BLASTP 2.0.10 [Aug-26-1999] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= PAB1922 (PAB1922) DE:Hypothetical protein (132 letters) Database: ./suso.pep; /banques/blast2/nr.pep 598,487 sequences; 189,106,746 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value pir||F75108 hypothetical protein PAB1922 - Pyrococcus abyssi (st... 259 1e-68 pir||D71081 hypothetical protein PH0914 - Pyrococcus horikoshii ... 152 2e-36 pir||D72396 conserved hypothetical protein - Thermotoga maritima... 99 2e-20 >pir||F75108 hypothetical protein PAB1922 - Pyrococcus abyssi (strain Orsay) >gi|5458094|emb|CAB49583.1| (AJ248285) hypothetical protein [Pyrococcus abyssi] Length = 132 Score = 259 bits (654), Expect = 1e-68 Identities = 132/132 (100%), Positives = 132/132 (100%) Query: 1 MVELEKRYSIPHPSPGTIYPILTSLKKSGLIKSIGEGKRDKKLYSITEKGLKYLEEHKEE 60 MVELEKRYSIPHPSPGTIYPILTSLKKSGLIKSIGEGKRDKKLYSITEKGLKYLEEHKEE Sbjct: 1 MVELEKRYSIPHPSPGTIYPILTSLKKSGLIKSIGEGKRDKKLYSITEKGLKYLEEHKEE 60 Query: 61 LREALELVEKFKEFSNLGGRELAKVVKDILDSIDKLSEEQKEALAFEISEFTRRVRLILL 120 LREALELVEKFKEFSNLGGRELAKVVKDILDSIDKLSEEQKEALAFEISEFTRRVRLILL Sbjct: 61 LREALELVEKFKEFSNLGGRELAKVVKDILDSIDKLSEEQKEALAFEISEFTRRVRLILL 120 Query: 121 GEIPRREKDVRD 132 GEIPRREKDVRD Sbjct: 121 GEIPRREKDVRD 132 >pir||D71081 hypothetical protein PH0914 - Pyrococcus horikoshii >gi|3257327|dbj|BAA30010.1| (AP000004) 122aa long hypothetical protein [Pyrococcus horikoshii] Length = 122 Score = 152 bits (379), Expect = 2e-36 Identities = 75/121 (61%), Positives = 100/121 (81%), Gaps = 1/121 (0%) Query: 1 MVELEKRYSIPHPSPGTIYPILTSLKKSGLIKSIGEGKRDKKLYSITEKGLKYLEEHKEE 60 M ELEK + I SPG IYPIL+SL+KSGLI+ EGKR+KKLY ITEKG +YL++H++E Sbjct: 1 MSELEKTFGIK-VSPGAIYPILSSLRKSGLIEVAREGKREKKLYRITEKGEEYLKKHEDE 59 Query: 61 LREALELVEKFKEFSNLGGRELAKVVKDILDSIDKLSEEQKEALAFEISEFTRRVRLILL 120 + EALE+ K KEFS LGGRE+A+V+++++++IDKLSEEQK ALA E SEF +R+++ILL Sbjct: 60 VEEALEIANKLKEFSELGGREVAQVLREVIENIDKLSEEQKTALAREFSEFVKRIKIILL 119 Query: 121 G 121 G Sbjct: 120 G 120 >pir||D72396 conserved hypothetical protein - Thermotoga maritima (strain MSB8) >gi|4980784|gb|AAD35374.1|AE001710_9 (AE001710) conserved hypothetical protein [Thermotoga maritima] Length = 150 Score = 99.1 bits (243), Expect = 2e-20 Identities = 51/109 (46%), Positives = 71/109 (64%), Gaps = 2/109 (1%) Query: 13 PSPGTIYPILTSLKKSGLIKSIGEGKRDKKLYSITEKGLKYLEEHKEELREALELVEKFK 72 PSPG +YPIL+SL+K I++ EGKR K+Y +T+KG KYLEEHKEE+++AL+ E+F+ Sbjct: 39 PSPGALYPILSSLRKQKYIETYNEGKR--KVYRLTDKGRKYLEEHKEEIKKALDFAERFR 96 Query: 73 EFSNLGGRELAKVVKDILDSIDKLSEEQKEALAFEISEFTRRVRLILLG 121 FS + G L VV I + L+ EQK+ L +F R V I+ G Sbjct: 97 VFSEICGLSLRNVVDVIFKNAKDLTPEQKKKLKHATEDFERNVYNIIYG 145 Database: ./suso.pep Posted date: Jul 6, 2001 5:57 PM Number of letters in database: 840,471 Number of sequences in database: 2977 Database: /banques/blast2/nr.pep Posted date: Dec 14, 2000 12:46 PM Number of letters in database: 188,266,275 Number of sequences in database: 595,510 Lambda K H 0.314 0.137 0.363 Gapped Lambda K H 0.270 0.0470 0.230 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 45980648 Number of Sequences: 2977 Number of extensions: 1736023 Number of successful extensions: 10434 Number of sequences better than 1.0e-10: 3 Number of HSP's better than 0.0 without gapping: 3 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 10430 Number of HSP's gapped (non-prelim): 3 length of query: 132 length of database: 189,106,746 effective HSP length: 58 effective length of query: 74 effective length of database: 154,394,500 effective search space: 11425193000 effective search space used: 11425193000 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.8 bits) X3: 64 (24.9 bits) S1: 42 (21.9 bits) S2: 160 (66.7 bits)