BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB1897 (dfp) DE:DNA/pantothenate metabolism flavoprotein (dfp)
(401 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||E75114 dna/pantothenate metabolism flavoprotein (dfp) PAB18... 777 0.0
pir||G71018 pantothenate metabolism flavoprotein dfp homolog PH1... 719 0.0
gi|11499235 pantothenate metabolism flavoprotein (dfp) [Archaeog... 328 9e-89
pir||D69029 pantothenate metabolism flavoprotein dfp homolog MTH... 321 1e-86
sp|Q58323|DFP_METJA DNA/PANTOTHENATE METABOLISM FLAVOPROTEIN HOM... 269 3e-71
gb|AAK40553.1| DNA/pantothenate metabolism flavoprotein (dfp) [S... 269 4e-71
gb|AAG19087.1| (AE005007) pantothenate metabolism flavoprotein; ... 266 4e-70
pir||B70371 pantothenate metabolism flavoprotein dfp - Aquifex a... 237 2e-61
sp|O51752|DFP_BORBU DNA/PANTOTHENATE METABOLISM FLAVOPROTEIN HOM... 226 4e-58
pir||A72498 probable DNA/pantothenate metabolism flavoprotein AP... 224 1e-57
pir||A82351 DNA/pantothenate metabolism flavoprotein VC0215 [imp... 217 2e-55
pir||A72223 pantothenate metabolism flavoprotein dfp homolog TM1... 211 1e-53
pir||D81819 hypothetical protein NMA1916 [imported] - Neisseria ... 208 7e-53
pir||A81058 DNA/pantothenate metabolism flavoprotein NMB1658 [im... 208 9e-53
dbj|BAB06229.1| (AP001515) flavoprotein [Bacillus halodurans] 205 1e-51
gb|AAF04763.1| (AF104227) pantothenate metabolism flavoprotein h... 201 1e-50
pir||B82982 DNA/pantothenate metabolism flavoprotein PA5320 [imp... 198 7e-50
pir||D69878 pantothenate metabolism flavoprotein dfp homolog ylo... 196 3e-49
emb|CAC12018.1| (AL445065) DNA/pantothenate metabolism flavoprot... 193 3e-48
sp|P44953|DFP_HAEIN DNA/PANTOTHENATE METABOLISM FLAVOPROTEIN HOM... 190 2e-47
gb|AAD21550.1| (AF088896) pantothenate metabolism flavoprotein [... 184 2e-45
emb|CAB93357.1| (AL357523) putative flavoprotein homologue (part... 184 2e-45
sp|P71661|DFP_MYCTU DNA/PANTOTHENATE METABOLISM FLAVOPROTEIN HOM... 173 4e-42
sp|P24285|DFP_ECOLI DNA/PANTOTHENATE METABOLISM FLAVOPROTEIN >gi... 173 4e-42
gb|AAA61992.1| (L10328) dfp (CG Site No. 18430) [Escherichia coli] 172 5e-42
pir||H82842 DNA/pantothenate metabolism flavoprotein XF0149 [imp... 171 9e-42
pir||H75501 DNA/pantothenate metabolism flavoprotein - Deinococc... 167 2e-40
sp|P73881|DFP_SYNY3 DNA/PANTOTHENATE METABOLISM FLAVOPROTEIN HOM... 166 5e-40
gb|AAB97414.1| (AF042096) panthotenate metabolism flavoprotein [... 143 4e-33
pir||E71889 pantothenate metabolism flavoprotein dfp homolog HP0... 134 2e-30
pir||A64625 pantothenate metabolism flavoprotein dfp homolog HP0... 133 3e-30
pir||F81354 DNA /pantothenate metabolism flavoprotein Cj0822 [im... 125 1e-27
sp|Q54433|DFP_STRMU DNA/PANTOTHENATE METABOLISM FLAVOPROTEIN HOM... 94 3e-18
gi|9634784 ORF FPV114 HAL3 domain [Fowlpox virus] >gi|7271612|gb... 80 3e-14
pir||T37719 thymidylate synthase-like DNA metabolism protein - f... 71 3e-11
>pir||E75114 dna/pantothenate metabolism flavoprotein (dfp) PAB1897 - Pyrococcus
abyssi (strain Orsay) >gi|5458141|emb|CAB49630.1|
(AJ248285) DNA/pantothenate metabolism flavoprotein
(dfp) [Pyrococcus abyssi]
Length = 401
Score = 777 bits (1985), Expect = 0.0
Identities = 401/401 (100%), Positives = 401/401 (100%)
Query: 1 MLSHIKLIYATKSRKLVGKKIVLAIPGSIAAVECVKLARELIRHGAEVHAVMSPSATKII 60
MLSHIKLIYATKSRKLVGKKIVLAIPGSIAAVECVKLARELIRHGAEVHAVMSPSATKII
Sbjct: 1 MLSHIKLIYATKSRKLVGKKIVLAIPGSIAAVECVKLARELIRHGAEVHAVMSPSATKII 60
Query: 61 HPYAMEFATGNPVITEITGSIEHVELAGEHENKADLILVCPATANTISKIACGIDDTPVT 120
HPYAMEFATGNPVITEITGSIEHVELAGEHENKADLILVCPATANTISKIACGIDDTPVT
Sbjct: 61 HPYAMEFATGNPVITEITGSIEHVELAGEHENKADLILVCPATANTISKIACGIDDTPVT 120
Query: 121 TVVTTAFPHIPIMIAPAMHESMYKHPIVRENIEKLKKLGVEFIGPRIEEGKAKVATIDEI 180
TVVTTAFPHIPIMIAPAMHESMYKHPIVRENIEKLKKLGVEFIGPRIEEGKAKVATIDEI
Sbjct: 121 TVVTTAFPHIPIMIAPAMHESMYKHPIVRENIEKLKKLGVEFIGPRIEEGKAKVATIDEI 180
Query: 181 VYRVIKKLHPKTLEGKRVLITAGATREYIDPIRFITNASSGKMGVALAEEAEFRGAEVTL 240
VYRVIKKLHPKTLEGKRVLITAGATREYIDPIRFITNASSGKMGVALAEEAEFRGAEVTL
Sbjct: 181 VYRVIKKLHPKTLEGKRVLITAGATREYIDPIRFITNASSGKMGVALAEEAEFRGAEVTL 240
Query: 241 IRTRGSVKSFVENQIEVETVEEMLGAIEEELTKKKYDVVIMAAAVSDFKPKIKAKEKIKS 300
IRTRGSVKSFVENQIEVETVEEMLGAIEEELTKKKYDVVIMAAAVSDFKPKIKAKEKIKS
Sbjct: 241 IRTRGSVKSFVENQIEVETVEEMLGAIEEELTKKKYDVVIMAAAVSDFKPKIKAKEKIKS 300
Query: 301 DKSITLELVPNPKIIRKIKEIQSDVFLVGFKAETSMEKLISEAKKQIESAGSDLVIGNTL 360
DKSITLELVPNPKIIRKIKEIQSDVFLVGFKAETSMEKLISEAKKQIESAGSDLVIGNTL
Sbjct: 301 DKSITLELVPNPKIIRKIKEIQSDVFLVGFKAETSMEKLISEAKKQIESAGSDLVIGNTL 360
Query: 361 EAFGSEESKVVIVGKDFVKELPRMKKRELAERIWDEIEKKI 401
EAFGSEESKVVIVGKDFVKELPRMKKRELAERIWDEIEKKI
Sbjct: 361 EAFGSEESKVVIVGKDFVKELPRMKKRELAERIWDEIEKKI 401
>pir||G71018 pantothenate metabolism flavoprotein dfp homolog PH1444 -
Pyrococcus horikoshii >gi|3257868|dbj|BAA30551.1|
(AP000006) 401aa long hypothetical protein DFP
[Pyrococcus horikoshii]
Length = 401
Score = 719 bits (1835), Expect = 0.0
Identities = 361/401 (90%), Positives = 389/401 (96%)
Query: 1 MLSHIKLIYATKSRKLVGKKIVLAIPGSIAAVECVKLARELIRHGAEVHAVMSPSATKII 60
ML+H+K IYA KSRKLVGKKIVLAIPGSIAAVECVKLARELIRHGAEVHAVM+PSATKII
Sbjct: 1 MLNHVKRIYAKKSRKLVGKKIVLAIPGSIAAVECVKLARELIRHGAEVHAVMTPSATKII 60
Query: 61 HPYAMEFATGNPVITEITGSIEHVELAGEHENKADLILVCPATANTISKIACGIDDTPVT 120
HPYAMEFATGNPVITEITG IEHVELAGEHENKADLILVCPATANTISKIACGIDDTPVT
Sbjct: 61 HPYAMEFATGNPVITEITGFIEHVELAGEHENKADLILVCPATANTISKIACGIDDTPVT 120
Query: 121 TVVTTAFPHIPIMIAPAMHESMYKHPIVRENIEKLKKLGVEFIGPRIEEGKAKVATIDEI 180
TVVTTAFPHIPIMIAPAMHESMYKHPIVRENIEKLKKLGVEFIGPRIEEGKAKVA+IDEI
Sbjct: 121 TVVTTAFPHIPIMIAPAMHESMYKHPIVRENIEKLKKLGVEFIGPRIEEGKAKVASIDEI 180
Query: 181 VYRVIKKLHPKTLEGKRVLITAGATREYIDPIRFITNASSGKMGVALAEEAEFRGAEVTL 240
VYRVI+KLHPKTL+GKRVL+TAGATREYIDPIRFITNASSGKMGVALAEEAEFRGAEVTL
Sbjct: 181 VYRVIRKLHPKTLKGKRVLVTAGATREYIDPIRFITNASSGKMGVALAEEAEFRGAEVTL 240
Query: 241 IRTRGSVKSFVENQIEVETVEEMLGAIEEELTKKKYDVVIMAAAVSDFKPKIKAKEKIKS 300
I+T+GSV SFVENQI+VETVEEML AIE+ELT+KKYDVVIMAAAVSDFKPKIKA++KIKS
Sbjct: 241 IKTKGSVNSFVENQIQVETVEEMLAAIEKELTEKKYDVVIMAAAVSDFKPKIKAEDKIKS 300
Query: 301 DKSITLELVPNPKIIRKIKEIQSDVFLVGFKAETSMEKLISEAKKQIESAGSDLVIGNTL 360
+KSIT+ELVPNPKII +IKE+Q DVFLVGFKAET+MEKLI EAKKQIE A SD+VIGNTL
Sbjct: 301 NKSITIELVPNPKIIDRIKELQPDVFLVGFKAETTMEKLIQEAKKQIERAKSDIVIGNTL 360
Query: 361 EAFGSEESKVVIVGKDFVKELPRMKKRELAERIWDEIEKKI 401
EAFGS+ESKV+I+G++F KELP+M KRELAERIWDEIEK++
Sbjct: 361 EAFGSDESKVIIIGRNFEKELPKMNKRELAERIWDEIEKRL 401
>gi|11499235 pantothenate metabolism flavoprotein (dfp) [Archaeoglobus fulgidus]
>gi|7449270|pir||D69455 pantothenate metabolism
flavoprotein dfp homolog AF1645 - Archaeoglobus fulgidus
>gi|2648905|gb|AAB89597.1| (AE000989) pantothenate
metabolism flavoprotein (dfp) [Archaeoglobus fulgidus]
Length = 404
Score = 328 bits (831), Expect = 9e-89
Identities = 197/403 (48%), Positives = 280/403 (68%), Gaps = 18/403 (4%)
Query: 1 MLS-HIKLIYATKSRKLVGKKIVLAIPGSIAAVECVKLARELIRHGAEVHAVMSPSATKI 59
MLS H++ I +SRKL KKIVL + GSIAAVE VKLAREL+R GA+V AVMS +A KI
Sbjct: 1 MLSVHLERIRGRRSRKLERKKIVLGVTGSIAAVETVKLARELVRRGADVTAVMSRAARKI 60
Query: 60 IHPYAMEFATGNPVITEITGSIEHVELAGEHENKADLILVCPATANTISKIACGIDDTPV 119
IHPYA+EFATG V+TEITGSIEHV L GE+ + ADL L+ P TANTISKIA GIDDTPV
Sbjct: 61 IHPYALEFATGKRVVTEITGSIEHVNLLGEYGD-ADLFLIAPCTANTISKIAQGIDDTPV 119
Query: 120 TTVVTTAFPH-IPIMIAPAMHESMYKHPIVRENIEKLKKLGVEFIGPRIEEGKAKVATID 178
TT TTA PI+I PAMHE+M ++ V ENI++L +G+EF+ PRIEEGKAK + +
Sbjct: 120 TTFATTALGSGKPIIIVPAMHEAMMRNKAVLENIQRLIDMGIEFVQPRIEEGKAKFPSTE 179
Query: 179 EIVYRVIKKLHPKTLEGKRVLITAGATREYIDPIRFITNASSGKMGVALAEEAEFRGAEV 238
I V ++L+PK ++GKRV++T+G T E IDPIRFI+N SSG+MG+ +A E RGA+V
Sbjct: 180 TICLHVERELYPKEMKGKRVVVTSGPTYEQIDPIRFISNKSSGRMGLEIALEFWRRGADV 239
Query: 239 TLIRTRGSVKSFVE-NQIEVETVEEMLGAIEEELTKKKYDVVIMAAAVSDFKPKIKAKEK 297
+ ++ S S +I V +VE+M+ A+ E+ K D+ + +AA +DF +AK K
Sbjct: 240 VHVTSKPSGMSLPNYKEIRVWSVEDMMKAVLYEI-GKGCDLFVSSAAAADFIVDAEAK-K 297
Query: 298 IKSDKSITLELVPNPKIIRKIKEIQSDVFLVGFKAETSM--EKLISEAKKQIESAGSDLV 355
IK+ + L+L +PKII+++++I S ++GFKAET M ++L+ A +++ ++V
Sbjct: 298 IKTAPELVLKLKESPKIIKEVRKIYSG-HIIGFKAETGMSDDELLKVASEKMADDNLNMV 356
Query: 356 IGNTL--EAFGSEESKVVIV---GKDFVKELPRMKKRELAERI 393
+ N + G+E+++V+I+ +++V+ L K+ +AERI
Sbjct: 357 VANDVLERGMGTEDTRVLILTPKRQEWVEGL----KQHVAERI 395
>pir||D69029 pantothenate metabolism flavoprotein dfp homolog MTH1216 -
Methanobacterium thermoautotrophicum (strain Delta H)
>gi|2622326|gb|AAB85705.1| (AE000889) pantothenate
metabolism flavoprotein [Methanobacterium
thermoautotrophicum]
Length = 386
Score = 321 bits (813), Expect = 1e-86
Identities = 187/390 (47%), Positives = 257/390 (64%), Gaps = 21/390 (5%)
Query: 20 KIVLAIPGSIAAVECVKLARELIRHGAEVHAVMSPSATKIIHPYAMEFATGNPVITEITG 79
+I+L + GS+AA+E VKLAREL R GAEV MS A +IIHPYAMEFATG+ + E+TG
Sbjct: 2 EIILCVTGSVAAIEAVKLARELGRQGAEVKCFMSEDACRIIHPYAMEFATGSKPVLELTG 61
Query: 80 SIEHVELAGEHENKADLILVCPATANTISKIACGIDDTPVTTVVTTAFPH-IPIMIAPAM 138
IEHV+ AG ADLILV PATAN I K+A + D P+++++ TA PI++ P+M
Sbjct: 62 EIEHVKYAG-----ADLILVAPATANIIGKLAYRLADNPISSLLLTASGMGTPIVMVPSM 116
Query: 139 HESMYKHPIVRENIEKLKKLGVEFIGPRIEEGKAKVATIDEIVYRVIKKLHPKTLEGKRV 198
HE+MY ENI +LK+ GV FI PR++EGKAK ID IV +++ + L+GKRV
Sbjct: 117 HEAMYA--AAAENIMRLKEEGVIFIEPRMDEGKAKFPDIDTIVLEAMRQTSSQRLQGKRV 174
Query: 199 LITAGATREYIDPIRFITNASSGKMGVALAEEAEFRGAEVTLIRTRGSVKSFVENQI--- 255
L++ G T E IDP+R ITN SSGKMG+A+A A GA+VT++ G+V + Q+
Sbjct: 175 LVSLGGTYEPIDPVRGITNRSSGKMGLAIARRAYIEGADVTVV--AGTVSVEIPPQLRSF 232
Query: 256 EVETVEEMLGAIEEELTKKKYDVVIMAAAVSDFKPKIKAKEKIKSDKSITLELVPNPKII 315
ET EEM + E + +DV I AAAV+DFKP + + KI S + ++EL PNPK+I
Sbjct: 233 RAETAEEMAERVRELVA--DHDVFISAAAVADFKP-VYTERKISSSEEFSVELRPNPKVI 289
Query: 316 RKIKEIQSDVFLVGFKAETSM--EKLISEAKKQIESAGSDLVIGN--TLEAFGSEESKVV 371
+EI + F+VGFKAE + E L+ A+KQI +G D+V+ N ++E FGS+ ++ +
Sbjct: 290 GIAREINPEAFIVGFKAEYDVDNEALVESARKQIRESGVDMVVANDVSVEGFGSDRNRAI 349
Query: 372 IVGKDFVKELPRMKKRELAERIWDEIEKKI 401
IV D V ELP M+K ELA I DE+ +K+
Sbjct: 350 IV-SDMVTELPLMEKEELASIIIDEVIRKV 378
>sp|Q58323|DFP_METJA DNA/PANTOTHENATE METABOLISM FLAVOPROTEIN HOMOLOG
>gi|2129175|pir||A64414 pantothenate metabolism
flavoprotein MJ0913 - Methanococcus jannaschii
>gi|1591587|gb|AAB98918.1| (U67535) pantothenate
metabolism flavoprotein (dfp) [Methanococcus jannaschii]
Length = 403
Score = 269 bits (681), Expect = 3e-71
Identities = 169/403 (41%), Positives = 250/403 (61%), Gaps = 18/403 (4%)
Query: 6 KLIYATKSRKLVGKKIVLAIPGSIAAVECVKLARELIRHGAEVHAVMSPSATKIIHPYAM 65
KL+ TKS+ L KKI++A+ SIAA+E KL RELIRHGAEV+ +++ KII A+
Sbjct: 10 KLLKGTKSKLLENKKILVAVTSSIAAIETPKLMRELIRHGAEVYCIITEETKKIIGKEAL 69
Query: 66 EFATGNPVITEITGSIEHVELAGEHENKADLILVCPATANTISKIACGIDDTPVTTVVTT 125
+F GN V EITG IEH+ L N+ D +L+ PATAN ISKI GI D V T
Sbjct: 70 KFGCGNEVYEEITGDIEHILL----YNECDCLLIYPATANIISKINLGIADNIVNTTALM 125
Query: 126 AFPHIPIMIAPAMHESMYKHPIVRENIEKLK-KLGVEFIGPRIEEGKAKVATIDEIVYRV 184
F + PI I PAMHE+M+ ++ +I+KLK K + I P+ EEGKAKVA I+++V V
Sbjct: 126 FFGNKPIFIVPAMHENMFN--AIKRHIDKLKEKDKIYIISPKFEEGKAKVANIEDVVKAV 183
Query: 185 IKKL-HPKTLEGKRVLITAGATREYIDPIRFITNASSGKMGVALAEEAEFRGAEVTLIRT 243
I+K+ + EG RVLI G T E+ID +R I+N SSGKMGVALAE G V +I
Sbjct: 184 IEKIGNNLKKEGNRVLILNGGTVEFIDKVRVISNLSSGKMGVALAEAFCKEGFYVEVITA 243
Query: 244 RGSVKSFVENQIEVETVEEMLG-AIEEELTKKKYDVVIMAAAVSDFKPKIKAKEKIKSDK 302
G + +V T +EML AIE K +D++I +AA+SDF + + K+ S++
Sbjct: 244 MGLEPPYYIKNHKVLTAKEMLNKAIE---LAKDFDIIISSAAISDFTVE-SFEGKLSSEE 299
Query: 303 SITLELVPNPKIIRKIKEIQSDVFLVGFKAETSME--KLISEAKKQIESAGSDLVIGNTL 360
+ L+L NPK++ +++ I D ++GFKAE +++ +LI+ AK+++ +++I N L
Sbjct: 300 ELILKLKRNPKVLEELRRIYKDKVIIGFKAEYNLDEKELINRAKERLNKYNLNMIIANDL 359
Query: 361 EA--FGSEESKVVIVGKDFVKELPRMKKRELAERIWDEIEKKI 401
FG + +V I+ K V+++ KK E++ERI ++++K +
Sbjct: 360 SKHYFGDDYIEVYIITKYEVEKISGSKK-EISERIVEKVKKLV 401
>gb|AAK40553.1| DNA/pantothenate metabolism flavoprotein (dfp) [Sulfolobus
solfataricus]
Length = 413
Score = 269 bits (680), Expect = 4e-71
Identities = 163/408 (39%), Positives = 254/408 (61%), Gaps = 18/408 (4%)
Query: 6 KLIYATKSRKLVGKKIVLAIPGSIAAVECVKLARELIRHGAEVHAVMSPSATKIIHPYAM 65
K I + S +L KKI+LA+ GS+A + + LAR L+R+GAEV ++S A K+I P
Sbjct: 10 KKIIGSISNELADKKILLAVTGSVAIYKSLDLARSLMRNGAEVSVIISKDAAKLISPEMF 69
Query: 66 EFATGNPVITEITGSIEHVELAGEHENKADLILVCPATANTISKIACGIDDTPVT-TVVT 124
++ATGN V+T++TG +EHV LA ++ D+++V P+TANT+ KIA GI DTP+T T +
Sbjct: 70 KWATGNNVVTKLTGDLEHVSLAEDN----DVMIVAPSTANTMVKIAYGIADTPITATALN 125
Query: 125 TAFPHIPIMIAPAMHESMYKHPIVRENIEKLKKLGVEFIGPRIEEGKAKVATIDEIVYRV 184
P++I P+MH MY P V + ++LK++GVE I P I A ++ + R+
Sbjct: 126 FVGMKKPLIIVPSMHLQMYISPQVADAADRLKRIGVEVIEPEIVGDLAHYPKLEYLTSRI 185
Query: 185 IK-KLHPKTLEGKRVLITAGATREYIDPIRFITNASSGKMGVALAEEAEFRGAEVTLI-- 241
L K L G +L TAG TREY+D +RFI+N SSG MG+++A EA FRGA+V +I
Sbjct: 186 TSYVLRGKDLSGFNILATAGPTREYLDSVRFISNPSSGTMGISIANEAYFRGAKVRVICG 245
Query: 242 RTRGSVKSFVENQIEVETVEEMLGAIEEELTKKKYDVVIMAAAVSDFKPKIKAKEKIKSD 301
++ +V++ + VET EEML + + + K++VVI+A A +D+K K K+ KI S
Sbjct: 246 PISSKIEPYVKDIVYVETTEEMLNEVVKSIENGKFNVVILAGAPADYKFKNKSDTKIDSH 305
Query: 302 KSI-TLELVPNPKIIRKIKEIQSDVFLVGFKAET--SMEKLISEAKKQIESAGSDLVIGN 358
I +EL PKI I++ +V LVGF AET S E+LI +AK ++ G DL++ N
Sbjct: 306 TEIPKVELERTPKISEYIRKY--NVLLVGFSAETVNSDEELIEKAKIKMRRHGFDLIVAN 363
Query: 359 TLE----AFGSEESKVVIVGKD-FVKELPRMKKRELAERIWDEIEKKI 401
+ F SE ++V+++ K+ V+++P+ K +A +I D +++++
Sbjct: 364 NVRRKDIGFSSEYNEVIVIDKNGDVRKIPKNFKTVIARKILDIVKEQL 411
>gb|AAG19087.1| (AE005007) pantothenate metabolism flavoprotein; Dfp [Halobacterium
sp. NRC-1]
Length = 392
Score = 266 bits (672), Expect = 4e-70
Identities = 156/392 (39%), Positives = 233/392 (58%), Gaps = 19/392 (4%)
Query: 16 LVGKKIVLAIPGSIAAVECVKLARELIRHGAEVHAVMSPSATKIIHPYAMEFATGNPVIT 75
L G + + + GSIAAV+ V+ EL R GA V AVM+ SA IIHP+A+EFAT NPV+T
Sbjct: 2 LSGVNVAVGVTGSIAAVKVVEFVHELRRRGACVRAVMTESAQGIIHPWAVEFATENPVVT 61
Query: 76 EITGSIEHVELAGEHENKADLILVCPATANTISKIACGIDDTPVTTVVTTAF-PHIPIMI 134
EITG++ HVEL G + AD+ +V PATANT+ KIA +DD+PVTT VTTA +P+++
Sbjct: 62 EITGTVPHVELCGR-DGWADVFVVAPATANTVGKIAAAVDDSPVTTCVTTAVGADVPVVV 120
Query: 135 APAMHESMYKHPIVRENIEKLKKLGVEFIGPRIEEGKAKVATIDEIVYRVIKKLHPKTLE 194
PAMHE MY HP VR+ I+++ GV + PRIEEGKAK+ IV+ + + L
Sbjct: 121 VPAMHEPMYDHPGVRDAIDRVSSWGVSVVDPRIEEGKAKLPRESTIVHETARAAGEQPLA 180
Query: 195 GKRVLITAGATREYIDPIRFITNASSGKMGVALAEEAEFRGAEVTLIR--TRGSVKSFVE 252
G V++T+GAT E IDP+R +TN +SG+ G A+A RGA VTL+ + G + +
Sbjct: 181 GTHVVVTSGATSEAIDPVRVLTNRASGRTGRAVAAACYVRGARVTLVHDASDGGAVPYAD 240
Query: 253 NQIEVETVEEMLGAIEEELTKKKYDVVIMAAAVSDFKPKIKAKEKIKSDK-SITLELVPN 311
+ +V + EM A D ++ AAA+SD+ + A EK++S + + L L P
Sbjct: 241 VR-DVSSAAEMTAATLTACADA--DALVSAAAISDYTVE-AADEKLRSGREDVALSLEPT 296
Query: 312 PKIIRKIKEIQSDVFLVGFKAETSM-------EKLISEAKKQIESAGSDLVIGNTLEAFG 364
K++ +++ D+ +VGFKAET + +++ A+ ++ G V+ N G
Sbjct: 297 RKLVGAVRDDNPDLPIVGFKAETPADDGTAGDDSMVAAARSLLQRDGLAFVVANDAGVMG 356
Query: 365 SEESKVVIVGKDFVKELPRMKK---RELAERI 393
++E++ + V D V E K+ +AER+
Sbjct: 357 NDETRALFVTADSVSEYAGHKRGLGARIAERL 388
>pir||B70371 pantothenate metabolism flavoprotein dfp - Aquifex aeolicus
>gi|2983357|gb|AAC06944.1| (AE000708) pantothenate
metabolism flavoprotein [Aquifex aeolicus]
Length = 388
Score = 237 bits (598), Expect = 2e-61
Identities = 148/383 (38%), Positives = 221/383 (57%), Gaps = 20/383 (5%)
Query: 21 IVLAIPGSIAAVECVKLARELIRHGAEVHAVMSPSATKIIHPYAMEFATGNPVITEITGS 80
I++ + G IA+ + +L REL R G V +++P A K + P + +GN T+
Sbjct: 3 ILIGVCGGIASYKVCELVRELKRKGHSVKTILTPFAEKFMSPLTFQTLSGNKAYTDKDWE 62
Query: 81 IE---HVELAGEHENKADLILVCPATANTISKIACGIDDTPVTTVVTTAFPHIPIMIAPA 137
E H+ LA AD+ L+ PATANTI+KIA GI D +TT + P+++APA
Sbjct: 63 EEPLAHINLA----RWADVFLIAPATANTIAKIANGISDNLLTTTILAYGK--PLLVAPA 116
Query: 138 MHESMYKHPIVRENIEKLKKLGVEFIGPRI------EEGKAKVATIDEIVYRVIKKLHPK 191
M+ MYK P +EN++KLK+ G I P E G+ K+A+ID ++ + K
Sbjct: 117 MNTVMYKSPSTQENLKKLKEWGHVIIEPEFGVLACKEVGEGKLASIDRLIDWIYYVSEEK 176
Query: 192 TLEGKRVLITAGATREYIDPIRFITNASSGKMGVALAEEAEFRGAEVTLIRTRGSVKSFV 251
L+GK+VLIT GAT+E+IDP+RFI+N SSG+MG +LA ++GAEV +I + K
Sbjct: 177 PLKGKKVLITCGATKEFIDPVRFISNYSSGEMGFSLARIFRWKGAEVKVIAGTTTAKEPP 236
Query: 252 ENQ-IEVETVEEMLGAIEEELTKKKYDVVIMAAAVSDFKPKIKAKEKIKSDKSITLELVP 310
E + I V+T EEM + E D+V+M AAV+DFKP +KEKIK I LELV
Sbjct: 237 EVEIIRVQTTEEMREKVLEHYDWA--DIVVMNAAVADFKPSKVSKEKIKKRDKILLELVK 294
Query: 311 NPKIIRKIKEIQSDVFLVGFKAETSMEKLISEAKKQIESAGSDLVIGNTLEAFGSEESKV 370
NP I+ ++ + LVGF E+ + L+ A++++E DL++ N ++ G +E +
Sbjct: 295 NPDILEELGRKKGYKILVGFALES--DNLLEYAREKLERKNLDLIVANPVKVMGKKEHEG 352
Query: 371 VIVGKDFVKELPRMKKRELAERI 393
++ KD + ELP+ K E A I
Sbjct: 353 YLITKDQIVELPKGSKLENARFI 375
>sp|O51752|DFP_BORBU DNA/PANTOTHENATE METABOLISM FLAVOPROTEIN HOMOLOG
>gi|7449264|pir||C70201 pantothenate metabolism
flavoprotein dfp homolog BB0812 - Lyme disease
spirochete >gi|2688739|gb|AAC67145.1| (AE001179)
pantothenate metabolism flavoprotein (dfp) [Borrelia
burgdorferi]
Length = 390
Score = 226 bits (570), Expect = 4e-58
Identities = 150/391 (38%), Positives = 232/391 (58%), Gaps = 26/391 (6%)
Query: 19 KKIVLAIPGSIAAVECVKLARELIRHGAEVHAVMSPSATKIIHPYAMEFATGNPVITEIT 78
K I++ I G IA+ + V + L++ G +V +M+ +ATK I P +E + N +IT +
Sbjct: 5 KHILIGICGGIASYKSVYIVSSLVKLGYKVKVIMTQNATKFITPLTLETISKNKIITNLW 64
Query: 79 ----GSIEHVELAGEHENKADLILVCPATANTISKIACGIDDTPVTTVVTTAFPHIPIMI 134
+EH+++A A LILV PAT NTISKIA GI D +TT+++ + P
Sbjct: 65 DLDHNEVEHIKIA----KWAHLILVIPATYNTISKIASGIADDALTTIISASTA--PTYF 118
Query: 135 APAMHESMYKHPIVRENIEKLKKLGVEFIGPR------IEEGKAKVATIDEIVYRVIKKL 188
A AM+ MY +PI++ENI+KLK +FI P ++ D+I+ ++ +
Sbjct: 119 AIAMNNIMYSNPILKENIKKLKTYNYKFIEPDKGFLACSSNALGRLKNEDKIIKIILNEF 178
Query: 189 HPKT-LEGKRVLITAGATREYIDPIRFITNASSGKMGVALAEEAEFRGAEVTLIRTRGSV 247
+ K L+ K++LITA T E IDPIR+ +N S+GKMG LA+EA GA+VT+I T +
Sbjct: 179 NQKDYLKNKKILITASRTEELIDPIRYFSNTSTGKMGFCLAQEAVKLGAQVTII-TGPTN 237
Query: 248 KSFVE--NQIEVETVEEMLGAIEEELTKKKYDVVIMAAAVSDFKPKIKAKEKIKSDK--S 303
++ E N I+++T EM E K++++I AAAV+DFKPK KIK +K
Sbjct: 238 ENDPEGVNIIKIKTAMEMYK--EALKIYNKFEIIIGAAAVADFKPKHIFNSKIKKNKINR 295
Query: 304 ITLELVPNPKIIRKIKEIQ-SDVFLVGFKAETSMEKLISEAKKQIESAGSDLVIGNTLEA 362
+ ++LV NP II+ I + + ++GF AE S + LI +AK++++ D +I N L+
Sbjct: 296 LYIKLVKNPDIIQHIGHNKLKNQIVIGFCAENS-KNLIQKAKEKLKKKNLDFIIANELKY 354
Query: 363 FGSEESKVVIVGKDFVKELPRMKKRELAERI 393
FGS+ +KV I+ K +KELP M+K E+A+ I
Sbjct: 355 FGSKLNKVYIINKQSIKELPEMEKSEVAKEI 385
>pir||A72498 probable DNA/pantothenate metabolism flavoprotein APE1959 -
Aeropyrum pernix (strain K1) >gi|5105657|dbj|BAA80969.1|
(AP000063) 437aa long hypothetical DNA/pantothenate
metabolism flavoprotein [Aeropyrum pernix]
Length = 437
Score = 224 bits (565), Expect = 1e-57
Identities = 145/393 (36%), Positives = 219/393 (54%), Gaps = 17/393 (4%)
Query: 18 GKKIVLAIPGSIAAVECVKLARELIRHGAEVHAVMSPSATKIIHPYAMEFATGNPVITEI 77
GK IVL + S+A + LAR L+R GA V VM+P A K++ P +A+G PV T
Sbjct: 47 GKTIVLGVTASVALYRSLDLARWLLRRGARVITVMTPEAAKLVSPEMFHWASGGPVYTGF 106
Query: 78 TGSIEHVELAGEHENKADLILVCPATANTISKIACGIDDTPVTTVVTTAFPH-IPIMIAP 136
TG +EH+ +A A ++V PAT +T++KIA G+ D PV + + P++ P
Sbjct: 107 TGGVEHISIA----RAASAMVVAPATLSTLAKIAHGVVDNPVALAAVSIMGYGKPVIAVP 162
Query: 137 AMHESMYKHPIVRENIEKLKKLGVEFIGPRIEEGKAKVATIDEI--VYRVIKKLHPKTLE 194
AMH +MY+ P RE +++L+ GV + P+IE G AK + + + + LE
Sbjct: 163 AMHGNMYESPQAREVVDRLRSQGVLVVDPKIEGGVAKYPDTHAVGRITAAQARKGLRDLE 222
Query: 195 GKRVLITAGATREYIDPIRFITNASSGKMGVALAEEAEFRGAEVTLIRTRGSVK-SFVEN 253
G R L+T G+TRE+ID +RFI+N SSG MG+ A E RGAEV ++ SV+ + N
Sbjct: 223 GIRALVTLGSTREWIDRVRFISNPSSGVMGLEAALELYARGAEVDVVAGYTSVEIPHLFN 282
Query: 254 QIEVETVEEMLGAIEEELTKKKYDVVIMAAAVSDFKPKIKAKEKIKSDKSITLELVPNPK 313
++ ET E+M A+EE +K++YD V+ AAA DF+P + KI+S + + LEL P PK
Sbjct: 283 TVKTETTEDMAAAVEELTSKREYDAVVAAAAPVDFRPAGAFEGKIRSGQRLVLELEPTPK 342
Query: 314 IIRKIKEIQSDVFLVGFKAE--TSMEKLISEAKKQIESAGSDLVIGNTL----EAFGSEE 367
++ I + LV F AE +++ L A +++E +DLV+ N + F S
Sbjct: 343 VLEGI--ARRPKVLVAFAAEYVDNLDSLRDPALEKMEKYDADLVVANRVGVEGVGFASPL 400
Query: 368 SKVVIVGKDFVKELPRMKKREL-AERIWDEIEK 399
V+++ K L +E+ A I DEI K
Sbjct: 401 LDVLMLDKSGEAVLKGSFHKEIVAAVIADEIAK 433
>pir||A82351 DNA/pantothenate metabolism flavoprotein VC0215 [imported] - Vibrio
cholerae (group O1 strain N16961)
>gi|9654622|gb|AAF93391.1| (AE004111) DNA/pantothenate
metabolism flavoprotein [Vibrio cholerae]
Length = 399
Score = 217 bits (546), Expect = 2e-55
Identities = 143/408 (35%), Positives = 230/408 (56%), Gaps = 30/408 (7%)
Query: 14 RKLVGKKIVLAIPGSIAAVECVKLARELIRHGAEVHAVMSPSATKIIHPYAMEFATGNPV 73
+ L GKKI+L I G IAA +C +L R L+ GA V VM+ +A + I P M+ +G PV
Sbjct: 2 QSLAGKKILLGISGGIAAYKCAELTRRLVERGATVQVVMTHAAKEFITPLTMQAVSGRPV 61
Query: 74 ITEIT-----GSIEHVELAGEHENKADLILVCPATANTISKIACGIDDTPVTTVVTTAFP 128
+ S+ H+ELA ADL+L+ PATA+ I+++A G+ + +TT++
Sbjct: 62 SDSLLDPAAEASMGHIELA----KWADLVLLAPATADLIARMAAGMGNDLLTTLILAT-- 115
Query: 129 HIPIMIAPAMHESMYKHPIVRENIEKLKKLGVEFIGPRIEE------GKAKVATIDEIVY 182
P+ IAPAM++ MY++ +EN++ L + G GP E G ++ E+V
Sbjct: 116 SAPVAIAPAMNQQMYRNIATQENLQTLIRRGYLTWGPAAGEQACGDVGPGRMLEPMELVA 175
Query: 183 RVIKKLHPKTLEGKRVLITAGATREYIDPIRFITNASSGKMGVALAEEAEFRGAEVTLIR 242
PK L GKRVLITAG TRE +DP+R+ITN SSGKMG ALA+ A GA+VTL+
Sbjct: 176 HCENFFAPKILVGKRVLITAGPTREALDPVRYITNHSSGKMGFALAKAAAQLGADVTLVS 235
Query: 243 TRGSVKSFV-ENQIEVETVEEMLGAIEEELTKKKYDVVIMAAAVSDFKPKIKAKEKIKSD 301
+ + V N+I+V++ EM A+ +E T + + I AAV+D++P+ A++KIK
Sbjct: 236 GPVHLPTPVGVNRIDVQSGLEMHSAVMKEAT--SHQIFIACAAVADYRPQTVAEQKIKKS 293
Query: 302 K---SITLELVPNPKIIRKIKEI-QSDVFLVGFKAETSMEKLISEAKKQIESAGSDLVIG 357
+ ++T+E+V NP I+ + + ++ F VGF AET + + + A+ ++ D++
Sbjct: 294 RDNDTLTIEMVKNPDIVASVAALTENRPFTVGFAAET--QDVETYARSKLVRKNLDMICA 351
Query: 358 NTL----EAFGSEESKVVIVGKDFVKELPRMKKRELAERIWDEIEKKI 401
N + + F S ++ + + K+ LP K LA + I +++
Sbjct: 352 NDVSIAGQGFNSNDNALTLFWKEGQHSLPLTSKDALASAVMHLIHEQM 399
>pir||A72223 pantothenate metabolism flavoprotein dfp homolog TM1687 -
Thermotoga maritima (strain MSB8)
>gi|4982263|gb|AAD36754.1|AE001809_6 (AE001809)
DNA/pantothenate metabolism flavoprotein [Thermotoga
maritima]
Length = 394
Score = 211 bits (532), Expect = 1e-53
Identities = 153/396 (38%), Positives = 222/396 (55%), Gaps = 30/396 (7%)
Query: 20 KIVLAIPGSIAAVECVKLARELIRHGAEVHAVMSPSATKIIHPYAMEFATGNPVITEI-- 77
+IVL + IA + V LA +L + G E+H VM+P AT++I P A GN +
Sbjct: 2 RIVLGVSSGIAIYKAVDLASKLRKEGHELHVVMTPDATRMISPVVFS-AVGNCSVYHDWM 60
Query: 78 ---TGSIEHVELAGEHENKADLILVCPATANTISKIACGIDDTPVTTVVTTAFPHIPIMI 134
G I H E++ AD+++V PATANTISKIA GI D + T+V AF ++
Sbjct: 61 DVRNGWIPHTEIS----RTADVLVVAPATANTISKIANGIADN-LLTLVALAFDKDAKIL 115
Query: 135 APAMHESMYKHPIVRENIEKLKKLGVEFIGPRI------EEGKAKVATIDEIVYRVIKKL 188
P M+ MY + + +EN+EKLK G + P E GK + ++IV V
Sbjct: 116 VPTMNYRMYSNKLFQENLEKLKNNGWFVVEPEEGHLACGEVGKGRYPENEKIVEAVHLLT 175
Query: 189 HPKTLEGKRVLITAGATREYIDPIRFITNASSGKMGVALAEEAEFRGAEVTLIRTRGSVK 248
PK L GK+VLITAG TRE ID +RFITNASSGKMG ALA A+ GA V+L+ S+K
Sbjct: 176 FPKKLAGKKVLITAGPTRERIDAVRFITNASSGKMGYALATVAKRMGARVSLVSGPTSLK 235
Query: 249 S--FVENQIEVETVEEMLGAIEEELTKK--KYDVVIMAAAVSDFKPKIKAKEKI-KSDKS 303
+V+ ++VE+ EEM EE+ K+ D+VIM AAV D++PK + K+ K++
Sbjct: 236 PPYYVDEFVKVESAEEMY----EEVMKRFEDTDIVIMNAAVGDYRPKKVFEGKLKKTEND 291
Query: 304 ITLELVPNPKIIRKIKEIQSDVFLVGFKAETSMEKLISEAKKQIESAGSD-LVIGNTLEA 362
+ L L I++++ + +S+ LVGF AE +E A K++ D LV+ + +A
Sbjct: 292 LVLHLERTKDILKELGQRKSNQILVGFAAE--VENFEENAVKKLREKNLDLLVLNDARKA 349
Query: 363 FGSEESKVVIVGKD-FVKELPRMKKRELAERIWDEI 397
F S+ +V I G+D F+K + K +A I D +
Sbjct: 350 FSSDRVEVYIYGRDGFIKRIDEDDKIRVACGILDVV 385
>pir||D81819 hypothetical protein NMA1916 [imported] - Neisseria meningitidis
(group A strain Z2491) >gi|7380550|emb|CAB85137.1|
(AL162757) hypothetical protein [Neisseria meningitidis
Z2491]
Length = 394
Score = 208 bits (525), Expect = 7e-53
Identities = 140/398 (35%), Positives = 218/398 (54%), Gaps = 27/398 (6%)
Query: 17 VGKKIVLAIPGSIAAVECVKLARELIRHGAEVHAVMSPSATKIIHPYAMEFATGNPVITE 76
+GK I+L + GSIAA + +L R L + G V VMS SAT+ + P + +GNPV+T+
Sbjct: 1 MGKHILLGVTGSIAAYKSCELVRLLKKQGHSVTVVMSRSATEFVSPLTFQALSGNPVLTD 60
Query: 77 ITGS-----IEHVELAGEHENKADLILVCPATANTISKIACGIDDTPVTTVVTTAFPHIP 131
GS +EH+ L AD+ L+ PA+ NT++KI G+ D +T + A P
Sbjct: 61 THGSNGSNGMEHINLT----RNADVFLIAPASMNTVAKICNGVADNLLTNLA--AARKCP 114
Query: 132 IMIAPAMHESMYKHPIVRENIEKLKKLGVEFIGPRI------EEGKAKVATIDEIVYRVI 185
+ IAPAM+ M+ +P + NI +L G+ P + E G ++ E++ +
Sbjct: 115 LAIAPAMNVEMWLNPANQRNIAQLVSDGITVYMPGLGEQACGENGMGRMPEPAELLDLLP 174
Query: 186 KKLHPKTLEGKRVLITAGATREYIDPIRFITNASSGKMGVALAEEAEFRGAEVTLI--RT 243
PK L GK++LITAGAT E IDP+R ITN SSGKMGVALA GAEV+LI +
Sbjct: 175 DLWTPKILRGKKILITAGATFEAIDPVRGITNTSSGKMGVALARACRAAGAEVSLIHGQL 234
Query: 244 RGSVKSFVENQIEVETVEEMLGAIEEELTKKKYDVVIMAAAVSDFKPKIKAKEKIKSDKS 303
+ + + + ++ + E+M A+ + +K D I AAVSD+K K ++ +K K DK+
Sbjct: 235 QTELPFGISDTVQAVSAEDMHRAVHRLI--EKQDAFISVAAVSDYKVKNRSTQKFKKDKN 292
Query: 304 ---ITLELVPNPKIIRKIKEIQSDVFLVGFKAETSMEKLISEAK-KQIESAGSDLVIGNT 359
+++EL NP I+ I + + F +GF AET E +++ A+ K+I+ +V +
Sbjct: 293 AKPLSIELDENPDILASIASLPNPPFCIGFAAET--ENVMAYAREKRIKKKIPVIVANDV 350
Query: 360 LEAFGSEESKVVIVGKDFVKELPRMKKRELAERIWDEI 397
A G +++ I+G D P K E A +I + +
Sbjct: 351 SIAMGKPTNRITIIGDDGELSFPETSKDEAAMQIVERL 388
>pir||A81058 DNA/pantothenate metabolism flavoprotein NMB1658 [imported] -
Neisseria meningitidis (group B strain MD58)
>gi|7226910|gb|AAF42007.1| (AE002516) DNA/pantothenate
metabolism flavoprotein [Neisseria meningitidis MC58]
Length = 394
Score = 208 bits (524), Expect = 9e-53
Identities = 138/398 (34%), Positives = 219/398 (54%), Gaps = 27/398 (6%)
Query: 17 VGKKIVLAIPGSIAAVECVKLARELIRHGAEVHAVMSPSATKIIHPYAMEFATGNPVITE 76
+GK I+L + GSIAA + +L R L + G V VMS SAT+ + P + +GNPV+T+
Sbjct: 1 MGKHILLGVTGSIAAYKSCELVRLLKKQGHSVTVVMSRSATEFVSPLTFQALSGNPVLTD 60
Query: 77 ITGS-----IEHVELAGEHENKADLILVCPATANTISKIACGIDDTPVTTVVTTAFPHIP 131
G +EH+ L AD+ L+ PA+ NT++KI G+ D +T++ A P
Sbjct: 61 THGGNGSNGMEHINLT----RNADVFLIAPASMNTVAKICNGVADNLLTSLA--AARKCP 114
Query: 132 IMIAPAMHESMYKHPIVRENIEKLKKLGVEFIGPRI------EEGKAKVATIDEIVYRVI 185
+ IAPAM+ M+ +P + NI +L G+ P + E G ++ E++ +
Sbjct: 115 LAIAPAMNVEMWLNPANQRNIAQLVSDGITVYMPGLGEQACGENGMGRMPEPAELLDLLP 174
Query: 186 KKLHPKTLEGKRVLITAGATREYIDPIRFITNASSGKMGVALAEEAEFRGAEVTLI--RT 243
PK L+GK+VLITAGAT E IDP+R ITN SSGKMGVALA GAEV+LI +
Sbjct: 175 DLWTPKILKGKKVLITAGATFEAIDPVRGITNISSGKMGVALARACRAAGAEVSLIHGQL 234
Query: 244 RGSVKSFVENQIEVETVEEMLGAIEEELTKKKYDVVIMAAAVSDFKPKIKAKEKIKSDKS 303
+ ++ + + ++ + E M A+ + K+ D I AAVSD++ K ++ +K K DK+
Sbjct: 235 QTALPFGISDTVQAVSAENMHRAVHRLIDKQ--DAFISVAAVSDYRVKNRSTQKFKKDKN 292
Query: 304 ---ITLELVPNPKIIRKIKEIQSDVFLVGFKAETSMEKLISEAKKQIESAGSDLVIGNTL 360
+++EL NP I+ I + + F +GF AET E +++ A+++ +++ N +
Sbjct: 293 AKPLSIELDENPDILASIASLPNPPFCIGFAAET--ENVMTYAREKRIKKKLPMIVANDV 350
Query: 361 E-AFGSEESKVVIVGKDFVKELPRMKKRELAERIWDEI 397
A G +++ I+G D P K E A RI + +
Sbjct: 351 SIAMGKPTNRITIIGDDGELSFPETSKDEAAMRIVERL 388
>dbj|BAB06229.1| (AP001515) flavoprotein [Bacillus halodurans]
Length = 404
Score = 205 bits (515), Expect = 1e-51
Identities = 136/398 (34%), Positives = 225/398 (56%), Gaps = 30/398 (7%)
Query: 16 LVGKKIVLAIPGSIAAVECVKLARELIRHGAEVHAVMSPSATKIIHPYAMEFATGNPVIT 75
L GK++VL + G IAA + A +L++ GAEV VM+ A K + P + T +PV
Sbjct: 2 LQGKRVVLGVSGGIAAFKSAAFASKLVQAGAEVKVVMTEGAKKFVTPLTFQALTRHPVYD 61
Query: 76 EI-----TGSIEHVELAGEHENKADLILVCPATANTISKIACGIDDTPVTTVVTTAFPHI 130
+ I H++LA + AD+I++ PATAN I K+A G+ D ++T++
Sbjct: 62 DTFSEPDPSEIAHIQLA----DWADVIIIAPATANLIGKLANGVADDMLSTMLLAT--KA 115
Query: 131 PIMIAPAMHESMYKHPIVRENIEKLKKLGVEFIGPRIEE------GKAKVATIDEIVYRV 184
PI +APAM+ +MY+HP V+ N+++L K G + P GK ++ ++++ +
Sbjct: 116 PIYLAPAMNVNMYEHPAVQRNMQQLAKDGYRLLEPGAGYLACGWIGKGRMPEPEDLLKTI 175
Query: 185 IKKLHP--KTLEGKRVLITAGATREYIDPIRFITNASSGKMGVALAEEAEFRGAEVTLIR 242
P +L GK+++ITAG T+E IDPIRF TN SSGKMG AL + A G VTLI
Sbjct: 176 EVHFTPPSSSLAGKKIVITAGPTQETIDPIRFFTNRSSGKMGYALTKAARDFGGNVTLIS 235
Query: 243 TRGSV-KSFVENQIEVETVEEMLGAIEEELTKKKYDVVIMAAAVSDFKPKIKAKEKI-KS 300
S+ K + + V++ ++M A+ E + DVVI AAV+D++P++ ++K+ K
Sbjct: 236 GPTSLEKPDGVSVVNVKSAQDMYEAVLAEFSDA--DVVIKTAAVADYRPRVVHEQKVKKK 293
Query: 301 DKSITLELVPNPKIIRKIKEIQSDVFLVGFKAETSMEKLISEAKKQIESAGSDLVIGNTL 360
D +EL I++ + E + FLVGF AE+ +++ + A+K+++ +D+++ N +
Sbjct: 294 DGDWVIELERTVDILKTLGEKKESQFLVGFAAES--QEVETYAQKKLKEKNADMIVANNV 351
Query: 361 ----EAFGSEESKVVIVGKD-FVKELPRMKKRELAERI 393
F ++ ++V + K VK LP M K E+A R+
Sbjct: 352 TEEGAGFQTDTNRVTVYFKQGDVKPLPLMTKDEVAHRL 389
>gb|AAF04763.1| (AF104227) pantothenate metabolism flavoprotein homolog [Listeria
monocytogenes]
Length = 399
Score = 201 bits (506), Expect = 1e-50
Identities = 146/403 (36%), Positives = 220/403 (54%), Gaps = 37/403 (9%)
Query: 18 GKKIVLAIPGSIAAVECVKLARELIRHGAEVHAVMSPSATKIIHPYAMEFATGNPVITEI 77
GK I+LA+ G IA + V L +L + GA V +M+ A + + P + + + N V T+
Sbjct: 3 GKNILLAVSGGIAVYKAVALTSKLTQAGANVKVMMTAHAQEFVPPLSFQVLSKNDVYTDT 62
Query: 78 -----TGSIEHVELAGEHENKADLILVCPATANTISKIACGIDDTPVTTVVTTAFPHIPI 132
+ + H++LA + ADL++V PATAN I K+A GI D VTT + P+
Sbjct: 63 FDEKKSSVVAHIDLA----DWADLVIVAPATANVIGKMANGIADDMVTTTILAT--EAPV 116
Query: 133 MIAPAMHESMYKHPIVRENIEKLKKLGVEFIGPRIEEG--------KAKVATIDEIVYRV 184
+APAM+ M +HP V NI +L GV FI P EEG + ++ ++IV R+
Sbjct: 117 WVAPAMNVHMIQHPAVIRNINRLYADGVRFIEP--EEGYLACGYVGRGRLEEPEKIVLRI 174
Query: 185 IKKLHP--KTLEGKRVLITAGATREYIDPIRFITNASSGKMGVALAEEAEFRGAEVTLIR 242
+ L+GK VL+TAGATRE +D IR+ TN S+GKMG ++AE A GA VTLI
Sbjct: 175 AEFFQEDKNLLQGKNVLVTAGATREKLDLIRYFTNHSTGKMGFSIAESAARHGANVTLIT 234
Query: 243 TRGS--VKSFVENQIEVETVEEMLGAIEEELTKKKYDVVIMAAAVSDFKPKIKAKEKIKS 300
T + V VE I VE+ EEM A+ E K D+ +M AAV+D+ P + +KIK
Sbjct: 235 TSKALPVPHGVE-AIYVESAEEMHQAVNER--KVSQDIFVMTAAVADYTPAQVSDQKIKK 291
Query: 301 DK-SITLELVPNPKIIRKIKEIQ-SDVFLVGFKAETSMEKLISEAKKQIESAGSDLVIGN 358
T+ + I+ +I + + S+ ++GF AET E + + A+K++ S +D+++ N
Sbjct: 292 QPGDFTIAMKRTKDILLEIGQHKTSEQVVIGFAAET--ENVEANARKKLTSKNADMIVAN 349
Query: 359 TLE----AFGSEESKVVIVGKDFVKE-LPRMKKRELAERIWDE 396
+ F + + V KD E LP + K+E+AE I E
Sbjct: 350 NISEAGAGFSGDTNIVTFYRKDGSSEALPILDKKEVAEHIIKE 392
>pir||B82982 DNA/pantothenate metabolism flavoprotein PA5320 [imported] -
Pseudomonas aeruginosa (strain PAO1)
>gi|9951637|gb|AAG08705.1|AE004944_9 (AE004944)
DNA/pantothenate metabolism flavoprotein [Pseudomonas
aeruginosa]
Length = 402
Score = 198 bits (499), Expect = 7e-50
Identities = 129/385 (33%), Positives = 213/385 (54%), Gaps = 35/385 (9%)
Query: 14 RKLVGKKIVLAIPGSIAAVECVKLARELIRHGAEVHAVMSPSATKIIHPYAMEFATGNPV 73
++L K+IVL + G IAA + +L R L GAEV VM+ + I P ++ +G+PV
Sbjct: 2 QRLYRKRIVLGVGGGIAAYKSAELVRRLRDQGAEVRVVMTQGGREFITPLTLQALSGHPV 61
Query: 74 ITEIT-----GSIEHVELAGEHENKADLILVCPATANTISKIACGIDDTPVTTVVTTAFP 128
T++ ++ H+ELA ADL+L+ PATA+ ++++ G+ + +TT+V
Sbjct: 62 HTDLLDPAAEAAMGHIELA----RWADLVLIAPATADLMARLVQGVANDLLTTLVLAT-- 115
Query: 129 HIPIMIAPAMHESMYKHPIVRENIEKLKKLGVEFIGPRI------EEGKAKVATIDEIVY 182
I +APAM+++M++ + N E L++ G GP + G ++ +E+
Sbjct: 116 DAQIALAPAMNQAMWRDTATQANAELLRQRGFHLFGPAAGSQACGDVGLGRMLEAEELAQ 175
Query: 183 RVIKKLHPKTLEGKRVLITAGATREYIDPIRFITNASSGKMGVALAEEAEFRGAEVTLIR 242
R + L G VLITAG T+E IDP+R+ITN SSGKMG ALAE A GA VTL+
Sbjct: 176 RAADCFQRQALTGVHVLITAGPTQENIDPVRYITNHSSGKMGFALAEAAVEAGARVTLV- 234
Query: 243 TRGSVKSFVEN---QIEVETVEEMLGAIEEELTKKKYDVVIMAAAVSDFKPKIKAKEKIK 299
G V + +++V + +ML A E + D++I +AAV+D++P++ A K+K
Sbjct: 235 -TGPVHLPTPDRVQRVDVVSARDMLAACEAAM---PCDLLIASAAVADYRPEVVAAHKLK 290
Query: 300 SD----KSITLELVPNPKIIRKIKEIQSDVFLVGFKAETSMEKLISEAKKQIESAGSDLV 355
D + + L+LV NP I+ + + + F VGF AET E L+ A ++++ DL+
Sbjct: 291 KDPTSGEGLLLQLVRNPDILATLAQREDRPFSVGFAAET--ENLLDYAARKLKDKNLDLI 348
Query: 356 IGNTLE----AFGSEESKVVIVGKD 376
+ N + F S+E+ + ++ +D
Sbjct: 349 VANDVANPSIGFNSDENAITVIDRD 373
>pir||D69878 pantothenate metabolism flavoprotein dfp homolog yloI - Bacillus
subtilis >gi|2337799|emb|CAA74260.1| (Y13937) putative
Dfp protein [Bacillus subtilis]
>gi|2633942|emb|CAB13443.1| (Z99112) similar to
pantothenate metabolism flavoprotein [Bacillus subtilis]
Length = 406
Score = 196 bits (494), Expect = 3e-49
Identities = 147/408 (36%), Positives = 213/408 (52%), Gaps = 40/408 (9%)
Query: 16 LVGKKIVLAIPGSIAAVECVKLARELIRHGAEVHAVMSPSATKIIHPYAMEFATGNPVIT 75
L + ++L + G IA + L +L++ GA V +M+ SA + + P + + + V T
Sbjct: 2 LNNRNVLLCVSGGIAVYKACALTSKLVQAGANVKVIMTESACRFVSPLTFQALSRHEVYT 61
Query: 76 EI-----TGSIEHVELAGEHENKADLILVCPATANTISKIACGIDDTPVTTVVTTAFPHI 130
+ I H++ A + ADLI+V PATAN I K+A GI D +TT + A
Sbjct: 62 DTFKEQNPSVISHIDAA----DWADLIIVAPATANVIGKLANGIADDMLTTTLLAATA-- 115
Query: 131 PIMIAPAMHESMYKHPIVRENIEKLKKLGVEFIGPRIEE------GKAKVATIDEIVYRV 184
P+ IAPAM+ MY HP V+ NI L + G FI P GK ++ + IV
Sbjct: 116 PVWIAPAMNVHMYDHPAVKRNISVLYQDGYCFIEPSEGYLACGYVGKGRLEEPENIVKLA 175
Query: 185 IKKLHPKT---LEGKRVLITAGATREYIDPIRFITNASSGKMGVALAEEAEFRGAEVTLI 241
K +T LEGK V+ITAG TRE IDP+RF TN S+GKMG ALAE A GA V LI
Sbjct: 176 EKHFAEETSAPLEGKHVVITAGPTREAIDPVRFFTNKSTGKMGYALAEAAVQLGARVILI 235
Query: 242 RTRGS------VKSFVENQIEVETVEEMLGAIEEELTKKKYDVVIMAAAVSDFKPKIKAK 295
S + F+ Q + E +L + D+VI AAV+DF PK
Sbjct: 236 SGPVSLDQPKGLAEFIPVQSAADMREAVLSVYDAS------DIVIKTAAVADFTPKTVFD 289
Query: 296 EKI-KSDKSITLELVPNPKIIRKIKEIQSDVFLVGFKAETSMEKLISEAKKQIESAGSDL 354
K+ K D +TLEL I++++ E + + LVGF AET + + A+K++ + DL
Sbjct: 290 HKMKKQDGGMTLELKRTVDILKELGEKKKEQILVGFAAET--QDIEHYARKKLAAKNLDL 347
Query: 355 VIGNTLEA----FGSEESKVVIVGKD-FVKELPRMKKRELAERIWDEI 397
++ N ++A FG++ + V I KD +ELP M K +++ I EI
Sbjct: 348 IVANDVKANGAGFGADTNIVTIFFKDGHKRELPIMSKLDVSFEILQEI 395
>emb|CAC12018.1| (AL445065) DNA/pantothenate metabolism flavoprotein related protein
[Thermoplasma acidophilum]
Length = 394
Score = 193 bits (485), Expect = 3e-48
Identities = 121/310 (39%), Positives = 183/310 (59%), Gaps = 7/310 (2%)
Query: 13 SRKLVGKKIVLAIPGSIAAVECVKLARELIRHGAEVHAVMSPSATKIIHPYAMEFATGNP 72
SR L G +++A GSI+ L R+L R GA+V MS S+ ++ P M +A+
Sbjct: 10 SRMLEGYTVIVATSGSISIYRIPDLVRDLRREGADVIVGMSQSSAAMVSPEVMRWASERD 69
Query: 73 VITEITGSIEHVELAGEHENKADLILVCPATANTISKIACGIDDTPVTTVVTTAFPH-IP 131
V+TEITG IEH+ L E+ K ++L+ PA+ NT+ K+A GI D+ + + AF H +
Sbjct: 70 VVTEITGRIEHISLFTENREK-KILLIAPASYNTLGKMANGITDSVPSLFFSFAFGHGVK 128
Query: 132 IMIAPAMHESMYKHPIVRENIEKLKKLGVEFIGPRIEEGKAKVATIDEIVYRVIKKLHPK 191
++APAMH SM ++PI NIEKL+ LGV F+ P ++ KAK+ I+ V + +H K
Sbjct: 129 TVVAPAMHRSMMENPINLANIEKLRSLGVNFVDPIYDDEKAKLNGNGAILDGVCRSVH-K 187
Query: 192 TLEGKRVLITAGATREYIDPIRFITNASSGKMGVALAEEAEFRGAE--VTLIRTRGSVKS 249
L GK++LI +G E IDP+R ITNA SG GV LA A GA L T+ +
Sbjct: 188 DLAGKKILIISGRGEEPIDPVRSITNAGSGFTGVWLARNAYRMGASSITYLGNTQFDLPG 247
Query: 250 FVENQIEVETVEEMLGAIEEELTKKKYDVVIMAAAVSDFKPKIKAKEKIKSDKSITLELV 309
+V+ +E T+++ +E+ ++ YD VI+ AA+ DFK ++++K SD+ + + L
Sbjct: 248 YVK-YVEAHTIDDFEKKTMDEI-EEGYDAVIVNAALPDFKVAERSQKKYSSDQPLRITLN 305
Query: 310 PNPKIIRKIK 319
P KII KI+
Sbjct: 306 PREKIIYKIR 315
>sp|P44953|DFP_HAEIN DNA/PANTOTHENATE METABOLISM FLAVOPROTEIN HOMOLOG
>gi|1075104|pir||G64104 pantothenate metabolism
flavoprotein dfp homolog HI0953 - Haemophilus influenzae
(strain Rd KW20) >gi|1573978|gb|AAC22614.1| (U32776)
DNA/pantothenate metabolism flavoprotein (dfp)
[Haemophilus influenzae Rd]
Length = 400
Score = 190 bits (479), Expect = 2e-47
Identities = 139/403 (34%), Positives = 223/403 (54%), Gaps = 32/403 (7%)
Query: 15 KLVGKKIVLAIPGSIAAVECVKLARELIRHGAEVHAVMSPSATKIIHPYAMEFATGNPVI 74
KL GK IV+ I G IAA + ++L R L + AEV V++P+A + + P ++ +GN V
Sbjct: 2 KLNGKHIVVGITGGIAAYKTIELIRLLRKAEAEVRVVLTPAAAEFVTPLTLQAISGNAVS 61
Query: 75 TEITG-----SIEHVELAGEHENKADLILVCPATANTISKIACGIDDTPVTTVVTTAFPH 129
+ ++ H+ELA AD I++ PA+A+ I+++ G+ + ++T+ +
Sbjct: 62 QSLLDPQAELAMGHIELA----KWADAIIIAPASADFIARLTIGMANDLLSTICLAT--N 115
Query: 130 IPIMIAPAMHESMYKHPIVRENIEKLKKLGVEFIGPRI------EEGKAKVATIDEIVYR 183
PI +APAM++ MY I ++N+ L+ G+E IGP + GK +++ +EI
Sbjct: 116 APIFLAPAMNQQMYHQSITQQNLTTLQTRGIELIGPNSGFQACGDMGKGRMSEPEEIFTA 175
Query: 184 VIKKLHPKT-LEGKRVLITAGATREYIDPIRFITNASSGKMGVALAEEAEFRGAEVTLIR 242
+ K L+G V ITAG TRE IDP+R+I+N SSGKMG A+AE RGA VTLI
Sbjct: 176 LSDFFSQKQDLQGLNVSITAGPTREAIDPVRYISNHSSGKMGFAIAEAFAKRGANVTLI- 234
Query: 243 TRGSVKSFVE---NQIEVETVEEMLGAIEEELTKKKYDVVIMAAAVSDFKPKIKAKEKI- 298
G V N+I V + +EM A E K + + I AAV+D++ A++KI
Sbjct: 235 -AGPVNLTTPKNVNRINVISAQEMWQASLESAVKNQ--IFIGCAAVADYRVTEVAEQKIK 291
Query: 299 KSDKSITLELVPNPKIIRKIKEIQSD-VFLVGFKAETSMEKLISEAKKQIESAGSDLVIG 357
KS I+++L+ NP II + +++ F VGF AET + + AK ++E D++
Sbjct: 292 KSGDEISIKLIKNPDIISDVGHLKTHRPFTVGFAAET--QNVDDYAKDKLERKNLDMICA 349
Query: 358 NTL---EAFGSEESKVVIVGKDFVKELPRMKKRELAERIWDEI 397
N + + F ++E+ + + K+ K+L K ELA + +EI
Sbjct: 350 NDVSGGQVFNADENALQLFWKNGHKKLSLKSKVELAADLVNEI 392
>gb|AAD21550.1| (AF088896) pantothenate metabolism flavoprotein [Zymomonas mobilis]
Length = 417
Score = 184 bits (462), Expect = 2e-45
Identities = 131/409 (32%), Positives = 214/409 (52%), Gaps = 40/409 (9%)
Query: 16 LVGKKIVLAIPGSIAAVECVKLARELIRHGAEVHAVMSPSATKIIHPYAMEFATGNPVIT 75
L GK+I+L I GSIAA++ + R + A++ +++ I P A+ +GNPV
Sbjct: 5 LNGKRILLVISGSIAAIKAPDIIRLFRKKKADIRCLITKGGANFITPLALASLSGNPVAQ 64
Query: 76 EI-----TGSIEHVELAGEHENKADLILVCPATANTISKIACGIDDTPVTTVVTTAFPHI 130
++ SI H+ LA E AD+I+V PA+A+ ISK+A G+ + +TVV A
Sbjct: 65 DMWDESEEASIRHIRLARE----ADMIIVAPASADFISKMAHGLANDLASTVVLAA--DS 118
Query: 131 PIMIAPAMHESMYKHPIVRENIEKLKKLGVEFIGPRI------EEGKAKVATIDEIVYRV 184
PI++APAM+ M+ H + NI +LK G+ F+ P E G ++A ++I+
Sbjct: 119 PILVAPAMNHRMWHHSATQRNIHQLKSDGISFVDPEAGAMACGETGIGRLAAPEDILLSA 178
Query: 185 ----IKKLHPKTLEGKRVLITAGATREYIDPIRFITNASSGKMGVALAEEAEFRGAEVTL 240
++ + + L+ + ++TAG T E IDP+R++ N SSGK G A+AE + GA+VTL
Sbjct: 179 ESLFAEEQNHQFLKNRHFIVTAGPTHEPIDPVRYLANRSSGKQGFAIAEALQKLGAKVTL 238
Query: 241 IRTRGSVKSFVENQIE---VETVEEMLGAIEEELTKKKYDVVIMAAAVSDFKPKIKAKEK 297
+ G V +++E VET EM A+E L D I AAV+D++ +
Sbjct: 239 V--TGPVYQNTPDRVERVNVETAIEMEKAVENALPA---DGAIFTAAVADWRFNYSPSKY 293
Query: 298 IKSDKSITLELVPNPKIIRKI--KEIQSDVFLVGFKAETSMEKLISEAKKQIESAGSDLV 355
K L + P+I+ I ++I +VGF AE+ E L+ AK +++ G D +
Sbjct: 294 KKGRSEPELIPIEKPEILSNISKRKIDRPSLVVGFAAES--ENLLENAKVKLQQKGCDWI 351
Query: 356 IGNTL-------EAFGSEESKVVIVGKDFVKELPRMKKRELAERIWDEI 397
I N + A G + +K+ I ++ P + K+E+A R+ +I
Sbjct: 352 IANPVIESEDAPSAMGGDYNKIFIASHAGIENWPLLSKKEVASRLASKI 400
>emb|CAB93357.1| (AL357523) putative flavoprotein homologue (partial) [Streptomyces
coelicolor A3(2)]
Length = 376
Score = 184 bits (462), Expect = 2e-45
Identities = 126/370 (34%), Positives = 198/370 (53%), Gaps = 29/370 (7%)
Query: 5 IKLIYATKSRKLVGKKIVLAIPGSIAAVECVKLARELIRHGAEVHAVMSPSATKIIHPYA 64
++ Y ++ + K+VL + G IAA + +L R L G EV V + SA +
Sbjct: 17 VRARYPSRGETVDKPKVVLGVSGGIAAYKACELLRRLTESGHEVRVVPTASALHFVGAAT 76
Query: 65 MEFATGNPVITEITGSIE---HVELAGEHENKADLILVCPATANTISKIACGIDDTPVTT 121
+GNPV TE+ + HV + G+H ADL++V PATA+ ++K A G+ D +T
Sbjct: 77 WSALSGNPVSTEVWDDVHEVPHVRI-GQH---ADLVVVAPATADMLAKAAHGLADDLLTN 132
Query: 122 VVTTAFPHIPIMIAPAMHESMYKHPIVRENIEKLKKLGVEFIGPRI------EEGKAKV- 174
+ TA P++ APAMH M++HP +EN+ L++ G I P + + GK ++
Sbjct: 133 TLLTA--RCPVVFAPAMHTEMWEHPATQENVAALRRRGAVVIEPAVGRLTGVDTGKGRLP 190
Query: 175 --ATIDEIVYRVIKK-LHPKTLEGKRVLITAGATREYIDPIRFITNASSGKMGVALAEEA 231
I E+ RV+ + + L G+ V+++AG TRE +DP+RF+ N SSGK G ALA A
Sbjct: 191 DPGEIFEVCRRVLARGVREPDLAGRHVVVSAGGTREPLDPVRFLGNRSSGKQGYALARTA 250
Query: 232 EFRGAEVTLIRTRGSVKSFV-ENQIEVETVEEMLGAIEEELTKKKYDVVIMAAAVSDFKP 290
RGA VTL+ S+ + + V T E+ A+ D V+MAAAV+DF+P
Sbjct: 251 AARGARVTLVAANASMPDPAGVDVVPVGTAVELREAVLRAAADA--DAVVMAAAVADFRP 308
Query: 291 KIKAKEKIK---SDKSITLELVPNPKIIRKIKE--IQSDVFLVGFKAETSMEKLISEAKK 345
A KIK + + LV NP I+ +I + +S +VGF AET + +++ +
Sbjct: 309 ATYATGKIKKKDDQEPAPITLVRNPDILAEISQTRARSGQVVVGFAAET--DDVLANGRV 366
Query: 346 QIESAGSDLV 355
+++ G DL+
Sbjct: 367 KLKRKGCDLL 376
>sp|P71661|DFP_MYCTU DNA/PANTOTHENATE METABOLISM FLAVOPROTEIN HOMOLOG
>gi|7449274|pir||E70899 pantothenate metabolism
flavoprotein dfp - Mycobacterium tuberculosis (strain
H37RV) >gi|1542899|emb|CAB02174.1| (Z80108) dfp
[Mycobacterium tuberculosis]
Length = 418
Score = 173 bits (433), Expect = 4e-42
Identities = 127/413 (30%), Positives = 213/413 (50%), Gaps = 38/413 (9%)
Query: 15 KLVGKKIVLAIPGSIAAVECVKLARELIRHGAEVHAVMSPSATKIIHPYAMEFATGNPVI 74
K + K++++ + G IAA + + R+L V + + SA + + E +G PV
Sbjct: 5 KRIPKQVIVGVSGGIAAYKACTVVRQLTEASHRVRVIPTESALRFVGAATFEALSGEPVC 64
Query: 75 TEITG---SIEHVELAGEHENKADLILVCPATANTISKIACGIDDTPVTTVVTTAFPHIP 131
T++ ++ HV L +ADL++V PATA+ +++ A G D +T + TA P
Sbjct: 65 TDVFADVPAVPHVHLG----QQADLVVVAPATADLLARAAAGRADDLLTATLLTA--RCP 118
Query: 132 IMIAPAMHESMYKHPIVRENIEKLKKLGVEFIGPRI------EEGKAKVATIDEI--VYR 183
++ APAMH M+ HP +N+ L++ G + P + G ++ +EI + +
Sbjct: 119 VLFAPAMHTEMWLHPATVDNVATLRRRGAVVLEPATGRLTGADSGAGRLPEAEEITTLAQ 178
Query: 184 VIKKLH---PKTLEGKRVLITAGATREYIDPIRFITNASSGKMGVALAEEAEFRGAEVTL 240
++ + H P L G+++L+TAG TRE IDP+RFI N SSGK G A+A A RGA+VTL
Sbjct: 179 LLLERHDALPYDLAGRKLLVTAGGTREPIDPVRFIGNRSSGKQGYAVARVAAQRGADVTL 238
Query: 241 I--RTRGSVKSFVENQIEVETVEEMLGAIEEELTKKKYDVVIMAAAVSDFKPKIKAKEKI 298
I T G V + V + +++ A+ + DV++MAAAV+DF+P A KI
Sbjct: 239 IAGHTAGLVDPAGVEVVHVSSAQQLADAVSKHAPTA--DVLVMAAAVADFRPAQVATAKI 296
Query: 299 KS--DKSITLELVPNPKII------RKIKEIQSDVFLVGFKAET--SMEKLISEAKKQIE 348
K + T+EL+ N ++ R ++ + +VGF AET + ++ A+ ++
Sbjct: 297 KKGVEGPPTIELLRNDDVLAGVVRARAHGQLPNMRAIVGFAAETGDANGDVLFHARAKLR 356
Query: 349 SAGSDLVIGNTL---EAFGSEESKVVIVGKDFVKE-LPRMKKRELAERIWDEI 397
G DL++ N + AF + + ++ D + L K +A RI D I
Sbjct: 357 RKGCDLLVVNAVGEGRAFEVDSNDGWLLASDGTESALQHGSKTLMASRIVDAI 409
>sp|P24285|DFP_ECOLI DNA/PANTOTHENATE METABOLISM FLAVOPROTEIN >gi|7430385|pir||A65165
pantothenate metabolism flavoprotein dfp - Escherichia
coli (strain K-12) >gi|1790070|gb|AAC76663.1|
(AE000441) flavoprotein affecting synthesis of DNA and
pantothenate metabolism [Escherichia coli K12]
Length = 430
Score = 173 bits (433), Expect = 4e-42
Identities = 127/405 (31%), Positives = 216/405 (52%), Gaps = 34/405 (8%)
Query: 16 LVGKKIVLAIPGSIAAVECVKLARELIRHGAEVHAVMSPSATKIIHPYAMEFATGNPVIT 75
L GKKIVL + G IAA + +L R L GA+V M+ +A I P +++ +G PV
Sbjct: 27 LAGKKIVLGVSGGIAAYKTPELVRRLRDRGADVRVAMTEAAKAFITPLSLQAVSGYPVSD 86
Query: 76 EIT-----GSIEHVELAGEHENKADLILVCPATANTISKIACGIDDTPVTTVVTTAFPHI 130
+ ++ H+EL ADL+++ PATA+ I+++A G+ + V+T+
Sbjct: 87 SLLDPAAEAAMGHIELG----KWADLVILAPATADLIARVAAGMANDLVSTICLAT--PA 140
Query: 131 PIMIAPAMHESMYKHPIVRENIEKLKKLGVEFIGPRI------EEGKAKVATIDEIVYRV 184
P+ + PAM++ MY+ + N+E L G+ GP + G ++ IV
Sbjct: 141 PVAVLPAMNQQMYRAAATQHNLEVLASRGLLIWGPDSGSQACGDIGPGRMLDPLTIVDMA 200
Query: 185 IKKLHP-KTLEGKRVLITAGATREYIDPIRFITNASSGKMGVALAEEAEFRGAEVTLIRT 243
+ P L+ ++ITAG TRE +DP+R+I+N SSGKMG A+A A RGA VTL+
Sbjct: 201 VAHFSPVNDLKHLNIMITAGPTREPLDPVRYISNHSSGKMGFAIAAAAARRGANVTLVSG 260
Query: 244 RGSVKS--FVENQIEVETVEEMLGAIEEELTKKKYDVVIMAAAVSDFKPKIKAKEKIKSD 301
S+ + FV+ +++V T EM A+ + ++ ++ I AAV+D++ A EKIK
Sbjct: 261 PVSLPTPPFVK-RVDVMTALEMEAAVNASV--QQQNIFIGCAAVADYRAATVAPEKIKKQ 317
Query: 302 KS----ITLELVPNPKIIRKIKEIQSD-VFLVGFKAETSMEKLISEAKKQIESAGSDLVI 356
+ +T+++V NP I+ + ++ ++VGF AET+ + + K+ ++ DL+
Sbjct: 318 ATQGDELTIKMVKNPDIVAGVAALKDHRPYVVGFAAETNNVEEYARQKRIRKNL--DLIC 375
Query: 357 GNTL----EAFGSEESKVVIVGKDFVKELPRMKKRELAERIWDEI 397
N + + F S+ + + + +D K LP +K L + + DEI
Sbjct: 376 ANDVSQPTQGFNSDNNALHLFWQDGDKVLPLERKELLGQLLLDEI 420
>gb|AAA61992.1| (L10328) dfp (CG Site No. 18430) [Escherichia coli]
Length = 430
Score = 172 bits (432), Expect = 5e-42
Identities = 127/405 (31%), Positives = 215/405 (52%), Gaps = 34/405 (8%)
Query: 16 LVGKKIVLAIPGSIAAVECVKLARELIRHGAEVHAVMSPSATKIIHPYAMEFATGNPVIT 75
L GKKIVL + G IAA + +L R L GA+V M+ +A I P +++ +G PV
Sbjct: 27 LAGKKIVLGVSGGIAAYKTPELVRRLRDRGADVRVAMTEAAKAFITPLSLQAVSGYPVSD 86
Query: 76 EIT-----GSIEHVELAGEHENKADLILVCPATANTISKIACGIDDTPVTTVVTTAFPHI 130
+ ++ H+EL ADL+++ PATA+ I+++A G+ + V+T+
Sbjct: 87 SLLDPAAEAAMGHIELG----KWADLVILAPATADLIARVAAGMANDLVSTICLAT--PA 140
Query: 131 PIMIAPAMHESMYKHPIVRENIEKLKKLGVEFIGPRI------EEGKAKVATIDEIVYRV 184
P+ + PAM++ MY+ + N+E L G+ GP + G + IV
Sbjct: 141 PVAVLPAMNQQMYRAAATQHNLEVLASRGLLIWGPDSGSQACGDIGPGRXXDPLTIVDMA 200
Query: 185 IKKLHP-KTLEGKRVLITAGATREYIDPIRFITNASSGKMGVALAEEAEFRGAEVTLIRT 243
+ P L+ ++ITAG TRE +DP+R+I+N SSGKMG A+A A RGA VTL+
Sbjct: 201 VAHFSPVNDLKHLNIMITAGPTREPLDPVRYISNHSSGKMGFAIAAAAARRGANVTLVSG 260
Query: 244 RGSVKS--FVENQIEVETVEEMLGAIEEELTKKKYDVVIMAAAVSDFKPKIKAKEKIKSD 301
S+ + FV+ +++V T EM A+ + ++ ++ I AAV+D++ A EKIK
Sbjct: 261 PVSLPTPPFVK-RVDVMTALEMEAAVNASV--QQQNIFIGCAAVADYRAATVAPEKIKKQ 317
Query: 302 KS----ITLELVPNPKIIRKIKEIQSD-VFLVGFKAETSMEKLISEAKKQIESAGSDLVI 356
+ +T+++V NP I+ + ++ ++VGF AET+ + + K+ ++ DL+
Sbjct: 318 ATQGDELTIKMVKNPDIVAGVAALKDHRPYVVGFAAETNNVEEYARQKRIRKNL--DLIC 375
Query: 357 GNTL----EAFGSEESKVVIVGKDFVKELPRMKKRELAERIWDEI 397
N + + F S+ + + + +D K LP +K L + + DEI
Sbjct: 376 ANDVSQPTQGFNSDNNALHLFWQDGDKVLPLERKELLGQLLLDEI 420
>pir||H82842 DNA/pantothenate metabolism flavoprotein XF0149 [imported] -
Xylella fastidiosa (strain 9a5c)
>gi|9104938|gb|AAF82962.1|AE003868_8 (AE003868)
DNA/pantothenate metabolism flavoprotein [Xylella
fastidiosa]
Length = 409
Score = 171 bits (430), Expect = 9e-42
Identities = 133/407 (32%), Positives = 221/407 (53%), Gaps = 42/407 (10%)
Query: 14 RKLVGKKIVLAIPGSIAAVECVKLARELIRHGAEVHAVMSPSATKIIHPYAMEFATGNPV 73
R L G++++L + G IAA + ++L R L G +V M+ SA + + P + + +G
Sbjct: 8 RSLNGQRLLLCVSGGIAAYKSLELVRRLCGAGVQVQVAMTASAQQFVTPLSFQALSGQST 67
Query: 74 ITEI-TGSIE----HVELAGEHENKADLILVCPATANTISKIACGIDDTPVTTV--VTTA 126
T + G+ E H+ELA A+ +L+ PA+A+ I+++A G+ D VTT+ TTA
Sbjct: 68 RTTLWDGNAEQAMGHIELA----RWAECVLIAPASADVIARLAHGLADDLVTTLCLATTA 123
Query: 127 FPHIPIMIAPAMHESMYKHPIVRENIEKLKKLGVEFIGPR---IEEGKAKVATIDE---I 180
++I PAM+ +M+ HP + N+ L GV+ IGP + EG + + + E I
Sbjct: 124 L----LIICPAMNHNMWLHPATQANVAMLVGRGVQVIGPEDGPLAEGVSGLGRMSEPEAI 179
Query: 181 VYRVIKKLHPKTLEG-----KRVLITAGATREYIDPIRFITNASSGKMGVALAEEAEFRG 235
V +++ + P + G +R++I+AG T E +DP+R++ N SSGKMG ALA A G
Sbjct: 180 VAALVQGVSPAPVHGGLFHGQRIVISAGPTFEDLDPVRYLGNRSSGKMGFALASAAVSHG 239
Query: 236 AEVTLIRTRGSVKSFVE---NQIEVETVEEMLGAIEEELTKKKYDVVIMAAAVSDFKPKI 292
AEV L+ G V +++V + +M A+ L+ DV I AAAV+D+ PK
Sbjct: 240 AEVVLV--AGPVYQPTPPGVTRVDVRSAAQMRDAV---LSAFPADVYIGAAAVADYAPKS 294
Query: 293 KAKEKI-KSDKSITLELVPNPKIIRKIKEIQSDV-FLVGFKAETSMEKLISEAKKQIESA 350
+KI KS +++TLELV I+ ++ +++ F+VGF AET + A+ ++ +
Sbjct: 295 VLPQKIKKSGQTLTLELVRTQDILSEVAAQTANLKFVVGFAAET--HDVERYARGKLAAK 352
Query: 351 GSDLVIGNTL----EAFGSEESKVVIVGKDFVKELPRMKKRELAERI 393
DL+I N + F S+++ V + + + K ELAER+
Sbjct: 353 HLDLIIANQVGIVGNGFESDDNAVTVYWQGGERVFASCSKVELAERL 399
>pir||H75501 DNA/pantothenate metabolism flavoprotein - Deinococcus radiodurans
(strain R1) >gi|6458275|gb|AAF10158.1|AE001916_4
(AE001916) DNA/pantothenate metabolism flavoprotein
[Deinococcus radiodurans]
Length = 422
Score = 167 bits (419), Expect = 2e-40
Identities = 132/405 (32%), Positives = 209/405 (51%), Gaps = 39/405 (9%)
Query: 22 VLAIPGSIAAVECVKLARELIRHGAEVHAVMSPSATKIIHPYAMEFATGNPVITEITGSI 81
++ + GS+AAV+ R L GA + + +A I P ++ A V T+ T
Sbjct: 19 LVIVGGSMAAVKAPTALRRLREGGASTAVIATRAALAFITPLSLATAGNCEVATDETWFA 78
Query: 82 -----EHVELAGEHENKADLILVCPATANTISKIACGIDDTPVTTVVTTAFPHIPIMIAP 136
+H+ LA +A + +V A+A ++ A G DT T + +A + + P
Sbjct: 79 PQPIAQHLSLA-----RARVTVVLGASAELLAAAAHGHADTLATATLLSAEGQV--LWVP 131
Query: 137 AMHESMYKHPIVRENIEKLKKLGVEFIGPRIE--------EGKAKVATIDEIVYRVIKKL 188
AM+E M+ HP V+ N E+L+ G F+GP G ++A + I R + L
Sbjct: 132 AMNERMWLHPAVQANAERLRGWGHLFLGPETGAFGTPGEGSGTGRMAEPEAIAARALALL 191
Query: 189 H---------PKTLEGKRVLITAGATREYIDPIRFITNASSGKMGVALAEEAEFRGAEVT 239
+ P+ L G +V+++AG TREY+DP+RFI+N SSGKMG A+AEEA RGAEV
Sbjct: 192 NEQDAEAEAAPQDLAGLKVVVSAGPTREYLDPVRFISNPSSGKMGFAVAEEARTRGAEVV 251
Query: 240 LIRTRGSVKSFVENQ-IEVETVEEMLGAIEEELTKKKYDVVIMAAAVSDFKPKI-KAKEK 297
L+ ++ Q + +ET EM AI E D+V+M AA++D++ K++++
Sbjct: 252 LVTGPVNLPDLSGVQTVRIETALEMQAAIME--AAGDADMVVMTAAIADYRAAAPKSEKE 309
Query: 298 IKSDKSITLELVPNPKIIRKIKEIQS---DVFLVGFKAETSMEKLISEAKKQIESAGSDL 354
K+ +T+ L PNP I+ + Q+ LVGF ET + K Q ++A L
Sbjct: 310 AKTPGDVTIHLTPNPDILAGLGAEQAAHPGRVLVGFAMETHAGVERAALKAQRKNADFIL 369
Query: 355 VIGNTLE--AFGSEESKVVIVGKDFV-KELPRMKKRELAERIWDE 396
+ T E AFG ++++V +V D + PR+ KRE+A R+ DE
Sbjct: 370 LNYPTREGTAFGGDDNQVTLVRADGTHADWPRISKREVARRLLDE 414
>sp|P73881|DFP_SYNY3 DNA/PANTOTHENATE METABOLISM FLAVOPROTEIN HOMOLOG
>gi|7449262|pir||S75082 pantothenate metabolism
flavoprotein dfp homolog sll0250 - Synechocystis sp.
(strain PCC 6803) >gi|1653027|dbj|BAA17944.1| (D90910)
pantothenate metabolism flavoprotein [Synechocystis sp.]
Length = 402
Score = 166 bits (415), Expect = 5e-40
Identities = 124/407 (30%), Positives = 212/407 (51%), Gaps = 31/407 (7%)
Query: 18 GKKIVLAIPGSIAAVECVKLARELIRHGAEVHAVMSPSATKIIHPYAMEFATGNPVI--T 75
GK+I++ + G IAA + ++ +L + GAEV +++ A K + P +P
Sbjct: 4 GKRILIGVGGGIAAYKICEVVSQLFQQGAEVRVILTAEAEKFVTPLTFTTLARHPAYGDA 63
Query: 76 EITGSIEHVELAGEHENKADLILVCPATANTISKIACGIDDTPVTTVVTTAFPHIPIMIA 135
+ I H L + AD+ L+ P TA+T++K+ G D ++ V + PI++A
Sbjct: 64 DFWQPIHHRPLHIDLGEWADIFLIAPLTAHTLAKLGHGFADDLLSNTVLAS--SCPILLA 121
Query: 136 PAMHESMYKHPIVRENIEKLKKLG---VEFIGPR------IEEGKAKVATIDEIVYRVIK 186
PAM+ M++ V+ N+++L LG + P G ++A +I++R+
Sbjct: 122 PAMNTDMWEQEAVQRNLQQL--LGDRRYHLLAPNGGLLACDRRGVGRLAEPAQIMHRLQA 179
Query: 187 KLHP---KTLEGKRVLITAGATREYIDPIRFITNASSGKMGVALAEEAEFRGAEVTLIRT 243
L + L GKR+LITAG T+EY+D +RFI N S+GKMG+ALA+ A RGA VTLI
Sbjct: 180 LLFTGGQEDLRGKRILITAGGTQEYLDAVRFIGNPSTGKMGLALAQSAGDRGARVTLIHG 239
Query: 244 RGSVKSFVENQIEVETV--EEMLGAIEEELTKKKYDVVIMAAAVSDFKPKIKAKEKI-KS 300
I + V E+M A+ ++ D ++MAAAV+D KP KI K
Sbjct: 240 PIGDLPIPMGVISMAVVNAEQMEQALAQQAPLA--DWIVMAAAVADVKPAQTWTGKIAKQ 297
Query: 301 DKSITLELVPNPKIIRKI-KEIQSDVFLVGFKAETSMEKLISEAKKQIESAGSDLVIGNT 359
D +L L P P +I ++ K+ + LVGF A+ +++ AK++++ D+++ N
Sbjct: 298 DLPDSLPLAPVPDLIAQVSKQKRPHQLLVGFAAQAG--DIVTPAKEKLQRKNLDVIVANP 355
Query: 360 LE----AFGSEESKVVIVGKDFVK-ELPRMKKRELAERIWDEIEKKI 401
++ FG++ ++ VI+ + + + K +A RIW + ++I
Sbjct: 356 IDQPQSGFGTDSNQAVIIDRHGSQTAIAPCSKLAMAHRIWQYLLERI 402
>gb|AAB97414.1| (AF042096) panthotenate metabolism flavoprotein [Bradyrhizobium
japonicum]
Length = 444
Score = 143 bits (356), Expect = 4e-33
Identities = 125/420 (29%), Positives = 199/420 (46%), Gaps = 44/420 (10%)
Query: 16 LVGKKIVLAIPGSIAAVECVKLARELIR--HGAEVHAVM---SPSATKII--HPYAMEFA 68
L + L I G IA ++ + L R L H + S S T ++ P+ M +
Sbjct: 26 LAEASVTLIIGGGIARLKSLDLIRRLKERCHRGPLRTDQTRPSSSVTPLVGQRPFRMSAS 85
Query: 69 TGNPVITEITGSIEHVELAGEHENKADLILVCPATANTISKIACGIDDTPVTTVVTTAFP 128
I H+ LA + DLI+V PATA+ +SK+A G D + ++
Sbjct: 86 IPTCPIPRSEFDAGHIRLARD----CDLIVVAPATADLMSKMANGHADDLASAILLAT-- 139
Query: 129 HIPIMIAPAMHESMYKHPIVRENIEKLKKLGVEFIGPR----IEEGKAKVATIDEIVY-- 182
+ +++APAM+ M+ + R N+ +L++ GV IGP E G+A + + E +
Sbjct: 140 NRKVLLAPAMNPLMWNNAATRRNVAQLQRDGVVLIGPNSGEMAEAGEAGIGRMSEALEIA 199
Query: 183 ----RVIKKLHPKTLEGKRVLITAGATREYIDPIRFITNASSGKMGVALAEEAEFRGAEV 238
R+++ P+ L GKRVLITAG T E IDP+R+I N SSGK G A+A A+ GAEV
Sbjct: 200 AAAERLLRPPVPRPLAGKRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAQAAGAEV 259
Query: 239 TLIRTRGSVKSFVENQIEVETVEEMLGAIEEELTKKKYDVVIMAAAVS-DFKPKIKAKEK 297
L+ G V + V+ VE +E+ D+ I S D++ + ++K
Sbjct: 260 ILV--SGPVDLGDPQGVTVKHVESARQMLEQVQAALPADIAIFQPPRSPDWRVANEGEQK 317
Query: 298 IKSDKS--ITLELVPNPKIIRKIKEI--QSDVFLVGFKAETSMEKLISEAKKQIESAGSD 353
+K + L+LV NP I+ I ++ + L+GF AET E LI AK ++ G D
Sbjct: 318 LKKTSAGMPPLQLVENPDILATIAKLTDKRPPLLIGFAAET--EHLIDNAKTKLARKGCD 375
Query: 354 LVIGNTLE----AFGSEESKVVIV--------GKDFVKELPRMKKRELAERIWDEIEKKI 401
++ N + G + + V ++ G+ V P M K ++A + I K +
Sbjct: 376 WIVANDVSPATGVMGGDRNTVHLISRKNGEKNGEIAVDSWPAMTKEQVATELIAHIVKSV 435
>pir||E71889 pantothenate metabolism flavoprotein dfp homolog HP0841 -
Helicobacter pylori (strain J99)
>gi|4155346|gb|AAD06359.1| (AE001508) PANTOTHENATE
METABOLISM FLAVOPROTEIN [Helicobacter pylori J99]
Length = 425
Score = 134 bits (334), Expect = 2e-30
Identities = 115/417 (27%), Positives = 198/417 (46%), Gaps = 39/417 (9%)
Query: 14 RKLVGKKIVLAIPGSIAAVECVKLARELIRHGAEVHAVMSPSATKIIHPYAMEFATGNPV 73
R L K+++L + GSIAA + ++L R L + GA + VMS A K I P + E + + V
Sbjct: 12 RLLENKRVLLLVSGSIAAYKSLELVRLLFKSGASIQVVMSKGAQKFIKPLSFEALSHHKV 71
Query: 74 ITEITGSIEHVELAGEHEN------KADLILVCPATANTISKIACGI-DDTPVTTVVTTA 126
+ + + H N ADL++ P +AN++SKIA + D+T T + A
Sbjct: 72 LHDRNEKWYYNHQNKLHHNHIACAASADLLIFAPLSANSLSKIAHALADNTISATFLACA 131
Query: 127 FPHIPIMIAPAMHESMYKHPIVRENIEKLKKLGVEFIGPR------IEEGKAKVATIDEI 180
P I +AP+M+ +M PI++ N+++LK + + +G +A EI
Sbjct: 132 SPKI---LAPSMNTNMLNSPIIQSNLKRLKDSNHIILDTQNALLACNTKGDGAMAEPLEI 188
Query: 181 VYRVIKK-LHPKTLEGKRVLITAGATREYIDPIRFITNASSGKMGVALAEEAEFRGAEVT 239
+++ + L E + V++ GA+ E ID +R I+N SSG ALA F+GA+VT
Sbjct: 189 LFKATQTLLKDAYFENREVIVMGGASVEKIDSVRVISNLSSGIQASALALALYFKGAKVT 248
Query: 240 LIRTR------GSVKSFVENQIEVETVEEMLGAIEEELTKKKYDVVIM-AAAVSDFKPKI 292
LI + + S + + + + E L + L K ++ AA+SD+ PK
Sbjct: 249 LIASNFPTPLPKEIASVLVS--DTASYENALNEAAKNLQKHALKPLLFNLAAISDYLPKT 306
Query: 293 KAKEKIKSD---KSITLELVPNPKIIRKIKEIQSDVFLVGFKAETSMEKLISEAK---KQ 346
K+K +++ +E V N ++ + Q +GFKAE + I A+ K
Sbjct: 307 SFNHKLKKSELGETLNVECVQNKDLLASVNPNQ--FVKIGFKAEDDQQNAIKNAQNLLKP 364
Query: 347 IESAGSDLVIG-----NTLEAFGSEESKVVIVGKDFVKELPRMKKRELAERIWDEIE 398
+ G D + FGS ++++ + +++P M K E + +I D I+
Sbjct: 365 SQDNGKDCSVAALNLIKDSRPFGSLDNELWLFSHKKTQKIPSMNKLEASFKILDFIK 421
>pir||A64625 pantothenate metabolism flavoprotein dfp homolog HP0841 -
Helicobacter pylori (strain 26695)
>gi|2313973|gb|AAD07888.1| (AE000595) pantothenate
metabolism flavoprotein (dfp) [Helicobacter pylori
26695]
Length = 425
Score = 133 bits (332), Expect = 3e-30
Identities = 118/417 (28%), Positives = 201/417 (47%), Gaps = 39/417 (9%)
Query: 14 RKLVGKKIVLAIPGSIAAVECVKLARELIRHGAEVHAVMSPSATKIIHPYAMEFATGNPV 73
R L K+++L + GSIAA + ++L R L + GA + VMS A K I P + E + + V
Sbjct: 12 RLLENKRVLLLVSGSIAAYKSLELVRLLFKSGASIQVVMSKGAKKFIKPLSFEALSHHKV 71
Query: 74 ITEITGSIEHVELAGEHEN------KADLILVCPATANTISKIACGIDDTPVT-TVVTTA 126
+ + + H N ADL++ P + N++SKIA + D V+ T + A
Sbjct: 72 LHDRNEKWYYNHQNALHHNHIACAANADLLIFAPLSTNSLSKIAHALADNIVSATFLACA 131
Query: 127 FPHIPIMIAPAMHESMYKHPIVRENIEKLKKLGVEFIGPR------IEEGKAKVATIDEI 180
P I +AP+M+ +M PI + N+++LK + + +G +A EI
Sbjct: 132 SPKI---LAPSMNTNMLNSPITQSNLKRLKDSNHIILDTKNALLACDTKGDGAMAEPLEI 188
Query: 181 VYRVIKK-LHPKTLEGKRVLITAGATREYIDPIRFITNASSGKMGVALAEEAEFRGAEVT 239
+++ + L E + V++ GA+ E ID +R I+N SSG ALA F+GA+VT
Sbjct: 189 LFKAAQTLLKDAYFENREVIVMGGASIEKIDSVRTISNLSSGIQASALALALYFKGAKVT 248
Query: 240 LIRTR------GSVKSFVENQIEVETVEEMLGAIEEELTKKKYDVVIM-AAAVSDFKPKI 292
LI + + S + + + + E L + L K ++ AA+SD+ PK
Sbjct: 249 LIASNFPTPLPKEITSVLVS--DTASYENALNSAANNLQKHALKPLLFNLAAISDYVPKT 306
Query: 293 KAKEKIKSD---KSITLELVPNPKIIRKIKEIQSDVFLVGFKAETSMEKLISEAK---KQ 346
K+K +++ +E V N ++ I Q +GFKAE + + I A+ K
Sbjct: 307 SFNYKLKKSEIGETLNIECVQNKDLLVSINPNQ--FVKIGFKAEDNQQNAIKNAQNLLKP 364
Query: 347 IESAGSD--LVIGNTLE---AFGSEESKVVIVGKDFVKELPRMKKRELAERIWDEIE 398
+ G D +V N ++ FGS E+++ + +++P M K E + +I D I+
Sbjct: 365 FKDNGKDCSVVALNLIKDSRPFGSLENELWLFSHHKTQKIPSMNKLEASFKILDFIK 421
>pir||F81354 DNA /pantothenate metabolism flavoprotein Cj0822 [imported] -
Campylobacter jejuni (strain NCTC 11168)
>gi|6968268|emb|CAB73087.1| (AL139076) DNA /pantothenate
metabolism flavoprotein [Campylobacter jejuni]
Length = 384
Score = 125 bits (310), Expect = 1e-27
Identities = 115/396 (29%), Positives = 196/396 (49%), Gaps = 29/396 (7%)
Query: 19 KKIVLAIPGSIAAVECVKLARELIRHGAEVHAVMSPSATKIIHPYAMEFATGNPVITEIT 78
K I+LAI GSIA + +L + G V ++S K + E A + V+ E
Sbjct: 2 KTILLAISGSIAFYKSYELISLFKKEGFRVKVLLSNGLLKFASKMSFE-ALVDEVLCEEN 60
Query: 79 GSIEHVELAGEHENKADLILVCPATANTISKIACGIDDTPVTTVVTTAFPHIPIMIAPAM 138
S ++ DL+L PA+ N+I+K+A GI D + A + P++IAPA
Sbjct: 61 ESWQNSNNHIAFSKDVDLVLFTPASVNSINKLAFGIADNLFIQTLIAA--NKPLIIAPAA 118
Query: 139 HESMYKHPIVRENIEKLKKLGVEFIGPRI------EEGKAKVATIDEIVYRVIKK--LHP 190
+ +M+ H + +++ LK+ I P +EG +A + +I + + K+ L
Sbjct: 119 NTNMFHHFSTQNSLKILKENKALIIEPICKVLACKDEGVGALAEVKDI-FNITKRELLKE 177
Query: 191 KTLEGKRVLITAGATREYIDPIRFITNASSGKMGVALAEEAEFRGAEVTLIRTRGSVKSF 250
K K V+IT G TRE ID +R ++N SSGKM A+A+ F GA V L+ SV+
Sbjct: 178 KFWCNKSVVITGGGTRERIDDVRCVSNFSSGKMAKAIADAFYFLGARVKLL---SSVEFD 234
Query: 251 VENQI-EVETVEEMLGAIEEELTKKKYDVVIMAAAVSDFKPKIKAKEKIKSD---KSITL 306
++ + E+ +++ +++ L+ +D +IM AAVSDF P+ K KIK + + + L
Sbjct: 235 TPYELCKFESSKDLKELLDKNLS---HDFLIMTAAVSDFIPQ-SVKGKIKKNEHLQGLNL 290
Query: 307 ELVPNPKIIRKIKEIQSDVFLVGFKAETSMEKLISEAKKQIESAGSDLVIGNTLEA---F 363
L N +++ K Q +GFK E + + AKK ++ D+V N ++ F
Sbjct: 291 HLSLNEDLLKTCK-FQGK--KIGFKMEFDSQNALENAKKSLKDKQLDMVCLNIIDQKNYF 347
Query: 364 GSEESKVVIVGKDFVKELPRMKKRELAERIWDEIEK 399
GS+++++ + + + K +LA + EK
Sbjct: 348 GSDQNELYFITLNNENKSTLQSKEKLAFELVKWCEK 383
>sp|Q54433|DFP_STRMU DNA/PANTOTHENATE METABOLISM FLAVOPROTEIN HOMOLOG
>gi|1216490|gb|AAC44502.1| (U48885) DNA/pantothenate
metabolism flavoprotein [Streptococcus mutans]
Length = 145
Score = 94.0 bits (230), Expect = 3e-18
Identities = 55/146 (37%), Positives = 83/146 (56%), Gaps = 9/146 (6%)
Query: 19 KKIVLAIPGSIAAVECVKLARELIRHGAEVHAVMSPSATKIIHPYAMEFATGNPVITEIT 78
KKI+LA+ GSIAA + L+ +L + G V+ M+ +A + I P ++ + NPV + +
Sbjct: 3 KKILLAVSGSIAAYKAADLSHQLTKLGYHVNVFMTNAAKQFIPPLTLQVLSKNPVYSNVM 62
Query: 79 GS-----IEHVELAGEHENKADLILVCPATANTISKIACGIDDTPVTTVVTTAFPHIPIM 133
I H+ LA +ADL L+ PA+ANT++ +A G D VT+V +P
Sbjct: 63 KEDDPQVINHIALA----KQADLFLLPPASANTLAHLAHGFADNIVTSVALALPLEVPKF 118
Query: 134 IAPAMHESMYKHPIVRENIEKLKKLG 159
APAM+ MY++PI + NI LKK G
Sbjct: 119 FAPAMNTKMYENPITQSNITLLKKFG 144
>gi|9634784 ORF FPV114 HAL3 domain [Fowlpox virus]
>gi|7271612|gb|AAF44458.1|AF198100_105 (AF198100) ORF
FPV114 HAL3 domain [Fowlpox virus]
Length = 183
Score = 80.4 bits (195), Expect = 3e-14
Identities = 58/185 (31%), Positives = 100/185 (53%), Gaps = 25/185 (13%)
Query: 20 KIVLAIPGSIAAVECVKLARELIR-HGAEVHAVMSPSATKIIHPYAMEFATGNPVITE-- 76
KI++ I GS+AAV+ L +EL R E+ V + ++ K + + G P+ T+
Sbjct: 5 KILIGITGSVAAVKLPDLIKELTRLENIELRIVATENSMK----FTDQKTIGIPIYTDKD 60
Query: 77 -------ITGSIEHVELAGEHENKADLILVCPATANTISKIACGIDDTPVTTVVTTAFPH 129
I + H+EL AD+ ++ P TANT++KIA GI D +T++V +
Sbjct: 61 EWTTWKKIPDPVLHIEL----RRWADVFIIAPLTANTLAKIANGICDNLLTSIVRAWDTN 116
Query: 130 IPIMIAPAMHESMYKHPIVRENIEKLKKLG---VEFIGPRI---EEGKAKVATIDEIVYR 183
P++ PAM+ M++HPI ++I+ LK +G +E I ++ + G +A + EI YR
Sbjct: 117 KPLIFCPAMNTLMWEHPITEKHIDTLKYMGFIEIECIEKKLACGDVGNGAMAEVAEI-YR 175
Query: 184 VIKKL 188
V++ +
Sbjct: 176 VVRDI 180
>pir||T37719 thymidylate synthase-like DNA metabolism protein - fission yeast
(Schizosaccharomyces pombe) >gi|5725409|emb|CAB52423.1|
(AL109770) thymidylate synthase-like DNA metabolism
protein [Schizosaccharomyces pombe]
Length = 625
Score = 70.6 bits (170), Expect = 3e-11
Identities = 65/212 (30%), Positives = 106/212 (49%), Gaps = 30/212 (14%)
Query: 12 KSRKLVGKK--IVLAIPGSIAAVECVKLARELIRH-GAEVHAVMSPSATKIIHPYAMEFA 68
K R+L K I++A GS+AA++ + + L+ + G +V V++ A + + A
Sbjct: 22 KERQLTDSKYHILVAATGSVAAIKLTLIVKSLLTYKGVDVQVVLTDPARNFVEKEDLT-A 80
Query: 69 TGNPVITE---------ITGSIEHVELAGEHENKADLILVCPATANTISKIACGIDDTPV 119
G V + I H+EL A L+L+ P +ANT++K+A G+ D +
Sbjct: 81 LGVNVYNNADDWKNWDGLECPITHIEL----RRWAHLLLIAPLSANTMAKMANGLCDNLL 136
Query: 120 TTVVTTAFPHIPIMIAPAMHESMYKHPIVRENIEKLKKL--GVEFIGPRIEE-------G 170
T+++ P PI++APAM+ M+ +PI +E++ + ++ EFI P IE+ G
Sbjct: 137 TSLIRAWAPLKPILLAPAMNTLMWTNPITQEHLSAISRIYKNSEFIMP-IEKVLACGDIG 195
Query: 171 KAKVATIDEIVYRVIKKLHPKTLEGKRVLITA 202
+A IV RV KL LE K VL A
Sbjct: 196 MGGMAEWRNIVGRVADKLQ---LEQKSVLPNA 224
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.316 0.134 0.361
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 132070022
Number of Sequences: 2977
Number of extensions: 5215924
Number of successful extensions: 19023
Number of sequences better than 1.0e-10: 35
Number of HSP's better than 0.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 18875
Number of HSP's gapped (non-prelim): 36
length of query: 401
length of database: 189,106,746
effective HSP length: 62
effective length of query: 339
effective length of database: 152,000,552
effective search space: 51528187128
effective search space used: 51528187128
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.6 bits)
S2: 166 (69.1 bits)