMFAPERLVKALDGVSFNLERGKTLAVVGESGCGKSTLGRL 67
Query: 60 ILRLIEPTDGKIIFMGKDVTKLKGEELKWFRRKAQIMFQDPYSSLDPRQTVFQIIMEPVK 119
+ + PT G++ + G+D+ K + K R+K QI+FQ+PY SL+PR+ V QI+ EP+
Sbjct: 68 LTMIEMPTGGELYYQGQDLLKHDPQAQKLRRQKIQIVFQNPYGSLNPRKKVGQILEEPLL 127
Query: 120 FH-GIQVDDPEEFVIRLLESVGLNEMHLYRYPHEFSGGQRQRIALARLLALKPEFIVLDE 178
+ + + E + ++ VGL H RYPH FSGGQRQRIA+AR L L P+ ++ DE
Sbjct: 128 INTSLSKEQRREKALSMMAKVGLKTEHYDRYPHMFSGGQRQRIAIARGLMLDPDVVIADE 187
Query: 179 PTSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVGPAD 238
P SALDVSV+A +LN + +LQ++ G +Y+FISHDL VV++++D + VMYLG+ VE G D
Sbjct: 188 PVSALDVSVRAQVLNLMMDLQQELGLSYVFISHDLSVVEHIADEVMVMYLGRCVEKGTKD 247
Query: 239 RIFENPLHPYTQMLFSAIPIPDPDLAREMKKKRMKVTGEPPSPINPPKGCRFHPRCPYAK 298
+IF NP HPYTQ L SA P +PD RE R+K++GE PSP+NPP GC F+ RC +
Sbjct: 248 QIFNNPRHPYTQALLSATPRLNPDDRRE----RIKLSGELPSPLNPPPGCAFNARC-RRR 302
Query: 299 AGLCDKEEPPM 309
G C + +P +
Sbjct: 303 FGPCTQLQPQL 313
>sp|P77737|OPPF_ECOLI OLIGOPEPTIDE TRANSPORT ATP-BINDING PROTEIN OPPF
>gi|7442535|pir||B64872 oligopeptide transport
ATP-binding protein oppF - Escherichia coli
>gi|1742036|dbj|BAA14779.1| (D90763) Oligopeptide
transport ATP-binding protein OppF. [Escherichia coli]
>gi|1787500|gb|AAC74329.1| (AE000223) homolog of
Salmonella ATP-binding protein of oligopeptide ABC
transport system [Escherichia coli K12]
Length = 334
Score = 289 bits (731), Expect = 4e-77
Identities = 152/324 (46%), Positives = 216/324 (65%), Gaps = 10/324 (3%)
Query: 3 ETVLKVENLKKYFPIRG----LFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGR 58
+ +L++ +LK +F I+ ++ +KAVDGV+ + GET G+VGESGCGK+T R
Sbjct: 9 KVLLEIADLKVHFEIKDGKQWFWQPPKTLKAVDGVTLRLYEGETLGVVGESGCGKSTFAR 68
Query: 59 TILRLIEPTDGKIIFMGKDVTKLKGEELKWFRRKAQIMFQDPYSSLDPRQTVFQIIMEPV 118
I+ L++ TDG + ++GK++ +K +E + R Q++FQDP +SL+PR T+ +II EP+
Sbjct: 69 AIIGLVKATDGHVAWLGKELLGMKPDEWRAVRSDIQMIFQDPLASLNPRMTIGEIIAEPL 128
Query: 119 KFHGIQVDDPE--EFVIRLLESVGLNEMHLYRYPHEFSGGQRQRIALARLLALKPEFIVL 176
+ + ++ E E V ++ VGL + RYPHEFSGGQ QRI +AR L L+P+ I+
Sbjct: 129 RTYHPKMSRQEVRERVKAMMLKVGLLPNLINRYPHEFSGGQCQRIGIARALILEPKLIIC 188
Query: 177 DEPTSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVGP 236
DEP SALDVS+QA ++N L++LQ + G + +FI+HDL VVK++SDR+ VMYLG VE+G
Sbjct: 189 DEPVSALDVSIQAQVVNLLQQLQREMGLSLIFIAHDLAVVKHISDRVLVMYLGHAVELGT 248
Query: 237 ADRIFENPLHPYTQMLFSAIPIPDPDLAREMKKKRMKVTGEPPSPINPPKGCRFHPRCPY 296
D ++ NPLHPYT+ L SA+PIPDPDL E K + GE PSPINPP GC F RCP
Sbjct: 249 YDEVYHNPLHPYTRALMSAVPIPDPDL--EKNKTIQLLEGELPSPINPPSGCVFRTRCPI 306
Query: 297 AKAGLCDKEEPPMVEVEKDHYVAC 320
A C K P++E H V+C
Sbjct: 307 A-GPECAKTR-PVLEGSFRHSVSC 328
>pir||F82242 oligopeptide ABC transporter, ATP-binding protein VC1095 [imported]
- Vibrio cholerae (group O1 strain N16961)
>gi|9655564|gb|AAF94254.1| (AE004190) oligopeptide ABC
transporter, ATP-binding protein [Vibrio cholerae]
Length = 336
Score = 287 bits (726), Expect = 2e-76
Identities = 146/302 (48%), Positives = 212/302 (69%), Gaps = 7/302 (2%)
Query: 27 VKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTILRLIEPTDGKIIFMGKDVTKLKGEEL 86
+KAVDGV+ + GET G+VGESGCGK+T R I+ L++ T G+++++G+D+T+++ +
Sbjct: 40 LKAVDGVNVRLYEGETLGVVGESGCGKSTFARAIIGLVQATHGEVVWLGQDLTRMQEVKR 99
Query: 87 KWFRRKAQIMFQDPYSSLDPRQTVFQIIMEPVK--FHGIQVDDPEEFVIRLLESVGLNEM 144
+ R++ Q++FQDP +SL+PR TV II EP++ + + + ++ V ++ VGL
Sbjct: 100 RATRKQIQMIFQDPLASLNPRMTVGDIIAEPLQTFYPELSKQEVKDRVKEMMAKVGLLPN 159
Query: 145 HLYRYPHEFSGGQRQRIALARLLALKPEFIVLDEPTSALDVSVQANILNTLKELQEKHGF 204
+ RYPHEFSGGQ QRI +AR L LKP+ I+ DEP SALDVS+QA ++N LKELQ++ G
Sbjct: 160 VINRYPHEFSGGQCQRIGIARALILKPKMIICDEPVSALDVSIQAQVVNLLKELQKELGL 219
Query: 205 TYLFISHDLGVVKYMSDRIGVMYLGKLVEVGPADRIFENPLHPYTQMLFSAIPIPDPDLA 264
+ +FI+HDL VVK++SDR+ VMYLG VE+G + +F NP HPYT+ L SA+PIPDP++
Sbjct: 220 SLVFIAHDLSVVKHISDRVLVMYLGNAVELGVSKELFANPKHPYTKALMSAVPIPDPNI- 278
Query: 265 REMKKKRMKVTGEPPSPINPPKGCRFHPRCPYAKAGLCDKEEPPMVEVEKDHYVACWLYA 324
E K + G+ PSP+NPP GC F RCP A A C K + P+++ H V+C LYA
Sbjct: 279 -ERNKTIQMLEGDLPSPMNPPSGCVFRTRCPQATAE-CAKTK-PVIKGSDIHSVSC-LYA 334
Query: 325 KA 326
+A
Sbjct: 335 EA 336
>gb|AAF73094.1|AF103793_5 (AF103793) ATPase OppF [Listeria monocytogenes]
Length = 325
Score = 284 bits (718), Expect = 1e-75
Identities = 160/325 (49%), Positives = 212/325 (65%), Gaps = 34/325 (10%)
Query: 3 ETVLKVENLKKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTILR 62
E +L++ NLK+YF +G T V+AVD +SF+I +GET GLVGESGCGK+TTGRTI+R
Sbjct: 6 EKLLEIHNLKQYFN-KG---TASEVRAVDDISFDIYKGETLGLVGESGCGKSTTGRTIIR 61
Query: 63 LIEPTDGKIIFMGKDVTKLKG-EELKWFRRKAQIMFQDPYSSLDPRQTVFQIIMEPVKFH 121
L + T G++I+ GKDV K +E+ FRRK Q++FQDPY+SL+PR V II E ++ H
Sbjct: 62 LYDATGGEVIYNGKDVHARKSRKEMLEFRRKMQMIFQDPYASLNPRVKVKDIIAEGIRIH 121
Query: 122 GIQVDDPEEF---VIRLLESVGLNEMHLYRYPHEFSGGQRQRIALARLLALKPEFIVLDE 178
G+ PEE V LLE+VGL++ H RYPHEFSGGQRQRI PEFI+ DE
Sbjct: 122 GL-AKTPEETNKQVYDLLETVGLSKEHAGRYPHEFSGGQRQRIGYRSCACCSPEFIIADE 180
Query: 179 PTSALD---VSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVG 235
P SALD VS+QA ++N L++LQ++ TYLFI+HDL +VKY+SDRIGVMY GKLV++
Sbjct: 181 PISALDFLDVSIQAQVVNLLRQLQKEKNLTYLFIAHDLSMVKYISDRIGVMYFGKLVKLA 240
Query: 236 PADRIFENPLHPYTQMLFSAIPIPDPDLAREMKKKRMKVTGEPPSPINPPKGCRFHPRCP 295
A+ ++ PLHPYT+ L SAIP+PDP+ R R++ T +P S
Sbjct: 241 FANDLYHAPLHPYTESLLSAIPLPDPNYER----TRVRKTYDPTS--------------- 281
Query: 296 YAKAGLCDKEEPPMVEVEKDHYVAC 320
D +E M E+ H+V C
Sbjct: 282 ---HNYKDGDEIKMREIAPGHFVYC 303
>dbj|BAB07358.1| (AP001519) oligopeptide ABC transporter (ATP-binding protein)
[Bacillus halodurans]
Length = 308
Score = 283 bits (717), Expect = 2e-75
Identities = 145/275 (52%), Positives = 199/275 (71%), Gaps = 3/275 (1%)
Query: 6 LKVENLKKYFPIRG--LFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTILRL 63
LKVE+LK +FPI+G + T+G+ KAVDGVS E++ G+T+GLVGESG GKTTTGR I+ L
Sbjct: 4 LKVEDLKVHFPIKGGVIPHTVGYNKAVDGVSLELEEGQTYGLVGESGSGKTTTGRAIIGL 63
Query: 64 IEPTDGKIIFMGKDVTKLKGEELKWFRRKAQIMFQDPYSSLDPRQTVFQIIMEPVK-FHG 122
+ T G I+F G+D+TK ++ RR Q++FQDPYSSL+P++ V II EP++ F
Sbjct: 64 NKLTAGHILFDGQDITKQLKKKKNDIRRNIQMIFQDPYSSLNPKKRVLDIIAEPLRNFEK 123
Query: 123 IQVDDPEEFVIRLLESVGLNEMHLYRYPHEFSGGQRQRIALARLLALKPEFIVLDEPTSA 182
+ + + V LLE VGL+ +++YPHEFSGGQRQRI +AR +ALKP+ I+ DEP SA
Sbjct: 124 LSKLEERKRVEELLEIVGLSRESIFKYPHEFSGGQRQRIGIARAIALKPKLIIADEPVSA 183
Query: 183 LDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVGPADRIFE 242
LDVSVQA +LN +K++Q++ TYLFISHDLG++++M DRIG+MY G+LVE G D I+E
Sbjct: 184 LDVSVQAQVLNFMKDIQKEFNLTYLFISHDLGIIRHMCDRIGIMYRGRLVEEGVRDDIYE 243
Query: 243 NPLHPYTQMLFSAIPIPDPDLAREMKKKRMKVTGE 277
+P H YT+ L +AIP DP + + R +V E
Sbjct: 244 SPQHIYTKRLIAAIPDMDPKNRDKHTQLRAEVKEE 278
>gb|AAK42735.1| Dipeptide ABC transporter ATP binding protein (dppF-3) [Sulfolobus
solfataricus]
Length = 323
Score = 282 bits (715), Expect = 3e-75
Identities = 152/333 (45%), Positives = 220/333 (65%), Gaps = 29/333 (8%)
Query: 1 MTETVL-KVENLKKYFPI--RGLFRTIG-----WVKAVDGVSFEIKRGETFGLVGESGCG 52
M++++L K N+ KY+ RG+ ++ +V+A+D VS EI++GE G+VGESG G
Sbjct: 1 MSDSILYKAININKYYLAKKRGILESLAREPPIYVRALDNVSVEIRKGEVLGVVGESGSG 60
Query: 53 KTTTGRTILRLIEPTDGKIIFMGKDVTKLKGEELKWFRRKAQIMFQDPYSSLDPRQTVFQ 112
KTT G+ + L +PT G +IFMG +V + R+ ++FQ+P +S++PR V
Sbjct: 61 KTTLGKVLATLEKPTGGNLIFMGMEVND---RNINHVRKHIHMVFQNPMTSINPRMKVKD 117
Query: 113 IIMEPVKFHGIQVDDPEEFVIRLLESVGLNEMHLY-RYPHEFSGGQRQRIALARLLALKP 171
I+ E +K + EE V +LLE VGL+ ++ +YP E SGGQ QR+A+AR LA +P
Sbjct: 118 IVREAMK------EKREERVKKLLEEVGLDYNYVKDKYPRELSGGQTQRVAIARALAKEP 171
Query: 172 EFIVLDEPTSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKL 231
+F++LDEPTSALD SVQA ILN L +LQ++ TYLFI+H++ V +Y+SDR+ +MY GK+
Sbjct: 172 DFLILDEPTSALDASVQAQILNLLVDLQKERKLTYLFITHNIAVARYISDRVIIMYAGKI 231
Query: 232 VEVGPADRIFENPLHPYTQMLFSAIPIPDPDLAREMKKKRMK-VTGEPPSPINPPKGCRF 290
VE G + P+HPYTQ L S++P E+ KK +K +GE PS INPP GCRF
Sbjct: 232 VEEGNTKEVISEPMHPYTQSLLSSVP--------ELGKKELKPPSGEVPSLINPPSGCRF 283
Query: 291 HPRCPYAKAGLCDKEEPPMVEVEKDHYVACWLY 323
+PRCP+A + +C ++EPP+VE+ VACWLY
Sbjct: 284 NPRCPFAMS-VCKEKEPPLVEI-NGRKVACWLY 314
>pir||F70141 probable oligopeptide transport ATP-binding protein oppF - Lyme
disease spirochete >gi|2281463|gb|AAC46288.1| (AF000366)
oligopeptide permease homolog F [Borrelia burgdorferi]
>gi|2688242|gb|AAC66721.1| (AE001140) oligopeptide ABC
transporter, ATP-binding protein (oppF) [Borrelia
burgdorferi]
Length = 323
Score = 280 bits (709), Expect = 1e-74
Identities = 155/332 (46%), Positives = 217/332 (64%), Gaps = 30/332 (9%)
Query: 3 ETVLKVENLKKYFPIRGLFRTIGW-----VKAVDGVSFEIKRGETFGLVGESGCGKTTTG 57
E +LKVENL + F F + W V AV+ VSFE+++ +T GLVGESGCGK+TT
Sbjct: 6 EIILKVENLMQTFTTGEDF--LFWKNKQKVNAVNNVSFEVEKNKTLGLVGESGCGKSTTL 63
Query: 58 RTILRLIEPTDGKIIFMGKDVTKLKGEELKWFRRKAQIMFQDPYSSLDPRQTVFQIIMEP 117
R+I++L PT G I F GK++TKL +EL ++ Q++FQDP++SLDPR T+ +II EP
Sbjct: 64 RSIMQLYTPTSGNIYFNGKNITKLSKKELLKTKKDMQMVFQDPHTSLDPRMTIKEIIAEP 123
Query: 118 VKFHGIQVDDP------EEFVIRLLESVGLNEMHLYRYPHEFSGGQRQRIALARLLALKP 171
++ + P E+ V L + VGL++ L RYPHEFSGGQRQRI +AR LAL P
Sbjct: 124 LEIYNENKILPKTKQEIEQRVNELTDIVGLHKSMLTRYPHEFSGGQRQRIGIARALALNP 183
Query: 172 EFIVLDEPTSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKL 231
+ ++LDE SALDVS++A ILN LK LQ++ +YLFISHDL VVKYMSD+I VMYLG +
Sbjct: 184 KLLLLDEAVSALDVSIRAQILNLLKALQKEFNLSYLFISHDLAVVKYMSDKIAVMYLGVI 243
Query: 232 VEVGPADRIFENPLHPYTQMLFSAIPIPDPDLAREMKKKRMKVTGEPPSPINPPKGCRFH 291
+E+ P + +F NP+HPYT+ML ++IP +P+ + K K +K+ + + I
Sbjct: 244 LELAPRETLFSNPIHPYTKMLIASIPEINPE---KRKNKNIKLDEQTLANIR-------- 292
Query: 292 PRCPYAKAGLCDKEEPPMVEVEKDHYVACWLY 323
K L + P + EVEKDH+V+ +L+
Sbjct: 293 ------KIHLSTQVHPKLEEVEKDHFVSKYLF 318
>sp|P45051|OPPF_HAEIN OLIGOPEPTIDE TRANSPORT ATP-BINDING PROTEIN OPPF
>gi|1075085|pir||B64184 oligopeptide transport
ATP-binding protein oppF - Haemophilus influenzae
(strain Rd KW20) >gi|1574675|gb|AAC22774.1| (U32792)
oligopeptide ABC transporter, ATP-binding protein (oppF)
[Haemophilus influenzae Rd]
Length = 332
Score = 279 bits (707), Expect = 3e-74
Identities = 146/324 (45%), Positives = 209/324 (64%), Gaps = 9/324 (2%)
Query: 3 ETVLKVENLKKYFPIRG----LFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGR 58
E +L+V +L F I+ F +KAV VSF++ GET G+VGESGCGK+T R
Sbjct: 8 ELLLEVNHLGVSFKIKNDKSLFFAKPQTLKAVKDVSFKLYAGETLGVVGESGCGKSTLAR 67
Query: 59 TILRLIEPTDGKIIFMGKDVTKLKGEELKWFRRKAQIMFQDPYSSLDPRQTVFQIIMEPV 118
I+ L+E ++G+I+++GK + K ++ K R+ Q++FQDP +SL+PR + +II EP+
Sbjct: 68 AIIGLVEASEGEILWLGKHLRKQSAKQWKETRKDIQMIFQDPLASLNPRMNIGEIIAEPL 127
Query: 119 KFHG--IQVDDPEEFVIRLLESVGLNEMHLYRYPHEFSGGQRQRIALARLLALKPEFIVL 176
K + + + +E V ++ VGL + RYPHEFSGGQ QRI +AR L ++P+ I+
Sbjct: 128 KIYQPHLSAAEVKEKVQAMMLKVGLLPNLINRYPHEFSGGQCQRIGIARALIIEPKMIIC 187
Query: 177 DEPTSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVGP 236
DEP SALDVS+QA ++N LK LQ++ G + +FI+HDL VVK++SDR+ VMYLG +E+G
Sbjct: 188 DEPVSALDVSIQAQVVNLLKSLQKEMGLSLIFIAHDLAVVKHISDRVLVMYLGNAMELGS 247
Query: 237 ADRIFENPLHPYTQMLFSAIPIPDPDLAREMKKKRMKVTGEPPSPINPPKGCRFHPRCPY 296
++ + HPYT+ L SA+PIPDP L E K + G+ PSPINPP GC F RC
Sbjct: 248 DVEVYNDTKHPYTKALMSAVPIPDPKL--ERNKSIELLEGDLPSPINPPSGCVFRTRCLK 305
Query: 297 AKAGLCDKEEPPMVEVEKDHYVAC 320
A C K++PP H+VAC
Sbjct: 306 ADEN-CAKQKPPFTSQNNSHFVAC 328
>dbj|BAA94703.1| (AB026907) dipeptide transporter DppE homolog [Ochrobactrum
anthropi]
Length = 335
Score = 278 bits (704), Expect = 6e-74
Identities = 153/296 (51%), Positives = 197/296 (65%), Gaps = 14/296 (4%)
Query: 27 VKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTILRLIEPTDGKIIFMGKDVTKLKGEEL 86
V+AVDGVS ++ GET GLVGESG GK+T GR IL L EP G I F G+ +
Sbjct: 34 VRAVDGVSLSVQAGETLGLVGESGSGKSTIGRAILGLNEPLSGTIHFDGRPTHSRRD--- 90
Query: 87 KWFRRKAQIMFQDPYSSLDPRQTVFQIIMEPVKFHGI-QVDDPEEFVIRLLESVGLNEMH 145
RR+ Q++FQDPYSSL+PR + I E ++FH I D + V RLL VGL+
Sbjct: 91 --LRRRMQMVFQDPYSSLNPRLKIGDAIGEVLRFHSIVPKQDVDREVRRLLSLVGLSAAM 148
Query: 146 LYRYPHEFSGGQRQRIALARLLALKPEFIVLDEPTSALDVSVQANILNTLKELQEKHGFT 205
R P E SGGQRQR +AR LAL+P+F+VLDEP +ALDVS+QA ILN L +L+++ G T
Sbjct: 149 AERRPREMSGGQRQRAGIARALALRPDFLVLDEPVAALDVSIQAQILNLLTDLRQELGLT 208
Query: 206 YLFISHDLGVVKYMSDRIGVMYLGKLVEVGPADRIFENPLHPYTQMLFSAIPIPDPDLAR 265
LFI+H LGVV++MSDRI V+YLGK++EVGPA +FE+ HPYT+ L SA+P
Sbjct: 209 MLFIAHGLGVVRHMSDRIAVLYLGKIMEVGPAHAVFESSRHPYTKALLSAVP-----EIN 263
Query: 266 EMKKKRMKVT-GEPPSPINPPKGCRFHPRCPYAKAGLCDKEEPPMVEVEKDHYVAC 320
+K++R VT G+ PSP+N P GCRF RCP A+ +C K +PP V V DH+ C
Sbjct: 264 LVKRQRPPVTQGDVPSPLNVPSGCRFRTRCPVAQ-DIC-KTQPPEVPVGPDHFSRC 317
>sp|P75796|YLIA_ECOLI HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PROTEIN YLIA
Length = 629
Score = 271 bits (685), Expect = 1e-71
Identities = 143/284 (50%), Positives = 191/284 (66%), Gaps = 6/284 (2%)
Query: 3 ETVLKVENLKKYFPIRG--LFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTI 60
E VL+V NL FP+R L R V AV+ VSF++ GET LVGESG GK+TTGR +
Sbjct: 317 EPVLRVRNLVTRFPLRSGLLNRVTREVHAVEKVSFDLWPGETLSLVGESGSGKSTTGRAL 376
Query: 61 LRLIEPTDGKIIFMGKDVTKLKGEELKWFRRKAQIMFQDPYSSLDPRQTVFQIIMEPVKF 120
LRL+E G+IIF G+ + L +L+ RR Q +FQDPY+SLDPRQT+ I+EP++
Sbjct: 377 LRLVESQGGEIIFNGQRIDTLSPGKLQALRRDIQFIFQDPYASLDPRQTIGDSIIEPLRV 436
Query: 121 HGIQVD-DPEEFVIRLLESVGLNEMHLYRYPHEFSGGQRQRIALARLLALKPEFIVLDEP 179
HG+ D V LLE VGL H +RYPHEFSGGQRQRI +AR LAL P+ I+ DE
Sbjct: 437 HGLLPGKDAAARVAWLLERVGLLPEHAWRYPHEFSGGQRQRICIARALALNPKVIIADEA 496
Query: 180 TSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVGPADR 239
SALDVS++ I+N L +LQ G YLFISHD+ VV+ +S R+ VMYLG++VE+GP
Sbjct: 497 VSALDVSIRGQIINLLLDLQRDFGIAYLFISHDMAVVERISHRVAVMYLGQIVEIGPRRA 556
Query: 240 IFENPLHPYTQMLFSAIPIPDPDLAREMKKKRMKVTGEPPSPIN 283
+FENP HPYT+ L +A+P+ +P + +R+ ++ + PS I+
Sbjct: 557 VFENPQHPYTRKLLAAVPVAEPS---RQRPQRVLLSDDLPSNIH 597
Score = 174 bits (436), Expect = 2e-42
Identities = 108/297 (36%), Positives = 168/297 (56%), Gaps = 23/297 (7%)
Query: 5 VLKVENLKKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTILRLI 64
VL VENL F + + AV +SF ++RGET +VGESG GK+ T ++RL+
Sbjct: 18 VLAVENLNIAF-----MQDQQKIAAVRNLSFSLQRGETLAIVGESGSGKSVTALALMRLL 72
Query: 65 EPTDG-----KIIFM--GKDVTKLKGEELKWFRR----KAQIMFQDPYSSLDPRQTVFQI 113
E G K++ ++V +L + R ++FQ+P +SL+P TV +
Sbjct: 73 EQAGGLVQCDKMLLQRRSREVIELSEQNAAQMRHVRGADMAMIFQEPMTSLNPVFTVGEQ 132
Query: 114 IMEPVKFHGIQVDDPEEFVI---RLLESVGLNEMH--LYRYPHEFSGGQRQRIALARLLA 168
I E ++ H Q EE ++ R+L+ V + E L RYPH+ SGG RQR+ +A L+
Sbjct: 133 IAESIRLH--QNASREEAMVEAKRMLDQVRIPEAQTILSRYPHQLSGGMRQRVMIAMALS 190
Query: 169 LKPEFIVLDEPTSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYL 228
+P ++ DEPT+ALDV++QA IL +K LQ++ +FI+HD+GVV ++DR+ VMY
Sbjct: 191 CRPAVLIADEPTTALDVTIQAQILQLIKVLQKEMSMGVIFITHDMGVVAEIADRVLVMYQ 250
Query: 229 GKLVEVGPADRIFENPLHPYTQMLFSAIPIPDPDLAREMKKKRMKVTGEPPSPINPP 285
G+ VE G ++IF P HPYT+ L +A+P + ++ ++ E P+ PP
Sbjct: 251 GEAVETGTVEQIFHAPQHPYTRALLAAVPQLGAMKGLDYPRRFPLISLEHPAKQAPP 307
>pir||E64820 probable oligopeptide transport protein - Escherichia coli
>gi|1787051|gb|AAC73916.1| (AE000185) putative
ATP-binding component of a transport system [Escherichia
coli K12]
Length = 612
Score = 271 bits (685), Expect = 1e-71
Identities = 143/284 (50%), Positives = 191/284 (66%), Gaps = 6/284 (2%)
Query: 3 ETVLKVENLKKYFPIRG--LFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTI 60
E VL+V NL FP+R L R V AV+ VSF++ GET LVGESG GK+TTGR +
Sbjct: 300 EPVLRVRNLVTRFPLRSGLLNRVTREVHAVEKVSFDLWPGETLSLVGESGSGKSTTGRAL 359
Query: 61 LRLIEPTDGKIIFMGKDVTKLKGEELKWFRRKAQIMFQDPYSSLDPRQTVFQIIMEPVKF 120
LRL+E G+IIF G+ + L +L+ RR Q +FQDPY+SLDPRQT+ I+EP++
Sbjct: 360 LRLVESQGGEIIFNGQRIDTLSPGKLQALRRDIQFIFQDPYASLDPRQTIGDSIIEPLRV 419
Query: 121 HGIQVD-DPEEFVIRLLESVGLNEMHLYRYPHEFSGGQRQRIALARLLALKPEFIVLDEP 179
HG+ D V LLE VGL H +RYPHEFSGGQRQRI +AR LAL P+ I+ DE
Sbjct: 420 HGLLPGKDAAARVAWLLERVGLLPEHAWRYPHEFSGGQRQRICIARALALNPKVIIADEA 479
Query: 180 TSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVGPADR 239
SALDVS++ I+N L +LQ G YLFISHD+ VV+ +S R+ VMYLG++VE+GP
Sbjct: 480 VSALDVSIRGQIINLLLDLQRDFGIAYLFISHDMAVVERISHRVAVMYLGQIVEIGPRRA 539
Query: 240 IFENPLHPYTQMLFSAIPIPDPDLAREMKKKRMKVTGEPPSPIN 283
+FENP HPYT+ L +A+P+ +P + +R+ ++ + PS I+
Sbjct: 540 VFENPQHPYTRKLLAAVPVAEPS---RQRPQRVLLSDDLPSNIH 580
Score = 173 bits (433), Expect = 3e-42
Identities = 101/275 (36%), Positives = 160/275 (57%), Gaps = 18/275 (6%)
Query: 27 VKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTILRLIEPTDG-----KIIFM--GKDVT 79
+ AV +SF ++RGET +VGESG GK+ T ++RL+E G K++ ++V
Sbjct: 18 IAAVRNLSFSLQRGETLAIVGESGSGKSVTALALMRLLEQAGGLVQCDKMLLQRRSREVI 77
Query: 80 KLKGEELKWFRR----KAQIMFQDPYSSLDPRQTVFQIIMEPVKFHGIQVDDPEEFVI-- 133
+L + R ++FQ+P +SL+P TV + I E ++ H Q EE ++
Sbjct: 78 ELSEQNAAQMRHVRGADMAMIFQEPMTSLNPVFTVGEQIAESIRLH--QNASREEAMVEA 135
Query: 134 -RLLESVGLNEMH--LYRYPHEFSGGQRQRIALARLLALKPEFIVLDEPTSALDVSVQAN 190
R+L+ V + E L RYPH+ SGG RQR+ +A L+ +P ++ DEPT+ALDV++QA
Sbjct: 136 KRMLDQVRIPEAQTILSRYPHQLSGGMRQRVMIAMALSCRPAVLIADEPTTALDVTIQAQ 195
Query: 191 ILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVGPADRIFENPLHPYTQ 250
IL +K LQ++ +FI+HD+GVV ++DR+ VMY G+ VE G ++IF P HPYT+
Sbjct: 196 ILQLIKVLQKEMSMGVIFITHDMGVVAEIADRVLVMYQGEAVETGTVEQIFHAPQHPYTR 255
Query: 251 MLFSAIPIPDPDLAREMKKKRMKVTGEPPSPINPP 285
L +A+P + ++ ++ E P+ PP
Sbjct: 256 ALLAAVPQLGAMKGLDYPRRFPLISLEHPAKQAPP 290
>dbj|BAA35517.1| (D90720) Hypothetical ABC transporter ATP-binding protein in bcr
5'region. [Escherichia coli] >gi|4062406|dbj|BAA35524.1|
(D90721) Hypothetical ABC transporter ATP-binding
protein in bcr 5'region. [Escherichia coli]
Length = 659
Score = 271 bits (685), Expect = 1e-71
Identities = 143/284 (50%), Positives = 191/284 (66%), Gaps = 6/284 (2%)
Query: 3 ETVLKVENLKKYFPIRG--LFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTI 60
E VL+V NL FP+R L R V AV+ VSF++ GET LVGESG GK+TTGR +
Sbjct: 347 EPVLRVRNLVTRFPLRSGLLNRVTREVHAVEKVSFDLWPGETLSLVGESGSGKSTTGRAL 406
Query: 61 LRLIEPTDGKIIFMGKDVTKLKGEELKWFRRKAQIMFQDPYSSLDPRQTVFQIIMEPVKF 120
LRL+E G+IIF G+ + L +L+ RR Q +FQDPY+SLDPRQT+ I+EP++
Sbjct: 407 LRLVESQGGEIIFNGQRIDTLSPGKLQALRRDIQFIFQDPYASLDPRQTIGDSIIEPLRV 466
Query: 121 HGIQVD-DPEEFVIRLLESVGLNEMHLYRYPHEFSGGQRQRIALARLLALKPEFIVLDEP 179
HG+ D V LLE VGL H +RYPHEFSGGQRQRI +AR LAL P+ I+ DE
Sbjct: 467 HGLLPGKDAAARVAWLLERVGLLPEHAWRYPHEFSGGQRQRICIARALALNPKVIIADEA 526
Query: 180 TSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVGPADR 239
SALDVS++ I+N L +LQ G YLFISHD+ VV+ +S R+ VMYLG++VE+GP
Sbjct: 527 VSALDVSIRGQIINLLLDLQRDFGIAYLFISHDMAVVERISHRVAVMYLGQIVEIGPRRA 586
Query: 240 IFENPLHPYTQMLFSAIPIPDPDLAREMKKKRMKVTGEPPSPIN 283
+FENP HPYT+ L +A+P+ +P + +R+ ++ + PS I+
Sbjct: 587 VFENPQHPYTRKLLAAVPVAEPS---RQRPQRVLLSDDLPSNIH 627
Score = 174 bits (436), Expect = 2e-42
Identities = 108/297 (36%), Positives = 168/297 (56%), Gaps = 23/297 (7%)
Query: 5 VLKVENLKKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTILRLI 64
VL VENL F + + AV +SF ++RGET +VGESG GK+ T ++RL+
Sbjct: 48 VLAVENLNIAF-----MQDQQKIAAVRNLSFSLQRGETLAIVGESGSGKSVTALALMRLL 102
Query: 65 EPTDG-----KIIFM--GKDVTKLKGEELKWFRR----KAQIMFQDPYSSLDPRQTVFQI 113
E G K++ ++V +L + R ++FQ+P +SL+P TV +
Sbjct: 103 EQAGGLVQCDKMLLQRRSREVIELSEQNAAQMRHVRGADMAMIFQEPMTSLNPVFTVGEQ 162
Query: 114 IMEPVKFHGIQVDDPEEFVI---RLLESVGLNEMH--LYRYPHEFSGGQRQRIALARLLA 168
I E ++ H Q EE ++ R+L+ V + E L RYPH+ SGG RQR+ +A L+
Sbjct: 163 IAESIRLH--QNASREEAMVEAKRMLDQVRIPEAQTILSRYPHQLSGGMRQRVMIAMALS 220
Query: 169 LKPEFIVLDEPTSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYL 228
+P ++ DEPT+ALDV++QA IL +K LQ++ +FI+HD+GVV ++DR+ VMY
Sbjct: 221 CRPAVLIADEPTTALDVTIQAQILQLIKVLQKEMSMGVIFITHDMGVVAEIADRVLVMYQ 280
Query: 229 GKLVEVGPADRIFENPLHPYTQMLFSAIPIPDPDLAREMKKKRMKVTGEPPSPINPP 285
G+ VE G ++IF P HPYT+ L +A+P + ++ ++ E P+ PP
Sbjct: 281 GEAVETGTVEQIFHAPQHPYTRALLAAVPQLGAMKGLDYPRRFPLISLEHPAKQAPP 337
>pir||F75202 dipeptide abc transporter, dipeptide-binding protein PAB0094 -
Pyrococcus abyssi (strain Orsay)
>gi|5457578|emb|CAB49069.1| (AJ248283) dipeptide ABC
transporter, dipeptide-binding protein [Pyrococcus
abyssi]
Length = 323
Score = 268 bits (678), Expect = 6e-71
Identities = 144/328 (43%), Positives = 211/328 (63%), Gaps = 18/328 (5%)
Query: 3 ETVLKVENLKKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTILR 62
E ++K+ENL F G VKA+DGVSF+I++GE L+GE+GCGK+ T + I+R
Sbjct: 4 EPLVKIENLYIDF-----ITDRGVVKAIDGVSFDIRKGEILALIGETGCGKSVTAKAIMR 58
Query: 63 LIEPT---DGKIIFMGKDVTKLKGEELKWFRRKAQIM-FQDPYSSLDPRQTVFQIIMEPV 118
L+ GKII+ G+++ +L E++ R K M FQDP +SL+P T+ + E
Sbjct: 59 LLPRNAIVKGKIIYKGRNLLELPEREMRKIRGKEIAMIFQDPLTSLNPVFTIEDQMGEMF 118
Query: 119 KFHGIQV-DDPEEFVIRLLESVGLN--EMHLYRYPHEFSGGQRQRIALARLLALKPEFIV 175
K H + V + +++LL+ V + E + YP E SGG RQR+ +A +L+ KP ++
Sbjct: 119 KVHKLPVVGSILDEIVKLLKMVKIPDPEKRVKSYPFELSGGMRQRVMIAMMLSAKPSLLI 178
Query: 176 LDEPTSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVG 235
DEPT+ALDV++QA I+N + EL+EK + L I+H+ GVV M+DR+ VMY G++VE+
Sbjct: 179 ADEPTTALDVTIQAQIMNLMLELREKFETSILLITHNPGVVAEMADRVVVMYAGQVVEIA 238
Query: 236 PADRIFENPLHPYTQMLFSAIPIPDPDLAREMKKKRMKVTGEPPSPINPPKGCRFHPRCP 295
P + IF+NPLHPYTQ L A+P + +++ + G P+ +NPPKGCRFHPRC
Sbjct: 239 PVEEIFDNPLHPYTQGLLRALP-----RGHKTERELENIPGRVPNLLNPPKGCRFHPRCK 293
Query: 296 YAKAGLCDKEEPPMVEVEKDHYVACWLY 323
AK +C KE+P ++EVEK+HYVAC LY
Sbjct: 294 KAKE-MCSKEKPKLIEVEKEHYVACHLY 320
>pir||D72371 oligopeptide ABC transporter, ATP-binding protein - Thermotoga
maritima (strain MSB8)
>gi|4981012|gb|AAD35586.1|AE001726_20 (AE001726)
oligopeptide ABC transporter, ATP-binding protein
[Thermotoga maritima]
Length = 327
Score = 266 bits (672), Expect = 3e-70
Identities = 141/327 (43%), Positives = 204/327 (62%), Gaps = 20/327 (6%)
Query: 8 VENLKKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTILRLIEPT 67
+ENLK YF + G VKAVDGVSFE++ GET G+VGESG GK+ T +I+RL++
Sbjct: 1 MENLKTYF-----YTEDGVVKAVDGVSFEVREGETLGIVGESGSGKSVTSLSIMRLLDQN 55
Query: 68 ----DGKIIFMGKDVTKLKGEELKWFRRKAQIM-FQDPYSSLDPRQTVFQIIMEPVKFH- 121
DGKIIF G+++ +L E++ R K M FQ+P +L+P T+ IME + H
Sbjct: 56 GKIVDGKIIFKGRNLLELSENEMRKIRGKEIAMIFQEPMVALNPVFTIGDQIMEAIILHQ 115
Query: 122 GIQVDDPEEFVIRLLESVGLNE--MHLYRYPHEFSGGQRQRIALARLLALKPEFIVLDEP 179
+ + + I LL VG+ E + YPH+ SGG RQR +A L+ +P ++ DEP
Sbjct: 116 NVSEKEARKMAIDLLRKVGIPEPEKRVDEYPHQLSGGMRQRAMIAMALSCRPSLLIADEP 175
Query: 180 TSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVGPADR 239
T+ALDV++QA IL +KELQ+++G + I+HD+GVV MSD++ VMY GK+VE G
Sbjct: 176 TTALDVTIQAQILELMKELQKEYGMAIILITHDMGVVAEMSDKVAVMYAGKVVEYGDVKT 235
Query: 240 IFENPLHPYTQMLFSAIPIPDPDLAREMKKKRMK-VTGEPPSPINPPKGCRFHPRCPYAK 298
IF P HPYT L +IP D ++++R+K + G P P+N P GC+FHPRC + +
Sbjct: 236 IFTEPKHPYTYALLESIPRID------VEQERLKSIPGNVPDPLNFPPGCKFHPRCEFFE 289
Query: 299 AGLCDKEEPPMVEVEKDHYVACWLYAK 325
G CD EEP + +++ +H V C+ + K
Sbjct: 290 KGKCDVEEPELEDLDGNHKVRCFFWQK 316
>emb|CAC11415.1| (AL445063) sporulation protein (spo0KD) related protein
[Thermoplasma acidophilum]
Length = 704
Score = 265 bits (671), Expect = 4e-70
Identities = 152/344 (44%), Positives = 216/344 (62%), Gaps = 33/344 (9%)
Query: 4 TVLKVENLKKYFPIR-----GLF-RTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTG 57
++++V++L KYF I+ LF R +V+AVD ++F I++GE G+VGESG GKTT G
Sbjct: 348 SMVEVKDLVKYFEIKESISKALFEREKRFVRAVDDITFAIRKGEILGIVGESGSGKTTLG 407
Query: 58 RTILRLIEPTDGKII--FMGKDV----TKLKGEELKW-FRRKAQIMFQDPYSSLDPRQTV 110
+T+L L PT GKI F DV T + E ++ R++ Q++FQDPY SL+P+ TV
Sbjct: 408 KTLLGLYSPTAGKITYSFSNGDVEITPTTSESELMRSSIRKETQMIFQDPYDSLNPKLTV 467
Query: 111 FQIIMEPV---KFH--GIQVDDPEEFVIRLLESVGLN---------EMHLYRYPHEFSGG 156
+ I+ EP+ ++H + DD + + +L V + E +L+RYPHE SGG
Sbjct: 468 YDIVAEPIIARRYHKGNKEKDDIYKNPLEILNLVKIALAKASLKPVENYLFRYPHELSGG 527
Query: 157 QRQRIALARLLALKPEFIVLDEPTSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVV 216
+RQR+A AR L L EFI+ DEPTS LDVS++A+ +N +KE++ K G T ++ISHD+
Sbjct: 528 ERQRVATARALVLNSEFIIADEPTSMLDVSIRASFMNMMKEIRSKEGITMVYISHDIAST 587
Query: 217 KYMSDRIGVMYLGKLVEVGPADRIFENPLHPYTQMLFSAIPIPDPDLAREMKKKRMKVTG 276
YMSD+I VMYLGK VE+G AD I PLHPYT+ L AIP P D ++ + G
Sbjct: 588 YYMSDKILVMYLGKAVEMGSADAIINEPLHPYTKALIKAIPTPFSD----WDPSKIDIIG 643
Query: 277 EPPSPINPPKGCRFHPRCPYAKAGLCDKEEPPMVEVEKDHYVAC 320
E + IN PKGCRF+ RC Y + +C K+ PP V+ +DH+ C
Sbjct: 644 EIGNAINVPKGCRFYNRCIY-RQDIC-KDNPPTVKGAEDHWYLC 685
Score = 189 bits (476), Expect = 3e-47
Identities = 116/319 (36%), Positives = 171/319 (53%), Gaps = 26/319 (8%)
Query: 25 GWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTILRLIEPTD---GKIIFMG------ 75
G V A+ VSF++K+G G+VGESG GK+T +I+ L+ G I G
Sbjct: 13 GIVHALSDVSFDLKQGRFLGIVGESGSGKSTLALSIMSLLPENAMMRGSIYLKGTEYISD 72
Query: 76 --------KDVTKLKGEELKWFRRK-AQIMFQDPYSSLDPRQTVFQIIMEPVKFHG-IQV 125
K K+ + L+ R K ++FQ +S +P T+ + + E K H +
Sbjct: 73 VIINNAKKKKARKILEDNLRNIRWKNISMVFQGAMNSFNPVYTIRRQMFEVFKIHTTLDN 132
Query: 126 DDPEEFVIRLLESVGLNEMHLYRYPHEFSGGQRQRIALARLLALKPEFIVLDEPTSALDV 185
D+ E+ V L GLN L YPHE SGG +QR +A L+L P+ ++ DEPT+ LDV
Sbjct: 133 DEIEKKVEEALRMAGLNISVLDMYPHELSGGMKQRAVIAMALSLDPDIVIADEPTTGLDV 192
Query: 186 SVQANILNTLKELQEKHGF-TYLFISHDLGVVKYMSDRIGVMYLGKLVEVGPADRIFENP 244
QA I++ LK+L+E + + ISHDLGVV ++D + V+Y GK+ E G RIF+N
Sbjct: 193 ITQAEIISQLKKLKENGKIKSLILISHDLGVVSQLADEVMVLYAGKVFEYGEKSRIFQNT 252
Query: 245 LHPYTQMLFSAIPIPDPDLAREMKKKRMKVTGEPPSPINPPKGCRFHPRCPYAKAGLCDK 304
+PYT L + P R K+ + G P P+ KGC+F RC Y +C +
Sbjct: 253 ANPYTYKLIGSYP-----SIRNAKRYVEGIPGSLPDPMKIGKGCKFADRC-YMARDVCRE 306
Query: 305 EEPPMVEVEKDHYVACWLY 323
EEP +++VE +HY AC+ +
Sbjct: 307 EEPELIKVEDNHYSACFYW 325
>pir||C72300 oligopeptide ABC transporter, ATP-binding protein - Thermotoga
maritima (strain MSB8)
>gi|4981605|gb|AAD36139.1|AE001766_5 (AE001766)
oligopeptide ABC transporter, ATP-binding protein
[Thermotoga maritima]
Length = 332
Score = 265 bits (671), Expect = 4e-70
Identities = 139/332 (41%), Positives = 209/332 (62%), Gaps = 22/332 (6%)
Query: 4 TVLKVENLKKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTILRL 63
T+L+++NL+ YF F G VKAVDGVSFEI+ G T G+VGESGCGK+ T R+I++L
Sbjct: 3 TLLQIKNLRTYF-----FTDEGVVKAVDGVSFEIEEGRTLGVVGESGCGKSVTARSIIKL 57
Query: 64 IEPT----DGKIIF----MGKDVTKLKGEELKWFR-RKAQIMFQDPYSSLDPRQTVFQII 114
+ G+I++ D+ K EE++ R R ++FQ+P ++ P T+ I
Sbjct: 58 LSTAGRIVSGEILYNMDGQMVDLVKFSKEEIRKVRGRHIAMIFQEPMAAFSPVYTIGDQI 117
Query: 115 MEPVKFH-GIQVDDPEEFVIRLLESVGLN--EMHLYRYPHEFSGGQRQRIALARLLALKP 171
E + +H GI + E + LL VG+ E + YP E+SGG RQR +A L+ P
Sbjct: 118 TEGMIYHFGITKQEARERAVELLRRVGIPKPEKMIDSYPFEYSGGMRQRAMIAMALSCNP 177
Query: 172 EFIVLDEPTSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKL 231
++ DEPT+ALDV++QA +L+ LK+LQ+++ + I+H++GVV M+D + VMYLG++
Sbjct: 178 RLLIADEPTTALDVTIQAQVLDLLKDLQQEYKMAIMMITHNMGVVAEMADHVVVMYLGRV 237
Query: 232 VEVGPADRIFENPLHPYTQMLFSAIPIPDPDLAREMKKKRMKVTGEPPSPINPPKGCRFH 291
VE P + +F NP HPYT +L +IP+ + + +++ + + G+ P P N PKGCRFH
Sbjct: 238 VESAPVEELFYNPKHPYTSLLLRSIPV----VGKRVERLEV-IEGDVPDPRNMPKGCRFH 292
Query: 292 PRCPYAKAGLCDKEEPPMVEVEKDHYVACWLY 323
PRCPY G+CD+ EP VEV +H V+C+LY
Sbjct: 293 PRCPYMMKGICDEREPVEVEVGPEHRVSCFLY 324
>gb|AAK41514.1| Oligo/dipeptide transport, ATP binding protein (dppF-1) [Sulfolobus
solfataricus]
Length = 325
Score = 264 bits (667), Expect = 1e-69
Identities = 140/323 (43%), Positives = 208/323 (64%), Gaps = 15/323 (4%)
Query: 5 VLKVENLKKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTILRLI 64
V+KVENLK YF G+F VKA+DGV+ IK E G+VGESG GKTT GR + L
Sbjct: 14 VVKVENLKVYFTKGGMFTKKYVVKALDGVTLSIKEREIMGVVGESGSGKTTLGRVTIGLQ 73
Query: 65 EPTDGKIIFMG--KDVTKLKGEELKWFRRKAQIMFQDPYSSLDPRQTVFQIIMEPVKFHG 122
+PT G + K++ K + LK Q+++QDPYSS+DP V+ ++ P+K+
Sbjct: 74 KPTSGNVYIKADNKEINVNKAK-LKDISNYVQMIYQDPYSSIDPIMRVYDVLATPLKYKK 132
Query: 123 IQ-VDDPEEFVIRLLE-SVGLNEMHLYRYPHEFSGGQRQRIALARLLALKPEFIVLDEPT 180
+ +D E +RL++ + L E +Y + SGGQRQR+++AR + + P++IV DEPT
Sbjct: 133 MSDIDKKIEEAMRLVDLPLELLENRVY----QLSGGQRQRLSIARAIVVNPKYIVADEPT 188
Query: 181 SALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVGPADRI 240
+ LD S++ IL +K+ +E GF++++I+H+L + K +SDRI V+YLGK+VE+G ++ I
Sbjct: 189 TMLDASLKGEILKIIKDARESKGFSFMYITHELPIAKIISDRIIVLYLGKIVELGNSNEI 248
Query: 241 FENPLHPYTQMLFSAIPIPDPDLAREMKKKRMKVTGEPPSPINPPKGCRFHPRCPYAKAG 300
+NPLHPYTQ L P DP L ++K+ ++KV + P KGC F+PRCP+A
Sbjct: 249 IKNPLHPYTQGLIEVYPRIDPSLRDKIKEIKIKV-----DIVRPDKGCVFYPRCPFAMP- 302
Query: 301 LCDKEEPPMVEVEKDHYVACWLY 323
C ++EP + EV ++HYVACWLY
Sbjct: 303 KCKEQEPELKEVSQNHYVACWLY 325
>pir||D75142 oligopeptide transport ATP-binding protein appf PAB0631 -
Pyrococcus abyssi (strain Orsay)
>gi|5458364|emb|CAB49853.1| (AJ248285) OLIGOPEPTIDE
TRANSPORT ATP-BINDING PROTEIN APPF [Pyrococcus abyssi]
Length = 322
Score = 262 bits (663), Expect = 4e-69
Identities = 148/324 (45%), Positives = 207/324 (63%), Gaps = 14/324 (4%)
Query: 5 VLKVENLKKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTILRLI 64
+L+V+NL K F GL V+AVDGVSF I GE LVGESG GKTT G+ ILRL+
Sbjct: 2 LLEVQNLTKIFT-SGLIGGYQ-VRAVDGVSFTINEGEIVSLVGESGSGKTTIGKLILRLL 59
Query: 65 EPTDGKIIFMGKDVTKLKGEELK-WFRRKAQIMFQDPYSSLDPRQTV---FQIIMEPVKF 120
PT G+I+F GKD+ K +ELK ++ RK Q +FQDP++S +P V F +I + F
Sbjct: 60 TPTSGRILFEGKDIMKFSKKELKTYYYRKVQAVFQDPFASFNPLHQVDKVFHMIFDSY-F 118
Query: 121 HGIQVDDPEEFVIRLLESVGLNEMHLY-RYPHEFSGGQRQRIALARLLALKPEFIVLDEP 179
+ ++ EE + + LE VGLN + +YPH+ SGGQ QRI +AR L LKP ++ DE
Sbjct: 119 PDLGREEREEMIDKALEEVGLNPSEVRGKYPHQLSGGQLQRILIARALLLKPRLLIADEA 178
Query: 180 TSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVGPADR 239
S LD S + ++LN L E ++K+G + LFI+HDL + Y+SD +MY G +VE+G ++
Sbjct: 179 VSMLDASTRIDVLNLLGEFRDKYGTSVLFITHDLALGYYISDSTIIMYRGTIVEMGETEK 238
Query: 240 IFENPLHPYTQMLFSAIPIPDPDLAREMKKKRMKVTGEPPSPINPPKGCRFHPRCPYAKA 299
+F NPLHPYT+ML ++ PDL + + K ++ E + KGCR+ PRCP AK
Sbjct: 239 VFHNPLHPYTKMLLESV----PDLNVKWEFKGIEPEKE-EGKVWKIKGCRYAPRCPKAK- 292
Query: 300 GLCDKEEPPMVEVEKDHYVACWLY 323
+C K P ++EVEK+H+VAC LY
Sbjct: 293 DVCFKIRPTLIEVEKNHWVACHLY 316
>pir||F71163 probable oligopeptide transport ATP-binding protein AppF -
Pyrococcus horikoshii >gi|3256912|dbj|BAA29595.1|
(AP000002) 321aa long hypothetical oligopeptide
transport ATP-binding protein AppF [Pyrococcus
horikoshii]
Length = 321
Score = 261 bits (660), Expect = 8e-69
Identities = 144/326 (44%), Positives = 210/326 (64%), Gaps = 14/326 (4%)
Query: 5 VLKVENLKKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTILRLI 64
VL++E++ K F GLF V+AVD VSFE+ GE L+GESG GKTT G+ ILRL+
Sbjct: 4 VLELEHVTKVFT-SGLFGGYE-VRAVDDVSFEVGEGEIVSLIGESGSGKTTIGKLILRLL 61
Query: 65 EPTDGKIIFMGKDVTKLKGEELK-WFRRKAQIMFQDPYSSLDPRQTV---FQIIMEPVKF 120
+PT G+I+F G+D+ E+L+ ++ + Q +FQDP++S +P V F ++
Sbjct: 62 KPTSGRILFRGEDIWSFDREKLRRYYYKNVQAVFQDPFASFNPLHKVDRVFDLVFRNF-L 120
Query: 121 HGIQVDDPEEFVIRLLESVGLNEMH-LYRYPHEFSGGQRQRIALARLLALKPEFIVLDEP 179
G+ + EE + R LESVGLN L +YPH+ SGGQ QRI +AR L ++P ++ DE
Sbjct: 121 RGVAPGEREELIKRSLESVGLNPGEVLGKYPHQLSGGQLQRILIARALLVEPSLLIADEA 180
Query: 180 TSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVGPADR 239
S LD S + +ILN L E ++K G + +FI+HDL + Y+SD+I +MY G++VE G A+R
Sbjct: 181 VSMLDASTRIDILNLLGEFRDKFGTSVIFITHDLALGYYISDKIVIMYRGRIVEWGDAER 240
Query: 240 IFENPLHPYTQMLFSAIPIPDPDLAREMKKKRMKVTGEPPSPINPPKGCRFHPRCPYAKA 299
+F NPLHPYT+ML ++ PDL+ + K ++ E + KGCRF PRCPYA+
Sbjct: 241 VFGNPLHPYTRMLLESV----PDLSVRWEFKGIEPERE-EERVYEIKGCRFAPRCPYARK 295
Query: 300 GLCDKEEPPMVEVEKDHYVACWLYAK 325
C ++ P +E+EK+H+VAC+LY K
Sbjct: 296 E-CYEKPPQTIEIEKNHHVACYLYLK 320
>pir||H72215 oligopeptide ABC transporter, ATP-binding protein - Thermotoga
maritima (strain MSB8)
>gi|4982327|gb|AAD36814.1|AE001813_6 (AE001813)
oligopeptide ABC transporter, ATP-binding protein
[Thermotoga maritima]
Length = 324
Score = 261 bits (660), Expect = 8e-69
Identities = 144/327 (44%), Positives = 205/327 (62%), Gaps = 21/327 (6%)
Query: 5 VLKVENLKKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTILRLI 64
+L V NLK F R G VKAVDG+S+++ +GE+ G+VGESG GK+ + ++LRLI
Sbjct: 4 LLNVNNLKVEF-----HRVEGIVKAVDGISYKLNKGESLGIVGESGSGKSVSVLSLLRLI 58
Query: 65 EPT----DGKIIFMGKDVTKLKGEELKWFRRK-AQIMFQDPYSSLDPRQTVFQIIMEPVK 119
DG+ IF+GKD+ KL EEL+ R K I+FQ+P +SL+P V +MEP+
Sbjct: 59 NRNGRIVDGEAIFLGKDLLKLNKEELRNIRGKDISIIFQNPMTSLNPIIRVGIQVMEPII 118
Query: 120 FHGIQV-DDPEEFVIRLLESVGLNEM--HLYRYPHEFSGGQRQRIALARLLALKPEFIVL 176
+H + ++ E I LLE VG+ E YP +FSGG RQR+ +A LA P+ ++
Sbjct: 119 WHRLMKNEEARERAIELLERVGIPESPKRFLNYPFQFSGGMRQRVMIAMALACHPKLLIA 178
Query: 177 DEPTSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVGP 236
DEPT+ALDV++QA I+ L+EL+E++G + +FI+HDL V DRI MY GK+VE P
Sbjct: 179 DEPTTALDVTIQAQIMELLQELKEEYGMSVIFITHDLSVATNFCDRIITMYAGKIVEEAP 238
Query: 237 ADRIFENPLHPYTQ-MLFSAIPIPDPDLAREMKKKRMKVTGEPPSPINPPKGCRFHPRCP 295
+ I + PLHPYT+ +L S + I KK + + G PP+P P GC+FHPRC
Sbjct: 239 VEEILKTPLHPYTKGLLNSTLEI------GSRGKKLVPIPGNPPNPTKHPSGCKFHPRCS 292
Query: 296 YAKAGLCDKEEPPMVEVEKDHYVACWL 322
+A +C +EEPP+V + ++H VAC L
Sbjct: 293 FAME-ICQREEPPLVNISENHRVACHL 318
>pir||E72536 probable oligopeptide transport ATP-binding protein APE1578 -
Aeropyrum pernix (strain K1) >gi|5105265|dbj|BAA80578.1|
(AP000062) 324aa long hypothetical oligopeptide
transport ATP-binding protein [Aeropyrum pernix]
Length = 324
Score = 260 bits (658), Expect = 1e-68
Identities = 146/331 (44%), Positives = 197/331 (59%), Gaps = 22/331 (6%)
Query: 1 MTETVLKVENLKKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTI 60
M + +L VE+LK YF + G VKAVDGVSF ++RGE G+ GESG GK+T +I
Sbjct: 1 MAQELLVVEDLKTYF-----YTLRGIVKAVDGVSFTLRRGEVLGIAGESGSGKSTLAWSI 55
Query: 61 LRLIEP----TDGKIIFMGKDVTKLKGEELK----WFRRKAQIMFQDPYSSLDPRQTVFQ 112
L L+ P G+I+ G DVT + EL+ W +K ++FQ + L P TV +
Sbjct: 56 LGLVPPPGRIVGGRIMIDGMDVTSMSEAELRRKVRW--KKVSMVFQGAMNVLTPVYTVGR 113
Query: 113 IIMEPVKFH-GIQVDDPEEFVIRLLESVGLNEMHLYRYPHEFSGGQRQRIALARLLALKP 171
I E ++ H G+ + + V LLESVGL+ RYPHE SGGQ+QR+ +A LAL+P
Sbjct: 114 QIEEVLQIHRGVGRHEARQRVYELLESVGLHRSIADRYPHELSGGQKQRVVIAMALALEP 173
Query: 172 EFIVLDEPTSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKL 231
+ ++ DEPT+ALDV VQA ILN LK+L + + + I+HDL V+ +++ + +MY GK+
Sbjct: 174 DIVIADEPTTALDVVVQAQILNLLKKLAWEKNLSIILITHDLSVIAELAETVMIMYGGKI 233
Query: 232 VEVGPADRIFENPLHPYTQMLFSAIPIPDPDLAREMKKKRMKVTGEPPSPINPPKGCRFH 291
E GP+D +F P HPYTQ L AIP R + + G PP NPP GCRFH
Sbjct: 234 AEYGPSDAVFTKPQHPYTQALLKAIP-----KLRGPIDRLAYIPGSPPDLRNPPPGCRFH 288
Query: 292 PRCPYAKAGLCDKEEPPMVEVEKDHYVACWL 322
PRCP A C +EEPP+ V H ACWL
Sbjct: 289 PRCPKA-FDRCSREEPPLFRVGDGHLSACWL 318
>pir||T45281 probable ABC transporter intracellular ATPase chain BldKE
[imported] - Streptomyces coelicolor (fragment)
>gi|1532205|gb|AAB09558.1| (U68036) putative ABC
transporter intracellular ATPase subunit BldKE
[Streptomyces coelicolor A3(2)]
Length = 284
Score = 259 bits (656), Expect = 2e-68
Identities = 128/237 (54%), Positives = 167/237 (70%), Gaps = 1/237 (0%)
Query: 27 VKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTILRLIEPTDGKIIFMGKDVTKLKGEEL 86
+KAVD V FE+ G GLVGESGCGK+TTGR + RL EPT G I + GKD+T+ EL
Sbjct: 41 LKAVDRVDFEVFPGRELGLVGESGCGKSTTGRQLTRLYEPTQGSIEYRGKDITRANRREL 100
Query: 87 KWFRRKAQIMFQDPYSSLDPRQTVFQIIMEPVKFHGIQVDDPEEFVIR-LLESVGLNEMH 145
R + Q++FQDPY+SL+PRQTV II P++ +GI E +R LLE VGLN H
Sbjct: 101 APVRSEIQMIFQDPYASLNPRQTVGTIISGPMEINGINPPGGREKRVRELLEIVGLNPEH 160
Query: 146 LYRYPHEFSGGQRQRIALARLLALKPEFIVLDEPTSALDVSVQANILNTLKELQEKHGFT 205
R+PHEFSGGQRQRI +AR +AL+P+ IV DEP SALDVS+QA ++N L+E+Q + G
Sbjct: 161 YNRFPHEFSGGQRQRIGVARAVALQPKLIVADEPVSALDVSIQAQVVNLLQEVQREMGIA 220
Query: 206 YLFISHDLGVVKYMSDRIGVMYLGKLVEVGPADRIFENPLHPYTQMLFSAIPIPDPD 262
++FI+HDL +V++ S R+ VMYLGK+VE+ D ++ P HPYT L SA+P D D
Sbjct: 221 FVFIAHDLAIVRHFSQRVAVMYLGKIVEIADRDSLYNRPRHPYTHALLSAVPETDLD 277
>pir||C72452 probable peptide transport ATP-binding protein APE2263 - Aeropyrum
pernix (strain K1) >gi|5105964|dbj|BAA81275.1|
(AP000064) 347aa long hypothetical peptide transport
ATP-binding protein [Aeropyrum pernix]
Length = 347
Score = 258 bits (653), Expect = 5e-68
Identities = 140/325 (43%), Positives = 200/325 (61%), Gaps = 16/325 (4%)
Query: 5 VLKVENLKKYFPI------RGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGR 58
++ + LK ++P+ R L R V+AVDGV I+ GE +VGESGCGKTT G+
Sbjct: 13 IVSIRGLKVHYPVYYSLLKRILGRPDAVVRAVDGVDLGIREGEVLAIVGESGCGKTTLGK 72
Query: 59 TILRLIEPTDGKIIFMGKDVTKLKGEELKWFRRKAQIMFQDPYSSLDPRQTVFQIIMEPV 118
I+ + EP+DG I + G+ +T + + RRK Q++FQDPY SLDP V + EP+
Sbjct: 73 AIVGIEEPSDGAIYYRGELLTPHRLARDRRLRRKLQMVFQDPYKSLDPLMPVGDQVAEPL 132
Query: 119 KFHGI-QVDDPEEFVIRLLESVGLN--EMHLYRYPHEFSGGQRQRIALARLLALKPEFIV 175
HG+ + ++ + +LE+VGL +R PH+ SGGQRQR+A+AR L L+PE IV
Sbjct: 133 VIHGLARGEEARRRAVEMLETVGLTPGREFYWRKPHQLSGGQRQRVAIARTLVLEPEVIV 192
Query: 176 LDEPTSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVG 235
DEP S +DVS++A+IL+ + + + G T + I+HD+ V + ++DRI VMYLGK+VEVG
Sbjct: 193 ADEPVSMIDVSMRASILDLIMDYHRRTGATIVLITHDIAVARAVADRIAVMYLGKIVEVG 252
Query: 236 PADRIFENPLHPYTQMLFSAIPIPDPDLAREMKKKRMKVTGEPPSPINPPKGCRFHPRCP 295
+ ENP HPYT +A+ P ++R + R ++GE PS + P GCRFHPRCP
Sbjct: 253 EPRSVIENPRHPYT----AALVTSTPSISRR-RPPRFPISGEVPSAVAIPPGCRFHPRCP 307
Query: 296 YAKAGLCDKEEPPMVEVEKDHYVAC 320
A + LC EP +VE E AC
Sbjct: 308 LA-SSLCRSREPALVE-EGGRLYAC 330
>gi|10954710 hypothetical ABC-transporter gene~similar to moaD gene
[Agrobacterium rhizogenes] >gi|8918710|dbj|BAA97775.1|
(AB039932) hypothetical ABC-transporter gene~similar to
moaD gene [Agrobacterium rhizogenes]
>gi|10567374|dbj|BAB16183.1| (AP002086) hypothetical
ABC-transporter gene~similar to moaD gene [Agrobacterium
rhizogenes]
Length = 603
Score = 257 bits (651), Expect = 9e-68
Identities = 136/320 (42%), Positives = 191/320 (59%), Gaps = 6/320 (1%)
Query: 3 ETVLKVENLKKYFPIR--GLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTI 60
E VL VEN + + +R F VKAV VSF +K GE FG+VGESGCGK+T R +
Sbjct: 276 EAVLTVENATRTYSVRRRDAFNAFNEVKAVRDVSFTVKAGENFGIVGESGCGKSTLTRLL 335
Query: 61 LRLIEPTDGKIIFMGKDVTKLKGEELKWFRRKAQIMFQDPYSSLDPRQTVFQIIMEPVKF 120
L +P G+I F+GK+++ L L R+ Q++ QDPY SL ++ ++I EP+
Sbjct: 336 AWLEQPNAGRIAFLGKNLSNLSARSLTEMRKSFQLLLQDPYGSLPAGMSIIRMIEEPLLI 395
Query: 121 HGIQVDDPEEFVIRLLESVGLNEMHLYRYPHEFSGGQRQRIALARLLALKPEFIVLDEPT 180
HG+ D E+ + VGL+ R P S GQRQRI +AR L LKP ++LDE
Sbjct: 396 HGVARRDAEQRAQEAMREVGLHADLAERLPVGLSAGQRQRINIARALVLKPRLLILDETL 455
Query: 181 SALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVGPADRI 240
SALD QA +L+ K LQ HGF+Y+FISHDL +V+ + R+ VMYLG++VE+ +
Sbjct: 456 SALDQVEQAELLDLFKRLQAAHGFSYIFISHDLALVRRICHRVAVMYLGRIVELADNKTL 515
Query: 241 FENPLHPYTQMLFSAIPIPDPDLAREMKKKRMKVTGEPPSPINPPKGCRFHPRCPYAKAG 300
FE+P HPYT+ L SA+P + + + + GEPPSPI+ P GC F RCP A++
Sbjct: 516 FEHPHHPYTRALLSAMPTLEEN---RFPGAQYLLDGEPPSPIHLPVGCSFRSRCPRAQSD 572
Query: 301 LCDKEEPPMVEVEKDHYVAC 320
C+K +P + + +Y AC
Sbjct: 573 -CEKTDPMLEGSDGGNYAAC 591
Score = 129 bits (321), Expect = 5e-29
Identities = 93/268 (34%), Positives = 135/268 (49%), Gaps = 18/268 (6%)
Query: 1 MTETVLKVENLKKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTI 60
M++ +L V NL G R I VD V F ++ GE GLVGE+G GK+ R +
Sbjct: 1 MSDPILAVSNLSVDLLRDGSKRRI-----VDNVDFALQPGEVLGLVGEAGSGKSVLARAM 55
Query: 61 LRLIE-PTD---GKIIFMGKDVTKLKGEELKWFR-RKAQIMFQDPYSSLDPRQTVFQIIM 115
+ I+ P D G++IF GKDV L L+ R + + +P SLDPR + I+
Sbjct: 56 VNAIQAPLDISSGQVIFEGKDVLSLDARGLRSIRGNRIGFIGANPMGSLDPRLPIGHQIV 115
Query: 116 EPVKFHGIQVD----DPEEFVIRLLESVGLNE--MHLYRYPHEFSGGQRQRIALARLLAL 169
E K ++ D + +E V+ LL V + + P +FSGG QR+ + L
Sbjct: 116 E--KLRSVRPDIGKAEAKEKVLDLLGRVHIPSPRSRFHEAPFQFSGGMMQRVMIVDALVS 173
Query: 170 KPEFIVLDEPTSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLG 229
+P ++ D T LDV+V A I+ + L+E +LFIS L VV +++R VM G
Sbjct: 174 EPSLVIADNITQPLDVTVAAQIIRLIDNLRESLDTAFLFISSSLPVVSKIAERTLVMQGG 233
Query: 230 KLVEVGPADRIFENPLHPYTQMLFSAIP 257
++VE G I NP YT+ L S IP
Sbjct: 234 RIVEQGETADIAANPQQAYTRALLSRIP 261
>pir||A72452 probable peptide transport ATP-binding protein APE2261 - Aeropyrum
pernix (strain K1) >gi|5105962|dbj|BAA81273.1|
(AP000064) 320aa long hypothetical peptide transport
ATP-binding protein [Aeropyrum pernix]
Length = 320
Score = 257 bits (649), Expect = 2e-67
Identities = 140/323 (43%), Positives = 200/323 (61%), Gaps = 19/323 (5%)
Query: 5 VLKVENLKKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTILRLI 64
VL +++LK ++ + G V+AVDGVS + +GE +VGESG GK+T +I RLI
Sbjct: 7 VLDIQDLKVHY-----YTLTGIVRAVDGVSLSVNKGEWISIVGESGSGKSTLALSIPRLI 61
Query: 65 EP----TDGKIIFMGKDVTKLKGEELKWFR-RKAQIMFQDPYSSLDPRQTVFQIIMEPVK 119
P G+I++ G D+ L GEEL+ +R R+ ++FQDP + LDP +TV I E +
Sbjct: 62 MPPGRIVGGRILYSGVDLLSLAGEELRRYRGREIGMVFQDPTAYLDPYRTVGSQIAESLL 121
Query: 120 FHGIQVD--DPEEFVIRLLESVGLNEMHLYRYPHEFSGGQRQRIALARLLALKPEFIVLD 177
HG+ + E LE VG+ YPH+ SGGQRQR+A+A +AL+P+ ++ D
Sbjct: 122 EHGLASSGSEAESMAGDALELVGIPRDRASVYPHQLSGGQRQRVAIAAAVALEPKILIAD 181
Query: 178 EPTSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVGPA 237
EPT+ALDV VQA I++ +K+LQE+ G T + ++HD+G+ SDRI VMY G+LVE+GPA
Sbjct: 182 EPTTALDVVVQAKIMDLMKKLQEERGLTVMLVTHDIGLAAEYSDRIAVMYAGELVEIGPA 241
Query: 238 DRIFENPLHPYTQMLFSAIPIPDPDLAREMKKKRMKVTGEPPSPINPPKGCRFHPRCPYA 297
+ + NP+HPYT+ML ++P P D RE+K + G PP NPP GCRFHPRCP
Sbjct: 242 EDVVSNPIHPYTEMLIKSVPDPWED--REVK----PIPGSPPDLRNPPPGCRFHPRCP-L 294
Query: 298 KAGLCDKEEPPMVEVEKDHYVAC 320
+ LC P + V+ +C
Sbjct: 295 RQPLCTNTRPSLRMVDGGRGHSC 317
>pir||F71014 probable dipeptide transport ATP-binding protein dppD - Pyrococcus
horikoshii >gi|3257835|dbj|BAA30518.1| (AP000006) 329aa
long hypothetical dipeptide transport ATP-binding
protein dppD [Pyrococcus horikoshii]
Length = 329
Score = 256 bits (646), Expect = 4e-67
Identities = 141/335 (42%), Positives = 209/335 (62%), Gaps = 25/335 (7%)
Query: 3 ETVLKVENLKKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTILR 62
E +L+V +L +F + G VKA++ VSF++ +GETF LVGE+GCGK+ T R I +
Sbjct: 6 EPILQVRDLTVHF-----YTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQ 60
Query: 63 LIEP----TDGKIIFMGKD-----VTKLKGEELKWFR-RKAQIMFQDPYSSLDPRQTVFQ 112
LIE G++++ +D + KL EE++ R + +FQDP+SSLDP TV
Sbjct: 61 LIESPGRIVGGQVLYYREDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHSSLDPLYTVGY 120
Query: 113 IIMEPVKFHGI--QVDDPEEFVIRLLESVGLNE--MHLYRYPHEFSGGQRQRIALARLLA 168
I E ++ HG + + + + +L+SV + + + YPHE SGG +QR+ + L+
Sbjct: 121 QIAEAMEVHGKIKNIKEGIKKAVDILKSVLIPDPQRRVNNYPHELSGGMKQRVVIGIGLS 180
Query: 169 LKPEFIVLDEPTSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYL 228
P ++ DEPT+ALDV+VQA IL+ + +L+EK+ T + I+H+LGVV +DR+ VMY
Sbjct: 181 NNPRILIADEPTTALDVTVQAQILDLINQLKEKYKATVILITHNLGVVAETADRVAVMYA 240
Query: 229 GKLVEVGPADRIFENPLHPYTQMLFSAIPIPDPDLAREMKKKRMKVTGEPPSPINPPKGC 288
GK+VE+G D+IF+NPLHPYTQ L A+P P + +K + G P+ INPP GC
Sbjct: 241 GKIVEIGTVDQIFKNPLHPYTQGLLRAVPNPLTKI-----EKLEAIPGTVPNLINPPSGC 295
Query: 289 RFHPRCPYAKAGLCDKEEPPMVEVEKDHYVACWLY 323
RFHPRCP A +C ++ P + E+E H+VAC LY
Sbjct: 296 RFHPRCPKA-MDICKQKVPELKEIEPGHFVACHLY 329
>pir||C72424 oligopeptide ABC transporter, ATP-binding protein - Thermotoga
maritima (strain MSB8)
>gi|4980544|gb|AAD35152.1|AE001692_9 (AE001692)
oligopeptide ABC transporter, ATP-binding protein
[Thermotoga maritima]
Length = 331
Score = 256 bits (646), Expect = 4e-67
Identities = 147/336 (43%), Positives = 212/336 (62%), Gaps = 26/336 (7%)
Query: 3 ETVLKVENLKKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTILR 62
E VL++ +LK YF + T G VKAVDGVSF+I+RGE GLVGESGCGK+ T ++ILR
Sbjct: 2 EKVLEIRDLKVYFDL-----TEGTVKAVDGVSFDIRRGEILGLVGESGCGKSVTAQSILR 56
Query: 63 LIEPT----DGKIIFM--GK--DVTKL--KGEELKWFRRK-AQIMFQDPYSSLDPRQTVF 111
++ + +G+I+F GK D+T+L +GEE++ R K ++FQ+P +S P TV
Sbjct: 57 ILPKSARIVNGEIVFHRNGKTLDLTRLDPEGEEIRDIRGKDISMIFQEPMASFSPVYTVG 116
Query: 112 QIIMEPVKFH-GIQVDDPEEFVIRLLESVGLN--EMHLYRYPHEFSGGQRQRIALARLLA 168
++E + H + ++ + V+ +L+ V + E + YP E SGG QR +A ++
Sbjct: 117 AQMIEAILLHENVSKEEARKRVVEMLKKVKIPNAEKVVDMYPFELSGGMLQRCMIAMAMS 176
Query: 169 LKPEFIVLDEPTSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYL 228
L P ++ DEPT+ALDV++QA IL +KELQ+++ + L I+HD+GVV M+DR+ VMYL
Sbjct: 177 LNPTLLLADEPTTALDVTIQAQILYLMKELQKEYHSSILLITHDMGVVAQMADRVAVMYL 236
Query: 229 GKLVEVGPADRIFENPLHPYTQMLFSAIPIPDPDLAREMKKKRMK-VTGEPPSPINPPKG 287
G +VE +F+NPLHPYTQ L +IP ++K R++ + G P P N P G
Sbjct: 237 GNIVETAEVFELFKNPLHPYTQALLRSIP------KIGIRKTRLETIKGMVPDPYNLPTG 290
Query: 288 CRFHPRCPYAKAGLCDKEEPPMVEVEKDHYVACWLY 323
CRFH RC GLCD +EPP VEV+ H V C+LY
Sbjct: 291 CRFHNRCEKFMKGLCDVKEPPEVEVKPGHKVKCFLY 326
>gb|AAG09260.1| (AF176664) EppD [EDTA-degrading bacterium BNC1]
Length = 610
Score = 252 bits (638), Expect = 3e-66
Identities = 135/284 (47%), Positives = 185/284 (64%), Gaps = 6/284 (2%)
Query: 5 VLKVENLKKYFPI--RGLFR-TIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTIL 61
+L + N+ K+FP+ RG+ R +G +KAV GV +++ G T G+VGESG GKTT R++
Sbjct: 310 ILSMRNVGKHFPVYSRGVIRGRVGVIKAVAGVDLDVEAGTTLGIVGESGSGKTTLIRSLF 369
Query: 62 RLIEPTDGKIIFMGKDVTKLKGEELKWFRRKAQIMFQDPYSSLDPRQTVFQIIMEPVKFH 121
L T G I+F G+DV ++ + + R+ Q++FQDPY+SLDP TV I+MEP +
Sbjct: 370 NLEPITHGTILFDGQDVHRMPPRDRRRMRKCVQMVFQDPYASLDPMMTVRDILMEPAVIN 429
Query: 122 GIQVDDPEEFVIRLLESVGLNEMHLYRYPHEFSGGQRQRIALARLLALKPEFIVLDEPTS 181
+ E V+ LLE V L H RYP+EFSGGQRQRIA+AR L L P +VLDEP S
Sbjct: 430 RMDRKLAERRVMELLERVHLKPEHAARYPNEFSGGQRQRIAIARALMLYPRLLVLDEPVS 489
Query: 182 ALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVGPADRIF 241
+LDVS+QA +L LKELQ+ +YLF+SHDL VV ++ + VMY G++VE G D +F
Sbjct: 490 SLDVSIQAEVLTLLKELQKDLNLSYLFVSHDLSVVAEIAHSVIVMYRGRIVERGRVDELF 549
Query: 242 ENPLHPYTQMLFSAIPIPDPDLAREMKKKRMKVTGEP-PSPINP 284
NP HPYT+ L SA+PIPDP E +++R+ + SPI P
Sbjct: 550 RNPKHPYTRALLSAVPIPDP--RTERRRERIVFNSDTLASPITP 591
Score = 149 bits (372), Expect = 5e-35
Identities = 89/238 (37%), Positives = 135/238 (56%), Gaps = 7/238 (2%)
Query: 27 VKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTILRLIEPTD---GKIIFMGKDVTKLKG 83
++AV VS+ I GE LVGESG GK+ + ++ L+ G I + G+++
Sbjct: 37 IEAVRDVSWSIGSGEVLALVGESGSGKSVSALAVMGLLPRNARVAGSIRWRGEELLGASE 96
Query: 84 EELKWFR-RKAQIMFQDPYSSLDPRQTVFQIIMEPVKFHG-IQVDDPEEFVIRLLESVGL 141
+ + R + ++ QDP +SL+P T+ I E ++ H + + E + LLE++G+
Sbjct: 97 KRRRALRGSRIGLVPQDPMTSLNPVYTIGAQIREGIRAHQKLSEREMAERTLELLETMGI 156
Query: 142 NEMH--LYRYPHEFSGGQRQRIALARLLALKPEFIVLDEPTSALDVSVQANILNTLKELQ 199
+ YPHE SGG RQR+ +A +A P+ I+ DE T+ALDV+VQA +L+ LK+ Q
Sbjct: 157 PHARERMNSYPHELSGGMRQRVVIAMAMANNPDLIIADEATTALDVTVQAQVLDALKKAQ 216
Query: 200 EKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVGPADRIFENPLHPYTQMLFSAIP 257
G L I+HDLGVV +DR+ VM G++VE G D IF P YT+ L +IP
Sbjct: 217 ALTGAALLLITHDLGVVAGRADRVAVMQRGEVVEQGTVDEIFYQPASSYTRKLLHSIP 274
>pir||H75117 peptide abc transporter ATP-binding protein PAB1874 - Pyrococcus
abyssi (strain Orsay) >gi|5458168|emb|CAB49657.1|
(AJ248285) PEPTIDE ABC TRANSPORTER ATP-BINDING PROTEIN
[Pyrococcus abyssi]
Length = 329
Score = 252 bits (636), Expect = 5e-66
Identities = 137/335 (40%), Positives = 208/335 (61%), Gaps = 25/335 (7%)
Query: 3 ETVLKVENLKKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTILR 62
E +L+V NL +F + G VKA++ VSF++ +GETF LVGE+GCGK+ T R I +
Sbjct: 6 EPILQVRNLTVHF-----YTYAGIVKAIEKVSFDVYKGETFALVGETGCGKSVTSRAITQ 60
Query: 63 LIEP----TDGKIIFMGKD-----VTKLKGEELKWFR-RKAQIMFQDPYSSLDPRQTVFQ 112
LIE +G++++ D + KL EE++ R + +FQDP++SLDP TV
Sbjct: 61 LIESPGRIVEGQVLYYRDDGSVVDLLKLSEEEIRKIRGNEIAYIFQDPHASLDPLYTVGY 120
Query: 113 IIMEPVKFHGI--QVDDPEEFVIRLLESVGLNE--MHLYRYPHEFSGGQRQRIALARLLA 168
I E ++ HG + + + + +L+SV + + + YPHE SGG +QR+ + ++
Sbjct: 121 QIAEAMEVHGKIKSIKEGIQKAVDILKSVLIPDPARRVNNYPHELSGGMKQRVVIGIGIS 180
Query: 169 LKPEFIVLDEPTSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYL 228
P ++ DEPT+ALDV++QA IL+ L +++EK+ T + I+H+LGVV +DR+ VMY
Sbjct: 181 NNPRILIADEPTTALDVTIQAQILDLLNKMKEKYKATVILITHNLGVVAETADRVAVMYA 240
Query: 229 GKLVEVGPADRIFENPLHPYTQMLFSAIPIPDPDLAREMKKKRMKVTGEPPSPINPPKGC 288
GK+VE+G D+IF+NPLHPYTQ L A+P P + +K + G P+ I PP GC
Sbjct: 241 GKIVEIGTVDQIFKNPLHPYTQGLLRAVPNPLTKI-----EKLEAIPGTVPNLITPPGGC 295
Query: 289 RFHPRCPYAKAGLCDKEEPPMVEVEKDHYVACWLY 323
RFHPRCP + +C ++ P + E+E H+VAC LY
Sbjct: 296 RFHPRCPKVMS-ICKEKVPELKEIEPGHFVACHLY 329
>pir||D83419 probable ATP-binding component of ABC transporter PA1807 [imported]
- Pseudomonas aeruginosa (strain PAO1)
>gi|9947791|gb|AAG05196.1|AE004607_2 (AE004607) probable
ATP-binding component of ABC transporter [Pseudomonas
aeruginosa]
Length = 536
Score = 251 bits (635), Expect = 7e-66
Identities = 135/256 (52%), Positives = 181/256 (69%), Gaps = 4/256 (1%)
Query: 3 ETVLKVENLKKYFPIR-GLFR-TIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTI 60
ET+L V++L+ +FPIR G+FR T+ VKAVDGV+FE+ RG+T G+VGESG GK+T G I
Sbjct: 272 ETLLAVDDLRVWFPIRKGVFRRTVDHVKAVDGVNFELPRGQTLGIVGESGSGKSTLGLAI 331
Query: 61 LRLIEPTDGKIIFMGKDVTKLKGEELKWFRRKAQIMFQDPYSSLDPRQTVFQIIMEPVKF 120
LRL+E + G I F G + L +++ RR+ Q++FQDPY SL PR V +I+ E ++
Sbjct: 332 LRLLE-SQGGIRFEGTRLDGLAQHDVRPLRREMQVVFQDPYGSLSPRMCVGEIVGEGLRI 390
Query: 121 HGIQVD-DPEEFVIRLLESVGLNEMHLYRYPHEFSGGQRQRIALARLLALKPEFIVLDEP 179
H I + + E+ +I L VGL+ YRYPHEFSGGQRQRIA+AR L LKP I+LDEP
Sbjct: 391 HRIGSEAEQEQAIIDALVEVGLDPQTRYRYPHEFSGGQRQRIAIARALVLKPALILLDEP 450
Query: 180 TSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVGPADR 239
TSALD +VQ ++ L++LQ K+ TYLFISHDL VVK +S ++ V+ GK+VE G A+
Sbjct: 451 TSALDRTVQRQVVELLRQLQGKYNLTYLFISHDLAVVKALSHQLMVVRHGKVVEQGSAEA 510
Query: 240 IFENPLHPYTQMLFSA 255
+F +P HPYTQ L A
Sbjct: 511 VFASPQHPYTQQLLEA 526
Score = 185 bits (464), Expect = 8e-46
Identities = 108/270 (40%), Positives = 164/270 (60%), Gaps = 14/270 (5%)
Query: 1 MTETVLKVENLKKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTI 60
M+E +L++ +L F + G R + V+GVSF+I++GET LVGESG GK+ T +I
Sbjct: 1 MSENILEIRDLAVEF-LSGEQRQ----RVVEGVSFDIRQGETLALVGESGSGKSVTAHSI 55
Query: 61 LRLIEPT-----DGKIIFMGKDVTKLKGEELKWFR-RKAQIMFQDPYSSLDPRQTVFQII 114
LRL+ + G I + G+D+ KL L+ R + ++FQ+P +SL+P T+ + +
Sbjct: 56 LRLLPYSVASHPAGSIHYQGEDLLKLPERRLRGIRGNRIAMVFQEPMTSLNPLHTIEKQL 115
Query: 115 MEPVKFH-GIQVDDPEEFVIRLLESVGLNE--MHLYRYPHEFSGGQRQRIALARLLALKP 171
E + H G+ ++ LLE VG+ E L YPHE SGGQRQR+ +A LA +P
Sbjct: 116 AEVLALHKGLGGAKASARILELLELVGIPEPAKRLKAYPHELSGGQRQRVMIAMALACEP 175
Query: 172 EFIVLDEPTSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKL 231
+ ++ DEPT+ALDV+VQ IL+ LK+LQ + G + L I+HDL +V+ ++ R+ VM G++
Sbjct: 176 QLLIADEPTTALDVTVQLKILDLLKDLQARLGMSLLLITHDLNLVRRIAHRVCVMQQGRI 235
Query: 232 VEVGPADRIFENPLHPYTQMLFSAIPIPDP 261
VE +F P HPYT+ L +A P P
Sbjct: 236 VEQASCQELFAAPRHPYTRELLNAEPSGAP 265
>emb|CAC11411.1| (AL445063) oligopeptide transport ATP-binding protein appF related
protein [Thermoplasma acidophilum]
Length = 314
Score = 251 bits (635), Expect = 7e-66
Identities = 139/327 (42%), Positives = 202/327 (61%), Gaps = 25/327 (7%)
Query: 5 VLKVENLKKYFPI--RGLFRTIG-----WVKAVDGVSFEIKRGETFGLVGESGCGKTTTG 57
+ ++N+KKY+ RGL + +V+A+D VS I G G+VGESG GK+T G
Sbjct: 4 IYSLKNVKKYYLAQKRGLIDALVKVPKIYVRALDDVSISIMDGNVIGVVGESGSGKSTMG 63
Query: 58 RTILRLIEPTDGKIIFMGKDVTKLKGEELKWFRRKAQIMFQDPYSSLDPRQTVFQIIMEP 117
+ ++ L PTDG++ F G VTK E R++ ++FQ+P +SL+P+ V I+ EP
Sbjct: 64 KVMVTLETPTDGELYFKGTRVTK---SEYPKIRKQVDMVFQNPATSLNPKMKVKDIVSEP 120
Query: 118 VKFHGIQVDDPEEFVIRLLESVGLNEMHLY-RYPHEFSGGQRQRIALARLLALKPEFIVL 176
+ E + ++ VGL+ + + E SGGQ QR+A+AR L KPE +VL
Sbjct: 121 LGHFD------EGAIKEVILKVGLSYDEVKDKQSRELSGGQVQRVAIARALMKKPELLVL 174
Query: 177 DEPTSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVGP 236
DEPTSALD S+QA +LN L +LQ ++ TY+FI+H++ V KY+SD I V+Y GK+VE GP
Sbjct: 175 DEPTSALDESIQAQVLNLLVDLQTEYKMTYIFITHNILVAKYISDYIVVLYAGKIVEYGP 234
Query: 237 ADRIFENPLHPYTQMLFSAIPIPDPDLAREMKKKRMKVTGEPPSPINPPKGCRFHPRCPY 296
+ PLHPYTQ+L S++P D +++K G+ PS IN P+GCRF+PRCP+
Sbjct: 235 TSEVLSKPLHPYTQLLLSSVPTVD---VKDVKPP----VGDVPSLINLPQGCRFNPRCPF 287
Query: 297 AKAGLCDKEEPPMVEVEKDHYVACWLY 323
C KEEPP++ +++ VACWLY
Sbjct: 288 VME-KCRKEEPPLISQGQNYQVACWLY 313
>pir||H82355 peptide ABC transporter, ATP-binding protein VC0170 [imported] -
Vibrio cholerae (group O1 strain N16961)
>gi|9654573|gb|AAF93346.1| (AE004107) peptide ABC
transporter, ATP-binding protein [Vibrio cholerae]
Length = 571
Score = 250 bits (632), Expect = 2e-65
Identities = 132/261 (50%), Positives = 181/261 (68%), Gaps = 5/261 (1%)
Query: 2 TETVLKVENLKKYFPIR-GLFRTIG-WVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRT 59
T +LKVEN+ F + LF + +V+A + VSF + GETFGLVGESG GK+T R
Sbjct: 299 TGPLLKVENVNLRFVTKDSLFESRREYVQASNNVSFAVHEGETFGLVGESGSGKSTIARV 358
Query: 60 ILRLIEPTDGKIIFMGKDVTKLKGE-ELKWFRRKAQIMFQDPYSSLDPRQTVFQIIMEPV 118
I L +P G++ F G D+T LK E E + RR+ Q++FQ+PY+S++PR +F II EP+
Sbjct: 359 IAGLYQPNAGRVTFEGIDLTALKSEHERRPLRRQMQMVFQNPYTSMNPRMKIFDIIAEPI 418
Query: 119 KFHGIQVDDPE--EFVIRLLESVGLNEMHLYRYPHEFSGGQRQRIALARLLALKPEFIVL 176
+FH + + E + V LLE VGL +M +YPHEFSGGQRQRI++AR LA +P ++
Sbjct: 419 RFHKLTRSESETRQIVNDLLEHVGLGKMAGLKYPHEFSGGQRQRISIARALATRPRLLIC 478
Query: 177 DEPTSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVGP 236
DEPTSALDVSVQA ILN LK+LQ++ T LFISHDL V++ M DR+GVM +G L+EV P
Sbjct: 479 DEPTSALDVSVQAQILNLLKDLQDELNLTMLFISHDLPVIRQMCDRVGVMQMGTLLEVAP 538
Query: 237 ADRIFENPLHPYTQMLFSAIP 257
+++F +P H Y++ L S +P
Sbjct: 539 TEQLFTDPQHEYSKKLISLMP 559
Score = 188 bits (472), Expect = 9e-47
Identities = 107/271 (39%), Positives = 166/271 (60%), Gaps = 15/271 (5%)
Query: 4 TVLKVENLKKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTILRL 63
++L+V+NL+ +P R G AV ++ +I+RGE G+VGESG GK+T G ++ L
Sbjct: 2 SLLEVKNLRIEYPSRH-----GVHAAVKSLTLDIQRGEIVGVVGESGAGKSTVGNAVIDL 56
Query: 64 IEP----TDGKIIFMGKDVTKLKGEELKWFR-RKAQIMFQDPYSSLDPRQTVFQIIMEPV 118
+ P G++ G+ ++ L + ++ R K +FQDP +SL+P TV + E +
Sbjct: 57 LSPPGTIAGGEVYLNGEKISGLSPQAMREVRGSKIGFIFQDPMTSLNPLFTVEHQLTETI 116
Query: 119 KFHGIQVDDPEEF--VIRLLESVGLN--EMHLYRYPHEFSGGQRQRIALARLLALKPEFI 174
+ +QV E + + L++ VG+ E L +YPH+FSGG RQR+ +A LA +P+ I
Sbjct: 117 HAN-MQVSAEEAYQRALSLMKQVGIPQPENRLKQYPHQFSGGMRQRVVIAIALAGEPDLI 175
Query: 175 VLDEPTSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEV 234
+ DEPT+ALDVS+Q ILN ++EL +K+ + ++HD+GVV ++DR+ VMY G LVE
Sbjct: 176 IADEPTTALDVSIQDQILNLIRELCKKNNVGCMLVTHDMGVVSNVTDRVAVMYRGDLVEF 235
Query: 235 GPADRIFENPLHPYTQMLFSAIPIPDPDLAR 265
GP ++ P HPYT+ L SA+P D L R
Sbjct: 236 GPTAKVLGTPEHPYTRSLISAVPRSDRKLDR 266
>sp|Q11040|YC81_MYCTU HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PROTEIN RV1281C
>gi|7445626|pir||A70756 probable ABC-type peptide
transport protein - Mycobacterium tuberculosis (strain
H37RV) >gi|1480305|emb|CAB00901.1| (Z77137) oppD
[Mycobacterium tuberculosis]
Length = 612
Score = 247 bits (625), Expect = 1e-64
Identities = 127/260 (48%), Positives = 173/260 (65%), Gaps = 3/260 (1%)
Query: 5 VLKVENLKKYFPIRG---LFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTIL 61
V++V +L K + + L R IG V+AVDG+S E+++G T G+VGESG GK+TT IL
Sbjct: 349 VVRVRHLVKTYRLAKGVVLRRAIGEVRAVDGISLELRQGRTLGIVGESGSGKSTTLHEIL 408
Query: 62 RLIEPTDGKIIFMGKDVTKLKGEELKWFRRKAQIMFQDPYSSLDPRQTVFQIIMEPVKFH 121
L P G I +G DV L E + RR Q++FQDP +SLDPR VF +I EP++ +
Sbjct: 409 ELAAPQSGSIEVLGTDVATLGTAERRSLRRDIQVVFQDPVASLDPRLPVFDLIAEPLQAN 468
Query: 122 GIQVDDPEEFVIRLLESVGLNEMHLYRYPHEFSGGQRQRIALARLLALKPEFIVLDEPTS 181
G ++ V LL+ VGL RYP EFSGGQ+QRI +AR LAL+P+ + LDEP S
Sbjct: 469 GFGKNETHARVAELLDIVGLRHGDASRYPAEFSGGQKQRIGIARALALQPKILALDEPVS 528
Query: 182 ALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVGPADRIF 241
ALDVS+QA I+N L +LQE+ G +YLF+SHDL VVK+++ ++ VM G +VE G ++ +F
Sbjct: 529 ALDVSIQAGIINLLLDLQEQFGLSYLFVSHDLSVVKHLAHQVAVMLAGTVVEQGDSEEVF 588
Query: 242 ENPLHPYTQMLFSAIPIPDP 261
NP H YT+ L A+P PDP
Sbjct: 589 GNPKHEYTRRLLGAVPQPDP 608
Score = 177 bits (445), Expect = 1e-43
Identities = 112/309 (36%), Positives = 164/309 (52%), Gaps = 14/309 (4%)
Query: 21 FRTIGW-VKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTILRLIEP---TDGKIIFMGK 76
FRT G V AV G+S+ ++ GE +VGESG GK+ ++ L+ G + G
Sbjct: 14 FRTDGDPVTAVRGISYRVEPGEVVAMVGESGSGKSAAAMAVVGLLPEYAQVRGSVRLQGT 73
Query: 77 DVTKLKGEELKWFRRKA-QIMFQDPYSSLDPRQTVFQIIMEPVKFHGIQVDDP--EEFVI 133
++ L + FR KA +FQDP S+L P TV I E ++ H +V +
Sbjct: 74 ELLGLADNAMSRFRGKAIGTVFQDPMSALTPVYTVGDQIAEAIEVHQPRVGKKAARRRAV 133
Query: 134 RLLESVGLNE--MHLYRYPHEFSGGQRQRIALARLLALKPEFIVLDEPTSALDVSVQANI 191
LL+ VG+++ +PHE SGG+RQR+ +A +A P+ ++ DEPT+ALDV+VQA I
Sbjct: 134 ELLDLVGISQPQRRSRAFPHELSGGERQRVVIAIAIANDPDLLICDEPTTALDVTVQAQI 193
Query: 192 LNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVGPADRIFENPLHPYTQM 251
L+ LK ++ G L I+HDLGVV +DR VMY G++VE + ++ + PYT
Sbjct: 194 LDVLKAARDVTGAGVLIITHDLGVVAEFADRALVMYAGRVVESAGVNDLYRDRRMPYTVG 253
Query: 252 LFSAIPIPDPDLAREMKKKRMKVTGEPPSPINPPKGCRFHPRCPYAKAGLCDKEEPPMVE 311
L ++P D + + + G PPS GC F PRCP C EP +++
Sbjct: 254 LLGSVPRLDAAQGTRL----VPIPGAPPSLAGLAPGCPFAPRCPLV-IDECLTAEPELLD 308
Query: 312 VEKDHYVAC 320
V DH AC
Sbjct: 309 VATDHRAAC 317
>sp|P18766|AMIF_STRPN OLIGOPEPTIDE TRANSPORT ATP-BINDING PROTEIN AMIF
>gi|98019|pir||S11153 oligopeptide transport protein
amiF - Streptococcus pneumoniae
>gi|47347|emb|CAA35217.1| (X17337) AmiF protein
[Streptococcus pneumoniae]
Length = 308
Score = 247 bits (623), Expect = 2e-64
Identities = 139/293 (47%), Positives = 186/293 (63%), Gaps = 26/293 (8%)
Query: 29 AVDGVSFEIKRGETFGLVGESGCGKTTTGRTILRLIEPTDGKIIFMGKDVTKLKG-EELK 87
AV +F I +GETF LVGESG GKTT GR I+ L + ++G IIF G+ + K E+
Sbjct: 24 AVKNANFFINKGETFSLVGESGSGKTTIGRAIIGLNDTSNGDIIFDGQKINGKKSREQAA 83
Query: 88 WFRRKAQIMFQDPYSSLDPRQTVFQIIMEPVKFHGIQVDDPE--EFVIRLLESVGLNEMH 145
R+ Q++FQDP +SL+ R TV II E + H + D+ E E V ++ VGL H
Sbjct: 84 ELIRRIQMIFQDPAASLNERATVDYIISEGLYNHRLFKDEEERKEKVQSIIREVGLLAEH 143
Query: 146 LYRYPHEFSGGQRQRIALARLLALKPEFIVLDEPTSALDVSVQANILNTLKELQEKHGFT 205
L RYPHEFSGGQRQRI +AR L ++P+F++ DEP SALDVSV+A +LN LK+ Q++ G T
Sbjct: 144 LTRYPHEFSGGQRQRIGIARALVMQPDFVIADEPISALDVSVRAQVLNLLKKFQKELGLT 203
Query: 206 YLFISHDLGVVKYMSDRIGVMYLGKLVEVGPADRIFENPLHPYTQMLFSAIPIPDPDLAR 265
YLFI+HDL VV+++SDRI V+Y G +VEV + +F NP+HPYTQ L SA+PIPDP L R
Sbjct: 204 YLFIAHDLSVVRFISDRIAVIYKGVIVEVAETEELFNNPIHPYTQALLSAVPIPDPILER 263
Query: 266 EMKKKRMKVTGEPPSPINPPKGCRFHPRCPYAKAGLCDKEEPPMVEVEKDHYV 318
KK +KV +G + + ++P MVE+ HYV
Sbjct: 264 ---KKVLKVY----------EGSQHD----------YETDKPSMVEIRPGHYV 293
>pir||E75068 dipeptide abc transporter, ATP-binding protein (dppf) PAB1347 -
Pyrococcus abyssi (strain Orsay)
>gi|5458955|emb|CAB50442.1| (AJ248287) dipeptide ABC
transporter, ATP-binding protein (dppF) [Pyrococcus
abyssi]
Length = 319
Score = 247 bits (623), Expect = 2e-64
Identities = 142/323 (43%), Positives = 201/323 (61%), Gaps = 12/323 (3%)
Query: 5 VLKVENLKKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTILRLI 64
+L+V+NL K F GL V+AVD V+F IK GE LVGESG GKTT G+ ILRLI
Sbjct: 2 LLEVQNLTKIFT-SGLIGGYQ-VRAVDNVTFSIKEGEIVSLVGESGSGKTTIGKLILRLI 59
Query: 65 EPTDGKIIFMGKDVTKLKGEEL-KWFRRKAQIMFQDPYSSLDPRQTVFQIIMEPVKFHGI 123
+PT GKI+F G+D+ ++L ++ + Q +FQDP++S +P V ++ +
Sbjct: 60 KPTSGKILFKGEDIWSFDKDKLMNYYYKNVQAVFQDPFASFNPLYKVDRVFDLVFRTFLK 119
Query: 124 QVDDPE--EFVIRLLESVGLNEMHLY-RYPHEFSGGQRQRIALARLLALKPEFIVLDEPT 180
V D E E V R LESVGLN + ++PH+ SGGQ QRI +AR L ++P ++ DE
Sbjct: 120 NVSDVEKDELVRRALESVGLNPREILGKFPHQLSGGQLQRILIARALLVEPSLLIADEAV 179
Query: 181 SALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVGPADRI 240
S LD S + ++LN L E ++ HG + +FI+HDL + Y+SD+I +MY G +VE G +++
Sbjct: 180 SMLDASTRIDVLNLLGEFRDNHGTSVIFITHDLALGYYISDKIIIMYRGSIVEWGDTEKV 239
Query: 241 FENPLHPYTQMLFSAIPIPDPDLAREMKKKRMKVTGEPPSPINPPKGCRFHPRCPYAKAG 300
F+NPLHPYT+ML ++ PDL + + K ++ E + KGC+F PRC AK
Sbjct: 240 FDNPLHPYTKMLLESV----PDLNVKWEFKGIEPERE-EGKVWELKGCKFAPRCSLAK-D 293
Query: 301 LCDKEEPPMVEVEKDHYVACWLY 323
C K P VEVEK+H+VAC LY
Sbjct: 294 KCWKIRPEPVEVEKNHWVACHLY 316
>sp|Q07734|OPPF_LACLA OLIGOPEPTIDE TRANSPORT ATP-BINDING PROTEIN OPPF
>gi|1075750|pir||B53290 oligopeptide transport protein
oppF - Lactococcus lactis subsp. lactis
>gi|308851|gb|AAA16164.1| (L18760) ATP binding protein
[Lactococcus lactis] >gi|495178|gb|AAB00534.1| (U09553)
ATP binding protein [Lactococcus lactis]
Length = 319
Score = 246 bits (622), Expect = 2e-64
Identities = 131/273 (47%), Positives = 183/273 (66%), Gaps = 3/273 (1%)
Query: 5 VLKVENLKKYFPIRGLF--RTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTILR 62
+L +++LK Y+PIR F R V AVDGV I GET GLVGESG GK+T G+TI+
Sbjct: 4 ILNLKDLKVYYPIRSGFFNRVTDNVLAVDGVDLTIHEGETVGLVGESGSGKSTIGKTIVG 63
Query: 63 LIEPTDGKIIFMGKDVTKLKGEELKWFRRKAQIMFQDPYSSLDPRQTVFQIIMEPVK-FH 121
L + T G++I+ G+DV+K K + + Q++FQD +SSL+PR+T++ II EP++ F
Sbjct: 64 LEQMTSGQLIYKGQDVSKKKIRNQLKYNKDVQMIFQDAFSSLNPRKTIYDIIAEPIRNFE 123
Query: 122 GIQVDDPEEFVIRLLESVGLNEMHLYRYPHEFSGGQRQRIALARLLALKPEFIVLDEPTS 181
I + + + LL+ VGL + L +YP +FSGGQ+QRI +AR +A P+ IV DEP S
Sbjct: 124 KIDANTENKRIHELLDIVGLPKQALEQYPFQFSGGQQQRIGIARAVATNPKLIVADEPVS 183
Query: 182 ALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVGPADRIF 241
ALD+SVQA +LN +K +Q+ G +LFISHDLGVV++M+D I VM+ G++VE G IF
Sbjct: 184 ALDLSVQAQVLNFMKLIQKDLGIAFLFISHDLGVVRHMTDNIAVMHNGRIVEKGTRRDIF 243
Query: 242 ENPLHPYTQMLFSAIPIPDPDLAREMKKKRMKV 274
+ P H YT+ L SAIP D E +K R+KV
Sbjct: 244 DEPQHIYTKRLLSAIPSIDVTRRAENRKNRLKV 276
>gb|AAG22037.1|AF305387_4 (AF305387) OppD [Bacillus thuringiensis]
Length = 347
Score = 246 bits (622), Expect = 2e-64
Identities = 135/329 (41%), Positives = 205/329 (62%), Gaps = 20/329 (6%)
Query: 3 ETVLKVENLKKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTILR 62
+T+L+V++L+ F G V+AV GV+F++K+GET +VGESG GK+ T + ++
Sbjct: 2 KTLLEVKDLQVSFDTHA-----GEVQAVRGVTFDLKKGETLAIVGESGSGKSVTSKALMG 56
Query: 63 LIEPT-----DGKIIFMGKDVTKLKGEELKWFRRK-AQIMFQDPYSSLDPRQTVFQIIME 116
LI +G+I+F G+D+TKL +E++ R K ++FQDP +SL+P T+ IME
Sbjct: 57 LIPNPPGRIKNGEIVFEGRDLTKLTEKEMQQVRGKDIAMIFQDPMTSLNPTMTIGNQIME 116
Query: 117 P-VKFHGIQVDDPEEFVIRLLESVGLN--EMHLYRYPHEFSGGQRQRIALARLLALKPEF 173
+K G+ D + + L++ VG+ E L +YPH+FSGG RQR+ +A LA P+
Sbjct: 117 GLIKHQGMSKADARKVALELIDLVGIPNPEARLKQYPHQFSGGMRQRVVIAMALACNPKL 176
Query: 174 IVLDEPTSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVE 233
++ DEPT+ALDV++QA IL +K++Q+K +FI+HDLGVV ++DR+ VMY GK+VE
Sbjct: 177 LIADEPTTALDVTIQAQILELMKDIQQKTEAAIIFITHDLGVVANVADRVAVMYAGKVVE 236
Query: 234 VGPADRIFENPLHPYTQMLFSAIPIPDPDLAREMKKKRMKVTGEPPSPINPPKGCRFHPR 293
+G D IF NP HPYT L +++P D +++ + G PP + PPKG F PR
Sbjct: 237 IGTVDEIFYNPKHPYTWGLIASMPSLDGS-----EEELYAIPGTPPDLLKPPKGDAFAPR 291
Query: 294 CPYAKAGLCDKEEPPMVEVEKDHYVACWL 322
P A + + +PP+ +V HY A WL
Sbjct: 292 NPQA-LKIDFEMDPPLFKVSDTHYAATWL 319
>pir||C82442 probable peptide ABC transporter, ATP-binding protein VCA0588
[imported] - Vibrio cholerae (group O1 strain N16961)
>gi|9657999|gb|AAF96490.1| (AE004389) peptide ABC
transporter, ATP-binding protein, putative [Vibrio
cholerae]
Length = 530
Score = 246 bits (621), Expect = 3e-64
Identities = 126/252 (50%), Positives = 180/252 (71%), Gaps = 4/252 (1%)
Query: 4 TVLKVENLKKYFPIRGLF--RTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTIL 61
T+L+ E L+ +FPI+G + RT ++KAV +SF + +G++ GLVGESG GK+TTG IL
Sbjct: 274 TLLQAEKLRVWFPIKGGYFRRTQAYIKAVTDMSFTLAKGQSLGLVGESGSGKSTTGMAIL 333
Query: 62 RLIEPTDGKIIFMGKDVTKLKGEELKWFRRKAQIMFQDPYSSLDPRQTVFQIIMEPVKFH 121
+L+ + G I F G+D+ LK E+ +R K Q++FQDPYS+L+PR +V Q+I E ++ H
Sbjct: 334 KLLA-SQGAIRFAGQDLQALKRREMLPYRSKMQVVFQDPYSALNPRMSVAQVIGEGLRVH 392
Query: 122 G-IQVDDPEEFVIRLLESVGLNEMHLYRYPHEFSGGQRQRIALARLLALKPEFIVLDEPT 180
+ D+ + + +++ VGL+ +RYP+EFSGGQRQRIA+AR L LKPEFI+LDEPT
Sbjct: 393 SQLNDDEIDHAICAVMQEVGLDVDTRHRYPNEFSGGQRQRIAIARALVLKPEFILLDEPT 452
Query: 181 SALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVGPADRI 240
S+LD +VQA +L+ LK+LQ+K+ TYLFISHDL V++ + VM G++VE G +
Sbjct: 453 SSLDRTVQAQVLDLLKDLQQKYQLTYLFISHDLAVIRALCHHTIVMKAGEIVEHGETQSL 512
Query: 241 FENPLHPYTQML 252
FENP HPYTQ L
Sbjct: 513 FENPSHPYTQQL 524
Score = 189 bits (474), Expect = 5e-47
Identities = 111/272 (40%), Positives = 157/272 (56%), Gaps = 18/272 (6%)
Query: 1 MTETVLKVENLKKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTI 60
M + VLK++NL F I G R + +GVS I RGET LVGESG GK+ T I
Sbjct: 1 MNDWVLKIDNLSVGFGIAGQARPV-----TEGVSLTIARGETLALVGESGSGKSVTANAI 55
Query: 61 LRLIEP-----TDGKIIFMGKDVTKLKGEELKWFRR-KAQIMFQDPYSSLDPRQTVFQII 114
LRL+ G I F D + L+ R + ++FQ+P SL+P + + +
Sbjct: 56 LRLLPKGSAHYLSGSIHFGDVDTLRCSERALRGIRGGRIGMIFQEPMVSLNPLHKIGKQL 115
Query: 115 MEPVKFH-GIQVDDPEEFVIRLLESVGLN--EMHLYRYPHEFSGGQRQRIALARLLALKP 171
+E + H G++ E+ I L VG+ E+ + YPHE SGG+RQR+ +A L +P
Sbjct: 116 VETLAIHRGLRATAAEQKAIEWLGKVGIRHPEIKINAYPHELSGGERQRVMIAMALINEP 175
Query: 172 EFIVLDEPTSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKL 231
E ++ DEPT+ALDVSVQA IL+ LK LQ++ G LFI+HDL +V+ ++DR+ VM G+L
Sbjct: 176 ELLIADEPTTALDVSVQAQILDLLKSLQQELGMAMLFITHDLSIVRRIADRVAVMQSGQL 235
Query: 232 VEVGPADRIFENPLHPYTQMLFSA----IPIP 259
VE +F P HPYTQ L +A +P+P
Sbjct: 236 VETNACHTLFAAPAHPYTQQLINADPRGVPVP 267
>emb|CAC16447.1| (AL450165) putative oligopeptide ABC transporter ATP-binding
protein [Streptomyces coelicolor]
Length = 316
Score = 245 bits (620), Expect = 4e-64
Identities = 128/261 (49%), Positives = 168/261 (64%), Gaps = 16/261 (6%)
Query: 29 AVDGVSFEIKRGETFGLVGESGCGKTTTGRTILRLIEPTDGKIIFMGKDVTKLKGEELKW 88
AVD VS E++ GET LVGESGCGKTT R +L L+EPT G + F G+D+ L +L+
Sbjct: 43 AVDDVSLEVREGETMALVGESGCGKTTLTRLLLGLLEPTAGSVRFDGQDLAALTASQLRG 102
Query: 89 FRRKAQIMFQDPYSSLDPRQTVFQIIMEPVKFHGIQVDDPE-----------EFVIRLLE 137
RR+ Q++ QDPYSS++PR + I+ EP+ H DPE + V LLE
Sbjct: 103 VRRQMQVVLQDPYSSMNPRMRITDIVAEPLVTH-----DPEARGRRARARNRQRVGELLE 157
Query: 138 SVGLNEMHLYRYPHEFSGGQRQRIALARLLALKPEFIVLDEPTSALDVSVQANILNTLKE 197
+VGL+ RYPHEFSGGQRQR+++AR LAL P +VLDEPTSALDVSVQA +L+ L +
Sbjct: 158 AVGLDAGIQDRYPHEFSGGQRQRVSIARALALHPRLLVLDEPTSALDVSVQATVLDLLAD 217
Query: 198 LQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVGPADRIFENPLHPYTQMLFSAIP 257
LQ++ G TY+F+SH+L VV ++DR+ VM G LVEVG A + P HPYT+ L A+P
Sbjct: 218 LQQRLGLTYVFVSHNLAVVAQVADRVAVMSRGSLVEVGEAAAVLRTPRHPYTRQLLDAVP 277
Query: 258 IPDPDLAREMKKKRMKVTGEP 278
+ DP R + T P
Sbjct: 278 VLDPRRGRRAAARASAPTDGP 298
>sp|P77622|YDDO_ECOLI HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PROTEIN YDDO
>gi|7445738|pir||F64901 ABC-type transport protein b1483
- Escherichia coli >gi|1742423|dbj|BAA15138.1| (D90789)
Dipeptide transport ATP-binding protein DppF.
[Escherichia coli] >gi|1742434|dbj|BAA15148.1| (D90790)
Dipeptide transport ATP-binding protein DppF.
[Escherichia coli] >gi|1787758|gb|AAC74556.1| (AE000245)
putative ATP-binding component of a transport system
[Escherichia coli K12]
Length = 308
Score = 245 bits (618), Expect = 7e-64
Identities = 134/324 (41%), Positives = 197/324 (60%), Gaps = 22/324 (6%)
Query: 1 MTETVLKVENLKKYFPIRG--LFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGR 58
M++T+L + ++ FP R L +T V A++G+ +I+RGET G+VGESGCGK+T +
Sbjct: 1 MSDTLLTLRDVHINFPARKNWLGKTTEHVHAINGIDLQIRRGETLGIVGESGCGKSTLAQ 60
Query: 59 TILRLIEPTDGKIIFMGKDVTKLKGEELKWFRRKAQIMFQDPYSSLDPRQTVFQIIMEPV 118
++ +++P+ G+ I G +R Q++FQDP SSL+PR V++II EP+
Sbjct: 61 LLMGMLQPSHGQYIRSGS-------------QRIMQMVFQDPLSSLNPRLPVWRIITEPL 107
Query: 119 KFHGIQVDDPEEFVIR-LLESVGLNEMHLYRYPHEFSGGQRQRIALARLLALKPEFIVLD 177
+ + L VG+ +L R PH FSGGQRQRIA+AR L+ +P+ IVLD
Sbjct: 108 WIAKRSSEQQRRALAEELAVQVGIRPEYLDRLPHAFSGGQRQRIAIARALSSQPDVIVLD 167
Query: 178 EPTSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVGPA 237
EPTSALD+SVQA ILN L LQE HG TY+ ISH++ V+++MSDR+ VMYLG++VE+G A
Sbjct: 168 EPTSALDISVQAQILNLLVTLQENHGLTYVLISHNVSVIRHMSDRVAVMYLGQIVELGDA 227
Query: 238 DRIFENPLHPYTQMLFSAIPIPDPDLAREMKKKRMKVTGEPPSPINPPKGCRFHPRCPYA 297
++ P HPYT++L ++P D L E ++ + G P+GC F+ RCP A
Sbjct: 228 QQVLTAPAHPYTRLLLDSLPAIDKPLEEEWALRKTDLPGNR----TLPQGCFFYERCPLA 283
Query: 298 KAGLCDKEEPPMVEVEKDHYVACW 321
G C+ + + E + CW
Sbjct: 284 THG-CEVRQSLAIR-EDGRELRCW 305
>pir||T35983 probable peptide transport ATP-binding protein - Streptomyces
coelicolor >gi|4464268|emb|CAB37471.1| (AL035559)
putative peptide transport ATP-binding protein
[Streptomyces coelicolor A3(2)]
Length = 359
Score = 244 bits (617), Expect = 9e-64
Identities = 139/333 (41%), Positives = 187/333 (55%), Gaps = 25/333 (7%)
Query: 5 VLKVENLKKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTILRLI 64
+L V L FP R R +AVDGV +I+RGE LVGESGCGKTT R++L L+
Sbjct: 32 LLSVRGLHVTFPGR---RGAAAARAVDGVDLDIRRGEIVALVGESGCGKTTLARSLLGLV 88
Query: 65 EPTDGKIIFMGKDVTKLKGEELKWFRRKAQIMFQDPYSSLDPRQTVFQIIMEPVKFHGIQ 124
PT G++ F G + LK +RR+AQ++ QDP SL+PR TV+ I+ E ++ HG
Sbjct: 89 RPTGGRVTFDGAPLG-YSARALKAYRRRAQLVLQDPSGSLNPRHTVYDIVAEGLRIHG-H 146
Query: 125 VDDPEEFVIRLLESVGLN--EMHLYRYPHEFSGGQRQRIALARLLALKPEFIVLDEPTSA 182
D V L GL E RYPHE SGGQRQR+ +A L L+PE +V DEP ++
Sbjct: 147 AGDERTAVAEALSRAGLRPPERFFLRYPHELSGGQRQRVVIAGALVLQPELLVADEPVAS 206
Query: 183 LDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVGPADRIFE 242
LD SV+ IL L L+ + G + L ++HDLG+ ++DR+ VMYLG++VE G +++
Sbjct: 207 LDASVRGEILALLLRLRTELGLSALVVTHDLGLAWNIADRVAVMYLGRIVETGAVEQVLT 266
Query: 243 NPLHPYTQMLFSAIPIPDPDLAREMKKKRMKVTGEPPSPINPPKGCRFHPRCPYAKAG-- 300
P HPYTQ L S +P E + +TGEPP P P GCRFH RCP +G
Sbjct: 267 APRHPYTQALLSVLP--------EAPGAPVVLTGEPPDPSYIPGGCRFHVRCPVLASGEA 318
Query: 301 -------LCDKEEPPMVEVEKDHYVAC-WLYAK 325
C EE ++ + VAC W A+
Sbjct: 319 VRAGVADACRNEELEILRGGDESQVACHWARAE 351
>pir||A72371 oligopeptide ABC transporter, ATP-binding protein - Thermotoga
maritima (strain MSB8)
>gi|4981009|gb|AAD35583.1|AE001726_17 (AE001726)
oligopeptide ABC transporter, ATP-binding protein
[Thermotoga maritima]
Length = 333
Score = 244 bits (617), Expect = 9e-64
Identities = 136/327 (41%), Positives = 204/327 (61%), Gaps = 21/327 (6%)
Query: 4 TVLKVENLKKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTILRL 63
T+L+V+NL +F + G VKAV+ VSF + E G+VGE+G GK+ T ++I+RL
Sbjct: 6 TLLEVKNLSTWF-----YMEEGIVKAVNDVSFSLNSNEVLGIVGETGSGKSVTVKSIMRL 60
Query: 64 IEP----TDGKIIFMGKDVTKLKGEELKWFRRKAQIM-FQDPYSSLDPRQTVFQIIMEPV 118
I+P G+II+ G+D+ K+ +E+ R K M FQDP SL+P T+ +ME +
Sbjct: 61 IKPPGKIVSGEIIYKGQDILKIPEKEMHRIRGKEIAMIFQDPMMSLNPLYTIGDQLMETI 120
Query: 119 KFHGIQVDDPEEFV--IRLLESVGLNE--MHLYRYPHEFSGGQRQRIALARLLALKPEFI 174
++H + D ++ + +LE VG+ E + YP EFSGG RQR+ +A L+ P +
Sbjct: 121 RYH-LGYDKRRAYLRAVEMLELVGIPEPEKRMNNYPFEFSGGMRQRVVIAIALSCNPSVL 179
Query: 175 VLDEPTSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEV 234
+ DEPT+ALDV++QA IL +KELQ++ +FI+HDLGV+ M+DRI VMY G+ VE+
Sbjct: 180 IADEPTTALDVTIQAQILELMKELQKEFKTGLIFITHDLGVIASMADRIMVMYGGRQVEI 239
Query: 235 GPADRIFENPLHPYTQMLFSAIPIPDPDLAREMKKKRMKVTGEPPSPINPPKGCRFHPRC 294
G +D+IF +P HPYT+ML ++P D L +K + G+PP ++ P C F PRC
Sbjct: 240 GTSDQIFYSPRHPYTKMLLRSVPRVDKRL-----EKLESIPGQPPRMVDIPPVCPFLPRC 294
Query: 295 PYAKAGLCDKEEPPMVEVEKDHYVACW 321
P + C KE P + E+E++HYV C+
Sbjct: 295 P-RRVERCLKELPELSEIEENHYVRCF 320
>pir||D72289 oligopeptide ABC transporter, ATP-binding protein - Thermotoga
maritima (strain MSB8)
>gi|4981700|gb|AAD36228.1|AE001772_7 (AE001772)
oligopeptide ABC transporter, ATP-binding protein
[Thermotoga maritima]
Length = 323
Score = 244 bits (617), Expect = 9e-64
Identities = 132/303 (43%), Positives = 186/303 (60%), Gaps = 13/303 (4%)
Query: 27 VKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTILRLIEP---TDGKIIFMGKDVTKLKG 83
V AV+ VSF +++GET GLVGESGCGK+T G +I+RL+ DG I G D++ L
Sbjct: 20 VNAVENVSFHLEKGETLGLVGESGCGKSTLGFSIMRLLPKGTKIDGSIKIEGIDISSLSD 79
Query: 84 EELKWFR-RKAQIMFQDPYSSLDPRQTVFQIIMEPVKFHGIQV--DDPEEFVIRLLESVG 140
EE++ R K ++FQDP +SL+P + +E + H ++ +D E + LE VG
Sbjct: 80 EEMRQIRGSKVAMIFQDPMTSLNPILRIEDHFVEMILTHRPELSKEDARELAAKALEDVG 139
Query: 141 LNEMHLYRYPHEFSGGQRQRIALARLLALKPEFIVLDEPTSALDVSVQANILNTLKELQE 200
+N L YP +FSGG RQR+ +A + L P ++ DEPT++LDV VQA I+ L++L +
Sbjct: 140 INRNRLKDYPFQFSGGMRQRVMIALSIVLNPAVLIADEPTTSLDVIVQAQIMELLEKLTK 199
Query: 201 KHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVGPADRIFENPLHPYTQMLFSAIPIPD 260
+H + I+HD+G+V +DRIGVMY G LVE+ +RIF NPLHPYT L +IP D
Sbjct: 200 EHRTAMILITHDMGLVAEAADRIGVMYAGHLVELASKERIFTNPLHPYTVGLLRSIPNTD 259
Query: 261 PDLAREMKKKRMKVTGEPPSPINPPKGCRFHPRCPYAKAGLCDKEEPPMVEVEKDHYVAC 320
+ K+ + G PP NPP+GCRF PRC A +C ++EPP E++ V C
Sbjct: 260 VN-----DKELRYIPGSPPDLSNPPEGCRFAPRCEKAMK-ICWEKEPPEFEIDGTR-VKC 312
Query: 321 WLY 323
WLY
Sbjct: 313 WLY 315
>gb|AAF73093.1|AF103793_4 (AF103793) ATPase OppD [Listeria monocytogenes]
Length = 358
Score = 244 bits (616), Expect = 1e-63
Identities = 132/307 (42%), Positives = 196/307 (62%), Gaps = 15/307 (4%)
Query: 25 GWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTILRLI-----EPTDGKIIFMGKDVT 79
G VKA+ GV+F++ +GET +VGESG GK+ T ++I+RL+ E G+I+F G D+
Sbjct: 19 GEVKAIRGVNFDLYKGETLAIVGESGSGKSVTTKSIMRLLPEGNSEIKSGQILFNGMDIA 78
Query: 80 KLKGEELKWFRRK-AQIMFQDPYSSLDPRQTVFQIIMEP-VKFHGIQVDDPEEFVIRLLE 137
K ++++ R K ++FQDP +SL+P T+ + I EP +K I + + +RLL+
Sbjct: 79 KAHEKQMQKIRGKDIAMIFQDPMTSLNPTMTIGKQISEPLIKHQKISKHEAHKTALRLLQ 138
Query: 138 SVGLN--EMHLYRYPHEFSGGQRQRIALARLLALKPEFIVLDEPTSALDVSVQANILNTL 195
VG+ E + +YPH+FSGG RQR+ +A LA P+ ++ DEPT+ALDV++QA IL+ +
Sbjct: 139 LVGIANAEERIKQYPHQFSGGMRQRVVIAISLACNPQILIADEPTTALDVTIQAQILDLM 198
Query: 196 KELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVGPADRIFENPLHPYTQMLFSA 255
K+LQ+K + +FI+HDLGVV ++DR+ VMY GK+VE+G D IF NP HPYT L S+
Sbjct: 199 KDLQKKIDTSIIFITHDLGVVANVADRVAVMYGGKIVEIGTVDEIFYNPQHPYTWGLISS 258
Query: 256 IPIPDPDLAREMKKKRMKVTGEPPSPINPPKGCRFHPRCPYAKAGLCDKEEPPMVEVEKD 315
+P D D ++ + G PP ++PPKG F R YA + +EEPP+ +V
Sbjct: 259 MPTLDTD-----DEELFVIPGTPPDLLHPPKGDAFAARNKYAMQ-IDLEEEPPLFKVSDT 312
Query: 316 HYVACWL 322
HY A WL
Sbjct: 313 HYAATWL 319
>emb|CAA61526.1| (X89237) oligopeptidepermease [Streptococcus pyogenes]
Length = 307
Score = 242 bits (611), Expect = 5e-63
Identities = 136/294 (46%), Positives = 188/294 (63%), Gaps = 28/294 (9%)
Query: 29 AVDGVSFEIKRGETFGLVGESGCGKTTTGRTILRLIEPTDGKIIFMGKDVTKLKGE-ELK 87
AV +F IK+GETF LVGESG GKTT GR I+ L + + G+I++ GK + K + E
Sbjct: 24 AVKNANFFIKKGETFSLVGESGSGKTTIGRAIIGLNDTSSGQILYDGKVINGRKSKSEAN 83
Query: 88 WFRRKAQIMFQDPYSSLDPRQTVFQIIMEPV-KFHGIQVDDP-EEFVIRLLESVGLNEMH 145
RK Q++FQDP +SL+ R TV II E + F+ + ++ +E + ++ VGL H
Sbjct: 84 ELIRKIQMIFQDPAASLNERATVDYIISEGLYNFNLFKTEEERKEKIKNMMAEVGLLSEH 143
Query: 146 LYRYPHEFSGGQRQRIALARLLALKPEFIVLDEPTSALDVSVQANILNTLKELQEKHGFT 205
L RYPHEFSGGQRQRI +AR L + PEF++ DEP SALDVSV+A +LN LK +Q + G T
Sbjct: 144 LTRYPHEFSGGQRQRIGIARALVMNPEFVIADEPISALDVSVRAQVLNLLKRMQAEKGLT 203
Query: 206 YLFISHDLGVVKYMSDRIGVMYLGKLVEVGPADRIFENPLHPYTQMLFSAIPIPDPDLAR 265
YLFI+HDL VV+++SDRI V++ G +VEV + +F NP+HPYTQ L SA+PIPDP L R
Sbjct: 204 YLFIAHDLSVVRFISDRIAVIHKGVIVEVAETEELFNNPIHPYTQSLLSAVPIPDPILER 263
Query: 266 EMKKKRMKVTGEPPSPINPPKGCRFHP-RCPYAKAGLCDKEEPPMVEVEKDHYV 318
+ K + V +HP + Y ++P MVE++ +H+V
Sbjct: 264 Q---KELVV---------------YHPDQHDYT------LDKPSMVEIKPNHFV 293
>gb|AAG32327.1| (AF305548) oligopeptide permease [Streptococcus pyogenes]
Length = 307
Score = 242 bits (611), Expect = 5e-63
Identities = 136/294 (46%), Positives = 188/294 (63%), Gaps = 28/294 (9%)
Query: 29 AVDGVSFEIKRGETFGLVGESGCGKTTTGRTILRLIEPTDGKIIFMGKDVTKLKGE-ELK 87
AV +F IK+GETF LVGESG GKTT GR I+ L + + G+I++ GK + K + E
Sbjct: 24 AVKNANFFIKKGETFSLVGESGSGKTTIGRAIIGLNDTSSGQILYDGKVINGRKSKSEAN 83
Query: 88 WFRRKAQIMFQDPYSSLDPRQTVFQIIMEPV-KFHGIQVDDP-EEFVIRLLESVGLNEMH 145
RK Q++FQDP +SL+ R TV II E + F+ + ++ +E + ++ VGL H
Sbjct: 84 ELIRKIQMIFQDPAASLNERATVDYIISEGLYNFNLFKTEEERKEKIKNMMAEVGLLSEH 143
Query: 146 LYRYPHEFSGGQRQRIALARLLALKPEFIVLDEPTSALDVSVQANILNTLKELQEKHGFT 205
L RYPHEFSGGQRQRI +AR L + PEF++ DEP SALDVSV+A +LN LK +Q + G T
Sbjct: 144 LTRYPHEFSGGQRQRIGIARALVMNPEFVIADEPISALDVSVRAQVLNLLKRMQAEKGLT 203
Query: 206 YLFISHDLGVVKYMSDRIGVMYLGKLVEVGPADRIFENPLHPYTQMLFSAIPIPDPDLAR 265
YLFI+HDL VV+++SDRI V++ G +VEV + +F NP+HPYTQ L SA+PIPDP L R
Sbjct: 204 YLFIAHDLSVVRFISDRIAVIHKGVIVEVAETEELFNNPIHPYTQSLLSAVPIPDPILER 263
Query: 266 EMKKKRMKVTGEPPSPINPPKGCRFHP-RCPYAKAGLCDKEEPPMVEVEKDHYV 318
+ K + V +HP + Y ++P MVE++ +H+V
Sbjct: 264 Q---KELVV---------------YHPDQHDYT------LDKPSMVEIKPNHFV 293
>pir||F72617 probable dipeptide transport system ATP-binding protein APE1399 -
Aeropyrum pernix (strain K1) >gi|5105082|dbj|BAA80396.1|
(AP000061) 333aa long hypothetical dipeptide transport
system ATP-binding protein [Aeropyrum pernix]
Length = 333
Score = 240 bits (605), Expect = 2e-62
Identities = 140/339 (41%), Positives = 201/339 (58%), Gaps = 27/339 (7%)
Query: 3 ETVLKVENLKKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTILR 62
+ +++VENLK YF + G VKA++ VSF I RGET+ LVGE+GCGK+ T R + R
Sbjct: 7 DPIIEVENLKVYF-----YTYAGIVKAIEDVSFRICRGETYCLVGETGCGKSVTSRALTR 61
Query: 63 LIEP----TDGKIIFMGK-----DVTKLKGEELKWFR-RKAQIMFQDPYSSLDPRQTVFQ 112
LI P +GKI + + D+ L +EL+ R + +FQDP ++LDP T+
Sbjct: 62 LIYPPGRIVEGKIYYYPEPGRRVDIMSLDEKELRRIRGEEIAYIFQDPSAALDPLYTIGY 121
Query: 113 IIMEPVKFHGIQVDDPEEFVIR---LLESVGLN--EMHLYRYPHEFSGGQRQRIALARLL 167
+ E + HG +V E V R +L++V + E + YPHE SGG +QR + L
Sbjct: 122 QVGETMLAHG-RVRSLREGVRRAVGVLKTVLMPDPEKRVKSYPHELSGGMKQRGVIGISL 180
Query: 168 ALKPEFIVLDEPTSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMY 227
+ +P+ ++ DEPT+ALDV++QA I++ L +L+ +HG T L I+H+LG+V DR+ VMY
Sbjct: 181 SNRPKLLIADEPTTALDVTIQAQIMDLLTQLKREHGLTLLLITHNLGLVAEYCDRVAVMY 240
Query: 228 LGKLVEVGPADRIFENPLHPYTQMLFSAIPIPDPDLAREMKKKRMKVTGEPPSPINPPKG 287
G +VE P D +F NPLHPYT+ L A+P P LA+ + + G P+ I PP G
Sbjct: 241 AGNIVEEAPVDELFSNPLHPYTRALIRAVPNP---LAKIENLEH--IPGTVPNLITPPPG 295
Query: 288 CRFHPRCPYAKAGLCDKEEPPMVEVEKDHYVACWLYAKA 326
CRFHPRCP A C +E+P + E H ACW K+
Sbjct: 296 CRFHPRCPLA-FDRCSREKPLLKEYSPGHKAACWALEKS 333
>gi|10955083 agaD [Agrobacterium tumefaciens] >gi|11346288|pir||T45532 agaD
protein [imported] - Agrobacterium tumefaciens plasmid
pTi15955 >gi|2665708|gb|AAB88468.1| (AF242881) agaD
[Agrobacterium tumefaciens]
Length = 569
Score = 239 bits (604), Expect = 3e-62
Identities = 125/256 (48%), Positives = 171/256 (65%), Gaps = 2/256 (0%)
Query: 3 ETVLKVENLKKYFPIR-GLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTIL 61
+T+L + NL K F +R +AVD VS +I T GLVGESGCGK+T R ++
Sbjct: 302 QTLLTIRNLTKTFWLRESPLAPPKEFRAVDDVSLDIPARSTVGLVGESGCGKSTLSRLVM 361
Query: 62 RLIEPTDGKIIFMGKDVTKLKGEELKWFRRKAQIMFQDPYSSLDPRQTVFQIIMEPVKFH 121
RL+EP G I F G D+T L E L+ R+ ++FQ+PY SL+PRQTV +I PV H
Sbjct: 362 RLMEPNSGTIEFDGIDLTSLDRERLRHARQNFALVFQNPYGSLNPRQTVTDLIAAPVDIH 421
Query: 122 GIQVDDPEEFVIRLLESVGLNEMHLYRYPHEFSGGQRQRIALARLLALKPEFIVLDEPTS 181
+ D E V +LL++VGL + RYPHEFSGGQRQRI +AR LAL+P+ ++ DE S
Sbjct: 422 A-KGRDREAIVAKLLDAVGLPRDAMRRYPHEFSGGQRQRIVIARALALRPKLLICDEAVS 480
Query: 182 ALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVGPADRIF 241
ALDVSVQA +LN L++LQ++ TYLFI+HD+ VV+++SD I VM G++VE G A+ +F
Sbjct: 481 ALDVSVQAQVLNLLQDLQDEFDLTYLFITHDMSVVRHISDTIAVMQKGRIVETGTAEEVF 540
Query: 242 ENPLHPYTQMLFSAIP 257
++P YT+ L A+P
Sbjct: 541 DHPKDEYTRTLLRAVP 556
Score = 162 bits (407), Expect = 4e-39
Identities = 103/284 (36%), Positives = 155/284 (54%), Gaps = 19/284 (6%)
Query: 5 VLKVENLKKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTILRLI 64
VLK++NL F RT AV+ VS + GE GLVGESG GKT + L+
Sbjct: 6 VLKIDNLTVAFKTGDGLRT-----AVNSVSLSLHSGEILGLVGESGSGKTILSLAAMGLL 60
Query: 65 EPT----DGKIIFMGKDVTKLKGEELKWFR-RKAQIMFQDPYSSLDPRQTVFQIIMEPVK 119
P G + F G+D+ + + L+ R ++ ++FQDP +SLDP T I+E +
Sbjct: 61 PPNAVVAGGTVKFFGEDLLTARPDVLRKLRGKRIAMIFQDPMASLDPVFTCGSQIVESIL 120
Query: 120 FHG-IQVDDPEEFVIRLLESVGL--NEMHLYRYPHEFSGGQRQRIALARLLALKPEFIVL 176
H + + + + LL VG+ E + YPHE SGGQ QR+ +A +A KP+ I+
Sbjct: 121 LHERVPRRNAHQRALDLLTKVGIVDPERCMGSYPHELSGGQCQRVMIAMAVACKPDVIIA 180
Query: 177 DEPTSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVGP 236
DEPT+ALDV+VQ +LN L+ L ++ G L I+HDLGV+ ++DR+ V+Y G ++E
Sbjct: 181 DEPTTALDVTVQKQVLNLLQNLNQEIGAAILLITHDLGVIYEVADRVAVIYRGDMMEEAK 240
Query: 237 ADRIFENPLHPYTQMLFSAIPIPDPDLAREMKKKRMKVTGEPPS 280
+F P YT+ L +++P + K R+ V G+ S
Sbjct: 241 TTDLFAAPKSAYTKALIASMP------SVSTPKTRLPVIGKDES 278
>pir||F72428 oligopeptide ABC transporter, ATP-binding protein - Thermotoga
maritima (strain MSB8)
>gi|4980512|gb|AAD35122.1|AE001690_16 (AE001690)
oligopeptide ABC transporter, ATP-binding protein
[Thermotoga maritima]
Length = 330
Score = 238 bits (602), Expect = 5e-62
Identities = 133/336 (39%), Positives = 203/336 (59%), Gaps = 24/336 (7%)
Query: 1 MTETVLKVENLKKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTI 60
M E +LK EN++ Y+ + + VKAVDG+SFEI E G+VGESGCGKTT I
Sbjct: 1 MKEILLKAENVRAYYKLEKVS-----VKAVDGLSFEILEDEVIGVVGESGCGKTTLSNVI 55
Query: 61 -LRLIEP---TDGKIIFMGK----DVTKLKGEELK--WFRRKAQIMFQDPYSSLDPRQTV 110
+ +++P DGKI +++ + +E+K ++ ++ I+ Q ++L P +
Sbjct: 56 FMNMVKPLTLVDGKIFLRVNGEFVELSSMTRDEVKRKFWGKEITIIPQAAMNALMPTIRM 115
Query: 111 FQIIMEPVKFHGIQVDDPEEFVIRLLESVGLNEMHLYRYPHEFSGGQRQRIALARLLALK 170
+ + + HGI ++ + R E VGL+ + + RYP E SGG RQR +A L
Sbjct: 116 EKYVRHLAESHGIDEEELLDKARRRFEEVGLDPLWIKRYPFELSGGMRQRAVIAIATILN 175
Query: 171 PEFIVLDEPTSALDVSVQANILNTLKELQEKHGF--TYLFISHDLGVVKYMSDRIGVMYL 228
P ++ DEPTSALDV Q +L L +++ + G + +FI+HD+ V+ ++DR+ +MY
Sbjct: 176 PSLLIADEPTSALDVVNQKVLLKVLMQMK-RQGIVKSIIFITHDIATVRQIADRMIIMYA 234
Query: 229 GKLVEVGPADRIFENPLHPYTQMLFSAIPIPDPDLAREMKKKRM-KVTGEPPSPINPPKG 287
GK+VE P + + E PLHPYTQ LF+++ P+P E+KK+ + + G PP+ INPP G
Sbjct: 235 GKIVEFAPVESLLEKPLHPYTQGLFNSVLTPEP----EVKKRGITTIPGAPPNLINPPSG 290
Query: 288 CRFHPRCPYAKAGLCDKEEPPMVEVEKDHYVACWLY 323
CRFHPRCP+A +C ++EPP+ E+E VACWLY
Sbjct: 291 CRFHPRCPHA-MDVCKEKEPPLTEIEPGRRVACWLY 325
>dbj|BAB03747.1| (AP001507) oligopeptide ABC transporter (ATP-binding protein)
[Bacillus halodurans]
Length = 347
Score = 236 bits (596), Expect = 3e-61
Identities = 133/331 (40%), Positives = 202/331 (60%), Gaps = 17/331 (5%)
Query: 3 ETVLKVENLKKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTILR 62
ET+L+V +L+ F F VKAVDGV+F + +G+T G+VGESG GK+ T +IL+
Sbjct: 10 ETILEVRDLRTSF-----FTEAFEVKAVDGVTFSVPKGKTLGIVGESGSGKSITSLSILK 64
Query: 63 LIEP----TDGKIIFMGKD-VTKLKGEELKWFRRKAQIMFQDPYSSLDPRQTVFQIIMEP 117
LI+ G+I F G++ VTK + K + ++FQ+P +SL+P TV Q I E
Sbjct: 65 LIQEPGKVVGGEINFKGENLVTKNEAYMRKIRGNEISMIFQEPMTSLNPVYTVGQQISES 124
Query: 118 VKFHG-IQVDDPEEFVIRLLESVGLN--EMHLYRYPHEFSGGQRQRIALARLLALKPEFI 174
+ H + + + + +L+ VG+ E +++YPHE SGG RQR+ +A LA PE +
Sbjct: 125 FRIHEKLGKKEALKRSVDMLKLVGIPSPEKRVHQYPHELSGGMRQRVMIAMALACNPELL 184
Query: 175 VLDEPTSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEV 234
+ DEPT+ALDV++QA IL +K+LQ++ G + + I+HDLGVV D + VMY GK+VE
Sbjct: 185 IADEPTTALDVTIQAQILELMKDLQDRLGMSIIMITHDLGVVAETCDYVAVMYCGKVVEY 244
Query: 235 GPADRIFENPLHPYTQMLFSAIPIPDPDLAREMKKKRMKVTGEPPSPINPPKGCRFHPRC 294
+F+NP HPYT L +++P D DL E + + G PSP + P+GCRF PRC
Sbjct: 245 ADVKTLFKNPRHPYTVGLLNSLPRHDIDLEDE---ELSVIKGNVPSPADMPEGCRFAPRC 301
Query: 295 PYAKAGLCDKEEPPMVEVEKDHYVACWLYAK 325
P+A + +C + P + E + + CW+Y++
Sbjct: 302 PFA-SDICKERLPDLETDENGNQIRCWVYSE 331
>dbj|BAA03322.1| (D14438) ATP-binding protein [Synechococcus elongatus]
Length = 531
Score = 236 bits (595), Expect = 3e-61
Identities = 114/254 (44%), Positives = 171/254 (66%), Gaps = 3/254 (1%)
Query: 5 VLKVENLKKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTILRLI 64
+L+VENL++++ + G + ++AVDGV ++RGET GLVGESGCGK+T R IL+LI
Sbjct: 275 LLRVENLQRHYRLGGWLQPQTTIRAVDGVDLTLRRGETLGLVGESGCGKSTLSRLILQLI 334
Query: 65 EPTDGKIIFMGKDVTKLKGEELKWFRRKAQIMFQDPYSSLDPRQTVFQIIMEPVKFHGIQ 124
G ++F+G+ +T+L +L+ RR Q++FQDP++ L+P+ TV Q ++EP+ H +
Sbjct: 335 PANAGDVVFLGRSLTQLSAAQLRRTRRDLQMIFQDPHACLNPKMTVAQNLLEPLLIHRLM 394
Query: 125 VDDP-EEFVIRLLESVGLN--EMHLYRYPHEFSGGQRQRIALARLLALKPEFIVLDEPTS 181
+E V +L V L E +L+RYPH SGGQRQR+A+AR L P+ ++ DEP S
Sbjct: 395 AKRAAQERVREMLMQVELTPAEAYLHRYPHALSGGQRQRVAIARALITHPQLVICDEPVS 454
Query: 182 ALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVGPADRIF 241
LD +QA +L ++EL+E+ TYLFI+HDL + + DR+ VMY GK+VE+ P ++F
Sbjct: 455 MLDAHIQAQVLALMQELKEQLQLTYLFITHDLAIARRFCDRVAVMYRGKIVELAPTAQLF 514
Query: 242 ENPLHPYTQMLFSA 255
+P HPYTQ L +A
Sbjct: 515 AHPQHPYTQKLLAA 528
Score = 185 bits (465), Expect = 6e-46
Identities = 104/264 (39%), Positives = 155/264 (58%), Gaps = 8/264 (3%)
Query: 4 TVLKVENLKKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTILRL 63
T+L++ L+ +P +V VDGVSF + GE FGLVG SGCGK+T G+ ILRL
Sbjct: 3 TLLELRELRVAYPRMETSSAATFV--VDGVSFCVAAGERFGLVGASGCGKSTIGKAILRL 60
Query: 64 IEPTD---GKIIFMGKDVTKLKGEELKWFR-RKAQIMFQDPYSSLDPRQTVFQIIMEPVK 119
+ P G+I G+ + L +L+ R + ++FQDP + L+P +++ E ++
Sbjct: 61 LPPGSQIFGQIALQGQSLLGLSASQLQRLRGEQIGLVFQDPMTRLNPLMSIYDHCDELLR 120
Query: 120 FHGIQVDDPE--EFVIRLLESVGLNEMHLYRYPHEFSGGQRQRIALARLLALKPEFIVLD 177
H P+ + +I +LE V + L++YPHE SGG RQR+A+A L L P I+ D
Sbjct: 121 SHWFSWSRPQRRQRIIEVLERVKIPANRLHQYPHELSGGMRQRVAIALALLLNPPLIIAD 180
Query: 178 EPTSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVGPA 237
EPT+ALDV+V A IL L L ++ L ISHDL ++ DR+ VM+ GK++E+G A
Sbjct: 181 EPTTALDVTVAAEILEELTRLCQQEQRGLLLISHDLALMAKYCDRLAVMHQGKIMELGAA 240
Query: 238 DRIFENPLHPYTQMLFSAIPIPDP 261
++ + P HPYTQ L +A + P
Sbjct: 241 HQVLQRPQHPYTQSLLAATQLTSP 264
>sp|P26905|DPPD_BACSU DIPEPTIDE TRANSPORT ATP-BINDING PROTEIN DPPD >gi|98274|pir||S16650
dipeptide transport ATP-binding protein dppD - Bacillus
subtilis >gi|48807|emb|CAA40005.1| (X56678) dciAD
[Bacillus subtilis] >gi|2632016|emb|CAA05575.1|
(AJ002571) DppD [Bacillus subtilis]
>gi|2633649|emb|CAB13152.1| (Z99110) dipeptide ABC
transporter (ATP-binding protein) [Bacillus subtilis]
Length = 335
Score = 235 bits (593), Expect = 6e-61
Identities = 133/329 (40%), Positives = 193/329 (58%), Gaps = 20/329 (6%)
Query: 3 ETVLKVENLKKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTILR 62
E VL V+NL F G G V+AV GVSF++ +GETF +VGESGCGK+ T ++I+
Sbjct: 2 EKVLSVQNLHVSFTTYG-----GTVQAVRGVSFDLYKGETFAIVGESGCGKSVTSQSIMG 56
Query: 63 LIEP-----TDGKIIFMGKDVTKLKGEELKWFR-RKAQIMFQDPYSSLDPRQTVFQIIME 116
L+ P TDG+I+F KD+ +L +E++ R ++FQDP ++L+P TV + E
Sbjct: 57 LLPPYSAKVTDGRILFKNKDLCRLSDKEMRGIRGADISMIFQDPMTALNPTLTVGDQLGE 116
Query: 117 PVKFHG-IQVDDPEEFVIRLLESVGLNEM--HLYRYPHEFSGGQRQRIALARLLALKPEF 173
+ H + + V+ +L VG+ + L +YPH+FSGG RQRI +A L +P+
Sbjct: 117 ALLRHKKMSKKAARKEVLSMLSLVGIPDPGERLKQYPHQFSGGMRQRIVIAMALICEPDI 176
Query: 174 IVLDEPTSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVE 233
++ DEPT+ALDV++QA IL KE+Q K + + I+HDLGVV ++DR+ VMY GK+ E
Sbjct: 177 LIADEPTTALDVTIQAQILELFKEIQRKTDVSVILITHDLGVVAQVADRVAVMYAGKMAE 236
Query: 234 VGPADRIFENPLHPYTQMLFSAIPIPDPDLAREMKKKRMKVTGEPPSPINPPKGCRFHPR 293
+G IF P HPYT+ L ++P D + A + + G PP +PP GC F R
Sbjct: 237 IGTRKDIFYQPQHPYTKGLLGSVPRLDLNGA-----ELTPIDGTPPDLFSPPPGCPFAAR 291
Query: 294 CPYAKAGLCDKEEPPMVEVEKDHYVACWL 322
CP + +CD+ P H V CWL
Sbjct: 292 CP-NRMVVCDRVYPGQTIRSDSHTVNCWL 319
>pir||B83389 probable ATP-binding component of ABC transporter PA2061 [imported]
- Pseudomonas aeruginosa (strain PAO1)
>gi|9948069|gb|AAG05449.1|AE004632_8 (AE004632) probable
ATP-binding component of ABC transporter [Pseudomonas
aeruginosa]
Length = 536
Score = 235 bits (593), Expect = 6e-61
Identities = 129/258 (50%), Positives = 173/258 (67%), Gaps = 5/258 (1%)
Query: 3 ETVLKVENLKKYFPIRG--LFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTI 60
ET L+V L +P G L R G ++AV VS ++RG T G+VGESG GK++ G+ +
Sbjct: 266 ETCLEVRALSLDYPAPGGWLRRRAG-LRAVHEVSLRLRRGSTLGIVGESGSGKSSLGQAL 324
Query: 61 LRLIEPTDGKIIFMGKDVTKLKGEELKWFRRKAQIMFQDPYSSLDPRQTVFQIIMEPVKF 120
LRL+ P +G+I+F G+ + +L G+ L RR+ Q +FQDPY SL+PR +V QI+ E ++
Sbjct: 325 LRLL-PAEGQILFQGERLDRLHGKRLLPLRRQFQAVFQDPYGSLNPRLSVEQIVGEGLRI 383
Query: 121 HGI-QVDDPEEFVIRLLESVGLNEMHLYRYPHEFSGGQRQRIALARLLALKPEFIVLDEP 179
HGI + V+ L VGL+E L RYPHEFSGGQRQRIA+AR L LKP I+LDEP
Sbjct: 384 HGIGDAGERRARVLEALREVGLDEPCLERYPHEFSGGQRQRIAIARTLVLKPALILLDEP 443
Query: 180 TSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVGPADR 239
TSALD SVQ ++ L+ LQ +HG +YLFISHDL VV+ ++ I V+ G++VE G A
Sbjct: 444 TSALDRSVQCQVVELLRRLQRRHGLSYLFISHDLAVVRALAHDILVLKDGRVVEQGSAAA 503
Query: 240 IFENPLHPYTQMLFSAIP 257
+F P HPYT+ L AIP
Sbjct: 504 LFSQPRHPYTRELLGAIP 521
Score = 171 bits (430), Expect = 8e-42
Identities = 104/290 (35%), Positives = 165/290 (56%), Gaps = 18/290 (6%)
Query: 1 MTETVLKVENLKKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTI 60
M +L+VENL + G + V G+ F ++ GET LVGESG GK+ T +
Sbjct: 1 MNRELLRVENLSVAY---------GDTQVVKGIDFSLRAGETLALVGESGSGKSQTAHAL 51
Query: 61 LRLIEPT---DGKIIFMGKDVTKLKGEELKWFR-RKAQIMFQDPYSSLDPRQTVFQIIME 116
LRL+ G + G+++ L + L R ++ ++FQ+P +SL+P Q + + + E
Sbjct: 52 LRLLPGAARLGGSVRLDGEELLALSPQALLAIRGQRIGMVFQEPMTSLNPLQRIGRQVGE 111
Query: 117 PVKFHG-IQVDDPEEFVIRLLESVGLNEMH--LYRYPHEFSGGQRQRIALARLLALKPEF 173
++ H ++ V+ LLE GL + L YPH+ SGGQRQR+ LA LA +P+
Sbjct: 112 GLRLHRRLRGAALRGRVLELLELAGLEQPRRLLEAYPHQLSGGQRQRVMLAMALACEPQL 171
Query: 174 IVLDEPTSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVE 233
++ DEPT+ALDV+VQ +L L+ LQ + G L ISHDL +V+ ++DR+ VM G++VE
Sbjct: 172 LIADEPTTALDVTVQKRLLELLQSLQRRLGMAILLISHDLNLVRRVADRVCVMRDGQIVE 231
Query: 234 VGPADRIFENPLHPYTQMLFSAIP--IPDPDLAREMKKKRMKVTGEPPSP 281
+ +F +P HPYT++L A P + +P RE + ++ + P+P
Sbjct: 232 ENACETLFRSPRHPYTRLLIEAEPGGLAEPVACRETCLEVRALSLDYPAP 281
>gb|AAK41513.1| Oligo/dipeptide transport, ATP binding protein (dppD-1) [Sulfolobus
solfataricus]
Length = 316
Score = 234 bits (591), Expect = 1e-60
Identities = 133/327 (40%), Positives = 193/327 (58%), Gaps = 24/327 (7%)
Query: 5 VLKVENLKKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTILRLI 64
+L+V NLK YF + G VKAVDGV+ + +GE GL GESG GK+T G I+RL+
Sbjct: 6 LLEVRNLKVYF-----YTKRGIVKAVDGVNLYLDKGEIVGLAGESGSGKSTIGYAIMRLV 60
Query: 65 ----EPTDGKIIFMGKDVTKLKGEELK----WFRRKAQIMFQDPYSSLDPRQTVFQIIME 116
+ G+I+F G+++ KL E + W +K ++FQ S P + I+E
Sbjct: 61 PFPGKIESGEILFKGENILKLDEEAFRKNYRW--KKIAMVFQGSMSGFTPVFKIKDQIIE 118
Query: 117 PVKFHGIQVDDPEEFVIRLLESVGLNEMHLYRYPHEFSGGQRQRIALARLLALKPEFIVL 176
++ HG D EE + L + V ++ +YPHE SGGQ+QR +A LAL PE ++
Sbjct: 119 VLRIHGWN-GDYEERIKELFKMVNMDPQLAEKYPHELSGGQKQRAFIAMALALNPEVLIA 177
Query: 177 DEPTSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVGP 236
DEPT+ALDV VQ +ILN LK+L+++ + +FI+HDL ++ +SDR +Y GK++E GP
Sbjct: 178 DEPTTALDVMVQEHILNLLKKLRKELNLSIIFITHDLALLSEISDRDYTLYAGKVMESGP 237
Query: 237 ADRIFENPLHPYTQMLFSAIPIPDPDLAREMKKKRMKVTGEPPSPINPPKGCRFHPRCPY 296
++ IF+ P HPYT +L +I D D+ + + G P +PP GCRF+ RCP+
Sbjct: 238 SEVIFKKPRHPYTSLLIESIATLDKDIIK-------GIPGAMPDLSSPPLGCRFNTRCPF 290
Query: 297 AKAGLCDKEEPPMVEVEKDHYVACWLY 323
A+ +C KEEP M VACWLY
Sbjct: 291 AR-DICFKEEPKMKTFSDGDEVACWLY 316
>pir||S75333 oligopeptide transport protein oppF - Synechocystis sp. (strain
PCC 6803) >gi|1652324|dbj|BAA17247.1| (D90904)
oligopeptide transport ATP-binding protein OppF
[Synechocystis sp.]
Length = 650
Score = 234 bits (591), Expect = 1e-60
Identities = 130/258 (50%), Positives = 167/258 (64%), Gaps = 5/258 (1%)
Query: 5 VLKVENLKKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTILRLI 64
+L+V+NL + GLF KAV+ VSF++ GET GLVGESGCGK+T R +LRL
Sbjct: 381 LLEVQNLTVSYGQGGLFGKKSVFKAVNDVSFQVYPGETLGLVGESGCGKSTLARALLRLT 440
Query: 65 EPTDGKIIFMGKDVTKLKGEELKW--FRRKAQIMFQDPYSSLDPRQTVFQIIMEPVKFHG 122
G+IIF G++V L + +W RR+ QI+FQ+PY+SL+PR T+ + I EP+ H
Sbjct: 441 PIQTGRIIFDGQNVAALPEKSQQWRRLRREMQIIFQNPYNSLNPRMTIGRAIQEPLIIHE 500
Query: 123 IQVDDPEEF--VIRLLESVGLNEMHLYRYPHEFSGGQRQRIALARLLALKPEFIVLDEPT 180
+ ++ V LLE VG++ RYPHE SGGQRQRI +AR LAL P FI+ DE
Sbjct: 501 PKQSTKQQRQRVAELLERVGISPQWFNRYPHELSGGQRQRICIARALALNPRFIICDESV 560
Query: 181 SALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVE-VGPADR 239
SALDVSVQA +LN LKELQ TY+FISHDL VV++M DRI VM G+L E + A
Sbjct: 561 SALDVSVQAQVLNLLKELQRDLQLTYIFISHDLSVVRFMGDRIMVMNRGQLAEPINTAQE 620
Query: 240 IFENPLHPYTQMLFSAIP 257
I ENP YT+ L +IP
Sbjct: 621 IIENPQSAYTKKLIQSIP 638
Score = 159 bits (397), Expect = 6e-38
Identities = 110/361 (30%), Positives = 180/361 (49%), Gaps = 57/361 (15%)
Query: 1 MTETVLKVENLKKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTI 60
M + +L V L+ FP T + AV GV FE++RGE G+VGESG GK+ T I
Sbjct: 34 MNDLILAVRQLEIAFPDAD---TREKLLAVKGVDFELERGEILGIVGESGSGKSVTSLGI 90
Query: 61 LRLI------EPTDGKIIFMGKDVTKL------KGEELKWFRRKAQIMFQDPYSSLDPRQ 108
+ L+ EP+ F + + +G++ ++ K ++FQ+P SSL+P
Sbjct: 91 MGLVPKPGWVEPSSEIDFFAQAQSSPVNLVALPEGDKRQYRGGKIAMIFQEPMSSLNPVY 150
Query: 109 TVFQIIMEPVKFH-GIQVDDPEEFVIRLLESVGL-------------------------- 141
T+ I+E ++ H + ++ + I LL+ V +
Sbjct: 151 TIGFQIIEAIRLHQNVTQEEAQNQAIALLQEVRVLPKDEVLEEEFLAQEQAQPRGKVTQN 210
Query: 142 --------NEMHLYRYPHEFSGGQRQRIALARLLALKPEFIVLDEPTSALDVSVQANILN 193
+ L RYPHE SGGQ QR+ +A ++ P ++ DEPT+ALDV+VQA IL
Sbjct: 211 LASYIQQRKQSFLKRYPHELSGGQLQRVMIAMAISANPRLLIADEPTTALDVTVQAEILR 270
Query: 194 TLKELQEKH-GFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVGPADRIFENPLHPYTQML 252
L++L ++H + +FISHDLGV+ ++DR+ VMY G++VE G ++I +P HPYT+ L
Sbjct: 271 LLRDLCKQHQEMSLIFISHDLGVINEIADRVAVMYRGEIVEQGLKEQILHSPQHPYTKGL 330
Query: 253 FSAIPIPDPDLAREMKKKRMKVTGEPPSPINPPKGCRFHPRCPYAKAGLCDKEEPPMVEV 312
+ P E++ + G+ + PP + + + +PP++EV
Sbjct: 331 LACRP------RLEIQLDHLPTVGDFLNADGPPPSYQVITPAQESDRLAQLQAKPPLLEV 384
Query: 313 E 313
+
Sbjct: 385 Q 385
>pir||F64557 dipeptide transport ATP-binding protein dppF - Helicobacter pylori
(strain 26695) >gi|2313400|gb|AAD07371.1| (AE000548)
dipeptide ABC transporter, ATP-binding protein (dppF)
[Helicobacter pylori 26695]
Length = 268
Score = 233 bits (588), Expect = 2e-60
Identities = 119/266 (44%), Positives = 175/266 (65%), Gaps = 2/266 (0%)
Query: 5 VLKVENLKKYFPI-RGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTILRL 63
+L+++ LKK + I RGLF+ + A++G+SFE+++ E +VGESGCGK+TT + + +
Sbjct: 3 LLEIKELKKSYAIDRGLFKPKRVIHALNGISFEVEQNEVLSIVGESGCGKSTTAKILAGI 62
Query: 64 IEPTDGKIIFMGKDVTKLKGEELKWFRRKAQIMFQDPYSSLDPRQTVFQIIMEPVKFHG- 122
G I F GK ++ +R+K Q++FQDPYSSL+PR V +II EP+ +
Sbjct: 63 ERQDSGAIYFNGKRHLHFSKQDWFDYRKKVQMIFQDPYSSLNPRWKVGEIIAEPLLLNSH 122
Query: 123 IQVDDPEEFVIRLLESVGLNEMHLYRYPHEFSGGQRQRIALARLLALKPEFIVLDEPTSA 182
+ + V+ +++ VGL + RYPH+FSGGQRQRI +AR L L P ++ DEP SA
Sbjct: 123 FSKKEIKTKVLEIMQKVGLKLEWIDRYPHQFSGGQRQRIGIARALILHPSVVICDEPVSA 182
Query: 183 LDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVGPADRIFE 242
LDVS+QA +LN L +LQ++ G TY+FISHDLGVV+++SD+I VM G++VE G D +
Sbjct: 183 LDVSIQAQVLNLLLDLQKEMGLTYIFISHDLGVVEHISDKIIVMNQGQIVETGDVDSVIS 242
Query: 243 NPLHPYTQMLFSAIPIPDPDLAREMK 268
P HPYTQ L +A+P + + R K
Sbjct: 243 APKHPYTQKLLNAVPHLEKSMQRFAK 268
>pir||A71952 dipeptide transport system ATP-binding protein - Helicobacter
pylori (strain J99) >gi|4154801|gb|AAD05857.1|
(AE001465) DIPEPTIDE TRANSPORT SYSTEM ATP-BINDING
PROTEIN [Helicobacter pylori J99]
Length = 268
Score = 233 bits (587), Expect = 3e-60
Identities = 118/263 (44%), Positives = 174/263 (65%), Gaps = 2/263 (0%)
Query: 5 VLKVENLKKYFPI-RGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTILRL 63
+L+++ LKK + I RGLF+ + A++G+SFE+++ E +VGESGCGK+TT + + +
Sbjct: 3 LLEIKELKKSYAIDRGLFKPKRVIHALNGISFEVEQNEVLSIVGESGCGKSTTAKILAGI 62
Query: 64 IEPTDGKIIFMGKDVTKLKGEELKWFRRKAQIMFQDPYSSLDPRQTVFQIIMEPVKFHG- 122
G I F GK ++ +R+K Q++FQDPYSSL+PR V +II EP+ +
Sbjct: 63 ERQDSGAIYFNGKRHLHFSKQDWFDYRKKVQMIFQDPYSSLNPRWKVGEIIAEPLLLNSH 122
Query: 123 IQVDDPEEFVIRLLESVGLNEMHLYRYPHEFSGGQRQRIALARLLALKPEFIVLDEPTSA 182
+ + V+ +++ VGL + RYPH+FSGGQRQRI +AR L L P ++ DEP SA
Sbjct: 123 FSKKEIKTKVLEIMQKVGLKLEWIDRYPHQFSGGQRQRIGIARALILHPSVVICDEPVSA 182
Query: 183 LDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVGPADRIFE 242
LDVS+QA +LN L +LQ++ G TY+FISHDLGVV+++SD+I VM G++VE G D +
Sbjct: 183 LDVSIQAQVLNLLLDLQKEMGLTYIFISHDLGVVEHISDKIIVMNQGQIVETGDVDSVIS 242
Query: 243 NPLHPYTQMLFSAIPIPDPDLAR 265
P HPYTQ L +A+P + + R
Sbjct: 243 APKHPYTQKLLNAVPHLEKSMQR 265
>pir||A72282 oligopeptide ABC transporter, ATP-binding protein - Thermotoga
maritima (strain MSB8)
>gi|4981772|gb|AAD36294.1|AE001778_15 (AE001778)
oligopeptide ABC transporter, ATP-binding protein
[Thermotoga maritima]
Length = 315
Score = 233 bits (587), Expect = 3e-60
Identities = 134/321 (41%), Positives = 200/321 (61%), Gaps = 16/321 (4%)
Query: 4 TVLKVENLKKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTILRL 63
++LKV+NL K FP+ G F +KAVD VSFEI+R L+GESG GKTT G+ IL+L
Sbjct: 2 SLLKVQNLTKEFPL-GFFGKER-LKAVDDVSFEIERSRIVSLIGESGSGKTTVGKLILKL 59
Query: 64 IEPTDGKIIFMGKDVTKLKGEELKWFRRKAQIMFQDPYSSLDP---RQTVFQIIMEPVKF 120
I P+ G+I+ G+D+T++KG EL+ + RK Q +FQDP+SS +P V ++ E F
Sbjct: 60 IRPSSGQILLNGRDITQIKGRELREYYRKVQGVFQDPFSSFNPIYKIDRVLDMVFEEF-F 118
Query: 121 HGIQVDDPEEFVIRLLESVGLNEMH-LYRYPHEFSGGQRQRIALARLLALKPEFIVLDEP 179
+ + ++ SVG+N L +YPH+ SGGQ QRI +AR L L E ++ DE
Sbjct: 119 PDTPASERRTKMEEVIASVGMNPREILGKYPHQLSGGQLQRILIARTLLLNVELLIADEI 178
Query: 180 TSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVGPADR 239
S LD S + +ILN L +L+E+ G + +FI+HDL + Y+SD +MY G +VE+G ++
Sbjct: 179 ISMLDASTRVDILNLLGDLRER-GMSVIFITHDLSLGYYISDETFIMYRGNIVEMGDTEK 237
Query: 240 IFENPLHPYTQMLFSAIPIPDPDLAREMKKKRMKVTGEPPSPINPPKGCRFHPRCPYAKA 299
+F NP+HPYT+ML + +P+ D ++ K+ + E S N P C+++ RCP +
Sbjct: 238 VFHNPIHPYTKMLLES--VPEIDRKWDLSKRFIP---ELVSSSNAP--CKYYDRCP-IRD 289
Query: 300 GLCDKEEPPMVEVEKDHYVAC 320
C ++P MVEVE++H V C
Sbjct: 290 ERCLVQKPAMVEVEENHKVLC 310
>gi|11499359 dipeptide ABC transporter, ATP-binding protein (dppD)
[Archaeoglobus fulgidus] >gi|7445611|pir||A69471
dipeptide ABC transporter, ATP-binding protein (dppD)
homolog - Archaeoglobus fulgidus
>gi|2648781|gb|AAB89480.1| (AE000980) dipeptide ABC
transporter, ATP-binding protein (dppD) [Archaeoglobus
fulgidus]
Length = 313
Score = 232 bits (586), Expect = 4e-60
Identities = 134/325 (41%), Positives = 195/325 (59%), Gaps = 21/325 (6%)
Query: 5 VLKVENLKKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTILRLI 64
+L +ENL F R G V+AVD VS +++GE +VGESGCGK+T +++RLI
Sbjct: 3 LLDIENLTTIFRTRR-----GVVRAVDNVSMSVEKGEFISIVGESGCGKSTLAHSVMRLI 57
Query: 65 ----EPTDGKIIFMGKDVTKLKGEELKWFR-RKAQIMFQDPYSSLDPRQTVFQIIMEPVK 119
E + GKIIF G D+ L EE++ R K ++FQDP +SLDP + + I E +
Sbjct: 58 DYPGEISGGKIIFDGVDLLSLGDEEMREIRGSKIGMVFQDPMTSLDPLEKIGDQISETIM 117
Query: 120 FH-GIQVDDPEEFVIRLLESVGLNEMHLYRYPHEFSGGQRQRIALARLLALKPEFIVLDE 178
H + + + +LE VGL + YPH+ SGGQRQR+ +A ++L P+ ++ DE
Sbjct: 118 EHMDVTKKEAWQMAREMLEKVGLQPERVDSYPHQLSGGQRQRVMIAMAISLNPKLLIADE 177
Query: 179 PTSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVGPAD 238
PT+ALDV VQ I++ L+++ ++ G + I+HD + SDRI VMY G LVE+G A+
Sbjct: 178 PTTALDVIVQEKIMDLLEDM-KREGRAVMLITHDFALAAERSDRIAVMYAGWLVELGKAE 236
Query: 239 RIFENPLHPYTQMLFSAIPIPDPDLAREMKKKRMKVTGEPPSPINPPKGCRFHPRCPYAK 298
++ PLHPYT+ L + +PD + +E+K + G PP INPP+GCRF PRC ++
Sbjct: 237 KLTNEPLHPYTKGLIQS--VPDVWMDKEIK----PLPGFPPDLINPPEGCRFRPRC--SE 288
Query: 299 AGLCDKEEPPMVEVEKDHYVACWLY 323
A +EPP EV+ V CWLY
Sbjct: 289 ASKRCMKEPPEFEVD-GRVVKCWLY 312
>pir||C72421 oligopeptide ABC transporter, ATP-binding protein - Thermotoga
maritima (strain MSB8)
>gi|4980563|gb|AAD35169.1|AE001694_5 (AE001694)
oligopeptide ABC transporter, ATP-binding protein
[Thermotoga maritima]
Length = 320
Score = 231 bits (584), Expect = 7e-60
Identities = 135/327 (41%), Positives = 198/327 (60%), Gaps = 18/327 (5%)
Query: 5 VLKVENLKKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTILRLI 64
+L+++NL K F I +F V AVD V+F+I E F L GESGCGKTTT + IL
Sbjct: 3 LLEIKNLTKIFTIGSIFSRTRIV-AVDNVNFDINEAEIFTLAGESGCGKTTTAKIILGFE 61
Query: 65 EPTDGKIIFMGKDVTKL--KGEELKWFRRKAQIMFQDPYSSLDPRQTVFQIIMEPVKFHG 122
EPT G+II+ G+ + ++ +E + ++ Q +FQ+P+S+ +P + V + E + G
Sbjct: 62 EPTSGEIIYKGRKIDRVHQNEKERRELLKEIQAVFQNPFSTFNPLRKVDRYFYETLFNLG 121
Query: 123 IQ--VDDPEEFVIRLLESVGLN-EMHLYRYPHEFSGGQRQRIALARLLALKPEFIVLDEP 179
I EE + L +VG++ E +YP EFSGGQ QRI++AR L P +V DEP
Sbjct: 122 IADTKKKAEEIIKEKLSAVGISFEEFSEKYPSEFSGGQLQRISIARALLTNPSLLVADEP 181
Query: 180 TSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVGPADR 239
S +D S++ +I+N K+L+E++G + L+I+HDL Y+SDRI VM+ G +VE+GPA++
Sbjct: 182 VSMVDASLRMSIVNLFKDLKEQYGVSVLYITHDLTTAYYVSDRIAVMFRGNIVELGPAEK 241
Query: 240 IFENPLHPYTQMLFSAIPIPDPDLAREMKKK---RMKVTGEPPSPINPPKGCRFHPRCPY 296
+ P HPYTQ+L ++P PDP KKK R+K++ E +GC+F RCP
Sbjct: 242 VLMEPKHPYTQLLRESVPEPDP------KKKWDIRIKLS-ETEQAEYLRQGCKFAGRCPK 294
Query: 297 AKAGLCDKEEPPMVEVEKDHYVACWLY 323
A +C KE PP EV+ V CWLY
Sbjct: 295 A-MDICRKEPPPYFEVD-GVQVKCWLY 319
>pir||E71130 probable oligopeptide transport ATP-binding protein APPD -
Pyrococcus horikoshii >gi|3257220|dbj|BAA29903.1|
(AP000003) 327aa long hypothetical oligopeptide
transport ATP-binding protein APPD [Pyrococcus
horikoshii]
Length = 327
Score = 231 bits (583), Expect = 9e-60
Identities = 129/328 (39%), Positives = 188/328 (56%), Gaps = 27/328 (8%)
Query: 4 TVLKVENLKKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTILRL 63
++L++E L + R G V A+ VSF +K+G G++GESG GK+T G TILR
Sbjct: 3 SILEIEGLTVKYKTR-----YGTVHALSNVSFSVKKGSIVGIIGESGSGKSTLGHTILRT 57
Query: 64 IEPT----DGKIIFMGKDVTKLKGE----ELKWFRRKAQIMFQDPYSSLDPRQTVFQIIM 115
+ GKI+F G D+ ++ E E +W +K ++FQ+ ++ P + ++
Sbjct: 58 LPENARIESGKIMFEGSDLLEIDEEVFRREFRW--KKISMIFQNSMNAFSPVHRIQDQLL 115
Query: 116 EPVK--FHGIQVDDPEEFVIRLLESVGLNEMHLYRYPHEFSGGQRQRIALARLLALKPEF 173
+ + F ++ E + L ++E L +YPHE SGGQRQR+A+ L PE
Sbjct: 116 DVARKCFPNKSRNELLEIIKEKLRIANIDESVLKKYPHELSGGQRQRVAIGMALLADPEI 175
Query: 174 IVLDEPTSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVE 233
++ DEPT+ LDV Q ILN LKE+Q+ G T L I+HD+ VV +S + V+Y GK++E
Sbjct: 176 VIADEPTTGLDVVTQYQILNRLKEIQKDLGITLLLITHDVSVVAALSTDVLVLYAGKVLE 235
Query: 234 VGPADRIFENPLHPYTQMLFSAIPIPDPDLAREM-KKKRMKVTGEPPSPINPPKGCRFHP 292
G R+F+N HPYT +L + P EM K+K ++ G PP NPP GC FHP
Sbjct: 236 YGDIKRVFKNSHHPYTYLLLRSYP--------EMGKEKLYEIPGSPPDLRNPPSGCVFHP 287
Query: 293 RCPYAKAGLCDKEEPPMVEVEKDHYVAC 320
RCPYA LC KEEP +VE+E+ H+ AC
Sbjct: 288 RCPYA-TDLCRKEEPKLVEIEEGHFSAC 314
>pir||B82393 ABC transporter, ATP-binding protein VCA0977 [imported] - Vibrio
cholerae (group O1 strain N16961)
>gi|9658417|gb|AAF96873.1| (AE004424) ABC transporter,
ATP-binding protein [Vibrio cholerae]
Length = 539
Score = 229 bits (577), Expect = 4e-59
Identities = 123/255 (48%), Positives = 169/255 (66%), Gaps = 5/255 (1%)
Query: 5 VLKVENLKKYFPIRGLF--RTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTILR 62
+LK E+++ F ++ F R + +AV G+S E+K+GET G+VGESG GK+T GR ++
Sbjct: 276 LLKAEDIRVKFLVKPYFISRRNQYFEAVKGISLELKQGETLGIVGESGSGKSTLGRALIG 335
Query: 63 LIEPTDGKIIFMGKDVTKLKGEELKWFRRKAQIMFQDPYSSLDPRQTVFQIIMEPVKFHG 122
L+ P+ G+I F G+D L ++ ++ Q++FQDPY SL PR TV +II E + H
Sbjct: 336 LL-PSTGQIAFKGQDFRALSEKQRLALKKDIQMVFQDPYGSLSPRMTVGEIITEGLLVHQ 394
Query: 123 IQVDDPEEF--VIRLLESVGLNEMHLYRYPHEFSGGQRQRIALARLLALKPEFIVLDEPT 180
+ E R LE V L+ + RYPHEFSGGQRQRIA+AR L L+P FI+LDEPT
Sbjct: 395 PHISKLERMQRARRALEEVRLDPNSINRYPHEFSGGQRQRIAIARALILEPSFILLDEPT 454
Query: 181 SALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVGPADRI 240
SALD SVQ ++ LKE+Q++ YLFISHDL VVK +SDR+ VM G+++E G A+ I
Sbjct: 455 SALDRSVQLTVIELLKEIQKRRNIGYLFISHDLAVVKALSDRVLVMQKGQVMEQGSAESI 514
Query: 241 FENPLHPYTQMLFSA 255
F NP H YT+ L +A
Sbjct: 515 FHNPQHEYTKKLIAA 529
Score = 173 bits (433), Expect = 3e-42
Identities = 98/262 (37%), Positives = 157/262 (59%), Gaps = 14/262 (5%)
Query: 5 VLKVENLKKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTILRLI 64
+L+V NL F G V AV VSF+I+ GET +VGESG GK+ + +++L+
Sbjct: 6 LLQVRNLSVSFTTND-----GVVDAVKNVSFDIRPGETLAIVGESGSGKSVSTNALMQLL 60
Query: 65 EPT-----DGKIIFMGKDVTKLKGEELKWFRR-KAQIMFQDPYSSLDPRQTVFQIIMEPV 118
+ I+F G+++ +++ R + ++FQ+P +SL+P V + E +
Sbjct: 61 PKNARIHPESSIMFEGEELLNKTDTQMRRIRGDRIGMIFQEPMTSLNPYMRVGVQVAEAI 120
Query: 119 KFH-GIQVDDPEEFVIRLLESVGLNEMH--LYRYPHEFSGGQRQRIALARLLALKPEFIV 175
+ H + + ++ V+ L + V L + ++PHEFSGGQ QRI +A L +P+ ++
Sbjct: 121 RCHRNVSQNQAKQRVLELFQLVHLPDPKGAYQKFPHEFSGGQLQRIMIAMALINEPDILI 180
Query: 176 LDEPTSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVG 235
DEPT+ALDV+VQA +L +KE+Q G LFI+HDLGVVK+++DR+ VM G +VE G
Sbjct: 181 ADEPTTALDVTVQAEVLRLIKEIQANMGMAILFITHDLGVVKFVADRVLVMCKGDVVEQG 240
Query: 236 PADRIFENPLHPYTQMLFSAIP 257
+++F P H YT+ML ++IP
Sbjct: 241 STEQLFLQPEHDYTRMLINSIP 262
>gb|AAA62691.1| (M57689) sporulation protein [Bacillus subtilis]
Length = 358
Score = 228 bits (576), Expect = 6e-59
Identities = 133/327 (40%), Positives = 198/327 (59%), Gaps = 19/327 (5%)
Query: 5 VLKVENLKKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTILRLI 64
+L+V++L F G G V+A+ GV+F + +GET +VGESG GK+ T + I++LI
Sbjct: 7 LLEVKDLAISFKTYG-----GEVQAIRGVNFHLDKGETLAIVGESGSGKSVTSQAIMKLI 61
Query: 65 EPTDG-----KIIFMGKDVTKLKGEELKWFRRKA-QIMFQDPYSSLDPRQTVFQIIMEPV 118
G +I+F GKD+ L +E++ R K ++FQDP +SL+P V + I E +
Sbjct: 62 PMPPGYFKRGEILFEGKDLVPLSEKEMQNVRGKEIGMIFQDPMTSLNPTMKVGKQITEVL 121
Query: 119 -KFHGIQVDDPEEFVIRLLESVGLN--EMHLYRYPHEFSGGQRQRIALARLLALKPEFIV 175
K I + ++ + LLE VG+ E + ++PHEFSGG RQR+ +A LA P+ ++
Sbjct: 122 FKHEKISKEAAKKRAVELLELVGIPMPEKRVNQFPHEFSGGMRQRVVIAMALAANPKLLI 181
Query: 176 LDEPTSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVG 235
DEPT+ALDV++QA IL +K+LQ+K + +FI+HDLGVV ++DR+ VMY G++VE G
Sbjct: 182 ADEPTTALDVTIQAQILELMKDLQKKIDTSIIFITHDLGVVANVADRVAVMYAGQIVETG 241
Query: 236 PADRIFENPLHPYTQMLFSAIPIPDPDLAREMKKKRMKVTGEPPSPINPPKGCRFHPRCP 295
D IF +P HPYT L +++ P L +++ + G PP NPPKG F R
Sbjct: 242 TVDEIFYDPRHPYTWGLLASM----PTLESSGEEELTAIPGTPPDLTNPPKGDAFALRSS 297
Query: 296 YAKAGLCDKEEPPMVEVEKDHYVACWL 322
YA + ++EPPM +V HYV WL
Sbjct: 298 YAMK-IDFEQEPPMFKVSDTHYVKSWL 323
>pir||D38447 sporulation initiation protein spo0KD - Bacillus subtilis
>gi|580898|emb|CAA39790.1| (X56347) OppD [Bacillus
subtilis]
Length = 336
Score = 228 bits (576), Expect = 6e-59
Identities = 133/327 (40%), Positives = 198/327 (59%), Gaps = 19/327 (5%)
Query: 5 VLKVENLKKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTILRLI 64
+L+V++L F G G V+A+ GV+F + +GET +VGESG GK+ T + I++LI
Sbjct: 7 LLEVKDLAISFKTYG-----GEVQAIRGVNFHLDKGETLAIVGESGSGKSVTSQAIMKLI 61
Query: 65 EPTDG-----KIIFMGKDVTKLKGEELKWFRRKA-QIMFQDPYSSLDPRQTVFQIIMEPV 118
G +I+F GKD+ L +E++ R K ++FQDP +SL+P V + I E +
Sbjct: 62 PMPPGYFKRGEILFEGKDLVPLSEKEMQNVRGKEIGMIFQDPMTSLNPTMKVGKQITEVL 121
Query: 119 -KFHGIQVDDPEEFVIRLLESVGLN--EMHLYRYPHEFSGGQRQRIALARLLALKPEFIV 175
K I + ++ + LLE VG+ E + ++PHEFSGG RQR+ +A LA P+ ++
Sbjct: 122 FKHEKISKEAAKKRAVELLELVGIPMPEKRVNQFPHEFSGGMRQRVVIAMALAANPKLLI 181
Query: 176 LDEPTSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVG 235
DEPT+ALDV++QA IL +K+LQ+K + +FI+HDLGVV ++DR+ VMY G++VE G
Sbjct: 182 ADEPTTALDVTIQAQILELMKDLQKKIDTSIIFITHDLGVVANVADRVAVMYAGQIVETG 241
Query: 236 PADRIFENPLHPYTQMLFSAIPIPDPDLAREMKKKRMKVTGEPPSPINPPKGCRFHPRCP 295
D IF +P HPYT L +++ P L +++ + G PP NPPKG F R
Sbjct: 242 TVDEIFYDPRHPYTWGLLASM----PTLESSGEEELTAIPGTPPDLTNPPKGDAFALRSS 297
Query: 296 YAKAGLCDKEEPPMVEVEKDHYVACWL 322
YA + ++EPPM +V HYV WL
Sbjct: 298 YAMK-IDFEQEPPMFKVSDTHYVKSWL 323
>sp|P24136|OPPD_BACSU OLIGOPEPTIDE TRANSPORT ATP-BINDING PROTEIN OPPD
>gi|7442529|pir||B69669 oligopeptide transport
ATP-binding protein oppD - Bacillus subtilis
>gi|2633500|emb|CAB13003.1| (Z99110) oligopeptide ABC
transporter (ATP-binding protein) [Bacillus subtilis]
Length = 358
Score = 228 bits (576), Expect = 6e-59
Identities = 133/327 (40%), Positives = 198/327 (59%), Gaps = 19/327 (5%)
Query: 5 VLKVENLKKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTILRLI 64
+L+V++L F G G V+A+ GV+F + +GET +VGESG GK+ T + I++LI
Sbjct: 7 LLEVKDLAISFKTYG-----GEVQAIRGVNFHLDKGETLAIVGESGSGKSVTSQAIMKLI 61
Query: 65 EPTDG-----KIIFMGKDVTKLKGEELKWFRRKA-QIMFQDPYSSLDPRQTVFQIIMEPV 118
G +I+F GKD+ L +E++ R K ++FQDP +SL+P V + I E +
Sbjct: 62 PMPPGYFKRGEILFEGKDLVPLSEKEMQNVRGKEIGMIFQDPMTSLNPTMKVGKQITEVL 121
Query: 119 -KFHGIQVDDPEEFVIRLLESVGLN--EMHLYRYPHEFSGGQRQRIALARLLALKPEFIV 175
K I + ++ + LLE VG+ E + ++PHEFSGG RQR+ +A LA P+ ++
Sbjct: 122 FKHEKISKEAAKKRAVELLELVGIPMPEKRVNQFPHEFSGGMRQRVVIAMALAANPKLLI 181
Query: 176 LDEPTSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVG 235
DEPT+ALDV++QA IL +K+LQ+K + +FI+HDLGVV ++DR+ VMY G++VE G
Sbjct: 182 ADEPTTALDVTIQAQILELMKDLQKKIDTSIIFITHDLGVVANVADRVAVMYAGQIVETG 241
Query: 236 PADRIFENPLHPYTQMLFSAIPIPDPDLAREMKKKRMKVTGEPPSPINPPKGCRFHPRCP 295
D IF +P HPYT L +++ P L +++ + G PP NPPKG F R
Sbjct: 242 TVDEIFYDPRHPYTWGLLASM----PTLESSGEEELTAIPGTPPDLTNPPKGDAFALRSS 297
Query: 296 YAKAGLCDKEEPPMVEVEKDHYVACWL 322
YA + ++EPPM +V HYV WL
Sbjct: 298 YAMK-IDFEQEPPMFKVSDTHYVKSWL 323
>pir||H75380 peptide ABC transporter, ATP-binding protein - Deinococcus
radiodurans (strain R1)
>gi|6459331|gb|AAF11130.1|AE002000_6 (AE002000) peptide
ABC transporter, ATP-binding protein [Deinococcus
radiodurans]
Length = 386
Score = 228 bits (574), Expect = 1e-58
Identities = 134/336 (39%), Positives = 192/336 (56%), Gaps = 24/336 (7%)
Query: 3 ETVLKVENLKKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTILR 62
E +L V NLK YF G VK+VDGV+F IK+GET +VGESG GK+ T T++R
Sbjct: 31 EVLLAVNNLKTYFNTDD-----GVVKSVDGVTFHIKKGETLAVVGESGSGKSVTSLTVMR 85
Query: 63 LI-----EPTDGKIIFMGKD-----VTKLKGEELKWFR-RKAQIMFQDPYSSLDPRQTVF 111
LI + G+I+F GKD + + E++ R ++FQ+P +SL+P TV
Sbjct: 86 LIPMPPGQIAGGEILFTGKDGVQRNLVNVSEAEMRRIRGNDISMIFQEPMTSLNPVYTVG 145
Query: 112 QIIMEPVKFH-GIQVDDPEEFVIRLLESVGLN--EMHLYRYPHEFSGGQRQRIALARLLA 168
I E V H G + + +L VG+ E + YPH+ SGG RQR+ +A L+
Sbjct: 146 DQIAEAVVLHQGKTRKEAMDVATDMLRFVGIPAPEKRVNEYPHQMSGGMRQRVMIAMALS 205
Query: 169 LKPEFIVLDEPTSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYL 228
KP ++ DEPT+ALDV++QA IL+ ++ LQ + G + LFI+H+LGVV M+DR+ VMY
Sbjct: 206 CKPALLIADEPTTALDVTIQAQILDLMRNLQREVGMSILFITHNLGVVAEMADRVVVMYG 265
Query: 229 GKLVEVGPADRIFENPLHPYTQMLFSAIPIPDPD----LAREMKKKRMKVTGEPPSPINP 284
G++VE G IF+ P HPYT L ++IP P D + + KK+ + G P+P+N
Sbjct: 266 GRVVEEGDVIEIFKAPRHPYTMGLLNSIPRPSEDEHAHVPGQPKKRLEAIPGNVPNPLNL 325
Query: 285 PKGCRFHPRCPYAKAGLCDKEEPPMVEVEKDHYVAC 320
P GC F PRC +A C + P + + H C
Sbjct: 326 PPGCTFEPRCKFA-VPQCSQAVPALEDTGGGHMARC 360
>gb|AAG20449.1| (AE005117) oligopeptide ABC transporter; OppD2 [Halobacterium sp.
NRC-1]
Length = 363
Score = 227 bits (573), Expect = 1e-58
Identities = 133/333 (39%), Positives = 192/333 (56%), Gaps = 24/333 (7%)
Query: 3 ETVLKVENLKKYFPIRGLFRTIG-WVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTIL 61
E++L + NL+ +FRT ++AVDG+S I GET G+VGESG GK+ T R+I+
Sbjct: 16 ESILSIRNLQT------VFRTDHEHIRAVDGISLSISPGETLGIVGESGSGKSVTARSIM 69
Query: 62 RLIEPT-----DGKIIFMGKDVTKLKGEELKWFRRKAQ-IMFQDPYSSLDPRQTVFQIIM 115
L++ + I+F G ++T+L ++ + R ++FQDP SL+P TV I
Sbjct: 70 GLVDAPGEVLPESSIVFDGTELTELSADQYQEVRGSGVGMIFQDPLKSLNPVYTVGNQIR 129
Query: 116 EPVKFH-GIQVDDPEEFVIRLLESVGLN--EMHLYRYPHEFSGGQRQRIALARLLALKPE 172
E ++ + GI + + I LLE V + E L YP+EFSGG RQR +A +LA P+
Sbjct: 130 EALRINRGITGQEATDVAIDLLEDVAIPDPERRLDEYPNEFSGGMRQRAVIAMMLACDPD 189
Query: 173 FIVLDEPTSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLV 232
++ DEPT+ALDV++QA I+ L+++Q + LFI+HD+GV+ +SDR+ VMY G+ V
Sbjct: 190 VLICDEPTTALDVTIQAQIVELLQDIQAERDLAILFITHDMGVIAEISDRVNVMYAGEFV 249
Query: 233 EVGPADRIFENPLHPYTQMLFSAIPIPDPDLAREMKKKRMKVTGEPPSPINPPKGCRFHP 292
E P + +F NP HPYTQ L AIP D ++ + G+ P+P P CRF P
Sbjct: 250 EKAPVEELFANPKHPYTQGLLDAIPGTSVD-----DERLNTIEGDVPTPNQPATDCRFAP 304
Query: 293 RCPYAKAGLCDKEEPPMVEVE--KDHYVACWLY 323
RCP A C + P V V DH AC LY
Sbjct: 305 RCPKAFED-CTEVHPTHVSVSDTHDHSTACLLY 336
>gi|10955092 moaD [Agrobacterium tumefaciens] >gi|11278927|pir||T45539 moaD
protein [imported] - Agrobacterium tumefaciens plasmid
pTi15955 >gi|2665715|gb|AAB88475.1| (AF242881) moaD
[Agrobacterium tumefaciens]
Length = 588
Score = 225 bits (568), Expect = 5e-58
Identities = 124/291 (42%), Positives = 172/291 (58%), Gaps = 7/291 (2%)
Query: 5 VLKVENLKKYFPIRG--LFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTILR 62
+L+V +L FP+RG L G V AV+ SF I +GET GLVGESG GK+T G+ I+
Sbjct: 286 ILEVRDLTVRFPLRGGLLGNVQGNVHAVEKASFAIGKGETLGLVGESGSGKSTIGKAIID 345
Query: 63 LIEPTDGKIIFMGKDVTKLKGEELKWFRRKAQIMFQDPYSSLDPRQTVFQIIMEPVKFHG 122
L G I+ G+ + + L RR Q++FQDP+ SLD RQT+ I+EP+ HG
Sbjct: 346 LAPRFGGSIVVDGRTIDYADEKSLAVLRRDVQMIFQDPFGSLDSRQTIGSAIVEPMYVHG 405
Query: 123 IQVD-DPEEFVIRLLESVGLNEMHLYRYPHEFSGGQRQRIALARLLALKPEFIVLDEPTS 181
I + E + LLE VGL+ PHEFSGGQRQRI +AR L++ P+ I+ DE S
Sbjct: 406 IASGRELREKMEWLLEKVGLDPARASSLPHEFSGGQRQRICIARALSMSPKLIIADEAVS 465
Query: 182 ALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVGPADRIF 241
ALDV+++ I+ + +LQ + G +YLFISHD+ V+ + R+ VMY G+LVE+G D +
Sbjct: 466 ALDVAIKGQIIELMMDLQSEFGVSYLFISHDMAAVEKICTRVAVMYFGELVEIGGRDNVI 525
Query: 242 ENPLHPYTQMLFSAIPIPDPDLAREMKKKRMKVTGEPPSPINPPKGCRFHP 292
P H YT+ L SA+PI P + R + P P++P K F P
Sbjct: 526 GRPGHSYTKRLLSAVPITHP----SQRSARSTAALQVPQPVSPIKPVGFIP 572
Score = 176 bits (443), Expect = 2e-43
Identities = 111/289 (38%), Positives = 160/289 (54%), Gaps = 26/289 (8%)
Query: 3 ETVLKVENLKKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTILR 62
++VL V+NL F G + V +SF+I G T +VGESG GK+ T I+
Sbjct: 4 QSVLSVKNLNVAF---------GKKQVVQDLSFDIAPGSTLAVVGESGSGKSVTSLAIMG 54
Query: 63 L----IEPTDGKIIFMGKDVTKLKGEELKWFRR-KAQIMFQDPYSSLDPRQTVFQIIMEP 117
L + G I G+++ L E+ R K ++FQ+P +SL+P Q V I E
Sbjct: 55 LLPVGVAKASGSIQLNGRELLSLSESEMCGIRGGKISMIFQEPMTSLNPVQKVGFQIGEA 114
Query: 118 VKFH-GIQVDDPEEFVIRLLESVGLN--EMHLYRYPHEFSGGQRQRIALARLLALKPEFI 174
++ H G++ + V+ +L+ VG+ E + YPH FSGG RQR+ +A LA P I
Sbjct: 115 IRIHRGLRGKELRNAVLEMLKKVGIPDAERRIDNYPHTFSGGMRQRVMIAMALACNPALI 174
Query: 175 VLDEPTSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEV 234
+ DEPT+ALDV+VQA IL LK+LQ + LFI+HD+GVV ++DR+ VM G++VE
Sbjct: 175 IADEPTTALDVTVQAQILELLKQLQRETNVALLFITHDMGVVAEIADRVLVMRGGQVVES 234
Query: 235 GPADRIFENPLHPYTQMLFSAIPIPDPDLAREMKKKRMKVTGEPPSPIN 283
GP D +F P PYT++L A P LA TG+P + I+
Sbjct: 235 GPVDSVFTRPESPYTKVLIEAAPSVAGKLA---------TTGQPTTAID 274
>pir||A70482 ABC transporter - Aquifex aeolicus >gi|2984331|gb|AAC07852.1|
(AE000774) ABC transporter [Aquifex aeolicus]
Length = 305
Score = 225 bits (568), Expect = 5e-58
Identities = 125/293 (42%), Positives = 183/293 (61%), Gaps = 13/293 (4%)
Query: 5 VLKVENLKKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTILRLI 64
+L ++NL K + + F A+ VS IK+G+ +VGESG GK+T G+ ILRL
Sbjct: 3 LLSIQNLTKVYKVPAGFLRKKNFFALKEVSLSIKQGDFLAIVGESGSGKSTLGKIILRLE 62
Query: 65 EPTDGKIIFMGKDVTKLKGEELKWFRRKAQIMFQDPYSSLDPRQTVFQIIMEPVKFHGIQ 124
+PT GK+ F GKD+ + E + RK +FQDP SSL+PR V +I+ EP+ H +
Sbjct: 63 KPTKGKVSFKGKDIFSMGKE----YTRKVSAVFQDPRSSLNPRMKVEEILEEPLIVH--R 116
Query: 125 VDDPEEFVIRLLESVGLNEMHLYRYPHEFSGGQRQRIALARLLALKPEFIVLDEPTSALD 184
V +E V+++L+ V L+E L + P + SGGQ QR+A+AR L L+PE IV DEPT++LD
Sbjct: 117 VKGRKERVLKVLQRVRLSEELLEKRPLQISGGQAQRVAIARALILEPELIVADEPTASLD 176
Query: 185 VSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVGPADRIFENP 244
VSVQ IL KEL K G ++ F++HD+ VV+ +++ +GV+Y G L+E+G + + +NP
Sbjct: 177 VSVQEEILELFKELNSK-GISFFFVTHDIRVVEKVANMVGVIYAGILMELGKKEEVLKNP 235
Query: 245 LHPYTQMLFSAIPIPDPDLAREMKKKRMKVTGEPPSPINPPKGCRFHPRCPYA 297
LHPYT+ L +P+ P +K +K E I P +GC F+PRCP A
Sbjct: 236 LHPYTKFLLENVPVRHP-----KDRKPLKYLQEEEVSI-PEEGCPFYPRCPEA 282
>gb|AAC43497.1| (U35442) PepF [Rhodobacter sphaeroides]
Length = 216
Score = 225 bits (567), Expect = 7e-58
Identities = 116/215 (53%), Positives = 154/215 (70%), Gaps = 2/215 (0%)
Query: 20 LFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTILRLIEPTDGKIIFMGKDVT 79
L RT+G VKAV+GVS I+ GET G+VGESG GKTT G ILRLIE ++G I+F+G+++
Sbjct: 2 LRRTVGHVKAVNGVSLSIREGETLGVVGESGSGKTTLGLGILRLIE-SEGPILFLGQEIH 60
Query: 80 KLKGEELKWFRRKAQIMFQDPYSSLDPRQTVFQIIMEPVKFHGIQVD-DPEEFVIRLLES 138
+ L+ RR QI+FQDPY SL PR TV QI+ E + HG++ D V +L
Sbjct: 61 SRRSRALREIRRDMQIVFQDPYGSLSPRMTVEQIVAEGLGVHGVEPGRDRRSMVAEILTE 120
Query: 139 VGLNEMHLYRYPHEFSGGQRQRIALARLLALKPEFIVLDEPTSALDVSVQANILNTLKEL 198
VGL+ + RYPHEFSGGQRQR+A+AR + L+P+F+VLDEPTSALD++VQ I++ L++L
Sbjct: 121 VGLDPAAMGRYPHEFSGGQRQRVAIARAMILRPKFVVLDEPTSALDMTVQVQIVDLLRDL 180
Query: 199 QEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVE 233
Q K G YLFISHDL VV+ +S ++ VM G +VE
Sbjct: 181 QRKWGLAYLFISHDLRVVRALSHKVIVMKEGNVVE 215
>pir||D71163 probable oligopeptide transport ATP-binding protein AppF -
Pyrococcus horikoshii >gi|3256910|dbj|BAA29593.1|
(AP000002) 324aa long hypothetical oligopeptide
transport ATP-binding protein AppF [Pyrococcus
horikoshii]
Length = 324
Score = 225 bits (567), Expect = 7e-58
Identities = 126/325 (38%), Positives = 195/325 (59%), Gaps = 17/325 (5%)
Query: 5 VLKVENLKKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTILRLI 64
+L+V NL+ Y+ G+VKAVDGVSFE+K+GE FG+ GESGCGK+T +++
Sbjct: 3 LLRVRNLRIYYSTPR-----GFVKAVDGVSFEVKKGEVFGIAGESGCGKSTLVHSLILRK 57
Query: 65 EPTD---GKIIFMGKDVTKLKGEELKWFRRKA-QIMFQDPYSSLDPRQTVFQIIMEPVKF 120
P GK IF GKD+ KL EE + + K I+ Q ++L+P + + I+ + +
Sbjct: 58 PPMTHKGGKAIFKGKDLMKLSREEARKIQYKELSIIPQYAMNALNPTKKIKDIVWDLARE 117
Query: 121 HGIQ-VDDPEEFVIRLLESVGLNEMHLYRYPHEFSGGQRQRIALARLLALKPEFIVLDEP 179
HG+Q + E+ + L V L+ YP E SGG RQR + L P+ ++ DE
Sbjct: 118 HGMQDKKEVEKLLKERLSMVKLSPKVAEMYPVELSGGMRQRATMVVSTLLNPDLLIADEV 177
Query: 180 TSALDVSVQANILNTLKELQEKHGF-TYLFISHDLGVVKYMSDRIGVMYLGKLVEVGPAD 238
TSALDV+ Q ++ L E+ + +F++HDL +++ ++DR+ +MY GK+VE+G +
Sbjct: 178 TSALDVTTQRVVIELLHHFMEEGIVKSIIFVTHDLALLRQIADRVMIMYAGKVVEIGSME 237
Query: 239 RIFENPLHPYTQMLFSAIPIPDPDLAREMKKKRMK-VTGEPPSPINPPKGCRFHPRCPYA 297
+ E+P HPYTQ+L +++ P + K++R++ + G P S +NPP+GCRF+ RCPYA
Sbjct: 238 EVLESPAHPYTQLLLNSL----PRMGVHYKRERLRGIPGYPISLLNPPEGCRFYTRCPYA 293
Query: 298 KAGLCDKEEPPMVEVEKDHYVACWL 322
+C + EP +VEV HY AC L
Sbjct: 294 MQ-VCREVEPELVEVSPGHYAACHL 317
>sp|P42064|APPD_BACSU OLIGOPEPTIDE TRANSPORT ATP-BINDING PROTEIN APPD
>gi|2119773|pir||I40543 oligopeptide transport
ATP-binding protein appD - Bacillus subtilis
>gi|677943|gb|AAA62356.1| (U20909) AppD [Bacillus
subtilis] >gi|2633490|emb|CAB12993.1| (Z99110)
oligopeptide ABC transporter (ATP-binding protein)
[Bacillus subtilis]
Length = 328
Score = 224 bits (565), Expect = 1e-57
Identities = 129/336 (38%), Positives = 193/336 (57%), Gaps = 34/336 (10%)
Query: 4 TVLKVENLKKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTILRL 63
T+L+V NLK YF FR + AVDGV F I +GET LVGESG GK+ T +I+ L
Sbjct: 3 TLLEVNNLKTYF-----FRKKEPIPAVDGVDFHISKGETVALVGESGSGKSITSLSIMGL 57
Query: 64 IEPTDGKII-------------FMGKDVTKLKGEELKWFRRKAQIMFQDPYSSLDPRQTV 110
++ + GKI+ F D K++G E+ ++FQ+P +SL+P T+
Sbjct: 58 VQSSGGKIMDGSIKLEDKDLTSFTENDYCKIRGNEVS-------MIFQEPMTSLNPVLTI 110
Query: 111 FQIIMEPVKFH-GIQVDDPEEFVIRLLESVGLN--EMHLYRYPHEFSGGQRQRIALARLL 167
+ I E + +H ++ + + + LL+ VG + E + YPH SGG RQR+ +A L
Sbjct: 111 GEQITEVLIYHKNMKKKEARQRAVELLQMVGFSRAEQIMKEYPHRLSGGMRQRVMIAIAL 170
Query: 168 ALKPEFIVLDEPTSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMY 227
+ P+ ++ DEPT+ALDV++QA +L +K+L +K + L I+HDLGVV +DR+ VMY
Sbjct: 171 SCNPKLLIADEPTTALDVTIQAQVLELMKDLCQKFNTSILLITHDLGVVSEAADRVIVMY 230
Query: 228 LGKLVEVGPADRIFENPLHPYTQMLFSAIPIPDPDLAREMKKKRMKVTGEPPSPINPPKG 287
G++VE D +F PLHPYT+ L ++IP+ D ++ K + G P+P N P G
Sbjct: 231 CGQVVENATVDDLFLEPLHPYTEGLLTSIPVIDGEI-----DKLNAIKGSVPTPDNLPPG 285
Query: 288 CRFHPRCPYAKAGLCDKEEPPMVEVEKDHYVACWLY 323
CRF PRCP A C +P ++ + V C+LY
Sbjct: 286 CRFAPRCPKA-MDKCWTNQPSLLTHKSGRTVRCFLY 320
>pir||T34759 oligopeptide ABC transporter ATP-binding protein - Streptomyces
coelicolor >gi|3402246|emb|CAA20182.1| (AL031184)
oligopeptide ABC transporter ATP-binding protein
[Streptomyces coelicolor A3(2)]
Length = 365
Score = 224 bits (565), Expect = 1e-57
Identities = 129/331 (38%), Positives = 194/331 (57%), Gaps = 25/331 (7%)
Query: 6 LKVENLKKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTILRLIE 65
L+V +LK +FP G VK+VDG+SF++++G+T G+VGESG GK+ T I+ L
Sbjct: 25 LEVRDLKVHFPTDD-----GLVKSVDGLSFQLEKGKTLGIVGESGSGKSVTSLGIMGLHT 79
Query: 66 P---------TDGKIIFMGKDVTKLKGEELKWFR-RKAQIMFQDPYSSLDPRQTVFQIIM 115
G+I G ++ + ++ R R+ ++FQDP S+L P T+ Q I+
Sbjct: 80 AGQYGKRKARISGEIWLDGTELLSADPDHVRKLRGREMAMIFQDPLSALHPYYTIGQQIV 139
Query: 116 EPVKFHG-IQVDDPEEFVIRLLESVGLNE--MHLYRYPHEFSGGQRQRIALARLLALKPE 172
E + H + + + +L+ VG+ + + YPHEFSGG RQR +A L PE
Sbjct: 140 EAYRIHHKVDKKTAKRRAVEMLDRVGIPQPDKRVDSYPHEFSGGMRQRAMIAMSLVNNPE 199
Query: 173 FIVLDEPTSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLV 232
++ DEPT+ALDV+VQA IL+ +++LQ++ G + I+HDLGVV ++D + VMY G+ V
Sbjct: 200 LLIADEPTTALDVTVQAQILDLIRDLQKEFGSAVIVITHDLGVVAELADDLLVMYGGRCV 259
Query: 233 EVGPADRIFENPLHPYTQMLFSAIPIPDPDLAREMKKKRMKVTGEPPSPINPPKGCRFHP 292
E GPA+++F P HPYT L ++ P L R+ +++ + V G PPS IN P GC F+P
Sbjct: 260 ERGPAEKVFYEPRHPYTWGLLGSM----PRLDRDQQERLIPVKGSPPSLINLPSGCAFNP 315
Query: 293 RCPYA---KAGLCDKEEPPMVEVEKDHYVAC 320
RCPYA K + P + EV H+ AC
Sbjct: 316 RCPYADVPKDDVTRTVRPELTEVGSKHWAAC 346
>sp|P33916|YEJF_ECOLI HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PROTEIN YEJF
>gi|7445954|pir||C64987 probable oligopeptide transport
protein yejF - Escherichia coli
>gi|405909|gb|AAA16379.1| (U00008) yejF [Escherichia
coli] >gi|1788506|gb|AAC75241.1| (AE000307) putative
ATP-binding component of a transport system [Escherichia
coli K12]
Length = 529
Score = 222 bits (559), Expect = 6e-57
Identities = 124/255 (48%), Positives = 164/255 (63%), Gaps = 5/255 (1%)
Query: 4 TVLKVENLKKYFPIRG--LFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTIL 61
T+L VE L+ FPIR L R + V +SF ++ GET GLVGESG GK+TTG +L
Sbjct: 274 TLLDVEQLQVAFPIRKGILKRIVDHNVVVKNISFTLRAGETLGLVGESGSGKSTTGLALL 333
Query: 62 RLIEPTDGKIIFMGKDVTKLKGEELKWFRRKAQIMFQDPYSSLDPRQTVFQIIMEPVKFH 121
RLI + G IIF G+ + L +L R + Q++FQDP SSL+PR V QII E ++ H
Sbjct: 334 RLIN-SQGSIIFDGQPLQNLNRRQLLPIRHRIQVVFQDPNSSLNPRLNVLQIIEEGLRVH 392
Query: 122 G--IQVDDPEEFVIRLLESVGLNEMHLYRYPHEFSGGQRQRIALARLLALKPEFIVLDEP 179
+ E+ VI ++ VGL+ +RYP EFSGGQRQRIA+AR L LKP I+LDEP
Sbjct: 393 QPTLSAAQREQQVIAVMHEVGLDPETRHRYPAEFSGGQRQRIAIARALILKPSLIILDEP 452
Query: 180 TSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVGPADR 239
TS+LD +VQA IL LK LQ+KH YLFISHDL VV+ + ++ ++ G++VE GP R
Sbjct: 453 TSSLDKTVQAQILTLLKSLQQKHQLAYLFISHDLHVVRALCHQVIILRQGEVVEQGPCAR 512
Query: 240 IFENPLHPYTQMLFS 254
+F P YT+ L +
Sbjct: 513 VFATPQQEYTRQLLA 527
Score = 182 bits (457), Expect = 5e-45
Identities = 107/270 (39%), Positives = 160/270 (58%), Gaps = 14/270 (5%)
Query: 1 MTETVLKVENLKKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTI 60
MT+T+L +ENL F + RT+ V+ VS +I+ GET LVGESG GK+ T +I
Sbjct: 1 MTQTLLAIENLSVGFRHQQTVRTV-----VNDVSLQIEAGETLALVGESGSGKSVTALSI 55
Query: 61 LRL-----IEPTDGKIIFMGKDVTKLKGEELKWFR-RKAQIMFQDPYSSLDPRQTVFQII 114
LRL +E G I F G+ + + L+ R K ++FQ+P SL+P T+ + +
Sbjct: 56 LRLLPSPPVEYLSGDIRFHGESLLHASDQTLRGVRGNKIAMIFQEPMVSLNPLHTLEKQL 115
Query: 115 MEPVKFH-GIQVDDPEEFVIRLLESVGLNEM--HLYRYPHEFSGGQRQRIALARLLALKP 171
E + H G++ + ++ L+ VG+ + L YPH+ SGG+RQR+ +A L +P
Sbjct: 116 YEVLSLHRGMRREAARGEILNCLDRVGIRQAAKRLTDYPHQLSGGERQRVMIAMALLTRP 175
Query: 172 EFIVLDEPTSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKL 231
E ++ DEPT+ALDVSVQA IL L+ELQ + LFI+H+L +V+ ++ R+ VM G+
Sbjct: 176 ELLIADEPTTALDVSVQAQILQLLRELQGELNMGMLFITHNLSIVRKLAHRVAVMQNGRC 235
Query: 232 VEVGPADRIFENPLHPYTQMLFSAIPIPDP 261
VE A +F +P HPYTQ L ++ P DP
Sbjct: 236 VEQNYAATLFASPTHPYTQKLLNSEPSGDP 265
>sp|Q53193|Y4TR_RHISN PROBABLE PEPTIDE ABC TRANSPORTER ATP-BINDING PROTEIN Y4TR
>gi|1486422|emb|CAA92400.1| (Z68203) OppD homologue
[Rhizobium sp.] >gi|2182648|gb|AAB91871.1| (AE000098)
Y4tR [Rhizobium sp. NGR234]
Length = 335
Score = 220 bits (556), Expect = 1e-56
Identities = 119/303 (39%), Positives = 180/303 (59%), Gaps = 14/303 (4%)
Query: 28 KAVDGVSFEIKRGETFGLVGESGCGKTTTGRTILRLI-----EPTDGKIIFMGKDVTKLK 82
+A+ GV+F +K GE G+VGESGCGK+ T +ILRL+ + G++IF G+++ +L
Sbjct: 30 RALGGVNFHVKSGEMLGIVGESGCGKSVTALSILRLLPKQTAKTVGGEVIFKGRNLLELS 89
Query: 83 GEELKWFR-RKAQIMFQDPYSSLDPRQTVFQIIMEPVKFHG-IQVDDPEEFVIRLLESVG 140
+++ R + ++FQDP +SL P TV + I E V+ HG + + E + +L V
Sbjct: 90 ERQMREVRGNRIAMIFQDPMTSLSPVHTVGRQIAEAVQIHGRVSRAEALEKALEMLRLVR 149
Query: 141 LN--EMHLYRYPHEFSGGQRQRIALARLLALKPEFIVLDEPTSALDVSVQANILNTLKEL 198
+ E L YPHE SGG RQR +A LA PE ++ DEPT+ALDV++QA IL + +L
Sbjct: 150 IADPERRLNNYPHEMSGGMRQRAMIAMALACSPELLIADEPTTALDVTIQAQILRLIVDL 209
Query: 199 QEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVGPADRIFENPLHPYTQMLFSAIPI 258
+++ G +FI+HDLGVV R+ VMY G++VE +F P HPYT+ L +++
Sbjct: 210 KDRMGTAVMFITHDLGVVAETCQRVIVMYAGRIVEQASVTDLFARPTHPYTRALMNSV-- 267
Query: 259 PDPDLAREMKKKRMKVTGEPPSPINPPKGCRFHPRCPYAKAGLCDKEEPPMVEVEKDHYV 318
PD R + + ++ G PS P GC F RCP+A G+C ++ P + E++ H
Sbjct: 268 --PDRRRGRQSRLPEIPGVVPSLREPLVGCSFAERCPFA-IGVCREKMPVLSEIQPGHAA 324
Query: 319 ACW 321
ACW
Sbjct: 325 ACW 327
>pir||T45280 probable ABC transporter intracellular ATPase chain bldkD
[imported] - Streptomyces coelicolor
>gi|1532204|gb|AAB09557.1| (U68036) putative ABC
transporter intracellular ATPase subunit BldkD
[Streptomyces coelicolor A3(2)]
Length = 353
Score = 220 bits (556), Expect = 1e-56
Identities = 128/318 (40%), Positives = 187/318 (58%), Gaps = 20/318 (6%)
Query: 3 ETVLKVENLKKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTILR 62
+ L V +LK +F G G VKAVDG+SF+++RG+T G+VGESG GK+ T +L
Sbjct: 17 DAFLSVRDLKVHFSTEG-----GVVKAVDGLSFDLERGKTLGIVGESGSGKSVTNLAVLG 71
Query: 63 LIE----PTDGKIIFMGKDVTKLKGEELKWFR-RKAQIMFQDPYSSLDPRQTVFQIIMEP 117
L + DG I G+++T ++L+ R +K ++FQD ++L P TV + I EP
Sbjct: 72 LHDRRRTAIDGSITLDGQELTDASEKQLEKLRGKKMAMIFQDALTALSPYYTVGRQIAEP 131
Query: 118 -VKFHGIQVDDPEEFVIRLLESVGLN--EMHLYRYPHEFSGGQRQRIALARLLALKPEFI 174
+K +G D I LL+ VG+ + + YPH+FSGG QR +A L+ P+ +
Sbjct: 132 FMKHNGASKKDARCGAIDLLQKVGIPHPQKRVDDYPHQFSGGIGQRAMIAMALSCNPDLL 191
Query: 175 VLDEPTSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEV 234
+ DEPT+ALDV+VQA IL+ LK+LQ++ + I+HDLGVV M+D I VMY G+ VE
Sbjct: 192 IADEPTTALDVTVQAQILDLLKDLQQEFASAIIMITHDLGVVGNMADDIMVMYAGRAVER 251
Query: 235 GPADRIFENPLHPYTQMLFSAIPIPDPDLAREMKKKRMKVTGEPPSPINPPKGCRFHPRC 294
G + ++P HPYT L S++ P+L ++ + M + G PPS +NPP GC FHPRC
Sbjct: 252 GTVREVLKSPQHPYTWGLLSSM----PNLTSDVDEPLMPIPGSPPSLMNPPSGCAFHPRC 307
Query: 295 PY---AKAGLCDKEEPPM 309
+ C E P +
Sbjct: 308 GFTDLVSGERCSGERPTL 325
>dbj|BAB04069.1| (AP001508) oligopeptide ABC transporter (ATP-binding protein)
[Bacillus halodurans]
Length = 329
Score = 220 bits (556), Expect = 1e-56
Identities = 126/330 (38%), Positives = 196/330 (59%), Gaps = 21/330 (6%)
Query: 3 ETVLKVENLKKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTILR 62
+T+L V LK YF + G V +V+GVSFE+K GET +VGESGCGK+ T +I+
Sbjct: 4 DTLLSVRELKTYF-----YTESGAVPSVNGVSFEVKHGETVAVVGESGCGKSVTSLSIMG 58
Query: 63 LIEPTDGKII-----FMGKDVTKLKGEELKWFR-RKAQIMFQDPYSSLDPRQTVFQIIME 116
L+ + GKI+ F G+D+T + E + R + ++FQ+P +SL+P T+ + E
Sbjct: 59 LVR-SPGKIVGGDIRFNGQDLTTISEREYRKLRGNELSMIFQEPLTSLNPLFTIGNQLGE 117
Query: 117 PVKFHG-IQVDDPEEFVIRLLESVGLNEMH-LYR-YPHEFSGGQRQRIALARLLALKPEF 173
+ H + ++ ++ I +L+ VG+ +YR YPH+ SGG RQR+ +A LA +P+
Sbjct: 118 VILQHQQVTKEEAKQKGIEMLKKVGIPRAEQVYRSYPHQLSGGMRQRVMIAMALACEPKL 177
Query: 174 IVLDEPTSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVE 233
++ DEPT+ALDV++QA IL +++L +++ L I+HDLGVV M+D + VMY G++VE
Sbjct: 178 LIADEPTTALDVTIQAQILQLMRKLVKENDTAILLITHDLGVVAEMADTVIVMYAGQVVE 237
Query: 234 VGPADRIFENPLHPYTQMLFSAIPIPDPDLAREMKKKRMKVTGEPPSPINPPKGCRFHPR 293
+F P HPYTQ L ++ P +K + G P+ PKGCRF PR
Sbjct: 238 QADVFTLFATPAHPYTQGLLASTP-----NIHASGEKLQSIEGTVPTHETMPKGCRFFPR 292
Query: 294 CPYAKAGLCDKEEPPMVEVEKDHYVACWLY 323
C +A C +EPP+++ + +V CWL+
Sbjct: 293 CLHA-TEQCVHQEPPLMKTGRGQHVRCWLF 321
>pir||A72284 oligopeptide ABC transporter, ATP-binding protein - Thermotoga
maritima (strain MSB8)
>gi|4981747|gb|AAD36271.1|AE001776_7 (AE001776)
oligopeptide ABC transporter, ATP-binding protein
[Thermotoga maritima]
Length = 319
Score = 220 bits (555), Expect = 2e-56
Identities = 132/327 (40%), Positives = 188/327 (57%), Gaps = 13/327 (3%)
Query: 3 ETVLKVENLKKYFPIRGL-FRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTIL 61
E L ++NL K + I L FR+ + AVD VSF +KR E F L GESGCGK+TT + IL
Sbjct: 2 EDTLILKNLTKVYSIGSLLFRSK--ITAVDDVSFSLKRAEIFTLAGESGCGKSTTAKMIL 59
Query: 62 RLIEPTDGKIIFMGKDVTKLKGEELKWFRRKAQIMFQDPYSSLDPRQTVFQIIMEPVKFH 121
EPT G IIF G + K + K F RK Q +FQ+P+ S +P TV I E V +
Sbjct: 60 GFEEPTSGDIIFEGNSIQWWKKRK-KDFLRKVQAVFQNPFESFNPLLTVDDIFFETVMNY 118
Query: 122 GI--QVDDPEEFVIRLLESVGLNEMHLY-RYPHEFSGGQRQRIALARLLALKPEFIVLDE 178
G+ ++ E+ + L+ VGL + RY E SGGQ QR ++AR L P ++ DE
Sbjct: 119 GLANSRNEAEKLIDEKLQLVGLKFEDINGRYQSELSGGQLQRASIARSLLSNPSLLIADE 178
Query: 179 PTSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVGPAD 238
P S +D S++ +I+N +L+++ G + ++I+HDL Y+SDRI +M+ G +VE GP D
Sbjct: 179 PVSMVDASLRMSIVNLFAKLRDQLGVSVIYITHDLATAYYVSDRIAIMFRGNIVETGPVD 238
Query: 239 RIFENPLHPYTQMLFSAIPIPDPDLAREMKKKRMKVTGEPPSPINPPKGCRFHPRCPYAK 298
++ +P HPYTQ+L +IP PDP E K R + +GC+F RCPY K
Sbjct: 239 KVLIDPKHPYTQLLRESIPDPDP----EKKWSREITVSDTEYEEYLKEGCKFAGRCPYVK 294
Query: 299 AGLCDKEEPPMVEVEKDHYVACWLYAK 325
+C +E+P V V+ V C +Y K
Sbjct: 295 E-ICRREKPDDVLVD-GVLVKCHIYKK 319
>pir||C75142 oligopeptide transport ATP-binding protein appf PAB0630 -
Pyrococcus abyssi (strain Orsay)
>gi|5458363|emb|CAB49852.1| (AJ248285) OLIGOPEPTIDE
TRANSPORT ATP-BINDING PROTEIN APPF [Pyrococcus abyssi]
Length = 322
Score = 220 bits (554), Expect = 2e-56
Identities = 126/326 (38%), Positives = 194/326 (58%), Gaps = 19/326 (5%)
Query: 5 VLKVENLKKYFPIRGLFRT-IGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTILRL 63
+L V NL+ Y+ RT +G+V+AVDGVSFE+ GE FG+ GESGCGK+T +++
Sbjct: 3 LLDVRNLRVYY------RTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLILR 56
Query: 64 IEPTD---GKIIFMGKDVTKLKGEELKWFR-RKAQIMFQDPYSSLDPRQTVFQIIMEPVK 119
P + G IF G+D+ L +EL+ + + I+ Q ++L+P + + I+ + +
Sbjct: 57 KPPMEYKGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDLAR 116
Query: 120 FHGI-QVDDPEEFVIRLLESVGLNEMHLYRYPHEFSGGQRQRIALARLLALKPEFIVLDE 178
HG + EE + L V L+ YP E SGG RQR + L P+ ++ DE
Sbjct: 117 EHGYADRREVEELLRERLSMVKLSPRVADMYPVELSGGMRQRATMVVSTLLNPDLLIADE 176
Query: 179 PTSALDVSVQANILNTLKE-LQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVGPA 237
TSALDV+ Q ++ L +QE + +F++HDL +++ ++DR+ VMY GK+VE+GP
Sbjct: 177 ITSALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIGPM 236
Query: 238 DRIFENPLHPYTQMLFSAIPIPDPDLAREMKKKRMK-VTGEPPSPINPPKGCRFHPRCPY 296
+ + ENP HPYTQ+L +++ P + K++R+ + G P S +NPPKGCRF+ RCP+
Sbjct: 237 EEVLENPAHPYTQLLLNSL----PRMGVHYKRERLSGIPGYPISLLNPPKGCRFYTRCPF 292
Query: 297 AKAGLCDKEEPPMVEVEKDHYVACWL 322
A C EP +V+V +DHY AC L
Sbjct: 293 AMED-CRDVEPKLVKVGRDHYAACHL 317
>pir||E72393 oligopeptide ABC transporter, ATP-binding protein - Thermotoga
maritima (strain MSB8)
>gi|4980804|gb|AAD35392.1|AE001712_5 (AE001712)
oligopeptide ABC transporter, ATP-binding protein
[Thermotoga maritima]
Length = 316
Score = 219 bits (553), Expect = 3e-56
Identities = 123/323 (38%), Positives = 191/323 (59%), Gaps = 15/323 (4%)
Query: 6 LKVENLKKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTILRLIE 65
+ V NL K F + +F ++ + A+D VSFEI GE F L GESGCGKTTT + +L L E
Sbjct: 3 VSVRNLTKIFRVGSIF-SLKKLVAIDNVSFEIGSGEIFSLAGESGCGKTTTAKILLGLEE 61
Query: 66 PTDGKIIFMGKDVTKLKGEELKWFRRKAQIMFQDPYSSLDPRQTVFQIIMEPVKFHGIQV 125
PT+G++++ G + E+ F +K Q + Q+P+S+ +P + V + + V ++
Sbjct: 62 PTNGEVLYDGIKLKDFVENEMH-FLKKVQTVQQNPFSTFNPFRKVEDYLFKTVL--RFKM 118
Query: 126 DDPEEFVIRLLES----VGLNEMHLY-RYPHEFSGGQRQRIALARLLALKPEFIVLDEPT 180
+ ++ +RL+E VGLN + RYP EFSGGQ QRI++AR L P F+V DEP
Sbjct: 119 ANTKDEALRLIEEKLSVVGLNFDEIKGRYPSEFSGGQLQRISIARALLTNPSFLVADEPV 178
Query: 181 SALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVGPADRI 240
S +D S++ +I+N ++L+E+ G + L+I+HDL Y++D++ +M+ G +VE+G A I
Sbjct: 179 SMIDASLRISIVNLFRDLKERFGISILYITHDLSTAYYVADKLAIMFRGSIVEMGRAQDI 238
Query: 241 FENPLHPYTQMLFSAIPIPDPDLAREMKKKRMKVTGEPPSPINPPKGCRFHPRCPYAKAG 300
+ P HPYT++L S+IP+PDP+ + E KGC+F RCP +
Sbjct: 239 LDTPFHPYTKLLKSSIPVPDPEYEWDENINLSSTEREEFF----AKGCKFASRCPEVMS- 293
Query: 301 LCDKEEPPMVEVEKDHYVACWLY 323
+C + PP +V V CWLY
Sbjct: 294 ICRESVPPDFDV-NGRVVKCWLY 315
>pir||D82301 peptide ABC transporter, ATP-binding protein VC0616 [imported] -
Vibrio cholerae (group O1 strain N16961)
>gi|9655049|gb|AAF93782.1| (AE004147) peptide ABC
transporter, ATP-binding protein [Vibrio cholerae]
Length = 331
Score = 219 bits (553), Expect = 3e-56
Identities = 117/330 (35%), Positives = 196/330 (58%), Gaps = 12/330 (3%)
Query: 3 ETVLKVENLKKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTILR 62
E +++ +NL K F I ++A++ VSF++ + +VGESG GK+TT + I +
Sbjct: 7 ELLVEGKNLVKDFAINSNALKQPMMRAINDVSFKMYKSRGLSVVGESGSGKSTTAKMIAK 66
Query: 63 LIEPTDGKIIFMGKDVTKLKG-EELKWFRRKAQIMFQDPYSSLDPRQTVFQIIMEPVKFH 121
+ PT G I + G+D+ + ++L +R Q+++QDP+ SL+P T+F I P+ H
Sbjct: 67 MYAPTSGVIEYKGRDIQDIVSRDDLMHYREGVQMVWQDPFGSLNPTHTIFHHIARPLLIH 126
Query: 122 GIQVD----DPEEFVIRLLESVGL--NEMHLYRYPHEFSGGQRQRIALARLLALKPEFIV 175
+ EE V LLE VGL + +YPH+ SGGQRQR+ LAR +A+ E ++
Sbjct: 127 KKVTPGNKKELEERVYELLEQVGLIPPKATAAKYPHQLSGGQRQRVNLARNIAVGAEVVL 186
Query: 176 LDEPTSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVG 235
DEPTS LDVS++A +LN ++E++ + + L+I+HD+ +Y+++ + VMY+G +VE G
Sbjct: 187 ADEPTSMLDVSIRAGVLNLMEEMKFERQMSLLYITHDIATARYIAEDLAVMYVGHMVEWG 246
Query: 236 PADRIFENPLHPYTQMLFSAIPIPDPDLAREMKKKRMKVTGEPPSPINPPKGCRFHPRCP 295
D I +P HPYT++L SA+P P + +++ + ++ P+ + GC F RC
Sbjct: 247 DTDEIIHDPQHPYTKLLVSAVPDPKKSIHEKLEGNKGEIPLWTPNSV----GCPFAGRCL 302
Query: 296 YAKAGLCDKEEPPMVEVEKDHYVACWLYAK 325
YA A C + P + ++ +H+V C+L+ K
Sbjct: 303 YASA-KCREALPEVTQLSDNHFVRCYLFEK 331
>pir||E82301 peptide ABC transporter, ATP-binding protein VC0617 [imported] -
Vibrio cholerae (group O1 strain N16961)
>gi|9655050|gb|AAF93783.1| (AE004147) peptide ABC
transporter, ATP-binding protein [Vibrio cholerae]
Length = 327
Score = 219 bits (553), Expect = 3e-56
Identities = 124/311 (39%), Positives = 184/311 (58%), Gaps = 18/311 (5%)
Query: 25 GWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTILRLIEP----TDGKIIFMGKDVTK 80
G V+A + VSF++ GE FGL GESGCGK+T +++RL +P T G++IF G+D+ K
Sbjct: 20 GDVRACNNVSFDLAPGEVFGLAGESGCGKSTVAFSLMRLHKPPAFITGGEVIFNGEDILK 79
Query: 81 LKGEELKWFRRKAQIM-FQDPYSSLDPRQTVFQIIMEPVKFH-GIQVDDPEEFVIRLLES 138
E ++ FR K M FQ ++L+P T+ + + + H + + + LLE
Sbjct: 80 YSDERMQAFRWKEMSMVFQSAMNALNPVLTMEEQFCDVITRHTNMTREQAKRRAEGLLEI 139
Query: 139 VGLNEMHLYRYPHEFSGGQRQRIALARLLALKPEFIVLDEPTSALDVSVQANILNTLKEL 198
V ++ L YPH+FSGG RQR+ +A LAL P+ I++DEPT+ALDV VQ IL + L
Sbjct: 140 VDIHPSRLNDYPHQFSGGMRQRLVIAIALALNPKMIIMDEPTTALDVVVQREILQKIYAL 199
Query: 199 QEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVGPADRIFENPLHPYTQMLFSAIPI 258
+E+ GF+ LFI+HDL ++ SDRIG+MY G+L+EV P+ +I E P HPYT+ L S+ P
Sbjct: 200 KEEFGFSILFITHDLSLMVEFSDRIGIMYSGELIEVAPSKQILETPYHPYTKGLGSSFP- 258
Query: 259 PDPDLAREMKKKRMKVTGEPPSPIN---PPKGCRFHPRCPYAKAGLCDKEEPPMVEVEKD 315
+ + K+TG P +P+N P+GCRF RC C K + ++E
Sbjct: 259 -------PLTGPKTKLTGIPGNPLNLLDIPQGCRFQARCDRVHEA-CTKVPTVLRQIEHG 310
Query: 316 HYVACWLYAKA 326
+ C LY ++
Sbjct: 311 RFSNCHLYTQS 321
>pir||F75068 dipeptide abc transporter, ATP-binding protein (dppd) PAB1346 -
Pyrococcus abyssi (strain Orsay)
>gi|5458956|emb|CAB50443.1| (AJ248287) dipeptide ABC
transporter, ATP-binding protein (dppD) [Pyrococcus
abyssi]
Length = 322
Score = 219 bits (552), Expect = 4e-56
Identities = 125/326 (38%), Positives = 195/326 (59%), Gaps = 19/326 (5%)
Query: 5 VLKVENLKKYFPIRGLFRT-IGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTILRL 63
+L V NL+ Y+ RT +G+V+AVDGVSFE+ GE FG+ GESGCGK+T +++
Sbjct: 3 LLDVRNLRVYY------RTPVGYVRAVDGVSFEVGEGEVFGVAGESGCGKSTLVHSLILR 56
Query: 64 IEPTD---GKIIFMGKDVTKLKGEELKWFR-RKAQIMFQDPYSSLDPRQTVFQIIMEPVK 119
P + G IF G+D+ L +EL+ + + I+ Q ++L+P + + I+ + +
Sbjct: 57 KPPMEYKGGSAIFKGRDLMSLPRDELRKIQYSELSIIPQYAMNALNPTKRIKDIVWDLAR 116
Query: 120 FHGI-QVDDPEEFVIRLLESVGLNEMHLYRYPHEFSGGQRQRIALARLLALKPEFIVLDE 178
HG + EE + L V L+ YP E SGG RQR + L P+ ++ DE
Sbjct: 117 EHGYADRREVEELLRERLSMVKLSPRVADMYPVELSGGMRQRATMVVSTLLNPDLLIADE 176
Query: 179 PTSALDVSVQANILNTLKE-LQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVGPA 237
TSALDV+ Q ++ L +QE + +F++HDL +++ ++DR+ VMY GK+VE+GP
Sbjct: 177 ITSALDVTTQRVVIELLHHFMQEGIVKSIIFVTHDLALLRQIADRVMVMYAGKVVEIGPM 236
Query: 238 DRIFENPLHPYTQMLFSAIPIPDPDLAREMKKKRMK-VTGEPPSPINPPKGCRFHPRCPY 296
+ + ENP HPYTQ+L +++ P + K++R+ + G P S +NPP+GCRF+ RCP+
Sbjct: 237 EEVLENPAHPYTQLLLNSL----PRMGVHYKRERLSGIPGYPISLLNPPRGCRFYTRCPF 292
Query: 297 AKAGLCDKEEPPMVEVEKDHYVACWL 322
A C + EP +V+V K+HY AC L
Sbjct: 293 AMEH-CPEVEPKLVKVGKEHYAACHL 317
>gb|AAC64255.1| (AF042861) putative OppD [Treponema denticola]
Length = 330
Score = 218 bits (550), Expect = 7e-56
Identities = 126/332 (37%), Positives = 190/332 (56%), Gaps = 22/332 (6%)
Query: 1 MTETVLKVENLKKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTI 60
M +L+V+NL YF F G +KAV GV F I+ G+T G+VGESG GK+ T +I
Sbjct: 1 MKNPLLEVKNLHTYF-----FTNKGTIKAVQGVDFTIEAGKTLGIVGESGSGKSITAFSI 55
Query: 61 LRLIEP----TDGKIIFMGKDVTKLKGEELKWFR-RKAQIMFQDPYSSLDPRQTVFQIIM 115
L L+E G+I F G ++ L +E++ R ++FQ+P +SL+P + + +
Sbjct: 56 LNLLEYPGKIVQGEINFGGINLVNLGKKEIRKIRGNDISMIFQEPMTSLNPVHRIGRQLS 115
Query: 116 EPVKFHG-IQVDDPEEFVIRLLESVGLN--EMHLYRYPHEFSGGQRQRIALARLLALKPE 172
EP+ H + + I LL V + E +Y YP + SGG RQR+ +A LA KP
Sbjct: 116 EPLILHQHMSKKEAWAAAIDLLREVKIPNPENVVYNYPFQLSGGMRQRVMIAMALACKPR 175
Query: 173 FIVLDEPTSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLV 232
++ DEPT+ALDV++QA I + +L++KH +FI+HDLG + ++D + VMY G++V
Sbjct: 176 LLIADEPTTALDVTIQAQIFKLMNDLKKKHNTAIMFITHDLGAIAELADDVAVMYTGEIV 235
Query: 233 EVGPADRIFENPL---HPYTQMLFSAIPIPDPDLAREMKKKRMKVTGEPPSPINPPKGCR 289
E P D IF+ HPY + L +IP+ D ++ + ++ G P P+ PKGCR
Sbjct: 236 ERAPVDVIFDRQTQFSHPYKEGLLESIPLLDEEV-----EYLAQIQGSVPHPLKLPKGCR 290
Query: 290 FHPRCPYAKAGLCDKEEPPMVEVEKDHYVACW 321
F RC YA C E+P +VEVE+ H + C+
Sbjct: 291 FSTRCEYA-TEKCRNEKPELVEVEEGHLIRCF 321
>pir||G72283 oligopeptide ABC transporter, ATP-binding protein - Thermotoga
maritima (strain MSB8)
>gi|4981745|gb|AAD36269.1|AE001776_5 (AE001776)
oligopeptide ABC transporter, ATP-binding protein
[Thermotoga maritima]
Length = 326
Score = 218 bits (550), Expect = 7e-56
Identities = 128/333 (38%), Positives = 193/333 (57%), Gaps = 24/333 (7%)
Query: 3 ETVLKVENLKKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTILR 62
ET++ +NLK Y+ + L+ + VKAVD VS +I E +G+ GESGCGK+T + +L
Sbjct: 2 ETLISGKNLKAYY-VLDLWGSKKVVKAVDNVSLDILPNEIYGIAGESGCGKSTLLKALLA 60
Query: 63 LIEPT----DGKIIF----MGKDVTKLKGEELKWFRRK-AQIMFQDPYSSLDP----RQT 109
L++P DG++++ +VT LK E ++ R + Q L+P R T
Sbjct: 61 LLDPPLRLMDGELLYNIEGRPTNVTLLKSETIRKLRWSFISYIPQGSMHVLNPVKRVRDT 120
Query: 110 VFQIIMEPVKFHGIQVDDPEEFVIRLLESVGLNEMHLYRYPHEFSGGQRQRIALARLLAL 169
+I+ VK Q + + ++ L+ +GL E L +PH+ SGG RQR+ +A L
Sbjct: 121 FIEILSSHVKK---QTKEFLDLAVQHLKDLGLPERVLNMFPHQLSGGMRQRVTIALATVL 177
Query: 170 KPEFIVLDEPTSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLG 229
KP I DEPT+ALDV Q ++ ++++Q T + ++HD+GV ++ R+ +MY G
Sbjct: 178 KPRVIFADEPTTALDVVAQRAVMQLIRKIQNDLKNTVVLVTHDMGVHAQITTRMAIMYAG 237
Query: 230 KLVEVGPADRIFENPLHPYTQMLFSAIPIPDPDLAREMKKKRMKVTGEPPSPINPPKGCR 289
K+VE GP IF+NPLHPYT+ L ++P A KK R + G PPS + PP GCR
Sbjct: 238 KIVEEGPTLEIFKNPLHPYTRYLIQSLP------AIGDKKLRSGIPGSPPSLVAPPPGCR 291
Query: 290 FHPRCPYAKAGLCDKEEPPMVEVEKDHYVACWL 322
FHPRCP+A + C +EEP + E++ H VAC+L
Sbjct: 292 FHPRCPHA-SQRCREEEPLLKEIKPGHKVACFL 323
>gb|AAK43155.1| Maltose ABC transporter, ATP-binding protein [Sulfolobus
solfataricus]
Length = 617
Score = 217 bits (548), Expect = 1e-55
Identities = 113/262 (43%), Positives = 169/262 (64%), Gaps = 7/262 (2%)
Query: 3 ETVLKVENLKKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTILR 62
E V+K+ NL K + IR + AV+ VSFE+K+G LVG SG GK+T + +
Sbjct: 354 EVVMKILNLSKIYYIRKNLILSEPINAVNDVSFELKKGTITALVGGSGHGKSTIAKILAG 413
Query: 63 LIEPTDGKIIFMGKDVTKLKGEELKWFRRKAQIMFQDPYSSLDPRQTVFQIIMEPVKFHG 122
+I+ T GKII +GKDV++ W++ Q++FQDPYSSLDPR TV + P+ H
Sbjct: 414 MIQQTSGKIILLGKDVSEYGVRNSMWYKENVQMIFQDPYSSLDPRHTVRWHVERPLLIHK 473
Query: 123 IQVDDPEEF---VIRLLESVGLN--EMHLYRYPHEFSGGQRQRIALARLLALKPEFIVLD 177
+V + ++ +I +L++VGL E +LY+YPHE SGG+RQR+A+AR A++P+ +V D
Sbjct: 474 -KVSNKDQLLPKIIEVLKNVGLKPPEKYLYKYPHELSGGERQRVAIARATAVEPKVLVAD 532
Query: 178 EPTSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVGPA 237
EP S LD S++A ILN +K+ +K+G + L+I+HD+ V Y++D I V+Y G++VE G
Sbjct: 533 EPVSMLDASLRAGILNLIKKF-KKNGISILYITHDIATVNYIADEIMVIYKGRIVEKGNT 591
Query: 238 DRIFENPLHPYTQMLFSAIPIP 259
+ NP H YT+ L A+P P
Sbjct: 592 YEVISNPSHEYTKRLIEAVPDP 613
Score = 202 bits (509), Expect = 4e-51
Identities = 115/326 (35%), Positives = 175/326 (53%), Gaps = 17/326 (5%)
Query: 3 ETVLKVENLKKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTILR 62
+++LKV L G F G+V V V+FE+ E F + GESGCGK+T I
Sbjct: 6 DSLLKVNELTA-----GYFNQDGFVIGVTNVNFEVYPNEIFAIAGESGCGKSTLAMAIYG 60
Query: 63 LIEPTD----GKIIFMGKDVTKLKGEELKWFRRKAQIMF-QDPYSSLDPRQTVFQIIMEP 117
L++ G + KD+ + EEL+ R K + Q +LDP + +M
Sbjct: 61 LLKYPGVVLRGHVYLKDKDILSITQEELRKLRMKEFVYVPQFAMDALDPVAKIGDQMMRA 120
Query: 118 VKFHGIQVDDPEEFVIRLLESVGLNEMHLYRYPHEFSGGQRQRIALARLLALKPEFIVLD 177
HG+ V++ + + LE V L + YPHE SGG RQR+ +A + L P I+LD
Sbjct: 121 AVSHGVNVEEARKLIKEKLELVDLPYNVVNMYPHELSGGMRQRVVIATSILLNPSLIILD 180
Query: 178 EPTSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVGPA 237
EPT+ LDV VQ IL LK +Q + G + + ISHD+ ++ +SDR+G+MY G++VE+G
Sbjct: 181 EPTTGLDVIVQYEILKDLKRIQRQLGVSLVIISHDISMLLMISDRVGIMYAGEIVEIGSK 240
Query: 238 DRIFENPLHPYTQMLFSAIPIPDPDLAREMKKKRMKVTGEPPSPINP-PKGCRFHPRCPY 296
+ I + P HPYT +L S++ P L + ++K + + G PP ++ P CRF+ RCP+
Sbjct: 241 EEIIKRPSHPYTYLLISSL----PSLVKR-REKLLSIPGNPPLMLSKVPNSCRFYDRCPF 295
Query: 297 AKAGLCDKEEPPMVEVEKDHYVACWL 322
K C P + ++ H C+L
Sbjct: 296 -KMEKCSTLNPALGDIMDGHKARCFL 320
>pir||B72421 oligopeptide ABC transporter, ATP-binding protein - Thermotoga
maritima (strain MSB8)
>gi|4980562|gb|AAD35168.1|AE001694_4 (AE001694)
oligopeptide ABC transporter, ATP-binding protein
[Thermotoga maritima]
Length = 332
Score = 217 bits (548), Expect = 1e-55
Identities = 131/333 (39%), Positives = 182/333 (54%), Gaps = 27/333 (8%)
Query: 5 VLKVENLKKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTILRLI 64
VL+ ENLK Y+ I +F VKAVD V+ I E +G+ GESGCGK+T R + I
Sbjct: 3 VLRTENLKSYY-ILDIFGKKRVVKAVDDVNISIMENEIYGIAGESGCGKSTLLRALFAAI 61
Query: 65 EPTD----GKIIFM--GK--DVTKLKGEELKWFRRKAQIMF-----QDPYSSLDPRQTVF 111
EP GK+++ GK DV L EE RR+ + F Q S L+P +
Sbjct: 62 EPPQRIVGGKVLYRENGKEVDVYSLSDEE----RRRLRWSFISYVPQGSMSVLNPVVKIK 117
Query: 112 QIIMEPVKFH--GIQVDDPEEFVIRLLESVGLNEMHLYRYPHEFSGGQRQRIALARLLAL 169
+ + ++ H G ++ E ++ +GL L YPH+ SGG RQR+ +A L
Sbjct: 118 ETFKDFIESHTTGKTKEEAYEMAKEHIKELGLPIEILNAYPHQLSGGMRQRVTIALATVL 177
Query: 170 KPEFIVLDEPTSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLG 229
P+ I+ DEPT+ALDV Q ++ LKE+Q T + ++HD+GV ++DRI +MY G
Sbjct: 178 SPKVIIADEPTTALDVVTQRGVVQLLKEIQSSRQNTIILVTHDMGVHANVTDRIAIMYAG 237
Query: 230 KLVEVGPADRIFENPLHPYTQMLFSAIPIPDPDLAREMKKKRMKVTGEPPSPINPPKGCR 289
K++E G + IFENP+HPYT+ L ++P K +R G PPS + P GC
Sbjct: 238 KIIEEGKTEEIFENPMHPYTKYLIYSLP------KFGDKGRRESAPGSPPSLADLPPGCS 291
Query: 290 FHPRCPYAKAGLCDKEEPPMVEVEKDHYVACWL 322
FHPRCP+A C KE PP+ E H VACWL
Sbjct: 292 FHPRCPHA-FDRCKKEVPPLKEYLPGHRVACWL 323
>gb|AAC24218.1| (AF055482) ABC transporter [Thermotoga neapolitana]
Length = 326
Score = 217 bits (547), Expect = 1e-55
Identities = 132/337 (39%), Positives = 195/337 (57%), Gaps = 32/337 (9%)
Query: 3 ETVLKVENLKKYFPIR--GLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTI 60
ET+++ +NLK Y+ + G RTI +AVD VS +I GE +G+ GESGCGK+T +T+
Sbjct: 2 ETLVEGKNLKAYYVLEFWGKKRTI---RAVDNVSLKIFSGEIYGIAGESGCGKSTLLKTL 58
Query: 61 LRLIEPTDGKIIFMGK----------DVTKLKGEE---LKWFRRKAQIMFQDPYSSLDPR 107
L +EP +F G+ +V LK EE LKW R + Q L+P
Sbjct: 59 LANLEPP--LRLFGGELNYWLDSKPVNVVSLKEEERRRLKW--RFISYIPQGSMHVLNPV 114
Query: 108 QTVFQIIMEPVKFH-GIQVDDPEEFVIRLLESVGLNEMHLYRYPHEFSGGQRQRIALARL 166
+ + ME +K H Q + E I L+++GL L +PH+ SGG RQR+ +A
Sbjct: 115 KRIRDTFMEILKSHVRRQKETFLEMAIEHLKALGLPSRVLDMFPHQLSGGMRQRVTIALA 174
Query: 167 LALKPEFIVLDEPTSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVM 226
LKP I+ DEPT+ALDV Q ++ +K++Q++ T + ++HD+G+ ++ R+ +M
Sbjct: 175 TLLKPRIILADEPTTALDVVAQRAVIQLIKKIQKELKNTIVLVTHDMGIHAQVTTRMAIM 234
Query: 227 YLGKLVEVGPADRIFENPLHPYTQMLFSAIP-IPDPDLAREMKKKRMKVTGEPPSPINPP 285
Y GK+VE GP IF+ PLHPYT+ L ++P + D K+ R + G PPS ++PP
Sbjct: 235 YAGKIVEEGPTLEIFKEPLHPYTRYLIQSLPRVGD-------KQLREGIPGSPPSLVSPP 287
Query: 286 KGCRFHPRCPYAKAGLCDKEEPPMVEVEKDHYVACWL 322
GCRFHPRCP+A C++EEP +EV H AC+L
Sbjct: 288 SGCRFHPRCPHA-TQRCEEEEPVFLEVNPGHRAACFL 323
>gb|AAK42736.1| Dipeptide ABC transporter ATP binding protein (dppD-3) [Sulfolobus
solfataricus]
Length = 324
Score = 217 bits (547), Expect = 1e-55
Identities = 125/331 (37%), Positives = 195/331 (58%), Gaps = 25/331 (7%)
Query: 5 VLKVENLKKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTILRLI 64
VL++ NL Y+ I WVK + V+ ++++GE G+VGESG GK+T G I R++
Sbjct: 6 VLQIRNLNVYYNT-----LISWVKVLSDVNLDVEKGEIVGVVGESGSGKSTLGHAISRIL 60
Query: 65 EPT---DGKIIFMGKDVTKLKGEELKWFRRKAQIM-FQDPYSSLDPRQTVFQIIMEPVKF 120
P G II G ++ KLK EL+ +R M FQ+P +SL+P + V ++E VK
Sbjct: 61 PPNARIQGDIIVDGVNLAKLKDSELQKYRGTWVFMIFQNPLNSLNPVKKVGSQLLEAVKI 120
Query: 121 H----GIQVDDPEEF--VIRLLESVGLNEMH--LYRYPHEFSGGQRQRIALARLLALKPE 172
G + ++ VI +L+ + L + + + RYPH+ SGGQ QRI ++ L LKP+
Sbjct: 121 RYQREGKKAEEESLMRDVIEVLKDLRLPDPYSIIDRYPHQLSGGQVQRIVISMALLLKPK 180
Query: 173 FIVLDEPTSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLV 232
++ DEPTSALDV++QA ++N K+L ++ + LFI+HD+ + +SDRI VMY G+++
Sbjct: 181 LLIADEPTSALDVTIQAQVVNLFKQLNKEINTSILFITHDISLAYVVSDRIVVMYAGRIM 240
Query: 233 EVGPADRIFENPLHPYTQMLFSAIPIPDPDLAREMKKKRMKVTGEPPSPINPPKGCRFHP 292
E G + + ++P+HPYTQ L ++IP D + +K + G PPS P GC+F
Sbjct: 241 EDGKVEEVLKSPMHPYTQGLVASIPSGDKN------QKLTAIPGNPPSFFALPTGCKFSN 294
Query: 293 RCPYAKAGLCDKEEPPMVEVEKDHYVACWLY 323
RC +C K+EP ++E + + CWLY
Sbjct: 295 RCSKV-FDICRKKEPSIIE-KNGRKIRCWLY 323
>dbj|BAA15129.1| (D90788) Dipeptide transport ATP-binding protein DppF. [Escherichia
coli]
Length = 262
Score = 216 bits (544), Expect = 3e-55
Identities = 117/278 (42%), Positives = 168/278 (60%), Gaps = 20/278 (7%)
Query: 45 LVGESGCGKTTTGRTILRLIEPTDGKIIFMGKDVTKLKGEELKWFRRKAQIMFQDPYSSL 104
+VGESGCGK+T + ++ +++P+ G+ I G +R Q++FQDP SSL
Sbjct: 1 IVGESGCGKSTLAQLLMGMLQPSHGQYIRSGS-------------QRIMQMVFQDPLSSL 47
Query: 105 DPRQTVFQIIMEPVKFHGIQVDDPEEFVIR-LLESVGLNEMHLYRYPHEFSGGQRQRIAL 163
+PR V++II EP+ + + L VG+ +L R PH FSGGQRQRIA+
Sbjct: 48 NPRLPVWRIITEPLWIAKRSSEQQRRALAEELAVQVGIRPEYLDRLPHAFSGGQRQRIAI 107
Query: 164 ARLLALKPEFIVLDEPTSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRI 223
AR L+ +P+ IVLDEPTSALD+SVQA ILN L LQE HG TY+ ISH++ V+++MSDR+
Sbjct: 108 ARALSSQPDVIVLDEPTSALDISVQAQILNLLVTLQENHGLTYVLISHNVSVIRHMSDRV 167
Query: 224 GVMYLGKLVEVGPADRIFENPLHPYTQMLFSAIPIPDPDLAREMKKKRMKVTGEPPSPIN 283
VMYLG++VE+G A ++ P HPYT++L ++P D L E ++ + G
Sbjct: 168 AVMYLGQIVELGDAQQVLTAPAHPYTRLLLDSLPAIDKPLEEEWALRKTDLPGNR----T 223
Query: 284 PPKGCRFHPRCPYAKAGLCDKEEPPMVEVEKDHYVACW 321
P+GC F+ RCP A G C+ + + E + CW
Sbjct: 224 LPQGCFFYERCPLATHG-CEVRQSLAIR-EDGRELRCW 259
>pir||B72282 oligopeptide ABC transporter, ATP-binding protein - Thermotoga
maritima (strain MSB8)
>gi|4981773|gb|AAD36295.1|AE001778_16 (AE001778)
oligopeptide ABC transporter, ATP-binding protein
[Thermotoga maritima]
Length = 326
Score = 215 bits (542), Expect = 6e-55
Identities = 127/331 (38%), Positives = 195/331 (58%), Gaps = 18/331 (5%)
Query: 1 MTETVLKVENLKKYFPIRGLFRTI-GWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRT 59
+ E VL V +L+ Y+ RT+ G+VKAVDGVSF+IKRGE G+ GESGCGK+T G
Sbjct: 4 VAEVVLDVRDLRIYY------RTLYGYVKAVDGVSFDIKRGEILGIAGESGCGKSTLGNG 57
Query: 60 ILRLIEPTD---GKIIFMGKDVTKLKGEELKWFR-RKAQIMFQDPYSSLDPRQTVFQIIM 115
++ L P G+ I GK++ L +EL+ R K I+ Q +++P + + QII
Sbjct: 58 LILLKPPMKYMGGEAILDGKNIMALSPKELRKVRYEKISIIPQYAMDAMNPTKKIKQIID 117
Query: 116 EPVKFHGIQVDDPEEFVIRLLESVGLNEMHLYRYPHEFSGGQRQRIALARLLALKPEFIV 175
+ + HG + ++ + LE V L + L YP E SGG +QR+ + + P+ ++
Sbjct: 118 DLLHEHGESFERKKDVIEERLEIVNLGKKVLNMYPIELSGGMKQRMVMVISTLMNPDVLI 177
Query: 176 LDEPTSALDVSVQANILNTLKELQEKHGFTYL-FISHDLGVVKYMSDRIGVMYLGKLVEV 234
DE TSALDVS Q +++ L E++EK L FI+HDL V+ ++D++ V+Y G++ E+
Sbjct: 178 ADEITSALDVSSQRSVIQMLYEMREKEIMGSLAFITHDLSVLYQIADKVMVLYAGRVAEI 237
Query: 235 GPADRIFENPLHPYTQMLFSAIPIPDPDLAREMKKKRMKVTGEPPSPINPPKGCRFHPRC 294
P + I + PLHPYT+ML S++P R + K + G PPS +N GCRF RC
Sbjct: 238 SPMEDIIQEPLHPYTKMLLSSLPKIG---VRYSQTKLKGIPGYPPSLLNIGPGCRFRDRC 294
Query: 295 PYAKAGLCDKEEPPMVEVEKDHYVACWLYAK 325
PYA +++PP+ +V+ V+CWL+ +
Sbjct: 295 PYAFEKC--EQDPPVFDVD-GRKVSCWLFER 322
>emb|CAC05750.1| (AL391751) putative peptide transport system ATP-binding protein
[Streptomyces coelicolor]
Length = 327
Score = 215 bits (542), Expect = 6e-55
Identities = 126/317 (39%), Positives = 188/317 (58%), Gaps = 20/317 (6%)
Query: 5 VLKVENLKKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTILRLI 64
+L+V +L F R G KAV+GVS+ + GET ++GESG GK+ T +TI+ ++
Sbjct: 2 LLEVRDLHVEFHTRD-----GVAKAVNGVSYGVDAGETLAVLGESGSGKSVTAQTIMGIL 56
Query: 65 E-----PTDGKIIFMGKDVTKLKGEELKWFRRKAQIM-FQDPYSSLDPRQTVFQIIMEPV 118
+ T G+I+F G+D+ KLK EE + R M FQD SSL+P TV + E
Sbjct: 57 DIPPGRVTAGEILFEGRDLLKLKEEERRKVRGAEMAMIFQDALSSLNPVLTVGAQLAEMF 116
Query: 119 KFH-GIQVDDPEEFVIRLLESVGLN--EMHLYRYPHEFSGGQRQRIALARLLALKPEFIV 175
H G+ D + L++ V + + + +YPH+FSGG RQRI +A +AL+P+ I+
Sbjct: 117 TVHRGMSRKDAHAKAVELMDRVRIPAAKERVRQYPHQFSGGMRQRIMIAMAMALEPKLII 176
Query: 176 LDEPTSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVG 235
DEPT+ALDV+VQA +++ L ELQ + + I+HDLGVV ++D+I VMY G++VE
Sbjct: 177 ADEPTTALDVTVQAQVMDLLAELQRELHMGLILITHDLGVVADVADKIAVMYAGRIVETA 236
Query: 236 PADRIFENPLHPYTQMLFSAIPIPDPDLAREMKKKRMKVTGEPPSPINPPKGCRFHPRCP 295
P I++ P HPYT+ L +IP D + ++ + G PP+ P GC FHPRCP
Sbjct: 237 PVHDIYKAPAHPYTRGLLESIPRLD-----QKGQELYAIKGLPPNLTRIPPGCAFHPRCP 291
Query: 296 YAKAGLCDKEEPPMVEV 312
A+ +C + PP+ +V
Sbjct: 292 MAQ-DVCRTDVPPLYDV 307
>gb|AAG10493.1|AF279106_55 (AF279106) predicted ABC transporter ATPase subunit [uncultured
proteobacterium EBAC31A08]
Length = 532
Score = 214 bits (540), Expect = 1e-54
Identities = 115/255 (45%), Positives = 163/255 (63%), Gaps = 3/255 (1%)
Query: 3 ETVLKVENLKKYFPIRGL-FRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTIL 61
E ++++ +L Y+ I F AV SF I + T GLVGESG GK+T G+ I
Sbjct: 272 EPIIEINDLNVYYSIPSTNFFKKNTFHAVKNTSFSIYKNTTIGLVGESGSGKSTLGKAIA 331
Query: 62 RLIEPTDGKIIFMGKDVTKLKGEELKWFRRKAQIMFQDPYSSLDPRQTVFQIIMEPVKFH 121
L+ G I F G+D+ +E K ++ QI+FQDPY SL PR TV +I+ E + H
Sbjct: 332 NLVS-YKGNIKFEGRDINSNSQKENKELKKNVQIVFQDPYGSLSPRMTVGEIVGEGLGVH 390
Query: 122 -GIQVDDPEEFVIRLLESVGLNEMHLYRYPHEFSGGQRQRIALARLLALKPEFIVLDEPT 180
+ + +E + ++L VG+ + +YPHEFSGGQRQRIA+AR L + P F++LDEPT
Sbjct: 391 FKLTKKERDERIDKVLSDVGIEIVAKNKYPHEFSGGQRQRIAIARSLIMNPAFMILDEPT 450
Query: 181 SALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVGPADRI 240
SALD S+Q +++ LKE+Q ++G TYLFISHDL V++ MSD I VM G++VE GP+ ++
Sbjct: 451 SALDRSIQIQVIDLLKEIQNEYGLTYLFISHDLKVIRSMSDFIFVMKNGEIVESGPSHKV 510
Query: 241 FENPLHPYTQMLFSA 255
FE+P YT+ L SA
Sbjct: 511 FESPEQDYTKKLLSA 525
Score = 177 bits (444), Expect = 2e-43
Identities = 107/269 (39%), Positives = 155/269 (56%), Gaps = 17/269 (6%)
Query: 5 VLKVENLKKYFPIR-GLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTILRL 63
+L+V +L F R GLF AVD +SF+I++ +T LVGESG GK+ T +IL+L
Sbjct: 4 ILEVSDLSINFSTRDGLFN------AVDNISFDIEKNQTLALVGESGSGKSVTAMSILQL 57
Query: 64 IEPT------DGKIIFMGKDVTKLKGEELKWFRRKA-QIMFQDPYSSLDPRQTVFQIIME 116
++ + I F G ++ K E+L R ++FQ+P +SL+P V I E
Sbjct: 58 LQKPQASYSKESSIKFNGDEIINAKYEKLLSLRGNIISMIFQEPMTSLNPYHRVGNQITE 117
Query: 117 PVKFHG-IQVDDPEEFVIRLLESVGLN--EMHLYRYPHEFSGGQRQRIALARLLALKPEF 173
+ H D + +L+ V ++ E Y YPHE SGGQRQR+ +A L KPE
Sbjct: 118 SILLHSKSSKKDAIDEAKKLMALVEIDDVERRFYAYPHELSGGQRQRVMIAMALVNKPEL 177
Query: 174 IVLDEPTSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVE 233
++ DEPT+ALDV++QA IL+ + +L+ + G + LFI+HDLG+V+ SD + VM GK+VE
Sbjct: 178 LIADEPTTALDVTIQAQILDLMSKLKNELGMSILFITHDLGLVQEFSDNVCVMKNGKIVE 237
Query: 234 VGPADRIFENPLHPYTQMLFSAIPIPDPD 262
G +F NP H YT+ L A P P D
Sbjct: 238 QGNTVEVFNNPSHEYTKKLLDAEPQPKLD 266
>pir||D72393 oligopeptide ABC transporter, ATP-binding protein - Thermotoga
maritima (strain MSB8)
>gi|4980803|gb|AAD35391.1|AE001712_4 (AE001712)
oligopeptide ABC transporter, ATP-binding protein
[Thermotoga maritima]
Length = 328
Score = 210 bits (530), Expect = 1e-53
Identities = 120/330 (36%), Positives = 190/330 (57%), Gaps = 20/330 (6%)
Query: 3 ETVLKVENLKKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTILR 62
E + ENL+ Y+ I+ +T ++AVD VS E +G+ GESGCGK+T + +
Sbjct: 2 EKIAVAENLRAYYFIKSGDKTTS-IRAVDNVSLHFFENEVYGIAGESGCGKSTLLKVLFG 60
Query: 63 LIEP----TDGKIIFM--GKD--VTKLKGEELKWFRRK-AQIMFQDPYSSLDPRQTVFQI 113
I+P DG+++F G++ + + ++LK R K + Q S L+P + + +I
Sbjct: 61 EIKPPLKLVDGEVVFKLDGEEYRINSMSLDQLKKIRWKYVSYVPQGSMSVLNPVRKIRRI 120
Query: 114 IMEPVKFH-GIQVDDPEEFVIRLLESVGLNEMHLYRYPHEFSGGQRQRIALARLLALKPE 172
++ ++ H + ++ + E++GL L YPH+ SGG RQR+ +A L P+
Sbjct: 121 FLDVIEEHTSMSREEAFSRIESYFEALGLPVRVLDSYPHQLSGGMRQRVTIALATVLNPK 180
Query: 173 FIVLDEPTSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLV 232
I DEPT+ALDV VQ ++ LK++ ++ T + ++HD+GV +++ RIGVMY G+L+
Sbjct: 181 VIFADEPTTALDVVVQRGVIQLLKKIHKEQKNTLVIVTHDMGVHAHLATRIGVMYAGRLI 240
Query: 233 EVGPADRIFENPLHPYTQMLFSAIPIPDPDLAREMKKKRMKVT-GEPPSPINPPKGCRFH 291
E IF+NPLHPYT+ L +++P R + R + T G PPS N P GC FH
Sbjct: 241 EEAETHEIFKNPLHPYTRFLINSLP-------RFGDRSRKEGTPGSPPSLANLPSGCPFH 293
Query: 292 PRCPYAKAGLCDKEEPPMVEVEKDHYVACW 321
PRCP A +C + EP ++EV ++H VACW
Sbjct: 294 PRCPIADQ-ICMEMEPDLIEVARNHKVACW 322
>emb|CAC11410.1| (AL445063) probable sporulation protein (spo0KD) [Thermoplasma
acidophilum]
Length = 321
Score = 210 bits (530), Expect = 1e-53
Identities = 118/311 (37%), Positives = 184/311 (58%), Gaps = 19/311 (6%)
Query: 25 GWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTILRLIEP---TDGKIIFMGKDVTKL 81
G K +D ++ +I +GE LVGES GK+T G+ I R++ P T G+++ G DV KL
Sbjct: 17 GKYKVIDDLNLDIDQGELVSLVGESASGKSTLGQVISRMLPPVGITSGEVVLDGVDVLKL 76
Query: 82 KGEELKWFRRKAQIM-FQDPYSSLDPRQTVFQIIMEPVKFHGIQV------DDPEEFVIR 134
+E+ R M FQ+P +SL+P + + + +ME + ++ ++ + VI+
Sbjct: 77 SEKEMTKIRGTTVFMIFQNPLNSLNPVKRIEEQLMEALAIRNSRMNIQMTFEEARKEVIK 136
Query: 135 LLESVGLN--EMHLYRYPHEFSGGQRQRIALARLLALKPEFIVLDEPTSALDVSVQANIL 192
LES+ L E L RYPHE SGGQ QR+ + L L+P+ ++ DEPT+ALDV++QA ++
Sbjct: 137 ALESLRLPDPEKILIRYPHELSGGQVQRVVICMALLLRPKLLIADEPTTALDVTIQAQVV 196
Query: 193 NTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVGPADRIFENPLHPYTQML 252
LK+L T +FI+HD+G+ +SDR+ V Y G+++E G I +NPLHPYT L
Sbjct: 197 KLLKDLNRDTKMTIIFITHDVGLAYVLSDRMLVFYAGRVMEQGQTVEIVKNPLHPYTSGL 256
Query: 253 FSAIPIPDPDLAREMKKKRMKVTGEPPSPINPPKGCRFHPRCPYAKAGLCDKEEPPMVEV 312
++IP + + K + G PPS ++ PKGC+F PRC +A C +EEP ++
Sbjct: 257 LASIP-----SSPKHSGKLYSIPGYPPSYLSLPKGCKFAPRCRFA-FERCFEEEPSYIK- 309
Query: 313 EKDHYVACWLY 323
+ + + CWLY
Sbjct: 310 KDNRLIRCWLY 320
>dbj|BAB07359.1| (AP001519) oligopeptide ABC transporter (ATP-binding protein)
[Bacillus halodurans]
Length = 340
Score = 209 bits (527), Expect = 3e-53
Identities = 124/330 (37%), Positives = 190/330 (57%), Gaps = 20/330 (6%)
Query: 3 ETVLKVENLKKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTILR 62
+ +L++ NL F I+ F AVD V+ + + E +VGESG GK+ TI+
Sbjct: 4 KALLQIRNLTTAFQIKDDFYA-----AVDNVTLNVNKNEVLAIVGESGSGKSALANTIMG 58
Query: 63 LIEPT----DGKIIFMGKDVTKLKGEELKWFRR-KAQIMFQDPYSSLDPRQTVFQIIMEP 117
L P +G+I F G+++ KL +L R K ++FQDP ++L+P + + I E
Sbjct: 59 LHNPERTKIEGEINFKGENLVKLPVSKLNKIRGDKLSMIFQDPLTALNPLMIIGEQIGEA 118
Query: 118 VKFH-GIQVDDPEEFVIRLLESVGLN--EMHLYRYPHEFSGGQRQRIALARLLALKPEFI 174
+ H + + ++ VI LL VG+ E +YPHE SGG RQR+ +A +A +PEF+
Sbjct: 119 LLLHRSLTKAERKKKVIDLLNLVGIPRPESTYEQYPHELSGGMRQRVMIAAAIACEPEFL 178
Query: 175 VLDEPTSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEV 234
+ DEPT+ALDV++QA IL+ +++L+EK + I+HDLGVV M+DR+ VMY G++VE+
Sbjct: 179 IADEPTTALDVTIQAQILDLIRDLKEKIHAGIILITHDLGVVAEMADRVAVMYAGQIVEI 238
Query: 235 GPADRIFENPLHPYTQMLFSAIPIPDPDLAREMKKKRMKVTGEPPSPIN-PPKGCRFHPR 293
+FE PLHPYT+ L +++P D ++K + G P+ N P KGCRF R
Sbjct: 239 ADVFTLFERPLHPYTRSLLNSVPSESND-----QEKLHVIQGIVPALQNLPRKGCRFKDR 293
Query: 294 CPYAKAGLCDKEEPPMVEVEKDHYVACWLY 323
P+ ++ P + EVE H+V C Y
Sbjct: 294 IPWLSES-AHEDHPELHEVEPGHFVRCTCY 322
>pir||T03432 probable transport protein accC - Agrobacterium tumefaciens plasmid
pTiC58 >gi|3153179|gb|AAC17199.1| (AF010180) AccC
[Agrobacterium tumefaciens]
Length = 338
Score = 208 bits (525), Expect = 6e-53
Identities = 115/308 (37%), Positives = 178/308 (57%), Gaps = 7/308 (2%)
Query: 1 MTETVLKVENLKKYFPIR-GLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRT 59
M+ +L+ + K F ++ GLF AV+ + E+ E G+VGESG GK+T GR
Sbjct: 1 MSAPLLQARGVTKVFRLKSGLFVKPSVHVAVNSIDLELAPRERVGVVGESGSGKSTLGRL 60
Query: 60 ILRLIEPTDGKIIFMGKDVTKLKGEELKWFRRKAQIMFQDPYSSLDPRQTVFQIIMEPVK 119
+L L T+G+++F G T + FR++ ++ Q+P S+L+P+ T+ + I E V
Sbjct: 61 LLGLTSTTEGEVLFEGLAHTDRSARDWSTFRKETSLVQQNPLSALNPQMTIGEQIAEAVW 120
Query: 120 FHGIQVDDPEEFVIRLLESVGLNEMHLYRYPHEFSGGQRQRIALARLLALKPEFIVLDEP 179
H + + +L+ VGL+ + RYPH+ SGGQRQR+ +AR L L P+ +V DE
Sbjct: 121 VHRVANAGARDRAATMLDRVGLSSAMMNRYPHQMSGGQRQRVVIARALILDPKLVVFDEA 180
Query: 180 TSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVGPADR 239
SALDVSVQA ++ L++L ++ Y+FI+HDL +V+++ DRI VMYLG++VE G
Sbjct: 181 VSALDVSVQAQVVALLRQLWQELDLAYVFITHDLRIVRHLVDRIVVMYLGRVVETGDIKS 240
Query: 240 IFENPLHPYTQMLFSAIPIPDPDLAREMKKKRMKVTGEPPSPINPPKGCRFHPRCPYAKA 299
++ P HPYT+ L +++P DP ++ + GE + GC F RCP+A
Sbjct: 241 VYAWPRHPYTRALLASVPTMDP----TVRNIEPPIKGELDAG-KVMTGCAFRSRCPFA-I 294
Query: 300 GLCDKEEP 307
C KE P
Sbjct: 295 ERCAKETP 302
>dbj|BAB07365.1| (AP001519) oligopeptide ABC transporter (ATP-binding protein)
[Bacillus halodurans]
Length = 329
Score = 207 bits (521), Expect = 2e-52
Identities = 118/332 (35%), Positives = 184/332 (54%), Gaps = 20/332 (6%)
Query: 1 MTETVLKVENLKKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTI 60
M + VL+++ L+ +F F G V AVDGVS + +GE G+VGESGCGK+ T +I
Sbjct: 1 MPDVVLELDKLRTHF-----FTDQGEVPAVDGVSLRLHQGEIIGIVGESGCGKSVTSLSI 55
Query: 61 LRLIEPTDGKII-----FMGKDVTKLKGEELKWFR-RKAQIMFQDPYSSLDPRQTVFQII 114
++L+ GKI+ F G+D+ ++ + +K R ++FQ+P +SL+P T+ +
Sbjct: 56 MQLVPNPPGKIMSGHVYFKGEDLVQVSPKRMKQIRGNDIAMIFQEPMTSLNPLFTIGNQL 115
Query: 115 MEPVKFHG-IQVDDPEEFVIRLLESVGLNEMH--LYRYPHEFSGGQRQRIALARLLALKP 171
+E ++ H + + + + +LE VG+ YPH+ SGG RQR+ +A + P
Sbjct: 116 IEAIRNHRKMTKQEARKQAVTMLERVGIPRADEIASEYPHQLSGGMRQRVMIAMAMCCDP 175
Query: 172 EFIVLDEPTSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKL 231
+ ++ DEPT+ALDV++QA IL+ ++ L E H L I+HDLGVV + +R+ VMY G++
Sbjct: 176 KVLIADEPTTALDVTIQAQILDLMRHLNEAHDTAILLITHDLGVVAELCNRVVVMYAGQV 235
Query: 232 VEVGPADRIFENPLHPYTQMLFSAIPIPDPDLAREMKKKRMKVTGEPPSPINPPKGCRFH 291
VE G I ++P HPYT+ L ++P E K+ + G P P GCRF
Sbjct: 236 VEEGDVRMILKHPKHPYTKGLLKSLP-----KIHEQSKRLYSIPGVVPKPGTVGHGCRFA 290
Query: 292 PRCPYAKAGLCDKEEPPMVEVEKDHYVACWLY 323
RC A C P + +V H C+LY
Sbjct: 291 ARCEVA-FERCKTTAPQLQQVATGHQCRCFLY 321
>sp|P04285|OPPD_SALTY OLIGOPEPTIDE TRANSPORT ATP-BINDING PROTEIN OPPD
>gi|47805|emb|CAA29042.1| (X05491) Opp D (AA1-335)
[Salmonella typhimurium]
Length = 335
Score = 203 bits (511), Expect = 2e-51
Identities = 116/305 (38%), Positives = 181/305 (59%), Gaps = 16/305 (5%)
Query: 25 GWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTILRLIEPTDGKI----IFMGKDVTK 80
G V AV+ ++F ++ GET G+VGESG GK+ T ++ L+ T+G+I F G+++
Sbjct: 32 GDVTAVNDLNFTLRAGETLGIVGESGSGKSQTAFALMGLLA-TNGRIGGSATFNGREILN 90
Query: 81 LKGEELKWFR-RKAQIMFQDPYSSLDPRQTVFQIIMEPVKFH-GIQVDDPEEFVIRLLES 138
L EL R + ++FQDP +SL+P V + +ME + H G+ + E +R+L++
Sbjct: 91 LPERELNTLRAEQISMIFQDPMTSLNPYMRVGEQLMEVLMLHKGMSKAEAFEESVRMLDA 150
Query: 139 VGLNEMH--LYRYPHEFSGGQRQRIALARLLALKPEFIVLDEPTSALDVSVQANILNTLK 196
V + E + YPHEFSGG RQR+ +A L +P+ ++ DEPT+ALDV+VQA I+ L
Sbjct: 151 VKMPEARKRMKMYPHEFSGGMRQRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLN 210
Query: 197 ELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVGPADRIFENPLHPYTQMLFSAI 256
EL+ + + I+HDLGVV + D++ VMY G+ +E G A +F P+HPY+ L +A+
Sbjct: 211 ELKREFNTAIIMITHDLGVVAGICDKVLVMYAGRTMEYGKARDVFYQPVHPYSIGLLNAV 270
Query: 257 PIPDPDLAREMKKKRMKVTGEPPSPINPPKGCRFHPRCPYAKAGLCDKEEPPMVEVEKDH 316
P D + A + + + G PP+ + PKGC F PRCP+A +C+ PP+
Sbjct: 271 PRLDSEGA-----EMLTIPGNPPNLLRLPKGCPFQPRCPHAME-ICN-NAPPLEAFSPGR 323
Query: 317 YVACW 321
AC+
Sbjct: 324 LRACF 328
>pir||QREBOT oligopeptide transport protein oppD - Salmonella typhimurium
Length = 335
Score = 200 bits (503), Expect = 2e-50
Identities = 118/306 (38%), Positives = 182/306 (58%), Gaps = 18/306 (5%)
Query: 25 GWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTILRLIEPTDGKI----IFMGKDVTK 80
G V AV+ ++F ++ GET G+VGESG GK+ + ++ L+ T+G+I F G+++
Sbjct: 32 GDVTAVNDLNFTLRAGETLGIVGESGSGKSQSRLRLMGLLA-TNGRIGGSATFNGREILN 90
Query: 81 LKGEELKWFRRKAQI--MFQDPYSSLDPRQTVFQIIMEPVKFH-GIQVDDPEEFVIRLLE 137
L EL RR QI +FQDP +SL+P V + +ME + H G+ + E +R+L+
Sbjct: 91 LPERELNT-RRAEQISMIFQDPMTSLNPYMRVGEQLMEVLMLHKGMSKAEAFEESVRMLD 149
Query: 138 SVGLNEMH--LYRYPHEFSGGQRQRIALARLLALKPEFIVLDEPTSALDVSVQANILNTL 195
+V + E + YPHEFSGG RQR+ +A L +P+ ++ DEPT+ALDV+VQA I+ L
Sbjct: 150 AVKMPEARKRMKMYPHEFSGGMRQRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLL 209
Query: 196 KELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVGPADRIFENPLHPYTQMLFSA 255
EL+ + + I+HDLGVV + D++ VMY G+ +E G A +F P+HPY+ L +A
Sbjct: 210 NELKREFNTAIIMITHDLGVVAGICDKVLVMYAGRTMEYGKARDVFYQPVHPYSIGLLNA 269
Query: 256 IPIPDPDLAREMKKKRMKVTGEPPSPINPPKGCRFHPRCPYAKAGLCDKEEPPMVEVEKD 315
+P D + A + + + G PP+ + PKGC F PRCP+A +C+ PP+
Sbjct: 270 VPRLDSEGA-----EMLTIPGNPPNLLRLPKGCPFQPRCPHAME-ICN-NAPPLEAFSPG 322
Query: 316 HYVACW 321
AC+
Sbjct: 323 RLRACF 328
>pir||F71483 probable dipeptide transport - Chlamydia trachomatis (serotype D,
strain UW3/Cx) >gi|3329143|gb|AAC68285.1| (AE001339) ABC
Transport ATPase [Chlamydia trachomatis]
Length = 321
Score = 199 bits (501), Expect = 4e-50
Identities = 110/303 (36%), Positives = 174/303 (57%), Gaps = 15/303 (4%)
Query: 29 AVDGVSFEIKRGETFGLVGESGCGKTTTGRTILRLIEPTD----GKIIFMGKDVTKLKGE 84
AVD +SF++ G+T ++GESG GK+ T +++++L+ + G+ +F +++ K
Sbjct: 25 AVDSLSFDVFPGQTLAIIGESGSGKSITAQSLMQLLPEENFSLSGEALFNKENLLDRKNT 84
Query: 85 ELK-WFRRKAQIMFQDPYSSLDPRQTVFQIIMEPVKFH-GIQVDDPEEFVIRLLESVGLN 142
K F K ++FQ+P +S DP T+ Q E ++ H GI E ++ +L G
Sbjct: 85 NAKVLFGSKISMIFQNPLASFDPVFTIEQQFHEVIRTHLGISNKMAHEQMLAVLRETGFQ 144
Query: 143 --EMHLYRYPHEFSGGQRQRIALARLLALKPEFIVLDEPTSALDVSVQANILNTLKELQE 200
E + YPHE SGG QR+A+A L P+ ++ DEPT+ALDVSVQ IL LK LQ+
Sbjct: 145 DPERCIKLYPHELSGGMLQRMAIAMTLLTSPDLLIADEPTTALDVSVQYQILQLLKTLQK 204
Query: 201 KHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVGPADRIFENPLHPYTQMLFSAIPIPD 260
K G + L I+HD+GVV M+D + V+Y G++ E IF +P HPYT+ L ++ P
Sbjct: 205 KTGMSLLIITHDMGVVAEMADDVFVLYAGRMAEYSSVQEIFHSPAHPYTEDLLASRP--- 261
Query: 261 PDLAREMKKKRMKVTGEPPSPINPPKGCRFHPRCPYAKAGLCDKEEPPMVEVEKDHYVAC 320
++ ++ + + G+PP + PKGC + PRC A+ +C ++ P + + H V C
Sbjct: 262 ---SQYRQQTFVPIAGQPPHYTSLPKGCCYSPRCRKAQP-ICFEKSPDSLSLNDHHRVRC 317
Query: 321 WLY 323
WLY
Sbjct: 318 WLY 320
>pir||T35982 probable peptide transport ATP-binding protein - Streptomyces
coelicolor >gi|4464267|emb|CAB37470.1| (AL035559)
putative peptide transport ATP-binding protein
[Streptomyces coelicolor A3(2)]
Length = 398
Score = 199 bits (500), Expect = 5e-50
Identities = 124/323 (38%), Positives = 168/323 (51%), Gaps = 19/323 (5%)
Query: 4 TVLKVENLKKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTILRL 63
++L+V +LK +P G AV GV + GE G+ GESGCGK+T +LRL
Sbjct: 2 SLLEVRDLKVTYP--------GGAAAVRGVDLTLAAGEKLGVAGESGCGKSTLALALLRL 53
Query: 64 IEP---TDGKIIFMGKDVTKLKGEELKWFR-RKAQIMFQDPYSSLDPRQTVFQIIMEPVK 119
+ P G+I+ G+DV +K ++ R A I+FQ SL+ V I EP+
Sbjct: 54 LPPGARVGGEILLDGEDVLTMKWGRVRAVRWAGASIVFQGAMHSLNAVHRVGDQIAEPIL 113
Query: 120 FHG-IQVDDPEEFVIRLLESVGLNEMHLYRYPHEFSGGQRQRIALARLLALKPEFIVLDE 178
H LLE VGL YPHE SGGQRQR+ +A LA P IV DE
Sbjct: 114 LHRRTTAAGARRRAGELLEQVGLPAARASAYPHELSGGQRQRVMIAMALACDPRLIVADE 173
Query: 179 PTSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVGPAD 238
PT+ALDV +QA IL ++ L + + ISHDL V+ DR+ VMY G++VE GPA
Sbjct: 174 PTTALDVMIQAQILRLIEGLVGEQDVGLIMISHDLAVLADTCDRLAVMYAGRVVEEGPAR 233
Query: 239 RIFENPLHPYTQMLFSAIP-IPDPDLAREMKKKRMKVTGEPPSPINPPKGCRFHPRCPYA 297
+++++ HPY + L A P I DP + + G+PP P P GC FHPRCP A
Sbjct: 234 QVYDDARHPYGRALSEAFPTIGDP----ASRFAPRGLPGDPPDPAAVPSGCAFHPRCPVA 289
Query: 298 KAGLCDKEEPPMVEVEKDHYVAC 320
LC ++ P+ + AC
Sbjct: 290 -LDLCATQDQPLRDAGARRRAAC 311
>gi|10954942 Probable accC [Agrobacterium tumefaciens]
>gi|6498295|dbj|BAA87747.1| (AB016260) Probable accC
[Agrobacterium tumefaciens]
Length = 339
Score = 198 bits (499), Expect = 6e-50
Identities = 112/309 (36%), Positives = 176/309 (56%), Gaps = 8/309 (2%)
Query: 1 MTETVLKVENLKKYFPIR-GLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRT 59
M+ +L+ + K F ++ GLF AV+ + E+ E +V ESG GK+T GR
Sbjct: 1 MSAPLLQARGVTKVFRLKSGLFVKPSVHVAVNSIDLELAPRERVSVVRESGSGKSTLGRL 60
Query: 60 ILRLIEPTDGKIIFMGKDVTKLKGEELKWFRRKAQIMFQDPYSSLDPRQTVFQIIMEPVK 119
+L L T+G+++F G T + FR++ ++ Q+P S+L+P+ T+ + I E V
Sbjct: 61 LLGLTSTTEGEVLFEGLAHTDRSARDWSTFRKETSLVQQNPLSALNPQMTIGEQIAEAVW 120
Query: 120 FHGI-QVDDPEEFVIRLLESVGLNEMHLYRYPHEFSGGQRQRIALARLLALKPEFIVLDE 178
H + + +L+ VGL+ + RYPH+ SGGQRQR+ +AR L L P+ ++ DE
Sbjct: 121 VHRVANRAGARDRAATMLDRVGLSSAMMNRYPHQMSGGQRQRVVIARALILDPKLVIFDE 180
Query: 179 PTSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVGPAD 238
SALDVSVQA ++ L++L ++ Y+FI+HDL +V+++ DRI VMYLG++VE G
Sbjct: 181 AVSALDVSVQAQVVALLRQLWQELDLAYVFITHDLRIVRHLVDRIVVMYLGRVVETGDIK 240
Query: 239 RIFENPLHPYTQMLFSAIPIPDPDLAREMKKKRMKVTGEPPSPINPPKGCRFHPRCPYAK 298
++ P HPYT+ L +++P DP ++ + GE + GC F RCP+A
Sbjct: 241 SVYAWPRHPYTRALLASVPTMDP----TVRNIEPPIKGELDAG-KVMTGCAFRSRCPFA- 294
Query: 299 AGLCDKEEP 307
C KE P
Sbjct: 295 IERCAKETP 303
>pir||F72049 peptide ABC transporter, ATP-binding protein CP0065 [imported] -
Chlamydophila pneumoniae (strains CWL029 and AR39)
>gi|4376983|gb|AAD18821.1| (AE001650) ABC ATPase
Dipeptide Transport [Chlamydophila pneumoniae CWL029]
>gi|7189002|gb|AAF37954.1| (AE002170) peptide ABC
transporter, ATP-binding protein [Chlamydophila
pneumoniae AR39] >gi|8979054|dbj|BAA98889.1| (AP002547)
ABC ATPase dipeptide transport [Chlamydophila pneumoniae
J138]
Length = 324
Score = 198 bits (498), Expect = 8e-50
Identities = 112/302 (37%), Positives = 167/302 (55%), Gaps = 13/302 (4%)
Query: 30 VDGVSFEIKRGETFGLVGESGCGKTTTGRTILRLIE----PTDGKIIFMGKDV-TKLKGE 84
V +SF I G+T ++GESG GK+ + ILRL+ G++ F G ++ T +
Sbjct: 26 VQSLSFTINEGQTLAIIGESGSGKSVSAHAILRLLPCPPFSVSGQVNFQGHNLLTASRSI 85
Query: 85 ELKWFRRKAQIMFQDPYSSLDPRQTVFQIIMEPVKFH-GIQVDDPEEFVIRLLESVGLNE 143
+ K + ++FQ+P +SL+P T+ Q E + H + + +E ++ LE G ++
Sbjct: 86 QKKIIGTEISMIFQNPQASLNPVFTIEQQFREIIHTHLALTAEVAKEKMLYALEETGFHD 145
Query: 144 --MHLYRYPHEFSGGQRQRIALARLLALKPEFIVLDEPTSALDVSVQANILNTLKELQEK 201
+ L YPH+ SGG QRI +A L P+ ++ DEPT+ALDVSVQ IL LK LQ+K
Sbjct: 146 PRLCLNLYPHQLSGGMLQRICIAMALLCSPKLLIADEPTTALDVSVQYQILQLLKTLQKK 205
Query: 202 HGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVGPADRIFENPLHPYTQMLFSAIPIPDP 261
G + L I+H++GVV +D + V+Y G++VE PA ++F NP HPYT+ L ++ P P
Sbjct: 206 TGMSLLIITHNMGVVAETADDVLVLYAGRMVECAPAVQMFHNPSHPYTRDLLASRPSLQP 265
Query: 262 DLAREMKKKRMKVTGEPPSPINPPKGCRFHPRCPYAKAGLCDKEEPPMVEVEKDHYVACW 321
+ G+PP P GCR+HPRC C E P + V + H V CW
Sbjct: 266 QQLGSFN----PIPGQPPHYTAFPSGCRYHPRCSKI-LNRCSAEAPEIYPVREGHKVRCW 320
Query: 322 LY 323
LY
Sbjct: 321 LY 322
>gb|AAD48154.1|AF086618_1 (AF086618) ABC transporter homolog [Loofah witches'-broom
phytoplasma]
Length = 315
Score = 198 bits (498), Expect = 8e-50
Identities = 110/260 (42%), Positives = 172/260 (65%), Gaps = 10/260 (3%)
Query: 3 ETVLKVENLKKYFPIRGLF-RTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTIL 61
+ +++ +NL K+F + LF ++ ++KA D +S I +G+T +VG G GK+T G+T+L
Sbjct: 10 QILIECKNLSKFFFRKKLFAKSSIFLKANDDISLSIHKGQTLAVVG--GSGKSTLGQTLL 67
Query: 62 RLIEPTDGKIIFMGKDVTKLKGEELKWFRRKAQIMFQDPYSSLDPRQTVFQIIMEPVKFH 121
+L + T GK+I+ K+ + EL + QI+FQ+PY SL+P+ + II E + H
Sbjct: 68 QLEKSTSGKVIYY-KEQQSINLSELS--TKDLQIIFQNPYLSLNPKILISDIIGEGLLIH 124
Query: 122 GI--QVDDP--EEFVIRLLESVGLNEMHLYRYPHEFSGGQRQRIALARLLALKPEFIVLD 177
+ +DP ++ ++ +++ G+ E R + SGG+RQRIA+AR L ++P+FIV D
Sbjct: 125 NLVKSKNDPLYKQKILDIMKKCGVKEELYNRSLAQLSGGERQRIAIARTLIIEPKFIVCD 184
Query: 178 EPTSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVGPA 237
E S LDV++Q IL LK+L++ + T LFI+HDLGV KY+SD+I +MYLGKLVE+GP
Sbjct: 185 EIVSLLDVTIQKQILELLKQLKKNYELTLLFITHDLGVAKYLSDQIAIMYLGKLVELGPT 244
Query: 238 DRIFENPLHPYTQMLFSAIP 257
++IF NP HPYT L ++IP
Sbjct: 245 EKIFTNPQHPYTIELLNSIP 264
>sp|P45052|OPPD_HAEIN OLIGOPEPTIDE TRANSPORT ATP-BINDING PROTEIN OPPD
>gi|1075084|pir||C64184 oligopeptide transport
ATP-binding protein oppD - Haemophilus influenzae
(strain Rd KW20) >gi|1574676|gb|AAC22775.1| (U32792)
oligopeptide ABC transporter, ATP-binding protein (oppD)
[Haemophilus influenzae Rd]
Length = 323
Score = 197 bits (496), Expect = 1e-49
Identities = 112/308 (36%), Positives = 175/308 (56%), Gaps = 14/308 (4%)
Query: 25 GWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTILRLIEPT---DGKIIFMGKDVTKL 81
G V AV+ ++F + G T G+VGESG GK+ T ++ L+ +G IF GK++ L
Sbjct: 19 GVVTAVNDLNFTLNAGSTLGIVGESGSGKSQTAFALMGLLAANGEVEGSAIFEGKELVNL 78
Query: 82 KGEELKWFR-RKAQIMFQDPYSSLDPRQTVFQIIMEPVKFH-GIQVDDPEEFVIRLLESV 139
EL R + ++FQDP +SL+P + + +ME ++ H G +++L++V
Sbjct: 79 PNAELNKIRAEQISMIFQDPMTSLNPYMKIGEQLMEVLQLHKGYDKQTAFAESVKMLDAV 138
Query: 140 GLNEM--HLYRYPHEFSGGQRQRIALARLLALKPEFIVLDEPTSALDVSVQANILNTLKE 197
+ E + YPHEFSGG RQR+ +A L +P+ ++ DEPT+ALDV+VQA I+ L E
Sbjct: 139 KMPEAKKRMGMYPHEFSGGMRQRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNE 198
Query: 198 LQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVGPADRIFENPLHPYTQMLFSAIP 257
L+ + + I+HDLGVV + D++ VMY G+ +E G A++IF +P HPY+ L AIP
Sbjct: 199 LKREFNTAIIMITHDLGVVAGICDQVMVMYAGRTMEYGTAEQIFYHPTHPYSIGLMDAIP 258
Query: 258 IPDPDLAREMKKKRMKVTGEPPSPINPPKGCRFHPRCPYAKAGLCDKEEPPMVEVEKDHY 317
D + ++ + + G PP+ ++ PKGC F PRC +A + P +
Sbjct: 259 RLDGN-----EEHLVTIPGNPPNLLHLPKGCPFSPRCQFATEQC--QIAPKLTTFNHGQL 311
Query: 318 VACWLYAK 325
CWL A+
Sbjct: 312 RNCWLSAE 319
>gb|AAK42790.1| ABC transporter, ATP binding protein [Sulfolobus solfataricus]
Length = 324
Score = 197 bits (495), Expect = 2e-49
Identities = 114/305 (37%), Positives = 181/305 (58%), Gaps = 20/305 (6%)
Query: 29 AVDGVSFEIKRGETFGLVGESGCGKTTTGRTILRLIEPTDGKIIFMGKDVTKLKGEELKW 88
A+ VS + +G+ ++GESG GKTT GR I+ L +PT G++++ G ++ K K + K
Sbjct: 27 ALKDVSLSMNQGDLLIVLGESGAGKTTLGRVIVGLQKPTSGEVVYDGYNIWKNKRKIFKK 86
Query: 89 FRRKAQIMFQDPYSSLDPRQTVFQIIMEPV-KFHGIQVDDPEEFVIRLLESVGLN--EMH 145
+R+ Q++ QDPYS+L +TV +I++ P+ ++ I D+ + +I LLE V L E
Sbjct: 87 YRKDVQLIPQDPYSTLPFNKTVEEILVAPILRWEKINKDELRKRLINLLELVKLTPAEEF 146
Query: 146 LYRYPHEFSGGQRQRIALARLLALKPEFIVLDEPTSALDVSVQANILNTLKELQEKHGFT 205
L +YPH+ SGGQ+QR+++AR L++ P IV DEP + +D S++ ILNTL E++ + T
Sbjct: 147 LGKYPHQLSGGQKQRLSIARSLSVNPRIIVADEPVTMVDASLRIGILNTLAEIKNRLNLT 206
Query: 206 YLFISHDLGVVKYM-----SDRIGVMYLGKLVEVGPADRIFENPLHPYTQMLFSAIPIPD 260
+FI+HD+ + +Y VM+ G++VE + I ++PLHPYT L P D
Sbjct: 207 MVFITHDIPIARYFYHLFDKGNTIVMFAGRIVERADLEEILKDPLHPYTNDLIKLTPSID 266
Query: 261 PDLAREMKKKRMKVTGEPPSPINPPKGCRFHPRCPYAKAGLCDKEEPPMVEVEKDHYVAC 320
+L +E+ +K+ E KGC + RCP+A +C EEP + + H VAC
Sbjct: 267 -NLYKEI---NVKINYE-----RVEKGCPYRLRCPFA-MDICKNEEPKLFKY--SHEVAC 314
Query: 321 WLYAK 325
+LY K
Sbjct: 315 FLYGK 319
>dbj|BAA14778.1| (D90763) Oligopeptide transport ATP-binding protein OppD.
[Escherichia coli] >gi|1805527|dbj|BAA16041.1| (D90852)
Oligopeptide transport ATP-binding protein OppD.
[Escherichia coli]
Length = 337
Score = 196 bits (494), Expect = 2e-49
Identities = 112/304 (36%), Positives = 174/304 (56%), Gaps = 14/304 (4%)
Query: 25 GWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTILRLIEPTD---GKIIFMGKDVTKL 81
G V AV+ ++F ++ GET G+VGESG GK+ T ++ L+ G F G+++ L
Sbjct: 34 GDVTAVNDLNFSLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGREILNL 93
Query: 82 KGEELKWFR-RKAQIMFQDPYSSLDPRQTVFQIIMEPVKFH-GIQVDDPEEFVIRLLESV 139
EL R + ++FQDP +SL+P V + +ME + H + + E +R+L++V
Sbjct: 94 PEHELNKLRAEQISMIFQDPMTSLNPYMRVGEQLMEVLMLHKNMSKAEAFEESVRMLDAV 153
Query: 140 GLNEMH--LYRYPHEFSGGQRQRIALARLLALKPEFIVLDEPTSALDVSVQANILNTLKE 197
+ E + YPHEFSGG RQR+ +A L +P+ ++ DEPT+ALDV+VQA I+ L E
Sbjct: 154 KMPEARKRMKMYPHEFSGGMRQRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNE 213
Query: 198 LQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVGPADRIFENPLHPYTQMLFSAIP 257
L+ + + I+HDL VV + D++ VMY G+ +E G A +F P+HPY+ L +A+P
Sbjct: 214 LKREFNTAIIMITHDLVVVAGICDKVLVMYAGRTMEYGNARDVFYQPVHPYSIGLLNAVP 273
Query: 258 IPDPDLAREMKKKRMKVTGEPPSPINPPKGCRFHPRCPYAKAGLCDKEEPPMVEVEKDHY 317
D + + + + G PP+ + PKGC F PRCP+A +C PP+ E
Sbjct: 274 RLDAE-----GETMLTIPGNPPNLLRLPKGCPFQPRCPHAME-IC-SSAPPLEEFTPGRL 326
Query: 318 VACW 321
AC+
Sbjct: 327 RACF 330
>sp|P76027|OPPD_ECOLI OLIGOPEPTIDE TRANSPORT ATP-BINDING PROTEIN OPPD
>gi|7442530|pir||A64872 oligopeptide transport
ATP-binding protein oppD - Escherichia coli
>gi|1787499|gb|AAC74328.1| (AE000223) homolog of
Salmonella ATP-binding protein of oligopeptide ABC
transport system [Escherichia coli K12]
Length = 337
Score = 196 bits (494), Expect = 2e-49
Identities = 112/304 (36%), Positives = 174/304 (56%), Gaps = 14/304 (4%)
Query: 25 GWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTILRLIEPTD---GKIIFMGKDVTKL 81
G V AV+ ++F ++ GET G+VGESG GK+ T ++ L+ G F G+++ L
Sbjct: 34 GDVTAVNDLNFSLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGREILNL 93
Query: 82 KGEELKWFR-RKAQIMFQDPYSSLDPRQTVFQIIMEPVKFH-GIQVDDPEEFVIRLLESV 139
EL R + ++FQDP +SL+P V + +ME + H + + E +R+L++V
Sbjct: 94 PEHELNKLRAEQISMIFQDPMTSLNPYMRVGEQLMEVLMLHKNMSKAEAFEESVRMLDAV 153
Query: 140 GLNEMH--LYRYPHEFSGGQRQRIALARLLALKPEFIVLDEPTSALDVSVQANILNTLKE 197
+ E + YPHEFSGG RQR+ +A L +P+ ++ DEPT+ALDV+VQA I+ L E
Sbjct: 154 KMPEARKRMKMYPHEFSGGMRQRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNE 213
Query: 198 LQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVGPADRIFENPLHPYTQMLFSAIP 257
L+ + + I+HDL VV + D++ VMY G+ +E G A +F P+HPY+ L +A+P
Sbjct: 214 LKREFNTAIIMITHDLVVVAGICDKVLVMYAGRTMEYGNARDVFYQPVHPYSIGLLNAVP 273
Query: 258 IPDPDLAREMKKKRMKVTGEPPSPINPPKGCRFHPRCPYAKAGLCDKEEPPMVEVEKDHY 317
D + + + + G PP+ + PKGC F PRCP+A +C PP+ E
Sbjct: 274 RLDAE-----GETMLTIPGNPPNLLRLPKGCPFQPRCPHAME-IC-SSAPPLEEFTPGRL 326
Query: 318 VACW 321
AC+
Sbjct: 327 RACF 330
>sp|P18765|AMIE_STRPN OLIGOPEPTIDE TRANSPORT ATP-BINDING PROTEIN AMIE
>gi|98018|pir||S11152 oligopeptide transport protein
amiE - Streptococcus pneumoniae
>gi|47346|emb|CAA35216.1| (X17337) AmiE protein
[Streptococcus pneumoniae]
Length = 355
Score = 195 bits (491), Expect = 5e-49
Identities = 116/303 (38%), Positives = 171/303 (56%), Gaps = 15/303 (4%)
Query: 29 AVDGVSFEIKRGETFGLVGESGCGKTTTGRTILRLIEPT----DGKIIFMGKDVTKLKGE 84
A+ GVS E+ GE LVGESG GK+ +T ++E +G I + G+D+T L
Sbjct: 27 AIRGVSLELVEGEVLALVGESGSGKSVLTKTFRGMLEENGRIAEGSIDYRGQDLTALSSH 86
Query: 85 ELKWFRRKAQI--MFQDPYSSLDPRQTVFQIIMEP-VKFHGIQVDDPEEFVIRLLESVGL 141
+ R A+I +FQDP +SLDP +T+ I E VK G + +E I + VG+
Sbjct: 87 KDWEQIRGAKIATIFQDPMTSLDPIKTIGSQITEVIVKHQGKTAKEAKELAIDYMNKVGI 146
Query: 142 NEM--HLYRYPHEFSGGQRQRIALARLLALKPEFIVLDEPTSALDVSVQANILNTLKELQ 199
+ YP ++SGG RQRI +A LA +P+ ++ DEPT+ALDV++QA I++ LK LQ
Sbjct: 147 PDADRRFNEYPFQYSGGMRQRIVIAIALACRPDVLICDEPTTALDVTIQAQIIDLLKSLQ 206
Query: 200 EKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVGPADRIFENPLHPYTQMLFSAIPIP 259
++ FT +FI+HDLGVV ++D++ VMY G++VE G + +F +P HPYT L S++P
Sbjct: 207 NEYHFTTIFITHDLGVVASIADKVAVMYAGEIVEYGTVEEVFYDPRHPYTWSLLSSLPQL 266
Query: 260 DPDLAREMKKKRMKVTGEPPSPINPPKGCRFHPRCPYAKAGLCDKEEPPMVEVEKDHYVA 319
D K + G PPS KG F R YA + +++ P V + H+
Sbjct: 267 ADD-----KGDLYSIPGTPPSLYTDLKGDAFALRSDYAMQ-IDFEQKAPQFSVSETHWAK 320
Query: 320 CWL 322
WL
Sbjct: 321 TWL 323
>pir||E82242 oligopeptide ABC transporter, ATP-binding protein VC1094 [imported]
- Vibrio cholerae (group O1 strain N16961)
>gi|9655563|gb|AAF94253.1| (AE004190) oligopeptide ABC
transporter, ATP-binding protein [Vibrio cholerae]
Length = 324
Score = 195 bits (490), Expect = 7e-49
Identities = 121/326 (37%), Positives = 183/326 (56%), Gaps = 20/326 (6%)
Query: 4 TVLKVENLKKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTILRL 63
++L V++L+ F + G V AV+ ++F +K+GET G+VGESG GK+ T I+ L
Sbjct: 3 SLLDVKDLRVEFSTQD-----GIVTAVNDLNFSLKQGETLGIVGESGSGKSQTVFAIMGL 57
Query: 64 IEPTDGKII----FMGKDVTKLKGEELKWFR-RKAQIMFQDPYSSLDPRQTVFQIIMEPV 118
+ +GKI F GK++ L EL R + ++FQDP +SL+P V +ME +
Sbjct: 58 LAK-NGKITGSAKFEGKEILNLPERELNKVRAEQIAMIFQDPMTSLNPYMKVSDQLMEVL 116
Query: 119 KFH-GIQVDDPEEFVIRLLESVGLNEMH--LYRYPHEFSGGQRQRIALARLLALKPEFIV 175
H G+ + E +R+LE+V + E + YPHEFSGG RQR+ +A L +P+ ++
Sbjct: 117 MLHKGMGKAEAFEESVRMLEAVKIPEARKRITMYPHEFSGGMRQRVMIAMALLCRPKLLI 176
Query: 176 LDEPTSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVG 235
DEPT+ALDV+VQA I+ L EL+ + + I+HDLGVV D++ VMY G+ +E G
Sbjct: 177 ADEPTTALDVTVQAQIMELLNELKREFNTAIIMITHDLGVVAGSCDKVLVMYAGRTMEYG 236
Query: 236 PADRIFENPLHPYTQMLFSAIPIPDPDLAREMKKKRMKVTGEPPSPINPPKGCRFHPRCP 295
+ IF NP HPY + L SAIP D + + + G PP+ + P GC + RC
Sbjct: 237 SVNDIFYNPSHPYAEGLLSAIPRLDTE-----GEVLPTIPGNPPNLLRLPVGCPYQERC- 290
Query: 296 YAKAGLCDKEEPPMVEVEKDHYVACW 321
+ C +E P ++ AC+
Sbjct: 291 HRVTDRCKREAPILLPFGNSRQRACF 316
>pir||T03431 probable transport protein accB - Agrobacterium tumefaciens plasmid
pTiC58 >gi|3153178|gb|AAC17198.1| (AF010180) AccB
[Agrobacterium tumefaciens]
Length = 321
Score = 194 bits (489), Expect = 9e-49
Identities = 114/302 (37%), Positives = 165/302 (53%), Gaps = 20/302 (6%)
Query: 27 VKAVDGVSFEIKRGETFGLVGESGCGKTTT----GRTILRLIEPTDGKIIFMGKDVTKLK 82
+ ++GVSF + G+T GLVGESGCGK+ T + + R I T G I +L
Sbjct: 28 ITIINGVSFSLDAGQTLGLVGESGCGKSMTCYAIAKALPRGISQTGGTI--------ELD 79
Query: 83 GEELKWFRRKAQIMFQDPYSSLDPRQTVFQIIMEPVKFH-GIQVDDPEEFVIRLLESVGL 141
+ +++QDP SSL+P ++ + + H G++ +D +RLLE VG+
Sbjct: 80 SGPKADGKPAIAMIYQDPTSSLNPVHSIGYYLESSLYRHQGLEGNDARLEAMRLLERVGI 139
Query: 142 N--EMHLYRYPHEFSGGQRQRIALARLLALKPEFIVLDEPTSALDVSVQANILNTLKELQ 199
+ + L YPHE+SGG QR+ +A LA KP+ ++ DEPT+ALDV+ QA IL+ L+EL+
Sbjct: 140 DRAKSRLRSYPHEYSGGMNQRVMIAHALAAKPKLMIADEPTTALDVTTQAQILHLLEELR 199
Query: 200 EKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVGPADRIFENPLHPYTQMLFSAIPIP 259
+ G L +SHDLGV+ ++DR VMY GK+VE P + E HPY + L +P
Sbjct: 200 SETGMALLIVSHDLGVIARLADRAAVMYCGKIVETAPVAELLERAAHPYARALIGCMPTI 259
Query: 260 DPDLAREMKKKRMKVTGEPPSPINPPKGCRFHPRCPYAKAGLCDKEEPPMVEVEKDHYVA 319
D D + + + G P N P GC +HPRCP A + C P V V H A
Sbjct: 260 DAD----DLEPPVPIPGSVPLLDNLPAGCYYHPRCPRA-SEQCSVSFPGPVNVGAFHDAA 314
Query: 320 CW 321
C+
Sbjct: 315 CY 316
>pir||G72049 peptide ABC transporter, ATP-binding protein CP0064 [imported] -
Chlamydophila pneumoniae (strains CWL029 and AR39)
>gi|4376984|gb|AAD18822.1| (AE001650) ABC ATPase
Dipeptide Transport [Chlamydophila pneumoniae CWL029]
>gi|7189001|gb|AAF37953.1| (AE002170) peptide ABC
transporter, ATP-binding protein [Chlamydophila
pneumoniae AR39] >gi|8979055|dbj|BAA98890.1| (AP002547)
ABC ATPase dipeptide transport [Chlamydophila pneumoniae
J138]
Length = 324
Score = 194 bits (489), Expect = 9e-49
Identities = 116/310 (37%), Positives = 173/310 (55%), Gaps = 9/310 (2%)
Query: 3 ETVLKVENLKKYFPIRGLF---RTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRT 59
+ +++ +L K++ R + +TI + VD VSF + GL+GESG GK+T
Sbjct: 7 QPLIQATSLTKHYYKRSFWFQGKTIA-SRPVDDVSFSLYSRRAVGLIGESGSGKSTLALA 65
Query: 60 ILRLIEPTDGKIIFMGKDVTKLKGEELKWFRRKAQIMFQDPYSSLDPRQTVFQIIMEPVK 119
+ L+ T G + F G + R + +++FQ+P +SL+PR+T+ + +
Sbjct: 66 LAGLLPLTSGFLTFNGTPIKLHSKHGRHQLRSQVRLVFQNPQASLNPRKTILDSLGHSLL 125
Query: 120 FHGIQVDDPEEFVIR-LLESVGLNEMHLYRYPHEFSGGQRQRIALARLLALKPEFIVLDE 178
+H + + +R LE VGL+E + YRYPH+ SGGQ+QR+++AR L P+ I+ DE
Sbjct: 126 YHKLVPKEKVLATVREYLELVGLSEEYFYRYPHQLSGGQQQRVSIARALLGVPQLIICDE 185
Query: 179 PTSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVGPAD 238
SALD+S+QA ILN L ELQ+K TYLFISHDL VV+ + +MY G++VE G
Sbjct: 186 IVSALDLSIQAQILNMLAELQKKLSLTYLFISHDLAVVRSFCTEVFIMYKGQIVEKGNTK 245
Query: 239 RIFENPLHPYTQMLFSAIPIPDPDLAREMKKKRMKVTGEPPSPINPPKGCRFHPRCPYAK 298
RIF +P HPYT+ML +A PD + + K + S + GC F+ RCP K
Sbjct: 246 RIFSDPQHPYTRMLLNAQLPETPD---QRQSKPIFQEYHKDSEESCSTGCYFYNRCP-QK 301
Query: 299 AGLCDKEEPP 308
C E P
Sbjct: 302 QEACKSEIIP 311
>emb|CAA61525.1| (X89237) oligopeptidepermease [Streptococcus pyogenes]
Length = 356
Score = 193 bits (485), Expect = 3e-48
Identities = 114/304 (37%), Positives = 172/304 (56%), Gaps = 17/304 (5%)
Query: 29 AVDGVSFEIKRGETFGLVGESGCGKTTTGRTILRLIEPT----DGKIIFMGKDVTKLKGE 84
A+ VS E+ GE VGESG GK+ +T ++E +G I++ G+++T LK
Sbjct: 27 AIRNVSLELVEGEVLAFVGESGSGKSVLTKTFTGMLESNGRIANGSIVYRGQELTDLKTN 86
Query: 85 ELKWFR---RKAQIMFQDPYSSLDPRQTVFQIIMEPV-KFHGIQVDDPEEFVIRLLESVG 140
+ +W + K +FQDP +SL P +T+ I E + K + +E + + VG
Sbjct: 87 K-EWAKIRGSKIATIFQDPMTSLSPIKTIGSQITEVIIKHQKVSHAKAKEMALDYMNKVG 145
Query: 141 LN--EMHLYRYPHEFSGGQRQRIALARLLALKPEFIVLDEPTSALDVSVQANILNTLKEL 198
+ + YP E+SGG RQRI +A LA +P+ ++ DEPT+ALDV++QA I+ LK L
Sbjct: 146 IPNAKKRFEDYPFEYSGGMRQRIVIAIALACRPDILICDEPTTALDVTIQAQIVELLKSL 205
Query: 199 QEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVGPADRIFENPLHPYTQMLFSAIPI 258
Q ++ FT +FI+HDLGVV ++D++ VMY G++VE G + IF +P HPYT L S++
Sbjct: 206 QREYHFTIIFITHDLGVVASIADKVAVMYAGEIVEFGTVEEIFYDPRHPYTWSLLSSL-- 263
Query: 259 PDPDLAREMKKKRMKVTGEPPSPINPPKGCRFHPRCPYAKAGLCDKEEPPMVEVEKDHYV 318
P LA E + + G PPS +P G F R YA L ++ PP + V + H+
Sbjct: 264 --PQLADE-SGELYAIPGTPPSLYSPIIGDAFALRSEYAMV-LDFEKAPPAINVSETHWA 319
Query: 319 ACWL 322
WL
Sbjct: 320 KTWL 323
>pir||D72720 probable oligopeptide transport ATP-binding protein oppD APE0301 -
Aeropyrum pernix (strain K1) >gi|5103940|dbj|BAA79256.1|
(AP000059) 282aa long hypothetical oligopeptide
transport ATP-binding protein oppD [Aeropyrum pernix]
Length = 282
Score = 192 bits (482), Expect = 6e-48
Identities = 116/287 (40%), Positives = 163/287 (56%), Gaps = 18/287 (6%)
Query: 46 VGESGCGKTTTGRTILRLIEPT----DGKIIF-MGK----DVTKLKGEELKWFRRK-AQI 95
+GESGCGK+T R+I R++ G II +G D+ +L +EL R K +
Sbjct: 1 MGESGCGKSTLARSIARILPSNAVIEKGSIILNLGSGNTVDLVRLSEDELVKIRGKIVSM 60
Query: 96 MFQDPYSSLDPRQTVFQIIMEPVKFHGIQVDDPEEFVIRLLESVGLNEMHLYRYPHEFSG 155
+FQDP ++L P V + + + V +V+ + +++ L + M L +YPHE SG
Sbjct: 61 IFQDPSAALSPVHKVKKQVTDHVSGEKRRVEKIAQEILKKL-MMPAPHMILEKYPHELSG 119
Query: 156 GQRQRIALARLLALKPEFIVLDEPTSALDVSVQANILNTLKELQEKHGFTYLFISHDLGV 215
G +QRI +A L +P I+ DEPT+ALDV+VQA IL L L+E+ T + I+H+L V
Sbjct: 120 GMKQRIVIAASLITRPRIIIADEPTTALDVTVQAQILKMLSRLREELETTIILITHNLAV 179
Query: 216 VKYMSDRIGVMYLGKLVEVGPADRIFENPLHPYTQMLFSAIPIPDPDLAREMKKKRMKVT 275
++DRI VMY G +VEV +FE PLHPYT+ L +IP P D E +
Sbjct: 180 AAEIADRIAVMYAGHVVEVADVFSLFERPLHPYTKGLLKSIPKPHVDEEIE------PIR 233
Query: 276 GEPPSPINPPKGCRFHPRCPYAKAGLCDKEEPPMVEVEKDHYVACWL 322
GEPPS +PP GCRFHPRCPY +C + +P + E VAC L
Sbjct: 234 GEPPSLADPPPGCRFHPRCPYV-MDVCMRIKPRLEERAPGRLVACHL 279
>gi|10954941 Probable accB [Agrobacterium tumefaciens]
>gi|6498294|dbj|BAA87746.1| (AB016260) Probable accB
[Agrobacterium tumefaciens]
Length = 321
Score = 191 bits (481), Expect = 8e-48
Identities = 113/302 (37%), Positives = 164/302 (53%), Gaps = 20/302 (6%)
Query: 27 VKAVDGVSFEIKRGETFGLVGESGCGKTTT----GRTILRLIEPTDGKIIFMGKDVTKLK 82
+ ++GVSF + G+T GLVGESGCGK+ T + + R I T G I +L
Sbjct: 28 ITIINGVSFSLDAGQTLGLVGESGCGKSMTCYAIAKALPRGISQTGGTI--------ELN 79
Query: 83 GEELKWFRRKAQIMFQDPYSSLDPRQTVFQIIMEPVKFH-GIQVDDPEEFVIRLLESVGL 141
+ +++QDP SSL+P ++ + + H G++ +D +RLLE VG+
Sbjct: 80 SGPKADGKPAIAMIYQDPTSSLNPVHSIGYYLESSLYRHQGLEGNDARLEAMRLLERVGI 139
Query: 142 N--EMHLYRYPHEFSGGQRQRIALARLLALKPEFIVLDEPTSALDVSVQANILNTLKELQ 199
+ + L YPHEFSGG QR+ +A KP+ ++ DEPT+ALDV+ QA IL+ L+EL+
Sbjct: 140 DRAKSRLRSYPHEFSGGMNQRVMIATRSLAKPKLMIADEPTTALDVTTQAQILHLLEELR 199
Query: 200 EKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVGPADRIFENPLHPYTQMLFSAIPIP 259
+ G L +SHDLGV+ ++DR VMY GK+VE P + E+ HPY + L +P
Sbjct: 200 SETGMALLIVSHDLGVIARLADRAAVMYCGKIVETAPVAELLEHAAHPYARALIGCMPTI 259
Query: 260 DPDLAREMKKKRMKVTGEPPSPINPPKGCRFHPRCPYAKAGLCDKEEPPMVEVEKDHYVA 319
D D + + + G P N P GC +HPRCP A + C P V V H A
Sbjct: 260 DAD----DLEPPVPIPGSVPLLDNLPAGCYYHPRCPRA-SEQCSVSFPGPVNVGAFHDAA 314
Query: 320 CW 321
C+
Sbjct: 315 CY 316
>pir||C81746 peptide ABC transporter, ATP-binding protein TC0062 [imported] -
Chlamydia muridarum (strain Nigg)
>gi|7190098|gb|AAF38947.1| (AE002273) peptide ABC
transporter, ATP-binding protein [Chlamydia muridarum]
Length = 321
Score = 191 bits (481), Expect = 8e-48
Identities = 117/331 (35%), Positives = 179/331 (53%), Gaps = 24/331 (7%)
Query: 3 ETVLKVENLKKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTILR 62
+ +L+V+NL L R V+ +SF + G+T ++GESG GK+ T +++++
Sbjct: 4 QPLLQVKNLSV-----SLNRNTVSFPVVEDLSFNVFPGQTLAIIGESGSGKSITAQSLMQ 58
Query: 63 LIEPTDGKI---IFMGK----DVTKLKGEELKWFRRKAQIMFQDPYSSLDPRQTVFQIIM 115
L+ I F+ K D L + L F K ++FQ+P +S DP T+ Q
Sbjct: 59 LLPEEYFSISGEAFLHKENLLDRKNLLSKTL--FGSKMAMIFQNPLASFDPVFTIEQQFH 116
Query: 116 EPVKFH-GIQVDDPEEFVIRLLESVGLN--EMHLYRYPHEFSGGQRQRIALARLLALKPE 172
E ++ H + E ++ +L G E + YPHE SGG QR+A+A L P+
Sbjct: 117 EVIRTHLDLTKKVAHEQIVTVLRETGFQDPERCIKLYPHELSGGMLQRMAIAMTLLTSPD 176
Query: 173 FIVLDEPTSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLV 232
++ DEPT+ALDVSVQ IL LK LQ+K G + L I+HD+GVV M+D + V+Y G++
Sbjct: 177 LLIADEPTTALDVSVQYQILQLLKTLQKKTGMSLLVITHDMGVVAEMADDVFVLYAGRMA 236
Query: 233 EVGPADRIFENPLHPYTQMLFSAIPIPDPDLAREMKKKRMKVTGEPPSPINPPKGCRFHP 292
E IF +P HPYT+ L ++ P ++ K+ + ++G PP N PKGC + P
Sbjct: 237 EYSSVQDIFHSPAHPYTKDLLASRP------SQYKKQTFVPISGHPPHYTNLPKGCCYSP 290
Query: 293 RCPYAKAGLCDKEEPPMVEVEKDHYVACWLY 323
RC A +C K+ P + + H+V CWLY
Sbjct: 291 RCQKA-LPICYKQSPHAISLNDHHHVRCWLY 320
>emb|CAA68076.1| (X99740) oligopeptide transport ATP-binding protein homolog
[Mycoplasma hominis]
Length = 388
Score = 191 bits (480), Expect = 1e-47
Identities = 119/329 (36%), Positives = 185/329 (56%), Gaps = 23/329 (6%)
Query: 5 VLKVENLKKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTILRLI 64
+LKV NL FP +G ++I V+ VD ++ RGE GLVGESG GK+ T +T++ +
Sbjct: 44 ILKVRNLHVSFP-QGHKKSIHIVRGVD---LDVHRGEIIGLVGESGSGKSVTSKTLINVN 99
Query: 65 EP---TDGKIIFMGKDVTKLKGEELKWFRRKAQIMF--QDPYSSLDPRQTVFQIIMEPVK 119
E + +I ++T +K ++ + R +I + QDP +SL+P +TV + +++ +
Sbjct: 100 ESGIISADQIQIGEYELTNIKKQKYWQYIRGQKIGYIPQDPLTSLNPTRTVGKQLLDALN 159
Query: 120 ----FHGIQVDDPEEFVIRLLESVGLN--EMHLYRYPHEFSGGQRQRIALARLLALKPEF 173
+ + + ++I LL++ GL E Y YPH SGG +QRI + ++ALKPE
Sbjct: 160 NNEDWKNSTYTEKKNYLIGLLKTFGLRSAEKIFYAYPHTLSGGMKQRIVITMVVALKPEL 219
Query: 174 IVLDEPTSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVE 233
I+ DEPT+ALD +VQA++L +++++K G + + ISH++ V+ D I VMY G++VE
Sbjct: 220 IIADEPTTALDPTVQASVLALFEDIRQKMGISIILISHNISVIAKFCDYIYVMYAGRIVE 279
Query: 234 VGPADRIFENPLHPYTQMLFSAIPIPDPDLAREMKKKRMKVTGEPPSPINPPKGCRFHPR 293
G IF NP HPYT L SAIP +K + G PP N P G F R
Sbjct: 280 KGTKQEIFTNPAHPYTWALISAIP-------ESKDEKLYTIQGTPPDMANLPLGDPFVYR 332
Query: 294 CPYAKAGLCDKEEPPMVEVEKDHYVACWL 322
YA + +EPP++ + + H A WL
Sbjct: 333 NDYA-LEIDYLKEPPLIPITETHAAATWL 360
>pir||E71957 ABC transporter, ATP-binding protein - Helicobacter pylori (strain
J99) >gi|4154751|gb|AAD05811.1| (AE001461) ABC
transporter, ATP-binding protein [Helicobacter pylori
J99]
Length = 516
Score = 189 bits (475), Expect = 4e-47
Identities = 104/257 (40%), Positives = 155/257 (59%), Gaps = 3/257 (1%)
Query: 1 MTETVLKVENLKKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTI 60
+ ET+L+V++ Y+ + FR + V F +K E G++GESG GK++ +
Sbjct: 259 LDETLLEVKDFSVYYLQKRFFRPSLKKPLIASVDFSLKAKENIGIIGESGSGKSSLALGL 318
Query: 61 LRLIEPTDGKIIFMGKDVTKLKGEELKWFRRKAQIMFQDPYSSLDPRQTVFQIIMEPVKF 120
L+L G+ +G+ V L + K +R+ Q++FQDPY+SL+PR ++ I++E ++F
Sbjct: 319 LKLAL-NSGEEKILGQSVGLLNSKAFKPYRKILQMVFQDPYASLNPRLSIQSILIEALRF 377
Query: 121 HGIQVDDPE--EFVIRLLESVGLNEMHLYRYPHEFSGGQRQRIALARLLALKPEFIVLDE 178
+ E LE V LN L Y +E SGG+RQR+A+AR +ALKP I+LDE
Sbjct: 378 AYPKASQQEWHHLAELCLEEVCLNPELLNFYAYELSGGERQRVAIARAIALKPRIILLDE 437
Query: 179 PTSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVGPAD 238
PTSALD S+Q ++L L LQEK +YLFISHDL V+K DR+ V+ GK+VE G +
Sbjct: 438 PTSALDKSIQKSVLELLLNLQEKQDLSYLFISHDLDVIKAFCDRVLVVSEGKIVETGAIE 497
Query: 239 RIFENPLHPYTQMLFSA 255
+F+NP H YT+ L +
Sbjct: 498 EVFDNPKHAYTKRLLES 514
Score = 141 bits (351), Expect = 1e-32
Identities = 80/241 (33%), Positives = 133/241 (54%), Gaps = 6/241 (2%)
Query: 29 AVDGVSFEIKRGETFGLVGESGCGKTTTGRTILRL---IEPTDGKIIFMGKDVTKLKGEE 85
++ ++ + E +VGESG GK++ ++RL +P +G+I+F ++ K
Sbjct: 16 SLQNINISLSYSERVAIVGESGSGKSSIANLVMRLNPRFKPHNGEILFETTNLLKESEAF 75
Query: 86 LKWFRRKA-QIMFQDPYSSLDPRQTVFQIIMEPVKFHGIQVDDP--EEFVIRLLESVGLN 142
++ R + QDP SSL+P + + + E H +E V+ ++ V L+
Sbjct: 76 MQHLRGNIIAYIAQDPLSSLNPLHKIGKQMSEAYFLHHKNASQVLLKEQVLNAMKQVQLD 135
Query: 143 EMHLYRYPHEFSGGQRQRIALARLLALKPEFIVLDEPTSALDVSVQANILNTLKELQEKH 202
E L RYP+E SGGQRQR+ +A + P+ ++ DEPT+ALD +Q IL+ LK+L +
Sbjct: 136 EKFLDRYPYELSGGQRQRVCIAMGIINAPKLLICDEPTTALDAQIQNQILDLLKQLSVEK 195
Query: 203 GFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVGPADRIFENPLHPYTQMLFSAIPIPDPD 262
LFISHDL VK ++DR+ V+ G++VE +F +P H Y+++L A +P +
Sbjct: 196 NIALLFISHDLKAVKRLADRVYVLKKGEIVETNLTKELFNDPKHEYSKLLIQASNLPAKN 255
Query: 263 L 263
L
Sbjct: 256 L 256
>pir||B64551 oligopeptide ABC transporter, ATP-binding protein - Helicobacter
pylori (strain 26695) >gi|2313342|gb|AAD07317.1|
(AE000544) oligopeptide ABC transporter, ATP-binding
protein (oppD) [Helicobacter pylori 26695]
Length = 516
Score = 185 bits (464), Expect = 8e-46
Identities = 101/257 (39%), Positives = 156/257 (60%), Gaps = 3/257 (1%)
Query: 1 MTETVLKVENLKKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTI 60
+ ET+L+V++ Y+ + FR + V+F +K E G++GESG GK++ +
Sbjct: 259 LDETLLEVKDFSVYYLQKRFFRPSLKKPLIASVNFSLKAKENIGIIGESGSGKSSLALGL 318
Query: 61 LRLIEPTDGKIIFMGKDVTKLKGEELKWFRRKAQIMFQDPYSSLDPRQTVFQIIMEPVKF 120
L+L G+ +G+ V L + K +R+ Q++FQDPY+SL+PR ++ I+ E ++F
Sbjct: 319 LKLAL-NSGEEKILGQSVGSLNSKAFKPYRKILQMVFQDPYASLNPRLSIQSILTEALRF 377
Query: 121 HGIQVDDPE--EFVIRLLESVGLNEMHLYRYPHEFSGGQRQRIALARLLALKPEFIVLDE 178
+ E LE V L+ L Y +E SGG+RQR+A+AR +ALKP+ I+LDE
Sbjct: 378 AYPKASKEEWHHLAKLCLEEVCLSHELLNSYAYELSGGERQRVAIARAIALKPKIILLDE 437
Query: 179 PTSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVGPAD 238
PTSALD S+Q ++L L +LQEK +YLFISHDL V+K D++ V+ GK+VE+
Sbjct: 438 PTSALDKSIQKSVLELLLDLQEKQDLSYLFISHDLDVIKAFCDKVLVISEGKVVEMNTIK 497
Query: 239 RIFENPLHPYTQMLFSA 255
+F+NP H YT+ L +
Sbjct: 498 EVFDNPKHAYTKRLLES 514
Score = 141 bits (353), Expect = 8e-33
Identities = 81/241 (33%), Positives = 134/241 (54%), Gaps = 6/241 (2%)
Query: 29 AVDGVSFEIKRGETFGLVGESGCGKTTTGRTILRL---IEPTDGKIIFMGKDVTKLKGEE 85
++ ++ + E +VGESG GK++ I+RL +P +G+++F ++ K E
Sbjct: 16 SLQNINISLNPSERVAIVGESGSGKSSIANIIMRLNPRFKPHNGEVLFETTNLLKESEEF 75
Query: 86 LKWFRRKA-QIMFQDPYSSLDPRQTVFQIIMEPVKFHGIQVDDP--EEFVIRLLESVGLN 142
++ R A + QDP SSL+P + + + E H +E V+ ++ V L+
Sbjct: 76 MQHLRGNAIAYIAQDPLSSLNPLHKIGKQMSEAYFLHYKNASKTLLKEQVLNAMKQVQLD 135
Query: 143 EMHLYRYPHEFSGGQRQRIALARLLALKPEFIVLDEPTSALDVSVQANILNTLKELQEKH 202
E L RYP+E SGGQRQR+ +A + P+ ++ DEPT+ALD +Q IL+ K+L +
Sbjct: 136 EKFLDRYPYELSGGQRQRVCIAMGIINAPKLLICDEPTTALDAQIQNQILDLPKQLSAEK 195
Query: 203 GFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVGPADRIFENPLHPYTQMLFSAIPIPDPD 262
LFISHDL VK ++DR+ V+ G++VE +F +P H Y+++L A +P +
Sbjct: 196 NIALLFISHDLKAVKRLADRVYVLKKGEIVETNLTKDLFNDPKHEYSKLLIQASNLPAKN 255
Query: 263 L 263
L
Sbjct: 256 L 256
>gb|AAK41518.1| Oligo/dipeptide transport, ATP binding protein . amino-end
fragment. (dppF-2) [Sulfolobus solfataricus]
Length = 245
Score = 183 bits (461), Expect = 2e-45
Identities = 106/233 (45%), Positives = 149/233 (63%), Gaps = 12/233 (5%)
Query: 3 ETVLKVENLKKYFPIR--GLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTI 60
E ++KV+N+ +P+ GLFR + +V AV+ VS EIK+GE FGL+GESG GKTT G+ I
Sbjct: 5 EIIVKVQNVWIKYPMGRVGLFRKL-YVHAVNDVSLEIKKGEIFGLIGESGSGKTTLGKGI 63
Query: 61 LRLIEPTDGKIIFM---GK--DVTKLKGEELKWFRRKAQIMFQDPYSSLDPRQTVFQIIM 115
LRLIE G I + GK D+TKL L+ R+ QI+ QDPY +LDPR +V++I+
Sbjct: 64 LRLIETYSGSIYWKVDGGKLVDITKLNDNTLRRLRKDFQIIQQDPYGALDPRMSVYEILA 123
Query: 116 EPVKFHGIQVDDPEEF--VIRLLESVGLN--EMHLYRYPHEFSGGQRQRIALARLLALKP 171
E ++ H + + EE + ++L V L E + P E SGGQRQR+ +AR L L+P
Sbjct: 124 EGLRLHKLISNKSEEVEQIYKILSIVKLTPPENFANKKPMELSGGQRQRVVVARALLLRP 183
Query: 172 EFIVLDEPTSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIG 224
+FIV DEP S LD S + IL + +++ G YLFI+HD+ + Y+SDRIG
Sbjct: 184 KFIVADEPISMLDASTRGQILEFILNDRDQRGTAYLFITHDISIASYVSDRIG 236
>sp|P47325|OPPD_MYCGE OLIGOPEPTIDE TRANSPORT ATP-BINDING PROTEIN OPPD
>gi|1361734|pir||G64208 oligopeptide transport
ATP-binding protein amiE - Mycoplasma genitalium
>gi|1045756|gb|AAC71297.1| (U39688) oligopeptide ABC
transporter, ATP-binding protein (oppD) [Mycoplasma
genitalium]
Length = 402
Score = 183 bits (460), Expect = 2e-45
Identities = 122/366 (33%), Positives = 188/366 (51%), Gaps = 62/366 (16%)
Query: 5 VLKVENLKKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTILRLI 64
+L + +L F ++ G + AV G+ +++RG G+VGESG GK+ + ++I+
Sbjct: 21 ILDITDLHVNFKVKD-----GILHAVRGIDLKVERGSIVGIVGESGSGKSVSVKSIIGFN 75
Query: 65 E--PTDGKII-FMGKDVTKLKGEELKWFRRK-AQIMFQDPYSSLDPRQTVFQIIMEPV-- 118
+ T K++ F D+TKLK + K++R + QDP SL+P T+ + + E +
Sbjct: 76 DNAQTKAKLMNFKNVDITKLKKHQWKYYRGTYVSYISQDPLFSLNPTMTIGKQVKEAIYV 135
Query: 119 -------------KF------------------------HGIQVDDPEEFVIRLLESVGL 141
KF I+ + E+ + +L+ +G+
Sbjct: 136 ASKRRYFQAKSDLKFALSNKEIDKKTYKSKLKEIKQTYQQKIKPINVEKKTLEILQFIGI 195
Query: 142 NEM--HLYRYPHEFSGGQRQRIALARLLALKPEFIVLDEPTSALDVSVQANILNTLKELQ 199
N+ L +P EFSGG RQRI +A +A +P+ I+ DEPT+ALDV++QA +L +K+L+
Sbjct: 196 NDAKKRLKAFPSEFSGGMRQRIVIAIAVATEPDLIIADEPTTALDVTIQAKVLTLIKQLR 255
Query: 200 EKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVGPADRIFENPLHPYTQMLFSAIPIP 259
+ T +FISH++ ++ D + VMY GK+VE G + IF NPLHPYT L S+IP
Sbjct: 256 DLLNITIIFISHNISLIANFCDFVYVMYAGKIVEQGLVEEIFTNPLHPYTWALISSIP-- 313
Query: 260 DPDLAREMKKKRMKVTGEP---PSPINPPKGCRFHPRCPYAKAGLCDKEEPPMVEVEKDH 316
E K K +T P P+ + PPKG F R YA A + + PP EV K H
Sbjct: 314 ------EQKDKNKPLTSIPGVIPNMLTPPKGDAFASRNQYALA-IDFEYHPPFFEVTKTH 366
Query: 317 YVACWL 322
A WL
Sbjct: 367 KAATWL 372
>dbj|BAA15988.1| (D90849) Oligopeptide transport ATP-binding protein OppD.
[Escherichia coli]
Length = 370
Score = 182 bits (457), Expect = 5e-45
Identities = 107/270 (39%), Positives = 160/270 (58%), Gaps = 14/270 (5%)
Query: 1 MTETVLKVENLKKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTI 60
MT+T+L +ENL F + RT+ V+ VS +I+ GET LVGESG GK+ T +I
Sbjct: 1 MTQTLLAIENLSVGFRHQQTVRTV-----VNDVSLQIEAGETLALVGESGSGKSVTALSI 55
Query: 61 LRL-----IEPTDGKIIFMGKDVTKLKGEELKWFR-RKAQIMFQDPYSSLDPRQTVFQII 114
LRL +E G I F G+ + + L+ R K ++FQ+P SL+P T+ + +
Sbjct: 56 LRLLPSPPVEYLSGDIRFHGESLLHASDQTLRGVRGNKIAMIFQEPMVSLNPLHTLEKQL 115
Query: 115 MEPVKFH-GIQVDDPEEFVIRLLESVGLNEM--HLYRYPHEFSGGQRQRIALARLLALKP 171
E + H G++ + ++ L+ VG+ + L YPH+ SGG+RQR+ +A L +P
Sbjct: 116 YEVLSLHRGMRREAARGEILNCLDRVGIRQAAKRLTDYPHQLSGGERQRVMIAMALLTRP 175
Query: 172 EFIVLDEPTSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKL 231
E ++ DEPT+ALDVSVQA IL L+ELQ + LFI+H+L +V+ ++ R+ VM G+
Sbjct: 176 ELLIADEPTTALDVSVQAQILQLLRELQGELNMGMLFITHNLSIVRKLAHRVAVMQNGRC 235
Query: 232 VEVGPADRIFENPLHPYTQMLFSAIPIPDP 261
VE A +F +P HPYTQ L ++ P DP
Sbjct: 236 VEQNYAATLFASPTHPYTQKLLNSEPSGDP 265
Score = 76.5 bits (185), Expect = 4e-13
Identities = 45/98 (45%), Positives = 60/98 (60%), Gaps = 3/98 (3%)
Query: 4 TVLKVENLKKYFPIRG--LFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTIL 61
T+L VE L+ FPIR L R + V +SF ++ GET GLVGESG GK+TTG +L
Sbjct: 274 TLLDVEQLQVAFPIRKGILKRIVDHNVVVKNISFTLRAGETLGLVGESGSGKSTTGLALL 333
Query: 62 RLIEPTDGKIIFMGKDVTKLKGEELKWFRRKAQIMFQD 99
RLI + G IIF G+ + L +L R + Q++FQD
Sbjct: 334 RLIN-SQGSIIFDGQPLQNLNRRQLLPIRHRIQVVFQD 370
>pir||E83082 probable ATP-binding component of ABC transporter PA4505 [imported]
- Pseudomonas aeruginosa (strain PAO1)
>gi|9950745|gb|AAG07893.1|AE004864_5 (AE004864) probable
ATP-binding component of ABC transporter [Pseudomonas
aeruginosa]
Length = 324
Score = 181 bits (454), Expect = 1e-44
Identities = 109/303 (35%), Positives = 162/303 (52%), Gaps = 15/303 (4%)
Query: 27 VKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTILRLIEP----TDGKIIFMGKDVTKLK 82
V VDG+ + +GE +VGESG GK+ T ++ LI+ + + F G D+ LK
Sbjct: 19 VPVVDGLDLSVDKGEVLAIVGESGSGKSVTMMALMGLIDAPGWVSADHLRFDGHDMLTLK 78
Query: 83 GEELKWFRRKAQIM-FQDPYSSLDPRQTVFQIIMEPVKFH-GIQVDDPEEFVIRLLESVG 140
G + + K M FQDP ++L+P TV I E ++ H G++ + + LLE V
Sbjct: 79 GRQRRRIVGKDMAMVFQDPMTALNPSYTVGYQIEEVLRLHLGLRGKALRQRALELLERVE 138
Query: 141 LNEM--HLYRYPHEFSGGQRQRIALARLLALKPEFIVLDEPTSALDVSVQANILNTLKEL 198
+ L YPH+ SGG QR+A+A +A +P+ ++ DEPT+ALDV++QA I+ L L
Sbjct: 139 IPAAASRLDAYPHQLSGGMSQRVAIAMAIAAEPKLLIADEPTTALDVTIQAQIMELLLNL 198
Query: 199 QEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVGPADRIFENPLHPYTQMLFSAIPI 258
Q + I+HDL VV + R+ VMY G+ VE+G +F+ P HPYT+ L AIP
Sbjct: 199 QRDQDMALILITHDLAVVAETAQRVCVMYAGEAVEIGGVPALFDRPTHPYTEALIKAIPE 258
Query: 259 PDPDLAREMKKKRMKVTGEPPSPINPPKGCRFHPRCPYAKAGLCDKEEPPMVEVEKDHYV 318
AR + G P + P+GC PRCPYA+ ++E P +E + V
Sbjct: 259 HCAGEAR-----LATLPGIVPGRYDRPRGCLLSPRCPYAQEHC--RQERPALETHERGAV 311
Query: 319 ACW 321
C+
Sbjct: 312 RCF 314
>sp|P77268|YDDP_ECOLI HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PROTEIN YDDP
>gi|7445758|pir||G64901 ABC-type transport protein b1484
- Escherichia coli >gi|1742424|dbj|BAA15139.1| (D90789)
Dipeptide transport ATP-binding protein DppD.
[Escherichia coli] >gi|1742435|dbj|BAA15149.1| (D90790)
Dipeptide transport ATP-binding protein DppD.
[Escherichia coli] >gi|1787759|gb|AAC74557.1| (AE000245)
putative ATP-binding component of a transport system
[Escherichia coli K12]
Length = 328
Score = 179 bits (449), Expect = 5e-44
Identities = 114/331 (34%), Positives = 174/331 (52%), Gaps = 22/331 (6%)
Query: 1 MTETVLKVENLKKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTI 60
MT+ VL ++ L FP G V A++ VS +I RGE GLVGESG GK+ T I
Sbjct: 1 MTQPVLDIQQLHLSFPGFN-----GDVHALNNVSLQINRGEIVGLVGESGSGKSVTAMLI 55
Query: 61 LRLIEPTD------GKIIFMGKDVTKLKGEELK-WFRRKAQIMFQDPYSSLDPRQTVFQI 113
+RL+ PT G+I +G+DV + ++L+ W + ++FQ+P ++L+P + +
Sbjct: 56 MRLL-PTGSYCVHRGQISLLGEDVLNAREKQLRQWRGARVAMIFQEPMTALNPTRRIGLQ 114
Query: 114 IMEPVKFHG-IQVDDPEEFVIRLLESVGLNEMH--LYRYPHEFSGGQRQRIALARLLALK 170
+M+ ++ H I + I LLE + + + + RYP E SGG RQR+ +A + +
Sbjct: 115 MMDVIRHHQPISRREARAKAIDLLEEMQIPDAVEVMSRYPFELSGGMRQRVMIALAFSCE 174
Query: 171 PEFIVLDEPTSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGK 230
P+ I+ DEPT+ALDV+VQ +L LK G LFISHD+ VV + D + VMY G
Sbjct: 175 PQLIIADEPTTALDVTVQLQVLRLLKHKARASGTAVLFISHDMAVVSQLCDSVYVMYAGS 234
Query: 231 LVEVGPADRIFENPLHPYTQMLFSAIPIPDPDLAREMKKKRMKVTGEPPSPINPPKGCRF 290
++E G + +P HPYT L P+ + R++ + G P+ + P GC F
Sbjct: 235 VIESGVTADVIHHPRHPYTIGLLQC--APEHGVPRQLLP---AIPGTVPNLTHLPDGCAF 289
Query: 291 HPRCPYAKAGLCDKEEPPMVEVEKDHYVACW 321
RC YA C+ + + ACW
Sbjct: 290 RDRC-YAAGAQCENVPALTACGDNNQRCACW 319
>pir||E70141 oligopeptide transport ATP-binding protein oppD - Lyme disease
spirochete >gi|2281462|gb|AAC46287.1| (AF000366)
oligopeptide permease homolog D [Borrelia burgdorferi]
>gi|2688243|gb|AAC66722.1| (AE001140) oligopeptide ABC
transporter, ATP-binding protein (oppD) [Borrelia
burgdorferi]
Length = 290
Score = 178 bits (448), Expect = 6e-44
Identities = 105/285 (36%), Positives = 164/285 (56%), Gaps = 17/285 (5%)
Query: 3 ETVLKVENLKKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTILR 62
E +L+++NL F ++ + V V+ +KRGE +VGESG GK+ T IL+
Sbjct: 4 ENILEIKNLTIEFRLKHTT-----IHPVSNVNLSVKRGEIRAIVGESGSGKSVTSMAILK 58
Query: 63 LIEPT-----DGKIIFMGKDVTKLKGEELKWFR-RKAQIMFQDPYSSLDPRQTVFQIIME 116
L+ G+I+F +D+ KL +EL R K ++FQDP +SL+P + + E
Sbjct: 59 LLPELTTVYKSGEILFENQDLLKLSEKELLKIRGNKISMIFQDPMTSLNPFLRISTQLEE 118
Query: 117 PVKFH-GIQVDDPEEFVIRLLESVGL--NEMHLYRYPHEFSGGQRQRIALARLLALKPEF 173
+ H G+ + +E I +L++VG+ E + +PH+FSGG RQR+ +A L+ P
Sbjct: 119 TIILHQGLGKKEAKEKAIEMLKTVGVVNAEERIKHFPHQFSGGMRQRVMIAMALSCHPSL 178
Query: 174 IVLDEPTSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVE 233
++ DEPT+ALDV++Q IL +K L +K + +FI+HDL VV + D + VMY GK+VE
Sbjct: 179 LIADEPTTALDVTIQEQILLLIKNLSKKFNTSTIFITHDLAVVAEICDTVSVMYQGKIVE 238
Query: 234 VGPADRIFENPLHPYTQMLFSAIPIPDPDLAREM---KKKRMKVT 275
G + IF NP HPYT L +I + D +++ K+ MK+T
Sbjct: 239 EGTVEEIFNNPKHPYTIGLLKSILTLEHDPNKKLYSTKENPMKIT 283
>sp|P36637|SAPF_ECOLI PEPTIDE TRANSPORT SYSTEM ATP-BINDING PROTEIN SAPF
>gi|7445934|pir||E64877 peptide transport system
ATP-binding protein sapF - Escherichia coli
>gi|470683|gb|AAA17671.1| (U08190) Shows similarity with
ATP-binding proteins from other ABC-transport operons,
Swiss Prot Accession Numbers P24137, P08007, P04285,
P24136 [Escherichia coli] >gi|1279404|emb|CAA65941.1|
(X97282) SapF protein [Escherichia coli]
>gi|1742103|dbj|BAA14843.1| (D90766) Peptide transport
system ATP-binding protein SapF. [Escherichia coli]
>gi|1742112|dbj|BAA14851.1| (D90767) Peptide transport
system ATP-binding protein SapF. [Escherichia coli]
>gi|1787547|gb|AAC74372.1| (AE000227) putative
ATP-binding protein of peptide transport system
[Escherichia coli K12]
Length = 268
Score = 176 bits (442), Expect = 3e-43
Identities = 92/256 (35%), Positives = 164/256 (63%), Gaps = 6/256 (2%)
Query: 1 MTETVLKVENLKKYFPIR-GLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRT 59
M ET+L+V NL K F R G FR V+AV +SF ++ G+T ++GE+G GK+T +
Sbjct: 1 MIETLLEVRNLSKTFRYRTGWFRR-QTVEAVKPLSFTLREGQTLAIIGENGSGKSTLAKM 59
Query: 60 ILRLIEPTDGKIIFMGKDVTKLKGEELKWFRRKAQIMFQDPYSSLDPRQTVFQIIMEPVK 119
+ +IEPT G+++ D L + + ++ +++FQDP +SL+PRQ + QI+ P++
Sbjct: 60 LAGMIEPTSGELLI---DDHPLHFGDYSFRSQRIRMIFQDPSTSLNPRQRISQILDFPLR 116
Query: 120 FH-GIQVDDPEEFVIRLLESVGLNEMHLYRYPHEFSGGQRQRIALARLLALKPEFIVLDE 178
+ ++ + + +I + VGL H+ YPH + GQ+QR+ LAR L L+P+ I+ DE
Sbjct: 117 LNTDLEPEQRRKQIIETMRMVGLLPDHVSYYPHMLAPGQKQRLGLARALILRPKVIIADE 176
Query: 179 PTSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVGPAD 238
++LD+S+++ ++N + ELQEK G +Y++++ +G++K++SD++ VM+ G++VE G
Sbjct: 177 ALASLDMSMRSQLINLMLELQEKQGISYIYVTQHIGMMKHISDQVLVMHQGEVVERGSTA 236
Query: 239 RIFENPLHPYTQMLFS 254
+ +PLH T+ L +
Sbjct: 237 DVLASPLHELTKRLIA 252
>pir||JC5009 nucleotide-binding protein D - Methanosarcina mazei
>gi|1491738|emb|CAA62801.1| (X91502) ABC transporter
[Methanosarcina mazei]
Length = 317
Score = 175 bits (439), Expect = 7e-43
Identities = 113/331 (34%), Positives = 174/331 (52%), Gaps = 31/331 (9%)
Query: 3 ETVLKVENLKKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTILR 62
+ +L+V+NL+ F I V A+ G+SF I ET LVGE+GCGK+ I+R
Sbjct: 7 DKLLEVKNLQVSF------LGIKTVTALSGISFSIGERETLALVGETGCGKSVAAHAIMR 60
Query: 63 LIEPTDG---KIIFMGKDVTKLKGEELKWFRRKA-QIMFQDPYSSLDPRQTVFQIIMEPV 118
L+ P G + G+++ L +E+ R K I+FQ+P +L+P ++ + EP+
Sbjct: 61 LLPPESGVKGTVELRGRNLLGLSEKEMTEIRGKEIGIIFQNPSLALNPVYSIGHQLAEPL 120
Query: 119 KFHGIQVDDPEEFVIRLLESV------GLNEMHLYRYPHEFSGGQRQRIALARLLALKPE 172
+ H + + ++ + R E++ E+ Y YP SGG QR +A L P
Sbjct: 121 RLH--RKEKKKKALSRAAEALKNMGFANTGEIINY-YPSWCSGGMNQRFLIAASTILDPA 177
Query: 173 FIVLDEPTSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLV 232
++ DEP LD S + + LK L+E+ L ISHDLG V+ ++DR+ VMY G++V
Sbjct: 178 LLIADEPGKGLDRSCLSELEAGLKRLKEEKKTALLLISHDLGFVRNLADRVAVMYAGEIV 237
Query: 233 EVGPADRIFENPLHPYTQMLFSAIPIPDPDLAREMKKKRMKVTGEPPSPINPPKGCRFHP 292
E+ + IFE PLHPYT+ L +++P +K + + G P P GCRFHP
Sbjct: 238 EIADSSGIFEEPLHPYTKGLLNSLP----------EKGFIPIPGFSPPLSRLPSGCRFHP 287
Query: 293 RCPYAKAGLCDKEEPPMVEVEKDHYVACWLY 323
RCP K C + +P ++E V C+LY
Sbjct: 288 RCPLRKR-CCIENQPEIIET-NGRAVRCFLY 316
>gb|AAK41519.1| Oligo/dipeptide transport, ATP binding protein . (dppD-2)
[Sulfolobus solfataricus]
Length = 323
Score = 175 bits (438), Expect = 9e-43
Identities = 104/308 (33%), Positives = 177/308 (56%), Gaps = 19/308 (6%)
Query: 25 GWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTILRLIEPT---DGKIIFMGKDVTKL 81
G ++A++ V F++++G++ G++GE+G GKTT I+R + G I F KD+ K+
Sbjct: 17 GSIRAINRVYFQLEKGDSLGVIGETGSGKTTIANAIMRALPENAEYSGSIFFNNKDILKM 76
Query: 82 KGE----ELKWFRRKAQIMFQDPYSSLDPRQTVFQIIMEPVKFHGIQVDDPE--EFVIRL 135
E E++W +K I+ Q ++ +P + V + +++ + + +D + E + L
Sbjct: 77 DQETYRKEIRW--KKISIIPQYSMNAFNPIKRVGEQLVKIMMENDSNIDTSKASERIFYL 134
Query: 136 LESVGLNEMHLYRYPHEFSGGQRQRIALARLLALKPEFIVLDEPTSALDVSVQANILNTL 195
+ L + P E SGGQRQR+ +A L L PE ++ DEPT+ALDV QA +++ +
Sbjct: 135 FNQLSLPPEIYKKLPDELSGGQRQRVVIASALLLDPELVIADEPTTALDVINQARVISLI 194
Query: 196 K-ELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVGPADRIFENPLHPYTQMLFS 254
K E+ +K T ++I+HD+ VV ++ ++ +Y G+++E G + +IF+ PLHPY++ L S
Sbjct: 195 KREIVDKQK-TLIYITHDIAVVAGVAKKVLTLYAGEIMEFGDSRKIFKEPLHPYSKGLLS 253
Query: 255 AIPIPDPDLAREMKKKRMKVTGEPPSPINPPKGCRFHPRCPYAKAGLCDKEEPPMVEVEK 314
++ PD+ KK + G+PP KGC F PRC AK +C E+P + V+
Sbjct: 254 SV----PDIRFGKVKKVHYIPGDPPDLSKEIKGCPFAPRCSIAK-DICKVEKPKLRYVD- 307
Query: 315 DHYVACWL 322
YVAC L
Sbjct: 308 GRYVACHL 315
>emb|CAC12446.1| (AL445067) probable oligopeptide ABC transport system, ATP-binding
protein appD [Thermoplasma acidophilum]
Length = 298
Score = 174 bits (436), Expect = 2e-42
Identities = 95/299 (31%), Positives = 164/299 (54%), Gaps = 17/299 (5%)
Query: 33 VSFEIKRGETFGLVGESGCGKTTTGRTILRLI----EPTDGKIIFMGKDVTKLKGEELKW 88
++ +++G G+ GESG GK+T + I R + E T G++ +D+ ++ GE+L+
Sbjct: 1 MNLRVRKGIILGIAGESGSGKSTLAQAIYRSLKYPGEITSGQVYLDDQDILRINGEDLRR 60
Query: 89 FRR-KAQIMFQDPYSSLDPRQTVFQIIMEPVKFHGIQVDDPEEFVIRLLESVGLNEMHLY 147
R + + Q ++L+P + + + + HG+Q + E+ + ++ V L E L
Sbjct: 61 IRATRFSFIPQAAMNALNPVKRIRYQFYDLLIAHGLQPEKNEDRIQAAIKMVRLRENVLE 120
Query: 148 RYPHEFSGGQRQRIALARLLALKPEFIVLDEPTSALDVSVQANILNTLKELQEKHGFTYL 207
+PHE SGG RQR+ +A L L+P+ ++LDEPT+ LDV VQ IL LK +Q + G T +
Sbjct: 121 SFPHELSGGMRQRVVIAMSLLLRPDLVILDEPTTGLDVLVQHEILKDLKAIQRQSGLTMI 180
Query: 208 FISHDLGVVKYMSDRIGVMYLGKLVEVGPADRIFENPLHPYTQMLFSAIPIPDPDLAREM 267
FI+HDL ++ ++D I ++Y G++VE GP D + +P HPY +L ++P +
Sbjct: 181 FITHDLSILYEIADEIAMIYAGEIVEFGPRDEMLNDPQHPYNFLLLRSMP--------RI 232
Query: 268 KKKR---MKVTGEPPSPINPPKGCRFHPRCPYAKAGLCDKEEPPMVEVEKDHYVACWLY 323
KR ++ G P + GC+F+ RCP++ C + P + + H+ C Y
Sbjct: 233 GAKRGTGYRLIGNPGNFREDFNGCQFYTRCPFS-VPQCVSKHPELTSDDGRHFRRCLRY 290
>gb|AAK43146.1| ABC transporter, ATP binding protein [Sulfolobus solfataricus]
Length = 331
Score = 172 bits (432), Expect = 4e-42
Identities = 111/330 (33%), Positives = 168/330 (50%), Gaps = 18/330 (5%)
Query: 1 MTETVLKVENLKKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTI 60
M+E + V+NL G G +K + VS +I + G+ GESG GK+T TI
Sbjct: 1 MSEISISVKNLNV-----GYLSDYGIIKVLRNVSIDIPESKIIGVAGESGSGKSTLATTI 55
Query: 61 LRLIEPT----DGKIIFMGK-DVTKLKGEELKWFRRKA-QIMFQDPYSSLDPRQTVFQII 114
+ + P G II K D+ + +EL R + Q +SL+P + V +
Sbjct: 56 MGFVNPPLYVERGSIIVDSKYDILSMSRDELNKIRGSVISYVPQAAQNSLNPIRKVKETF 115
Query: 115 MEPVKFHGIQVDDPEEFVIRLLESVGLNEMH-LYRYPHEFSGGQRQRIALARLLALKPEF 173
+ +K G+ + V LE VGL + L YP + SGG +QR+ +A L L P+
Sbjct: 116 TDILKAKGMDYYANIDVVYNTLEEVGLTDRQVLDMYPFQLSGGMKQRVVIAISLLLNPKI 175
Query: 174 IVLDEPTSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVE 233
+++DEPT+ LDV VQ IL LK++Q++ T + ISHD+ ++ +SD I VMY G++VE
Sbjct: 176 LIMDEPTTGLDVVVQYEILKLLKKIQKEKDLTLVVISHDIAMLFQISDYIAVMYGGQIVE 235
Query: 234 VGPADRIFENPLHPYTQMLFSAIPIPDPDLAREMKKKRMKVTGEPPSPINPPKGCRFHPR 293
G + + E HPYT +L S++P R KK ++ G+ I PKGC F R
Sbjct: 236 YGKYNTLLEEAYHPYTYLLLSSVP-----TVRSRGKKLPRIPGDFEGFIRYPKGCVFSSR 290
Query: 294 CPYAKAGLCDKEEPPMVEVEKDHYVACWLY 323
CP+ C + P +V +K + C Y
Sbjct: 291 CPFV-TSTCKEVPPQIVAYDKFGFYKCIRY 319
>sp|P36638|SAPF_SALTY PEPTIDE TRANSPORT SYSTEM ATP-BINDING PROTEIN SAPF
>gi|628821|pir||S39589 peptide transport system
ATP-binding protein sapF - Salmonella typhimurium
>gi|414212|emb|CAA52288.1| (X74212) sapF [Salmonella
typhimurium]
Length = 268
Score = 172 bits (432), Expect = 4e-42
Identities = 90/256 (35%), Positives = 162/256 (63%), Gaps = 6/256 (2%)
Query: 1 MTETVLKVENLKKYFPIR-GLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRT 59
M ET+L+V NL K F R G FR V AV +SF ++ +T ++GE+G GK+T +
Sbjct: 1 MVETLLEVRNLSKTFRYRTGWFRR-QTVDAVKPLSFTLRERQTLAIIGENGSGKSTLAKM 59
Query: 60 ILRLIEPTDGKIIFMGKDVTKLKGEELKWFRRKAQIMFQDPYSSLDPRQTVFQIIMEPVK 119
+ +IEPT G+++ D L + + ++ +++FQDP +SL+PRQ + QI+ P++
Sbjct: 60 LAGMIEPTSGELLI---DDHPLHYGDYSFRSQRIRMIFQDPSTSLNPRQRISQILDFPLR 116
Query: 120 FH-GIQVDDPEEFVIRLLESVGLNEMHLYRYPHEFSGGQRQRIALARLLALKPEFIVLDE 178
+ ++ + + ++ + VGL H+ YPH + GQ+QR+ LAR L L+P+ I+ DE
Sbjct: 117 LNTDLEPEQRRKQIVETMRMVGLLPDHVSYYPHMLAPGQKQRLGLARALILRPKVIIADE 176
Query: 179 PTSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVGPAD 238
++LD+S+++ ++N + ELQEK G +Y++++ +G++K++SD++ VM+ G++VE G
Sbjct: 177 ALASLDMSMRSQLINLMLELQEKQGISYIYVTQHIGMMKHISDQVLVMHQGEVVERGSTA 236
Query: 239 RIFENPLHPYTQMLFS 254
+ +PLH T+ L +
Sbjct: 237 DVLASPLHELTRRLIA 252
>gb|AAG20460.1| (AE005118) oligopeptide ABC transporter ATP-binding; OppD1
[Halobacterium sp. NRC-1]
Length = 267
Score = 172 bits (431), Expect = 6e-42
Identities = 97/256 (37%), Positives = 144/256 (55%), Gaps = 19/256 (7%)
Query: 77 DVTKLKGEELKWFR-RKAQIMFQDPYSSLDPRQTVFQIIMEPVKFHGIQVDDPE----EF 131
D+T L L+ R ++ +FQ+P + L+P TV + I E ++ H DPE
Sbjct: 2 DLTTLSETALQDVRGKRISHIFQNPQNGLNPVYTVGRQIGEAIRIH--DHGDPEVPVQRQ 59
Query: 132 VIRLLESVGLNEM--HLYRYPHEFSGGQRQRIALARLLALKPEFIVLDEPTSALDVSVQA 189
V+ LL+ G+ E + YPHEFSGG +QR+ +A LA P+ ++ DEPT+ALDV++Q
Sbjct: 60 VVDLLDKTGIPEASARVDDYPHEFSGGMKQRVLIAMALACDPDLLIADEPTTALDVTIQG 119
Query: 190 NILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVGPADRIFENPLHPYT 249
IL L++LQ +H +F++HDLGVV ++DR+ VMY GK++E G + IF NP HPYT
Sbjct: 120 QILRLLEDLQAEHDMGIIFVTHDLGVVSEIADRVVVMYAGKVMETGTVEDIFRNPSHPYT 179
Query: 250 QMLFSAIPIPDPDLAREMKKKRMKVTGEPPSPINPPKGCRFHPRCPYAKAGLCDKEEPPM 309
+ L +P + R + G P +PP GCRF PRC +A ++PP+
Sbjct: 180 RALMDCLPGRGGSMDR--------IEGSLPDVTDPPAGCRFSPRCEHATEACRSGDQPPL 231
Query: 310 --VEVEKDHYVACWLY 323
V+ H +C Y
Sbjct: 232 WGVDDGDTHEASCVYY 247
>sp|Q07733|OPPD_LACLA OLIGOPEPTIDE TRANSPORT ATP-BINDING PROTEIN OPPD
>gi|1075749|pir||A53290 oligopeptide transport protein
oppD - Lactococcus lactis subsp. lactis
>gi|308850|gb|AAA16163.1| (L18760) ATP binding protein
[Lactococcus lactis]
Length = 338
Score = 171 bits (429), Expect = 1e-41
Identities = 108/327 (33%), Positives = 173/327 (52%), Gaps = 21/327 (6%)
Query: 2 TETVLKVENLKKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTIL 61
+E +L+ + + F I G F+ KA+ + +KRGE +VGESG GK+T ++
Sbjct: 3 SENILEAKQVSVAFRIAGKFQ-----KAIYDIDLSLKRGEVLAIVGESGSGKSTFATAVM 57
Query: 62 RLIEPTD----GKIIFMGKDVTKLKGEELKWFR-RKAQIMFQDPYSSLDPRQTVFQIIME 116
L P G I+ ++V G+ + R K ++FQ+P ++L+P + Q I E
Sbjct: 58 GLHNPNQTQITGSILLDDEEVIGKTGDSMASIRGSKVGMIFQNPLTALNPLMKIGQQIKE 117
Query: 117 PVKFHGIQVDDP-EEFVIRLLESVGLNEMH--LYRYPHEFSGGQRQRIALARLLALKPEF 173
+ H + ++ E + +LLE VG+ + ++PH+ SGG RQR+ +A +A P+
Sbjct: 118 MLAVHDVYPENQYESRIFQLLEQVGIPNPKRVVNQFPHQLSGGMRQRVMIAIAIANDPDL 177
Query: 174 IVLDEPTSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVE 233
I+ DEPT+ALDV++QA IL+ + E+Q+K + I+HDLGVV ++D + VMY G+LVE
Sbjct: 178 IIADEPTTALDVTIQAQILDLILEIQKKKNAGVILITHDLGVVAEVADTVAVMYAGQLVE 237
Query: 234 VGPADRIFENPLHPYTQMLFSAIPIPDPDLAREMKKKRMKVTGEPP--SPINPPKGCRFH 291
+ +F+NP HPYT+ L + P A + + G P S I K F
Sbjct: 238 KTSVEELFQNPKHPYTRSLLRSNP-----SAETVSDDLYVIPGSVPSLSKIEYDKDL-FL 291
Query: 292 PRCPYAKAGLCDKEEPPMVEVEKDHYV 318
R P+ K M E+ +H+V
Sbjct: 292 ARVPWMKEEAQKVISEKMTEISSNHFV 318
>dbj|BAA94702.1| (AB026907) dipeptide transporter DppD homolog [Ochrobactrum
anthropi]
Length = 334
Score = 171 bits (429), Expect = 1e-41
Identities = 112/328 (34%), Positives = 166/328 (50%), Gaps = 20/328 (6%)
Query: 2 TETVLKVENLKKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTIL 61
T +L V+NL F G V A +GVS +I GET G+VGESG GK+ R +L
Sbjct: 3 TSPLLSVDNLNVTFSTPR-----GNVVANNGVSLQIAGGETLGIVGESGSGKSVLCRALL 57
Query: 62 RLIEPTDG-----KIIFMGKDVTKLKGEELKWFR-RKAQIMFQDPYSSLDPRQTVFQIIM 115
L+ +++F G+++ L E++ R ++ ++FQ+P SSL+P + I
Sbjct: 58 GLLPSPPATIRADRLVFAGRNMLSLTAAEMRAVRGQEISMVFQNPMSSLNPVWPIGDQIS 117
Query: 116 EPVKFH-GIQVDDPEEFVIRLLESVGLN--EMHLYRYPHEFSGGQRQRIALARLLALKPE 172
E ++ H GI I L VG+ E+ + YPH++SGG QR +A + +P+
Sbjct: 118 EGLRVHRGIGNAQARSAAIAALRRVGIPSPEIRVDDYPHQWSGGMAQRAVIAMAMIGEPK 177
Query: 173 FIVLDEPTSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLV 232
++ DEPT+ALDV++Q IL+ L +LQ + G + +SHD+ V+ D + VMY G +V
Sbjct: 178 LLLADEPTTALDVTIQDQILSLLMQLQRETGMAIVLVSHDMSVISETCDNVAVMYAGGVV 237
Query: 233 EVGPADRIFENPLHPYTQMLFSAIPIPDPDLAREMKKKRMKVTGEPPSPINPPKGCRFHP 292
E G IF P HPYT L ++IP P R K + G+PP GC F
Sbjct: 238 ETGRTTDIFRTPSHPYTAGLLNSIP---PIKGR--ADKLASIPGQPPDLARLGPGCPFFE 292
Query: 293 RCPYAKAGLCDKEEPPMVEVEKDHYVAC 320
RC A A C + + AC
Sbjct: 293 RCSVASAE-CQTRPVALKRLASGQQTAC 319
>sp|P50980|OPPD_LACLC OLIGOPEPTIDE TRANSPORT ATP-BINDING PROTEIN OPPD
>gi|495177|gb|AAB00533.1| (U09553) ATP binding protein
[Lactococcus lactis]
Length = 338
Score = 171 bits (428), Expect = 1e-41
Identities = 107/327 (32%), Positives = 173/327 (52%), Gaps = 21/327 (6%)
Query: 2 TETVLKVENLKKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTIL 61
+E +L+ + + F I G F+ KA+ + ++RGE +VGESG GK+T ++
Sbjct: 3 SENILEAKQVSVAFRIAGKFQ-----KAIYDIDLSLRRGEVLAIVGESGSGKSTLATAVM 57
Query: 62 RLIEPTD----GKIIFMGKDVTKLKGEELKWFR-RKAQIMFQDPYSSLDPRQTVFQIIME 116
L P G I+ ++V G+ + R K ++FQ+P ++L+P + Q I E
Sbjct: 58 GLHNPNQTQITGSILLDEEEVIGKTGDSMASIRGSKVGMIFQNPLTALNPLMKIGQQIKE 117
Query: 117 PVKFHGIQVDDP-EEFVIRLLESVGLNEMH--LYRYPHEFSGGQRQRIALARLLALKPEF 173
+ H + ++ E + +LLE VG+ + ++PH+ SGG RQR+ +A +A P+
Sbjct: 118 MLAVHDVYPENQYESRIFQLLEQVGIPNPKRVVNQFPHQLSGGMRQRVMIAIAIANDPDL 177
Query: 174 IVLDEPTSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVE 233
I+ DEPT+ALDV++QA IL+ + E+Q+K + I+HDLGVV ++D + VMY G+LVE
Sbjct: 178 IIADEPTTALDVTIQAQILDLILEIQKKKNAGVILITHDLGVVAEVADTVAVMYAGQLVE 237
Query: 234 VGPADRIFENPLHPYTQMLFSAIPIPDPDLAREMKKKRMKVTGEPP--SPINPPKGCRFH 291
+ +F+NP HPYT+ L + P A + + G P S I K F
Sbjct: 238 KASVEELFQNPKHPYTRSLLRSNP-----SAETVSDDLYVIPGSVPSLSEIEYDKDL-FL 291
Query: 292 PRCPYAKAGLCDKEEPPMVEVEKDHYV 318
R P+ K M E+ +H+V
Sbjct: 292 ARVPWMKEEAQKVISEKMTEISSNHFV 318
>sp|P75552|OPPD_MYCPN OLIGOPEPTIDE TRANSPORT ATP-BINDING PROTEIN OPPD
>gi|2146480|pir||S73940 oligopeptide transport
ATP-binding protein oppD - Mycoplasma pneumoniae (strain
ATCC 29342) >gi|1674316|gb|AAB96262.1| (AE000058)
oligopeptide transport ATP-binding protein OppD
[Mycoplasma pneumoniae]
Length = 423
Score = 170 bits (426), Expect = 2e-41
Identities = 114/368 (30%), Positives = 189/368 (50%), Gaps = 62/368 (16%)
Query: 3 ETVLKVENLKKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTILR 62
+ +L + +L F ++ G ++AV GV ++K+G G+VGESG GK+ ++I+
Sbjct: 19 DLILDIRDLHVSFKVKD-----GIMQAVRGVDLKVKKGSIVGIVGESGSGKSVCVKSIIG 73
Query: 63 LIE--PTDGKII-FMGKDVTKLKGEELKWFRRK-AQIMFQDPYSSLDPRQTVFQIIMEPV 118
+ T K++ F D++K+K + +++R + QDP SL+P T+ + + E +
Sbjct: 74 FNDGAKTTAKLMNFKNIDISKMKKHQWQYYRGTYVSYISQDPLFSLNPTMTIGRQVKEAI 133
Query: 119 -------------------KFHGIQVDDPEEFV--------------------IRLLESV 139
+ I +D +E + + +L +
Sbjct: 134 YVSCKRRYYQTKSDLKYDLQTERIDLDTYKEKLAQAKETYKAKTTKAAVHAKTLEILNFI 193
Query: 140 GLN--EMHLYRYPHEFSGGQRQRIALARLLALKPEFIVLDEPTSALDVSVQANILNTLKE 197
G++ E L +P EFSGG RQRI +A +A +P+ I+ DEPT+ALDV++QA LN +K+
Sbjct: 194 GIDQAEKRLKAFPSEFSGGMRQRIVIAIAVATEPDLIIADEPTTALDVTIQAKALNLIKQ 253
Query: 198 LQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVGPADRIFENPLHPYTQMLFSAIP 257
L++ T +FISH++ ++ D + VMY G+LVE G + IF NP+HPYT L ++IP
Sbjct: 254 LRDLLNITIIFISHNISLIANFCDFVYVMYAGRLVEKGLVEEIFTNPVHPYTWALMASIP 313
Query: 258 IPDPDLAREMKKKRMKVTGEP---PSPINPPKGCRFHPRCPYAKAGLCDKEEPPMVEVEK 314
E K +T P P+ ++PPKG F R +A A + + +PP +V +
Sbjct: 314 --------EGTDKNAPLTSIPGYIPNMLSPPKGDAFAARNQFALA-IDFEHQPPFFDVTE 364
Query: 315 DHYVACWL 322
H A WL
Sbjct: 365 THKAATWL 372
>emb|CAA10913.1| (AJ222649) sapF [Erwinia chrysanthemi]
Length = 269
Score = 170 bits (426), Expect = 2e-41
Identities = 97/257 (37%), Positives = 155/257 (59%), Gaps = 6/257 (2%)
Query: 1 MTETVLKVENLKKYFPIR-GLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRT 59
M ET+L+ NL K F R G FR V+AV VSF ++ +T ++GE+G GK+T +
Sbjct: 1 MVETLLEARNLTKTFRYRTGWFRR-QHVQAVKSVSFTLRERQTLAIIGENGSGKSTLAKM 59
Query: 60 ILRLIEPTDGKIIFMGKDVTKLKGEELKWFRRKAQIMFQDPYSSLDPRQTVFQIIMEPVK 119
+ +I PT G+++ D L+ + + ++ ++ QD +SL+PRQ + Q++ P++
Sbjct: 60 LSGVIPPTSGELVI---DDHPLQYGDYHYRSQRIRMSIQDSATSLNPRQRIGQLLELPLR 116
Query: 120 FHGIQVDDPEEFVIRL-LESVGLNEMHLYRYPHEFSGGQRQRIALARLLALKPEFIVLDE 178
+ E I L L VGL H YPH + GQ+QRI LAR L L+P+ IV DE
Sbjct: 117 LNTDLTPQEREKAINLALRQVGLRADHATYYPHALAPGQKQRIGLARALILQPKVIVADE 176
Query: 179 PTSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVGPAD 238
++LD+SV++ I+N + ELQEKHG +Y++++ LG++K++SD+I VM G++VE G
Sbjct: 177 VLASLDMSVRSQIINLMLELQEKHGISYIYVTQHLGMMKHISDQILVMQAGEVVERGSTA 236
Query: 239 RIFENPLHPYTQMLFSA 255
+ PLH T+ L ++
Sbjct: 237 DVLAAPLHDLTKRLIAS 253
>gb|AAK42789.1| ABC transporter, ATP binding protein [Sulfolobus solfataricus]
Length = 362
Score = 168 bits (420), Expect = 1e-40
Identities = 116/329 (35%), Positives = 177/329 (53%), Gaps = 26/329 (7%)
Query: 5 VLKVENLKKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTILRLI 64
+L+V NL + G R I KAV+ VSF +++GE G++GESG GKTT ILR I
Sbjct: 45 ILEVHNLNVIYD-EGNSRII---KAVNDVSFGVEKGEILGIIGESGSGKTTLISAILRAI 100
Query: 65 EPT----DGKIIFMGKDVTKLKGEEL-KWFRRKAQIMFQDPYSSLDPRQTVFQIIMEPVK 119
P GK+IF G D+ + +E K + + Q ++L+P + +I
Sbjct: 101 RPPGKIISGKVIFNGMDIFSMTIDEFRKLLWKDISYVPQASQNALNPVLPISEIFYHEAI 160
Query: 120 FHGIQVDDPE--EFVIRLLESVGLNEMHLYR-YPHEFSGGQRQRIALARLLALKPEFIVL 176
HG + D E LL+ VGL+ + + YP + SGG +QR+ +A L L P+ I++
Sbjct: 161 SHG-EADKKRVIERASELLKLVGLDPARVLKMYPFQLSGGMKQRVMIALSLLLNPKLILM 219
Query: 177 DEPTSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVGP 236
DEPTSALD+ Q +L +K + ++ G T ++++HD+ + +++R+ VMY G ++E G
Sbjct: 220 DEPTSALDMLNQELLLKLIKNINQEMGVTIVYVTHDILNIAQIANRLLVMYKGYVMEEGK 279
Query: 237 ADRIFENPLHPYTQMLFSAIPIPDPDLAREMKKKRMKVTGEPPSP--INPPKGCRFHPRC 294
+ I ++PL+PYT +L S+IP K +KV P ++ KGC F RC
Sbjct: 280 TEEIIKSPLNPYTSLLVSSIP---------SLKGEVKVINVPLDEPLVSKEKGCPFLARC 330
Query: 295 PYAKAGLCDKEEPPMVEVEKDHYVACWLY 323
A G C KEE P + + D V C LY
Sbjct: 331 SKA-FGRC-KEELPEIRLVYDRKVRCHLY 357
>emb|CAC16446.1| (AL450165) putative oligopeptide ABC transporter ATP-binding
protein [Streptomyces coelicolor]
Length = 288
Score = 168 bits (420), Expect = 1e-40
Identities = 103/264 (39%), Positives = 151/264 (57%), Gaps = 14/264 (5%)
Query: 3 ETVLKVENLKKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTILR 62
+ +L+++ L F + G V AV VS ++ GET +VGESG GK+ T ++LR
Sbjct: 25 QPLLEIDGLSVDFHLAGSV-----VHAVRDVSLHVRAGETLAVVGESGSGKSATALSVLR 79
Query: 63 LIEP-----TDGKIIFMGKDVTKLKGEELKWFR-RKAQIMFQDPYSSLDPRQTVFQIIME 116
L G+I F G+D+ +L +EL R R ++FQDP + LDP Q V + E
Sbjct: 80 LNPSPPCVYASGEIRFDGRDLLRLSEKELGRVRGRDIAMVFQDPMTCLDPLQRVGAQVAE 139
Query: 117 PVKFH-GIQVDDPEEFVIRLLESVGLNEMHL-YR-YPHEFSGGQRQRIALARLLALKPEF 173
++ H G+ + + + L+ VG+ + L YR YPHE SGG RQR+ +A L +P
Sbjct: 140 VLRHHTGMSRAEAAKAALAALDEVGIPDPALRYRQYPHELSGGLRQRVMIATALVARPRV 199
Query: 174 IVLDEPTSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVE 233
++ DEPT+ALDV+VQ IL+ L LQ KH + I+HDL VV +DR+ VM+ GK+VE
Sbjct: 200 LIADEPTTALDVTVQRQILDLLVTLQHKHDMGVVLITHDLAVVAETADRVVVMHRGKVVE 259
Query: 234 VGPADRIFENPLHPYTQMLFSAIP 257
G +F+ P YT+ L +A P
Sbjct: 260 TGDVLDVFDRPADDYTRRLLAATP 283
>gb|AAA50595.1| (U08186) ATP-dependent oligopeptide transport protein D [Thermotoga
maritima]
Length = 277
Score = 165 bits (414), Expect = 6e-40
Identities = 98/268 (36%), Positives = 154/268 (56%), Gaps = 17/268 (6%)
Query: 3 ETVLKVENLKKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTILR 62
ET++ +NLK Y+ + L+ + VKAVD VS +I E +G+ GESGCGK+T + +L
Sbjct: 2 ETLISGKNLKAYY-VLDLWGSKKVVKAVDNVSLDILPNEIYGIAGESGCGKSTLLKALLA 60
Query: 63 LIEPT----DGKIIF----MGKDVTKLKGEELKWFRRK-AQIMFQDPYSSLDP----RQT 109
L++P DG++++ +VT LK E ++ R + Q L+P R T
Sbjct: 61 LLDPPLRLMDGELLYNIEGRPTNVTLLKSETIRKLRWSFISYIPQGSMHVLNPVKRVRDT 120
Query: 110 VFQIIMEPVKFHGIQVDDPEEFVIRLLESVGLNEMHLYRYPHEFSGGQRQRIALARLLAL 169
+I+ VK Q + + ++ L+ +GL E L +PH+ SGG RQR+ +A L
Sbjct: 121 FIEILSSHVKK---QTKEFLDLAVQHLKDLGLPERVLNMFPHQLSGGMRQRVTIALATVL 177
Query: 170 KPEFIVLDEPTSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLG 229
KP I DEPT+ALDV Q ++ ++++Q T + ++HD+GV ++ R+ +MY G
Sbjct: 178 KPRVIFADEPTTALDVVAQRAVMQLIRKIQNDLKNTVVLVTHDMGVHAQITTRMAIMYAG 237
Query: 230 KLVEVGPADRIFENPLHPYTQMLFSAIP 257
K+VE GP IF+NPLHPYT+ L ++P
Sbjct: 238 KIVEEGPTLEIFKNPLHPYTRYLIQSLP 265
>pir||E71545 probable oligopeptide transport ATPase - Chlamydia trachomatis
(serotype D, strain UW3/Cx) >gi|3328607|gb|AAC67793.1|
(AE001293) Oligopeptide Transport ATPase [Chlamydia
trachomatis]
Length = 277
Score = 150 bits (375), Expect = 2e-35
Identities = 93/271 (34%), Positives = 145/271 (53%), Gaps = 18/271 (6%)
Query: 1 MTETVLKVENLKKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTI 60
M+E +LK++NL + V+ +S IKR ++ LVGE+G GKTT + +
Sbjct: 1 MSEDLLKIDNLVVSVKDSNQ-------RLVNHLSLTIKRCQSMALVGENGSGKTTVSKAV 53
Query: 61 LRLIEPT----DGKIIFMGKDVTKLKGEELKWFR-RKAQIMFQDPYSSLDPRQTVFQIIM 115
L + G+I++ D+T+L +L+ R +K +FQ+ +L P V I+
Sbjct: 54 LGFLPDNCYIQSGRILYSSTDITRLSRRQLQTIRGKKIATIFQNAMGTLTPSMRVGAQIV 113
Query: 116 EPVKFHGIQVDDPEEF--VIRLLESVGLN--EMHLYRYPHEFSGGQRQRIALARLLALKP 171
E ++ H + E F LLESV + + L YP E SGG QR+++A LA P
Sbjct: 114 ETLRHH-FDMSKEEAFSKARELLESVHIESPDRCLQLYPFELSGGMCQRVSIAIALATNP 172
Query: 172 EFIVLDEPTSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKL 231
E I+ DEP++ALD QA +L L ++ + H L I+H+L +V + + + ++ G++
Sbjct: 173 ELIIADEPSTALDSISQAQVLRVLTQIHQNHSTALLLITHNLALVSELCEEMAIIRYGEI 232
Query: 232 VEVGPADRIFENPLHPYTQMLFSAIP-IPDP 261
VE GP + +P HPYTQ L AIP IP P
Sbjct: 233 VEQGPVQELLHSPSHPYTQQLIRAIPKIPSP 263
>gb|AAF73561.1| (AE002315) peptide ABC transporter, ATP-binding protein [Chlamydia
muridarum]
Length = 281
Score = 149 bits (373), Expect = 4e-35
Identities = 91/265 (34%), Positives = 144/265 (54%), Gaps = 15/265 (5%)
Query: 1 MTETVLKVENLKKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTI 60
M++T+LK+ENL + V+ +S IK+ ++ LVGE+G GKTT + I
Sbjct: 1 MSKTLLKIENLVVAIKESNQ-------RLVNHLSLTIKQRQSLALVGENGSGKTTVSKAI 53
Query: 61 LRLIEPT----DGKIIFMGKDVTKLKGEELKWFR-RKAQIMFQDPYSSLDPRQTVFQIIM 115
L + GKI + G D+T+L +E + R +K +FQ+ +L P V I+
Sbjct: 54 LGFLPDNCCIQSGKIFYSGTDITRLSRKEFQSIRGKKISTIFQNAMGTLTPSMRVGTQII 113
Query: 116 EPVKFHGIQVDDPEEFVIR-LLESVGLN--EMHLYRYPHEFSGGQRQRIALARLLALKPE 172
E ++ H + + R LL SV + + L YP E SGG QR+++A LA PE
Sbjct: 114 ETLRHHFVMSKEEAFAKARELLVSVHIESPDRCLQLYPFELSGGMCQRVSIAIALATNPE 173
Query: 173 FIVLDEPTSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLV 232
I+ DEP++ALD QA +L LK++ + + L I+H+L +V + + + +++ G++V
Sbjct: 174 LIIADEPSTALDSISQAQVLRVLKQIHQNNNTALLLITHNLALVSELCEEMAIIHHGEIV 233
Query: 233 EVGPADRIFENPLHPYTQMLFSAIP 257
E GP + +P HPYTQ L AIP
Sbjct: 234 EQGPVHELLRSPSHPYTQKLIRAIP 258
>sp|P16678|PHNK_ECOLI PHOSPHONATES TRANSPORT ATP-BINDING PROTEIN PHNK
>gi|96281|pir||C35719 phnK protein - Escherichia coli
>gi|147206|gb|AAA24349.1| (J05260) HisP-like nucleotide
binding protein (phnK) [Escherichia coli]
>gi|216600|dbj|BAA14271.1| (D90227) ATP-binding protein
[Escherichia coli]
Length = 252
Score = 136 bits (340), Expect = 3e-31
Identities = 86/259 (33%), Positives = 138/259 (53%), Gaps = 13/259 (5%)
Query: 1 MTETVLKVENLKK-YFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRT 59
M + +L V NL Y P +G VSF++ GE G+VGESG GKTT ++
Sbjct: 1 MNQPLLSVNNLTHLYAPGKGF----------SDVSFDLWPGEVLGIVGESGSGKTTLLKS 50
Query: 60 ILRLIEPTDGKIIFMGKDVTKL-KGEELKWFRRKAQIMFQDPYSSLDPRQTVFQIIMEPV 118
I + P G+I + + + + + + + R + ++ Q P L + + I E +
Sbjct: 51 ISARLTPQQGEIHYENRSLYAMSEADRRRLLRTEWGVVHQHPLDGLRRQVSAGGNIGERL 110
Query: 119 KFHGIQ-VDDPEEFVIRLLESVGLNEMHLYRYPHEFSGGQRQRIALARLLALKPEFIVLD 177
G + D + LE V + + P FSGG +QR+ +AR L P+ + +D
Sbjct: 111 MATGARHYGDIRATAQKWLEEVEIPANRIDDLPTTFSGGMQQRLQIARNLVTHPKLVFMD 170
Query: 178 EPTSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVGPA 237
EPT LDVSVQA +L+ L+ L + + ++HDLGV + ++DR+ VM G++VE G
Sbjct: 171 EPTGGLDVSVQARLLDLLRGLVVELNLAVVIVTHDLGVARLLADRLLVMKQGQVVESGLT 230
Query: 238 DRIFENPLHPYTQMLFSAI 256
DR+ ++P HPYTQ+L S++
Sbjct: 231 DRVLDDPHHPYTQLLVSSV 249
>pir||S56325 hisP protein-like nucleotide-binding protein phnK - Escherichia
coli >gi|536941|gb|AAA96996.1| (U14003) HisP-like
nucleotide binding protein (ATP-binding protein)
[Escherichia coli] >gi|1790535|gb|AAC77058.1| (AE000482)
ATP-binding component of phosphonate transport
[Escherichia coli K12]
Length = 252
Score = 136 bits (340), Expect = 3e-31
Identities = 86/259 (33%), Positives = 138/259 (53%), Gaps = 13/259 (5%)
Query: 1 MTETVLKVENLKK-YFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRT 59
M + +L V NL Y P +G VSF++ GE G+VGESG GKTT ++
Sbjct: 1 MNQPLLSVNNLTHLYAPGKGF----------SDVSFDLWPGEVLGIVGESGSGKTTQLKS 50
Query: 60 ILRLIEPTDGKIIFMGKDVTKL-KGEELKWFRRKAQIMFQDPYSSLDPRQTVFQIIMEPV 118
I + P G+I + + + + + + + R + ++ Q P L + + I E +
Sbjct: 51 ISARLTPQQGEIHYENRSLYAMSEADRRRLLRTEWGVVHQHPLDGLRRQVSAGGNIGERL 110
Query: 119 KFHGIQ-VDDPEEFVIRLLESVGLNEMHLYRYPHEFSGGQRQRIALARLLALKPEFIVLD 177
G + D + LE V + + P FSGG +QR+ +AR L P+ + +D
Sbjct: 111 MATGARHYGDIRATAQKWLEEVEIPANRIDDLPTTFSGGMQQRLQIARNLVTHPKLVFMD 170
Query: 178 EPTSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVGPA 237
EPT LDVSVQA +L+ L+ L + + ++HDLGV + ++DR+ VM G++VE G
Sbjct: 171 EPTGGLDVSVQARLLDLLRGLVVELNLAVVIVTHDLGVARLLADRLLVMKQGQVVESGLT 230
Query: 238 DRIFENPLHPYTQMLFSAI 256
DR+ ++P HPYTQ+L S++
Sbjct: 231 DRVLDDPHHPYTQLLVSSV 249
>pir||G83607 polyamine transport protein PotG PA0302 [imported] - Pseudomonas
aeruginosa (strain PAO1)
>gi|9946147|gb|AAG03691.1|AE004468_3 (AE004468)
polyamine transport protein PotG [Pseudomonas
aeruginosa]
Length = 384
Score = 136 bits (338), Expect = 5e-31
Identities = 86/242 (35%), Positives = 136/242 (55%), Gaps = 17/242 (7%)
Query: 3 ETVLKVENLKKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTILR 62
E ++K++ + K F T+ AVD VS I +GE F L+G SG GK+T R +
Sbjct: 20 EVLVKIDRVTKQFD-----ETL----AVDTVSLTINKGEIFALLGGSGSGKSTLLRMLAG 70
Query: 63 LIEPTDGKIIFMGKDVTKLKGEELKWFRRKAQIMFQDPYSSLDPRQTVFQIIMEPVKFHG 122
PT+G+I G+D+T +L + R +MFQ +L P +V Q I +K G
Sbjct: 71 FERPTEGRIFLDGQDIT-----DLPPYERPINMMFQS--YALFPHMSVAQNIAFGLKQDG 123
Query: 123 IQVDDPEEFVIRLLESVGLNEMHLYRYPHEFSGGQRQRIALARLLALKPEFIVLDEPTSA 182
+ + +E V +L+ V + + + R PH+ SGGQRQR+ALAR LA +P+ ++LDEP A
Sbjct: 124 LPKAEIDERVAEMLKLVHMTQ-YAKRKPHQLSGGQRQRVALARSLAKRPKLLLLDEPMGA 182
Query: 183 LDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVGPADRIFE 242
LD +++ + L E+ E+ G T + ++HD M+ RI +M+LG + ++G I+E
Sbjct: 183 LDKKLRSQMQLELVEIIERVGVTCVMVTHDQEEAMTMAQRIAIMHLGCIEQIGSPMDIYE 242
Query: 243 NP 244
P
Sbjct: 243 TP 244
>sp|P07109|HISP_ECOLI HISTIDINE TRANSPORT ATP-BINDING PROTEIN HISP
>gi|7442522|pir||H65002 histidine transport protein hisP
- Escherichia coli >gi|1788644|gb|AAC75366.1| (AE000319)
ATP-binding component of histidine transport
[Escherichia coli K12] >gi|1799677|dbj|BAA16143.1|
(D90861) histidine transport protein hisP [Escherichia
coli] >gi|1799687|dbj|BAA16152.1| (D90862) histidine
transport protein hisP [Escherichia coli]
Length = 257
Score = 134 bits (335), Expect = 1e-30
Identities = 79/261 (30%), Positives = 145/261 (55%), Gaps = 23/261 (8%)
Query: 1 MTETVLKVENLKKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTI 60
M+E L V +L K + G + + GVS + G+ ++G SG GK+T R I
Sbjct: 1 MSENKLNVIDLHKRY---------GEHEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCI 51
Query: 61 LRLIEPTDGKIIFMGKDVTKLKGEE----------LKWFRRKAQIMFQDPYSSLDPRQTV 110
L +P++G I+ G+ + ++ ++ L+ R + ++FQ + +L TV
Sbjct: 52 NFLEKPSEGSIVVNGQTINLVRDKDGQLKVADKNQLRLLRTRLTMVFQ--HFNLWSHMTV 109
Query: 111 FQIIME-PVKFHGIQVDDPEEFVIRLLESVGLNEMHLYRYPHEFSGGQRQRIALARLLAL 169
+ +ME P++ G+ + E ++ L VG++E +YP SGGQ+QR+++AR LA+
Sbjct: 110 LENVMEAPIQVLGLSKQEARERAVKYLAKVGIDERAQGKYPVHLSGGQQQRVSIARALAM 169
Query: 170 KPEFIVLDEPTSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLG 229
+PE ++ DEPTSALD + +L +++L E+ G T + ++H++G +++S + ++ G
Sbjct: 170 EPEVLLFDEPTSALDPELVGEVLRIMQQLAEE-GKTMVVVTHEMGFARHVSTHVIFLHQG 228
Query: 230 KLVEVGPADRIFENPLHPYTQ 250
K+ E G +++F NP P Q
Sbjct: 229 KIEEEGAPEQLFGNPQSPRLQ 249
>pir||A27835 histidine transport protein hisP - Escherichia coli
>gi|41705|emb|CAA68511.1| (Y00455) P protein (AA 1-257)
[Escherichia coli]
Length = 257
Score = 134 bits (334), Expect = 1e-30
Identities = 79/261 (30%), Positives = 145/261 (55%), Gaps = 23/261 (8%)
Query: 1 MTETVLKVENLKKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTI 60
M+E L V +L K + G + + GVS + G+ ++G SG GK+T R I
Sbjct: 1 MSENKLNVIDLHKRY---------GEHEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCI 51
Query: 61 LRLIEPTDGKIIFMGKDVTKLKGEE----------LKWFRRKAQIMFQDPYSSLDPRQTV 110
L +P++G I+ G+ + ++ ++ L+ R + ++FQ + +L TV
Sbjct: 52 NFLEKPSEGSIVVNGQTINLVRDKDGQLKVADKNQLRLLRTRLTMVFQ--HFNLWSHMTV 109
Query: 111 FQIIME-PVKFHGIQVDDPEEFVIRLLESVGLNEMHLYRYPHEFSGGQRQRIALARLLAL 169
+ +ME P++ G+ + E ++ L VG++E +YP SGGQ+QR+++AR LA+
Sbjct: 110 LENVMEAPIQVLGLSKQEARERAVKYLAKVGIDERAQGKYPVHLSGGQQQRVSIARALAM 169
Query: 170 KPEFIVLDEPTSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLG 229
+PE ++ DEPTSALD + +L +++L E+ G T + ++H++G +++S + ++ G
Sbjct: 170 EPEVLLFDEPTSALDPELVGELLRIMQQLAEE-GKTMVVVTHEMGFARHVSTHVIFLHQG 228
Query: 230 KLVEVGPADRIFENPLHPYTQ 250
K+ E G +++F NP P Q
Sbjct: 229 KIEEEGAPEQLFGNPQSPRLQ 249
>pir||A70180 spermidine/putrescine ABC transporter, ATP-binding protein (potA)
homolog - Lyme disease spirochete
>gi|2688562|gb|AAB91525.1| (AE001165)
spermidine/putrescine ABC transporter, ATP-binding
protein (potA) [Borrelia burgdorferi]
Length = 347
Score = 133 bits (332), Expect = 2e-30
Identities = 77/244 (31%), Positives = 136/244 (55%), Gaps = 15/244 (6%)
Query: 1 MTETVLKVENLKKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTI 60
M +L+++NL Y+ G K +D ++ +IK+ E L+G SGCGKTT + +
Sbjct: 1 MDNCILEIKNLSHYYDNNGN-------KTLDNINLKIKKNEFITLLGPSGCGKTTLIKIL 53
Query: 61 LRLIEPTDGKIIFMGKDVTKLKGEELKWFRRKAQIMFQDPYSSLDPRQTVFQIIMEPVKF 120
+ +G+I F K+++K +R+ +FQ+ +L P VF I ++
Sbjct: 54 GGFLSQKNGEIYFFSKEISKTSPN-----KREINTVFQN--YALFPHMNVFDNISFGLRM 106
Query: 121 HGIQVDDPEEFVIRLLESVGLNEMHLYRYPHEFSGGQRQRIALARLLALKPEFIVLDEPT 180
D +E V L +G+ + + YR +E SGGQ+QR+A+AR + ++P+ ++LDEP
Sbjct: 107 KKTPKDIIKEKVKTSLSLIGMPK-YAYRNINELSGGQKQRVAIARAMVMEPKLLLLDEPL 165
Query: 181 SALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVGPADRI 240
SALD+ ++ + LK++Q + G T+++++HD MSDRI VM G ++++G + I
Sbjct: 166 SALDLKMRQEMQKELKKIQRQLGITFIYVTHDQEEALTMSDRIVVMNEGIILQIGTPEEI 225
Query: 241 FENP 244
+ P
Sbjct: 226 YNEP 229
>emb|CAB76078.1| (AL157953) putative ABC transporter ATP-binding protein
[Streptomyces coelicolor A3(2)]
Length = 368
Score = 130 bits (323), Expect = 3e-29
Identities = 87/260 (33%), Positives = 135/260 (51%), Gaps = 15/260 (5%)
Query: 1 MTET-VLKVENLKKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRT 59
+TET V+ L K + RG V A+DGV ++ GE +G++G+SG GK++ R
Sbjct: 13 VTETHVITTSGLTKVYRSRGRE-----VTALDGVDLHVREGEVYGVIGQSGAGKSSLIRC 67
Query: 60 ILRLIEPTDGKIIFMGKDVTKLKGE------ELKWFRRKAQIMFQDPYSSLDPRQTVFQI 113
+ L PT G + G D+T L G EL+ R + ++FQ + +L +TV
Sbjct: 68 VNLLERPTAGTVTVAGADLTALAGRGPRAGRELRQARSRIGMVFQ--HFNLLSSRTVQDN 125
Query: 114 IMEPVKFHGIQVDDPEEFVIRLLESVGLNEMHLYRYPHEFSGGQRQRIALARLLALKPEF 173
+ P++ G + + LL+ VGL + YP + SGGQ+QR+ +AR LA P+
Sbjct: 126 VELPLEILGKSGKERSRKALELLDLVGLADK-ARAYPAQLSGGQKQRVGIARALAGDPKV 184
Query: 174 IVLDEPTSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVE 233
++ DE TSALD +IL L++L + G T L I+H++ VVK + D +M G++VE
Sbjct: 185 LLSDEATSALDPETTRSILQLLRDLNRQLGLTVLLITHEMDVVKSICDSAALMDRGRVVE 244
Query: 234 VGPADRIFENPLHPYTQMLF 253
G + P LF
Sbjct: 245 SGTVGELLATPGSELAAALF 264
>gb|AAC05643.1| (AF033673) unknown [Pseudomonas marginalis pv. alfalfae]
Length = 254
Score = 128 bits (319), Expect = 8e-29
Identities = 80/257 (31%), Positives = 145/257 (56%), Gaps = 6/257 (2%)
Query: 1 MTETVLKVENLKKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTI 60
M+E V + + + ++G+ + G + ++ +K+GE L G SG GK+TT R +
Sbjct: 1 MSERVKQPVSPEGIIQMQGVNKWYGQFHVLKDINLNVKQGERIVLCGPSGSGKSTTIRCL 60
Query: 61 LRLIEPTDGKIIFMGKDVTKLKGEELKWFRRKAQIMFQDPYSSLDPRQTVFQ-IIMEPVK 119
RL E G+I+ G ++T ++++ RR+ ++FQ + +L P T+ Q + P+
Sbjct: 61 NRLEEHQQGRIVVDGVELTN-DLKQIEAIRREVGMVFQ--HFNLFPHLTILQNCTLAPMW 117
Query: 120 FHGIQVDDPEEFVIRLLESVGLNEMHLYRYPHEFSGGQRQRIALARLLALKPEFIVLDEP 179
+ EE + LE V + E +++P + SGGQ+QR+A+AR L +KP+ ++ DEP
Sbjct: 118 VRKMPKRKAEEIAMHYLERVRIPEQ-AHKFPGQLSGGQQQRVAIARALCMKPKIMLFDEP 176
Query: 180 TSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVGPADR 239
TSALD + +L+T+ L E G T L ++H++G + +++R+ M G++VE +
Sbjct: 177 TSALDPEMVKEVLDTMIGLAE-DGMTMLCVTHEMGFARTVANRVIFMDKGEIVEQAAPND 235
Query: 240 IFENPLHPYTQMLFSAI 256
F+NP + T++ S I
Sbjct: 236 FFDNPQNDRTKLFLSQI 252
>sp|P55662|Y4TH_RHISN PROBABLE AMINO-ACID ABC TRANSPORTER ATP-BINDING PROTEIN Y4TH
>gi|2182638|gb|AAB91861.1| (AE000098) Y4tH [Rhizobium
sp. NGR234]
Length = 257
Score = 127 bits (315), Expect = 2e-28
Identities = 77/266 (28%), Positives = 142/266 (52%), Gaps = 22/266 (8%)
Query: 1 MTETVLKVENLKKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTI 60
M+++++ + +KK + G ++ + FE++RGE ++G SG GK+T R +
Sbjct: 1 MSDSIIVFDKVKKAY---------GNFTVINELDFEVRRGEKVSIIGPSGSGKSTVLRIL 51
Query: 61 LRLIEPTDGKIIFMGKDVT-KLKG--------EELKWFRRKAQIMFQDPYSSLDPRQTVF 111
+ L DG + G+ + +LK + L+ R + ++FQ +L P TV
Sbjct: 52 MTLEGINDGAVYVGGEPLWHELKNGSMMPATEKHLRKMRTQLGMVFQQ--FNLFPHMTVL 109
Query: 112 QIIME-PVKFHGIQVDDPEEFVIRLLESVGLNEMHLYRYPHEFSGGQRQRIALARLLALK 170
+ + E P G+ ++ LLE VGL + H +++P + SGGQ+QR+ +AR LA++
Sbjct: 110 RNLTEAPRVVLGLSKEEARRRAEELLELVGLVD-HAHKFPAQLSGGQQQRVGIARALAMR 168
Query: 171 PEFIVLDEPTSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGK 230
P+ ++ DEPTSALD + +LN ++ L +H T L ++H++ + +SDR+ G+
Sbjct: 169 PKIMLFDEPTSALDPELVGEVLNVIRRLAAEHDLTMLMVTHEMRFAREISDRVCFFDKGR 228
Query: 231 LVEVGPADRIFENPLHPYTQMLFSAI 256
+ E G +++F P T+ A+
Sbjct: 229 IREEGTPEQLFSQPKEERTREFLKAV 254
>sp|Q52815|AAPP_RHILV GENERAL L-AMINO ACID TRANSPORT ATP-BINDING PROTEIN AAPP
>gi|1154897|emb|CAA57936.1| (X82596) general amino acid
ABC type transporter [Rhizobium leguminosarum]
Length = 257
Score = 125 bits (310), Expect = 9e-28
Identities = 79/256 (30%), Positives = 139/256 (53%), Gaps = 15/256 (5%)
Query: 2 TETVLKVENLKKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTIL 61
TE +++ N+ K++ G + ++ ++ RGE + G SG GK+T R I
Sbjct: 14 TEVAVEIVNMNKWY---------GDFHVLRDINLKVMRGERIVIAGPSGSGKSTMIRCIN 64
Query: 62 RLIEPTDGKIIFMGKDVTKLKGEELKWFRRKAQIMFQDPYSSLDPRQTVFQ-IIMEPVKF 120
RL E GKI+ G ++T +++ RR+ ++FQ + +L P T+ + + P+
Sbjct: 65 RLEEHQKGKIVVDGTELTN-DLKKIDEVRREVGMVFQ--HFNLFPHLTILENCTLAPIWV 121
Query: 121 HGIQVDDPEEFVIRLLESVGLNEMHLYRYPHEFSGGQRQRIALARLLALKPEFIVLDEPT 180
+ EE + L+ V + E +YP + SGGQ+QR+A+AR L + P+ ++ DEPT
Sbjct: 122 RKMPKKQAEEVAMHFLKRVKIPEQ-ANKYPGQLSGGQQQRVAIARSLCMNPKIMLFDEPT 180
Query: 181 SALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVGPADRI 240
SALD + +L+T+ L E+ G T L ++H++G + +++R+ M G++VE
Sbjct: 181 SALDPEMIKEVLDTMVGLAEE-GMTMLCVTHEMGFARQVANRVIFMDQGQIVEQNEPAAF 239
Query: 241 FENPLHPYTQMLFSAI 256
F+NP H T++ S I
Sbjct: 240 FDNPQHERTKLFLSQI 255
>dbj|BAB04188.1| (AP001508) phosphonates transport system [Bacillus halodurans]
Length = 247
Score = 125 bits (310), Expect = 9e-28
Identities = 82/244 (33%), Positives = 134/244 (54%), Gaps = 27/244 (11%)
Query: 1 MTETVLKVENLKKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTI 60
M E +L+VE LKK +P T+G + ++ I+RGE ++G SG GK+T R+I
Sbjct: 1 MGEMILRVEGLKKVYPDG----TVG----IKEINTSIRRGELISVIGPSGAGKSTFLRSI 52
Query: 61 LRLIEPTDGKIIFMGKDVTKLKGEELKWFRRKAQIMFQDPYSSLDPRQTVFQII------ 114
RL+EPT G I G+++ +G++L+ RRK ++FQ + +L R +V Q +
Sbjct: 53 NRLVEPTSGAIFVEGENICNARGKKLRQMRRKIGMVFQ--HYNLIKRSSVLQNVLHGRLG 110
Query: 115 -MEPVK-----FHGIQVDDPEEFVIRLLESVGLNEMHLYRYPHEFSGGQRQRIALARLLA 168
M +K FH + + + +L+ VGL E L R E SGGQ+QR+ +AR +A
Sbjct: 111 YMSTIKGGLGRFH----ESDTKRALSILKRVGLEEQALKR-ADELSGGQQQRVGIARAIA 165
Query: 169 LKPEFIVLDEPTSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYL 228
P I+ DEP ++LD + N+L+ +K + ++ G T + H + K +DR+ +
Sbjct: 166 QNPTLILADEPIASLDPTASENVLHYMKTICQEEGITTVVNLHQVEFAKKFADRMIGIKA 225
Query: 229 GKLV 232
GK+V
Sbjct: 226 GKIV 229
>pir||B75082 phosphate abc transporter, ATP-binding protein (pstb) PAB0700 -
Pyrococcus abyssi (strain Orsay)
>gi|5458471|emb|CAB49959.1| (AJ248286) phosphate ABC
transporter, ATP-binding protein (pstB) [Pyrococcus
abyssi]
Length = 280
Score = 124 bits (309), Expect = 1e-27
Identities = 77/259 (29%), Positives = 139/259 (52%), Gaps = 23/259 (8%)
Query: 1 MTETVLKVENLKKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTI 60
M E ++ NL+ Y+ G + + G++ +I + F L+G SGCGK+T R
Sbjct: 28 MKEFAIETRNLRIYY---------GSNEVIKGINLKIPKNVVFALMGPSGCGKSTLLRAF 78
Query: 61 LRLIE-----PTDGKIIFMGKDVTKLKGEELKWFRRKAQIMFQDPYSSLDPRQTVFQIIM 115
RL++ +G++ G ++ + ++ RR+ ++FQ Y + P T+++ +
Sbjct: 79 NRLLDLNPEAKVEGEVRISGVNIYSPDVDPIR-VRREVGMVFQ--YPNPFPHLTIYENVA 135
Query: 116 EPVKFHGI----QVDDPEEFVIRLLESVGLNEMHLYRYPHEFSGGQRQRIALARLLALKP 171
VK +G+ ++D+ ++ ++ + L YP SGGQ+QR+ +AR+LA+KP
Sbjct: 136 IGVKLNGLAKGKELDEIVKWALKKATLWDEVKNRLKDYPANLSGGQKQRLVIARVLAMKP 195
Query: 172 EFIVLDEPTSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKL 231
+ I++DEPT+ +D I L EL K +T + ++H +SD + +Y+GK+
Sbjct: 196 KIILMDEPTANIDPVGTRKIEELLFEL--KKDYTIVLVTHSPAQAARVSDYVAFIYMGKI 253
Query: 232 VEVGPADRIFENPLHPYTQ 250
VEVGP ++FENP H T+
Sbjct: 254 VEVGPTRKVFENPEHELTE 272
>pir||H70682 probable cysA - Mycobacterium tuberculosis (strain H37RV)
>gi|1655663|emb|CAB03729.1| (Z81368) cysA [Mycobacterium
tuberculosis]
Length = 351
Score = 120 bits (298), Expect = 2e-26
Identities = 84/265 (31%), Positives = 134/265 (49%), Gaps = 18/265 (6%)
Query: 1 MTETVLKVENLKKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTI 60
MT ++ + K+Y G A+D V F + G L+G SG GK+T RTI
Sbjct: 1 MTYAIVVADATKRY----------GDFVALDHVDFVVPTGSLTALLGPSGSGKSTLLRTI 50
Query: 61 LRLIEPTDGKIIFMGKDVTKLKGEELKWFRRKAQIMFQDPYSSLDPRQTVFQIIMEPVKF 120
L +P G I G+DVT++ + RR +FQ Y++ TV + +K
Sbjct: 51 AGLDQPDTGTITINGRDVTRVPPQ-----RRGIGFVFQH-YAAFK-HLTVRDNVAFGLKI 103
Query: 121 HGIQVDDPEEFVIRLLESVGLNEMHLYRYPHEFSGGQRQRIALARLLALKPEFIVLDEPT 180
+ + V LL+ VGL+ RYP++ SGGQRQR+ALAR LA+ PE ++LDEP
Sbjct: 104 RKRPKAEIKAKVDNLLQVVGLSGFQS-RYPNQLSGGQRQRMALARALAVDPEVLLLDEPF 162
Query: 181 SALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVGPADRI 240
ALD V+ + L+ L ++ T + ++HD ++DRI V++ G++ +VG +
Sbjct: 163 GALDAKVREELRAWLRRLHDEVHVTTVLVTHDQAEALDVADRIAVLHKGRIEQVGSPTDV 222
Query: 241 FENPLHPYTQMLFSAIPIPDPDLAR 265
++ P + + A+ + L R
Sbjct: 223 YDAPANAFVMSFLGAVSTLNGSLVR 247
>dbj|BAB06933.1| (AP001518) ABC transporter (ATP-binding protein) [Bacillus
halodurans]
Length = 318
Score = 116 bits (289), Expect = 3e-25
Identities = 81/268 (30%), Positives = 128/268 (47%), Gaps = 16/268 (5%)
Query: 1 MTETVLKVENLKKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTI 60
M E ++K+ + K + AVD +S I++GE FGL+G +G GKTT+ +
Sbjct: 1 MEEAIIKLNEITKRYDDH---------YAVDHLSLSIRKGEIFGLLGPNGAGKTTSILMM 51
Query: 61 LRLIEPTDGKIIFMGKDVTKLKGEELKWFRRKAQIMFQDPYSSLDPRQTVFQIIMEPVKF 120
L L EPT G + G D TK E K ++ + P T + ++
Sbjct: 52 LGLSEPTSGTVQVAGIDSTKYPIEV------KRKVGYLPDNVGFYPDMTGMENLLYTASL 105
Query: 121 HGIQVDDPEEFVIRLLESVGLNEMHLYRYPHEFSGGQRQRIALARLLALKPEFIVLDEPT 180
+GIQ + E LLE VGL E + ++S G +QR+ LA +L PE I+LDEPT
Sbjct: 106 NGIQKIEAIERANTLLEKVGLTEA-AKKKTGQYSRGMKQRLGLADVLMKGPEIIILDEPT 164
Query: 181 SALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVGPADRI 240
+D + L+ ++ L + T L SH L V+ + DR+G+ GKL+ G D++
Sbjct: 165 LGIDPEGVRDFLHLIRNLNQNENLTVLLCSHHLHQVQQVCDRVGIFVDGKLLAYGDLDQL 224
Query: 241 FENPLHPYTQMLFSAIPIPDPDLAREMK 268
+ + ++ A D L ++K
Sbjct: 225 VKRLFKHESVVIHVAASPIDESLLNQLK 252
>sp|P55453|Y4FO_RHISN PUTATIVE ABC TRANSPORTER ATP-BINDING PROTEIN Y4FO
>gi|2182398|gb|AAB91671.1| (AE000073) Y4fO [Rhizobium
sp. NGR234]
Length = 339
Score = 113 bits (281), Expect = 2e-24
Identities = 76/248 (30%), Positives = 125/248 (49%), Gaps = 17/248 (6%)
Query: 1 MTETVLKVENLKKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTI 60
M ++VL + L FP + V ++ ++ G L+G SG GK++ RTI
Sbjct: 8 MADSVLSLNKLDVGFP---------GMTVVRDLNLDVADGAFVSLLGPSGSGKSSVLRTI 58
Query: 61 LRLIEPTDGKIIFMGKDVTKLKGEELKWFRRKAQIMFQDPYSSLDPRQTVFQIIMEPVKF 120
L+ G+++ G+D+T L E RR I+FQ+ +L P + F+ I ++
Sbjct: 59 AGLLPALGGRVLLEGQDITALPPE-----RRNVGIVFQN--YALFPTMSAFENIAFALRV 111
Query: 121 HGIQVDDPEEFVIRLLESVGLNEMHLYRYPHEFSGGQRQRIALARLLALKPEFIVLDEPT 180
+ E V + E G+++ L + P SGGQ+QR+A+AR L ++ DEP
Sbjct: 112 AKKSKAEVERRVGEVAEMAGISDQ-LDKKPANMSGGQQQRVAIARALVTGSRVLLFDEPL 170
Query: 181 SALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVGPADRI 240
S LD V+A + +K LQ + GFT +F++HD MSD I V+ GK+ ++G +
Sbjct: 171 SNLDAKVRAAMRKEIKRLQSELGFTAIFVTHDQEDALTMSDLIVVLNHGKIEQIGDGRTL 230
Query: 241 FENPLHPY 248
+ P P+
Sbjct: 231 YRKPATPF 238
>gb|AAK41516.1| Oligo/dipeptide transport, ATP binding protein . carboxy-end
fragment. (dppF-2) [Sulfolobus solfataricus]
Length = 103
Score = 113 bits (279), Expect = 4e-24
Identities = 51/102 (50%), Positives = 68/102 (66%), Gaps = 5/102 (4%)
Query: 222 RIGVMYLGKLVEVGPADRIFENPLHPYTQMLFSAIPIPDPDLAREMKKKRMKVTGEPPSP 281
RIGVMYLGK+VE+G + + PLHPYTQ L A+P+PDPD+ K + GE SP
Sbjct: 7 RIGVMYLGKVVEIGTPEEVISEPLHPYTQALLQAVPVPDPDIG----IKEPNIKGEIQSP 62
Query: 282 INPPKGCRFHPRCPYAKAGLCDKEEPPMVEVEKDHYVACWLY 323
+ PKGC F+ RCP+AK +C ++ P + ++ DHYVAC LY
Sbjct: 63 LELPKGCVFYSRCPFAK-DICKEKPPEIKRIKGDHYVACHLY 103
>pir||T34822 ABC-transporter ATP binding protein - Streptomyces coelicolor
>gi|2815356|emb|CAA16479.1| (AL021530) ABC-transporter
ATP binding protein [Streptomyces coelicolor A3(2)]
Length = 230
Score = 112 bits (277), Expect = 7e-24
Identities = 78/234 (33%), Positives = 124/234 (52%), Gaps = 10/234 (4%)
Query: 1 MTETVLKVENLKKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTI 60
+TET+++VE+++K + R V A+ GVSF++ RGE L G SG GKTT +
Sbjct: 5 VTETMVRVEDVRKSYG-----RDSAAVHALRGVSFDVPRGELIALKGRSGSGKTTLLNIV 59
Query: 61 LRLIEPTDGKIIFMGKDVTKLKGEELKWFRR-KAQIMFQDPYSSLDPRQTVFQIIMEPVK 119
L P G++ G+D+ +L + L RR + +FQ L P T + + P++
Sbjct: 60 GGLDTPDAGRVEVDGRDLAELDEDGLLALRRDRVGFVFQS--FGLIPILTAAENVGVPMR 117
Query: 120 FHGIQVDDPEEFVIRLLESVGLNEMHLYRYPHEFSGGQRQRIALARLLALKPEFIVLDEP 179
+ EE V LL VGL + H + P E SGGQ+QR+A+AR LA P ++ DEP
Sbjct: 118 LRRAAAREREERVELLLSLVGLAD-HAAQRPGEMSGGQQQRVAIARALANNPALLIADEP 176
Query: 180 TSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVE 233
T LD +++ L+ + T L +HD ++ ++DR+ + G++VE
Sbjct: 177 TGQLDAETGHSVMELLRAVVRSEQVTALVATHDATLLD-LADRVLELRDGEIVE 229
>sp|P35116|NOCP_AGRTU NOPALINE PERMEASE ATP-BINDING PROTEIN P >gi|281664|pir||G42600
ABC-type transport protein nocP - Agrobacterium
tumefaciens plasmid pTiC583 >gi|154752|gb|AAA50510.1|
(M77785) transport protein [Agrobacterium tumefaciens]
Length = 257
Score = 110 bits (272), Expect = 3e-23
Identities = 74/264 (28%), Positives = 134/264 (50%), Gaps = 20/264 (7%)
Query: 2 TETVLKVENLKKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTIL 61
T+ L E++ K F G ++ + G+S +G+ ++G SG GK+T R +
Sbjct: 4 TQPTLVAEDVHKNF---------GTLEILKGISLTANKGDVVSIIGSSGSGKSTFLRCMN 54
Query: 62 RLIEPTDGKIIFMGKDVT-------KLKGEELKWFRR-KAQIMFQDPYSSLDPRQTVFQI 113
L P G+I ++V +L G + K R + Q+ +L TV Q
Sbjct: 55 FLETPNKGRIAVGQEEVVVKTDAAGRLIGVDRKKIERMRMQLGMVFQSFNLWGHMTVLQN 114
Query: 114 IME-PVKFHGIQVDDPEEFVIRLLESVGLNEMHLYRYPHEFSGGQRQRIALARLLALKPE 172
+ME P+ + + + L+ VG+ H YP + SGGQ+QR+++AR LA++P
Sbjct: 115 VMEGPLHVLKQPKGEVRDRAMDFLDKVGIANKHA-AYPSQLSGGQQQRVSIARALAMQPS 173
Query: 173 FIVLDEPTSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLV 232
++ DEPTSALD + +L +++L E+ G T + ++H++G + +S ++ + G++
Sbjct: 174 ALLFDEPTSALDPELVGEVLKVIRKLAEE-GRTMVVVTHEMGFARDVSSKVLFLEKGQIE 232
Query: 233 EVGPADRIFENPLHPYTQMLFSAI 256
E G +F+NP P + S++
Sbjct: 233 EQGTPQEVFQNPTSPRCRAFLSSV 256
>sp|P45247|LOLD_HAEIN LIPOPROTEIN RELEASING SYSTEM ATP-BINDING PROTEIN LOLD
>gi|1074192|pir||A64129 probable ABC-type transport
protein HI1549 - Haemophilus influenzae (strain Rd KW20)
>gi|1574394|gb|AAC23199.1| (U32830) ABC transporter,
ATP-binding protein [Haemophilus influenzae Rd]
Length = 227
Score = 109 bits (269), Expect = 6e-23
Identities = 70/233 (30%), Positives = 121/233 (51%), Gaps = 8/233 (3%)
Query: 1 MTETVLKVENLKKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTI 60
M +LK EN+ K++ G +T + + GVSF ++ E +VG SG GK+T T+
Sbjct: 1 MNNYLLKCENINKFYQ-EGENQT----QVLKGVSFSMEPAELVAIVGSSGSGKSTLLHTL 55
Query: 61 LRLIEPTDGKIIFMGKDVTKLKGEELKWFRRKAQIMFQDPYSSLDPRQTVFQIIMEPVKF 120
L +P+ G++ G+ + K EL R + + F + L T + +M P+
Sbjct: 56 GGLDQPSSGEVFINGQSLQKASANELAALRNR-YLGFVYQFHHLMADFTALENVMMPMLI 114
Query: 121 HGIQVDDPEEFVIRLLESVGLNEMHLYRYPHEFSGGQRQRIALARLLALKPEFIVLDEPT 180
+ ++ ++L +VGL+ +R P SGG+RQR+A+AR L P ++ DEPT
Sbjct: 115 GHQNKTEAKDRAEKMLSAVGLSHRITHR-PSALSGGERQRVAIARALVNNPSLVLADEPT 173
Query: 181 SALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVE 233
LD +I +++L ++ +L ++HD+G+ + +S R+ VM G L E
Sbjct: 174 GNLDHKTTESIFELIQQLNQEQNIAFLLVTHDMGLAEKLSRRL-VMQDGLLKE 225
>gi|10954825 Probable nocP gene [Agrobacterium tumefaciens]
>gi|6498178|dbj|BAA87630.1| (AB016260) Probable nocP
gene [Agrobacterium tumefaciens]
Length = 257
Score = 108 bits (267), Expect = 1e-22
Identities = 73/264 (27%), Positives = 133/264 (49%), Gaps = 20/264 (7%)
Query: 2 TETVLKVENLKKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTIL 61
T+ L E++ K F G ++ + G+S +G+ ++G SG GK+T R +
Sbjct: 4 TQPTLVAEDVHKNF---------GTLEVLKGISLTANKGDVVSIIGSSGSGKSTFLRCMN 54
Query: 62 RLIEPTDGKIIFMGKDVT-------KLKGEELKWFRR-KAQIMFQDPYSSLDPRQTVFQI 113
L P G+I ++V +L G + K R + Q+ +L TV Q
Sbjct: 55 FLETPNKGRIAVGQEEVVVKTDAAGRLIGVDRKKIERMRMQLGMVFQSFNLWGHMTVLQN 114
Query: 114 IME-PVKFHGIQVDDPEEFVIRLLESVGLNEMHLYRYPHEFSGGQRQRIALARLLALKPE 172
+ME P+ + + + L+ VG+ H YP + SGGQ+QR+++AR LA++P
Sbjct: 115 VMEGPLHVLKQPKGEVRDRAMDFLDKVGIANKHA-AYPSQLSGGQQQRVSIARALAMQPS 173
Query: 173 FIVLDEPTSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLV 232
++ DEPTSALD + +L +++L E+ G T + ++H++G + +S ++ + G++
Sbjct: 174 ALLFDEPTSALDPELVGEVLKVIRKLAEE-GRTMVVVTHEMGFARDVSSKVLFLEKGQIE 232
Query: 233 EVGPADRIFENPLHPYTQMLFSAI 256
G +F+NP P + S++
Sbjct: 233 TQGTPQEVFQNPTSPRCRAFLSSV 256
>sp|P57031|LOLD_NEIMB LIPOPROTEIN RELEASING SYSTEM ATP-BINDING PROTEIN LOLD
>gi|11277321|pir||C81107 ABC transporter, ATP-binding
protein NMB1234 [imported] - Neisseria meningitidis
(group B strain MD58) >gi|7226473|gb|AAF41615.1|
(AE002471) ABC transporter, ATP-binding protein
[Neisseria meningitidis MC58]
Length = 231
Score = 106 bits (263), Expect = 3e-22
Identities = 67/212 (31%), Positives = 113/212 (52%), Gaps = 7/212 (3%)
Query: 1 MTETVLKVENLKKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTI 60
M+E +LK E + K + GL V+ + G+ EI GE+ G++G SG GK+T +
Sbjct: 1 MSELILKCEGVGKRYRDGGLD-----VRVLHGLDLEIHAGESTGIIGSSGSGKSTLLHIL 55
Query: 61 LRLIEPTDGKIIFMGKDVTKLKGEELKWFRRKAQIMFQDPYSSLDPRQTVFQIIMEPVKF 120
L P++G+++ MG+D+ L L R + + F + L P + + +M P+
Sbjct: 56 GGLDMPSEGRVLLMGEDLRTLNQRRLGDLRNR-HLGFVYQFHHLLPEFSALENVMMPLLI 114
Query: 121 HGIQVDDPEEFVIRLLESVGLNEMHLYRYPHEFSGGQRQRIALARLLALKPEFIVLDEPT 180
++ E + +LE VGL +R E SGG+RQR A+AR L +P+ ++ DEPT
Sbjct: 115 GKKSREEAAEAAMAMLEKVGLKHRSTHR-AGELSGGERQRAAIARALVTQPKCLLADEPT 173
Query: 181 SALDVSVQANILNTLKELQEKHGFTYLFISHD 212
LD + N+L+ + EL+ + G + ++HD
Sbjct: 174 GNLDRANARNVLDMMLELKTELGTGLVVVTHD 205
>sp|P57030|LOLD_NEIMA LIPOPROTEIN RELEASING SYSTEM ATP-BINDING PROTEIN LOLD
>gi|11346330|pir||C81909 probable ABC-transporter
ATP-binding protein NMA1402 [imported] - Neisseria
meningitidis (group A strain Z2491)
>gi|7380061|emb|CAB84642.1| (AL162755) putative
ABC-transporter ATP-binding protein [Neisseria
meningitidis Z2491]
Length = 231
Score = 106 bits (262), Expect = 4e-22
Identities = 67/212 (31%), Positives = 113/212 (52%), Gaps = 7/212 (3%)
Query: 1 MTETVLKVENLKKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTI 60
M+E +LK E + K + GL V + G+ EI+ GE+ G++G SG GK+T +
Sbjct: 1 MSELILKCEGVGKRYRDGGLD-----VLVLHGLDLEIRAGESTGIIGSSGSGKSTLLHIL 55
Query: 61 LRLIEPTDGKIIFMGKDVTKLKGEELKWFRRKAQIMFQDPYSSLDPRQTVFQIIMEPVKF 120
L P++G+++ MG+D+ L L R + + F + L P + + +M P+
Sbjct: 56 GGLDMPSEGRVLLMGEDLRTLNQRRLGDLRNR-HLGFVYQFHHLLPEFSALENVMMPLLI 114
Query: 121 HGIQVDDPEEFVIRLLESVGLNEMHLYRYPHEFSGGQRQRIALARLLALKPEFIVLDEPT 180
++ E + +LE VGL +R E SGG+RQR A+AR L +P+ ++ DEPT
Sbjct: 115 GKKSREEAAEAAMAMLEKVGLKHRSTHR-AGELSGGERQRAAIARALVTQPKCLLADEPT 173
Query: 181 SALDVSVQANILNTLKELQEKHGFTYLFISHD 212
LD + N+L+ + EL+ + G + ++HD
Sbjct: 174 GNLDRANARNVLDMMLELKTELGTGLVVVTHD 205
>emb|CAC11370.1| (AL445063) gliding motility protein related [Thermoplasma
acidophilum]
Length = 305
Score = 106 bits (262), Expect = 4e-22
Identities = 75/239 (31%), Positives = 126/239 (52%), Gaps = 25/239 (10%)
Query: 1 MTETVLKVENLKKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTI 60
M + V++VE+L++ + G VD VSF + +GE +GL+G++G GKTTT RT+
Sbjct: 1 MPDKVIEVEHLRQTYD--------GRTFVVDDVSFYVLKGEIYGLLGKNGAGKTTTIRTM 52
Query: 61 LRLIEPTDGKIIFMGKDVTKLKGEELKWFRRKAQIMFQDPYSSLDPRQTVFQIIMEPVKF 120
++ GK+ +G DV+ E + RR+ ++ Q+ S D F + +K
Sbjct: 53 TTILPVHYGKVRILGMDVS----ENAEKIRRRIGVVLQN--ESFD-----FASVERNLKV 101
Query: 121 HGIQVDDPEEF----VIRLLESVGLNEMHLYRYPHEFSGGQRQRIALARLLALKPEFIVL 176
+G+ D P E + +LE L ++ R E SGGQ++R+ +AR + + L
Sbjct: 102 YGMLWDVPREVLKARIEEVLEVFDLGQLRKVR-AMELSGGQKKRLQVAREFLHDMDLLFL 160
Query: 177 DEPTSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVG 235
DEPT LD ++ ++LN +++ K G T L+ + + Y+ DRI +M GK+V G
Sbjct: 161 DEPTVGLDPIMRRSVLNYIRDKARK-GLTVLYTTQIMEEADYLCDRIAIMNRGKIVAEG 218
>gb|AAG19353.1| (AE005030) spermidine/putrescine ABC transporter ATP-binding; PotA1
[Halobacterium sp. NRC-1]
Length = 377
Score = 106 bits (261), Expect = 5e-22
Identities = 80/247 (32%), Positives = 132/247 (53%), Gaps = 23/247 (9%)
Query: 2 TETVLKVENLKKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTIL 61
++TVL+++ + K + G AV +S ++ GE L+G SGCGKTTT R +
Sbjct: 23 SDTVLELDGVTKEY---------GAETAVRDLSLSVREGELLTLLGPSGCGKTTTLRMLA 73
Query: 62 RLIEPTDGKIIFMGKDVTKLKGEE--LKWFRRKAQIMFQDPYSSLDPRQTVFQIIMEPVK 119
L PT G I D ++ G + + R+ I+FQD +L P +V E V
Sbjct: 74 GLERPTGGTIEL---DAQRVAGPDTFVAAEDREIGIVFQD--FALFPHLSV----AENVA 124
Query: 120 FHGIQVDDPEEFVIRLLESVGLNEMHLY--RYPHEFSGGQRQRIALARLLALKPEFIVLD 177
F G+ D + R+ E + L +M R + SGGQ+QR+A+AR LA +P+ ++LD
Sbjct: 125 F-GLTDRDEDATAARVDEMLALVDMPEMGDRSVDQLSGGQQQRVAVARSLAPEPDILLLD 183
Query: 178 EPTSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVGPA 237
EP S LDV ++ + ++ + ++ G T + ++HD +SDR+ V+ G + +VG
Sbjct: 184 EPFSNLDVRLRVEMREEVRRILKEAGVTAVSVTHDQEEALSISDRVAVLNDGCIEQVGDP 243
Query: 238 DRIFENP 244
+ +FE+P
Sbjct: 244 EGVFEHP 250
>sp|P55604|Y4OS_RHISN PROBABLE ABC TRANSPORTER ATP-BINDING PROTEIN Y4OS
>gi|2182563|gb|AAB91805.1| (AE000089) Y4oS [Rhizobium
sp. NGR234]
Length = 371
Score = 105 bits (259), Expect = 9e-22
Identities = 76/246 (30%), Positives = 126/246 (50%), Gaps = 10/246 (4%)
Query: 1 MTETVL--KVENLKKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGR 58
M T+L K E IR + + G + + +SF I+ GE LVG SGCGK+T R
Sbjct: 4 MVGTILRRKAEQNMTDVTIRNVTKRYGALTVIPQLSFRIEDGEFVVLVGPSGCGKSTLLR 63
Query: 59 TILRLIEPTDGKIIFMGKDVTKLKGEELKWFRRKAQIMFQDPYSSLDPRQTVFQIIMEPV 118
+ L E + G ++ MG DV + + R I+FQ+ +L P TV + + +
Sbjct: 64 MLAGLEEISGGDLL-MGADVINDRPAK----ERDMAIVFQN--YALYPHMTVAENMGFAL 116
Query: 119 KFHGIQVDDPEEFVIRLLESVGLNEMHLYRYPHEFSGGQRQRIALARLLALKPEFIVLDE 178
K + +E V + +GL ++ L RYP SGGQRQR+A+ R + P+ + DE
Sbjct: 117 KLRKRPRAEIDERVDKAAAILGLGKL-LDRYPRALSGGQRQRVAMGRAIVRDPQVFLFDE 175
Query: 179 PTSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVGPAD 238
P S LD ++ + +K L ++ T ++++HD M+D+I VM G++ ++G
Sbjct: 176 PLSNLDAKLRVQMRAEIKALHQRLKITTVYVTHDQIEAMTMADKIVVMNEGRVEQMGTPL 235
Query: 239 RIFENP 244
+++ P
Sbjct: 236 ELYDRP 241
>sp|P57383|LOLD_BUCAI LIPOPROTEIN RELEASING SYSTEM ATP-BINDING PROTEIN LOLD
>gi|10038971|dbj|BAB13006.1| (AP001118) hypothetical ABC
transporter ATP-binding protein ycfv [Buchnera sp. APS]
Length = 228
Score = 105 bits (259), Expect = 9e-22
Identities = 64/218 (29%), Positives = 108/218 (49%), Gaps = 9/218 (4%)
Query: 1 MTETVLKVENLKKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTI 60
M ++K NL K + TI + +SF++ +G+ G++G+SG GKTT +
Sbjct: 1 MNNIIIKCINLNKSYKDGDFTYTI-----LKNISFQLNKGDIAGIIGKSGSGKTTFLHLL 55
Query: 61 LRLIEPTDGKIIFMGKDVTKLKGEELKWFRR-KAQIMFQDPYSSLDPRQTVFQIIMEPVK 119
L PT G I+F G+ + + ++ FR + ++Q + LD + + + P+
Sbjct: 56 AGLENPTSGDILFNGRLFSSMSSNKMSKFRNIELGFIYQFHHLMLD--FNILENVSMPLL 113
Query: 120 FHGIQVDDPEEFVIRLLESVGLNEMHLYRYPHEFSGGQRQRIALARLLALKPEFIVLDEP 179
D EE +L+ L + + +YP E SGG+RQR+A+AR KP I+ DEP
Sbjct: 114 ISNKSKKDSEEIAYNMLKKFNLEDK-IKKYPSELSGGERQRVAVARAFINKPSLIIADEP 172
Query: 180 TSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVK 217
T LD I N + EL + +++ +HD ++K
Sbjct: 173 TGNLDEDNTNIIFNLITELNSDYNTSFIIATHDPTLIK 210
>pir||T45204 probable sugar ABC transporter ugpC [imported] - Mycobacterium
leprae >gi|699112|gb|AAA62878.1| (U15180) ugpC gene
product [Mycobacterium leprae]
Length = 392
Score = 104 bits (257), Expect = 1e-21
Identities = 73/246 (29%), Positives = 122/246 (48%), Gaps = 18/246 (7%)
Query: 1 MTETVLKVENLKKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTI 60
M E VL E++ K +P AV +S + GE L+G SGCGKTTT I
Sbjct: 1 MAEIVL--EHVNKNYP--------NGATAVHDLSITVADGEFLILIGPSGCGKTTTLNMI 50
Query: 61 LRLIEPTDGKIIFMGKDVTKLKGEELKWFRRKAQIMFQDPYSSLDPRQTVFQIIMEPVKF 120
L + + G++ G V + ++ R ++FQ +L P TV Q I P+
Sbjct: 51 AGLEDISSGELRIDGDRVNEKAPKD-----RDIAMVFQS--YALYPHMTVRQNIAFPLML 103
Query: 121 HGIQVDDPEEFVIRLLESVGLNEMHLYRYPHEFSGGQRQRIALARLLALKPEFIVLDEPT 180
++ + + V + + L ++ L R P + SGGQRQR+A+ R + P+ ++DEP
Sbjct: 104 AKVKKAEIAQKVSETAQILDLTDL-LDRKPSQLSGGQRQRVAMGRAIVRHPKAFLMDEPL 162
Query: 181 SALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVGPADRI 240
S LD ++ + LQ + G T ++++HD + DR+ VM G + ++G D +
Sbjct: 163 SNLDAKLRVRTRGEIARLQRRLGATTVYVTHDQTEAMTLGDRVVVMRSGVVQQIGTPDEL 222
Query: 241 FENPLH 246
+E P++
Sbjct: 223 YERPVN 228
>sp|P75957|YCFV_ECOLI HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PROTEIN YCFV
Length = 233
Score = 103 bits (255), Expect = 3e-21
Identities = 71/223 (31%), Positives = 112/223 (49%), Gaps = 7/223 (3%)
Query: 1 MTETVLKVENLKKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTI 60
M + +L+ +NL K + G +T + VSF + GE +VG SG GK+T +
Sbjct: 1 MNKILLQCDNLCKRYQ-EGSVQT----DVLHNVSFSVGEGEMMAIVGSSGSGKSTLLHLL 55
Query: 61 LRLIEPTDGKIIFMGKDVTKLKGEELKWFRRKAQIMFQDPYSSLDPRQTVFQIIMEPVKF 120
L PT G +IF G+ ++KL K R ++ F + L P T + + P+
Sbjct: 56 GGLDTPTSGDVIFNGQPMSKLSSAA-KAELRNQKLGFIYQFHHLLPDFTALENVAMPLLI 114
Query: 121 HGIQVDDPEEFVIRLLESVGLNEMHLYRYPHEFSGGQRQRIALARLLALKPEFIVLDEPT 180
+ + + +L++VGL+ +R P E SGG+RQR+A+AR L P ++ DEPT
Sbjct: 115 GKKKPAEINSRALEMLKAVGLDHRANHR-PSELSGGERQRVAIARALVNNPRLVLADEPT 173
Query: 181 SALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRI 223
LD +I L EL G +L ++HDL + K MS ++
Sbjct: 174 GNLDARNADSIFQLLGELNRLQGTAFLVVTHDLQLAKRMSRQL 216
>dbj|BAA35937.1| (D90747) Heterocyst maturation protein (devA) homolog [Escherichia
coli]
Length = 263
Score = 103 bits (255), Expect = 3e-21
Identities = 71/223 (31%), Positives = 112/223 (49%), Gaps = 7/223 (3%)
Query: 1 MTETVLKVENLKKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTI 60
M + +L+ +NL K + G +T + VSF + GE +VG SG GK+T +
Sbjct: 31 MNKILLQCDNLCKRYQ-EGSVQT----DVLHNVSFSVGEGEMMAIVGSSGSGKSTLLHLL 85
Query: 61 LRLIEPTDGKIIFMGKDVTKLKGEELKWFRRKAQIMFQDPYSSLDPRQTVFQIIMEPVKF 120
L PT G +IF G+ ++KL K R ++ F + L P T + + P+
Sbjct: 86 GGLDTPTSGDVIFNGQPMSKLSSAA-KAELRNQKLGFIYQFHHLLPDFTALENVAMPLLI 144
Query: 121 HGIQVDDPEEFVIRLLESVGLNEMHLYRYPHEFSGGQRQRIALARLLALKPEFIVLDEPT 180
+ + + +L++VGL+ +R P E SGG+RQR+A+AR L P ++ DEPT
Sbjct: 145 GKKKPAEINSRALEMLKAVGLDHRANHR-PSELSGGERQRVAIARALVNNPRLVLADEPT 203
Query: 181 SALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRI 223
LD +I L EL G +L ++HDL + K MS ++
Sbjct: 204 GNLDARNADSIFQLLGELNRLQGTAFLVVTHDLQLAKRMSRQL 246
>pir||S75960 nitrate transport protein D-1 - Synechocystis sp. (strain PCC 6803)
>gi|1001320|dbj|BAA10807.1| (D64006) nitrate transport
protein NrtD [Synechocystis sp.]
Length = 282
Score = 103 bits (254), Expect = 3e-21
Identities = 72/258 (27%), Positives = 120/258 (45%), Gaps = 29/258 (11%)
Query: 2 TETVLKVENLKKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTIL 61
T L +EN+ K +P G ++ V+ + GE ++G SGCGK+T +
Sbjct: 20 TTAFLTIENVSKVYPTAK-----GPYTVLENVNLTVNEGEFICVIGHSGCGKSTLLNMVS 74
Query: 62 RLIEPTDGKIIFMGKDVTKLKGEELKWFRRKAQIMFQDPYSSLDPRQTVFQIIMEPVKFH 121
PTDG + GK +T+ + + F+ A + P T + + V
Sbjct: 75 GFASPTDGSVQVGGKIITEPGPDRMVVFQNYALL----------PWLTALENVYIAVDAV 124
Query: 122 GIQVDDPEEFVIRL--LESVGLNEMHLYRYPHEFSGGQRQRIALARLLALKPEFIVLDEP 179
Q + E+ I L VGL + + + P + SGG +QR+++AR LA++PE ++LDEP
Sbjct: 125 HSQKTEAEKRAIAKDHLAMVGLTDS-MDKKPGQISGGMKQRVSIARALAIRPEVLILDEP 183
Query: 180 TSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVG---- 235
ALD + + L ++ H T L I+HD+ +++DR+ +M G +G
Sbjct: 184 FGALDAITKEELQEELLQIWNDHRCTVLMITHDIDEALFLADRLVMMTNGPHANIGEIMT 243
Query: 236 -------PADRIFENPLH 246
DRI E+P +
Sbjct: 244 IPFSRPRDRDRIMEDPTY 261
>pir||B64458 high-affinity branched-chain amino acid transport ATP-binding
protein homolog - Methanococcus jannaschii
>gi|1591902|gb|AAB99273.1| (U67567) high-affinity
branched-chain amino acid transport ATP-binding protein
(braF) [Methanococcus jannaschii]
Length = 257
Score = 102 bits (252), Expect = 6e-21
Identities = 73/254 (28%), Positives = 123/254 (47%), Gaps = 22/254 (8%)
Query: 2 TETVLKVENLKKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTIL 61
T +L+ EN+ KYF G KA+DGVS + +G+ ++G +G GK+T I
Sbjct: 4 TMEILRTENIVKYF---------GEFKALDGVSISVNKGDVTLIIGPNGSGKSTLINVIT 54
Query: 62 RLIEPTDGKIIFMGKDVTKLKGEELKWFRRKAQIMFQDPYSSLDPRQTVFQIIMEPVK-- 119
++ +G++ F KD+T + EL + P + + + + P +
Sbjct: 55 GFLKADEGRVYFENKDITNKEPAELYHYGIVRTFQTPQPLKEMTVLENLLIGEINPGESP 114
Query: 120 ----FHGIQVDDPEEFV---IRLLESVGLNEMHLY-RYPHEFSGGQRQRIALARLLALKP 171
F+ + EE V ++LE + L+ HLY R E SGGQ + + + R L P
Sbjct: 115 LNSLFYKKWIPKEEEMVEKAFKILEFLKLS--HLYDRKAGELSGGQMKLVEIGRALMTNP 172
Query: 172 EFIVLDEPTSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKL 231
+ IV+DEP + + + +I N + EL+ K G T+L I H L +V D + VM+ G++
Sbjct: 173 KMIVMDEPIAGVAPGLAHDIFNHVLELKAK-GITFLIIEHRLDIVLNYIDHLYVMFNGQI 231
Query: 232 VEVGPADRIFENPL 245
+ G + +N L
Sbjct: 232 IAEGRGEEEIKNVL 245
>sp|P46342|YQGK_BACSU HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PROTEIN YQGK
>gi|7442552|pir||E69956 phosphate ABC transporter
(ATP-binding pro) homolog yqgK - Bacillus subtilis
>gi|903307|dbj|BAA09585.1| (D58414) ORF75 [Bacillus
subtilis] >gi|1303858|dbj|BAA12514.1| (D84432) YqgK
[Bacillus subtilis] >gi|2634928|emb|CAB14425.1| (Z99116)
alternate gene name: yzmF~similar to phosphate ABC
transporter (ATP-binding protein) [Bacillus subtilis]
Length = 260
Score = 102 bits (251), Expect = 8e-21
Identities = 73/254 (28%), Positives = 132/254 (51%), Gaps = 23/254 (9%)
Query: 2 TETVLKVENLKKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTIL 61
TE V+K E + + G+ G A+ ++ I E ++G SGCGK+T +T+
Sbjct: 5 TEAVMKQE----VYQVNGMNLWYGQHHALKNINLSIYENEVTAIIGPSGCGKSTFIKTLN 60
Query: 62 RLIEPTD-----GKIIFMGKDVTKLKGEELKWFRRKAQIMFQ--DPYSSLDPRQTVFQII 114
+I+ T G++ + G ++ K K + + R+ ++FQ +P+ Q++F +
Sbjct: 61 LMIQMTPNVKLAGELNYNGSNILKDKVDIVD-LRKNIGMVFQKGNPFP-----QSIFDNV 114
Query: 115 MEPVKFHGIQVDDP-EEFVIRLLESVGLNEM---HLYRYPHEFSGGQRQRIALARLLALK 170
+ HG + +E V + L+ V L + L+ SGGQ+QR+ +AR LA
Sbjct: 115 AYGPRVHGTKNKKKLQEIVEKSLKDVALWDEVKDRLHTSALSLSGGQQQRLCIARALATN 174
Query: 171 PEFIVLDEPTSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGK 230
P+ +++DEPTSALD I + EL++K +T + ++H++ +SD+ Y+G+
Sbjct: 175 PDILLMDEPTSALDPISTRKIEELILELKDK--YTIVIVTHNMQQAARVSDQTAFFYMGE 232
Query: 231 LVEVGPADRIFENP 244
LVE +++F NP
Sbjct: 233 LVECDNTNKMFSNP 246
>gb|AAC24216.1| (AF055482) ABC transporter [Thermotoga neapolitana]
Length = 138
Score = 101 bits (249), Expect = 1e-20
Identities = 53/143 (37%), Positives = 84/143 (58%), Gaps = 6/143 (4%)
Query: 183 LDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVGPADRIFE 242
+D S++ +I+N +L+++ G + ++I+HDL Y+SDRI +M+ G +VE+G +R+
Sbjct: 2 VDASLRMSIVNLFAQLRDQLGVSVIYITHDLATAYYVSDRIAIMFRGDIVEMGSVERVLT 61
Query: 243 NPLHPYTQMLFSAIPIPDPDLAREMKKKRMKVTGEPPSPINPPKGCRFHPRCPYAKAGLC 302
+P HPYT++L +IP PDP E K K + KGC+F RCP + +C
Sbjct: 62 DPKHPYTRLLRESIPEPDP----EKKWKEEITIADTEYEEYLRKGCKFAGRCPEVMS-IC 116
Query: 303 DKEEPPMVEVEKDHYVACWLYAK 325
+E+PP + V D V C LY K
Sbjct: 117 REEKPPEIMV-GDSMVRCHLYKK 138
>dbj|BAB03992.1| (AP001507) ABC transporter (ATP-binding protein) [Bacillus
halodurans]
Length = 253
Score = 101 bits (248), Expect = 2e-20
Identities = 70/234 (29%), Positives = 122/234 (51%), Gaps = 15/234 (6%)
Query: 1 MTETVLKVENLKKYFPIRGLFRTIGWV--KAVDGVSFEIKRGETFGLVGESGCGKTTTGR 58
M++ +L V+ L K + +G V KA+ G+ F++KR E ++G SG GKTT
Sbjct: 1 MSDIILNVQQLHKDY--------VGEVNYKALKGIDFQLKRNEFVSVMGPSGSGKTTFLN 52
Query: 59 TILRLIEPTDGKIIFMGKDVTKLKGEELKWFRR-KAQIMFQDPYSSLDPRQTVFQIIMEP 117
I + PT+G I K+ +L E+L FRR + +FQD +L TV + I+ P
Sbjct: 53 CISTIDRPTNGSITINQKNPYELNDEDLAKFRRSELGFVFQD--FNLVHTLTVEENILLP 110
Query: 118 VKFHGIQVDDPEEFVIRLLESVGLNEMHLYRYPHEFSGGQRQRIALARLLALKPEFIVLD 177
+ + + + ++E +G+ E+ + + E SGGQ+QR+A+AR + +P ++ D
Sbjct: 111 LTLDAVNAKEMTSRLAEVVEFLGIEEI-MKKRTFEISGGQKQRVAIARAVIHQPSLLLAD 169
Query: 178 EPTSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKL 231
EPT LD +++ + + E + L ++HD V + ++R+ M G L
Sbjct: 170 EPTGNLDSKAANSVMTLFQSIHETFQTSLLMVTHDPYVASF-AERVIFMQDGML 222
>gb|AAK40988.1| ABC transporter, ATP binding protein. [Sulfolobus solfataricus]
Length = 246
Score = 100 bits (246), Expect = 3e-20
Identities = 74/224 (33%), Positives = 118/224 (52%), Gaps = 9/224 (4%)
Query: 1 MTETVLKVENLKKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTI 60
MT+ ++ +LKK + + + A+ GV+ ++ +GE + G SG GKTT +
Sbjct: 15 MTDILIDAMDLKKVYKTKNIEYV-----ALRGVTLKVNKGEFLVIAGPSGSGKTTLLDLL 69
Query: 61 LRLIEPTDGKIIFMGKDVTKLKGEELKWFRRKAQIMFQDPYSSLDPRQTVFQIIMEPVKF 120
L P+ GKII G DVT +E FRR+ I F +L TV + + +
Sbjct: 70 GLLDSPSAGKIIIDGIDVTNFDEDERAIFRRR-YIGFVFQSYNLITYLTVLENVELALAA 128
Query: 121 HGIQVDDPEEFVIRLLESV-GLNEMHLYRYPHEFSGGQRQRIALARLLALKPEFIVLDEP 179
GI V E +L + G+ E+ + P+E SGGQ+QR+A+AR LA P+ ++ DEP
Sbjct: 129 IGIPVWKRREKAEEILSMIPGMLELK-NKKPNELSGGQQQRVAIARALANDPKILLADEP 187
Query: 180 TSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRI 223
T+ LD I+ +K+L E+ T + +HD +++Y +DRI
Sbjct: 188 TANLDSKTGEAIVELMKKLNEEKKVTIIMATHDPDMMRY-ADRI 230
>emb|CAB57615.1| (Y18930) ABC transporter/ATP-binding protein [Sulfolobus
solfataricus]
Length = 246
Score = 100 bits (246), Expect = 3e-20
Identities = 74/224 (33%), Positives = 118/224 (52%), Gaps = 9/224 (4%)
Query: 1 MTETVLKVENLKKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTI 60
MT+ ++ +LKK + + + A+ GV+ ++ +GE + G SG GKTT +
Sbjct: 15 MTDILIDAMDLKKVYKTKNIEYV-----ALRGVTLKVNKGEFLVIAGPSGSGKTTLLDLL 69
Query: 61 LRLIEPTDGKIIFMGKDVTKLKGEELKWFRRKAQIMFQDPYSSLDPRQTVFQIIMEPVKF 120
L P+ GKII G DVT +E FRR+ I F +L TV + + +
Sbjct: 70 GLLDSPSAGKIIIDGIDVTNFDEDERAIFRRR-YIGFVFQSYNLITYLTVLENVELALAA 128
Query: 121 HGIQVDDPEEFVIRLLESV-GLNEMHLYRYPHEFSGGQRQRIALARLLALKPEFIVLDEP 179
GI V E +L + G+ E+ + P+E SGGQ+QR+A+AR LA P+ ++ DEP
Sbjct: 129 IGIPVWKRREKAEEILSMIPGMLELK-NKKPNELSGGQQQRVAIARALANDPKILLADEP 187
Query: 180 TSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRI 223
T+ LD I+ +K+L E+ T + +HD +++Y +DRI
Sbjct: 188 TANLDSKTGEAIVELMKKLNEEKKVTIIMATHDPDMMRY-ADRI 230
>dbj|BAB07698.1| (AP001520) ABC transporter (ATP-binding protein) [Bacillus
halodurans]
Length = 257
Score = 99.8 bits (245), Expect = 4e-20
Identities = 70/235 (29%), Positives = 115/235 (48%), Gaps = 19/235 (8%)
Query: 1 MTETVLKVENLKKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTI 60
M+ T + V+ LKK F + + + GV F ++RGE F L+G +G GKTTT +
Sbjct: 1 MSHTAISVKRLKKSFKNKDVLK---------GVDFAVQRGEIFALLGSNGAGKTTTVNIL 51
Query: 61 LRLIEPTDGKIIFMGKDVTKLKGEELKWFRRKAQIMFQDPYSSLDPRQTVFQIIMEPVKF 120
L++P +G+ G DV + + I +++LD T + +M K
Sbjct: 52 STLLKPDEGEASICGFDVQRQPDHV------RQSISLTGQFAALDGMLTGRENLMIIAKL 105
Query: 121 HGIQVDDPEEFVIRLLESVGLNEMHLYRYPHEFSGGQRQRIALARLLALKPEFIVLDEPT 180
G V +P + LL L + R ++SGG ++R+ +A L KP I LDEPT
Sbjct: 106 RG--VPNPSQVADHLLARFSLTDA-ANRRADQYSGGMKRRLDIAMSLIGKPAVIFLDEPT 162
Query: 181 SALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVG 235
+ LD + + + +KEL G T L + L + ++DRI +++ GK++ G
Sbjct: 163 TGLDPEGRIEVWDAVKEL-AGGGTTILLTTQYLEEAEQLADRIAILHDGKIITTG 216
>gb|AAK42315.1| ABC transporter, ATP binding protein. [Sulfolobus solfataricus]
Length = 339
Score = 99.5 bits (244), Expect = 5e-20
Identities = 72/242 (29%), Positives = 115/242 (46%), Gaps = 16/242 (6%)
Query: 1 MTETVLKVENLKKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTI 60
M +K NL K F G AVD ++FE+ GE FG +G +G GK+TT + +
Sbjct: 7 MRNVAIKAINLTKRF---------GKFVAVDHINFEVYEGEIFGFLGPNGAGKSTTIKML 57
Query: 61 LRLIEPTDGKIIFMGKDVTKLKGEELKWFRRKAQIMFQDPYSSLDPRQTVFQIIMEPVKF 120
+++P++G G DV K + R+ ++ Q+ + D T ++ +M
Sbjct: 58 TTVLKPSEGTATVSGYDVIK----QPALVRQSIGVVPQE--YTADEDLTGWENMMMMAGL 111
Query: 121 HGIQVDDPEEFVIRLLESVGLNEMHLYRYPHEFSGGQRQRIALARLLALKPEFIVLDEPT 180
+GI EE LLE V L R +SGG R+R+ +A L +P + LDEPT
Sbjct: 112 YGIPKRIAEERAKELLEMVELTYA-AKRKVETYSGGMRRRLEIAMSLISRPRILFLDEPT 170
Query: 181 SALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVGPADRI 240
LD +A I + +L+E++ T +H L DRI ++ GK++ +G +
Sbjct: 171 LGLDAQTRAAIWQYIMKLKEEYKMTIFVTTHYLEEADMYGDRIAIIDKGKILAIGSPKEL 230
Query: 241 FE 242
E
Sbjct: 231 KE 232
>pir||S74048 probable daunorubicin resistance protein - Sulfolobus solfataricus
>gi|1707742|emb|CAA69462.1| (Y08256) daunorubicin
resistance ATP-binding protein DrrA [Sulfolobus
solfataricus]
Length = 339
Score = 99.5 bits (244), Expect = 5e-20
Identities = 72/242 (29%), Positives = 115/242 (46%), Gaps = 16/242 (6%)
Query: 1 MTETVLKVENLKKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTI 60
M +K NL K F G AVD ++FE+ GE FG +G +G GK+TT + +
Sbjct: 7 MRNVAIKAINLTKRF---------GKFVAVDHINFEVYEGEIFGFLGPNGAGKSTTIKML 57
Query: 61 LRLIEPTDGKIIFMGKDVTKLKGEELKWFRRKAQIMFQDPYSSLDPRQTVFQIIMEPVKF 120
+++P++G G DV K + R+ ++ Q+ + D T ++ +M
Sbjct: 58 TTVLKPSEGTATVSGYDVIK----QPALVRQSIGVVPQE--YTADEDLTGWENMMMMAGL 111
Query: 121 HGIQVDDPEEFVIRLLESVGLNEMHLYRYPHEFSGGQRQRIALARLLALKPEFIVLDEPT 180
+GI EE LLE V L R +SGG R+R+ +A L +P + LDEPT
Sbjct: 112 YGIPKRIAEERAKELLEMVELTYA-AKRKVETYSGGMRRRLEIAMSLISRPRILFLDEPT 170
Query: 181 SALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVGPADRI 240
LD +A I + +L+E++ T +H L DRI ++ GK++ +G +
Sbjct: 171 LGLDAQTRAAIWQYIMKLKEEYKMTIFVTTHYLEEADMYGDRIAIIDKGKILAIGSPKEL 230
Query: 241 FE 242
E
Sbjct: 231 KE 232
>gb|AAK40417.1| ABC transporter, ATP binding protein [Sulfolobus solfataricus]
Length = 246
Score = 99.1 bits (243), Expect = 7e-20
Identities = 75/241 (31%), Positives = 122/241 (50%), Gaps = 23/241 (9%)
Query: 1 MTETVLKVENLKKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTI 60
MT +++V++L K + + + R G+SF + +GE F L+G +G GKTTT + +
Sbjct: 1 MTNVIVEVKDLYKEYKDKEVLR---------GISFTVYKGEIFSLLGPNGAGKTTTVKIL 51
Query: 61 LRLIEPTDGKIIFMGKDVTKLKGEELKWFRRKAQIMFQDPYSSLDPRQTVFQIIMEPVKF 120
+++PT G++ +G V G+ R + +M QD LD TV + I VK
Sbjct: 52 SCVLKPTRGEVKVIGYKVPNECGK----IRERIGVMPQDYQGFLD--LTVRENIEYFVKL 105
Query: 121 HGIQVDDPEEFVIRL-LESVGLNEMHLYRYPHEFSGGQRQRIALARLLALKPEFIVLDEP 179
+ + +E + L LE V ++ RY SGG +R+ +A A E + LDEP
Sbjct: 106 YNGKETQVDELISLLDLEKVKNQKL---RY---LSGGYVRRVGIASAFAGSQEILFLDEP 159
Query: 180 TSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVGPADR 239
T LD + +K ++ K G T +H L + +SDR+ ++Y GKL++V AD
Sbjct: 160 TVGLDPKARRGFWEIIKMMKNK-GVTIFLTTHYLDEAQKLSDRVAILYGGKLIKVSTADE 218
Query: 240 I 240
I
Sbjct: 219 I 219
>pir||S75436 hypothetical protein c05019 - Sulfolobus solfataricus
>gi|1707842|emb|CAA69520.1| (Y08257) putative ABC
transporter [Sulfolobus solfataricus]
Length = 246
Score = 99.1 bits (243), Expect = 7e-20
Identities = 75/241 (31%), Positives = 122/241 (50%), Gaps = 23/241 (9%)
Query: 1 MTETVLKVENLKKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTI 60
MT +++V++L K + + + R G+SF + +GE F L+G +G GKTTT + +
Sbjct: 1 MTNVIVEVKDLYKEYKDKEVLR---------GISFTVYKGEIFSLLGPNGAGKTTTVKIL 51
Query: 61 LRLIEPTDGKIIFMGKDVTKLKGEELKWFRRKAQIMFQDPYSSLDPRQTVFQIIMEPVKF 120
+++PT G++ +G V G+ R + +M QD LD TV + I VK
Sbjct: 52 SCVLKPTRGEVKVIGYKVPNECGK----IRERIGVMPQDYQGFLD--LTVRENIEYFVKL 105
Query: 121 HGIQVDDPEEFVIRL-LESVGLNEMHLYRYPHEFSGGQRQRIALARLLALKPEFIVLDEP 179
+ + +E + L LE V ++ RY SGG +R+ +A A E + LDEP
Sbjct: 106 YNGKETQVDELISLLDLEKVKNQKL---RY---LSGGYVRRVGIASAFAGSQEILFLDEP 159
Query: 180 TSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVGPADR 239
T LD + +K ++ K G T +H L + +SDR+ ++Y GKL++V AD
Sbjct: 160 TVGLDPKARRGFWEIIKMMKNK-GVTIFLTTHYLDEAQKLSDRVAILYGGKLIKVSTADE 218
Query: 240 I 240
I
Sbjct: 219 I 219
>pir||C72568 probable ATP-binding transport protein APE1829 - Aeropyrum pernix
(strain K1) >gi|5105519|dbj|BAA80832.1| (AP000062) 345aa
long hypothetical ATP-binding transport protein
[Aeropyrum pernix]
Length = 345
Score = 98.3 bits (241), Expect = 1e-19
Identities = 70/244 (28%), Positives = 122/244 (49%), Gaps = 15/244 (6%)
Query: 1 MTETVLKVENLKKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTI 60
M +++ L K F + R + V+A+ GVSF + GE + +G +G GKTTT R +
Sbjct: 1 MAGAMIEARGLVKRFVSGRIRRRV--VEALKGVSFSVYEGEIYSFLGPNGAGKTTTVRIL 58
Query: 61 LRLIEPTDGKIIFMGKDVTKLKGEELKWFRRKAQIMF---QDPYSSLDPRQTVFQIIMEP 117
L++P G+ G DV K + E R++ +M + Y L R+ ++
Sbjct: 59 STLLDPDGGEARVAGFDVVKERWE----VRKRIGVMLSVERGFYWKLTGRENLYYF---- 110
Query: 118 VKFHGIQVDDPEEFVIRLLESVGLNEMHLYRYP-HEFSGGQRQRIALARLLALKPEFIVL 176
+ +GI + + + +L+ VGL ++ P E S G + R+ LAR+L PE ++L
Sbjct: 111 GRIYGIPQGELKSRIKEVLDLVGLTDLGGADKPFEEMSLGMKARLGLARVLLKDPEVLIL 170
Query: 177 DEPTSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVGP 236
DEPT LD + I ++ L + G T +H++ + +SDR+G++ G++ G
Sbjct: 171 DEPTLGLDPASARTIRGVIRSLASE-GRTIFITTHNMVEAEMISDRVGIIIGGRIAMEGT 229
Query: 237 ADRI 240
D +
Sbjct: 230 PDEL 233
>sp|Q58418|PSTB_METJA PROBABLE PHOSPHATE TRANSPORT ATP-BINDING PROTEIN PSTB
>gi|2119775|pir||C64426 phosphate transport system
ATP-binding protein - Methanococcus jannaschii
>gi|1591672|gb|AAB99016.1| (U67544) phosphate specific
transport complex component (pstB) [Methanococcus
jannaschii]
Length = 252
Score = 97.1 bits (238), Expect = 3e-19
Identities = 68/253 (26%), Positives = 129/253 (50%), Gaps = 24/253 (9%)
Query: 1 MTETVLKVENLKKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTI 60
MT+ ++ +NL ++ G +A+ ++ I + L+G SGCGK+T R +
Sbjct: 1 MTKVKMETKNLNLWY---------GEKQALFDINLPIYENKITALIGPSGCGKSTFLRCL 51
Query: 61 LRLIE-----PTDGKIIFMGKDVTKLKGEELKWFRRKAQIMFQDPYSSLDPRQTVFQIIM 115
RL + +G+++ GK++ K ++ R++ ++FQ P +++ +
Sbjct: 52 NRLNDLIPNVRIEGEVLLDGKNIYD-KDVDVYELRKRVGMVFQKPNPFA---MSIYDNVA 107
Query: 116 EPVKFHGI----QVDDPEEFVIRLLESVGLNEMHLYRYPHEFSGGQRQRIALARLLALKP 171
+ HGI ++D E+ ++ + L++ SGGQ+QR+ +AR +A+KP
Sbjct: 108 FGPRIHGIKDKKELDKIVEWALKKAALWDEVKDELHKNALSLSGGQQQRLCIARAIAVKP 167
Query: 172 EFIVLDEPTSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKL 231
E +++DEPTSALD I + EL + +T + ++H++ +SD +GKL
Sbjct: 168 EVLLMDEPTSALDPISTLKIEELMVELAK--DYTIVVVTHNMQQASRVSDYTAFFLMGKL 225
Query: 232 VEVGPADRIFENP 244
+E G ++IF NP
Sbjct: 226 IEFGETEQIFLNP 238
>pir||A70158 ABC transporter, ATP-binding protein homolog - Lyme disease
spirochete >gi|2688376|gb|AAC66828.1| (AE001151) ABC
transporter, ATP-binding protein [Borrelia burgdorferi]
Length = 277
Score = 96.7 bits (237), Expect = 3e-19
Identities = 71/245 (28%), Positives = 127/245 (50%), Gaps = 18/245 (7%)
Query: 1 MTETVLKVENL-KKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRT 59
+ VLK +N+ KKY G AV+G++ I +GE GL+G +G GKTTT T
Sbjct: 35 VNNVVLKADNIIKKY----------GEKLAVNGITINIYKGEVVGLLGPNGAGKTTTFYT 84
Query: 60 ILRLIEPTDGKIIFMGKDVTKLKGEELKWFRRKAQIMFQDPYSSLDPRQTVFQIIMEPV- 118
I+ I+P GK++ +++ L E R + I++ +S+ TV + IM +
Sbjct: 85 IVGFIKPNAGKVLINDYNISSLNMYE----RARIGIVYLPQDASIFRELTVEENIMVALE 140
Query: 119 KFHGIQVDDPEEFVIRLLESVGLNEMHLYRYPHEFSGGQRQRIALARLLALKPEFIVLDE 178
+ + + + ++ LL+ + + + + SGG+R+R +AR LA+ P F++LDE
Sbjct: 141 RREDLSKAERKIELVNLLKEFEIKRIQSQK-AYTLSGGERRRAEIARALAVNPYFLLLDE 199
Query: 179 PTSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVGPAD 238
P + +D +I N +K L+EK+ L H++ + DR ++Y G++++ G D
Sbjct: 200 PFAGIDPIAIGDIKNIIKILKEKN-IGVLITDHNVRDAFDIIDRAYIVYQGQVLDEGDVD 258
Query: 239 RIFEN 243
I +
Sbjct: 259 YIISS 263
>pir||F72485 probable high-affinity branched-chain amino acid transport
ATP-binding protein APE2526 - Aeropyrum pernix (strain
K1) >gi|5106231|dbj|BAA81542.1| (AP000064) 240aa long
hypothetical high-affinity branched-chain amino acid
transport ATP-binding protein [Aeropyrum pernix]
Length = 240
Score = 96.7 bits (237), Expect = 3e-19
Identities = 70/247 (28%), Positives = 124/247 (49%), Gaps = 20/247 (8%)
Query: 1 MTETVLKVENLKKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTI 60
M E +L+V+++ Y+ G +A+ GVS + +GE L+G +G GKTTT TI
Sbjct: 2 MAEPLLEVKSIDVYY---------GEFQALFGVSLRVYKGEIVALLGGNGAGKTTTLLTI 52
Query: 61 LRLIEPTDGKIIFMGKDVTKLKGEELKWFRRKAQIMFQDPYS-SLDPRQTVFQIIMEPVK 119
L++P +G II+ G+D+T L F+R + + P + PR TV++ +
Sbjct: 53 SGLLKPRNGSIIWQGRDITGLPA-----FKRVEEGISHVPEGRGIFPRLTVYENLRVAAS 107
Query: 120 FHGIQ--VDDPEEFVIRLLESVGLNEMHLYRYPHEFSGGQRQRIALARLLALKPEFIVLD 177
+ D E V + + L SGG++Q +A+AR L +P +++D
Sbjct: 108 TRRAKEHFQDSLEQVYTIFPILKARRSQL---AGTLSGGEQQMLAIARALIQRPILLMMD 164
Query: 178 EPTSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVGPA 237
EP+ L + +++ L+E+ G T L + ++G+ ++DR VM G++V G +
Sbjct: 165 EPSLGLAPKLARDVIYLASRLREELGVTILLVEQNVGLSLKVADRGYVMETGRIVLEGAS 224
Query: 238 DRIFENP 244
D + +P
Sbjct: 225 DELALDP 231
>pir||D81263 probable ABC transport system ATP-binding protein Cj1663 [imported]
- Campylobacter jejuni (strain NCTC 11168)
>gi|6969079|emb|CAB73650.1| (AL139079) putative ABC
transport system ATP-binding protein [Campylobacter
jejuni]
Length = 217
Score = 95.6 bits (234), Expect = 7e-19
Identities = 71/232 (30%), Positives = 123/232 (52%), Gaps = 18/232 (7%)
Query: 1 MTETVLKVENLKKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTI 60
M + ++K+ NL K F G VKA++ ++ + GE ++G SG GK+T +
Sbjct: 2 MKKELIKINNLNKEF---------GKVKALNNINLSVYEGEWLAIMGPSGSGKSTLLNIL 52
Query: 61 LRLIEPTDGKIIFMGKDVTKLKGEELKWFRR-KAQIMFQDPYSSLDPRQTVFQIIMEPVK 119
+ P+ G+ I +++ ++ E+ RR K ++FQ + L P + +M
Sbjct: 53 SLMDTPSSGEYILDNENLEQMDEEQKITLRREKIGLVFQQFH--LIPYLNALENVMLSQY 110
Query: 120 FHGIQVDDPEEFVIRLLESVGLNEMHLYRYPHEFSGGQRQRIALARLLALKPEFIVLDEP 179
+H VD EE +LE VGL+ L P + SGG++QR+ +AR L PE ++ DEP
Sbjct: 111 YHS-SVD--EEDAKMVLEKVGLSH-RLTHLPSQLSGGEQQRVCIARALINNPELLLADEP 166
Query: 180 TSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKL 231
T LD + + +L TL++L+ + G T + I+H+ + K+ +DR ++ G L
Sbjct: 167 TGNLDEANEQIVLQTLQKLKNE-GKTIVLITHNPDLAKF-ADRTLILQHGVL 216
>pir||S74384 high-affinity branched-chain amino acid transport ATP-binding
protein braF - Synechocystis sp. (strain PCC 6803)
>gi|1001160|dbj|BAA10302.1| (D64001) high-affinity
branched-chain amino acid transport ATP-binding protein
[Synechocystis sp.]
Length = 267
Score = 94.4 bits (231), Expect = 2e-18
Identities = 67/259 (25%), Positives = 118/259 (44%), Gaps = 17/259 (6%)
Query: 1 MTETVLKVENL----KKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTT 56
M++ + ENL +GL ++ G ++AVD +K G GL+G +G GKTT
Sbjct: 1 MSDRITPAENLGSPESSLLLAQGLSKSFGGLRAVDHADIVVKEGSITGLIGPNGAGKTTL 60
Query: 57 GRTILRLIEPTDGKIIFMGKDVTKLKGEELKWFRRKAQIMFQDPYSSL---------DPR 107
+ I P G+++F G + +L ++ S L D
Sbjct: 61 FNLLSNFIRPDQGEVLFNGDSIGQLAPHQIALRGSVRTFQVAKVLSRLTVLENMLLADQH 120
Query: 108 QTVFQIIMEPVKFHGIQVDD--PEEFVIRLLESVGLNEMHLYRYPHEFSGGQRQRIALAR 165
QT + + + F +Q ++ E + +LESVGL Y SGGQR+ + +AR
Sbjct: 121 QTGEKFLPRLINFRRVQKEERANREKAMAMLESVGLG-AKAQDYAGALSGGQRKLLEMAR 179
Query: 166 LLALKPEFIVLDEPTSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGV 225
L P+ I+LDEP + ++ ++ I + + G T+L I H++ V+ + + V
Sbjct: 180 ALMSNPKLILLDEPAAGVNPTLIGQICEHIVN-WNRQGITFLVIEHNMDVIMTLCHHVWV 238
Query: 226 MYLGKLVEVGPADRIFENP 244
+ G+ + G ++I +P
Sbjct: 239 LAEGRNLADGTPEQIQSDP 257
>gb|AAG34709.1|AF320001_2 (AF320001) putative ATP binding protein of ABC transporter
[Acinetobacter sp. BD413]
Length = 228
Score = 93.6 bits (229), Expect = 3e-18
Identities = 65/215 (30%), Positives = 108/215 (50%), Gaps = 12/215 (5%)
Query: 1 MTETVLKVENLKKYFPIRGLFRTIG--WVKAVDGVSFEIKRGETFGLVGESGCGKTTTGR 58
M++ VL+ +++ K+F T G V+ + G+S +I GE +VG SG GK+T
Sbjct: 1 MSKIVLEAKDVYKHF-------TDGKSTVEVIKGLSLKIAAGEFVSIVGASGSGKSTLLH 53
Query: 59 TILRLIEPTDGKIIFMGKDVTKLKGEELKWFRRKAQIMFQDPYSSLDPRQTVFQIIMEPV 118
+ L +PT G++ F+ + GE + F+R + F + L P + + + P+
Sbjct: 54 ILGGLDQPTQGQV-FLNEQRFDNLGEAERGFKRNQYLGFVYQFHHLLPEFSALENVAMPL 112
Query: 119 KFHG-IQVDDPEEFVIRLLESVGLNEMHLYRYPHEFSGGQRQRIALARLLALKPEFIVLD 177
+ ++ LL+ VGL+ L P E SGG+RQR+ALAR L +P ++ D
Sbjct: 113 MLRADTNYKEVKQQAEHLLDRVGLSH-RLTHKPGELSGGERQRVALARALVARPAVMLAD 171
Query: 178 EPTSALDVSVQANILNTLKELQEKHGFTYLFISHD 212
EPT LD I L +L+++ L ++HD
Sbjct: 172 EPTGNLDRKTAFGIFELLSDLKQEFNMAMLIVTHD 206
>gb|AAC67220.1| (U78968) ATPase protein DppD [Streptococcus pyogenes]
Length = 267
Score = 93.2 bits (228), Expect = 4e-18
Identities = 62/240 (25%), Positives = 108/240 (44%), Gaps = 13/240 (5%)
Query: 1 MTETVLKVENLKKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTI 60
MTET+L +++L F G F + ++ E+K+GE ++G SG GK+ I
Sbjct: 1 MTETLLSIKDLSITFTQYGRFLKPFQSTPIQALNLEVKKGELLAIIGASGSGKSLLAHAI 60
Query: 61 LRLI---EPTDGKIIFMGKDVTKLKGEELKWFRRKAQIMFQDPYSSLDPRQTVFQIIMEP 117
+ ++ G +I+ G+ +T + +K R K + + LDP V +
Sbjct: 61 MDILPKNAAVTGDMIYRGQSLT---SKRIKQLRGKEMTLIPQSVNYLDPSMKVKHQVRLG 117
Query: 118 VKFHGIQVDDPEEFVIRLLESVGLNEMHLYRYPHEFSGGQRQRIALARLLALKPEFIVLD 177
+ + + L + GL E YP + SGG +R+ ++ I+ D
Sbjct: 118 ISENAKATQE------GLFQQFGLKESDGDLYPFQLSGGMLRRVLFTTCVSDTVSLIIAD 171
Query: 178 EPTSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVGPA 237
EPT L +L+ L+ +K G + +FI+HD+ ++DRI + GK +E PA
Sbjct: 172 EPTPGLHPDALQMVLDQLRSFADK-GISVIFITHDIVAASQIADRITIFKEGKAIETAPA 230
>gb|AAG32538.1| (AY005472) SalT [Streptococcus salivarius]
Length = 722
Score = 92.8 bits (227), Expect = 5e-18
Identities = 69/246 (28%), Positives = 124/246 (50%), Gaps = 22/246 (8%)
Query: 2 TETVLKVENLKKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTIL 61
T+ + ++N+ + + G K ++G++ ++ GE ++G+SG GKTT + +L
Sbjct: 474 TDIEINLKNINYQYELNG-------AKVLNGINLKVHSGEFVAIIGKSGSGKTTLAKMLL 526
Query: 62 RLIEPTDGKIIFMGKDVTKLKGEELKWFRRKAQIMFQDPYSSLDPRQTVFQIIMEPVKFH 121
+ P+ G I + +K+ + K FR + + QD S + ++ I +
Sbjct: 527 GYVSPSSGDITYNNISYSKI---DKKDFRNISAFVSQD--SPMFDGDVMYNISLGRESVS 581
Query: 122 GIQVDDPEEFVIRLLESVGLNEMH----LYRYPHEFSGGQRQRIALARLLALKPEFIVLD 177
G QV + + V + + + M L+R SGGQ+QRI+LAR L P +VLD
Sbjct: 582 GEQVIETCKRV-SIYDDIRSMPMKFHTLLFRDNPSISGGQKQRISLARELVTTPRILVLD 640
Query: 178 EPTSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVGPA 237
EPTSALDV + I ++ L T + ++H L V+ +D+I +M GK+++ G
Sbjct: 641 EPTSALDVKTERIIQKNVEALH----CTRVLVTHRLNTVE-KADKILIMDNGKIIDYGNH 695
Query: 238 DRIFEN 243
+++N
Sbjct: 696 YYLYKN 701
>gb|AAD45713.1|AF160811_1 (AF160811) L-arabinose transport, ATP binding protein [Bacillus
stearothermophilus]
Length = 513
Score = 92.4 bits (226), Expect = 6e-18
Identities = 77/245 (31%), Positives = 127/245 (51%), Gaps = 34/245 (13%)
Query: 1 MTETVLKVENLKKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTI 60
M+E +L++ + K FP VKA+D V+F+++ GE L GE+G GK+T + +
Sbjct: 1 MSEFILEMRGITKQFP---------GVKALDNVNFKVREGEIHALCGENGAGKSTLMK-V 50
Query: 61 LRLIEP---TDGKIIFMGKDVTKLKGEELKWFRRKAQIMFQD-----PYSSLDPRQTVFQ 112
L + P DG+I+F G +V K K +K + ++ PY S+ + +F
Sbjct: 51 LSGVYPYGTYDGEIVFKG-EVCKFK--NIKQSEQLGIVIIHQELALIPYLSI--AENIF- 104
Query: 113 IIMEPVKFHGIQVDDPEEFVIRLLESVGLNEMHLYRYPHEFSG----GQRQRIALARLLA 168
+ E K I ++ +LL+ VGL E PH G G++Q + +A+ LA
Sbjct: 105 LGNERAKKGIINWNETIAQTKKLLQKVGLEES-----PHTLVGQLGVGKQQLVEIAKALA 159
Query: 169 LKPEFIVLDEPTSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYL 228
+ ++LDEPT+AL+ N+LN L EL +K G + + ISH L + ++D I ++
Sbjct: 160 KDVKLLILDEPTAALNEDDSENLLNLLLEL-KKQGLSAIIISHKLNEITKVADSITILRD 218
Query: 229 GKLVE 233
GK +E
Sbjct: 219 GKTIE 223
>pir||E83288 probable ATP-binding component of ABC transporter PA2857 [imported]
- Pseudomonas aeruginosa (strain PAO1)
>gi|9948945|gb|AAG06245.1|AE004712_5 (AE004712) probable
ATP-binding component of ABC transporter [Pseudomonas
aeruginosa]
Length = 227
Score = 92.1 bits (225), Expect = 8e-18
Identities = 63/212 (29%), Positives = 106/212 (49%), Gaps = 9/212 (4%)
Query: 1 MTETVLKVENLKKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTI 60
M+ ++L +NL K + G + + +S ++ RG++ +VG SG GK+T +
Sbjct: 1 MSASILNAQNLSKV-----VGSAEGKLTILHDLSLDLARGDSLAIVGSSGSGKSTLLGLL 55
Query: 61 LRLIEPTDGKIIFMGKDVTKLKGEELKWFRRKAQIMFQDPYSSLDPRQTVFQIIMEPVKF 120
L +P+ G++ G + L E+ + R A + F L + +M P++
Sbjct: 56 AGLDQPSGGEVRLAGHALGDLD-EDQRARVRAAHVGFVFQSFQLLDSLDALENVMLPLEL 114
Query: 121 HGIQVDDPEEFVIRLLESVGLNEMHLYRYPHEFSGGQRQRIALARLLALKPEFIVLDEPT 180
G D + LLE VGL + L YP + SGG++QR+A+AR A +P+ + DEPT
Sbjct: 115 EGRA--DARQRARELLERVGLGQ-RLGHYPRQLSGGEQQRVAIARAFAAEPDVLFADEPT 171
Query: 181 SALDVSVQANILNTLKELQEKHGFTYLFISHD 212
LD + I + L EL + G T + ++HD
Sbjct: 172 GNLDSATGERISDLLFELNRERGTTLVLVTHD 203
>pir||D70184 probable ribose/galactose ABC transporter mglA - Lyme disease
spirochete >gi|2688601|gb|AAC67018.1| (AE001168)
ribose/galactose ABC transporter, ATP-binding protein
(mglA) [Borrelia burgdorferi]
Length = 536
Score = 91.3 bits (223), Expect = 1e-17
Identities = 70/236 (29%), Positives = 118/236 (49%), Gaps = 18/236 (7%)
Query: 1 MTETVLKVENLKKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTI 60
M E VL +EN+ K + G A D VS + K GE ++GE+G GKTT +TI
Sbjct: 1 MKEDVLVLENITKKY---------GDFVANDNVSIKFKAGEVHAILGENGAGKTTLMKTI 51
Query: 61 LRLIEPTDGKIIFMGKDVTKLKGEELKWFRRKAQIMFQDPYSSLDPRQTVFQIIM---EP 117
+ + G+II G+++ E R ++FQ + L P+ T Q I+ E
Sbjct: 52 YGIHQVNSGRIILKGQEINFKDSSEA--IRNGIGMVFQ--HFMLIPQFTAVQNIILGYEN 107
Query: 118 VKFHGIQVDDPEEFVIRLLESVGLNEMHLYRYPHEFSGGQRQRIALARLLALKPEFIVLD 177
KF + + + L E GL ++ L + + S G Q+I + ++L + I+ D
Sbjct: 108 SKFGFLDYKQARKKISSLSEKYGL-KIDLEKRVEDLSVGMEQKIEILKVLYRNADIIIFD 166
Query: 178 EPTSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVE 233
EPT+ L S + +N LK L ++ G T + I+H + ++ ++ + +M LGK+V+
Sbjct: 167 EPTAVLAPSEVDDFINILKVLAQE-GHTVILITHKIKEIRSIAKKCTIMRLGKVVK 221
>pir||E82504 phosphate ABC transporter, ATP-binding protein VCA0073 [imported] -
Vibrio cholerae (group O1 strain N16961)
>gi|9657457|gb|AAF95987.1| (AE004350) phosphate ABC
transporter, ATP-binding protein [Vibrio cholerae]
Length = 251
Score = 91.3 bits (223), Expect = 1e-17
Identities = 72/253 (28%), Positives = 125/253 (48%), Gaps = 25/253 (9%)
Query: 1 MTETVLKVENLKKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTI 60
M T +ENL ++ G +A+ ++ I + L+G SGCGK+T R +
Sbjct: 1 MKTTKFNIENLDLFY---------GENQALKSINLPIPTRQVTALIGPSGCGKSTLLRCL 51
Query: 61 LRLIEPTDG-----KIIFMGKDVTKLKGEELKWFRRKAQIMFQDPYSSLDPRQTVFQIIM 115
R+ + +G K+ G+DV ++ R + ++FQ P ++++ +
Sbjct: 52 NRMNDLIEGVTITGKLTMDGQDV--YGNIDVSDLRIRVGMVFQKPNPF---PMSIYENVA 106
Query: 116 EPVKFHGIQVDDP-EEFVIRLLESVGL-NEMHLYRYPHEF--SGGQRQRIALARLLALKP 171
++ GI+ +E V R L L +E+ H F SGGQ+QR+ +AR +A++P
Sbjct: 107 YGLRAQGIKDKKHLDEVVERSLRGAALWDEVKDRLKSHAFGLSGGQQQRLCIARTIAMEP 166
Query: 172 EFIVLDEPTSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKL 231
+ I++DEPTSALD I +++L K +T + ++H + + +SDR +G+L
Sbjct: 167 DVILMDEPTSALDPIATHKIEELMEDL--KKNYTIVIVTHSMQQARRISDRTAFFLMGEL 224
Query: 232 VEVGPADRIFENP 244
VE IF NP
Sbjct: 225 VEHDDTQVIFSNP 237
>gb|AAB40787.1| (U82598) ferric enterobactin transport ATP-binding protein
[Escherichia coli]
Length = 318
Score = 88.5 bits (216), Expect = 1e-16
Identities = 70/248 (28%), Positives = 123/248 (49%), Gaps = 25/248 (10%)
Query: 1 MTETVLKVENLKKYFPIRGLFRTIGWVK--AVDGVSFEIKRGETFGLVGESGCGKTTTGR 58
MTE+V + +RG T+G+ K + ++ EI G ++G +GCGK+T R
Sbjct: 48 MTESVAR---------LRGEQLTLGYGKYTVAENLTVEIPDGHFTAIIGPNGCGKSTLLR 98
Query: 59 TILRLIEPTDGKIIFMGKDVTKLKGEELKWFRRKAQIMFQDPYSSLDPRQTVFQIIM--- 115
T+ RL+ P G + G+ + +E+ R+ ++ Q+ + D TV +++
Sbjct: 99 TLSRLMTPAHGHVWLDGEHIQHYASKEVA---RRIGLLAQNATTPGDI--TVQELVARGR 153
Query: 116 ---EPVKFHGIQVDDPEEFVIRLLESVGLNEMHLYRYPHEFSGGQRQRIALARLLALKPE 172
+P+ + D EE V + +++ G+ + + SGGQRQR +A +LA +
Sbjct: 154 YPHQPLFTRWRKED--EEAVTKAMQATGITHL-ADQSVDTLSGGQRQRAWIAMVLAQETA 210
Query: 173 FIVLDEPTSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLV 232
++LDEPT+ LD+S Q ++L L EL + G+T + HDL + + + GK+V
Sbjct: 211 IMLLDEPTTWLDISHQIDLLELLSELNREKGYTLAAVLHDLNQACRYASHLIALREGKIV 270
Query: 233 EVGPADRI 240
G I
Sbjct: 271 AQGAPKEI 278
>sp|P23878|FEPC_ECOLI FERRIC ENTEROBACTIN TRANSPORT ATP-BINDING PROTEIN FEPC
>gi|7442510|pir||B64792 ferric enterobactin ABC-type
transport system ATP-binding protein fepC [validated] -
Escherichia coli >gi|1786803|gb|AAC73689.1| (AE000164)
ATP-binding component of ferric enterobactin transport
[Escherichia coli K12]
Length = 271
Score = 88.5 bits (216), Expect = 1e-16
Identities = 70/248 (28%), Positives = 123/248 (49%), Gaps = 25/248 (10%)
Query: 1 MTETVLKVENLKKYFPIRGLFRTIGWVK--AVDGVSFEIKRGETFGLVGESGCGKTTTGR 58
MTE+V + +RG T+G+ K + ++ EI G ++G +GCGK+T R
Sbjct: 1 MTESVAR---------LRGEQLTLGYGKYTVAENLTVEIPDGHFTAIIGPNGCGKSTLLR 51
Query: 59 TILRLIEPTDGKIIFMGKDVTKLKGEELKWFRRKAQIMFQDPYSSLDPRQTVFQIIM--- 115
T+ RL+ P G + G+ + +E+ R+ ++ Q+ + D TV +++
Sbjct: 52 TLSRLMTPAHGHVWLDGEHIQHYASKEVA---RRIGLLAQNATTPGDI--TVQELVARGR 106
Query: 116 ---EPVKFHGIQVDDPEEFVIRLLESVGLNEMHLYRYPHEFSGGQRQRIALARLLALKPE 172
+P+ + D EE V + +++ G+ + + SGGQRQR +A +LA +
Sbjct: 107 YPHQPLFTRWRKED--EEAVTKAMQATGITHL-ADQSVDTLSGGQRQRAWIAMVLAQETA 163
Query: 173 FIVLDEPTSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLV 232
++LDEPT+ LD+S Q ++L L EL + G+T + HDL + + + GK+V
Sbjct: 164 IMLLDEPTTWLDISHQIDLLELLSELNREKGYTLAAVLHDLNQACRYASHLIALREGKIV 223
Query: 233 EVGPADRI 240
G I
Sbjct: 224 AQGAPKEI 231
>gb|AAF43494.1|AF130119_1 (AF130119) oligopeptide permease D [Mycoplasma bovis]
Length = 156
Score = 88.5 bits (216), Expect = 1e-16
Identities = 48/134 (35%), Positives = 73/134 (53%), Gaps = 8/134 (5%)
Query: 189 ANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVGPADRIFENPLHPY 248
A++L +++++++ + + ISH++ VV + I VMY GK+VE G IF NP HPY
Sbjct: 1 ASVLALFEQIRQEYNISIILISHNISVVAKFCEYIYVMYAGKIVERGTRKDIFTNPAHPY 60
Query: 249 TQMLFSAIPIPDPDLAREMKKKRMKVTGEPPSPINPPKGCRFHPRCPYAKAGLCDKEEPP 308
T L SAIP D + + + G PP N P G F PR +A + ++EPP
Sbjct: 61 TWALISAIPENDDE-------RLFSIQGTPPDMANLPIGDPFAPRNDFA-LEIDYEKEPP 112
Query: 309 MVEVEKDHYVACWL 322
++E+ H A WL
Sbjct: 113 LIEINSHHKAATWL 126
>pir||S16298 ferric enterobactin transport protein fepC - Escherichia coli
>gi|41432|emb|CAA40709.1| (X57471) fepC [Escherichia
coli]
Length = 271
Score = 88.2 bits (215), Expect = 1e-16
Identities = 69/243 (28%), Positives = 122/243 (49%), Gaps = 25/243 (10%)
Query: 1 MTETVLKVENLKKYFPIRGLFRTIGWVK--AVDGVSFEIKRGETFGLVGESGCGKTTTGR 58
MTE+V + +RG T+G+ K + ++ EI G ++G +GCGK+T R
Sbjct: 1 MTESVAR---------LRGEQLTLGYGKYTVAENLTVEIPDGHFTAIIGPNGCGKSTLLR 51
Query: 59 TILRLIEPTDGKIIFMGKDVTKLKGEELKWFRRKAQIMFQDPYSSLDPRQTVFQIIM--- 115
T+ RL+ P G + G+ + +E+ R+ ++ Q+ + D TV +++
Sbjct: 52 TLSRLMTPAHGHVWLDGEHIQHYASKEVA---RRIGLLAQNATTPGDI--TVQELVARGR 106
Query: 116 ---EPVKFHGIQVDDPEEFVIRLLESVGLNEMHLYRYPHEFSGGQRQRIALARLLALKPE 172
+P+ + D EE V + +++ G+ + + SGGQRQR +A +LA +
Sbjct: 107 YPHQPLFTRWRKED--EEAVTKAMQATGITHL-ADQSVDTLSGGQRQRAWIAMVLAQETA 163
Query: 173 FIVLDEPTSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLV 232
++LDEPT+ LD+S Q ++L L EL + G+T + HDL + + + GK+V
Sbjct: 164 IMLLDEPTTWLDISHQIDLLELLSELNREKGYTLAAVLHDLNQACRYASHLIALREGKIV 223
Query: 233 EVG 235
G
Sbjct: 224 AQG 226
>pir||E72314 ribose ABC transporter, ATP-binding protein - Thermotoga maritima
(strain MSB8) >gi|4981493|gb|AAD36035.1|AE001758_13
(AE001758) ribose ABC transporter, ATP-binding protein
[Thermotoga maritima]
Length = 523
Score = 88.2 bits (215), Expect = 1e-16
Identities = 69/244 (28%), Positives = 120/244 (48%), Gaps = 13/244 (5%)
Query: 3 ETVLKVENLKKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTILR 62
E +L+ N+ K FP V AV+ V+ +I +GE LVGE+G GK+T + +
Sbjct: 10 EVLLEARNITKTFP---------GVIAVNNVTLQIYKGEVCALVGENGAGKSTLMKILAG 60
Query: 63 LIEPTDGKIIFMGKDVTKLKGEELKWFRRKAQIMFQDPYSSLDPRQTVFQIIMEPV-KFH 121
+ +G+I GK+V E + D +L + +F + EPV +F
Sbjct: 61 VYPDYEGQIFLEGKEVRFRNPREAQENGIALIPQELDLVPNLSSAENIF-LSREPVNEFG 119
Query: 122 GIQVDDPEEFVIRLLESVGLNEMHLYRYPHEFSGGQRQRIALARLLALKPEFIVLDEPTS 181
I+ E +L +G+N + + S Q+Q +A+A+ L+L + I++DEPTS
Sbjct: 120 VIEYQKMFEQASKLFSKLGVN-IDPKTKVEDLSTSQQQMVAIAKALSLDAKIIIMDEPTS 178
Query: 182 ALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVGPADRIF 241
A+ + N ++ L+ + G + ++ISH L + ++DR+ VM G+ V GP +
Sbjct: 179 AIGKRETEQLFNIIRSLKNE-GKSVIYISHRLEEIFEIADRVVVMRDGRKVGEGPIEEFD 237
Query: 242 ENPL 245
+ L
Sbjct: 238 HDKL 241
Score = 82.7 bits (201), Expect = 5e-15
Identities = 66/241 (27%), Positives = 116/241 (47%), Gaps = 22/241 (9%)
Query: 1 MTETVLKVENLKKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTI 60
+T+ + +VE +K + R VD VSF +++GE G+ G G G+T I
Sbjct: 261 ITDEIFRVEGIKLWSLDRKKL-------LVDDVSFYVRKGEVLGIYGLVGAGRTELLEAI 313
Query: 61 LRLIEP-TDGKIIFMGKDVTKLKGEE--------LKWFRRKAQIMFQDPYSSLDPRQTVF 111
T+GK+ GK++ + + R+ A ++ Q S+ T+
Sbjct: 314 FGAHPGRTEGKVFIGGKEIKIHSPRDAVKNGIGLVPEDRKTAGLILQ---MSVLHNITLP 370
Query: 112 QIIMEPV--KFHGIQVDDPEEFVIRLLESVGLNEMHLYRYPHEFSGGQRQRIALARLLAL 169
++M+ + KF I +E V +E + + Y+ SGG +Q++ LA+ LA+
Sbjct: 371 SVVMKLIVRKFGLIDSQLEKEIVRSFIEKLNIKTPSPYQIVENLSGGNQQKVVLAKWLAI 430
Query: 170 KPEFIVLDEPTSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLG 229
KP+ ++LDEPT +DV+ ++ I + E+ G + +S +L + MSDRI VM G
Sbjct: 431 KPKVLLLDEPTRGIDVNAKSEIYKLISEMAVS-GMGVVMVSSELPEILAMSDRILVMSEG 489
Query: 230 K 230
+
Sbjct: 490 R 490
>pir||A75083 ATP-binding transport protein PAB1668 - Pyrococcus abyssi (strain
Orsay) >gi|5458478|emb|CAB49966.1| (AJ248286)
ATP-BINDING TRANSPORT PROTEIN [Pyrococcus abyssi]
Length = 315
Score = 88.2 bits (215), Expect = 1e-16
Identities = 64/235 (27%), Positives = 115/235 (48%), Gaps = 17/235 (7%)
Query: 1 MTETVLKVENLKKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTI 60
M +++ + L K+F R + V ++ ++ +G +G +G +G GKTTT + +
Sbjct: 1 MPTYIIETKELTKFFGKRNV---------VYNLNLKVPKGAVYGFLGPNGAGKTTTIKML 51
Query: 61 LRLIEPTDGKIIFMGKDVTKLKGEELKWFRRKAQIMFQDPYSSLDPRQTVFQIIMEPVKF 120
++PT G+I +G ++ + E +K R M + P + D T+F+ ++ +
Sbjct: 52 TGALKPTYGEIKIIGMEMPR---ERVK-IMRNVGYMPERPLAYDD--MTIFEFLVYMGRL 105
Query: 121 HGIQVDDPEEFVIRLLESVGLNEMHLYRYPHEFSGGQRQRIALARLLALKPEFIVLDEPT 180
G+ D L+ G+ + + E S GQRQR+ A L PE ++LDEPT
Sbjct: 106 LGLPKDKAVNQARELMAYTGVGRLAFNKI-EELSSGQRQRVLFASALMGDPELLILDEPT 164
Query: 181 SALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVG 235
S LD + + + EL K G T SH + ++ M + +G++ G+L+E G
Sbjct: 165 SNLDPLGRMEFIGKILEL-AKSGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQG 218
>pir||D75308 sugar ABC transportor, ATP-binding protein - Deinococcus
radiodurans (strain R1)
>gi|6459951|gb|AAF11701.1|AE002049_6 (AE002049) sugar
ABC transportor, ATP-binding protein [Deinococcus
radiodurans]
Length = 455
Score = 88.2 bits (215), Expect = 1e-16
Identities = 69/247 (27%), Positives = 120/247 (47%), Gaps = 24/247 (9%)
Query: 1 MTETVLKVENLKKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTI 60
M E +L E++ KY+ + AV + EI E VG SGCGK+TT R I
Sbjct: 36 MAEVIL--EHVNKYYGNKQ--------HAVKDFNLEIADREFMVFVGPSGCGKSTTLRMI 85
Query: 61 LRLIEPTDGKIIFMGKDVTKLKGEELKWFRRKAQIMFQDPYSSLDPRQTVFQIIMEPVKF 120
L + +DG + + V + ++ R ++FQ+ +L P V++ + +K
Sbjct: 86 AGLEDISDGVLRIGDRVVNDVPPKD-----RDIAMVFQN--YALYPHMNVYENMAFGLKL 138
Query: 121 HGI---QVDDPEEFVIRLLESVGLNEMHLYRYPHEFSGGQRQRIALARLLALKPEFIVLD 177
++D R+L+ L L R P E SGGQRQR+A+ R + +P ++D
Sbjct: 139 RKTPREEIDKRVRDAARILQIEHL----LGRKPKELSGGQRQRVAMGRAIVREPSVFLMD 194
Query: 178 EPTSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVGPA 237
EP S LD ++ + + + +L + G T ++++HD + +RI VM G +++V
Sbjct: 195 EPLSNLDAKLRVEMRSQISQLHRRLGATIIYVTHDQVEAMTLGNRIVVMRDGVIMQVDTP 254
Query: 238 DRIFENP 244
+++ P
Sbjct: 255 MNLYDFP 261
>gb|AAF65552.1|AF249879_1 (AF249879) liver bile salt export pump [Oryctolagus cuniculus]
Length = 1321
Score = 87.8 bits (214), Expect = 2e-16
Identities = 72/256 (28%), Positives = 120/256 (46%), Gaps = 30/256 (11%)
Query: 1 MTETVLKVENLK---KYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTG 57
M+E K+E +K ++ + + + VK ++ +S IK GE LVG SG GK+T
Sbjct: 406 MSEDGYKLERIKGEIEFHNVTFHYPSRPEVKILNNLSMVIKPGEMTALVGPSGAGKSTAL 465
Query: 58 RTILRLIEPTDGKIIFMGKDVTKLKGEELKWFRRKAQIMFQDPYSSLDPRQTVFQIIMEP 117
+ I R PT+G + D+ + ++W R + I+ Q+P F I E
Sbjct: 466 QLIHRFYGPTEGMVTVESHDI---RSSHIQWLRNQIGIVEQEPV-------LFFHTIAEK 515
Query: 118 VKFHGIQVDDPEEFVIRLLESVGLNEMHLYRYPHEF-----------SGGQRQRIALARL 166
+++ G + E+ + E+ N + P +F SGGQ+QR+A+AR
Sbjct: 516 IRY-GREDATMEDLIQAAKEANAYN--FIMDLPQQFDTLVGEGGGQMSGGQKQRVAIARA 572
Query: 167 LALKPEFIVLDEPTSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVM 226
L P+ ++LD TSALD +A + L + Q HG T + ++H ++ IG
Sbjct: 573 LIRNPKILLLDMATSALDNESEAMVQEALSKTQ--HGHTIVSVAHRPATIRTADVIIGCE 630
Query: 227 YLGKLVEVGPADRIFE 242
+ G VE G + + E
Sbjct: 631 H-GAAVERGTEEELLE 645
Score = 84.7 bits (206), Expect = 1e-15
Identities = 62/221 (28%), Positives = 111/221 (50%), Gaps = 17/221 (7%)
Query: 27 VKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTILRLIEPTDGKIIFMGKDVTKLKGEEL 86
++ ++G+S + +T VG SGCGK+T+ + + R +P GK++ G D K+ +
Sbjct: 1093 IQVLNGLSVSMSPRQTLAFVGSSGCGKSTSIQLLERFYDPDHGKVMIDGHDSRKV---NI 1149
Query: 87 KWFRRKAQIMFQDPY-------SSLDPRQTVFQIIMEPVKFHGIQVDDPEEFVIRLLESV 139
++ R I+ Q+P ++ +I ME + + +FV+ L E
Sbjct: 1150 QFLRSNIGIVSQEPVLFACSIKDNIKYGDNTQEIPMERI-IAAAKKAQVHDFVMSLPEKY 1208
Query: 140 GLNEMHLYRYPHEFSGGQRQRIALARLLALKPEFIVLDEPTSALDVSVQANILNTLKELQ 199
E ++ + S G++QRIA+AR + P+ ++LDE TSALD + + L + +
Sbjct: 1209 ---ETNVGSQGSQLSRGEKQRIAIARAIVRDPKILLLDEATSALDTESEKTVQVALDKAR 1265
Query: 200 EKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVGPADRI 240
E G T + I+H L ++ SD I VM G ++E G + +
Sbjct: 1266 E--GRTCIVIAHRLSTIQ-NSDIIAVMSQGMVIEKGTHEEL 1303
>emb|CAB95741.1| (AJ276960) putative ABC transporter [Staphylococcus xylosus]
Length = 257
Score = 87.0 bits (212), Expect = 3e-16
Identities = 61/217 (28%), Positives = 112/217 (51%), Gaps = 14/217 (6%)
Query: 1 MTETVLKVENLKKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTI 60
M+ V +++N+ YF + + ++ ++ +I RGE +VG +G GK+T + I
Sbjct: 1 MSTPVFELKNIDYYFDNK---------QVLENINIKINRGEFVAIVGPNGAGKSTLLKII 51
Query: 61 LRLIEPTDGKIIFMGKDVTKLKGE-ELKWFRRKAQIMFQDPYSSLDPRQTVFQIIMEPVK 119
L L+ G+I GKD + ++ + +KAQ F+ + + + +
Sbjct: 52 LGLLPIQKGRIYVDGKDYNGNQSLLKISYVSQKAQA-FKAGFPASVKEVVISGLTKRKKL 110
Query: 120 FHGIQVDDPEEFVIRLLESVGLNEMHLYRYPHEFSGGQRQRIALARLLALKPEFIVLDEP 179
F +D EE V +L + + + + + E SGGQ+QR+ +AR L +P ++LDEP
Sbjct: 111 FQWFNRND-EESVKTVLSRLNIEHL-IDKNIAELSGGQQQRVLIARALISEPSVLILDEP 168
Query: 180 TSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVV 216
TS +D + TL+ L+++ G T + ++HD+GVV
Sbjct: 169 TSGIDAKHVSEFYETLETLKQE-GVTIILVTHDIGVV 204
>gb|AAD16030.1| (AF082183) ABC transporter MutF [Streptococcus mutans]
Length = 302
Score = 86.2 bits (210), Expect = 5e-16
Identities = 62/243 (25%), Positives = 120/243 (48%), Gaps = 26/243 (10%)
Query: 1 MTETVLKVENLKKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTI 60
MT+ +L + NL K F G K +D ++ I GE +G +G +G GK+T + I
Sbjct: 1 MTKPLLSINNLSKSF---------GNQKVLDHLNMTISPGEIYGFLGVNGAGKSTAMKII 51
Query: 61 LRLIEPTDGKIIFMGKDVTKLKGEELKWFRRKAQIMFQDPYSSLDPRQTVF---QIIMEP 117
L L+ G+I+ +G+ + + + + L + + ++P + P T F Q+I E
Sbjct: 52 LGLLPKDSGEIVALGRPLPENRSQILP----EIGALIEEP--AFYPNLTGFENLQLIQEL 105
Query: 118 VKFHGIQVDDPEEFVIRLLESVGLNEMHLYRYPHEFSGGQRQRIALARLLALKPEFIVLD 177
P++ + ++E+ G+ + +S G +QR+ ++ L P+F++LD
Sbjct: 106 ANL-------PKDNIKVVMEATGIYYAK-DKLVRNYSLGMKQRLGISMALIKFPKFLILD 157
Query: 178 EPTSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVGPA 237
EPT+ LD + ++ L +K T L SH L ++ ++D +G++ G L+ G
Sbjct: 158 EPTNGLDPDGIHQMRQLIRSLPQKFNMTILISSHILSEIENLADTVGIIKDGHLIYEGGI 217
Query: 238 DRI 240
+++
Sbjct: 218 NQL 220
>gb|AAD44229.1|AF143772_35 (AF143772) DrrA [Mycobacterium avium]
Length = 315
Score = 85.8 bits (209), Expect = 6e-16
Identities = 68/240 (28%), Positives = 110/240 (45%), Gaps = 16/240 (6%)
Query: 1 MTETVLKVENLKKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTI 60
M+ ++VE L K F G A+ GV F + G GL+G +G GKTTT +
Sbjct: 1 MSAPAIEVEGLTKKFG--------GSTVALAGVDFSVPAGTVCGLLGHNGAGKTTTINIL 52
Query: 61 LRLIEPTDGKIIFMGKDVTKLKGEELKWFRRKAQIMFQDPYSSLDPRQTVFQIIMEPVKF 120
LI PT G+ G DV + E +A I ++ LDP T + ++ +
Sbjct: 53 STLIRPTSGRASVAGHDVVRRPAEV------RASIGMAGQFTGLDPMLTGRENLVLFSRL 106
Query: 121 HGIQVDDPEEFVIRLLESVGLNEMHLYRYPHEFSGGQRQRIALARLLALKPEFIVLDEPT 180
G+ + LLE L + R +SGG +R+ LA L + P+ + LDEPT
Sbjct: 107 RGLNRRRAKARADELLEQFNLVDA-ADRRLSTYSGGMFRRVDLASALVVPPKVLFLDEPT 165
Query: 181 SALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVEVGPADRI 240
+ LD + ++ + L+ + G T L + L +SD I V+ G+++ G ++ +
Sbjct: 166 TGLDPRSRRDVWALVSSLRVQ-GITVLLTTQYLEEADVLSDSIVVIDHGRVIASGTSEEL 224
>pir||S76273 hypothetical protein - Synechocystis sp. (strain PCC 6803)
>gi|1001500|dbj|BAA10125.1| (D64000) high-affinity
branched-chain amino acid transport ATP-binding protein
[Synechocystis sp.]
Length = 373
Score = 85.0 bits (207), Expect = 1e-15
Identities = 66/251 (26%), Positives = 123/251 (48%), Gaps = 22/251 (8%)
Query: 1 MTETVLKVENLKKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTI 60
MT +L++++L F +A++ ++F + GE ++G +G GKTT I
Sbjct: 1 MTSKILEIQDLTVSFD---------GFRALNHLTFSMNPGELRVIIGPNGAGKTTFLDVI 51
Query: 61 LRLIEPTDGKIIFMGKDVTKLKGEELKWFRRKAQIMFQDP--YSSLDPRQTVFQIIMEPV 118
++PT+G+++F GKD+ K+ E + R FQ P Y +L + + +
Sbjct: 52 TGKVQPTEGRVLFQGKDIRKI--PEYRIARLGVGRKFQTPRVYLNLTVAENLDLAVNRKK 109
Query: 119 KFHGIQVDD----PEEFVIRLLESVGLN-EMHLYRYPHEFSGGQRQRIALARLLALKPEF 173
G + + V LLE++GL + HL S G++QR+ + L+A P
Sbjct: 110 SVWGTLMGQATGAEQRSVGGLLETIGLTPKAHL--AAALLSHGEKQRLEIGMLVAQSPTL 167
Query: 174 IVLDEPTSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRIGVMYLGKLVE 233
+++DEP + L N+ + L L E H + + I HD+ V+ ++ ++ V++ G ++
Sbjct: 168 LLVDEPVAGLTDEETENVGDLLLALAESH--SIIVIEHDMEFVRQIARKVTVLHQGSVLC 225
Query: 234 VGPADRIFENP 244
G D+I +P
Sbjct: 226 EGNMDQIQNDP 236
>pir||B83354 probable ATP-binding component of ABC transporter PA2329 [imported]
- Pseudomonas aeruginosa (strain PAO1)
>gi|9948364|gb|AAG05717.1|AE004659_3 (AE004659) probable
ATP-binding component of ABC transporter [Pseudomonas
aeruginosa]
Length = 278
Score = 85.0 bits (207), Expect = 1e-15
Identities = 65/226 (28%), Positives = 104/226 (45%), Gaps = 19/226 (8%)
Query: 1 MTETVLKVENLKKYFPIRGLFRTIGWVKAVDGVSFEIKRGETFGLVGESGCGKTTTGRTI 60
M+E +L + +P R GW + + GE ++G SG GK++ R +
Sbjct: 1 MSEALLDARGIALGYP-----RGAGWQAVLGDFELRLGAGEVVSILGPSGVGKSSLLRVL 55
Query: 61 LRLIEPTDGKIIFMGKDVTKLKGEELKWFRRKAQIMFQDPYSSLDPRQTVFQIIMEPVKF 120
L EP G + ++ GE L+ + FQDP SL P + + + + F
Sbjct: 56 AGLQEPAAGSV--------RVLGEPLRGPHPGVAVAFQDP--SLLPWLNLEKNVAFGLDF 105
Query: 121 HG---IQVDDPEEFVIRLLESVGLNEMHLYRYPHEFSGGQRQRIALARLLALKPEFIVLD 177
+ + V + + +VGL RYP + SGG QR ALAR LA +P+ ++LD
Sbjct: 106 ARQPHLDAATRQARVDQAIAAVGLEHARA-RYPAQLSGGMAQRTALARCLARQPKVLLLD 164
Query: 178 EPTSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMSDRI 223
EP ALD +A++ L + G + I+HD+ +S+RI
Sbjct: 165 EPFGALDEVTRADMQQLLLRAIHERGTAVVLITHDIDEALLLSERI 210
>pir||T44565 probable ATP-dependent transport protein [imported] - Pyrococcus
furiosus >gi|6066238|gb|AAF03223.1|AF156097_3 (AF156097)
hypothetical ATP-dependent transporter [Pyrococcus
furiosus]
Length = 247
Score = 83.9 bits (204), Expect = 2e-15
Identities = 71/250 (28%), Positives = 125/250 (49%), Gaps = 29/250 (11%)
Query: 1 MTETVLKVENLKKYFPIRGLFRTIGWVKAVD-----GVSFEIKRGETFGLVGESGCGKTT 55
M T+LKVENL WVK D G++ I E ++G +G GK+T
Sbjct: 1 MVITMLKVENL--------------WVKVEDKEILKGINLNIGENELHVVMGPNGSGKST 46
Query: 56 TGRTILR--LIEPTDGKIIFMGKDVTKLKGEELKWFRRKAQIMFQDPYSSLDPRQTVF-Q 112
TI + G I+F G+++T L EE ++ + FQ P + F Q
Sbjct: 47 LALTIAGHPKYKVIQGSILFEGEEITSLPPEER--VKKGIFLSFQHPVEVDGVKIIHFLQ 104
Query: 113 IIMEPVKFHGIQVDDPEEFVIRLLESVGLNEMHLYRYPHE-FSGGQRQRIALARLLALKP 171
I++ +K G+ E + ++ +GL+E L R+ + FSGG+R+++ + + ++P
Sbjct: 105 RILKNLK--GMDEIKAYEAIYTAIKELGLDESILTRFLNVGFSGGERKKLEMLQAYLVEP 162
Query: 172 EFIVLDEPTSALDVSVQANILNTLKELQEKHGFTYLFISHDLGVVKYMS-DRIGVMYLGK 230
+ ++LDEP S +DV I ++ L E+ G + L I+H +++Y++ ++ V+ GK
Sbjct: 163 KLLILDEPDSGVDVDSLKTIAKIIRRLYER-GTSVLLITHYGRILEYLNPTKVHVIKNGK 221
Query: 231 LVEVGPADRI 240
+V G D +
Sbjct: 222 IVASGSIDLV 231
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.322 0.142 0.429
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 129074874
Number of Sequences: 2977
Number of extensions: 5767061
Number of successful extensions: 24189
Number of sequences better than 1.0e-10: 1780
Number of HSP's better than 0.0 without gapping: 478
Number of HSP's successfully gapped in prelim test: 1302
Number of HSP's that attempted gapping in prelim test: 20467
Number of HSP's gapped (non-prelim): 2286
length of query: 326
length of database: 189,106,746
effective HSP length: 52
effective length of query: 274
effective length of database: 157,985,422
effective search space: 43288005628
effective search space used: 43288005628
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.9 bits)
S2: 165 (68.7 bits)