BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB1923 (drrA-1) DE:daunorubicin resistance ATP-binding protein
(drrA-1)
(328 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||E75108 daunorubicin resistance ATP-binding protein (drra-1)... 661 0.0
pir||C71081 probable resistance ATP-binding protein - Pyrococcus... 535 e-151
gi|11499468 daunorubicin resistance ATP-binding protein (drrA) [... 511 e-144
pir||D72257 hypothetical protein TM1403 - Thermotoga maritima (s... 488 e-137
gb|AAK42315.1| ABC transporter, ATP binding protein. [Sulfolobus... 309 4e-83
pir||S74048 probable daunorubicin resistance protein - Sulfolobu... 309 4e-83
pir||D72492 probable ABC transporter ATP-binding protein APE2579... 285 6e-76
pir||C69012 ABC transporter (ATP-binding, daunorubicin resistanc... 277 2e-73
pir||C71197 probable ATP-binding transport protein - Pyrococcus ... 275 6e-73
pir||H75157 daunorubicin resistance ATP-binding protein (drra-2)... 270 2e-71
emb|CAC11998.1| (AL445065) ABC transporter related protein [Ther... 264 9e-70
dbj|BAB04773.1| (AP001510) transposase (08)/ABC transporter (ATP... 255 6e-67
dbj|BAA83955.1| (AB024563) YFIL [Bacillus halodurans] 254 1e-66
dbj|BAB05817.1| (AP001514) ABC transporter (ATP-binding protein)... 247 1e-64
gb|AAG32068.1|AF317790_1 (AF317790) ATP-binding transporter AviA... 244 9e-64
gb|AAD44229.1|AF143772_35 (AF143772) DrrA [Mycobacterium avium] 236 2e-61
pir||T36344 probable ABC-type transport system ATP-binding prote... 234 1e-60
gb|AAD20382.1| (AF125999) daunorubicin resistance protein A [Myc... 233 3e-60
sp|P32010|DRRA_STRPE DAUNORUBICIN RESISTANCE ATP-BINDING PROTEIN... 231 1e-59
pir||T50566 probable ABC-type transport protein, ATP-binding com... 229 4e-59
emb|CAC08315.1| (AL392149) putative ABC transport system ATP-bin... 227 2e-58
pir||G69803 ABC transporter (ATP-binding protein) homolog yfiL -... 226 2e-58
pir||T36505 probable ABC-type transport system ATP-binding compo... 226 4e-58
gb|AAC44357.1| (U43537) ATP-binding protein involved in mithramy... 224 1e-57
pir||S32908 hypothetical protein 4 - Streptomyces antibioticus >... 222 6e-57
pir||S76278 ABC-type transport protein sll0759 - Synechocystis s... 221 7e-57
emb|CAA75761.1| (Y15759) ORF1 [Streptomyces rochei] 217 1e-55
pir||B69065 ABC transporter (ATP-binding, daunorubicin resistanc... 216 2e-55
pir||D72484 probable ATP-binding protein APE2516 - Aeropyrum per... 216 3e-55
pir||T36741 probable ABC-type transport system ATP-binding prote... 214 1e-54
pir||S73019 daunorubicin resistance protein drrA - Mycobacterium... 213 2e-54
emb|CAC08414.1| (AL392178) putative ABC transport system ATP-bin... 213 2e-54
pir||H71008 probable ATP-binding transport protein - Pyrococcus ... 213 3e-54
pir||E75122 hypothetical protein PAB1845 - Pyrococcus abyssi (st... 212 4e-54
pir||G71131 probable ATP-binding protein - Pyrococcus horikoshii... 212 5e-54
sp|P55476|NODI_RHISN NODULATION ATP-BINDING PROTEIN I >gi|218242... 212 6e-54
emb|CAB94554.1| (AL359152) putative ABC transporter, ATP-binding... 211 1e-53
pir||C72568 probable ATP-binding transport protein APE1829 - Aer... 210 1e-53
pir||D70984 probable drrA protein - Mycobacterium tuberculosis (... 209 4e-53
sp|P72335|NODI_RHIS3 NODULATION ATP-BINDING PROTEIN I >gi|153162... 205 5e-52
pir||E72384 ABC transporter, ATP-binding protein - Thermotoga ma... 203 2e-51
emb|CAC11370.1| (AL445063) gliding motility protein related [The... 199 4e-50
gi|11498611 ABC transporter, ATP-binding protein [Archaeoglobus ... 197 1e-49
pir||S75436 hypothetical protein c05019 - Sulfolobus solfataricu... 196 2e-49
gb|AAK40417.1| ABC transporter, ATP binding protein [Sulfolobus ... 196 2e-49
pir||C69049 ABC transporter (ATP-binding protein) - Methanobacte... 192 5e-48
pir||B83294 probable ATP-binding component of ABC transporter PA... 192 5e-48
dbj|BAB07698.1| (AP001520) ABC transporter (ATP-binding protein)... 191 8e-48
dbj|BAA95019.1| (AB033992) ATP-binding protein [Streptomyces kas... 191 8e-48
pir||B75076 daunorubicin resistance ATP-binding protein drra PAB... 190 2e-47
pir||B64816 ABC-type transport protein ybhF - Escherichia coli >... 189 4e-47
sp|P75776|YBHF_ECOLI HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 189 4e-47
emb|CAB37661.1| (AJ224479) cdd4-like protein [Bacillus sphaericus] 188 7e-47
sp|P50332|NODI_RHIGA NODULATION ATP-BINDING PROTEIN I >gi|100191... 187 1e-46
sp|P08720|NODI_RHILV NODULATION ATP-BINDING PROTEIN I >gi|78028|... 187 2e-46
pir||F82303 ABC transporter, ATP-binding protein VC0589 [importe... 185 6e-46
sp|P26050|NODI_BRAJA NODULATION ATP-BINDING PROTEIN I >gi|281683... 184 1e-45
sp|P42332|BCRA_BACLI BACITRACIN TRANSPORT ATP-BINDING PROTEIN BC... 184 1e-45
prf||1914270A nodulation protein [Bradyrhizobium japonicum] 183 2e-45
sp|P23703|NODI_RHILO NODULATION ATP-BINDING PROTEIN I >gi|95215|... 182 4e-45
pir||T31682 bcrA protein - Bacillus licheniformis >gi|4464278|gb... 181 1e-44
pir||T44443 gliding motility protein [imported] - Flavobacterium... 179 3e-44
sp|P54592|YHCH_BACSU HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 178 1e-43
gb|AAK41395.1| ABC transporter, ATP binding protein [Sulfolobus ... 177 1e-43
gi|11498898 ABC transporter, ATP-binding protein [Archaeoglobus ... 176 2e-43
pir||B72334 ABC transporter, ATP-binding protein - Thermotoga ma... 176 4e-43
pir||T07717 probable ABC-type transport protein T23J7.110 - Arab... 176 4e-43
dbj|BAB10070.1| (AB010069) contains similarity to ABC transporte... 176 4e-43
gb|AAC80570.1| (AF105431) NodI [Bradyrhizobium sp. SNU001] 175 7e-43
sp|P36879|YADG_ECOLI HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 174 1e-42
pir||S76626 ABC-type transport protein sll0489 - Synechocystis s... 173 2e-42
gi|11498736 ABC transporter, ATP-binding protein [Archaeoglobus ... 173 2e-42
pir||T36000 probable ABC-type transport system ATP-binding chain... 173 2e-42
pir||T07714 probable ABC-type transport protein T23J7.80 - Arabi... 173 3e-42
gb|AAF99566.1| (AF167161) unknown [Staphylococcus aureus] 172 4e-42
pir||T07713 probable ABC-type transport protein T23J7.70 - Arabi... 171 8e-42
dbj|BAB04164.1| (AP001508) ABC transporter (ATP-binding protein)... 171 1e-41
pir||H75077 abc transporter, ATP-binding protein PAB1696 - Pyroc... 170 2e-41
dbj|BAB10074.1| (AB010069) contains similarity to ABC transporte... 170 2e-41
gb|AAG20956.1| (AE005162) daunorubicin resistance ABC transporte... 170 2e-41
gb|AAF49312.2| (AE003523) CG6052 gene product [Drosophila melano... 170 2e-41
pir||JN0849 hypothetical 35K protein - Streptomyces lividans >gi... 169 4e-41
dbj|BAB07612.1| (AP001520) ABC transporter (ATP-binding protein)... 168 7e-41
pir||A75184 ATP-binding transport protein PAB0434 - Pyrococcus a... 168 1e-40
pir||G82993 probable ATP-binding/permease fusion ABC transporter... 168 1e-40
pir||S47705 hypothetical protein f648 - Escherichia coli >gi|912... 166 3e-40
sp|P37624|YHIH_ECOLI HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 166 3e-40
pir||JC5348 cdd4 protein - Clostridium difficile >gi|1770140|emb... 166 4e-40
gi|5915658 ATP-binding cassette, sub-family A member 1; ATP-bind... 165 6e-40
gb|AAF86276.1|AF275948_1 (AF275948) ABCA1 [Homo sapiens] 165 6e-40
gb|AAF98175.1|AF285167_1 (AF285167) ATP-binding cassette transpo... 165 6e-40
gi|11429275 ATP-binding cassette, sub-family A member 1 [Homo sa... 165 6e-40
gi|7304849 ATP-binding cassette 1, sub-family A, member 1 [Mus m... 165 7e-40
emb|CAB93668.1| (AJ276653) RumF protein [Ruminococcus gnavus] 165 7e-40
gb|AAG39073.1|AF287263_1 (AF287263) ATP-binding cassette 1, sub-... 165 7e-40
gb|AAD32038.1|AF093787_6 (AF093787) ABC transporter homolog CylA... 164 1e-39
emb|CAC11779.1| (AL445064) daunorubicin resistance protein relat... 164 2e-39
gb|AAK42768.1| ABC transporter, ATP binding protein [Sulfolobus ... 163 2e-39
pir||T18288 ABC transport protein - slime mold (Dictyostelium di... 163 2e-39
pir||E72364 ABC transporter, ATP-binding protein - Thermotoga ma... 163 3e-39
gb|AAG20087.1| (AE005088) ABC transport protein; Trp2 [Halobacte... 162 4e-39
pir||H71066 probable ATP-binding transport protein - Pyrococcus ... 162 5e-39
gb|AAG19009.1| (AE005000) daunorubicin resistance ABC transporte... 162 5e-39
pir||T07716 probable ABC-type transport protein T23J7.100 - Arab... 162 6e-39
emb|CAB60255.1| (AJ250862) MrsF protein [Bacillus sp. HIL-Y85/54... 161 8e-39
emb|CAC00243.1| (AL160371) possible ABC transporter [Leishmania ... 161 1e-38
gb|AAK43268.1| ABC transporter, ATP binding protein related prot... 160 2e-38
pir||A70082 ABC transporter (ATP-binding protein) homolog yxlF -... 160 2e-38
pir||A59189 ATP-binding cassette transporter - human (fragment) ... 160 2e-38
gb|AAG09372.1|AF178941_1 (AF178941) ATP-binding cassette sub-fam... 160 2e-38
dbj|BAB06933.1| (AP001518) ABC transporter (ATP-binding protein)... 160 2e-38
pir||S60124 transport protein homolog C48B4.4 - Caenorhabditis e... 159 3e-38
pir||T42749 ATP-binding cassette transport protein homolog - Cae... 159 3e-38
pir||A71243 probable maltose/maltodextrin transport ATP-binding ... 159 3e-38
sp|P34358|YLH4_CAEEL PUTATIVE ABC TRANSPORTER C48B4.4 IN CHROMOS... 159 3e-38
emb|CAA82383.2| (Z29117) contains similarity to Pfam domain: PF0... 159 3e-38
emb|CAA82384.2| (Z29117) contains similarity to Pfam domain: PF0... 159 3e-38
emb|CAB76006.1| (AL157916) putative ABC transporter, ATP-binding... 159 4e-38
dbj|BAB16596.1| (AB037937) ABC2 [Rattus norvegicus] 159 4e-38
pir||A70194 ABC transporter, ATP-binding protein homolog - Lyme ... 157 1e-37
pir||A75208 sugar transport ATP-binding protein. PAB2232 - Pyroc... 157 1e-37
gb|AAF49305.1| (AE003522) CG5944 gene product [Drosophila melano... 157 1e-37
gb|AAF49304.2| (AE003522) NUCB1 gene product [Drosophila melanog... 157 1e-37
dbj|BAB08166.1| (AB030831) SrtF [Streptococcus pyogenes] 157 2e-37
dbj|BAB04009.1| (AP001508) ABC transporter (ATP-binding protein)... 157 2e-37
pir||T22748 hypothetical protein F55G11.9 - Caenorhabditis elega... 156 3e-37
dbj|BAB04537.1| (AP001509) bacitracin ABC transporter (ATP-bindi... 156 3e-37
pir||G64435 cobalt transport ATP-binding protein O homolog - Met... 156 3e-37
gi|11498626 ABC transporter, ATP-binding protein [Archaeoglobus ... 156 3e-37
gb|AAK41557.1| Antibiotic ABC transporter, ATP binding protein [... 155 5e-37
gb|AAK42130.1| Antibiotic ABC transporter ATP binding protein [S... 155 6e-37
sp|P41234|ABC2_MOUSE ATP-BINDING CASSETTE TRANSPORTER 2 >gi|1082... 155 6e-37
pir||E70871 hypothetical protein Rv1458c - Mycobacterium tubercu... 155 8e-37
gb|AAC72253.1| (U91581) LctF [Lactococcus lactis subsp. lactis] 155 8e-37
pir||C83188 probable ATP-binding component of ABC transporter PA... 155 8e-37
pir||T33783 hypothetical protein Y39D8C.1 - Caenorhabditis elega... 154 1e-36
pir||T27121 hypothetical protein Y53C10A.9 - Caenorhabditis eleg... 154 1e-36
pir||S72783 probable ABC-type transport protein B1496_F3_97 - My... 153 2e-36
pir||T09008 cdd4-like protein ScnF - Streptococcus pyogenes >gi|... 153 2e-36
gb|AAC23915.1| (AF000148) ATP-binding cassette transporter [Homo... 153 2e-36
dbj|BAB04167.1| (AP001508) ABC transporter (ATP-binding protein)... 153 2e-36
gb|AAC05632.1| (AF001945) rim ABC transporter [Homo sapiens] 153 3e-36
emb|CAA75729.1| (Y15635) ABCR [Homo sapiens] 153 3e-36
sp|P78363|ABCR_HUMAN RETINAL-SPECIFIC ATP-BINDING CASSETTE TRANS... 153 3e-36
gi|11421340 ATP-binding cassette, sub-family A member 4 [Homo sa... 153 3e-36
gb|AAG35594.1|AF200948_1 (AF200948) ABC1 transporter [Leishmania... 152 4e-36
pir||C72303 ABC transporter, ATP-binding protein - Thermotoga ma... 152 7e-36
pir||A83142 probable ATP-binding component of ABC transporter PA... 151 1e-35
gi|4557876 ATP-binding cassette, sub-family A member 4; ATP bind... 150 2e-35
gi|6671495 ATP-binding cassette, sub-family A, member 4; ATP-bin... 150 2e-35
emb|CAC11986.1| (AL445065) ABC transporter cdd4-like protein Scn... 150 3e-35
gb|AAC48716.1| (U90126) ABC transporter [Bos taurus] 149 5e-35
pir||C75593 probable ABC transporter, ATP-binding protein - Dein... 149 5e-35
pir||A70039 ABC transporter (ATP-binding protein) homolog yvfR -... 148 8e-35
gb|AAG21390.1|AF302051_4 (AF302051) ABC transporter ATP binding ... 148 1e-34
gi|9506365 ATP-binding cassette, sub-family A (ABC1), member 7 [... 147 1e-34
gi|11427664 ATP-binding cassette, sub-family A (ABC1), member 7 ... 147 1e-34
sp|Q07756|NODI_AZOCA NODULATION ATP-BINDING PROTEIN I >gi|486720... 147 2e-34
pir||E69771 ABC transporter (ATP-binding protein) homolog ydbJ -... 147 2e-34
gb|AAK42548.1| ABC transporter, ATP binding protein [Sulfolobus ... 146 2e-34
sp|P74548|CYSA_SYNY3 SULFATE TRANSPORT ATP-BINDING PROTEIN CYSA ... 146 2e-34
pir||H75288 ABC transporter, ATP-binding protein - Deinococcus r... 146 2e-34
gb|AAF44814.1|AE003406_19 (AE003416) symbol=BG:DS00797.5; predic... 146 2e-34
emb|CAB95908.1| (AL359988) putative ABC transport system ATP-bin... 146 2e-34
gi|7524830 sulfate transport system permease protein [Chlorella ... 146 3e-34
pir||H70682 probable cysA - Mycobacterium tuberculosis (strain H... 145 5e-34
gb|AAC36155.1| (AF003632) PilH [Myxococcus xanthus] 145 5e-34
pir||G82707 ABC transporter ATP-binding protein XF1223 [imported... 145 5e-34
pir||H72301 ABC transporter, ATP-binding protein - Thermotoga ma... 145 7e-34
pir||T47150 hypothetical protein DKFZp547P193.1 - human (fragmen... 145 9e-34
gb|AAC44025.1| (U47133) NosF protein [Sinorhizobium meliloti] >g... 144 1e-33
pir||H71006 probable ATP-binding transport protein - Pyrococcus ... 144 2e-33
gb|AAD16030.1| (AF082183) ABC transporter MutF [Streptococcus mu... 144 2e-33
gb|AAG20473.1| (AE005119) copper transport ATP-binding protein; ... 144 2e-33
pir||T45265 cobalt transport ATP-binding protein O homolog [impo... 143 2e-33
gb|AAF99691.1|AF267498_1 (AF267498) MutF [Streptococcus mutans] 143 2e-33
pir||T36316 probable ABC-type transport system ATP-binding prote... 142 5e-33
pir||G75169 abc transporter ATP-binding protein PAB0350 - Pyroco... 142 5e-33
pir||E81337 ABC-transporter ATP-binding protein Cj0669 [imported... 142 5e-33
pir||G69043 cobalt transport ATP-binding protein O - Methanobact... 142 6e-33
gi|11499200 spermidine/putrescine ABC transporter, ATP-binding p... 141 8e-33
pir||G81344 ABC transport system ATP-binding protein Cj0732 [imp... 141 8e-33
emb|CAB94564.1| (AL359152) putative ABC transporter ATP-binding ... 141 8e-33
emb|CAB94566.1| (AL359152) putative ABC transporter ATP-binding ... 141 1e-32
pir||A75083 ATP-binding transport protein PAB1668 - Pyrococcus a... 140 2e-32
pir||H83609 sulfate transport protein CysA PA0280 [imported] - P... 140 2e-32
pir||T15200 hypothetical protein F12B6.1 - Caenorhabditis elegan... 140 2e-32
pir||H83240 probable ATP-binding component of ABC transporter PA... 140 2e-32
pir||E72378 sugar ABC transporter, ATP-binding protein - Thermot... 139 3e-32
pir||F72742 probable transport ATP-binding protein APE0471 - Aer... 139 3e-32
pir||G75124 abc-transporter ATP-binding protein PAB0545 - Pyroco... 139 3e-32
gi|11498288 glutamine ABC transporter, ATP-binding protein (glnQ... 139 5e-32
gb|AAC62423.1| (AF084104) NatA [Bacillus firmus] 139 5e-32
pir||T36764 probable ABC-type transport system ATP-binding prote... 139 5e-32
sp|P22040|Y415_SYNY3 HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 138 7e-32
gi|6005701 ATP-binding cassette, sub-family A member 8 [Homo sap... 138 1e-31
pir||F72756 probable multiple sugar-binding transport ATP-bindin... 138 1e-31
pir||B75082 phosphate abc transporter, ATP-binding protein (pstb... 137 2e-31
gi|10954682 probable mikimopine transporter gene~similar to potA... 137 2e-31
pir||C82266 ABC transporter, ATP-binding protein VC0907 [importe... 136 3e-31
pir||E71123 probable sugar transport ATP-binding protein - Pyroc... 136 4e-31
pir||D75187 probable maltose/maltodextrin transport ATP-binding ... 136 4e-31
pir||C71220 probable sugar-binding transport ATP-binding protein... 135 6e-31
dbj|BAA75396.1| (AB013378) YhaQ [Bacillus halodurans] 135 8e-31
gb|AAF81232.1| (AF263012) ABC transporter ATP binding protein [S... 135 8e-31
dbj|BAB04722.1| (AP001510) ABC transporter (ATP-binding protein)... 135 8e-31
gb|AAG19162.1| (AE005013) Vng0668c [Halobacterium sp. NRC-1] 135 8e-31
sp|P45073|YHBG_HAEIN PROBABLE ABC TRANSPORTER ATP-BINDING PROTEI... 134 1e-30
emb|CAB76078.1| (AL157953) putative ABC transporter ATP-binding ... 134 1e-30
emb|CAC08286.1| (AL392148) putative ABC transporter ATP-binding ... 133 2e-30
emb|CAC11378.1| (AL445063) gliding motility protein related [The... 132 4e-30
gb|AAB17558.1| (U72493) ATP binding protein [Chlamydia trachomatis] 131 1e-29
pir||G71486 probable ABC transporter ATPase - Chlamydia trachoma... 131 1e-29
gb|AAG20488.1| (AE005121) sulfate transport system ATP-binding p... 131 1e-29
dbj|BAB07815.1| (AB036417) CysA protein [Acetabularia acetabulum] 131 2e-29
pir||B64458 high-affinity branched-chain amino acid transport AT... 130 2e-29
pir||F71654 ABC transporter ATP-binding protein (abcT2) RP508 - ... 130 2e-29
pir||T36064 ABC-type transport system ATP-binding protein - Stre... 130 2e-29
pir||B75207 multiple sugar-binding transport ATP-binding protein... 130 2e-29
gb|AAB95372.1| (U75349) putative ABC transporter BitD [Brachyspi... 130 3e-29
sp|O52618|NODI_RHIME NODULATION ATP-BINDING PROTEIN I >gi|280954... 130 3e-29
gb|AAF33771.1|AF219259_4 (AF219259) YhbG [Haemophilus ducreyi] 130 3e-29
gb|AAF73520.1| (AE002271) ABC transporter, ATP-binding protein [... 130 3e-29
sp|P37774|YECC_ECOLI HYPOTHETICAL AMINO-ACID ABC TRANSPORTER ATP... 129 3e-29
pir||A72279 sugar ABC transporter, ATP-binding protein - Thermot... 129 3e-29
pir||E69162 sulfate transport system ATP-binding - Methanobacter... 129 5e-29
pir||E71045 probable ABC transporter - Pyrococcus horikoshii >gi... 129 5e-29
pir||E82210 amino acid ABC transporter, ATP-binding protein VC13... 129 6e-29
pir||H71241 probable multiple sugar-binding transport ATP-bindin... 128 8e-29
pir||A83621 probable ATP-binding component of ABC transporter PA... 128 8e-29
pir||G71905 probable ABC transporter, ATP-binding protein - Heli... 128 1e-28
gb|AAD51830.1|AF175299_5 (AF175299) ThuK [Sinorhizobium meliloti] 128 1e-28
pir||G69192 ABC transporter (glutamine transport ATP-binding pro... 127 1e-28
pir||H72356 amino acid ABC transporter, ATP-binding protein - Th... 127 2e-28
pir||H72555 probable transporter ATP-binding protein APE1732 - A... 127 2e-28
pir||H75151 abc transporter, ATP-binding protein PAB0249 - Pyroc... 127 2e-28
sp|P77795|YDCT_ECOLI HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 126 3e-28
pir||C64609 ABC transporter, ATP-binding protein - Helicobacter ... 126 3e-28
pir||C72044 ABC transporter ATPase - Chlamydophila pneumoniae (s... 126 3e-28
gi|11499064 ABC transporter, ATP-binding protein [Archaeoglobus ... 126 4e-28
pir||F82934 ABC transporter UU093 [imported] - Ureaplasma urealy... 125 5e-28
gb|AAF70304.1|AF259974_1 (AF259974) MalK [Vibrio cholerae] 125 5e-28
pir||A82398 maltose/maltodextrin ABC transporter, ATP-binding pr... 125 5e-28
pir||E83222 NosF protein PA3394 [imported] - Pseudomonas aerugin... 125 5e-28
sp|P19844|NOSF_PSEST COPPER TRANSPORT ATP-BINDING PROTEIN NOSF >... 125 9e-28
pir||H69746 ABC transporter (binding protein) homolog ybdA - Bac... 125 9e-28
pir||F82386 amino acid ABC transporter, ATP-binding protein VCA1... 124 1e-27
sp|P55604|Y4OS_RHISN PROBABLE ABC TRANSPORTER ATP-BINDING PROTEI... 123 3e-27
sp|O30506|AOTP_PSEAE ARGININE/ORNITHINE TRANSPORT ATP-BINDING PR... 123 3e-27
dbj|BAB06418.1| (AP001516) ABC transporter (ATP-binding protein)... 123 3e-27
gi|11498623 ABC transporter, ATP-binding protein [Archaeoglobus ... 123 3e-27
pir||S42925 probable transport protein - Staphylococcus aureus >... 122 4e-27
gb|AAG20232.1| (AE005098) phosphonates transport ATP-binding; Ph... 122 4e-27
sp|Q01937|LACK_AGRRD LACTOSE TRANSPORT ATP-BINDING PROTEIN LACK ... 122 6e-27
pir||H72272 sugar ABC transporter, ATP-binding protein - Thermot... 122 6e-27
gb|AAD24578.1|AF126010_1 (AF126010) trehalose/maltose transport ... 122 8e-27
pir||MMECMK inner membrane protein malK - Escherichia coli >gi|4... 122 8e-27
pir||G71192 probable cobalt transport ATP-binding protein - Pyro... 122 8e-27
gb|AAD23570.1|AF121946_1 (AF121946) maltose transport protein Ma... 122 8e-27
pir||E69098 phosphate transport system ATP-binding - Methanobact... 121 1e-26
gb|AAF57490.1| (AE003792) CG8908 gene product [Drosophila melano... 121 1e-26
gb|AAK42960.1| ABC transporter, ATP binding protein (glucose) [S... 121 1e-26
pir||E69812 ferrichrome ABC transporter (ATP-binding p) homolog ... 121 1e-26
gb|AAK42946.1| ABC transporter, ATP binding protein (branched ch... 120 2e-26
pir||G70022 iron(III) dicitrate transport permease homolog yusV ... 120 2e-26
pir||C65111 probable ABC transporter (ntrA/rpoN 5'region) - Esch... 120 2e-26
pir||F70032 ABC transporter (ATP-binding protein) homolog yvcR -... 120 2e-26
pir||H81391 amino-acid ABC transporter ATP-binding protein Cj046... 120 2e-26
sp|P02914|MALK_ECOLI MALTOSE/MALTODEXTRIN TRANSPORT ATP-BINDING ... 120 3e-26
sp|P31220|YHBG_ECOLI PROBABLE ABC TRANSPORTER ATP-BINDING PROTEI... 120 3e-26
emb|CAB60755.1| (Y18641) ATP-binding protein [Staphylococcus aur... 120 3e-26
gb|AAG20921.1| (AE005158) sn-glycerol-3-phosphate transport syst... 120 3e-26
pir||A70482 ABC transporter - Aquifex aeolicus >gi|2984331|gb|AA... 119 4e-26
pir||C72336 ABC transporter, ATP-binding protein - Thermotoga ma... 119 4e-26
sp|P45022|YA78_HAEIN PROBABLE AMINO-ACID ABC TRANSPORTER ATP-BIN... 119 5e-26
pir||E82065 ABC transporter, ATP-binding protein VC2528 [importe... 118 9e-26
emb|CAB99138.1| (AL390188) putative ABC transport system ATP-bin... 118 9e-26
gb|AAD03804.1| (AF047427) ATPase FbpC [Pasteurella haemolytica] 118 1e-25
pir||C72421 oligopeptide ABC transporter, ATP-binding protein - ... 118 1e-25
pir||D72415 zinc ABC transporter, ATP-binding protein - Thermoto... 118 1e-25
pir||A39025 probable membrane protein, cpn60 5'-region - Synecho... 117 2e-25
pir||S34187 probable ABC-type transport protein TnrB2 - Streptom... 117 2e-25
gi|10956099 ABC transporter subunit PenJ [Pediococcus pentosaceu... 114 2e-24
gi|9964444 AMV130 [Amsacta moorei entomopoxvirus] >gi|9944653|gb... 113 4e-24
gb|AAD09159.1| (AF047429) putative ATP/GTP binding protein NosF ... 111 1e-23
pir||H70610 probable ABC-typetransmembrane transport portein - M... 110 2e-23
pir||T14167 ABC transport protein - Mycobacterium smegmatis >gi|... 110 3e-23
gb|AAF48511.1| (AE003500) CG8473 gene product [Drosophila melano... 102 7e-21
pir||T34924 ABC transporter ATP binding protein - Streptomyces c... 95 9e-19
pir||E72314 ribose ABC transporter, ATP-binding protein - Thermo... 94 2e-18
sp|P77257|EGO_ECOLI PUTATIVE ABC TRANSPORTER ATP-BINDING PROTEIN... 91 2e-17
pir||T44856 molybdenum transport ATPase (EC 3.6.1.-) [imported] ... 90 2e-17
gb|AAF31434.1| (AF213395) ATP-binding cassette protein [Mus musc... 86 5e-16
gb|AAF31432.1| (AF213393) ATP-binding cassette protein [Mus musc... 77 3e-13
>pir||E75108 daunorubicin resistance ATP-binding protein (drra-1) PAB1923 -
Pyrococcus abyssi (strain Orsay)
>gi|5458093|emb|CAB49582.1| (AJ248285) daunorubicin
resistance ATP-binding protein (drrA-1) [Pyrococcus
abyssi]
Length = 328
Score = 661 bits (1686), Expect = 0.0
Identities = 328/328 (100%), Positives = 328/328 (100%)
Query: 1 MYAIEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKA 60
MYAIEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKA
Sbjct: 1 MYAIEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKA 60
Query: 61 IVAGHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLK 120
IVAGHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLK
Sbjct: 61 IVAGHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLK 120
Query: 121 FVELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTM 180
FVELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTM
Sbjct: 121 FVELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTM 180
Query: 181 KEEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVGNDIIYLKLESPKE 240
KEEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVGNDIIYLKLESPKE
Sbjct: 181 KEEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVGNDIIYLKLESPKE 240
Query: 241 ELKCLKADFIRGCKLLPDGRVRIDVENATEALPKLFELAQKNNVKILEVTYHRPTLNDVF 300
ELKCLKADFIRGCKLLPDGRVRIDVENATEALPKLFELAQKNNVKILEVTYHRPTLNDVF
Sbjct: 241 ELKCLKADFIRGCKLLPDGRVRIDVENATEALPKLFELAQKNNVKILEVTYHRPTLNDVF 300
Query: 301 LHLTGREIRDEEGGESFARVVMRARMRR 328
LHLTGREIRDEEGGESFARVVMRARMRR
Sbjct: 301 LHLTGREIRDEEGGESFARVVMRARMRR 328
>pir||C71081 probable resistance ATP-binding protein - Pyrococcus horikoshii
>gi|3257326|dbj|BAA30009.1| (AP000004) 324aa long
hypothetical resistance ATP-binding protein [Pyrococcus
horikoshii]
Length = 324
Score = 535 bits (1364), Expect = e-151
Identities = 261/309 (84%), Positives = 289/309 (93%), Gaps = 4/309 (1%)
Query: 3 AIEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAIV 62
AI VENLVKKYGDF AV+GISFKV++GEIFAFLGPNGAGKTTTVH+LTTLLKPTSG+AIV
Sbjct: 6 AIIVENLVKKYGDFEAVRGISFKVRRGEIFAFLGPNGAGKTTTVHMLTTLLKPTSGRAIV 65
Query: 63 AGHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKFV 122
AGHDVVKE +EVRKKIG+VFQDPS+DRELTA+ENMYIHG IYGLKG+ELK+KIEELLKFV
Sbjct: 66 AGHDVVKESREVRKKIGVVFQDPSVDRELTAWENMYIHGRIYGLKGQELKKKIEELLKFV 125
Query: 123 ELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMKE 182
ELW FKDR VKYFSGGMQRRLEIARALIHEPE+LFLDEPTIGLDPQTRAHIWEYI+TMKE
Sbjct: 126 ELWEFKDRQVKYFSGGMQRRLEIARALIHEPEVLFLDEPTIGLDPQTRAHIWEYIKTMKE 185
Query: 183 EHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVGNDIIYLKLESPKEEL 242
EH+MTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGT+EELKKLVGNDIIY+K E P
Sbjct: 186 EHDMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTAEELKKLVGNDIIYVKFEKP---- 241
Query: 243 KCLKADFIRGCKLLPDGRVRIDVENATEALPKLFELAQKNNVKILEVTYHRPTLNDVFLH 302
C++A+FIRGCK+L +GRV ++V+NA EALP +FE A++ +KILEVTYHRPTLNDVFLH
Sbjct: 242 TCIQAEFIRGCKVLNNGRVALEVKNAAEALPLVFEKAREMELKILEVTYHRPTLNDVFLH 301
Query: 303 LTGREIRDE 311
LTGREIRDE
Sbjct: 302 LTGREIRDE 310
>gi|11499468 daunorubicin resistance ATP-binding protein (drrA) [Archaeoglobus
fulgidus] >gi|7445660|pir||C69485 daunorubicin
resistance ATP-binding protein (drrA) homolog -
Archaeoglobus fulgidus >gi|2648659|gb|AAB89368.1|
(AE000972) daunorubicin resistance ATP-binding protein
(drrA) [Archaeoglobus fulgidus]
Length = 398
Score = 511 bits (1303), Expect = e-144
Identities = 247/328 (75%), Positives = 293/328 (89%), Gaps = 6/328 (1%)
Query: 1 MYAIEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKA 60
MYAIEVENLVKK+GDF AV+G+SFKVK+GEIFAFLGPNGAGKTTTVH+LTTLLKPTSGKA
Sbjct: 77 MYAIEVENLVKKFGDFEAVRGVSFKVKRGEIFAFLGPNGAGKTTTVHILTTLLKPTSGKA 136
Query: 61 IVAGHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLK 120
VAG DVV+E +EVR++IGIVFQDPS+DR+LTAYENM +HG +YGLKG+ELKEKIE LLK
Sbjct: 137 FVAGLDVVREAREVRRRIGIVFQDPSVDRDLTAYENMLVHGGVYGLKGKELKEKIERLLK 196
Query: 121 FVELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTM 180
FVELW F+D+ VKYFSGGMQRRLEIAR+L+H PE+LFLDEPTIGLDPQTRAH+W YI M
Sbjct: 197 FVELWEFRDKLVKYFSGGMQRRLEIARSLLHHPEVLFLDEPTIGLDPQTRAHVWSYIEAM 256
Query: 181 KEEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVGNDIIYLKLESPKE 240
KEE +MTIFLTTHYM+EAE+LADR+AIIDHG+IIAEG+ EELK+LVG+D++YLK+E+ E
Sbjct: 257 KEEQDMTIFLTTHYMEEAEKLADRVAIIDHGRIIAEGSVEELKRLVGSDVVYLKVENGAE 316
Query: 241 ELKCLKADFIRGCKLLPDGRVRIDVENATEALPKLFELAQKNNVKILEVTYHRPTLNDVF 300
C + + C +LPDGR+RIDV NA+EA+PK+FE+A++ V+ILEVTYHRPTLNDVF
Sbjct: 317 ---CFETG-LGNCVVLPDGRIRIDVSNASEAIPKIFEIAREKGVRILEVTYHRPTLNDVF 372
Query: 301 LHLTGREIRDEEGGESFARVVMRARMRR 328
LHLTGREIRD EGGE + ++RARMRR
Sbjct: 373 LHLTGREIRD-EGGE-LRKAIIRARMRR 398
>pir||D72257 hypothetical protein TM1403 - Thermotoga maritima (strain MSB8)
>gi|4981967|gb|AAD36474.1|AE001793_4 (AE001793)
antibiotic ABC transporter, ATP-binding protein,
putative [Thermotoga maritima]
Length = 327
Score = 488 bits (1244), Expect = e-137
Identities = 239/326 (73%), Positives = 279/326 (85%), Gaps = 4/326 (1%)
Query: 4 IEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAIVA 63
I VENLVKK+GDF AVKG+SF VKKGEIFAFLGPNGAGKTTT+H+LTTLLKPTSGKA VA
Sbjct: 5 IVVENLVKKFGDFEAVKGVSFSVKKGEIFAFLGPNGAGKTTTIHMLTTLLKPTSGKAWVA 64
Query: 64 GHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKFVE 123
GHDV+KEP+EVR+KIGIVFQD SLDRELTAYENMYIHG IYG G +LK++I ELL+FVE
Sbjct: 65 GHDVLKEPREVRRKIGIVFQDQSLDRELTAYENMYIHGKIYGYGGEKLKKRILELLEFVE 124
Query: 124 LWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMKEE 183
L FKD+PVK FSGGM RRLEIAR+LIHEPE+LFLDEPTIGLDP TRAH+WEYI MK+E
Sbjct: 125 LLEFKDKPVKTFSGGMARRLEIARSLIHEPEVLFLDEPTIGLDPHTRAHMWEYISKMKKE 184
Query: 184 HEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVGNDIIYLKLESPKEELK 243
H MTIFLTTHYMDEAEQLADR+AIIDHGKIIA GT ELK++VG +IIY++ E ++
Sbjct: 185 HNMTIFLTTHYMDEAEQLADRVAIIDHGKIIALGTPTELKRMVGKEIIYVRF---SEAVE 241
Query: 244 CLKADFIRGCKLLPDGRVRIDVENATEALPKLFELAQKNNVKILEVTYHRPTLNDVFLHL 303
CL+ DFI C+ LPDGR+ ++VE++ A+PK+FELAQ+ +KI E+TYH+PTLNDVFLHL
Sbjct: 242 CLEGDFIESCRKLPDGRLELNVEDSGRAIPKIFELAQQKGLKIEEITYHKPTLNDVFLHL 301
Query: 304 TGREIRDEEGGESFARVV-MRARMRR 328
TGRE+R+E SF + MR RMRR
Sbjct: 302 TGRELREEGPENSFKTMARMRMRMRR 327
>gb|AAK42315.1| ABC transporter, ATP binding protein. [Sulfolobus solfataricus]
Length = 339
Score = 309 bits (782), Expect = 4e-83
Identities = 158/329 (48%), Positives = 228/329 (69%), Gaps = 7/329 (2%)
Query: 3 AIEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAIV 62
AI+ NL K++G F AV I+F+V +GEIF FLGPNGAGK+TT+ +LTT+LKP+ G A V
Sbjct: 11 AIKAINLTKRFGKFVAVDHINFEVYEGEIFGFLGPNGAGKSTTIKMLTTVLKPSEGTATV 70
Query: 63 AGHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKFV 122
+G+DV+K+P VR+ IG+V Q+ + D +LT +ENM + +YG+ R +E+ +ELL+ V
Sbjct: 71 SGYDVIKQPALVRQSIGVVPQEYTADEDLTGWENMMMMAGLYGIPKRIAEERAKELLEMV 130
Query: 123 ELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMKE 182
EL R V+ +SGGM+RRLEIA +LI P ILFLDEPT+GLD QTRA IW+YI +KE
Sbjct: 131 ELTYAAKRKVETYSGGMRRRLEIAMSLISRPRILFLDEPTLGLDAQTRAAIWQYIMKLKE 190
Query: 183 EHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVGNDIIYLKLESPKEEL 242
E++MTIF+TTHY++EA+ DRIAIID GKI+A G+ +ELK+ VG D++ L+ + + +
Sbjct: 191 EYKMTIFVTTHYLEEADMYGDRIAIIDKGKILAIGSPKELKEKVGGDVVSLQTSNDELAI 250
Query: 243 KCLKA--DFIRGCKLLPDGRVRIDVENATEALPKLFELAQKNNVKILEVTYHRPTLNDVF 300
K + + D I + DG +RI V N E P++ E KN +K+ ++ PT+++V+
Sbjct: 251 KIISSSKDGILDVRKASDG-IRIKVRNGEEKAPEILESLVKNGIKVSRMSITEPTMDEVY 309
Query: 301 LHLTGREIRDEEGGE----SFARVVMRAR 325
+ TG+ +RDEE +F R + RAR
Sbjct: 310 MEFTGKSLRDEEASAQEMFAFRRTMRRAR 338
>pir||S74048 probable daunorubicin resistance protein - Sulfolobus solfataricus
>gi|1707742|emb|CAA69462.1| (Y08256) daunorubicin
resistance ATP-binding protein DrrA [Sulfolobus
solfataricus]
Length = 339
Score = 309 bits (782), Expect = 4e-83
Identities = 158/329 (48%), Positives = 228/329 (69%), Gaps = 7/329 (2%)
Query: 3 AIEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAIV 62
AI+ NL K++G F AV I+F+V +GEIF FLGPNGAGK+TT+ +LTT+LKP+ G A V
Sbjct: 11 AIKAINLTKRFGKFVAVDHINFEVYEGEIFGFLGPNGAGKSTTIKMLTTVLKPSEGTATV 70
Query: 63 AGHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKFV 122
+G+DV+K+P VR+ IG+V Q+ + D +LT +ENM + +YG+ R +E+ +ELL+ V
Sbjct: 71 SGYDVIKQPALVRQSIGVVPQEYTADEDLTGWENMMMMAGLYGIPKRIAEERAKELLEMV 130
Query: 123 ELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMKE 182
EL R V+ +SGGM+RRLEIA +LI P ILFLDEPT+GLD QTRA IW+YI +KE
Sbjct: 131 ELTYAAKRKVETYSGGMRRRLEIAMSLISRPRILFLDEPTLGLDAQTRAAIWQYIMKLKE 190
Query: 183 EHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVGNDIIYLKLESPKEEL 242
E++MTIF+TTHY++EA+ DRIAIID GKI+A G+ +ELK+ VG D++ L+ + + +
Sbjct: 191 EYKMTIFVTTHYLEEADMYGDRIAIIDKGKILAIGSPKELKEKVGGDVVSLQTSNDELAI 250
Query: 243 KCLKA--DFIRGCKLLPDGRVRIDVENATEALPKLFELAQKNNVKILEVTYHRPTLNDVF 300
K + + D I + DG +RI V N E P++ E KN +K+ ++ PT+++V+
Sbjct: 251 KIISSSKDGILDVRKASDG-IRIKVRNGEEKAPEILESLVKNGIKVSRMSITEPTMDEVY 309
Query: 301 LHLTGREIRDEEGGE----SFARVVMRAR 325
+ TG+ +RDEE +F R + RAR
Sbjct: 310 MEFTGKSLRDEEASAQEMFAFRRTMRRAR 338
>pir||D72492 probable ABC transporter ATP-binding protein APE2579 - Aeropyrum
pernix (strain K1) >gi|5106285|dbj|BAA81596.1|
(AP000064) 333aa long hypothetical ABC transporter
ATP-binding protein [Aeropyrum pernix]
Length = 333
Score = 285 bits (721), Expect = 6e-76
Identities = 144/311 (46%), Positives = 210/311 (67%), Gaps = 5/311 (1%)
Query: 4 IEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAIVA 63
+ E LVK YG F AV G+SF++ +GE+F+ LGPNGAGKTTT+ +L+TLL+PTSG+A +A
Sbjct: 10 VVAEELVKDYGGFRAVDGVSFRIARGELFSLLGPNGAGKTTTIKMLSTLLRPTSGEAWIA 69
Query: 64 GHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKFVE 123
G+ +V+EP VR+ IG+V QD + D E++ ++N+YI +YGL E +E+ E+L +++
Sbjct: 70 GYSIVREPGNVRRVIGLVPQDLTADDEMSGWDNVYIQARLYGLPSSEARERTREVLDYLD 129
Query: 124 LWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMKEE 183
L R V +SGGM+R+LEIA +L+H P++LFLDEPT+GLD +R +W YI +K
Sbjct: 130 LMEAAHRRVATYSGGMRRKLEIAMSLVHSPKVLFLDEPTLGLDVHSRRSLWRYIEDLKRS 189
Query: 184 HEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVGNDIIYLKLESPK--EE 241
+TI LTTHYM+EAE L+DR+AIID G+I+AEGT EELK V + +Y++L+ P+ E
Sbjct: 190 -AVTILLTTHYMEEAEMLSDRVAIIDRGRIVAEGTPEELKARVKGETVYIELKDPEYTEP 248
Query: 242 LKCLKADFIRGCKLLPDGRVRIDVENATEALPKLFELAQKNNVKILEVTYHRPTLNDVFL 301
L + + + +G+V + V+ A LP+L VK + +T R TL DVF+
Sbjct: 249 LVLALKEKLGLEPSVVEGKVAVRVDRADTLLPELARALNGFPVKAISIT--RATLEDVFI 306
Query: 302 HLTGREIRDEE 312
LTGR + E
Sbjct: 307 ELTGRTLGGSE 317
>pir||C69012 ABC transporter (ATP-binding, daunorubicin resistance) -
Methanobacterium thermoautotrophicum (strain Delta H)
>gi|2622194|gb|AAB85582.1| (AE000880) ABC transporter
(ATP-binding [Methanobacterium thermoautotrophicum]
Length = 312
Score = 277 bits (700), Expect = 2e-73
Identities = 137/310 (44%), Positives = 204/310 (65%), Gaps = 2/310 (0%)
Query: 2 YAIEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAI 61
+ IE E++ KKY +F AVKG++ +V +G I+ LGPNGAGKTT + +L T+L+PT G+
Sbjct: 3 HIIETEDIKKKYDEFLAVKGVNLRVPEGSIYGVLGPNGAGKTTLISMLCTILRPTGGRGT 62
Query: 62 VAGHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKF 121
V G+D+V++ ++VR+ IGIVFQ +LD LT E++ +H +YG+ +IEE+L+
Sbjct: 63 VNGYDIVRDARKVRESIGIVFQSRALDDILTGREHLEMHAALYGVPRDVRDRRIEEVLEL 122
Query: 122 VELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMK 181
+ L D VK +SGGM+RRLEI R LIH P +LFLDEPT+GLDPQTR IW YI +
Sbjct: 123 IALGDKADEYVKTYSGGMKRRLEIGRGLIHHPRVLFLDEPTLGLDPQTRESIWRYIEKLN 182
Query: 182 EEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVGNDIIYLKLESPKEE 241
E ++T+ LTTHYM+EA++L D +AI+ HG+II + LK+ +G D I ++++ +
Sbjct: 183 REEDVTVLLTTHYMEEADKLCDEVAIMSHGEIIKADSPGNLKRELGADTITVRVDRARGF 242
Query: 242 LKCL-KADFIRGCKLLPDGRVRIDVENATEALPKLFELAQKNNVKILEVTYHRPTLNDVF 300
+ L K D+++ L+ D V++ VE +P++ LA +NN + V PTL DVF
Sbjct: 243 HEILEKQDYVKEAYLM-DDEVKVLVERGENLVPEIVNLAARNNYYVRAVELEHPTLEDVF 301
Query: 301 LHLTGREIRD 310
+ TGR I +
Sbjct: 302 IKYTGRGISE 311
>pir||C71197 probable ATP-binding transport protein - Pyrococcus horikoshii
>gi|3258287|dbj|BAA30970.1| (AP000007) 318aa long
hypothetical ATP-binding transport protein [Pyrococcus
horikoshii]
Length = 318
Score = 275 bits (695), Expect = 6e-73
Identities = 158/331 (47%), Positives = 210/331 (62%), Gaps = 34/331 (10%)
Query: 1 MYAIEVENLVKKYGD-----------FTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVL 49
M IEV NL K Y F A+KGI+F+VKKGE+F LGPNGAGKTTT+ +L
Sbjct: 1 MNVIEVRNLRKLYPKKIPLPFRKVEWFEALKGITFRVKKGELFGLLGPNGAGKTTTIKIL 60
Query: 50 TTLLKPTSGKAIVAGHDVVKEPQEVRKKIGIVFQ-DPSLDRELTAYENMYIHGMIYGLKG 108
TTLL+P+SG+A V G DVVK+ +E+RK+I +V + + +L LTAYEN+ IY +
Sbjct: 61 TTLLEPSSGEAKVLGLDVVKDAREIRKRINLVAEGERTLYWRLTAYENLRYFASIYYIPR 120
Query: 109 RELKEKIEELLKFVELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQ 168
RE +++IEELLK V LW ++ V +S GM++RL IA+ALI++PE+LFLDEPT+GLD Q
Sbjct: 121 REAEKRIEELLKMVGLWDRRNDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQ 180
Query: 169 TRAHIWEYIRTMKEEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVGN 228
+ + E +R + +E T+ LTTHYM+EAE+L DRIAIIDHGKIIA T E LK++V N
Sbjct: 181 SAVFVRELVRRLVDEEGKTVLLTTHYMNEAEELCDRIAIIDHGKIIALNTPEGLKRMVRN 240
Query: 229 DIIYLKLESPKEELKCLKADFIRGCKLLPDGRVRIDVENAT---------EALPKLFELA 279
D I E++ + P G V++D N E +PKL E
Sbjct: 241 DTIV--------EVRVRNYPGVN-----PFGLVKVDDRNGVVILRGSLEEEEIPKLVEFL 287
Query: 280 QKNNVKILEVTYHRPTLNDVFLHLTGREIRD 310
K+N K+L V PTL DVF+ LTGR +RD
Sbjct: 288 VKSNAKVLSVEVKEPTLEDVFIKLTGRGLRD 318
>pir||H75157 daunorubicin resistance ATP-binding protein (drra-2) PAB2068 -
Pyrococcus abyssi (strain Orsay)
>gi|5457853|emb|CAB49343.1| (AJ248284) daunorubicin
resistance ATP-binding protein (drrA-2) [Pyrococcus
abyssi]
Length = 318
Score = 270 bits (683), Expect = 2e-71
Identities = 159/324 (49%), Positives = 210/324 (64%), Gaps = 20/324 (6%)
Query: 1 MYAIEVENLVKKYGD-----------FTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVL 49
M AIEV+NL K Y F A+KGI+F VKKGE+F LGPNGAGKTTT+ +L
Sbjct: 1 MKAIEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKIL 60
Query: 50 TTLLKPTSGKAIVAGHDVVKEPQEVRKKIGIVFQ-DPSLDRELTAYENMYIHGMIYGLKG 108
TTLL+PTSG+A V G D+VKE +E+RK+I +V + + +L LTAYEN+ IY +
Sbjct: 61 TTLLEPTSGEARVLGFDIVKEAREIRKRINLVAEGERTLYWRLTAYENLRYFASIYYVPK 120
Query: 109 RELKEKIEELLKFVELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQ 168
+ +E+I LL V LW KD V +S GM++RL IA+ALI++PE+LFLDEPT+GLD Q
Sbjct: 121 KVAEERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQ 180
Query: 169 TRAHIWEYIRTMKEEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVGN 228
+ + E I+ + EE + T+ LTTHYM EAE+L DRIAIIDHG+IIA T E LKKLV
Sbjct: 181 SAIFVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRIIALDTPEGLKKLVRK 240
Query: 229 D-IIYLKLESPKEELKCLKADFIRGCKLLPDG-RVRIDVENATEALPKLFELAQKNNVKI 286
D I+ +++++ E A K+ +G +V + E +PKL E KNN K+
Sbjct: 241 DTIVEVRVKNYNGENPFGLA------KIKEEGEKVVLRGPLDEEDIPKLVEFLVKNNAKV 294
Query: 287 LEVTYHRPTLNDVFLHLTGREIRD 310
L V PTL DVF+ LTGR +RD
Sbjct: 295 LSVEVKEPTLEDVFIKLTGRGLRD 318
>emb|CAC11998.1| (AL445065) ABC transporter related protein [Thermoplasma
acidophilum]
Length = 334
Score = 264 bits (668), Expect = 9e-70
Identities = 131/326 (40%), Positives = 212/326 (64%), Gaps = 1/326 (0%)
Query: 4 IEVENLVKKY-GDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAIV 62
I+ ENL K Y G AV G++ ++++ EI+ LG NGAGKTTT+ +LTT + PTSG AI+
Sbjct: 9 IKTENLTKIYPGGIKAVDGLNIEIEEAEIYGLLGKNGAGKTTTIKMLTTAIDPTSGNAII 68
Query: 63 AGHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKFV 122
G+D+ K+ +++R+ IG+V QD + D +L EN+ + Y + +E +++I++LL+ V
Sbjct: 69 GGYDLRKDKEKIRRIIGVVPQDLTTDADLKGVENLRMIASFYNIPKQEAEQRIKDLLEIV 128
Query: 123 ELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMKE 182
+L + ++ V +SGGM++RLE+ L++ P+ILFLDEPT+GLD TR+ +W+YIR +++
Sbjct: 129 DLSDWGNKYVSQYSGGMRKRLELICGLVNSPKILFLDEPTLGLDVNTRSKMWKYIRDIQK 188
Query: 183 EHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVGNDIIYLKLESPKEEL 242
E +TI LT+HY++E +QLADRI+IIDHGKI+ GT + LK + D+I ++ S ++
Sbjct: 189 ELGVTIILTSHYLEEVDQLADRISIIDHGKILITGTPDSLKASLKGDVITMEFNSMEDAE 248
Query: 243 KCLKADFIRGCKLLPDGRVRIDVENATEALPKLFELAQKNNVKILEVTYHRPTLNDVFLH 302
++ D +VR+ VEN+ LPK+ E + NV + + +P+L++VFL
Sbjct: 249 LARSYPGSLEASVMGDAKVRMKVENSDTELPKILEYLLEKNVSPITINVKKPSLDEVFLE 308
Query: 303 LTGREIRDEEGGESFARVVMRARMRR 328
TG I ++ E F R++ R R
Sbjct: 309 YTGSSIEEDIDPEQFRRMMQNVRRLR 334
>dbj|BAB04773.1| (AP001510) transposase (08)/ABC transporter (ATP-binding protein)
[Bacillus halodurans]
Length = 901
Score = 255 bits (644), Expect = 6e-67
Identities = 134/310 (43%), Positives = 200/310 (64%), Gaps = 4/310 (1%)
Query: 4 IEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAIVA 63
IEV +L K Y + VKGI+ ++KGE+ LGPNGAGK+TT+ ++++L++PTSG ++
Sbjct: 593 IEVIDLSKTYRNRQVVKGINMFIEKGEMVGLLGPNGAGKSTTISMISSLIQPTSGDVLIK 652
Query: 64 GHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKFVE 123
G + K+ + +R +G+V Q+ ++ +LTA EN+ G IYGLKG ELK ++E L+ V
Sbjct: 653 GGSIHKQSKAIRSILGVVPQEIAVYHDLTARENLAFFGKIYGLKGEELKHRMESTLQLVG 712
Query: 124 LWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMKEE 183
L ++ V FSGGM+RRL IA AL+HEPE++ +DEPT+G+DPQ+R+HI E ++T+ +E
Sbjct: 713 LEERQNDRVHTFSGGMKRRLNIAVALLHEPELIIMDEPTVGIDPQSRSHILETVKTLNQE 772
Query: 184 HEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLV-GNDIIYLKLE--SPKE 240
EMT+ T+HYM+E E L DR+ I+D G++IA GT +E+K ++ N I L E SP+
Sbjct: 773 REMTVIYTSHYMEEVEYLCDRLYIMDRGEVIASGTKDEVKGILSSNQSIKLTTEMYSPRF 832
Query: 241 ELKCLKADFIRGCKLLPDGRVRIDVENATEALPKLFELAQKNNVKILEVTYHRPTLNDVF 300
I K++ + I V L LF LA++ + + PTL DVF
Sbjct: 833 LTALQDHPVISSVKVM-EQTFTIIVPKRENILDDLFMLAKETGTTLKSIDIQAPTLEDVF 891
Query: 301 LHLTGREIRD 310
LHLTGR++RD
Sbjct: 892 LHLTGRKLRD 901
>dbj|BAA83955.1| (AB024563) YFIL [Bacillus halodurans]
Length = 310
Score = 254 bits (642), Expect = 1e-66
Identities = 134/310 (43%), Positives = 199/310 (63%), Gaps = 4/310 (1%)
Query: 4 IEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAIVA 63
IEV +L K Y + VKGI+ ++KGE+ LGPNGAGK+TT+ ++++L++PTSG ++
Sbjct: 2 IEVIDLSKTYRNRQVVKGINMFIEKGEMVGLLGPNGAGKSTTISMISSLIQPTSGDVLIK 61
Query: 64 GHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKFVE 123
G + K + +R +G+V Q+ ++ +LTA EN+ G IYGLKG ELK ++E L+ V
Sbjct: 62 GGSIHKRSKAIRSILGVVPQEIAVYHDLTARENLAFFGKIYGLKGEELKHRMESTLQLVG 121
Query: 124 LWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMKEE 183
L ++ V FSGGM+RRL IA AL+HEPE++ +DEPT+G+DPQ+R+HI E ++T+ +E
Sbjct: 122 LEERQNDRVHTFSGGMKRRLNIAVALLHEPELIIMDEPTVGIDPQSRSHILETVKTLNQE 181
Query: 184 HEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLV-GNDIIYLKLE--SPKE 240
EMT+ T+HYM+E E L DR+ I+D G++IA GT +E+K ++ N I L E SP+
Sbjct: 182 REMTVIYTSHYMEEVEYLCDRLYIMDRGEVIASGTKDEVKGILSSNQSIKLTTEMYSPRF 241
Query: 241 ELKCLKADFIRGCKLLPDGRVRIDVENATEALPKLFELAQKNNVKILEVTYHRPTLNDVF 300
I K++ + I V L LF LA++ + + PTL DVF
Sbjct: 242 LTALQDHPVISSVKVM-EQTFTIIVPKRENILDDLFMLAKETGTTLKSIDIQAPTLEDVF 300
Query: 301 LHLTGREIRD 310
LHLTGR++RD
Sbjct: 301 LHLTGRKLRD 310
>dbj|BAB05817.1| (AP001514) ABC transporter (ATP-binding protein) (daunorubicin
resistance) [Bacillus halodurans]
Length = 310
Score = 247 bits (624), Expect = 1e-64
Identities = 126/315 (40%), Positives = 199/315 (63%), Gaps = 14/315 (4%)
Query: 4 IEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAIVA 63
+E NL K + AV+ ++ + GE LGPNGAGK+TT+ +++TL+KPTSG+ +
Sbjct: 2 LETINLCKTFKGQPAVQEVNMYLNSGESVGLLGPNGAGKSTTISMISTLIKPTSGEIKLN 61
Query: 64 GHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKFVE 123
G +++ P ++RK +G+V Q+ +L +EL+AYEN+ G Y +KG+ L+ +I+ L+ V
Sbjct: 62 GINIISHPGDIRKILGVVPQELALYQELSAYENLKFFGSTYKMKGKHLENRIQHALEIVG 121
Query: 124 LWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMKEE 183
L + VK FSGGM+RR+ IA AL+HEP+IL LDEPT+G+DPQ+R HI E +RT+ E
Sbjct: 122 LKDRQKDLVKTFSGGMKRRINIAAALLHEPKILILDEPTVGIDPQSRNHILETVRTLNEN 181
Query: 184 HEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVGNDIIYLKLESPKEELK 243
T+ T+HYM+E EQL DR+ I+DHG+IIA GT EEL ++ + ++ K EL
Sbjct: 182 EGTTVLYTSHYMEEVEQLCDRLYIMDHGEIIAAGTKEELLSILSTE------DTIKVELS 235
Query: 244 CLKADFIRGCKLLPDGR--------VRIDVENATEALPKLFELAQKNNVKILEVTYHRPT 295
+ F++ K++ R +++ + + + +L L ++ ++++ P+
Sbjct: 236 KIDETFVQNVKMIEGVRKVEASHSQLKMIAKKGSHLIRELVHLTDQHQIQMIHFHTETPS 295
Query: 296 LNDVFLHLTGREIRD 310
L DVFLHLTGR +RD
Sbjct: 296 LEDVFLHLTGRTLRD 310
>gb|AAG32068.1|AF317790_1 (AF317790) ATP-binding transporter AviABCI [Streptomyces
viridochromogenes]
Length = 323
Score = 244 bits (617), Expect = 9e-64
Identities = 133/315 (42%), Positives = 196/315 (62%), Gaps = 7/315 (2%)
Query: 3 AIEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAIV 62
A+ E L K YG TA+ G V +G + A LGPNGAGKTT V +L+TLLKP G+A+V
Sbjct: 8 ALVAEGLRKTYGSETALDGFDLVVPEGTVCALLGPNGAGKTTAVRILSTLLKPDGGRALV 67
Query: 63 AGHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKFV 122
AG DV +E EVR+ IG+ Q P+++ LT EN+ + G +Y + RE + + EELL+
Sbjct: 68 AGLDVTREAAEVRRNIGVTGQYPAVEEILTGRENLEMWGRLYHVGRREAQRRTEELLEQF 127
Query: 123 ELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMKE 182
+L D+ +K++SGGM+RRL++A P++LFLDEPT GLDP+ R +W+ +R+M E
Sbjct: 128 DLTEAADKRLKHYSGGMRRRLDLAAGFFTVPKVLFLDEPTTGLDPRNRNEVWKMVRSMVE 187
Query: 183 EHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVGNDIIYLKLESPKEEL 242
+ T+ LTT Y++EA++LAD+I++ID G+ + EGT E LK LVG D I + L + E+L
Sbjct: 188 Q-GTTVLLTTQYLEEADRLADQISVIDAGRGVVEGTPETLKSLVGGDRIVVTL-AATEDL 245
Query: 243 KCLKADFIRGCKLLPD-----GRVRIDVENATEALPKLFELAQKNNVKILEVTYHRPTLN 297
A R P+ R+ V + L ++ +L + +++V+ RPTL+
Sbjct: 246 SAAAAQVARFTGTEPEVDAEARRIDAPVRDRVGDLVEIVQLLRGQGHGVVDVSLRRPTLD 305
Query: 298 DVFLHLTGREIRDEE 312
DVFLH T R R +E
Sbjct: 306 DVFLHATNRAGRRKE 320
>gb|AAD44229.1|AF143772_35 (AF143772) DrrA [Mycobacterium avium]
Length = 315
Score = 236 bits (597), Expect = 2e-61
Identities = 126/309 (40%), Positives = 193/309 (61%), Gaps = 4/309 (1%)
Query: 3 AIEVENLVKKYGDFT-AVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAI 61
AIEVE L KK+G T A+ G+ F V G + LG NGAGKTTT+++L+TL++PTSG+A
Sbjct: 5 AIEVEGLTKKFGGSTVALAGVDFSVPAGTVCGLLGHNGAGKTTTINILSTLIRPTSGRAS 64
Query: 62 VAGHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKF 121
VAGHDVV+ P EVR IG+ Q LD LT EN+ + + GL R K + +ELL+
Sbjct: 65 VAGHDVVRRPAEVRASIGMAGQFTGLDPMLTGRENLVLFSRLRGLNRRRAKARADELLEQ 124
Query: 122 VELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMK 181
L DR + +SGGM RR+++A AL+ P++LFLDEPT GLDP++R +W + +++
Sbjct: 125 FNLVDAADRRLSTYSGGMFRRVDLASALVVPPKVLFLDEPTTGLDPRSRRDVWALVSSLR 184
Query: 182 EEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVGNDIIYLKLESPKEE 241
+ +T+ LTT Y++EA+ L+D I +IDHG++IA GTSEELK+ VG + +P +
Sbjct: 185 VQ-GITVLLTTQYLEEADVLSDSIVVIDHGRVIASGTSEELKRAVGTSYCQVTPANPADL 243
Query: 242 LKCLKA-DFIRGCKLLPD-GRVRIDVENATEALPKLFELAQKNNVKILEVTYHRPTLNDV 299
+ + + G + D G V + + L ++F +++ +++ +P+L++
Sbjct: 244 PQVVATLTGLDGVDIDNDTGSVSVFAPDGVATLVEVFRRVDALGLELADISLRKPSLDEA 303
Query: 300 FLHLTGREI 308
FLHLT R +
Sbjct: 304 FLHLTERTV 312
>pir||T36344 probable ABC-type transport system ATP-binding protein -
Streptomyces coelicolor >gi|4808357|emb|CAB42771.1|
(AL049841) putative ABC transporter ATP-binding
component [Streptomyces coelicolor A3(2)]
Length = 315
Score = 234 bits (590), Expect = 1e-60
Identities = 126/305 (41%), Positives = 191/305 (62%), Gaps = 2/305 (0%)
Query: 3 AIEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAIV 62
AI VE K+YG +A+ G+ V +G + LGPNGAGKTT V +L+TLL+P +G+ V
Sbjct: 7 AITVEGARKEYGSKSALDGLDLTVTRGTVHGVLGPNGAGKTTLVRILSTLLRPDAGRVEV 66
Query: 63 AGHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKFV 122
AGHDVV E VR +IG++ Q +LD EL +N+ + G ++ L R + + +ELL
Sbjct: 67 AGHDVVAEAYAVRLRIGLLGQHAALDEELGGRQNLEMFGRLHHLGARGARARADELLVRF 126
Query: 123 ELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMKE 182
L +PV +SGGM+RRL++A +LI EPE+LFLDEPT GLDP+ RA +W+ +R++
Sbjct: 127 GLSDTGRKPVGAYSGGMRRRLDLAASLITEPEVLFLDEPTTGLDPRGRAEVWDSVRSLVG 186
Query: 183 EHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVGNDIIYLKLESPKEEL 242
T+ LTT Y++EA+QLADRI+++D G+++A+GT++ELK G D + + L
Sbjct: 187 A-GTTVLLTTQYLEEADQLADRISVVDAGRVVADGTADELKAATGGDRVDVVLRDAGHLG 245
Query: 243 KCLKADFIRGCKLLPDGR-VRIDVENATEALPKLFELAQKNNVKILEVTYHRPTLNDVFL 301
+ + G ++ PD R + V + AL + ++ ++ +V RPTL++VFL
Sbjct: 246 AAVALLPLTGVRVDPDRRLLSAPVTDRMAALSGVVRALEEAGIEAEDVALRRPTLDEVFL 305
Query: 302 HLTGR 306
HLT R
Sbjct: 306 HLTDR 310
>gb|AAD20382.1| (AF125999) daunorubicin resistance protein A [Mycobacterium avium]
Length = 315
Score = 233 bits (587), Expect = 3e-60
Identities = 125/309 (40%), Positives = 190/309 (61%), Gaps = 4/309 (1%)
Query: 3 AIEVENLVKKYGDFT-AVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAI 61
AIEVE L KK+G T A+ G+ F V G + LG NGAGKTTT+++L+TL++PTSG+
Sbjct: 5 AIEVEGLTKKFGGSTVALAGVDFSVPAGTVCGLLGHNGAGKTTTINILSTLIRPTSGRGN 64
Query: 62 VAGHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKF 121
VAGHDVV P EVR IG+ Q LD LT EN+ + + GL R K + +ELL+
Sbjct: 65 VAGHDVVARPAEVRANIGMAGQFTGLDPMLTGRENLVLFSRLRGLNRRRAKARADELLEQ 124
Query: 122 VELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMK 181
L DR + +SGGM RR+++A AL+ P++LFLDEPT GLDP++R +W + +++
Sbjct: 125 FNLVDAADRRLSTYSGGMFRRVDLASALVVPPKVLFLDEPTTGLDPRSRRDVWALVSSLR 184
Query: 182 EEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVGNDIIYLKLESPKEE 241
+ +T+ LTT Y++EA+ L+D I +IDHG++IA GTSEELK+ VG + +P +
Sbjct: 185 VQ-GITVLLTTQYLEEADVLSDSIVVIDHGRVIASGTSEELKRAVGTSYCQVTPANPADL 243
Query: 242 LKCLKA-DFIRGCKLLPD-GRVRIDVENATEALPKLFELAQKNNVKILEVTYHRPTLNDV 299
+ + + G + D G V + + L ++F +++ ++ +P+L++
Sbjct: 244 PQVVATLTGLDGVDIDNDTGSVSVFAPDGVATLVEVFRRVDALGLELADILLRKPSLDEA 303
Query: 300 FLHLTGREI 308
FLHLT R +
Sbjct: 304 FLHLTERTV 312
>sp|P32010|DRRA_STRPE DAUNORUBICIN RESISTANCE ATP-BINDING PROTEIN DRRA
>gi|625935|pir||S27707 daunorubicin resistance protein -
Streptomyces peucetius >gi|153230|gb|AAA74717.1|
(M73758) daunorubicin resistance protein [Streptomyces
peucetius]
Length = 330
Score = 231 bits (582), Expect = 1e-59
Identities = 127/320 (39%), Positives = 196/320 (60%), Gaps = 10/320 (3%)
Query: 3 AIEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAIV 62
AIE LVK Y AV G+ V G ++ LGPNGAGK+TT+ +L TLL+P G A V
Sbjct: 8 AIETSGLVKVYNGTRAVDGLDLNVPAGLVYGILGPNGAGKSTTIRMLATLLRPDGGTARV 67
Query: 63 AGHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKFV 122
GHDV EP VR++I + Q S+D LT EN+ + G + G +E+ EL+
Sbjct: 68 FGHDVTSEPDTVRRRISVTGQYASVDEGLTGTENLVMMGRLQGYSWARARERAAELIDGF 127
Query: 123 ELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMKE 182
L +DR +K +SGGM+RRL+IA +++ P++LFLDEPT GLDP++R +W+ +R + +
Sbjct: 128 GLGDARDRLLKTYSGGMRRRLDIAASIVVTPDLLFLDEPTTGLDPRSRNQVWDIVRALVD 187
Query: 183 EHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVGNDIIYLKL---ESPK 239
T+ LTT Y+DEA+QLADRIA+IDHG++IAEGT+ ELK +G++++ L+L +S
Sbjct: 188 A-GTTVLLTTQYLDEADQLADRIAVIDHGRVIAEGTTGELKSSLGSNVLRLRLHDAQSRA 246
Query: 240 EELKCLKADFIRGCKLLPDG---RVRIDVENATEALPKLFELAQKNNVKILEVTYHRPTL 296
E + L A+ G + D + +++ + + L EL+ + ++++ + + +L
Sbjct: 247 EAERLLSAEL--GVTIHRDSDPTALSARIDDPRQGMRALAELS-RTHLEVRSFSLGQSSL 303
Query: 297 NDVFLHLTGREIRDEEGGES 316
++VFL LTG D E+
Sbjct: 304 DEVFLALTGHPADDRSTEEA 323
>pir||T50566 probable ABC-type transport protein, ATP-binding component
[imported] - Streptomyces coelicolor
>gi|6469242|emb|CAB61703.1| (AL133220) probable ABC
transporter, ATP-binding component. [Streptomyces
coelicolor A3(2)]
Length = 365
Score = 229 bits (577), Expect = 4e-59
Identities = 123/311 (39%), Positives = 189/311 (60%), Gaps = 11/311 (3%)
Query: 3 AIEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAIV 62
A+ V LVK YG+ A+ G+ V++G + LGPNGAGKTT V +L+TL+ P SG+A V
Sbjct: 36 AVTVRGLVKHYGETKALDGVDLDVREGTVMGVLGPNGAGKTTLVRILSTLITPDSGQAHV 95
Query: 63 AGHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKFV 122
AG+DVV++P+++R+ IG+ Q S+D +L +EN+Y+ G + L R+ + + +ELL+
Sbjct: 96 AGYDVVRQPRQLRRVIGLTGQYASVDEKLPGWENLYMIGRLLDLSRRDARTRADELLERF 155
Query: 123 ELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMKE 182
L RP +SGGM+RRL++A ++I P +LFLDEPT GLDP+TR +W+ ++ M
Sbjct: 156 SLTEAGKRPASTYSGGMRRRLDLAASMIGHPAVLFLDEPTTGLDPRTRNEVWDEVKRMVG 215
Query: 183 EHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVGNDIIYLKLESPKEEL 242
+ +T+ LTT YM+EAEQLA + ++D GK+IA G EELK VG + ++ P +L
Sbjct: 216 D-GVTVLLTTQYMEEAEQLASELTVVDRGKVIANGGIEELKAKVGGRTLRIRPADPL-QL 273
Query: 243 KCLKADFIRGCKLLPDGRVRIDVENATEALPKLFE--------LAQKNNVKILEVTYHRP 294
+ L A ++ + +D E T +P L + + + VT P
Sbjct: 274 RPLAA-YLDELGITGLASSTVDTERGTVLVPILSDEQLTAVVGAVTARGITVSAVTTELP 332
Query: 295 TLNDVFLHLTG 305
+L++VFL LTG
Sbjct: 333 SLDEVFLSLTG 343
>emb|CAC08315.1| (AL392149) putative ABC transport system ATP-binding protein
[Streptomyces coelicolor A3(2)]
Length = 336
Score = 227 bits (572), Expect = 2e-58
Identities = 124/309 (40%), Positives = 187/309 (60%), Gaps = 7/309 (2%)
Query: 2 YAIEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAI 61
+A+ E L K+YGD A+ G V++G + LGPNGAGKTT V +L+TL++ G+A
Sbjct: 5 HAVRAEGLEKRYGDKRALDGFDLTVREGTVHGLLGPNGAGKTTAVRILSTLIRLDGGRAE 64
Query: 62 VAGHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKF 121
VAG D+ ++ +EVR +IG+ Q ++D LT +N+ + G ++ L GR + + ELL+
Sbjct: 65 VAGLDIARQAREVRARIGLTGQYAAVDEVLTGRQNLEMFGRLFHLGGRRARARAVELLEQ 124
Query: 122 VELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMK 181
+L DR V +SGGM+RRL++A ++I P +LFLDEPT GLDP++R +WE +R +
Sbjct: 125 FDLTDAADRGVGKYSGGMRRRLDLAASMILAPSVLFLDEPTTGLDPRSRGEVWESVRELV 184
Query: 182 EEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVGNDIIYLKLESPKEE 241
T+ LTT Y++EA++LA RI +ID G+ IA+ T + LK LVG D I + + E
Sbjct: 185 AS-GTTVLLTTQYLEEADKLASRITVIDRGRAIADDTPDGLKNLVGGDRIEVVVADHAEI 243
Query: 242 LKCLKADFIRGCKLLPDG-----RVRIDVENATEALPKLFELAQKNNVKILEVTYHRPTL 296
+ +K R CK P+ RV V + AL ++ Q V + ++ RP+L
Sbjct: 244 PRVVKT-VARVCKGEPEVEEEALRVHAPVTDRVPALTEVARTLQDEGVAVEDIGLRRPSL 302
Query: 297 NDVFLHLTG 305
+DVFL LTG
Sbjct: 303 DDVFLRLTG 311
>pir||G69803 ABC transporter (ATP-binding protein) homolog yfiL - Bacillus
subtilis >gi|1817536|dbj|BAA11402.1| (D78508) YfiL
[Bacillus subtilis] >gi|2633155|emb|CAB12660.1| (Z99108)
similar to ABC transporter (ATP-binding protein)
[Bacillus subtilis]
Length = 311
Score = 226 bits (571), Expect = 2e-58
Identities = 127/311 (40%), Positives = 193/311 (61%), Gaps = 5/311 (1%)
Query: 4 IEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAIVA 63
++ EN+ K YG T VKGISF +KKGE F LGPNGAGK+TT+ +++ L+ SG V
Sbjct: 2 LQAENIKKAYGKKTIVKGISFSLKKGESFGLLGPNGAGKSTTISMISGLVPHDSGNITVG 61
Query: 64 GHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKFVE 123
G+ + KE + ++KIGIV Q+ +L LTA+EN+ G +YGL E K++ E+L++V
Sbjct: 62 GYVIGKETAKAKQKIGIVPQEIALYPTLTAHENLMFWGKMYGLTHDEAKKRAAEVLEYVG 121
Query: 124 LWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMKEE 183
L ++ FSGGM+RR+ I AL+H+PE+L +DEPT+G+DPQ+R HI E ++ + E
Sbjct: 122 LTERAKDKIETFSGGMKRRINIGAALMHKPELLIMDEPTVGIDPQSRNHILETVKQLNET 181
Query: 184 HEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEEL-KKLVGNDIIYLKLESPKEE- 241
MT+ T+HYM+E E L DRI IID G++IA GT +L +L G+ II L + E
Sbjct: 182 -GMTVIYTSHYMEEVEFLCDRIGIIDQGEMIAIGTKTDLCSRLGGDTIIQLTVSGINEAF 240
Query: 242 LKCLKADFIRGCKLLPDGRVRIDVENA--TEALPKLFELAQKNNVKILEVTYHRPTLNDV 299
L +++ + + ++ID+ A + + L A +++ +L + P L +
Sbjct: 241 LVAIRSLAHVNDVTVHELELKIDISAAHHEKVVTSLLAEATAHHINLLSLQVQEPNLERL 300
Query: 300 FLHLTGREIRD 310
FL+LTGR +RD
Sbjct: 301 FLNLTGRTLRD 311
>pir||T36505 probable ABC-type transport system ATP-binding component -
Streptomyces coelicolor >gi|5457259|emb|CAB46947.1|
(AL096822) putative ABC-transporter ATP-binding
component [Streptomyces coelicolor A3(2)]
Length = 342
Score = 226 bits (569), Expect = 4e-58
Identities = 131/325 (40%), Positives = 193/325 (59%), Gaps = 14/325 (4%)
Query: 3 AIEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAIV 62
AIE LVK +G+ AV G+ V G ++ LGPNGAGKTTTV +L TLL+P G A V
Sbjct: 9 AIETAGLVKTFGETRAVDGVDLAVPAGTVYGVLGPNGAGKTTTVKMLATLLRPDGGHARV 68
Query: 63 AGHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKFV 122
GHDVV E EVR ++ + Q S+D +LT EN+ + G + G +E+ ++LL
Sbjct: 69 FGHDVVHEADEVRGRVSLTGQYASVDEDLTGTENLVLLGRLLGHGKAAARERGDQLLAAF 128
Query: 123 ELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMKE 182
L + VK++SGGM+RR++IA ++++ P++LFLDEPT GLDP++R +W+ +R +
Sbjct: 129 GLTDAAAKQVKHYSGGMRRRIDIAASILNTPDLLFLDEPTTGLDPRSRNQVWDIVRAVVA 188
Query: 183 EHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVGNDIIYLKL---ESPK 239
+ T+ LTT Y+DEA+QLA RIA+ID G++IAEGT ELK VG ++L+L E
Sbjct: 189 Q-GTTVLLTTQYLDEADQLASRIAVIDKGRVIAEGTKGELKASVGAGSVHLRLRDAEERP 247
Query: 240 EELKCLKADFIRGCKLLPD--------GRVRIDVENATEALPKLFELAQKNNVKILEVTY 291
E + L+ + + PD G D A +A L ELA + + + +
Sbjct: 248 EAERVLRNLLVAEVQPEPDPVALTARLGAAASDTA-ADQAAKALGELA-RAGITVDSFSL 305
Query: 292 HRPTLNDVFLHLTGREIRDEEGGES 316
+P+L++VFL LTG + G+S
Sbjct: 306 GQPSLDEVFLALTGHDTGQSTDGDS 330
>gb|AAC44357.1| (U43537) ATP-binding protein involved in mithramycin resistance
[Streptomyces argillaceus]
Length = 320
Score = 224 bits (565), Expect = 1e-57
Identities = 122/318 (38%), Positives = 185/318 (57%), Gaps = 7/318 (2%)
Query: 4 IEVENLVK----KYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGK 59
I+ + L K K G AV G+ F V GEI FLGPNGAGKTTT+ +LTTLL P+SG
Sbjct: 2 IQAKGLAKTFTTKQGPVEAVAGVDFTVHTGEIVGFLGPNGAGKTTTMRMLTTLLPPSSGT 61
Query: 60 AIVAGHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELL 119
A++AG D++ EP +VR IG V Q ++ + G +YG+ E + + +E++
Sbjct: 62 AVIAGRDLLHEPAKVRTHIGYVSQAGGAKPSSPVRRDLVLQGRLYGMSRSEAEARADEVI 121
Query: 120 KFVELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRT 179
+ L DR ++ SG RR+++A L+H+PE+LFLDEPT LDP++R +WE+IR
Sbjct: 122 TQLGLEELADRIIQTLSGCQARRVDMALGLMHQPELLFLDEPTANLDPESRNDVWEHIRR 181
Query: 180 MKEEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVGNDIIYLKLESPK 239
+++E T+FLTTHY+DEA+ L DR+ IID G+IIAE + LK + +D I +++
Sbjct: 182 LRDERGTTVFLTTHYLDEADSLCDRVLIIDKGRIIAEDSPRSLKAAISHDTIEIEVADDT 241
Query: 240 EELKCLKADFIRGCKLLPDGRV-RIDVENATEALPKLFELAQKNNVKILEVTYHRPTLND 298
L A ++ +G V I +A L L + +++ + +PTL+D
Sbjct: 242 ARATELLAAHRDVHEVSVNGTVLSISCRDAERLLADLLRTLESARIRVESLRVLKPTLDD 301
Query: 299 VFLHLTGREIRDEEGGES 316
VF+ LT R R + G ++
Sbjct: 302 VFMTLTDR--RSQRGADA 317
>pir||S32908 hypothetical protein 4 - Streptomyces antibioticus
>gi|153382|gb|AAA26793.1| (L06249) ATP-binding protein
[Streptomyces antibioticus]
Length = 325
Score = 222 bits (559), Expect = 6e-57
Identities = 119/318 (37%), Positives = 188/318 (58%), Gaps = 11/318 (3%)
Query: 6 VENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAIVAGH 65
V LVK YG+ A+ G+ V++G + LGPNGAGKTT V +L+TL+ P SG+A VAG+
Sbjct: 3 VRGLVKHYGETKALDGVDLDVREGTVMGVLGPNGAGKTTLVRILSTLITPDSGQATVAGY 62
Query: 66 DVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKFVELW 125
DVV++P+++R+ IG+ Q S+D +L +EN+Y+ G + L +E + + +ELL+ L
Sbjct: 63 DVVRQPRQLRRVIGLTGQYASVDEKLPGWENLYLIGRLLDLSRKEARARADELLERFSLT 122
Query: 126 RFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMKEEHE 185
RP +SGGM+RRL++A ++I P +L+LDEPT GLDP+TR +W+ ++ M +
Sbjct: 123 EAARRPAGTYSGGMRRRLDLAASMIGRPAVLYLDEPTTGLDPRTRNEVWDEVKAMVGD-G 181
Query: 186 MTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVGNDIIYLKLESPKEELKCL 245
+T+ LTT YM+EAEQLA + ++D G++IA+G EELK VG + ++ P +L+ L
Sbjct: 182 VTVLLTTQYMEEAEQLASELTVVDRGRVIAKGGIEELKARVGGRTLRVRPVDPL-QLRPL 240
Query: 246 KADFIRGCKLLPDGRVRIDVENATEALPKLFE--------LAQKNNVKILEVTYHRPTLN 297
A + + +D E +P L + + + +T P+L+
Sbjct: 241 -AGMLDELGITGLASTTVDTETGALLVPILSDEQLTAVVGAVTARGITLSSITTELPSLD 299
Query: 298 DVFLHLTGREIRDEEGGE 315
+VFL LTG + E
Sbjct: 300 EVFLSLTGHRASAPQDAE 317
>pir||S76278 ABC-type transport protein sll0759 - Synechocystis sp. (strain PCC
6803) >gi|1001505|dbj|BAA10130.1| (D64000) ABC
transporter [Synechocystis sp.]
Length = 347
Score = 221 bits (558), Expect = 7e-57
Identities = 114/319 (35%), Positives = 195/319 (60%), Gaps = 10/319 (3%)
Query: 3 AIEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAIV 62
A++V+ L KKYG AVK ISF V +GEIF LGPNGAGKTTT+ L TL KP G+ +
Sbjct: 10 AVQVKQLRKKYGAIPAVKDISFAVPRGEIFGLLGPNGAGKTTTIRCLCTLAKPDGGELWI 69
Query: 63 AGHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKFV 122
G +V+ +P++ R+++G V Q+ ++D+ LT E + + +Y L +++I++LL +
Sbjct: 70 DGVNVLSDPRQARRRLGYVAQEVAIDKILTGRELLQLQASLYHLDAISSQKRIDQLLDIL 129
Query: 123 ELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMKE 182
L + D+ +SGG+++RL++A L+H+P +L LDEP++GLD ++R +WE++R +++
Sbjct: 130 GLTAYADQKTGTYSGGLKKRLDLAAGLLHQPTVLVLDEPSVGLDIESRFILWEFLRQLRD 189
Query: 183 EHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVGNDIIYLKLESPKEEL 242
T+ +T+HY++E + LADR+AIID G +IA GT ELK VG D + L+++ +
Sbjct: 190 A-GTTVVITSHYLEEIDALADRLAIIDQGTVIATGTPTELKDRVGGDRVTLRIKEFTADQ 248
Query: 243 KCLKA-DFIRGCKLLPD--------GRVRIDVENATEALPKLFELAQKNNVKILEVTYHR 293
+ KA +R + + + + V + L ++ + + + I + R
Sbjct: 249 EAEKASQILRSLAFVQEVIVNQAQGNSLNLVVTPQSNPLSQIEKALLADGLPIFSLAQSR 308
Query: 294 PTLNDVFLHLTGREIRDEE 312
P+L+DV+L TG+ + D +
Sbjct: 309 PSLDDVYLAATGKTLMDAD 327
>emb|CAA75761.1| (Y15759) ORF1 [Streptomyces rochei]
Length = 363
Score = 217 bits (547), Expect = 1e-55
Identities = 123/321 (38%), Positives = 189/321 (58%), Gaps = 23/321 (7%)
Query: 3 AIEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAIV 62
AIE LVK +G+ AV G+ +V G ++ LGPNGAGKTTTV VL TLL+P G+A V
Sbjct: 6 AIETTGLVKVFGENRAVDGVDLRVPAGTVYGLLGPNGAGKTTTVKVLATLLRPDGGEARV 65
Query: 63 AGHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKFV 122
G DV+ + VR ++ + Q S+D +LT EN+ + + G +E+ +LL
Sbjct: 66 FGRDVLADADAVRGRVSLTGQYASVDEDLTGTENLLLLARLLGHSKPAARERAAQLLDAF 125
Query: 123 ELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMKE 182
L R VK +SGGM+RR++IA ++++ P++LFLDEPT GLDP++R +W+ +R +
Sbjct: 126 GLSEAAGRQVKSYSGGMRRRIDIAASILNTPDLLFLDEPTTGLDPRSRNQVWDIVRAVVA 185
Query: 183 EHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVGNDIIYLKLESPKEEL 242
+ T+ LTT Y+DEA+QLA RIA+IDHG++IAEGT ELK VG+ ++L+L ++
Sbjct: 186 Q-GTTVLLTTQYLDEADQLASRIAVIDHGRVIAEGTKGELKASVGSGAVHLRLREAEQ-- 242
Query: 243 KCLKADFIRGCKLLPDGRVRIDVE----------------NATEALPKLFELAQKNNVKI 286
+ + R L + V++D + A +A L ELA + + +
Sbjct: 243 ---RPEAERILALALNATVQLDADPVALTARVNGHGTELGAAEQAARALSELA-RAGITV 298
Query: 287 LEVTYHRPTLNDVFLHLTGRE 307
+P+L++VFL LT ++
Sbjct: 299 DNFALGQPSLDEVFLALTDKK 319
>pir||B69065 ABC transporter (ATP-binding, daunorubicin resistance) -
Methanobacterium thermoautotrophicum (strain Delta H)
>gi|2622603|gb|AAB85962.1| (AE000909) ABC transporter
(ATP-binding [Methanobacterium thermoautotrophicum]
Length = 350
Score = 216 bits (545), Expect = 2e-55
Identities = 128/349 (36%), Positives = 194/349 (54%), Gaps = 45/349 (12%)
Query: 2 YAIEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAI 61
YAIE +L K YGDF AV ++ K++K IF FLGPNGAGKTTT+ +LT L+ P+SG A
Sbjct: 3 YAIETFDLTKVYGDFKAVDSLNMKIEKNSIFGFLGPNGAGKTTTIKMLTCLIPPSSGTAR 62
Query: 62 VAGHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKF 121
VAG+D++K P EVR++IG+V Q SL +LTA EN+ + YG+ + +IEEL++
Sbjct: 63 VAGYDILKNPDEVRQQIGMVPQKVSLYEDLTARENVEMCADFYGMPEDLKESRIEELMEL 122
Query: 122 VELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMK 181
V++ D+PV SGG Q+++ + +LIH+P+ILFLDEPTIGLDP T+ +W+ I +
Sbjct: 123 VDIKYAADKPVGQMSGGQQQKVSLVASLIHQPDILFLDEPTIGLDPTTKRVLWDLIDELN 182
Query: 182 EEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELK------------KLVGND 229
TI L +H M E E L D + II+ G + A T + LK K +G
Sbjct: 183 SSGH-TIILCSHDMYEVELLCDYVGIINQGVLAAFDTPQGLKDTVIKEEESLRAKEIGGI 241
Query: 230 IIYLKLESPKEELKCLKA----------------------DFIRGCKLLP---------D 258
+ + E+P+ E + ++ D + + LP
Sbjct: 242 LDRIDKETPESERRAIQEIKKSERICAGKEISMLIVNLTDDLLSELEALPVTLDVKKHHT 301
Query: 259 GRVRIDVENATE-ALPKLFELAQKNNVKILEVTYHRPTLNDVFLHLTGR 306
GR+ ++++ E A+ + +NN +I ++ P+L DVF+ +TGR
Sbjct: 302 GRIILELDETCETAVNDVLAAVIRNNARITSISTKDPSLEDVFMKVTGR 350
>pir||D72484 probable ATP-binding protein APE2516 - Aeropyrum pernix (strain
K1) >gi|5106221|dbj|BAA81532.1| (AP000064) 323aa long
hypothetical ATP-binding protein [Aeropyrum pernix]
Length = 323
Score = 216 bits (544), Expect = 3e-55
Identities = 132/328 (40%), Positives = 185/328 (56%), Gaps = 31/328 (9%)
Query: 2 YAIEVENLVKKYG---------DFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTL 52
YA+E E LVK+Y A+ G+ KV +G +F+ LGPNGAGKTT V +L+TL
Sbjct: 3 YAVEAEALVKEYRMGLLPWRARTIRALDGVDLKVGRGTLFSLLGPNGAGKTTLVKILSTL 62
Query: 53 LKPTSGKAIVAGHDVVKEPQEVRKKIGIVFQ-DPSLDRELTAYENMYIHGMIYGLKGREL 111
L P SG A VAG DVV+E VR +IG+V + +L L+ ++N++ +YG+ RE
Sbjct: 63 LLPDSGWARVAGFDVVREANNVRSRIGVVLGGERALYWRLSGWDNLWFFSQLYGIPPREA 122
Query: 112 KEKIEELLKFVELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRA 171
K +++ELL+ V L + V+ +S GM++RL IAR LI++PE+L LDEPTIGLDP+
Sbjct: 123 KRRVKELLEIVGLEEWAHVRVENYSKGMKQRLHIARGLINDPEVLLLDEPTIGLDPKAAR 182
Query: 172 HIWEYIRTMKEEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVGNDII 231
+ IR + E T+ LTTHYM EAE+L+DR+AII G+I+AEG E+LK LVG + +
Sbjct: 183 EVRSIIRRIVREGR-TVLLTTHYMVEAEELSDRVAIISKGRIVAEGPPEDLKSLVGGESV 241
Query: 232 YLKLESPKEELKCLKADFIRGCKLLPDGRV------------RIDVENATEALPKLFELA 279
ELK + D + GRV R+ V + L
Sbjct: 242 I--------ELKVMGGDRVSMLLERLGGRVISVVERDGARVFRVLVSEPDSFIEALLAEL 293
Query: 280 QKNNVKILEVTYHRPTLNDVFLHLTGRE 307
+ N I + P+L DVF+ L G E
Sbjct: 294 TRINASIRGLDVRSPSLEDVFIKLAGGE 321
>pir||T36741 probable ABC-type transport system ATP-binding protein -
Streptomyces coelicolor >gi|5531429|emb|CAB50934.1|
(AL096849) putative ABC-transporter ATP-binding protein
[Streptomyces coelicolor A3(2)]
Length = 332
Score = 214 bits (540), Expect = 1e-54
Identities = 120/307 (39%), Positives = 180/307 (58%), Gaps = 6/307 (1%)
Query: 2 YAIEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAI 61
YA+ E L K++G A++G+ V +G + LGPNGAGKTT V +LTTLL+P +G A
Sbjct: 5 YAVLSEGLEKRFGTVRALRGLDLAVPEGTVCGLLGPNGAGKTTAVRLLTTLLRPDAGSAR 64
Query: 62 VAGHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKF 121
VAGHD+V+E VR+ IG+ Q S+D +LT +N+ + ++ + R+ + +ELL
Sbjct: 65 VAGHDLVREAAAVRRLIGVTGQYASVDGDLTGRQNLRLFARLH--RVRDAAARADELLDR 122
Query: 122 VELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMK 181
L DRP SGG++RRL++A +L+ PE+LFLDEPT GLDP R +WE +R +K
Sbjct: 123 FGLAEAADRPAVTLSGGLRRRLDLAASLVRRPEVLFLDEPTTGLDPAGRNRVWETVRALK 182
Query: 182 EEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVGNDIIYLKLESPKEE 241
+ T+ LTT Y++EA++LAD IA++D G++ G+ ELK LVG + ++
Sbjct: 183 AD-GTTVLLTTQYLEEADRLADDIALVDRGRVAHTGSPAELKALVGTYAQAVVADADALV 241
Query: 242 LKCLKADFIRGCKLLPDGR---VRIDVENATEALPKLFELAQKNNVKILEVTYHRPTLND 298
D + G + + D V + + T LP+L V + + + PTL+D
Sbjct: 242 RAAGVLDRLTGAEPVLDHERRTVGVVSTDPTLTLPRLVRELDAAGVPLADASLRPPTLDD 301
Query: 299 VFLHLTG 305
VFL LTG
Sbjct: 302 VFLRLTG 308
>pir||S73019 daunorubicin resistance protein drrA - Mycobacterium leprae
>gi|467205|gb|AAA17362.1| (U00023) drrA; L518_F2_43
[Mycobacterium leprae]
Length = 331
Score = 213 bits (538), Expect = 2e-54
Identities = 121/314 (38%), Positives = 185/314 (58%), Gaps = 17/314 (5%)
Query: 3 AIEVENLVKKYGD--FTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKA 60
A+ V + K YG A+ +SF V +GE+ LGPNGAGKTT V +L+TL +P G A
Sbjct: 7 AVMVRGVRKTYGKGKIIALDDVSFDVDRGEVIGLLGPNGAGKTTMVDILSTLTRPDRGLA 66
Query: 61 IVAGHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLK 120
VAG+DVV EP VR+ I + Q ++D +L+ +N+ + G +YGL + + +ELL+
Sbjct: 67 TVAGYDVVSEPAGVRRSIMVTGQQVAVDDQLSGEQNLILFGRLYGLSKSVARVRTQELLE 126
Query: 121 FVELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTM 180
+L R V +SGGM+RR++IA L+ +P++ FLDEPT GLDP++R IW+ + +
Sbjct: 127 QFDLLHAGKRRVGTYSGGMRRRIDIACGLVVQPQVAFLDEPTTGLDPRSRQAIWDLVASF 186
Query: 181 KEEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVGNDIIYLKLESPKE 240
K+ T+ LTT Y++EA++L+DRI +IDHG +IAEGT+ ELK VG E
Sbjct: 187 KQIGIATL-LTTQYLEEADELSDRIILIDHGTVIAEGTASELKHRVGETF----CEIVPR 241
Query: 241 ELKCLKADFIRGCKLLPD----------GRVRIDVENATEALPKLFELAQKNNVKILEVT 290
+LK L LLP+ R+ + + T+ L + + +V++ ++
Sbjct: 242 DLKDLGTVVAALGSLLPERSRAMLTPTSDRITMPAPDGTQTLIEAARRIDEVSVELADIA 301
Query: 291 YHRPTLNDVFLHLT 304
RP+L+DVFL +T
Sbjct: 302 LRRPSLDDVFLSMT 315
>emb|CAC08414.1| (AL392178) putative ABC transport system ATP-binding protein
[Streptomyces coelicolor]
Length = 324
Score = 213 bits (538), Expect = 2e-54
Identities = 121/309 (39%), Positives = 176/309 (56%), Gaps = 16/309 (5%)
Query: 3 AIEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAIV 62
AI L K YGD T + GI V +G +F+ LGPNGAGKTT V +L+TL+ P +G V
Sbjct: 5 AITANGLRKSYGDKTVLDGIDLAVPEGTVFSLLGPNGAGKTTAVKILSTLVTPDAGDIRV 64
Query: 63 AGHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKFV 122
GHD+ PQ VR IG+ Q ++D +T ENM + ++ L E + ELL+
Sbjct: 65 GGHDLASAPQAVRGAIGVTGQFSAVDGLITGEENMLLMADLHHLPRPEGRRVAAELLERF 124
Query: 123 ELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMKE 182
+L +P +SGGM+RRL+IA L+ +P I+FLDEPT GLDP++R +W+ IR +
Sbjct: 125 DLTEAAGKPASTYSGGMKRRLDIAMTLVGDPRIIFLDEPTTGLDPRSRHTMWQIIRALVT 184
Query: 183 EHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVGNDIIYLKLESPKEEL 242
+ +T+FLTT Y++EA++LADRIA++ G+I AEGT+EELK+LV + L+ P
Sbjct: 185 D-GVTVFLTTQYLEEADELADRIAVLHDGRIAAEGTAEELKRLVPGGHVRLRFTDPTAYR 243
Query: 243 KCLKADFIRGCKLLPDG-------RVRIDVENATEALPKLFELAQKNNVKILEVTYHRPT 295
A LP ++I + + L + + ++ E+T H P
Sbjct: 244 DATAA--------LPHSAGDDNTLTLQIPSDGSQRDLRTILDRLDDAGIEADELTVHTPD 295
Query: 296 LNDVFLHLT 304
L+DVF LT
Sbjct: 296 LDDVFFALT 304
>pir||H71008 probable ATP-binding transport protein - Pyrococcus horikoshii
>gi|3257789|dbj|BAA30472.1| (AP000006) 308aa long
hypothetical ATP-binding transport protein [Pyrococcus
horikoshii]
Length = 308
Score = 213 bits (536), Expect = 3e-54
Identities = 125/319 (39%), Positives = 194/319 (60%), Gaps = 15/319 (4%)
Query: 1 MYAIEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKA 60
MYAIEVE L K YG F A+ +SF V +G +F FLGPNGAGKTTT+ + ++ P SG
Sbjct: 1 MYAIEVEKLTKSYGKFKAIDNLSFVVDEGIVFGFLGPNGAGKTTTILSMLGIIIPDSGDV 60
Query: 61 IVAGHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLK 120
+ G+D+ KEP + ++++G + ++ ++ ELTA+ N+ Y + +E +++IEELLK
Sbjct: 61 RILGYDIFKEPLKAKERLGFLPENATIYEELTAWRNLDFFASFYRMSKQEKEKRIEELLK 120
Query: 121 FVELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTM 180
V LW + R K FS GM++RL +A+ALI++PE+L LDEPT GLDP+ + + IR
Sbjct: 121 LVGLWDVRYRKAKTFSKGMRQRLLLAQALINDPELLILDEPTSGLDPEGARLVKDIIREQ 180
Query: 181 KEEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKK----LVGNDIIYLKLE 236
+++ + T+F ++H + E E+LAD++ II GK+ GT EE+KK L G + I ++ +
Sbjct: 181 RKQGK-TVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYE-IKIETK 238
Query: 237 SPKEELKCLKADFIRGCKLLPDGRVRIDVENATEALPKLFELAQKNNVKILEVTYHRPTL 296
P EL+ D IR K + + + E++ + ELA+K + I+ + P+L
Sbjct: 239 QPLPELEI--PDIIRIEKTTENKAIIFAKSDIRESISE--ELAKK-GITIISLEIEEPSL 293
Query: 297 NDVFLHLTGREIRDEEGGE 315
DVFL + I EG E
Sbjct: 294 EDVFL----KTIYRREGNE 308
>pir||E75122 hypothetical protein PAB1845 - Pyrococcus abyssi (strain Orsay)
>gi|5458205|emb|CAB49694.1| (AJ248285) hypothetical
protein [Pyrococcus abyssi]
Length = 305
Score = 212 bits (535), Expect = 4e-54
Identities = 124/306 (40%), Positives = 187/306 (60%), Gaps = 13/306 (4%)
Query: 1 MYAIEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKA 60
M IE+ENL K YG F AV +S +V+KG IF FLGPNGAGKTTT+ + ++ P SG
Sbjct: 1 MKVIEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSV 60
Query: 61 IVAGHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLK 120
+ G+D+ KEP + ++++G + ++ ++ ELTA+ N+ Y + +E +++IEELLK
Sbjct: 61 RLLGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLK 120
Query: 121 FVELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTM 180
V LW + R VK FS GM++RL +A+ALI++PE+L LDEPT GLDPQ + + I
Sbjct: 121 LVGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQGARLVKDIILEQ 180
Query: 181 KEEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKK----LVGNDI-IYLKL 235
K++ + T+F ++H + E E+LAD++ II GK+ GT EE+KK L G +I + K
Sbjct: 181 KKQGK-TVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYMELEGYEIKVETKQ 239
Query: 236 ESPKEELKCLKADFIRGCKLLPDGRVRIDVENATEALPKLFELAQKNNVKILEVTYHRPT 295
P+ EL D IR + + D +V I ++ + L E K + +L + P+
Sbjct: 240 PFPEIEL----PDVIR-IEKIADNKVLIFAKSDIREI--LSEELSKRGITVLSLEIEEPS 292
Query: 296 LNDVFL 301
L DVFL
Sbjct: 293 LEDVFL 298
>pir||G71131 probable ATP-binding protein - Pyrococcus horikoshii
>gi|3257230|dbj|BAA29913.1| (AP000003) 312aa long
hypothetical ATP-binding protein [Pyrococcus horikoshii]
Length = 312
Score = 212 bits (534), Expect = 5e-54
Identities = 122/304 (40%), Positives = 193/304 (63%), Gaps = 5/304 (1%)
Query: 4 IEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAIVA 63
IE NL K YG+F AV+G++F V +GE+F FLGPNGAGKTTT+ +LT +LKPTSG+ V
Sbjct: 8 IEAINLTKYYGNFPAVRGVTFSVNEGEVFGFLGPNGAGKTTTIRMLTGVLKPTSGQVRVL 67
Query: 64 GHDVVKEPQEV--RKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKF 121
G+D+ +EP+++ R+++GIV + + +LTA +N+ + G +YGL E++++ ELLK
Sbjct: 68 GYDMTREPEKLKARQRMGIVPEMANPYIDLTAMQNLKLMGELYGLPKWEIEKRSIELLKL 127
Query: 122 VELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMK 181
EL+ ++ V+ FS GM++RL +A A+I +PE+ FLDEPT GLD + I + IR K
Sbjct: 128 FELYEKRNIKVRGFSKGMRQRLVLAMAMIADPELYFLDEPTSGLDVISARIIKDIIRDEK 187
Query: 182 EEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVGNDIIYLKLESPKEE 241
+ + TIFLTTH M++A +L +RI II GK++A T E LK+L + P
Sbjct: 188 KAGK-TIFLTTHNMNDANELCERIGIIRKGKLVAIDTPEGLKRLTKEHLSVEVSLKPMMF 246
Query: 242 LKCLKADFIRGCKLLPDGRVRIDVENATEALPKLFELAQKNNVKILEVTYHRPTLNDVFL 301
+ + +R +L +V+I + + + ++ E A++ +KI+ + P+L DVF+
Sbjct: 247 DPSVLSSALRVERL--GDKVKIYTNDPDKTVKEIVEYAKERKLKIVSIRTLSPSLEDVFV 304
Query: 302 HLTG 305
+ G
Sbjct: 305 EIIG 308
>sp|P55476|NODI_RHISN NODULATION ATP-BINDING PROTEIN I >gi|2182424|gb|AAB91694.1|
(AE000076) NodI [Rhizobium sp. NGR234]
Length = 343
Score = 212 bits (533), Expect = 6e-54
Identities = 127/313 (40%), Positives = 180/313 (56%), Gaps = 18/313 (5%)
Query: 3 AIEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAIV 62
AIE+ N+ K YGD V +SF + GE F LGPNGAGK+T ++ L P G V
Sbjct: 44 AIELTNVSKSYGDKVVVDQLSFTITSGECFGLLGPNGAGKSTVSRLVLGLAPPDEGTITV 103
Query: 63 AGHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKFV 122
G V + R +IG+V Q +LDRE TA EN+ + G +GL REL+E I LL F
Sbjct: 104 LGEPVPARARLARSRIGVVPQFDTLDREFTARENLLVFGRYFGLHTRELEEAIPPLLDFA 163
Query: 123 ELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMKE 182
L D PV SGGMQRRL +A ALI++P++L LDEPT GLDP R IWE +R++
Sbjct: 164 RLESKADVPVAQLSGGMQRRLTLACALINDPQLLILDEPTTGLDPHARHLIWERLRSLLA 223
Query: 183 EHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEEL-KKLVGNDIIYLKLESPKEE 241
+ TI LTTH+M+EA++L DR+ +I+HG+ I EG L + +G D+I + +P+ E
Sbjct: 224 LGK-TILLTTHFMEEADRLCDRLCVIEHGRKIVEGRPHALIDEQIGCDVIEIYGGNPR-E 281
Query: 242 LKCLKADFIRGCKLLPDGRVRIDVEN----ATEALPKLFELAQKNNVKILEVTYHRPTLN 297
L + + + RV + E +++ +L + +++L+ P L
Sbjct: 282 LTSVVGPYAQ--------RVEVSGETLFCYSSDPEQVRLQLRGRTGLRLLQ---RPPNLE 330
Query: 298 DVFLHLTGREIRD 310
DVFL LTGRE++D
Sbjct: 331 DVFLRLTGREMKD 343
>emb|CAB94554.1| (AL359152) putative ABC transporter, ATP-binding subunit
[Streptomyces coelicolor A3(2)]
Length = 260
Score = 211 bits (531), Expect = 1e-53
Identities = 102/210 (48%), Positives = 137/210 (64%)
Query: 14 GDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAIVAGHDVVKEPQE 73
G AV+GI V++GEI FLGPNGAGKTTT+ +LTTLL PT G A VAGHD+ +P
Sbjct: 18 GPVEAVRGIDLTVREGEILGFLGPNGAGKTTTLRMLTTLLAPTGGAATVAGHDLATDPAG 77
Query: 74 VRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKFVELWRFKDRPVK 133
VR G V Q +D ++T E + G +Y L E+ EL + + L DR
Sbjct: 78 VRAACGYVAQSGGVDPQITVREELVTQGRLYRLSRARAAERAGELARDLGLTGLLDRRCG 137
Query: 134 YFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMKEEHEMTIFLTTH 193
SGG +RRL+IA AL H P++LFLDEPT GLDP +RA +W+ +R +++ H T+FLTTH
Sbjct: 138 ALSGGQRRRLDIAMALTHRPKVLFLDEPTTGLDPGSRADLWDLVRRLRDAHGTTVFLTTH 197
Query: 194 YMDEAEQLADRIAIIDHGKIIAEGTSEELK 223
Y+DEA+ L+DR+ ++D G ++AEGT LK
Sbjct: 198 YLDEADALSDRLVVVDGGTVVAEGTPAALK 227
>pir||C72568 probable ATP-binding transport protein APE1829 - Aeropyrum pernix
(strain K1) >gi|5105519|dbj|BAA80832.1| (AP000062) 345aa
long hypothetical ATP-binding transport protein
[Aeropyrum pernix]
Length = 345
Score = 210 bits (530), Expect = 1e-53
Identities = 137/324 (42%), Positives = 191/324 (58%), Gaps = 30/324 (9%)
Query: 4 IEVENLVKKYGD-------FTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPT 56
IE LVK++ A+KG+SF V +GEI++FLGPNGAGKTTTV +L+TLL P
Sbjct: 6 IEARGLVKRFVSGRIRRRVVEALKGVSFSVYEGEIYSFLGPNGAGKTTTVRILSTLLDPD 65
Query: 57 SGKAIVAGHDVVKEPQEVRKKIGIVFQDPSLDR----ELTAYENMYIHGMIYGLKGRELK 112
G+A VAG DVVKE EVRK+IG++ S++R +LT EN+Y G IYG+ ELK
Sbjct: 66 GGEARVAGFDVVKERWEVRKRIGVML---SVERGFYWKLTGRENLYYFGRIYGIPQGELK 122
Query: 113 EKIEELLKFVELWRF--KDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTR 170
+I+E+L V L D+P + S GM+ RL +AR L+ +PE+L LDEPT+GLDP +
Sbjct: 123 SRIKEVLDLVGLTDLGGADKPFEEMSLGMKARLGLARVLLKDPEVLILDEPTLGLDPASA 182
Query: 171 AHIWEYIRTMKEEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVGNDI 230
I IR++ E TIF+TTH M EAE ++DR+ II G+I EGT +ELK+ V + I
Sbjct: 183 RTIRGVIRSLASEGR-TIFITTHNMVEAEMISDRVGIIIGGRIAMEGTPDELKRRVFSSI 241
Query: 231 -----IYLKLESPKEELKCLKADF---IRGCKLLPDGRVRIDV-----ENATEALPKLFE 277
+ + K+ +K ++ I G DG + V E A + ++
Sbjct: 242 NLEFRVKASGHAAKKFFYDVKGEYGNRIVGGVTFSDGILTFRVSVNRDEPAEPIIDRITR 301
Query: 278 LAQKNNVKILEVTYHRPTLNDVFL 301
LA + KILE+ P+L DVF+
Sbjct: 302 LAYQYRFKILEIKALEPSLEDVFV 325
>pir||D70984 probable drrA protein - Mycobacterium tuberculosis (strain H37RV)
>gi|1781083|emb|CAB06095.1| (Z83857) drrA [Mycobacterium
tuberculosis]
Length = 331
Score = 209 bits (526), Expect = 4e-53
Identities = 119/314 (37%), Positives = 183/314 (57%), Gaps = 17/314 (5%)
Query: 3 AIEVENLVKKYGD--FTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKA 60
A+ V + K YG A+ +SFKV++GE+ LGPNGAGKTT V +L+TL +P +G A
Sbjct: 7 AVVVNGVRKTYGKGKIVALDDVSFKVRRGEVIGLLGPNGAGKTTMVDILSTLTRPDAGSA 66
Query: 61 IVAGHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLK 120
I+AG+DVV EP VR+ I + Q ++D L+ +N+ + G ++GL +++ ELL+
Sbjct: 67 IIAGYDVVSEPAGVRRSIMVTGQQVAVDDALSGEQNLVLFGRLWGLSKSAARKRAAELLE 126
Query: 121 FVELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTM 180
L R V +SGGM+RR++IA L+ +P++ FLDEPT GLDP++R IW+ + +
Sbjct: 127 QFSLVHAGKRRVGTYSGGMRRRIDIACGLVVQPQVAFLDEPTTGLDPRSRQAIWDLVASF 186
Query: 181 KEEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVGNDIIYLKLESPKE 240
K+ T+ LTT Y++EA+ L+DRI +IDHG IIAEGT+ ELK G+ E
Sbjct: 187 KKLGIATL-LTTQYLEEADALSDRIILIDHGIIIAEGTANELKHRAGDTF----CEIVPR 241
Query: 241 ELKCLKADFIRGCKLLPD----------GRVRIDVENATEALPKLFELAQKNNVKILEVT 290
+LK L A LLP+ R+ + + L + + +++ ++
Sbjct: 242 DLKDLDAIVAALGSLLPEHHRAMLTPDSDRITMPAPDGIRMLVEAARRIDEARIELADIA 301
Query: 291 YHRPTLNDVFLHLT 304
RP+L+ VFL +T
Sbjct: 302 LRRPSLDHVFLAMT 315
>sp|P72335|NODI_RHIS3 NODULATION ATP-BINDING PROTEIN I >gi|1531621|gb|AAB16898.1|
(U53327) NodI [Rhizobium sp. N33]
Length = 304
Score = 205 bits (517), Expect = 5e-52
Identities = 124/313 (39%), Positives = 184/313 (58%), Gaps = 22/313 (7%)
Query: 3 AIEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAIV 62
AI++ + K +GD V G+SF V GE F LGPNGAGK+T +L + P +GK V
Sbjct: 5 AIDLAGVKKSFGDKLVVNGLSFTVASGECFGLLGPNGAGKSTIARMLLGMTVPDAGKITV 64
Query: 63 AGHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKFV 122
G V + RK IG+V Q +LD+E T EN+ + G +G+ R++KE I LL+F
Sbjct: 65 LGEPVGARSRLARKSIGVVPQFDNLDQEFTVRENLLVFGRYFGMSTRKIKEVIPSLLEFA 124
Query: 123 ELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMKE 182
L D V SGGM+RRL +ARALI++P++L +DEPT GLDP R IWE +R +
Sbjct: 125 RLESKADARVGELSGGMKRRLTLARALINDPQLLVMDEPTTGLDPHARHLIWERLRFLLA 184
Query: 183 EHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEEL-KKLVGNDIIYLKLESPKEE 241
+ TI LTTH+M+EAE+L DR+ +++HG+ +AEG+ L ++ +G +I + +P +E
Sbjct: 185 RGK-TIILTTHFMEEAERLCDRLCVLEHGRKLAEGSPHALIEEHIGCQVIEIFGGNP-QE 242
Query: 242 LKCLKADFIRGCKLLPDGRVRIDVENAT----EALPK--LFELAQKNNVKILEVTYHRPT 295
L L +++ R++V T A P+ +L + +++LE P+
Sbjct: 243 LVSLIRPYVQ----------RVEVSGETLFCYTADPEQVRVQLRGRAGLRLLE---RPPS 289
Query: 296 LNDVFLHLTGREI 308
L DVFL LTGRE+
Sbjct: 290 LEDVFLRLTGREM 302
>pir||E72384 ABC transporter, ATP-binding protein - Thermotoga maritima (strain
MSB8) >gi|4980892|gb|AAD35474.1|AE001718_11 (AE001718)
ABC transporter, ATP-binding protein [Thermotoga
maritima]
Length = 301
Score = 203 bits (511), Expect = 2e-51
Identities = 124/307 (40%), Positives = 174/307 (56%), Gaps = 20/307 (6%)
Query: 4 IEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAIVA 63
++V +L K YGD AV GISF V++G +F+FLGPNGAGKTTTV +L L K SG+
Sbjct: 15 LKVVDLKKHYGDVKAVDGISFTVERGTVFSFLGPNGAGKTTTVEILEGLRKKDSGEIYYF 74
Query: 64 GHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKFVE 123
G +E ++KIG+ Q + LT +E + + +YG G +LK E++
Sbjct: 75 GERKDVLDRETKRKIGVCLQKSAFFENLTVWETLKLFRGLYG-TGLDLK----EVMGLFS 129
Query: 124 LWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMKEE 183
L + + VK SGG +RL +A A I++PEI+FLDEPT GLDPQ R IW+ I K
Sbjct: 130 LENIEKKMVKTLSGGQLQRLAVAVAFINDPEIVFLDEPTTGLDPQARRQIWDTIEHFKNL 189
Query: 184 HEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVGNDIIYLKLESPKEELK 243
+ TIFLTTHYM+EAE+L+D + IIDHGKIIAEGT L G + E
Sbjct: 190 GK-TIFLTTHYMEEAERLSDHVCIIDHGKIIAEGTPSSLISSSGLKTVV--------EFD 240
Query: 244 CLKADFIRGCKLLPDGRVRIDVENATEALPKLFELAQKNNVKILEVTYHRPTLNDVFLHL 303
C + +R + + V ++ + E + L + N + + +P L DVFL L
Sbjct: 241 CDQDVNVRYLEKKENHYV-VETDAPEELIKDLLK-----NWNVSNIVIRKPNLEDVFLKL 294
Query: 304 TGREIRD 310
TGR++R+
Sbjct: 295 TGRDLRE 301
>emb|CAC11370.1| (AL445063) gliding motility protein related [Thermoplasma
acidophilum]
Length = 305
Score = 199 bits (501), Expect = 4e-50
Identities = 114/299 (38%), Positives = 178/299 (59%), Gaps = 4/299 (1%)
Query: 4 IEVENLVKKYGDFT-AVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAIV 62
IEVE+L + Y T V +SF V KGEI+ LG NGAGKTTT+ +TT+L GK +
Sbjct: 6 IEVEHLRQTYDGRTFVVDDVSFYVLKGEIYGLLGKNGAGKTTTIRTMTTILPVHYGKVRI 65
Query: 63 AGHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKFV 122
G DV + +++R++IG+V Q+ S D + N+ ++GM++ + LK +IEE+L+
Sbjct: 66 LGMDVSENAEKIRRRIGVVLQNESFDFA-SVERNLKVYGMLWDVPREVLKARIEEVLEVF 124
Query: 123 ELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMKE 182
+L + + SGG ++RL++AR +H+ ++LFLDEPT+GLDP R + YIR K
Sbjct: 125 DLGQLRKVRAMELSGGQKKRLQVAREFLHDMDLLFLDEPTVGLDPIMRRSVLNYIRD-KA 183
Query: 183 EHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVGNDIIYLKLESPKEEL 242
+T+ TT M+EA+ L DRIAI++ GKI+AEGTS +LK G+ + S + +
Sbjct: 184 RKGLTVLYTTQIMEEADYLCDRIAIMNRGKIVAEGTSSDLKSKYGDLKTIHVVVSGEIDY 243
Query: 243 KCLKADFIRGCKLLPDGRVRIDVENATEALPKLFELAQKNNVKILEVTYHRPTLNDVFL 301
+ L+A F L + +RI +N + LP L + ++I ++ +L+DVFL
Sbjct: 244 EDLRAKFPEDV-LFDNEEIRIVSKNVEDILPDLIIYLKTKGIRIERISVEESSLDDVFL 301
>gi|11498611 ABC transporter, ATP-binding protein [Archaeoglobus fulgidus]
>gi|7445743|pir||F69375 ABC transporter, ATP-binding
protein homolog - Archaeoglobus fulgidus
>gi|2649585|gb|AAB90232.1| (AE001034) ABC transporter,
ATP-binding protein [Archaeoglobus fulgidus]
Length = 285
Score = 197 bits (496), Expect = 1e-49
Identities = 113/309 (36%), Positives = 178/309 (57%), Gaps = 34/309 (11%)
Query: 1 MYAIEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKA 60
M +E+ NL ++GDF AVKG++ V++GEI LGPNG+GKTTT+ + ++ P G
Sbjct: 1 MNILEISNLSVRFGDFYAVKGLTLNVRRGEILGLLGPNGSGKTTTIRAIFGMV-PYEG-- 57
Query: 61 IVAGHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLK 120
E + +G + Q+ L L+ EN+ +YG+ E + ++EE+LK
Sbjct: 58 ---------EIRNYATSVGWMPQNSPLYLNLSVEENLRFFASLYGI---EDERRVEEMLK 105
Query: 121 FVELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTM 180
V+L R++ R VK SGGM++R +A A++H+PE+L LDEPT G+DP R WE +
Sbjct: 106 LVQLERYRKRLVKNLSGGMRQRAMLACAMLHDPELLVLDEPTAGVDPPLRVSFWEQFEKL 165
Query: 181 KEEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVGNDIIYLKLESPKE 240
+EE + TI +TTHYMDEAE+ +R+ +I +G IAEGT EE+K+ D + L+++
Sbjct: 166 REEGK-TILVTTHYMDEAER-CERLVLIRNGSKIAEGTPEEIKRRACGDRLLLEVD---- 219
Query: 241 ELKCLKADFIRGCKLLPD------GRVRIDVENATEALPKLFELAQKNNVKILEVTYHRP 294
D + ++L D G+V ++V++A PK+ E+ + VK+ V R
Sbjct: 220 -------DALAASRILSDYRSWINGKVVVEVDDAASEAPKIIEMLSRAGVKVFRVEIRRC 272
Query: 295 TLNDVFLHL 303
TL + F+ L
Sbjct: 273 TLEEAFMRL 281
>pir||S75436 hypothetical protein c05019 - Sulfolobus solfataricus
>gi|1707842|emb|CAA69520.1| (Y08257) putative ABC
transporter [Sulfolobus solfataricus]
Length = 246
Score = 196 bits (494), Expect = 2e-49
Identities = 107/241 (44%), Positives = 159/241 (65%), Gaps = 8/241 (3%)
Query: 4 IEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAIVA 63
+EV++L K+Y D ++GISF V KGEIF+ LGPNGAGKTTTV +L+ +LKPT G+ V
Sbjct: 6 VEVKDLYKEYKDKEVLRGISFTVYKGEIFSLLGPNGAGKTTTVKILSCVLKPTRGEVKVI 65
Query: 64 GHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKFVE 123
G+ V E ++R++IG++ QD +LT EN+ +Y K + +++EL+ ++
Sbjct: 66 GYKVPNECGKIRERIGVMPQDYQGFLDLTVRENIEYFVKLYNGK----ETQVDELISLLD 121
Query: 124 LWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMKEE 183
L + K++ ++Y SGG RR+ IA A EILFLDEPT+GLDP+ R WE I+ MK +
Sbjct: 122 LEKVKNQKLRYLSGGYVRRVGIASAFAGSQEILFLDEPTVGLDPKARRGFWEIIKMMKNK 181
Query: 184 HEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELK---KLVGNDIIYLKLESPKE 240
+TIFLTTHY+DEA++L+DR+AI+ GK+I T++E+ K + YL+L E
Sbjct: 182 -GVTIFLTTHYLDEAQKLSDRVAILYGGKLIKVSTADEIMAEFKATNLEDAYLELIKSLE 240
Query: 241 E 241
+
Sbjct: 241 D 241
>gb|AAK40417.1| ABC transporter, ATP binding protein [Sulfolobus solfataricus]
Length = 246
Score = 196 bits (494), Expect = 2e-49
Identities = 107/241 (44%), Positives = 159/241 (65%), Gaps = 8/241 (3%)
Query: 4 IEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAIVA 63
+EV++L K+Y D ++GISF V KGEIF+ LGPNGAGKTTTV +L+ +LKPT G+ V
Sbjct: 6 VEVKDLYKEYKDKEVLRGISFTVYKGEIFSLLGPNGAGKTTTVKILSCVLKPTRGEVKVI 65
Query: 64 GHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKFVE 123
G+ V E ++R++IG++ QD +LT EN+ +Y K + +++EL+ ++
Sbjct: 66 GYKVPNECGKIRERIGVMPQDYQGFLDLTVRENIEYFVKLYNGK----ETQVDELISLLD 121
Query: 124 LWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMKEE 183
L + K++ ++Y SGG RR+ IA A EILFLDEPT+GLDP+ R WE I+ MK +
Sbjct: 122 LEKVKNQKLRYLSGGYVRRVGIASAFAGSQEILFLDEPTVGLDPKARRGFWEIIKMMKNK 181
Query: 184 HEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELK---KLVGNDIIYLKLESPKE 240
+TIFLTTHY+DEA++L+DR+AI+ GK+I T++E+ K + YL+L E
Sbjct: 182 -GVTIFLTTHYLDEAQKLSDRVAILYGGKLIKVSTADEIMAEFKATNLEDAYLELIKSLE 240
Query: 241 E 241
+
Sbjct: 241 D 241
>pir||C69049 ABC transporter (ATP-binding protein) - Methanobacterium
thermoautotrophicum (strain Delta H)
>gi|2622479|gb|AAB85847.1| (AE000900) ABC transporter
(ATP-binding protein) [Methanobacterium
thermoautotrophicum]
Length = 319
Score = 192 bits (483), Expect = 5e-48
Identities = 115/303 (37%), Positives = 172/303 (55%), Gaps = 14/303 (4%)
Query: 4 IEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAIVA 63
IEVE++ K +G A+ +SF V +GE+ +G NGAGKTT + ++ +L P SG V
Sbjct: 19 IEVESVSKSFGRIRALDNLSFSVAEGELMGIIGHNGAGKTTAIRIIAGILHPDSGTVRVG 78
Query: 64 GHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKFVE 123
GHDV ++P V+ IG + ++P+L A + + G +YG+ L ++I ELL+ V
Sbjct: 79 GHDVTEDPLSVKSMIGYLPEEPNLYERFRAGDLLRYFGELYGVPRDVLDDRIAELLELVG 138
Query: 124 LWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMKEE 183
+ P+ FS G+++R+ IARALIH+P I+ DEPT+GLDP T I E+IR +K
Sbjct: 139 MTDRAMDPINTFSKGLRQRIGIARALIHDPPIIIFDEPTMGLDPATAFSIREFIRDLK-- 196
Query: 184 HEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVGNDIIYLKLESPKEELK 243
T+ L THYM+EAE L DR+AII+ G+I+ GT +ELK + D++ LE ++
Sbjct: 197 GSKTMILCTHYMEEAEYLCDRVAIINQGRILDIGTPDELKSKIRGDLV---LEVKVRDIS 253
Query: 244 CLKAD---FIRGCKLLP-DG-RVRIDVENATEALPKLFELAQKNNVKILEVTYHRPTLND 298
+ I G K + DG +R+ +EN + EL + V TLND
Sbjct: 254 SVGEGDLMMIPGVKSVEVDGSTLRVSLENRGAISGVIMEL----GANVSGVNTREATLND 309
Query: 299 VFL 301
VF+
Sbjct: 310 VFI 312
>pir||B83294 probable ATP-binding component of ABC transporter PA2812 [imported]
- Pseudomonas aeruginosa (strain PAO1)
>gi|9948896|gb|AAG06200.1|AE004708_6 (AE004708) probable
ATP-binding component of ABC transporter [Pseudomonas
aeruginosa]
Length = 310
Score = 192 bits (483), Expect = 5e-48
Identities = 105/307 (34%), Positives = 178/307 (57%), Gaps = 6/307 (1%)
Query: 3 AIEVENLVKKYGD-FTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAI 61
A+ + L K YG+ F A+KGI V +G+ FA LGPNGAGK+TT+ +L+TL+ TSG
Sbjct: 4 ALSIRQLTKTYGNGFQALKGIDLDVAEGDFFALLGPNGAGKSTTIGILSTLVNKTSGSVS 63
Query: 62 VAGHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKF 121
V GHD+ K+P +++ +G+V Q+ + ++ ++ + YG+ + KE+ E L
Sbjct: 64 VFGHDLDKDPAGLKRCLGVVPQEFNFNQFEKVFDIVVTQAGYYGIPAKIAKERAERYLTQ 123
Query: 122 VELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMK 181
+ LW ++ + SGGM+RRL IARAL+H+P +L LDEPT G+D + R +W ++ +
Sbjct: 124 LGLWDKRNEASRMLSGGMKRRLMIARALVHQPRLLILDEPTAGVDIELRRSMWSFLTELN 183
Query: 182 EEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVGNDIIYLKLESPKEE 241
+E ++I LTTHY++EAEQL IAIIDHG+I+ + +L + ++ L L++ +
Sbjct: 184 QE-GISIILTTHYLEEAEQLCRNIAIIDHGEIVQNTSMRDLLMTLHSETFLLDLKNVQAL 242
Query: 242 LKCLKADFIRGCKLLPDGRVRIDVENATEALPKLFELAQKNNVKILEVTYHRPTLNDVFL 301
L +L+ D + + VE ++ + LF +++L + L ++F+
Sbjct: 243 PPTLDG---YPTRLVDDHTLEVQVEK-SQGINDLFAQLGAQGIEVLSLRNKTNRLEELFV 298
Query: 302 HLTGREI 308
L + +
Sbjct: 299 SLVEKNL 305
>dbj|BAB07698.1| (AP001520) ABC transporter (ATP-binding protein) [Bacillus
halodurans]
Length = 257
Score = 191 bits (481), Expect = 8e-48
Identities = 103/223 (46%), Positives = 144/223 (64%), Gaps = 3/223 (1%)
Query: 3 AIEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAIV 62
AI V+ L K + + +KG+ F V++GEIFA LG NGAGKTTTV++L+TLLKP G+A +
Sbjct: 5 AISVKRLKKSFKNKDVLKGVDFAVQRGEIFALLGSNGAGKTTTVNILSTLLKPDEGEASI 64
Query: 63 AGHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKFV 122
G DV ++P VR+ I + Q +LD LT EN+ I + G+ + + LL
Sbjct: 65 CGFDVQRQPDHVRQSISLTGQFAALDGMLTGRENLMIIAKLRGVPNP--SQVADHLLARF 122
Query: 123 ELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMKE 182
L +R +SGGM+RRL+IA +LI +P ++FLDEPT GLDP+ R +W+ ++ +
Sbjct: 123 SLTDAANRRADQYSGGMKRRLDIAMSLIGKPAVIFLDEPTTGLDPEGRIEVWDAVKEL-A 181
Query: 183 EHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKL 225
TI LTT Y++EAEQLADRIAI+ GKII GT ELK++
Sbjct: 182 GGGTTILLTTQYLEEAEQLADRIAILHDGKIITTGTLAELKEM 224
>dbj|BAA95019.1| (AB033992) ATP-binding protein [Streptomyces kasugaensis]
Length = 329
Score = 191 bits (481), Expect = 8e-48
Identities = 119/293 (40%), Positives = 169/293 (57%), Gaps = 9/293 (3%)
Query: 18 AVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAIVAGHDVVKEPQEVRKK 77
A+ ++ V +GE LGPNGAGKTT V +L+T+L PTSG+A+VAGHDV E +VR++
Sbjct: 35 ALDSVNLSVPEGETHGVLGPNGAGKTTLVRILSTMLLPTSGRALVAGHDVTTEADQVRRR 94
Query: 78 IGIVF-QDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKFVELWRFKDRPVKYFS 136
IGIVF D L +TA +N+ +Y + +K + +ELL+ V L D PV+ FS
Sbjct: 95 IGIVFGGDNGLYTRITARQNLVFWATMYRVDASVVKRRSQELLERVGLADRADEPVEGFS 154
Query: 137 GGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMKEEHEMTIFLTTHYMD 196
GM++RL +AR LI +P +LFLDEPT+G+DP + + +K E TI +TTH M
Sbjct: 155 RGMRQRLHLARGLIGDPAVLFLDEPTMGMDPLATRDFRDLVHELKAEGR-TILITTHDMS 213
Query: 197 EAEQLADRIAIIDHGKI-IAEGTSEELKKLVGNDIIYLKLESPKEELKCLKA---DFIRG 252
EAE L DR++++DHG I + E T+ + L G+D I + L + L A R
Sbjct: 214 EAEALCDRVSLVDHGSILVTEPTATIGRMLSGHDRIDVTLREDQSPLLSELAGLPQVERV 273
Query: 253 CKLLPDGRVRIDVENATEALPKLFELAQKNNVKILEVTYHRPTLNDVFLHLTG 305
KL G VRI +A +A P + + L RPTL +V++HL G
Sbjct: 274 DKLSEPGSVRIHTVSA-DANPVVLRWLLDAGIDALRT--GRPTLEEVYVHLVG 323
>pir||B75076 daunorubicin resistance ATP-binding protein drra PAB1703 -
Pyrococcus abyssi (strain Orsay)
>gi|5458423|emb|CAB49911.1| (AJ248286) DAUNORUBICIN
RESISTANCE ATP-BINDING PROTEIN DRRA [Pyrococcus abyssi]
Length = 314
Score = 190 bits (478), Expect = 2e-47
Identities = 104/315 (33%), Positives = 177/315 (56%), Gaps = 10/315 (3%)
Query: 1 MYAIEVENLVKKY----GDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPT 56
M +EV+++ KK+ G+ AV +SF GE+ LGPNGAGKTTT+ ++ T+ +P
Sbjct: 1 MPILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPD 60
Query: 57 SGKAIVAGHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIE 116
SG+ +V G D VK P EVRK+I + Q+P L L+ + + + G R+ K+ E
Sbjct: 61 SGEVLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCE 120
Query: 117 ELLKFVELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEY 176
++L+ L + S G++RR+++A AL + ++FLDEPT G+DP+++ WE
Sbjct: 121 DILELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWEL 180
Query: 177 IRTMKEEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVGNDIIYLKLE 236
I+ E+ +T+ LT+H + E E LADR+ I++ GKI+AEG+ +ELKK G + + LE
Sbjct: 181 IKEKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFGK-TVRIVLE 239
Query: 237 SPKEELKCLKADFIR-----GCKLLPDGRVRIDVENATEALPKLFELAQKNNVKILEVTY 291
P + + LK + +R +L D + ++ +++ + ++ +KI ++
Sbjct: 240 EPIKNFELLKEELLRVKNVKDVRLARDDSFDVYFKSLDDSINGILQVISPQELKIKDIFT 299
Query: 292 HRPTLNDVFLHLTGR 306
DV+L + R
Sbjct: 300 ATANFEDVYLEIIER 314
>pir||B64816 ABC-type transport protein ybhF - Escherichia coli
>gi|1787012|gb|AAC73881.1| (AE000181) putative
ATP-binding component of a transport system [Escherichia
coli K12] >gi|4062352|dbj|BAA35454.1| (D90716) ATP
binding cassette transporter ABC2 [Escherichia coli]
Length = 583
Score = 189 bits (475), Expect = 4e-47
Identities = 100/226 (44%), Positives = 141/226 (62%), Gaps = 2/226 (0%)
Query: 4 IEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAIVA 63
IE + L KK+GDF A ++F VK+GEIF LGPNGAGK+TT ++ LL PTSG+A+V
Sbjct: 335 IEAKELTKKFGDFAATDHVNFAVKRGEIFGLLGPNGAGKSTTFKMMCGLLVPTSGQALVL 394
Query: 64 GHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKFVE 123
G D+ + + R+ +G + Q SL LT +N+ +YGL+GR EKI + +
Sbjct: 395 GMDLKESSGKARQHLGYMAQKFSLYGNLTVEQNLRFFSGVYGLRGRAQNEKISRMSEAFG 454
Query: 124 LWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMKEE 183
L G ++RL +A +L+HEP+ILFLDEPT G+DP TR W +I +M E+
Sbjct: 455 LKSIASHATDELPLGFKQRLALACSLMHEPDILFLDEPTSGVDPLTRREFWLHINSMVEK 514
Query: 184 HEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVGND 229
+T+ +TTH+MDEAE DRI ++ GK+IA GT ++LK ND
Sbjct: 515 -GVTVMVTTHFMDEAE-YCDRIGLVYRGKLIASGTPDDLKAQSAND 558
Score = 134 bits (333), Expect = 2e-30
Identities = 93/310 (30%), Positives = 157/310 (50%), Gaps = 18/310 (5%)
Query: 4 IEVENLVKKYG--DFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAI 61
I + L K++ D AV + + G + +GP+GAGKTT + +L LLKP SG A
Sbjct: 11 ITLNGLEKRFPGMDKPAVAPLDCTIHAGYVTGLVGPDGAGKTTLMRMLAGLLKPDSGSAT 70
Query: 62 VAGHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKF 121
V G D +K + +G + Q L +LT EN+ ++ + + G K+ LL+F
Sbjct: 71 VIGFDPIKNDGALHAVLGYMPQKFGLYEDLTVMENLNLYADLRSVTGEARKQTFARLLEF 130
Query: 122 VELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMK 181
L F R SGGM+++L +A L+ EP++L LDEP +G+DP +R +W+ + +
Sbjct: 131 TSLGPFTGRLAGKLSGGMKQKLGLACTLVGEPKVLLLDEPGVGVDPISRRELWQMVHELA 190
Query: 182 EEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEEL-KKLVGNDIIYLKLESPKE 240
E M I +T Y+DEAEQ D + +++ G+++ +G + L + + G + + SP E
Sbjct: 191 GE-GMLILWSTSYLDEAEQCRD-VLLMNEGELLYQGEPKALTQTMAGRSFL---MTSPHE 245
Query: 241 ELKCLKADFIRGCKL--LPDGRVR---IDVENATEALPKLFELAQKNNVKILEVTYHRPT 295
+ L R KL + DG ++ + + EA P ++ + + + + P
Sbjct: 246 GNRKL---LQRALKLPQVSDGMIQGKSVRLILKKEATPD--DIRHADGMPEININETTPR 300
Query: 296 LNDVFLHLTG 305
D F+ L G
Sbjct: 301 FEDAFIDLLG 310
>sp|P75776|YBHF_ECOLI HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PROTEIN YBHF
Length = 578
Score = 189 bits (475), Expect = 4e-47
Identities = 100/226 (44%), Positives = 141/226 (62%), Gaps = 2/226 (0%)
Query: 4 IEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAIVA 63
IE + L KK+GDF A ++F VK+GEIF LGPNGAGK+TT ++ LL PTSG+A+V
Sbjct: 330 IEAKELTKKFGDFAATDHVNFAVKRGEIFGLLGPNGAGKSTTFKMMCGLLVPTSGQALVL 389
Query: 64 GHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKFVE 123
G D+ + + R+ +G + Q SL LT +N+ +YGL+GR EKI + +
Sbjct: 390 GMDLKESSGKARQHLGYMAQKFSLYGNLTVEQNLRFFSGVYGLRGRAQNEKISRMSEAFG 449
Query: 124 LWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMKEE 183
L G ++RL +A +L+HEP+ILFLDEPT G+DP TR W +I +M E+
Sbjct: 450 LKSIASHATDELPLGFKQRLALACSLMHEPDILFLDEPTSGVDPLTRREFWLHINSMVEK 509
Query: 184 HEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVGND 229
+T+ +TTH+MDEAE DRI ++ GK+IA GT ++LK ND
Sbjct: 510 -GVTVMVTTHFMDEAE-YCDRIGLVYRGKLIASGTPDDLKAQSAND 553
Score = 134 bits (333), Expect = 2e-30
Identities = 93/310 (30%), Positives = 157/310 (50%), Gaps = 18/310 (5%)
Query: 4 IEVENLVKKYG--DFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAI 61
I + L K++ D AV + + G + +GP+GAGKTT + +L LLKP SG A
Sbjct: 6 ITLNGLEKRFPGMDKPAVAPLDCTIHAGYVTGLVGPDGAGKTTLMRMLAGLLKPDSGSAT 65
Query: 62 VAGHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKF 121
V G D +K + +G + Q L +LT EN+ ++ + + G K+ LL+F
Sbjct: 66 VIGFDPIKNDGALHAVLGYMPQKFGLYEDLTVMENLNLYADLRSVTGEARKQTFARLLEF 125
Query: 122 VELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMK 181
L F R SGGM+++L +A L+ EP++L LDEP +G+DP +R +W+ + +
Sbjct: 126 TSLGPFTGRLAGKLSGGMKQKLGLACTLVGEPKVLLLDEPGVGVDPISRRELWQMVHELA 185
Query: 182 EEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEEL-KKLVGNDIIYLKLESPKE 240
E M I +T Y+DEAEQ D + +++ G+++ +G + L + + G + + SP E
Sbjct: 186 GE-GMLILWSTSYLDEAEQCRD-VLLMNEGELLYQGEPKALTQTMAGRSFL---MTSPHE 240
Query: 241 ELKCLKADFIRGCKL--LPDGRVR---IDVENATEALPKLFELAQKNNVKILEVTYHRPT 295
+ L R KL + DG ++ + + EA P ++ + + + + P
Sbjct: 241 GNRKL---LQRALKLPQVSDGMIQGKSVRLILKKEATPD--DIRHADGMPEININETTPR 295
Query: 296 LNDVFLHLTG 305
D F+ L G
Sbjct: 296 FEDAFIDLLG 305
>emb|CAB37661.1| (AJ224479) cdd4-like protein [Bacillus sphaericus]
Length = 311
Score = 188 bits (473), Expect = 7e-47
Identities = 105/308 (34%), Positives = 179/308 (58%), Gaps = 8/308 (2%)
Query: 2 YAIEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAI 61
Y ++ +NL K +G AV I+ +++KGEI+ FLGPNGAGKTTT+ +L L+KP+SG
Sbjct: 11 YIVQTQNLSKNFGKEQAVSNINLQIRKGEIYGFLGPNGAGKTTTIRMLLGLMKPSSGTIK 70
Query: 62 VAGHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKF 121
+ D+VK+ ++ +G + ++PS LTAYEN+ I G+ K +I+E+L+
Sbjct: 71 IFQKDIVKDRIQILANVGSLVENPSYYPHLTAYENLEALRKILGVP----KTRIDEVLQT 126
Query: 122 VELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMK 181
V L ++ VK FS GM++RL IA AL+H PE+L LDEPT GLDP I I+ +
Sbjct: 127 VRLKEAANKKVKGFSLGMKQRLGIAAALLHNPELLILDEPTNGLDPSGIIEIRNLIKRLP 186
Query: 182 EEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVGNDIIYLKLESPKEE 241
+E+ MTI +++H + E +Q+A ++ I+ G +I + + E ++K + + K+ + ++
Sbjct: 187 KEYGMTIIISSHLLSEIDQMATQVGIVSKGTLIFQDSIEGMRKFAQPKVTF-KVSNGEKG 245
Query: 242 LKCLKADFIRGCKLLPDGRVRIDVENATEALPKLFELAQKNNVKILEVTYHRPTLNDVFL 301
+ L A+ G K V E + E + + ++ + + + V + +L D+FL
Sbjct: 246 WRSLLAN---GIKANYQDDVIFLEECSDEKVAHIVQVLVQEGISVFRVEEEKRSLEDIFL 302
Query: 302 HLTGREIR 309
+T E++
Sbjct: 303 QMTAGELK 310
>sp|P50332|NODI_RHIGA NODULATION ATP-BINDING PROTEIN I >gi|1001916|emb|CAA60881.1|
(X87578) nodI [Rhizobium galegae]
Length = 347
Score = 187 bits (471), Expect = 1e-46
Identities = 118/308 (38%), Positives = 179/308 (57%), Gaps = 12/308 (3%)
Query: 3 AIEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAIV 62
AI+++ + Y D T V +SF V+ GE F LGPNGAGK+T +L + P++GK V
Sbjct: 48 AIDLQAVTMIYRDKTVVDSLSFGVRAGECFGLLGPNGAGKSTITRMLLGMATPSAGKISV 107
Query: 63 AGHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKFV 122
G V + + R IG+V Q +LD E T EN+ + G + + R +++ I LL+F
Sbjct: 108 LGLPVPGKARLARASIGVVSQFDNLDMEFTVRENLLVFGRYFQMSTRAIEKLIPSLLEFA 167
Query: 123 ELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMKE 182
+L D V SGGM+RRL +ARAL+++P++L LDEPT GLDP R IWE +R++
Sbjct: 168 QLEAKADVRVSDLSGGMKRRLTLARALVNDPQLLILDEPTTGLDPPARHQIWERLRSLLI 227
Query: 183 EHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEEL-KKLVGNDIIYLKLESPKEE 241
+ TI LTTH MDEAE++ DR+ +++ G++IAEG L + ++G +I + +P +E
Sbjct: 228 RGK-TILLTTHMMDEAERMCDRLCVLEGGRMIAEGPPLSLIEDIIGCPVIEVYGGNP-DE 285
Query: 242 LKCLKADFIRGCKLLPDGRVRIDVENATEALPKLFELAQKNNVKILEVTYHRP-TLNDVF 300
L + + + + V N+ + KL E ++++LE RP L DVF
Sbjct: 286 LSLIVRPHVDRIETSGETLFCYTV-NSDQVRAKLREFP---SLRLLE----RPANLEDVF 337
Query: 301 LHLTGREI 308
L LTGRE+
Sbjct: 338 LRLTGREM 345
>sp|P08720|NODI_RHILV NODULATION ATP-BINDING PROTEIN I >gi|78028|pir||A24400 nodulation
protein nodI - Rhizobium leguminosarum
>gi|46214|emb|CAA68618.1| (Y00548) nodI [Rhizobium
leguminosarum] >gi|225122|prf||1209215A gene nodI
[Rhizobium leguminosarum]
Length = 311
Score = 187 bits (469), Expect = 2e-46
Identities = 118/313 (37%), Positives = 175/313 (55%), Gaps = 22/313 (7%)
Query: 3 AIEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAIV 62
AI++ + K YG V +SF + GE F LGPNGAGK+T ++ + P+ GK V
Sbjct: 12 AIDLAGVSKSYGGKIVVNDLSFTIAAGECFGLLGPNGAGKSTITRMILGMTSPSVGKITV 71
Query: 63 AGHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKFV 122
G + + R KIGIV Q +LD E T EN+ ++G + + RE++ I LL+F
Sbjct: 72 LGAQEPGQVRLARAKIGIVSQFDNLDLEFTVRENLLVYGRYFRMSTREIETVIPSLLEFA 131
Query: 123 ELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMKE 182
L + V SGGM+RRL +A ALI++P++L LDEPT GLDP R IWE +R++
Sbjct: 132 RLESKANTRVADLSGGMKRRLTLAGALINDPQLLILDEPTTGLDPHARHLIWERLRSLLA 191
Query: 183 EHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEEL-KKLVGNDIIYLKLESPKEE 241
+ TI LTTH M+EAE+L DR+ +++ G+ IAEG L ++ +G +I + P +E
Sbjct: 192 RGK-TILLTTHIMEEAERLCDRLCVLEAGRKIAEGRPHALIEEQIGCPVIEIYGGDP-QE 249
Query: 242 LKCLKADFIRGCKLLPDGRVRIDVENAT------EALPKLFELAQKNNVKILEVTYHRPT 295
L L + P+ R R+++ T + +L +N+++LE P
Sbjct: 250 LSLL---------IRPNAR-RLEISGETLFCYTPDPEQVRAQLRAYSNLRLLE---RPPN 296
Query: 296 LNDVFLHLTGREI 308
L DVFL LTGRE+
Sbjct: 297 LEDVFLRLTGREM 309
>pir||F82303 ABC transporter, ATP-binding protein VC0589 [imported] - Vibrio
cholerae (group O1 strain N16961)
>gi|9655020|gb|AAF93756.1| (AE004144) ABC transporter,
ATP-binding protein [Vibrio cholerae]
Length = 305
Score = 185 bits (465), Expect = 6e-46
Identities = 107/306 (34%), Positives = 182/306 (58%), Gaps = 11/306 (3%)
Query: 1 MYAIEVENLVKKY-GDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGK 59
MYA+E+E L K Y G F A+KGIS +VKKG+ +A LGPNGAGK+TT+ ++++L+ TSGK
Sbjct: 1 MYALEIEQLRKTYAGGFEALKGISLQVKKGDFYALLGPNGAGKSTTIGIISSLVNKTSGK 60
Query: 60 AIVAGHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELL 119
V G+D+ + + ++K+G+V Q+ + + T + + YG+ KE+ ++ L
Sbjct: 61 VTVFGYDLDSQLELAKQKLGLVPQEFNFNPFETVEQIVLQQAGYYGVPKALAKERAKKYL 120
Query: 120 KFVELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRT 179
++LW + + SGGM+RRL IARAL+HEP++L LDEPT G+D + R +WE+++
Sbjct: 121 TQLDLWEKRSERARNLSGGMKRRLMIARALMHEPQLLILDEPTAGVDIELRRSMWEFLKQ 180
Query: 180 MKEEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEEL--KKLVGNDIIYLKLES 237
+ + +TI LTTHY++EAE L I II G++I T + L K V ++ + +
Sbjct: 181 INAQ-GVTIILTTHYLEEAEMLCRHIGIIQRGELIENTTMKSLLGKLHVETFVLDVDGNA 239
Query: 238 PKEELKCLKADFIRGCKLLPDGRVRIDVENATEALPKLFELAQKNNVKILEVTYHRPTLN 297
P L+ + + + +G + I++E ++ + +F + VK+L + L
Sbjct: 240 PIAPLQGVVK------QQMVEGSLEIELEK-SQGINHVFTQLTEQGVKVLSMRNKVNRLE 292
Query: 298 DVFLHL 303
++F+ +
Sbjct: 293 ELFVSI 298
>sp|P26050|NODI_BRAJA NODULATION ATP-BINDING PROTEIN I >gi|281683|pir||S27496 nodI
protein - Bradyrhizobium japonicum
>gi|152117|gb|AAA26229.1| (J03685) nodI gene product
[Bradyrhizobium japonicum]
Length = 306
Score = 184 bits (462), Expect = 1e-45
Identities = 110/307 (35%), Positives = 170/307 (54%), Gaps = 10/307 (3%)
Query: 3 AIEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAIV 62
AI++ + K +GD V +SF V +GE F LGPNGAGK+T +L ++ P GK V
Sbjct: 7 AIDLVGVRKSFGDKVIVNDLSFSVARGECFGLLGPNGAGKSTIARMLLGMISPDRGKITV 66
Query: 63 AGHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKFV 122
V + R +G+V Q +L+ E T EN+ + G +G+ R ++ + LL+F
Sbjct: 67 LDEPVPSRARAARVAVGVVPQFDNLEPEFTVRENLLVFGRYFGMSARTIEAVVPSLLEFA 126
Query: 123 ELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMKE 182
L D V SGGM+RRL +ARALI++P +L +DEPT GLDP R IWE +R +
Sbjct: 127 RLESKADVRVSLLSGGMKRRLTLARALINDPHLLVMDEPTTGLDPHARHLIWERLRALLA 186
Query: 183 EHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEEL-KKLVGNDIIYLKLESPKEE 241
+ TI LTTH+M+EAE+L DR+ +++ G IAEG + L + +G ++I + ++
Sbjct: 187 RGK-TILLTTHFMEEAERLCDRLCVLESGCKIAEGKPDALIDEHIGCNVIEI-YGGDLDQ 244
Query: 242 LKCLKADFIRGCKLLPDGRVRIDVENATEALPKLFELAQKNNVKILEVTYHRPTLNDVFL 301
L+ L + R ++ G + + L + ++++L+ P L DVFL
Sbjct: 245 LRELIRPYARHIEV--SGETLFCYARCPDEIS--VHLRGRTDLRVLQ---RPPNLEDVFL 297
Query: 302 HLTGREI 308
LTGRE+
Sbjct: 298 RLTGREM 304
>sp|P42332|BCRA_BACLI BACITRACIN TRANSPORT ATP-BINDING PROTEIN BCRA
>gi|7445603|pir||S77627 bacitracin transport protein
bcrA - Bacillus licheniformis >gi|437315|gb|AAA99504.1|
(L20573) TTG start codon [Bacillus licheniformis]
Length = 306
Score = 184 bits (462), Expect = 1e-45
Identities = 109/303 (35%), Positives = 172/303 (55%), Gaps = 7/303 (2%)
Query: 4 IEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAIVA 63
I+ +L K YG +V ++ VK+G+I+ FLG NGAGKTTT+ +L L+KPTSG+ +
Sbjct: 5 IKTTDLTKMYGSQKSVDHLNINVKQGDIYGFLGRNGAGKTTTIRMLLGLIKPTSGQIEIF 64
Query: 64 GHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKFVE 123
G + K +E+ ++IG + + P LTA EN+ I+ I G+ K I+E+L+ V
Sbjct: 65 GENFFKNKKEILRRIGSIVEVPGFYANLTARENLLINAKIIGI---HKKNAIDEVLEIVG 121
Query: 124 LWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMKEE 183
L + V FS GM++RL IARAL+H PE+L LDEPT GLDP + I ++ +E
Sbjct: 122 LQHETKKLVGKFSLGMKQRLGIARALLHYPELLILDEPTNGLDPIGIKEMRRLIHSLAKE 181
Query: 184 HEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVGNDIIYLKLESPKEELK 243
+TIF+++H + E EQL D + II GK++ E + LKK + +L + +
Sbjct: 182 RNITIFISSHILSEIEQLVDHVGIIHEGKLLEEIPFDHLKKR-NRKYLEFQLSDQNKAVV 240
Query: 244 CLKADF-IRGCKLLPDGRVRIDVENATEALPKLFELAQKNNVKILEVTYHRPTLNDVFLH 302
++ F I ++ DG +R+ + KL +L +N + +L++T +L D F+
Sbjct: 241 LMEQHFDIHDYEVHQDGIIRVYSHLGQQG--KLNKLFVENGIDVLKITMSEDSLEDYFVK 298
Query: 303 LTG 305
L G
Sbjct: 299 LIG 301
>prf||1914270A nodulation protein [Bradyrhizobium japonicum]
Length = 306
Score = 183 bits (460), Expect = 2e-45
Identities = 115/311 (36%), Positives = 167/311 (52%), Gaps = 18/311 (5%)
Query: 3 AIEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAIV 62
AI++ + K +GD V +SF V +GE F LGPNGAGK+T +L ++ P GK V
Sbjct: 7 AIDLVGVRKSFGDKVIVNDLSFSVARGECFGLLGPNGAGKSTIARMLLGMISPDRGKITV 66
Query: 63 AGHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKFV 122
V + R +G+V Q +L+ E T EN+ + G +G+ R ++ + LL+F
Sbjct: 67 LDEPVPSRARAARVAVGVVPQFDNLEPEFTVRENLLVFGRYFGMSARTIEAVVPSLLEFA 126
Query: 123 ELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMKE 182
L D V SGGM+RRL +ARALI++P +L +DEPT GLDP R IWE +R +
Sbjct: 127 RLESKADVRVSLLSGGMKRRLTLARALINDPHLLVMDEPTTGLDPHARHLIWERLRALLA 186
Query: 183 EHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEEL-KKLVGNDIIYLKLESPKEE 241
+ TI LTTH+M+EAE+L DR+ +++ G IAEG + L + +G ++I E
Sbjct: 187 RGK-TILLTTHFMEEAERLCDRLCVLESGCKIAEGKPDALIDEHIGCNVI---------E 236
Query: 242 LKCLKADFIRGCKLLPDGRVRIDVENAT----EALPKLFELAQKNNVKILEVTYHRPTLN 297
+ D +R +L+ RI+V T P + + L V P L
Sbjct: 237 IYGGDLDQLR--ELIRPYAHRIEVSGETLFCYARCPDEISVHLRGRTD-LRVLQRPPNLE 293
Query: 298 DVFLHLTGREI 308
DVFL LTGRE+
Sbjct: 294 DVFLRLTGREM 304
>sp|P23703|NODI_RHILO NODULATION ATP-BINDING PROTEIN I >gi|95215|pir||S13590 nodulation
protein nodI - Rhizobium meliloti
>gi|581510|emb|CAA39236.1| (X55705) nodulation gene;
integral membrane protein; homology to Rhizobium
leguminosarum nodI [Mesorhizobium loti]
Length = 339
Score = 182 bits (458), Expect = 4e-45
Identities = 112/310 (36%), Positives = 167/310 (53%), Gaps = 12/310 (3%)
Query: 3 AIEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAIV 62
A++ + K YG+ V +SF V GE F LGPNGAGK+T +L + P +G V
Sbjct: 40 AVDFAGVTKSYGNKIVVDELSFSVASGECFGLLGPNGAGKSTIARMLLGMTCPDAGAITV 99
Query: 63 AGHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKFV 122
G V + R+ IG+V Q +LD+ELT EN+ + G +G+ R+ + I LL+F
Sbjct: 100 LGVPVPARARLARRGIGVVPQFDNLDQELTVRENLLVFGRYFGMSTRQSEAVIPSLLEFA 159
Query: 123 ELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMKE 182
L R + V SGGM+R L +ARALI++P+++ +DEPT GLDP R IWE +R +
Sbjct: 160 RLERKANARVSELSGGMKRCLTMARALINDPQLIVMDEPTTGLDPHARHLIWERLRALLA 219
Query: 183 EHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEEL-KKLVGNDIIYLKLESPKEE 241
+ TI LTTH+M+EAE+L DR+ +++ G+ IAEG + L + +G ++ + P E
Sbjct: 220 RGK-TIILTTHFMEEAERLCDRLCVLEKGRNIAEGGPQALIDEHIGCQVMEIYGGDPHEL 278
Query: 242 LKCLKADFIRGCKLLPDGRVRIDVENATEALPKLFEL-AQKNNVKILEVTYHRPTLNDVF 300
L +K R+ + E P ++ Q L + L DVF
Sbjct: 279 LSLVKPH---------SQRIEVSGETLYCYAPDPDQVRTQLQGRAGLRLLLRPANLEDVF 329
Query: 301 LHLTGREIRD 310
L LTGRE+ +
Sbjct: 330 LRLTGREMEE 339
>pir||T31682 bcrA protein - Bacillus licheniformis >gi|4464278|gb|AAD21213.1|
(AF007865) BcrA [Bacillus licheniformis]
Length = 306
Score = 181 bits (454), Expect = 1e-44
Identities = 107/302 (35%), Positives = 169/302 (55%), Gaps = 5/302 (1%)
Query: 4 IEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAIVA 63
I+ +L K YG +V ++ VK+G+I+ FLG NGAGKTTT+ +L L+KPTSG+ +
Sbjct: 5 IKTTDLTKMYGSQKSVDHLNINVKQGDIYGFLGRNGAGKTTTIRMLLGLIKPTSGQIEIF 64
Query: 64 GHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKFVE 123
G + K +E+ ++IG + + P LTA EN+ I+ I G+ K I+E+L+ V
Sbjct: 65 GENFFKNKKEILRRIGSIVEVPGFYANLTARENLLINAKIIGI---HKKNAIDEVLEIVG 121
Query: 124 LWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMKEE 183
L + V FS GM++RL IARAL+H PE+ LDEPT GLDP + I ++ +E
Sbjct: 122 LQHETKKLVGKFSLGMKQRLGIARALLHYPELSILDEPTNGLDPIGIKEMRRLIHSLAKE 181
Query: 184 HEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVGNDIIYLKLESPKEELK 243
+TIF+++H + E EQL D + II GK++ E + LKK + + + K +
Sbjct: 182 RNITIFISSHILSEIEQLVDHVGIIHEGKLLEEIPFDHLKKRNRKYLEFQLSDQNKAVVL 241
Query: 244 CLKADFIRGCKLLPDGRVRIDVENATEALPKLFELAQKNNVKILEVTYHRPTLNDVFLHL 303
+ I ++ DG +R+ + KL +L +N + +L++T +L D F+ L
Sbjct: 242 MEQHSDIHDYEVHQDGIIRVYSHLGQQG--KLNKLFVENGIDVLKITMSEDSLEDYFVKL 299
Query: 304 TG 305
G
Sbjct: 300 IG 301
>pir||T44443 gliding motility protein [imported] - Flavobacterium johnsoniae
>gi|2281663|gb|AAC19751.1| (AF007381) gliding motility
protein [Flavobacterium johnsoniae]
Length = 298
Score = 179 bits (450), Expect = 3e-44
Identities = 104/302 (34%), Positives = 164/302 (53%), Gaps = 6/302 (1%)
Query: 3 AIEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAIV 62
+IEV ++ K YG+ A+ ISFK++KGEI FLGPNGAGK+T + +LTT L SG A+V
Sbjct: 2 SIEVNSISKSYGEQKALNEISFKIEKGEIVGFLGPNGAGKSTLMKILTTYLLADSGSALV 61
Query: 63 AGHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKFV 122
GHDV+ + V++ IG + + L +L E + + +Y + K +IEE+++
Sbjct: 62 NGHDVMTNAKAVQQSIGYLPEHNPLYLDLYVREYLAFNADVYKVP----KSRIEEVIQLT 117
Query: 123 ELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMKE 182
L + + S G ++R+ +A AL+H P++L LDEPT GLDP I I+ + +
Sbjct: 118 GLTPESHKKISQLSKGYRQRVGLANALLHNPDVLILDEPTTGLDPNQLMEIRNVIKNIGK 177
Query: 183 EHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVGNDIIYLKLESPKEEL 242
+ TIFL+TH M E E + DR+ IID G+I+A+ + L +I ++ + EE
Sbjct: 178 --DKTIFLSTHIMQEVEAICDRVIIIDKGQIVADNKLDHLVAADKEQVIEVEFDYQIEEQ 235
Query: 243 KCLKADFIRGCKLLPDGRVRIDVENATEALPKLFELAQKNNVKILEVTYHRPTLNDVFLH 302
K + I K D + + P +F+ A +N +K L++ L VF
Sbjct: 236 LLAKLENIASYKNTHDMTWELTFITDKDMRPAIFDFANENGLKTLQLNQKNKNLEAVFRE 295
Query: 303 LT 304
+T
Sbjct: 296 IT 297
>sp|P54592|YHCH_BACSU HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PROTEIN 2 IN GLPD-CSPB
INTERGENIC REGION >gi|7445695|pir||D69822 ABC
transporter (ATP-binding protein) homolog yhcH -
Bacillus subtilis >gi|1239983|emb|CAA65691.1| (X96983)
hypothetical protein [Bacillus subtilis]
>gi|2633231|emb|CAB12736.1| (Z99108) similar to ABC
transporter (ATP-binding protein) [Bacillus subtilis]
Length = 305
Score = 178 bits (446), Expect = 1e-43
Identities = 103/309 (33%), Positives = 177/309 (56%), Gaps = 13/309 (4%)
Query: 4 IEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAIVA 63
+E++N+ K T + +SF +++GE+F FLGPNGAGKTTT+ ++ L+K + G ++
Sbjct: 5 LELKNVTKNIRGRTIIDDLSFTIREGEVFGFLGPNGAGKTTTIRMMVGLMKLSKGDVLIC 64
Query: 64 GHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHG-MIYGLKGRELKEKIEELLKFV 122
G + KE + K IG + ++P L + L+ Y+N+ M+ G+ KEKI+E+++ V
Sbjct: 65 GQSITKEYAKAIKHIGAIVENPELYKFLSGYKNLQQFARMVKGVT----KEKIDEVVELV 120
Query: 123 ELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMKE 182
L VK +S GM++RL +A+ L+H+P++L LDEPT GLDP I ++++ +
Sbjct: 121 GLTDRIHDKVKTYSLGMRQRLGLAQCLLHDPKVLILDEPTNGLDPAGIREIRDHLKKLTR 180
Query: 183 EHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVGNDIIYLKLESPKEEL 242
E M + +++H + E E + DRIAI+ GK+I ++ + + ND + ++E P E
Sbjct: 181 ERGMAVIVSSHLLSEMELMCDRIAILQKGKLIDIQNVKD-ENIDENDTYFFQVEQPSE-- 237
Query: 243 KCLKADFIRGCKLLPDGRVRIDVENATEALPKLFELAQKNNVKILEVTYHRPTLNDVFLH 302
A + LL ++++ A E +P + EL ++I EV +L D FL
Sbjct: 238 ---AATVLNQYDLLSKTN-GVEIKLAKEEVPAVIELLVMQQIRIYEVKVITKSLEDRFLE 293
Query: 303 LTGREIRDE 311
+TG E ++E
Sbjct: 294 MTG-ETKEE 301
>gb|AAK41395.1| ABC transporter, ATP binding protein [Sulfolobus solfataricus]
Length = 275
Score = 177 bits (445), Expect = 1e-43
Identities = 99/226 (43%), Positives = 147/226 (64%), Gaps = 8/226 (3%)
Query: 1 MYAIEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKA 60
MY IEV N+ K YG A + I+ +VK+GEI A LGPNGAGKTT V + L PT G+
Sbjct: 1 MYVIEVNNVWKAYGKIIANEDITMRVKEGEIVALLGPNGAGKTTLVKQIYGELTPTKGEI 60
Query: 61 IVAGHDVVKEPQE--VRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEEL 118
V G K+P + V+K +G++ Q+ +LT ++N+Y G + G E+K++ EEL
Sbjct: 61 RVLG----KKPTDRHVKKFLGVIPQECEPYGDLTVWDNIYYMGRLKGASKDEIKKRGEEL 116
Query: 119 LKFVELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIR 178
L+ ++L ++ + SGG++RR IA ALI+ P++L LDEPT GLDP+ R +WE +
Sbjct: 117 LERLDLRSKRNTLARDLSGGLKRRTLIAMALINNPKLLILDEPTTGLDPEARREVWEILL 176
Query: 179 TMKEEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKK 224
M++E + ++ LTTHY+DEAE+LAD+I + KII EGT ++K+
Sbjct: 177 NMRKEGQ-SMLLTTHYLDEAERLADKIYFLSR-KIIVEGTPTQIKE 220
>gi|11498898 ABC transporter, ATP-binding protein [Archaeoglobus fulgidus]
>gi|7445659|pir||C69412 ABC transporter, ATP-binding
protein homolog - Archaeoglobus fulgidus
>gi|2649279|gb|AAB89946.1| (AE001014) ABC transporter,
ATP-binding protein [Archaeoglobus fulgidus]
Length = 303
Score = 176 bits (443), Expect = 2e-43
Identities = 111/309 (35%), Positives = 169/309 (53%), Gaps = 16/309 (5%)
Query: 1 MYAIEVENLVKKYGDF-----TAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKP 55
M A+E ++ Y F A++GI ++ G IF LGPNGAGKTT + +L+T+L P
Sbjct: 1 MRAVECRDVWMVYRTFMERGIVALRGIDLDIEDGVIFGLLGPNGAGKTTLISILSTILIP 60
Query: 56 TSGKAIVAGHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKI 115
T G+ + G D K ++VR++I I + + YE + + M YG+ R + +
Sbjct: 61 TKGEVRILGMDAFKNTRKVRERINIS-SGVRMPWGMKVYECLRFYAMCYGITDRRV---V 116
Query: 116 EELLKFVELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWE 175
+ ++ EL +++ S G +++ +ARA +++PE++FLDEPT LDP I +
Sbjct: 117 DRVISEFELEEHRNKRFDDLSTGNKQKANLARAFLNDPEVVFLDEPTANLDPDMAKKIRQ 176
Query: 176 YIRTMKEEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVG-NDIIYLK 234
I +KEE ++TI LTTH M EAE L DRIA I GKI+AEGTSEELKK ++ + LK
Sbjct: 177 MILRIKEEKDVTIVLTTHNMREAEMLCDRIAFIKEGKIVAEGTSEELKKYTKMSERVILK 236
Query: 235 LESPKEELKCLKADFIRGCKLLPDGRVRIDVENATEALPKLFELAQKNNVKILEVTYHRP 294
L+ ++L + G L+ VE+A +ALP + + V +
Sbjct: 237 LKGNAKKLHIPYPYRMDGNTLI------AFVEDAEKALPSIVVRLAEQGVFVESAKMEEI 290
Query: 295 TLNDVFLHL 303
TL DVF+ L
Sbjct: 291 TLEDVFIEL 299
>pir||B72334 ABC transporter, ATP-binding protein - Thermotoga maritima (strain
MSB8) >gi|4981322|gb|AAD35875.1|AE001747_18 (AE001747)
ABC transporter, ATP-binding protein [Thermotoga
maritima]
Length = 260
Score = 176 bits (441), Expect = 4e-43
Identities = 96/245 (39%), Positives = 151/245 (61%), Gaps = 7/245 (2%)
Query: 4 IEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAIVA 63
I L +K+GDFTAV I V+ GEI+ FLGPNGAGKTTT+ +LT +LKPT G+ +
Sbjct: 12 IVARGLTRKFGDFTAVDHIDLSVRPGEIYGFLGPNGAGKTTTIKMLTGVLKPTEGEVEIL 71
Query: 64 GHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKFVE 123
G + E++K IG++ +P + LT E + IY LK E+ ++I EL + +
Sbjct: 72 GMKMSTHEIEIKKSIGVIPDEPKIYSHLTGKEFLDFIIEIYDLKEEEIDKRIAELCEAFK 131
Query: 124 LWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMKEE 183
+ + + V S GM+++L + + +P+++FLDEPT+GLD ++ A I + + +
Sbjct: 132 V-DYLGKRVGEMSHGMKQKLMLVSVFMRKPKVIFLDEPTVGLDAKS-ARILKLLLRKYAD 189
Query: 184 HEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVGN-----DIIYLKLESP 238
IFLTTH ++ AE++ DRI II+ G++IAEGT EEL+KL G + ++L+L +
Sbjct: 190 EGAAIFLTTHILEIAEKMCDRIGIINKGRLIAEGTMEELRKLAGQKEASLEDLFLQLTAE 249
Query: 239 KEELK 243
EE++
Sbjct: 250 GEEIE 254
>pir||T07717 probable ABC-type transport protein T23J7.110 - Arabidopsis
thaliana >gi|4741195|emb|CAB41861.1| (AL049746) ABC
transporter-like protein [Arabidopsis thaliana]
Length = 900
Score = 176 bits (441), Expect = 4e-43
Identities = 110/314 (35%), Positives = 169/314 (53%), Gaps = 16/314 (5%)
Query: 2 YAIEVENLVKKYGDFT------AVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKP 55
+AI +NL K Y AV+G+S V GE F LGPNGAGKT+ ++++T LLKP
Sbjct: 576 HAIVCDNLKKVYPGRDGNPPKLAVRGLSLAVPSGECFGMLGPNGAGKTSFINMMTGLLKP 635
Query: 56 TSGKAIVAGHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKI 115
TSG A+V G D+ + V +G+ Q L LT E++ +G + LKG +L + +
Sbjct: 636 TSGTALVQGLDICNDMDRVYTSMGVCPQHDLLWETLTGREHLLFYGRLKNLKGADLNQAV 695
Query: 116 EELLKFVELWR--FKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHI 173
EE LK V L+ D+P +SGGM+RRL +A +LI P+++++DEP+ GLDP +R ++
Sbjct: 696 EESLKSVNLFHGGVADKPAGKYSGGMKRRLSVAISLIGNPKVVYMDEPSTGLDPASRKNL 755
Query: 174 WEYIRTMKEEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVGNDIIYL 233
W I+ K+ I LTTH M+EAE L DR+ I G + G +ELK G ++
Sbjct: 756 WTVIKRAKQ--NTAIILTTHSMEEAEFLCDRLGIFVDGGLQCIGNPKELKGRYGGSYVFT 813
Query: 234 KLESPKEE--LKCLKADFIRGCKLLPD--GRVRIDVENATEALPKLFELAQ--KNNVKIL 287
S + E ++ L D K + G + ++ + ++F+ + K+N +
Sbjct: 814 MTTSSEHEQNVEKLIKDVSPNAKKIYHIAGTQKFELPKEEVRISEVFQAVEKAKSNFTVF 873
Query: 288 EVTYHRPTLNDVFL 301
TL DVF+
Sbjct: 874 AWGLADTTLEDVFI 887
>dbj|BAB10070.1| (AB010069) contains similarity to ABC transporter~gene_id:K11J9.23
[Arabidopsis thaliana]
Length = 917
Score = 176 bits (441), Expect = 4e-43
Identities = 99/248 (39%), Positives = 144/248 (57%), Gaps = 10/248 (4%)
Query: 2 YAIEVENLVKKYGDFT------AVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKP 55
+AI +NL K Y AV+G+ V GE F LGPNGAGKT+ + ++T LLKP
Sbjct: 593 HAILCDNLKKVYPGRDGNPPKMAVRGLYLSVSSGECFGMLGPNGAGKTSFISMMTGLLKP 652
Query: 56 TSGKAIVAGHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKI 115
+SG A+V G D+ K+ +V +G+ Q L LT E++ +G + +KG +L + +
Sbjct: 653 SSGTALVQGLDICKDMNKVYTSMGVCPQHDLLWETLTGREHLLFYGRLKNIKGSDLTQAV 712
Query: 116 EELLKFVELW--RFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHI 173
EE LK V L+ D+P +SGGM+RRL +A +LI P++++LDEP+ GLDP +R ++
Sbjct: 713 EESLKSVSLYDGGVGDKPAGNYSGGMKRRLSVAISLIGNPKVVYLDEPSTGLDPASRKNL 772
Query: 174 WEYIRTMKEEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVGNDIIYL 233
W I+ K+ I LTTH M+EAE L DR+ I G + G S+ELK G ++
Sbjct: 773 WNVIKRAKQ--NTAIILTTHSMEEAEFLCDRLGIFVDGGLQCIGNSKELKSRYGGSYVFT 830
Query: 234 KLESPKEE 241
S K E
Sbjct: 831 MTTSSKHE 838
>gb|AAC80570.1| (AF105431) NodI [Bradyrhizobium sp. SNU001]
Length = 305
Score = 175 bits (439), Expect = 7e-43
Identities = 108/307 (35%), Positives = 168/307 (54%), Gaps = 11/307 (3%)
Query: 3 AIEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAIV 62
AI++ + K +GD V +SF V +GE F LGPNGAGK+T +L ++ P GK V
Sbjct: 7 AIDLVGVRKSFGDKVIVNDLSFSVARGECFGLLGPNGAGKSTIARMLLGMIWPDRGKITV 66
Query: 63 AGHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKFV 122
V + R+ +G+V Q +L+ E T EN+ + G +G+ R ++ + LL+F
Sbjct: 67 LDEPVPSRAR-ARRGVGVVPQFDNLEPEFTVRENLLVFGRYFGMSARTIEAVVPSLLEFA 125
Query: 123 ELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMKE 182
L D V GGM+RRL +ARALI++P +L +DEPT GLDP R IWE +R +
Sbjct: 126 RLESKADVRVSLLGGGMKRRLTLARALINDPHLLVMDEPTTGLDPHARHLIWERLRALLA 185
Query: 183 EHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEEL-KKLVGNDIIYLKLESPKEE 241
+ TI LTTH+M+EAE+L D + +++ G IAEG + L + +G ++I + ++
Sbjct: 186 RGK-TILLTTHFMEEAERLCDPLCVLESGCKIAEGEPDALIDEHIGCNVIEI-YGGDLDQ 243
Query: 242 LKCLKADFIRGCKLLPDGRVRIDVENATEALPKLFELAQKNNVKILEVTYHRPTLNDVFL 301
L+ L + R ++ G + + L + +++L+ P L DVFL
Sbjct: 244 LRELIRPYARHIEV--SGETLFCYARCPDEIS--VHLRGRTGLRVLQ---RPPNLEDVFL 296
Query: 302 HLTGREI 308
LTGRE+
Sbjct: 297 RLTGREM 303
>sp|P36879|YADG_ECOLI HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PROTEIN YADG
>gi|628771|pir||S45204 probable ABC-type transport
protein yagD - Escherichia coli
>gi|473794|dbj|BAA05583.1| (D26562) 'ORF' [Escherichia
coli] >gi|1786319|gb|AAC73238.1| (AE000122) putative
ATP-binding component of a transport system [Escherichia
coli K12]
Length = 308
Score = 174 bits (437), Expect = 1e-42
Identities = 99/309 (32%), Positives = 179/309 (57%), Gaps = 7/309 (2%)
Query: 3 AIEVENLVKKY-GDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAI 61
A+E++ L K Y G A++GI +V+ G+ +A LGPNGAGK+TT+ ++++L+ TSG+
Sbjct: 4 ALELQQLKKTYPGGVQALRGIDLQVEAGDFYALLGPNGAGKSTTIGIISSLVNKTSGRVS 63
Query: 62 VAGHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKF 121
V G+D+ K+ ++++G+V Q+ + + T + + YG++ +E + E+ LK
Sbjct: 64 VFGYDLEKDVVNAKRQLGLVPQEFNFNPFETVQQIVVNQAGYYGVERKEAYIRSEKYLKQ 123
Query: 122 VELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMK 181
++LW ++ + SGGM+RRL IARAL+HEP++L LDEPT G+D + R +W +++ +
Sbjct: 124 LDLWGKRNERARMLSGGMKRRLMIARALMHEPKLLILDEPTAGVDIELRRSMWGFLKDLN 183
Query: 182 EEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVGNDIIYLKLESPKEE 241
++ TI LTTHY++EAE L I II HG+++ + + L + ++ L L +PK
Sbjct: 184 DK-GTTIILTTHYLEEAEMLCRNIGIIQHGELVENTSMKALLAKLKSETFILDL-APKSP 241
Query: 242 LKCLKADFIRGCKLLPDGRVRIDVENATEALPKLFELAQKNNVKILEVTYHRPTLNDVFL 301
L L R L+ + ++V + + +F + +++L + L ++F+
Sbjct: 242 LPKLDGYQYR---LVDTATLEVEVLR-EQGINSVFTQLSEQGIQVLSMRNKANRLEELFV 297
Query: 302 HLTGREIRD 310
L + D
Sbjct: 298 SLVNEKQGD 306
>pir||S76626 ABC-type transport protein sll0489 - Synechocystis sp. (strain PCC
6803) >gi|1001733|dbj|BAA10570.1| (D64004) ABC
transporter [Synechocystis sp.]
Length = 342
Score = 173 bits (435), Expect = 2e-42
Identities = 110/320 (34%), Positives = 177/320 (54%), Gaps = 14/320 (4%)
Query: 4 IEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAIVA 63
IEVE+L K YG TA++ + F V+KGEI FLGPNGAGKTTT+ +L + T+G VA
Sbjct: 2 IEVEHLSKVYGSTTAIQNVDFSVQKGEILGFLGPNGAGKTTTMRILAGYIPATTGTVRVA 61
Query: 64 GHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKFVE 123
G DV ++ VRK+IG + ++P L ++T + I G+K + ++++ ++ +
Sbjct: 62 GFDVHEQSLAVRKRIGYLPENPPLYGDMTVASFLNFVASIKGVKPGDRRQRVIWAMERCQ 121
Query: 124 LWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMKEE 183
L + ++ S G ++R+ IA+A++H+P ++ LDEPT+GLDP+ + I+++ E+
Sbjct: 122 LTEKRKVLIRKLSKGFKQRVGIAQAIVHDPAVIILDEPTVGLDPKQIIEVRNLIKSLAED 181
Query: 184 HEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVGNDIIYLKLESPKEE-- 241
H TI L+TH + E DR+ II+ G+++A T + L + ++ Y +LE E
Sbjct: 182 H--TIILSTHILPEVSMTCDRVTIINQGRVVATNTPDNLLAELKGNLSY-QLEVAGAEGM 238
Query: 242 -----LKCLKADFIRGCKLLPDGRVRIDVENATEALPKL-FELAQ---KNNVKILEVTYH 292
L+ L K P + R + + L +L +LAQ + E+
Sbjct: 239 AIAHCLQSLPGVEEVQTKTHPQQQERQQILVRSNQLEELGQQLAQAIVTQGWDLYEMQRL 298
Query: 293 RPTLNDVFLHLTGREIRDEE 312
RPTL DVFL+L E DEE
Sbjct: 299 RPTLEDVFLNLITSEAVDEE 318
>gi|11498736 ABC transporter, ATP-binding protein [Archaeoglobus fulgidus]
>gi|7445762|pir||G69391 ABC transporter, ATP-binding
protein homolog - Archaeoglobus fulgidus
>gi|2649451|gb|AAB90107.1| (AE001025) ABC transporter,
ATP-binding protein [Archaeoglobus fulgidus]
Length = 294
Score = 173 bits (435), Expect = 2e-42
Identities = 105/305 (34%), Positives = 172/305 (55%), Gaps = 12/305 (3%)
Query: 1 MYAIEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKA 60
M IEVENL K + F A+ GIS V++GEIF FLGPNGAGKTTT++ L+KPTSG
Sbjct: 1 MAQIEVENLTKVFNGFRALDGISLVVERGEIFGFLGPNGAGKTTTINCCLGLIKPTSGSV 60
Query: 61 IVAGHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLK 120
+AG DV ++P EV++ G + ++ LTA +N+ Y K+ ++ELL
Sbjct: 61 RIAGMDVEEKPVEVKEICGYLPENYGFYPNLTARQNLLYFSEFYA----NPKDNVDELLA 116
Query: 121 FVELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTM 180
V L D+ V FS GM++RL +A+ALI++PE++FLDEPT GLDPQ A + IR +
Sbjct: 117 LVGLQDSADKKVGEFSRGMKQRLALAQALINDPEVVFLDEPTNGLDPQGIADFRKIIREL 176
Query: 181 KEEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVGNDIIYLKLESPKE 240
++ + T F ++H + E ++ + II+ G+I+ G ++ +L G+ + ++ E +
Sbjct: 177 NQKGK-TFFFSSHILSEVREVCSVVGIINRGRIVKVG---KISELSGSMEVVVQTEPRAD 232
Query: 241 ELKCLKADFIRGCKLLPDGRVRIDVENATEALPKLFELAQKNNVKILEVTYHRPTLNDVF 300
E + + + ++++ + E LFE + + E++ P+L ++
Sbjct: 233 ESLLREFGEVEYDESRDVYVIKVESDCRVEISRTLFE----HGFVVKELSLREPSLEKIY 288
Query: 301 LHLTG 305
L + G
Sbjct: 289 LSMVG 293
>pir||T36000 probable ABC-type transport system ATP-binding chain - Streptomyces
coelicolor >gi|5459395|emb|CAB50753.1| (AL096839)
putative ABC transporter, ATP-binding subunit
[Streptomyces coelicolor A3(2)]
Length = 307
Score = 173 bits (435), Expect = 2e-42
Identities = 110/314 (35%), Positives = 170/314 (54%), Gaps = 22/314 (7%)
Query: 4 IEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAIVA 63
++V+ LVK+YG TAV G+ + G + A LGPNGAGKTTTV +P SG V
Sbjct: 7 VQVQALVKRYGTKTAVNGLDLVARTG-VTAVLGPNGAGKTTTVETCEGYRRPDSGTVRVL 65
Query: 64 GHDVVKEPQEVRKKIGIVFQDPSL------DRELTAYENMYIHGMIYGLKGRELKEKIEE 117
G D V++ E+R +IG++ Q + D L ++ H + ++
Sbjct: 66 GLDPVRQGAELRPRIGVMLQSGGVYSGARADEMLRHVAKLHAHPL-----------DVDA 114
Query: 118 LLKFVELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYI 177
L++ + L + SGG Q+RL +A A++ PE++FLDEPT GLDPQ R W+ +
Sbjct: 115 LIERLGLDSCGRTTYRRLSGGQQQRLALAMAVVGRPELVFLDEPTAGLDPQARRATWDLV 174
Query: 178 RTMKEEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVGNDIIYLKLES 237
R ++ + +++ LTTH+MDEAEQLAD +AIID G+++A+G+ EEL + + +
Sbjct: 175 RDLRGD-GVSVILTTHHMDEAEQLADDVAIIDTGRVVAQGSPEELCRGGAENTLRFTGRP 233
Query: 238 PKEELKCLKA--DFIRGCKLLPDGRVRIDVENATEALPKLFELAQKNNVKILEVTYHRPT 295
+ LKA +L P G R++ E + L + ++ V ++ R T
Sbjct: 234 GLDVASLLKALPPDSAAAELTP-GSYRVNGEVDPQLLATVTSWCAQHGVMPDRISVERHT 292
Query: 296 LNDVFLHLTGREIR 309
L DVFL LTG+E+R
Sbjct: 293 LEDVFLELTGKELR 306
>pir||T07714 probable ABC-type transport protein T23J7.80 - Arabidopsis thaliana
>gi|4741192|emb|CAB41858.1| (AL049746) ABC
transporter-like protein [Arabidopsis thaliana]
Length = 895
Score = 173 bits (433), Expect = 3e-42
Identities = 105/292 (35%), Positives = 160/292 (53%), Gaps = 10/292 (3%)
Query: 18 AVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAIVAGHDVVKEPQEVRKK 77
AV G+S V GE F LGPNGAGKT+ ++++T L+KPTSG A+V D+ ++ +V
Sbjct: 593 AVGGLSIAVPPGECFGMLGPNGAGKTSFINMMTGLVKPTSGTALVESLDICQDMDKVYTS 652
Query: 78 IGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKFVELWR--FKDRPVKYF 135
+G+ Q L LT E++ +G + LKG +L + IEE LK V L R D+P +
Sbjct: 653 MGVCPQHDLLWETLTGREHLLFYGRLKNLKGSDLNQAIEESLKSVNLSREGVADKPAGKY 712
Query: 136 SGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMKEEHEMTIFLTTHYM 195
SGGM+RRL +A +LI P+++++DEP+ GLDP +R +W I+ K+ I LTTH M
Sbjct: 713 SGGMKRRLSVAISLIGSPKVVYMDEPSTGLDPASRRSLWTAIKGAKK--HTAIILTTHSM 770
Query: 196 DEAEQLADRIAIIDHGKIIAEGTSEELKKLVGNDIIYLKLESPKEE--LKCLKADFIRGC 253
+EAE L DR+ I G++ G +ELK G + S + E ++ L D
Sbjct: 771 EEAEFLCDRLGIFVDGRLQCVGNPKELKARYGGSYVLTMTTSSEHEKDVEMLIQDVSPNA 830
Query: 254 KLLPD--GRVRIDVENATEALPKLFELAQ--KNNVKILEVTYHRPTLNDVFL 301
K + G + ++ + +LF+ + K N ++ TL DVF+
Sbjct: 831 KKIYHIAGTQKFEIPKDEVRIAELFQAVEKAKGNFRVFAWGLADTTLEDVFI 882
>gb|AAF99566.1| (AF167161) unknown [Staphylococcus aureus]
Length = 309
Score = 172 bits (432), Expect = 4e-42
Identities = 109/304 (35%), Positives = 169/304 (54%), Gaps = 9/304 (2%)
Query: 4 IEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAIVA 63
IE+ NL K+YG AV +S V+ G+I+ FLG NGAGKTTT+ +L L+KPT G +
Sbjct: 8 IEINNLTKQYGSQIAVNNLSITVESGQIYGFLGRNGAGKTTTIRMLLGLIKPTKGNIKIF 67
Query: 64 GHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKFVE 123
+ E+ K IG + + P LTA EN+ I+ I G+ + + IEE+L+ V
Sbjct: 68 EKEFESNKTEILKNIGAMVETPGFYSNLTAKENLTINAKILGI---QKENAIEEVLEIVG 124
Query: 124 LWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMKEE 183
L K + K +S GM++RL IARAL+H PE+L LDEPT GLDP I + I+ + +
Sbjct: 125 LASEKVKLFKNYSLGMKQRLGIARALLHNPELLILDEPTNGLDPIGIKEIRKLIKDLAQS 184
Query: 184 HEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVGNDIIYLKLESPKEELK 243
+TI +++H + E EQL D++ II +G ++ E E+LKK I + + S +E++
Sbjct: 185 RNITILISSHILSEIEQLVDKVGIIHNGVLLEEIMYEDLKK-KNRQFISISV-SDEEKVA 242
Query: 244 C-LKADF-IRGCKLLPDGRVRIDVENATEALPKLFELAQKNNVKILEVTYHRPTLNDVFL 301
C L+ +F I K+ +G +I + + ++ L NN+ + ++ L F
Sbjct: 243 CLLETNFGIYDYKIKENGEFKI--YSHIDRQQEINRLLVLNNIDVFQMRVIEDYLETYFE 300
Query: 302 HLTG 305
L G
Sbjct: 301 DLVG 304
>pir||T07713 probable ABC-type transport protein T23J7.70 - Arabidopsis thaliana
>gi|4741191|emb|CAB41857.1| (AL049746) ABC
transporter-like protein [Arabidopsis thaliana]
Length = 925
Score = 171 bits (430), Expect = 8e-42
Identities = 102/292 (34%), Positives = 161/292 (54%), Gaps = 10/292 (3%)
Query: 18 AVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAIVAGHDVVKEPQEVRKK 77
AV+ +S V GE F LGPNGAGKT+ ++++T L+KPTSG A V G D+ K+ V
Sbjct: 623 AVRVLSLAVPSGECFGMLGPNGAGKTSFINMMTGLVKPTSGAAFVQGLDICKDMDRVYTS 682
Query: 78 IGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKFVELWR--FKDRPVKYF 135
+G+ Q L LT E++ +G + LKG +L + +EE L+ V L+ D+P +
Sbjct: 683 MGVCPQHDLLWETLTGREHLLFYGRLKNLKGVDLNQAVEESLRSVNLFHGGVADKPAGKY 742
Query: 136 SGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMKEEHEMTIFLTTHYM 195
SGGM+RRL +A +LI P+++++DEP+ GLDP +R ++W I+ K I LTTH M
Sbjct: 743 SGGMKRRLSVAISLIGNPKVVYMDEPSTGLDPASRKNLWTVIKNAK--RHTAIILTTHSM 800
Query: 196 DEAEQLADRIAIIDHGKIIAEGTSEELKKLVGNDIIYLKLESPKEE--LKCLKADFIRGC 253
+EAE L DR+ I G++ G +ELK G + S + E ++ L +
Sbjct: 801 EEAEFLCDRLGIFVDGRLQCIGNPKELKGRYGGSYVLTMTTSSEHEKDVEMLVQEVSPNV 860
Query: 254 KLLPD--GRVRIDVENATEALPKLFELAQ--KNNVKILEVTYHRPTLNDVFL 301
K + G + ++ + ++F++ + K+N K+ TL DVF+
Sbjct: 861 KKIYHIAGTQKFEIPKDEVRISEVFQVVEKAKSNFKVFAWGLADTTLEDVFI 912
>dbj|BAB04164.1| (AP001508) ABC transporter (ATP-binding protein) [Bacillus
halodurans]
Length = 306
Score = 171 bits (429), Expect = 1e-41
Identities = 103/303 (33%), Positives = 166/303 (53%), Gaps = 8/303 (2%)
Query: 2 YAIEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAI 61
Y IE NL Y AV I+ KVK+GEI+ FLGPNGAGKTTT+ +L L+K + G
Sbjct: 6 YLIETNNLTMTYKHVHAVDRINLKVKEGEIYGFLGPNGAGKTTTIRMLLGLIKASHGSIK 65
Query: 62 VAGHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKF 121
+ G D+ + ++ K IG + + PS L+ +N+ I + K +I E+L+
Sbjct: 66 IFGKDLKQHRLDILKNIGALVESPSYYPHLSGEDNLETVRKIVKVP----KSRIAEVLEL 121
Query: 122 VELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMK 181
V L + DR V+ +S GM++RL IA AL+ P ++ LDEPT GLDP I I +
Sbjct: 122 VRLTKVADRKVQEYSLGMKQRLAIAAALLANPRLVILDEPTNGLDPAGIIEIRNLILRLP 181
Query: 182 EEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVGNDIIYLKLESPKEE 241
+E+ +T+ L++H + E EQ+A ++ II GK+I + + EEL+K N I+L P+
Sbjct: 182 KEYGITVLLSSHLLSEVEQVASQVGIIAKGKLIFQDSIEELRK-KANRKIFLSTSHPEVA 240
Query: 242 LKCLKADFIRGCKLLPDGRVRIDVENATEALPKLFELAQKNNVKILEVTYHRPTLNDVFL 301
L+ RG + R + + + E + +L + + ++ + ++ +L ++FL
Sbjct: 241 ATILQE---RGINVDTQARGLVMNDRSDEEIAQLVKAFVEKDIDVYRISDETSSLEEIFL 297
Query: 302 HLT 304
LT
Sbjct: 298 QLT 300
>pir||H75077 abc transporter, ATP-binding protein PAB1696 - Pyrococcus abyssi
(strain Orsay) >gi|5458437|emb|CAB49925.1| (AJ248286)
ABC transporter, ATP-binding protein [Pyrococcus abyssi]
Length = 253
Score = 170 bits (427), Expect = 2e-41
Identities = 92/242 (38%), Positives = 151/242 (62%), Gaps = 4/242 (1%)
Query: 4 IEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAIVA 63
I VENL K++G +KGISF VK GEI+ LGPNG+GK+TT+ +L+ ++ GK IV
Sbjct: 2 IIVENLRKRFGGKEVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVIVG 61
Query: 64 GHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKFVE 123
G +V K+P +V++ +G V + P+L LT E G + G+ L+E++ +L++ E
Sbjct: 62 GVEVAKDPLQVKRIVGYVPETPALYESLTPAEFFSFVGGVRGIPKDILEERVRKLVEAFE 121
Query: 124 LWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMKEE 183
+ ++ ++ + S G ++++ + +L+H+P++L LDE GLDP++ E + KEE
Sbjct: 122 IKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSARIFRELLYEFKEE 181
Query: 184 HEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVGN---DIIYLKLESPKE 240
+ +F +TH + AE + DR+ II G+IIAEGT EELK++ + ++LKL KE
Sbjct: 182 GKSIVF-STHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKEERLEDVFLKLTQAKE 240
Query: 241 EL 242
E+
Sbjct: 241 EI 242
>dbj|BAB10074.1| (AB010069) contains similarity to ABC transporter~gene_id:MAC9.5
[Arabidopsis thaliana]
Length = 907
Score = 170 bits (427), Expect = 2e-41
Identities = 98/250 (39%), Positives = 143/250 (57%), Gaps = 10/250 (4%)
Query: 2 YAIEVENLVKKYGDFT------AVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKP 55
+AI +NL K Y AV+G+ V GE F LGPNGAGKT+ ++++T LLKP
Sbjct: 583 HAIVCDNLKKVYPGSDGNPPKLAVRGLYLDVPSGECFGMLGPNGAGKTSFINMMTGLLKP 642
Query: 56 TSGKAIVAGHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKI 115
TSG A+V G D+ K+ +V +G+ Q L LT E++ +G + +KG L + +
Sbjct: 643 TSGTALVQGLDICKDMNKVYTSMGVCPQHDLLWGTLTGREHLLFYGRLKNIKGSALMQAV 702
Query: 116 EELLKFVELW--RFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHI 173
EE LK V L+ D+P +SGGM+RRL +A +LI P+++++DEP+ GLDP +R +
Sbjct: 703 EESLKSVSLFDGGVADKPAGKYSGGMKRRLSVAISLIGNPKVVYMDEPSTGLDPASRKDL 762
Query: 174 WEYIRTMKEEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVGNDIIYL 233
W I+ K+ I LTTH M+EAE L DR+ I G + G +ELK G ++
Sbjct: 763 WTVIQRAKQ--NTAIILTTHSMEEAEFLCDRLGIFVDGGLQCVGNPKELKGRYGGSYVFT 820
Query: 234 KLESPKEELK 243
S + E K
Sbjct: 821 MTTSVEHEEK 830
>gb|AAG20956.1| (AE005162) daunorubicin resistance ABC transporter ATP-binding
protein; Trp6 [Halobacterium sp. NRC-1]
Length = 263
Score = 170 bits (426), Expect = 2e-41
Identities = 89/221 (40%), Positives = 137/221 (61%), Gaps = 2/221 (0%)
Query: 3 AIEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAIV 62
AI ++L K+YGD TAV G + ++ G ++ FLGPNGAGKTTT+ +LT L +PTSG V
Sbjct: 6 AITTDDLTKEYGDTTAVSGFTLAIEAGHVYGFLGPNGAGKTTTIRMLTALTEPTSGAGHV 65
Query: 63 AGHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKFV 122
AGH + Q + IG + + P + ELTA E + HG + + E++++IEELL
Sbjct: 66 AGHPITNR-QAIIPHIGYLPELPPIYDELTAREQLEYHGGLRDMDPVEIEDRIEELLDRF 124
Query: 123 ELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMKE 182
+L D + +S GM+++ + +AL+HEP+++ LDEPT GLDP+ + + I T
Sbjct: 125 DLTGDADDRISTYSKGMKQKTGLVQALMHEPDVVILDEPTSGLDPRAARTVRDTI-TELA 183
Query: 183 EHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELK 223
+ T+FL+TH + +LA + I+ G+++AEG EELK
Sbjct: 184 AGDRTVFLSTHILPVVAELATEVGILYDGELVAEGAPEELK 224
>gb|AAF49312.2| (AE003523) CG6052 gene product [Drosophila melanogaster]
Length = 1660
Score = 170 bits (426), Expect = 2e-41
Identities = 105/295 (35%), Positives = 162/295 (54%), Gaps = 30/295 (10%)
Query: 4 IEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAIVA 63
I++ NL K YG AVKGIS K+ + EI LG NGAGKTTT++++T ++KPTSG AIV
Sbjct: 475 IQLFNLQKNYGKLKAVKGISLKMHRNEITVLLGHNGAGKTTTINMITGIVKPTSGTAIVN 534
Query: 64 GHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKFVE 123
G+D+ + R+ +GI Q+ L +E++ +++ + G++G + E E+ K++
Sbjct: 535 GYDIRTHLAKARESLGICPQNNILFKEMSVRDHIIFFSKLKGIRGTKAVE--NEVGKYMT 592
Query: 124 LWRFKDR---PVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTM 180
+ + +D+ K SGGM+R+L + AL +++ DEP+ G+D R +W+ +++
Sbjct: 593 MLKLQDKSYVAAKNLSGGMKRKLSLCCALCGNAKVVLCDEPSSGIDAAGRRSLWDLLQSE 652
Query: 181 KEEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVGNDIIYLKLESPKE 240
K+ TI LTTHYMDEA+ L DRIAI+ GK+ +GTS LKK G +
Sbjct: 653 KDGR--TILLTTHYMDEADVLGDRIAILSEGKLQCQGTSFYLKKRFGTGYL--------- 701
Query: 241 ELKCLKADFIRGCKLLPDGRVRIDVENATEALPKLFELAQKNNVKILEVTYHRPT 295
L C+ GC DV T+ + K + V E+TY PT
Sbjct: 702 -LVCIMQS---GC----------DVGAVTQLIRKYVPPIKPERVLGTELTYRLPT 742
Score = 129 bits (322), Expect = 3e-29
Identities = 89/274 (32%), Positives = 142/274 (51%), Gaps = 12/274 (4%)
Query: 6 VENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAIVAGH 65
V + K+Y AVK ISF V E F LG NGAGKT+T +L K TSG+A + G
Sbjct: 1298 VYKISKRYRSKLAVKAISFHVPHAECFGLLGINGAGKTSTFKMLAGDEKITSGEAYIDGT 1357
Query: 66 DVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKFVELW 125
++ +V +KIG Q +L +LT E + I+ ++ G++ R + L
Sbjct: 1358 NI--STHKVYRKIGYCPQFDALFEDLTGRETLNIYCLLRGVQRRHVTPICWGLAISFGFA 1415
Query: 126 RFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMKEEHE 185
+ D+ K++SGG +R+L A +++ P +L+LDEPT G+DP R +W+ I ++ +
Sbjct: 1416 KHMDKQTKHYSGGNRRKLSTAISVLGNPSVLYLDEPTSGMDPAARRQLWQIIGLIRTAGK 1475
Query: 186 MTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVGNDIIYLKLESPKEELKCL 245
+I LT+H MDE E L R+AI+ G+ G+ + LK +I K ++K
Sbjct: 1476 -SIVLTSHSMDECEALCSRLAIMVDGEFKCLGSVQSLKNQFSKGLIL------KVKVKHK 1528
Query: 246 KADFIRGCKLLPDGRVRIDVENATEALPKLFELA 279
K F R ++ D D ++ +E K ++A
Sbjct: 1529 KKTFQR---VVEDSSSSNDKKSISETDLKFLQMA 1559
>pir||JN0849 hypothetical 35K protein - Streptomyces lividans
>gi|47168|emb|CAA46525.1| (X65556) open reading frame
[Streptomyces lividans] >gi|5918477|emb|CAB56355.1|
(AL118514) ABC transport protein, ATP-binding subunit
[Streptomyces coelicolor A3(2)]
Length = 326
Score = 169 bits (424), Expect = 4e-41
Identities = 96/223 (43%), Positives = 134/223 (60%), Gaps = 9/223 (4%)
Query: 2 YAIEVENLVKKYGD-FTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKA 60
+ IEV +L + YG F AV+GI F V++GE+FA LG NGAGKT+TV +L L P G+
Sbjct: 8 HVIEVTDLRRVYGGGFEAVRGIDFSVRRGEVFALLGTNGAGKTSTVELLEGLAAPAGGRV 67
Query: 61 IVAGHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYI-HGMIYGLKGRELKEKIEELL 119
V GHD E VR + G++ Q+ ELT E + G + G + E+L
Sbjct: 68 RVLGHDPYTERAAVRPRTGVMLQEGGFPSELTVAETARMWAGCVSGAR------PPAEVL 121
Query: 120 KFVELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRT 179
V L VK SGG +RRL++A AL+ +PE+LFLDEP+ GLD + R WE +
Sbjct: 122 ALVGLEAKSGTRVKQLSGGQRRRLDLALALLGDPEVLFLDEPSTGLDAEGRRDTWELVGA 181
Query: 180 MKEEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEEL 222
++++ T+ LTTHY++EAE LADR+AI+ G+I A GT E+
Sbjct: 182 LRDQ-GTTVLLTTHYLEEAEHLADRLAIMHDGRIAATGTPAEV 223
>dbj|BAB07612.1| (AP001520) ABC transporter (ATP-binding protein) [Bacillus
halodurans]
Length = 282
Score = 168 bits (422), Expect = 7e-41
Identities = 104/308 (33%), Positives = 172/308 (55%), Gaps = 30/308 (9%)
Query: 2 YAIEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAI 61
+ IEV++L K + A+K +SF +K+GE F FLGP+GAGKTTT+ +LT ++ G+
Sbjct: 3 HVIEVKHLRKTFDGKEALKDVSFSIKRGETFGFLGPSGAGKTTTIKILTGQVRSFDGEVA 62
Query: 62 VAGHDVVK-EPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLK 120
+ G V + + + +IG++ + L LT +N+ ++ +Y + R +I ++L
Sbjct: 63 LFGKPVHRLKRKTFMSQIGVLTDNSGLYERLTVQDNLSMYCKLYSVPER----RIHDVLA 118
Query: 121 FVELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTM 180
V L + + V S GM++R+ +ARA++H+P++LFLDEPT LDP + I + +R +
Sbjct: 119 EVGLRDERAKIVSKLSKGMKQRVILARAMLHKPDLLFLDEPTSALDPASSHMIHDSLRRL 178
Query: 181 KEEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVGNDIIYLKLESPKE 240
E TIFLTTH M EAE++ DR+A +D GKI T E+L+ + I L L+ +
Sbjct: 179 NRE-GTTIFLTTHDMLEAEKICDRVAFLDQGKIRVMDTPEQLRLTYADSTITLLLKGGRR 237
Query: 241 ELKCLKADFIRGCKLLPDGRVRIDVENATEALPKLFELAQKNNVKILEVTYHRPTLNDVF 300
E+ VEN + + ++ + N ++L + + PTL DVF
Sbjct: 238 EI----------------------VENNLDGANTISQVMK--NGELLSIHSNEPTLGDVF 273
Query: 301 LHLTGREI 308
L +TG+E+
Sbjct: 274 LRVTGKEL 281
>pir||A75184 ATP-binding transport protein PAB0434 - Pyrococcus abyssi (strain
Orsay) >gi|5458062|emb|CAB49552.1| (AJ248284)
ATP-BINDING TRANSPORT PROTEIN [Pyrococcus abyssi]
Length = 244
Score = 168 bits (420), Expect = 1e-40
Identities = 93/224 (41%), Positives = 139/224 (61%), Gaps = 5/224 (2%)
Query: 3 AIEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAIV 62
A+ V NL K YG A++G+SF++++GEIF +GPNGAGK+TT+ +L TLL PT G+A V
Sbjct: 6 AVAVSNLEKDYGKVKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILATLLHPTGGRAEV 65
Query: 63 AGHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKFV 122
GHDVVKE EVRK I + ++ + LT E + +Y R+ ++ ++ ++
Sbjct: 66 FGHDVVKEASEVRKLISYLPEEAGAYKRLTGLEYLEFMAKLYAKDSRKAEKMLKLGIELS 125
Query: 123 ELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMKE 182
L + V +S GM RRL +ARAL+ +P++ LDEPT GLD + +E RT+KE
Sbjct: 126 GLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIM---NAFEIRRTIKE 182
Query: 183 --EHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKK 224
+ +T +++H M E E L DR+A+I G+I+ GT ELK+
Sbjct: 183 FSKEGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKE 226
>pir||G82993 probable ATP-binding/permease fusion ABC transporter PA5231
[imported] - Pseudomonas aeruginosa (strain PAO1)
>gi|9951539|gb|AAG08616.1|AE004935_13 (AE004935)
probable ATP-binding/permease fusion ABC transporter
[Pseudomonas aeruginosa]
Length = 916
Score = 168 bits (420), Expect = 1e-40
Identities = 87/225 (38%), Positives = 137/225 (60%), Gaps = 1/225 (0%)
Query: 3 AIEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAIV 62
AIE E L ++GDF AV +SF++++GEIF FLG NG GK+TT+ +LT LL + G +
Sbjct: 274 AIEAEGLTCRFGDFVAVDHVSFRIERGEIFGFLGSNGCGKSTTMKMLTGLLPASEGTCAL 333
Query: 63 AGHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKFV 122
G V R+++G + Q SL EL+ +N+ +H ++ L + ++ E+L+
Sbjct: 334 FGQPVDASDMATRRRVGYMSQAFSLYAELSVRQNLVLHARLFHLPADGIPARVGEMLRRF 393
Query: 123 ELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMKE 182
+L + D G+++RL +A A+IH+PEIL LDEPT G+DP R WE + +
Sbjct: 394 DLEKVADELPNDLPLGIRQRLSLAVAVIHKPEILILDEPTSGVDPVARDGFWELMVELSR 453
Query: 183 EHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVG 227
+TIF++TH+M+EA Q DRI+++ GK++A T +EL + G
Sbjct: 454 RDGVTIFISTHFMNEA-QRCDRISLMHAGKVLASDTPDELVRQRG 497
Score = 125 bits (311), Expect = 7e-28
Identities = 71/221 (32%), Positives = 120/221 (54%), Gaps = 6/221 (2%)
Query: 12 KYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAIVAGHDVVKEP 71
+YG+ AV +S ++ + +GP+G GK++ + +L K G+ V D+
Sbjct: 17 RYGETRAVDDVSLEIPANRMVGLIGPDGVGKSSLLALLAGARKMQDGEIRVLDGDMRDRR 76
Query: 72 QEVRKKIGIVFQDPSLDREL----TAYENMYIHGMIYGLKGRELKEKIEELLKFVELWRF 127
I + L + L + +EN+ G ++G E + +I +LL+ L F
Sbjct: 77 HRRAVCPRIAYMPQGLGKNLYPTLSVFENVDFFGRLFGHDKAERERRIADLLQSTGLAPF 136
Query: 128 KDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMKEEHE-M 186
+RP SGGM+++L + ALIH+P++L LDEPT G+DP +R WE I ++ E M
Sbjct: 137 AERPAGKLSGGMKQKLGLCCALIHDPDLLILDEPTTGVDPLSRNQFWELIGRIRAGREGM 196
Query: 187 TIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVG 227
++ + T YM+EAE+ D + +D GK++A GT +EL++ G
Sbjct: 197 SVLVATAYMEEAERF-DWLVAMDDGKVLATGTPQELRERTG 236
>pir||S47705 hypothetical protein f648 - Escherichia coli
>gi|912462|gb|AAB18461.1| (U00039) No definition line
found [Escherichia coli]
Length = 648
Score = 166 bits (416), Expect = 3e-40
Identities = 83/220 (37%), Positives = 141/220 (63%), Gaps = 1/220 (0%)
Query: 3 AIEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAIV 62
AIE +L ++G F AV ++F++ +GEIF FLG NG GK+TT+ +LT LL + G+A +
Sbjct: 13 AIEARDLTMRFGSFVAVDHVNFRIPRGEIFGFLGSNGCGKSTTMKMLTGLLPASEGEAWL 72
Query: 63 AGHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKFV 122
G V + + R+++G + Q SL ELT +N+ +H ++ + E+ ++ E+ +
Sbjct: 73 FGQPVDPKDIDTRRRVGYMSQAFSLYNELTVRQNLELHARLFHIPEAEIPARVAEMSERF 132
Query: 123 ELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMKE 182
+L +D + G+++RL +A A+IH PE+L LDEPT G+DP R W+ + +
Sbjct: 133 KLNDVEDILPESLPLGIRQRLSLAVAVIHRPEMLILDEPTSGVDPVARDMFWQLMVDLSR 192
Query: 183 EHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEEL 222
+ ++TIF++TH+M+EAE+ DRI+++ GK++A GT +EL
Sbjct: 193 QDKVTIFISTHFMNEAER-CDRISLMHAGKVLASGTPQEL 231
>sp|P37624|YHIH_ECOLI HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PROTEIN YHIH
>gi|7430321|pir||A65146 probable ABC transporter yhiH -
Escherichia coli >gi|2367231|gb|AAC76511.1| (AE000424)
putative ATP-binding component of a transport system,
fragment 1 [Escherichia coli K12]
Length = 894
Score = 166 bits (416), Expect = 3e-40
Identities = 83/220 (37%), Positives = 141/220 (63%), Gaps = 1/220 (0%)
Query: 3 AIEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAIV 62
AIE +L ++G F AV ++F++ +GEIF FLG NG GK+TT+ +LT LL + G+A +
Sbjct: 259 AIEARDLTMRFGSFVAVDHVNFRIPRGEIFGFLGSNGCGKSTTMKMLTGLLPASEGEAWL 318
Query: 63 AGHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKFV 122
G V + + R+++G + Q SL ELT +N+ +H ++ + E+ ++ E+ +
Sbjct: 319 FGQPVDPKDIDTRRRVGYMSQAFSLYNELTVRQNLELHARLFHIPEAEIPARVAEMSERF 378
Query: 123 ELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMKE 182
+L +D + G+++RL +A A+IH PE+L LDEPT G+DP R W+ + +
Sbjct: 379 KLNDVEDILPESLPLGIRQRLSLAVAVIHRPEMLILDEPTSGVDPVARDMFWQLMVDLSR 438
Query: 183 EHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEEL 222
+ ++TIF++TH+M+EAE+ DRI+++ GK++A GT +EL
Sbjct: 439 QDKVTIFISTHFMNEAER-CDRISLMHAGKVLASGTPQEL 477
Score = 122 bits (304), Expect = 4e-27
Identities = 70/217 (32%), Positives = 126/217 (57%), Gaps = 6/217 (2%)
Query: 13 YGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAIVAGHDV--VKE 70
YG A+ I+ + + +GP+G GK++ + +++ G +V G D+ K
Sbjct: 5 YGKTVALNNITLDIPARCMVGLIGPDGVGKSSLLSLISGARVIEQGNVMVLGGDMRDPKH 64
Query: 71 PQEVRKKIGIVFQD--PSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKFVELWRFK 128
++V +I + Q +L L+ YEN+ ++G E + +I ELL L F+
Sbjct: 65 RRDVCPRIAWMPQGLGKNLYHTLSVYENVDFFARLFGHDKAEREVRINELLTSTGLAPFR 124
Query: 129 DRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMKE-EHEMT 187
DRP SGGM+++L + ALIH+PE+L LDEPT G+DP +R+ W+ I ++++ + M+
Sbjct: 125 DRPAGKLSGGMKQKLGLCCALIHDPELLILDEPTTGVDPLSRSQFWDLIDSIRQRQSNMS 184
Query: 188 IFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKK 224
+ + T YM+EAE+ D + ++ G+++A G++EEL++
Sbjct: 185 VLVATAYMEEAERF-DWLVAMNAGEVLATGSAEELRQ 220
>pir||JC5348 cdd4 protein - Clostridium difficile >gi|1770140|emb|CAA63569.1|
(X92982) cdd4 [Clostridium difficile]
Length = 301
Score = 166 bits (415), Expect = 4e-40
Identities = 102/305 (33%), Positives = 169/305 (54%), Gaps = 11/305 (3%)
Query: 4 IEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAIVA 63
I + L K+Y VK I +V +G ++ FLGPNGAGK+TT+ +L L KPT G +
Sbjct: 5 IRTQRLSKEYNKIFRVKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINIL 64
Query: 64 GHDVVKEPQ-EVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKFV 122
G ++ ++ + + K IG + + PS LT ENM I + L K+ + E LK V
Sbjct: 65 GKELNEKNRISILKDIGSLIESPSYYGHLTGLENMTIMQRLLDLP----KKNVNEALKIV 120
Query: 123 ELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMKE 182
L K++ V +S GM++RL IA A++ P++L LDEPT GLDP I E I+++ E
Sbjct: 121 RLENQKNKKVSQYSLGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPE 180
Query: 183 EHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVGNDIIYLKLESPKEEL 242
++ MT+ +++H + E +Q+A I II+HG+++ + + +EL G I +K ++
Sbjct: 181 KYGMTVLISSHLLSEIDQIATSIGIINHGELVFQDSIKELHNR-GQSQIAIKTKNVVSAQ 239
Query: 243 KCLKADFIRGCKLLPDGRVRIDVENATEA-LPKLFELAQKNNVKILEVTYHRPTLNDVFL 301
K L L+ DG + +EN ++ + K+ + +N+ + + H+ +L D+FL
Sbjct: 240 KLLNTKGY--MSLIQDG--YLTIENLKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFL 295
Query: 302 HLTGR 306
L R
Sbjct: 296 ELLVR 300
>gi|5915658 ATP-binding cassette, sub-family A member 1; ATP-binding cassette 1;
high density lipoprotein deficiency, Tangier type, 1;
cholesterol efflux regulatory protein [Homo sapiens]
>gi|8927983|sp|O95477|ABC1_HUMAN ATP-BINDING CASSETTE,
SUB-FAMILY A, MEMBER 1 (ATP-BINDING CASSETTE TRANSPORTER
1) (ATP-BINDING CASSETTE 1) (ABC-1) (CHOLESTEROL EFFLUX
REGULATORY PROTEIN) >gi|4128033|emb|CAA10005.1|
(AJ012376) ATP-binding cassette transporter-1 (ABC-1)
[Homo sapiens] >gi|5734101|gb|AAD49849.1|AF165281_1
(AF165281) ATP cassette binding transporter 1 [Homo
sapiens]
Length = 2201
Score = 165 bits (414), Expect = 6e-40
Identities = 93/227 (40%), Positives = 136/227 (58%), Gaps = 5/227 (2%)
Query: 4 IEVENLVKKYGDF--TAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAI 61
+ ++NLVK Y D AV G++ +G+I +FLG NGAGKTTT+ +LT L PTSG A
Sbjct: 839 VSIQNLVKVYRDGMKVAVDGLALNFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSGTAY 898
Query: 62 VAGHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKF 121
+ G D+ E +R+ +G+ Q L LT E+++ + + GL + +K ++E++
Sbjct: 899 ILGKDIRSEMSTIRQNLGVCPQHNVLFDMLTVEEHIWFYARLKGLSEKHVKAEMEQMALD 958
Query: 122 VELWRFK-DRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTM 180
V L K SGGMQR+L +A A + +++ LDEPT G+DP +R IWE + +
Sbjct: 959 VGLPSSKLKSKTSQLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYSRRGIWELL--L 1016
Query: 181 KEEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVG 227
K TI L+TH+MDEA+ L DRIAII HGK+ G+S LK +G
Sbjct: 1017 KYRQGRTIILSTHHMDEADVLGDRIAIISHGKLCCVGSSLFLKNQLG 1063
Score = 118 bits (294), Expect = 7e-26
Identities = 86/319 (26%), Positives = 162/319 (49%), Gaps = 13/319 (4%)
Query: 4 IEVENLVKKYGDFT--AVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAI 61
+E++ L K Y AV I + GE F LG NGAGK++T +LT T G A
Sbjct: 1852 LEIKELTKIYRRKRKPAVDRICVGIPPGECFGLLGVNGAGKSSTFKMLTGDTTVTRGDAF 1911
Query: 62 VAGHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKF 121
+ + ++ EV + +G Q ++ LT E++ ++ G+ +E+ + E ++
Sbjct: 1912 LNRNSILSNIHEVHQNMGYCPQFDAITELLTGREHVEFFALLRGVPEKEVGKVGEWAIRK 1971
Query: 122 VELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMK 181
+ L ++ ++ +SGG +R+L A ALI P ++FLDEPT G+DP+ R +W ++
Sbjct: 1972 LGLVKYGEKYAGNYSGGNKRKLSTAMALIGGPPVVFLDEPTTGMDPKARRFLWNCALSVV 2031
Query: 182 EEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVGND-IIYLKLESPKE 240
+E ++ LT+H M+E E L R+AI+ +G+ G+ + LK G+ I +++
Sbjct: 2032 KEGR-SVVLTSHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTIVVRIAGSNP 2090
Query: 241 ELKCLKADFIRGC------KLLPDGRVRIDVENATEALPKLFEL--AQKNNVKILEVTYH 292
+LK ++ DF K ++ + ++ +L ++F + K + I + +
Sbjct: 2091 DLKPVQ-DFFGLAFPGSVPKEKHRNMLQYQLPSSLSSLARIFSILSQSKKRLHIEDYSVS 2149
Query: 293 RPTLNDVFLHLTGREIRDE 311
+ TL+ VF++ + D+
Sbjct: 2150 QTTLDQVFVNFAKDQSDDD 2168
>gb|AAF86276.1|AF275948_1 (AF275948) ABCA1 [Homo sapiens]
Length = 2261
Score = 165 bits (414), Expect = 6e-40
Identities = 93/227 (40%), Positives = 136/227 (58%), Gaps = 5/227 (2%)
Query: 4 IEVENLVKKYGDF--TAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAI 61
+ ++NLVK Y D AV G++ +G+I +FLG NGAGKTTT+ +LT L PTSG A
Sbjct: 899 VSIQNLVKVYRDGMKVAVDGLALNFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSGTAY 958
Query: 62 VAGHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKF 121
+ G D+ E +R+ +G+ Q L LT E+++ + + GL + +K ++E++
Sbjct: 959 ILGKDIRSEMSTIRQNLGVCPQHNVLFDMLTVEEHIWFYARLKGLSEKHVKAEMEQMALD 1018
Query: 122 VELWRFK-DRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTM 180
V L K SGGMQR+L +A A + +++ LDEPT G+DP +R IWE + +
Sbjct: 1019 VGLPSSKLKSKTSQLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYSRRGIWELL--L 1076
Query: 181 KEEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVG 227
K TI L+TH+MDEA+ L DRIAII HGK+ G+S LK +G
Sbjct: 1077 KYRQGRTIILSTHHMDEADVLGDRIAIISHGKLCCVGSSLFLKNQLG 1123
Score = 119 bits (296), Expect = 4e-26
Identities = 86/318 (27%), Positives = 162/318 (50%), Gaps = 11/318 (3%)
Query: 4 IEVENLVKKYGDFT--AVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAI 61
+E++ L K Y AV I + GE F LG NGAGK++T +LT T G A
Sbjct: 1912 LEIKELTKIYRRKRKPAVDRICVGIPPGECFGLLGVNGAGKSSTFKMLTGDTTVTRGDAF 1971
Query: 62 VAGHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKF 121
+ + ++ EV + +G Q ++ LT E++ ++ G+ +E+ + E ++
Sbjct: 1972 LNXNSILSNIHEVHQNMGYCPQFDAITELLTGREHVEFFALLRGVPEKEVGKVGEWAIRK 2031
Query: 122 VELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMK 181
+ L ++ ++ +SGG +R+L A ALI P ++FLDEPT G+DP+ R +W ++
Sbjct: 2032 LGLVKYGEKYAGNYSGGNKRKLSTAMALIGGPPVVFLDEPTTGMDPKARRFLWNCALSVV 2091
Query: 182 EEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVGND-IIYLKLESPKE 240
+E ++ LT+H M+E E L R+AI+ +G+ G+ + LK G+ I +++
Sbjct: 2092 KEGR-SVVLTSHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTIVVRIAGSNP 2150
Query: 241 ELKCLKADF---IRGCKLLPDGR--VRIDVENATEALPKLFEL--AQKNNVKILEVTYHR 293
+LK ++ F G R ++ + ++ +L ++F + K + I + + +
Sbjct: 2151 DLKPVQDFFGLAFPGSVXKEKHRNMLQYQLPSSLSSLARIFSILSQSKKRLHIEDYSVSQ 2210
Query: 294 PTLNDVFLHLTGREIRDE 311
TL+ VF++ + D+
Sbjct: 2211 TTLDQVFVNFAKDQSDDD 2228
>gb|AAF98175.1|AF285167_1 (AF285167) ATP-binding cassette transporter 1 [Homo sapiens]
Length = 2261
Score = 165 bits (414), Expect = 6e-40
Identities = 93/227 (40%), Positives = 136/227 (58%), Gaps = 5/227 (2%)
Query: 4 IEVENLVKKYGDF--TAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAI 61
+ ++NLVK Y D AV G++ +G+I +FLG NGAGKTTT+ +LT L PTSG A
Sbjct: 899 VSIQNLVKVYRDGMKVAVDGLALNFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSGTAY 958
Query: 62 VAGHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKF 121
+ G D+ E +R+ +G+ Q L LT E+++ + + GL + +K ++E++
Sbjct: 959 ILGKDIRSEMSTIRQNLGVCPQHNVLFDMLTVEEHIWFYARLKGLSEKHVKAEMEQMALD 1018
Query: 122 VELWRFK-DRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTM 180
V L K SGGMQR+L +A A + +++ LDEPT G+DP +R IWE + +
Sbjct: 1019 VGLPSSKLKSKTSQLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYSRRGIWELL--L 1076
Query: 181 KEEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVG 227
K TI L+TH+MDEA+ L DRIAII HGK+ G+S LK +G
Sbjct: 1077 KYRQGRTIILSTHHMDEADVLGDRIAIISHGKLCCVGSSLFLKNQLG 1123
Score = 121 bits (300), Expect = 1e-26
Identities = 87/318 (27%), Positives = 163/318 (50%), Gaps = 11/318 (3%)
Query: 4 IEVENLVKKYGDFT--AVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAI 61
+E++ L K Y AV I + GE F LG NGAGK++T +LT T G A
Sbjct: 1912 LEIKELTKIYRRKRKPAVDRICVGIPPGECFGLLGVNGAGKSSTFKMLTGDTTVTRGDAF 1971
Query: 62 VAGHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKF 121
+ + ++ EV + +G Q ++ LT E++ ++ G+ +E+ + E ++
Sbjct: 1972 LNKNSILSNIHEVHQNMGYCPQFDAITELLTGREHVEFFALLRGVPEKEVGKVGEWAIRK 2031
Query: 122 VELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMK 181
+ L ++ ++ +SGG +R+L A ALI P ++FLDEPT G+DP+ R +W ++
Sbjct: 2032 LGLVKYGEKYAGNYSGGNKRKLSTAMALIGGPPVVFLDEPTTGMDPKARRFLWNCALSVV 2091
Query: 182 EEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVGND-IIYLKLESPKE 240
+E ++ LT+H M+E E L R+AI+ +G+ G+ + LK G+ I +++
Sbjct: 2092 KEGR-SVVLTSHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTIVVRIAGSNP 2150
Query: 241 ELKCLKADF---IRGCKLLPDGR--VRIDVENATEALPKLFEL--AQKNNVKILEVTYHR 293
+LK ++ F G L R ++ + ++ +L ++F + K + I + + +
Sbjct: 2151 DLKPVQDFFGLAFPGSVLKEKHRNMLQYQLPSSLSSLARIFSILSQSKKRLHIEDYSVSQ 2210
Query: 294 PTLNDVFLHLTGREIRDE 311
TL+ VF++ + D+
Sbjct: 2211 TTLDQVFVNFAKDQSDDD 2228
>gi|11429275 ATP-binding cassette, sub-family A member 1 [Homo sapiens]
Length = 2231
Score = 165 bits (414), Expect = 6e-40
Identities = 93/227 (40%), Positives = 136/227 (58%), Gaps = 5/227 (2%)
Query: 4 IEVENLVKKYGDF--TAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAI 61
+ ++NLVK Y D AV G++ +G+I +FLG NGAGKTTT+ +LT L PTSG A
Sbjct: 869 VSIQNLVKVYRDGMKVAVDGLALNFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSGTAY 928
Query: 62 VAGHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKF 121
+ G D+ E +R+ +G+ Q L LT E+++ + + GL + +K ++E++
Sbjct: 929 ILGKDIRSEMSTIRQNLGVCPQHNVLFDMLTVEEHIWFYARLKGLSEKHVKAEMEQMALD 988
Query: 122 VELWRFK-DRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTM 180
V L K SGGMQR+L +A A + +++ LDEPT G+DP +R IWE + +
Sbjct: 989 VGLPSSKLKSKTSQLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYSRRGIWELL--L 1046
Query: 181 KEEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVG 227
K TI L+TH+MDEA+ L DRIAII HGK+ G+S LK +G
Sbjct: 1047 KYRQGRTIILSTHHMDEADVLGDRIAIISHGKLCCVGSSLFLKNQLG 1093
Score = 118 bits (294), Expect = 7e-26
Identities = 87/318 (27%), Positives = 162/318 (50%), Gaps = 11/318 (3%)
Query: 4 IEVENLVKKYGDFT--AVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAI 61
+E++ L K Y AV I + GE F LG NGAGK++T +LT T G A
Sbjct: 1882 LEIKELTKIYRRKRKPAVDRICVGIPPGECFGLLGVNGAGKSSTFKMLTGDTTVTRGDAF 1941
Query: 62 VAGHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKF 121
+ ++ EV + +G Q ++ LT E++ ++ G+ +E+ + E ++
Sbjct: 1942 LNICSILSNIHEVHQNMGYCPQFDAITELLTGREHVEFFALLRGVPEKEVGKVGEWAIRK 2001
Query: 122 VELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMK 181
+ L ++ ++ +SGG +R+L A ALI P ++FLDEPT G+DP+ R +W ++
Sbjct: 2002 LGLVKYGEKYAGNYSGGNKRKLSTAMALIGGPPVVFLDEPTTGMDPKARRFLWNCALSVV 2061
Query: 182 EEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVGND-IIYLKLESPKE 240
+E ++ LT+H M+E E L R+AI+ +G+ G+ + LK G+ I +++
Sbjct: 2062 KEGR-SVVLTSHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTIVVRIAGSNP 2120
Query: 241 ELKCLKADF---IRGCKLLPDGR--VRIDVENATEALPKLFEL--AQKNNVKILEVTYHR 293
+LK ++ F G L R ++ + ++ +L ++F + K + I + + +
Sbjct: 2121 DLKPVQDFFGLAFPGSVLKEKHRNMLQYQLPSSLSSLARIFSILSQSKKRLHIEDYSVSQ 2180
Query: 294 PTLNDVFLHLTGREIRDE 311
TL+ VF++ + D+
Sbjct: 2181 TTLDQVFVNFAKDQSDDD 2198
>gi|7304849 ATP-binding cassette 1, sub-family A, member 1 [Mus musculus]
>gi|728773|sp|P41233|ABC1_MOUSE ATP-BINDING CASSETTE,
SUB-FAMILY A, MEMBER 1 (ATP-BINDING CASSETTE TRANSPORTER
1) (ATP-BINDING CASSETTE 1) (ABC-1)
>gi|1082238|pir||A54774 ATP binding cassette transporter
ABC1 - mouse >gi|495257|emb|CAA53530.1| (X75926) abc1
[Mus musculus]
Length = 2201
Score = 165 bits (413), Expect = 7e-40
Identities = 93/227 (40%), Positives = 136/227 (58%), Gaps = 5/227 (2%)
Query: 4 IEVENLVKKYGDF--TAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAI 61
+ ++NLVK Y D AV G++ +G+I +FLG NGAGKTTT+ +LT L PTSG A
Sbjct: 839 VSIQNLVKVYRDGMKVAVDGLALNFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSGTAY 898
Query: 62 VAGHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKF 121
+ G D+ E +R+ +G+ Q L LT E+++ + + GL + +K ++E++
Sbjct: 899 ILGKDIRSEMSSIRQNLGVCPQHNVLFDMLTVEEHIWFYARLKGLSEKHVKAEMEQMALD 958
Query: 122 VELWRFK-DRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTM 180
V L K SGGMQR+L +A A + +++ LDEPT G+DP +R IWE + +
Sbjct: 959 VGLPPSKLKSKTSQLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYSRRGIWELL--L 1016
Query: 181 KEEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVG 227
K TI L+TH+MDEA+ L DRIAII HGK+ G+S LK +G
Sbjct: 1017 KYRQGRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKNQLG 1063
Score = 123 bits (307), Expect = 2e-27
Identities = 88/318 (27%), Positives = 163/318 (50%), Gaps = 11/318 (3%)
Query: 4 IEVENLVKKYGDFT--AVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAI 61
+E++ L K Y AV I + GE F LG NGAGK+TT +LT T G A
Sbjct: 1852 LEIKELTKIYRRKRKPAVDRICIGIPPGECFGLLGVNGAGKSTTFKMLTGDTPVTRGDAF 1911
Query: 62 VAGHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKF 121
+ + ++ EV + +G Q ++ LT E++ ++ G+ +E+ + E ++
Sbjct: 1912 LNKNSILSNIHEVHQNMGYCPQFDAITELLTGREHVEFFALLRGVPEKEVGKFGEWAIRK 1971
Query: 122 VELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMK 181
+ L ++ ++ +SGG +R+L A ALI P ++FLDEPT G+DP+ R +W ++
Sbjct: 1972 LGLVKYGEKYASNYSGGNKRKLSTAMALIGGPPVVFLDEPTTGMDPKARRFLWNCALSIV 2031
Query: 182 EEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVGND-IIYLKLESPKE 240
+E ++ LT+H M+E E L R+AI+ +G+ G+ + LK G+ I +++
Sbjct: 2032 KEGR-SVVLTSHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTIVVRIAGSNP 2090
Query: 241 ELKCLKADF---IRGCKLLPDGR--VRIDVENATEALPKLFEL--AQKNNVKILEVTYHR 293
+LK ++ F G L R ++ + ++ +L ++F + K + I + + +
Sbjct: 2091 DLKPVQEFFGLAFPGSVLKEKHRNMLQYQLPSSLSSLARIFSILSQSKKRLHIEDYSVSQ 2150
Query: 294 PTLNDVFLHLTGREIRDE 311
TL+ VF++ + D+
Sbjct: 2151 TTLDQVFVNFAKDQSDDD 2168
>emb|CAB93668.1| (AJ276653) RumF protein [Ruminococcus gnavus]
Length = 248
Score = 165 bits (413), Expect = 7e-40
Identities = 90/223 (40%), Positives = 133/223 (59%), Gaps = 4/223 (1%)
Query: 2 YAIEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAI 61
Y I E L KKY +FT+V +S +KKG I+ FLGPNGAGK+TT+ +L L PTSG
Sbjct: 3 YIITTEKLTKKYKNFTSVNKVSLHIKKGSIYGFLGPNGAGKSTTMKMLLGLTAPTSGSFQ 62
Query: 62 VAGHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKF 121
+ G + + K+IG + PS LT EN+ I I GL + +E+ L
Sbjct: 63 IDGKQFPNDRLTILKRIGSFIEAPSFYANLTGRENLDIIRRILGLP----QNAVEDALDL 118
Query: 122 VELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMK 181
V L +F DR K +S GM++RL +A AL+ P IL LDEPT GLDP I I+++
Sbjct: 119 VGLSQFGDRLAKKYSLGMKQRLGLAGALLGRPPILILDEPTNGLDPSGIHEIRNLIKSLP 178
Query: 182 EEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKK 224
++ T+ +++H + E E +AD I I++HG+++ EG+ ++LK+
Sbjct: 179 TFYDCTVLISSHMLSEIELIADDIGILNHGRMLFEGSLDDLKQ 221
>gb|AAG39073.1|AF287263_1 (AF287263) ATP-binding cassette 1, sub-family A, member 1 [Mus
musculus]
Length = 2198
Score = 165 bits (413), Expect = 7e-40
Identities = 93/227 (40%), Positives = 136/227 (58%), Gaps = 5/227 (2%)
Query: 4 IEVENLVKKYGDF--TAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAI 61
+ ++NLVK Y D AV G++ +G+I +FLG NGAGKTTT+ +LT L PTSG A
Sbjct: 839 VSIQNLVKVYRDGMKVAVDGLALNFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSGTAY 898
Query: 62 VAGHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKF 121
+ G D+ E +R+ +G+ Q L LT E+++ + + GL + +K ++E++
Sbjct: 899 ILGKDIRSEMSSIRQNLGVCPQHNVLFDMLTVEEHIWFYARLKGLSEKHVKAEMEQMALD 958
Query: 122 VELWRFK-DRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTM 180
V L K SGGMQR+L +A A + +++ LDEPT G+DP +R IWE + +
Sbjct: 959 VGLPPSKLKSKTSQLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYSRRGIWELL--L 1016
Query: 181 KEEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVG 227
K TI L+TH+MDEA+ L DRIAII HGK+ G+S LK +G
Sbjct: 1017 KYRQGRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKNQLG 1063
Score = 122 bits (302), Expect = 8e-27
Identities = 89/318 (27%), Positives = 163/318 (50%), Gaps = 12/318 (3%)
Query: 4 IEVENLVKKYGDFT--AVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAI 61
+E++ L K Y AV I + GE F LG NGAGK+TT +LT T G A
Sbjct: 1850 LEIKELTKIYRRKRKPAVDRICIGIPPGECFGLLGVNGAGKSTTFKMLTGDTPVTRGDAF 1909
Query: 62 VAGHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKF 121
+ + ++ EV + +G Q ++ LT E++ ++ G+ +E+ K E ++
Sbjct: 1910 LNKNSILSNIHEVHQNMGYCPQFDAITELLTGREHVEFFALLRGVPEKEVG-KGEWAIRK 1968
Query: 122 VELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMK 181
+ L ++ ++ +SGG +R+L A ALI P ++FLDEPT G+DP+ R +W ++
Sbjct: 1969 LGLVKYGEKYASNYSGGNKRKLSTAMALIGGPPVVFLDEPTTGMDPKARRFLWNCALSIV 2028
Query: 182 EEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVGND-IIYLKLESPKE 240
+E ++ LT+H M+E E L R+AI+ +G+ G+ + LK G+ I +++
Sbjct: 2029 KEGR-SVVLTSHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTIVVRIAGSNP 2087
Query: 241 ELKCLKADF---IRGCKLLPDGR--VRIDVENATEALPKLFEL--AQKNNVKILEVTYHR 293
+LK ++ F G L R ++ + ++ +L ++F + K + I + + +
Sbjct: 2088 DLKPVQEFFGLAFPGSVLKEKHRNMLQYQLPSSLSSLARIFSILSQSKKRLHIEDYSVSQ 2147
Query: 294 PTLNDVFLHLTGREIRDE 311
TL+ VF++ + D+
Sbjct: 2148 TTLDQVFVNFAKDQSDDD 2165
>gb|AAD32038.1|AF093787_6 (AF093787) ABC transporter homolog CylA [Streptococcus agalactiae]
Length = 309
Score = 164 bits (412), Expect = 1e-39
Identities = 94/293 (32%), Positives = 162/293 (55%), Gaps = 11/293 (3%)
Query: 4 IEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAIVA 63
I+++N+ KKYG F A++ I+ ++G+ + LGPNGAGKTT + L K TSG
Sbjct: 3 IKLKNIGKKYGSFEALRDINLIFEEGKFYGLLGPNGAGKTTLFNPLIQNFKQTSGDI--- 59
Query: 64 GHDVVKEPQEVR---KKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLK 120
+V +P ++ + IGIVFQ LD LT EN+ G +YGL +++ ++++L
Sbjct: 60 KWEVDGKPLSIKDFYRHIGIVFQSNRLDDNLTVEENLISRGALYGLSKSQVRNRLKDLQT 119
Query: 121 FVELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTM 180
++++ K + SGG +R+++IARAL+ +P +L LDEPT GLDPQ+R +W+ I +
Sbjct: 120 YLDITAIKKQKYGSLSGGQKRKVDIARALLPQPSLLLLDEPTTGLDPQSRRDLWDAIAQL 179
Query: 181 KEEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEEL--KKLVGNDIIYLKLESP 238
++ +MT+ L THY++E D + ++ G I G + + N + LK E
Sbjct: 180 NQQSQMTVVLITHYLEEM-SACDVLNVLIEGNIYYSGDIKSFIEQHSTTNLNVVLKPEKS 238
Query: 239 KEELKCLKADFIRGCKLLPDGRVRIDVENATEALPKLFELAQKNNVKILEVTY 291
++L ADF+ C++L + + + E + + + K+ ++ V Y
Sbjct: 239 LDQLSI--ADFVNKCQVLSEREIVFKDISVEEMMQVISDNQDKSIIETFNVEY 289
>emb|CAC11779.1| (AL445064) daunorubicin resistance protein related protein
[Thermoplasma acidophilum]
Length = 327
Score = 164 bits (410), Expect = 2e-39
Identities = 99/302 (32%), Positives = 171/302 (55%), Gaps = 20/302 (6%)
Query: 17 TAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAIVAGHDVVKEPQEVRK 76
TA++ +SF++ +F+ +G NGAGKTT V +L T L PTSGK + D+++EP +R+
Sbjct: 41 TALRSVSFEIPMHGVFSLIGRNGAGKTTLVRILATELMPTSGKVFIDDIDIIREPDSIRR 100
Query: 77 KIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKFVELWRFKDRPVKYFS 136
+I I+ Q+ LT + + + G++ E K + +E+L + L DR + S
Sbjct: 101 RIAIIPQEARAISWLTPMQTVTTFLLYRGIRYSEAKARAKEVLADLGLASVADRMNRMLS 160
Query: 137 GGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMKEEHEMTIFLTTHYMD 196
GG +R++ +A + + +ILF+DEPT GLDP +R+ +W+ + +K+ E IFLTTHY++
Sbjct: 161 GGQKRKVLVAALVASDADILFMDEPTTGLDPISRSELWDILSDLKK--EKFIFLTTHYLE 218
Query: 197 EAEQLADRIAIIDHGKIIAEGTSEELKKLVGN--DIIYLKLESPKEELKCLKADFIRGCK 254
EAE+L+DRI I+D G++ A GT +L+ +V I + E+ E++ G
Sbjct: 219 EAERLSDRIGILDQGEMKAIGTMSDLRSMVPKKYSISLVDKENGNIEIE------NNGSV 272
Query: 255 LLPDGRVRIDVENATEALPKLFELAQKNNVKILEVTYHRPTLNDVFLHLTGREIRDEEGG 314
+ R+ +D EN + + +L +N + + + +L D++ + +EI GG
Sbjct: 273 IKVGSRIFVD-ENEAYVIAR--DLINRN----IRFSINPVSLEDIYYSIAKKEI---AGG 322
Query: 315 ES 316
ES
Sbjct: 323 ES 324
>gb|AAK42768.1| ABC transporter, ATP binding protein [Sulfolobus solfataricus]
Length = 309
Score = 163 bits (409), Expect = 2e-39
Identities = 88/220 (40%), Positives = 137/220 (62%), Gaps = 3/220 (1%)
Query: 12 KYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAIVAGHDVVKEP 71
K + AV +SF++++ A +GPNGAGKTT + +L+TL+ P+SG A+V G+ + KE
Sbjct: 14 KNKEIKAVDDVSFEIERNSTGALVGPNGAGKTTIIKMLSTLIIPSSGDALVNGYSITKEE 73
Query: 72 QEVRKKIGIVFQDPSL-DRELTAYENMYIHGMIYGLKGRELKEKIEELLKFVELWRFKDR 130
++VR+ IG+V L LTA EN+ + L + +++ +E+L+ V L + +
Sbjct: 74 KKVRESIGLVTVSERLFYYRLTALENLIFFASLQNLSLSDARKRAKEVLEIVGLSEWGNI 133
Query: 131 PVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMKEEHEMTIFL 190
P FS GMQR+L +ARALI +P +L LDEPT+GLDP + + +R + + TI L
Sbjct: 134 PYMKFSTGMQRKLALARALITDPPVLLLDEPTLGLDPLSARMFRDLVRRI--GRDKTILL 191
Query: 191 TTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVGNDI 230
T+HYM + E+LA++I ++ GK IAEG + LK +G I
Sbjct: 192 TSHYMKDIEELAEKIILLKKGKAIAEGNKDNLKNYLGKVI 231
>pir||T18288 ABC transport protein - slime mold (Dictyostelium discoideum)
(fragment) >gi|1513298|gb|AAB06789.1| (U66526) AbcA
[Dictyostelium discoideum]
Length = 1336
Score = 163 bits (409), Expect = 2e-39
Identities = 92/253 (36%), Positives = 151/253 (59%), Gaps = 11/253 (4%)
Query: 18 AVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAIVAGHDVVKEPQEVRKK 77
AVK +S V+KG I FLG NG GK+TT+ +LT LL+PT+G A+V GH V+ VR+
Sbjct: 400 AVKYLSLSVEKGTILGFLGSNGCGKSTTIGMLTGLLEPTAGDALVYGHSVISNIAAVRRI 459
Query: 78 IGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKFVELWRFKDRPVKYFSG 137
+V Q L E+TA E++ + + G+ +E + +I+++L V L + + + +SG
Sbjct: 460 TSVVPQHDILWAEMTAREHLQLFSELKGIPAQERESQIQKVLDQVRLSKISNNLISTYSG 519
Query: 138 GMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMKEEHEMTIFLTTHYMDE 197
GM+RRL +A A I +P+I+F+DEPT G+DP ++ H+ + ++++K ++ I LT+H M E
Sbjct: 520 GMKRRLSVAIACIGDPKIIFMDEPTTGVDPSSKRHLIDLVKSIK--NDKVIILTSHDMHE 577
Query: 198 AEQLADRIAIIDHGKIIAEGTSEELKKLVGNDI-IYLKLESPKE-----ELKCLKADFIR 251
E LAD+I I++ G + G S +LK G + + +SP+ E L I
Sbjct: 578 VEILADKIVIMNEGVMACNGNSLQLKSKYGEGYSVNIVAKSPESIPAVVEFVTLS---IP 634
Query: 252 GCKLLPDGRVRID 264
GCK + ++++
Sbjct: 635 GCKFMKQSALQLN 647
>pir||E72364 ABC transporter, ATP-binding protein - Thermotoga maritima (strain
MSB8) >gi|4981058|gb|AAD35629.1|AE001729_9 (AE001729)
ABC transporter, ATP-binding protein [Thermotoga
maritima]
Length = 244
Score = 163 bits (408), Expect = 3e-39
Identities = 93/225 (41%), Positives = 138/225 (61%), Gaps = 3/225 (1%)
Query: 1 MYAIEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKA 60
M A+ V++L K+ G +KGISF++++GEIF +GPNGAGKTTT+ +++TL+KP+SG
Sbjct: 1 MGAVVVKDLRKRIGKKEILKGISFEIEEGEIFGLIGPNGAGKTTTLRIISTLIKPSSGIV 60
Query: 61 IVAGHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLK 120
V G +VV+EP EVRK I + ++ R + E + Y E++E +E +
Sbjct: 61 TVFGKNVVEEPHEVRKLISYLPEEAGAYRNMQGIEYLRFVAGFYASSSSEIEEMVERATE 120
Query: 121 FVELW-RFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRT 179
L + KDR V +S GM R+L IARAL+ P + LDEPT GLD + + ++
Sbjct: 121 IAGLGEKIKDR-VSTYSKGMVRKLLIARALMVNPRLAILDEPTSGLDVLNAREVRKILKQ 179
Query: 180 MKEEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKK 224
+E +TI +++H M E E L DRIA+I +G I+ GT EELK+
Sbjct: 180 ASQE-GLTILVSSHNMLEVEFLCDRIALIHNGTIVETGTVEELKE 223
>gb|AAG20087.1| (AE005088) ABC transport protein; Trp2 [Halobacterium sp. NRC-1]
Length = 249
Score = 162 bits (407), Expect = 4e-39
Identities = 86/222 (38%), Positives = 135/222 (60%), Gaps = 2/222 (0%)
Query: 3 AIEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAIV 62
AIE L K+YGD TA++ I V G ++ FLGPNGAGKTTT+ +LTTL++PTSG A V
Sbjct: 5 AIEARALTKRYGDTTAIERIDLAVPSGSVYGFLGPNGAGKTTTMRMLTTLVEPTSGTATV 64
Query: 63 AGHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKFV 122
AG +V + V IG + ++P L ELTA E + + + +++I +LL+
Sbjct: 65 AGVEVT-DRASVVPNIGYLPEEPPLHAELTAREQLRYIAGLRDIPDPRAEQRITDLLERF 123
Query: 123 ELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMKE 182
L DR + +S GM+++ I +A++H+P++LFLDEPT GLDP+ + + I +
Sbjct: 124 SLGDDADRRISTYSKGMKQKTGIIQAMLHDPDVLFLDEPTSGLDPRAARTVRDTIADL-T 182
Query: 183 EHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKK 224
+ T+FL+TH + + LAD + ++ G ++ EG + LK+
Sbjct: 183 AGDATVFLSTHILPVVDDLADTVGVLYDGSLVTEGPPDALKQ 224
>pir||H71066 probable ATP-binding transport protein - Pyrococcus horikoshii
>gi|3257647|dbj|BAA30330.1| (AP000005) 253aa long
hypothetical ATP-binding transport protein [Pyrococcus
horikoshii]
Length = 253
Score = 162 bits (406), Expect = 5e-39
Identities = 89/242 (36%), Positives = 148/242 (60%), Gaps = 4/242 (1%)
Query: 4 IEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAIVA 63
I VENL KK+G +KGI+F V GEI+ LGPNG+GK+TT+ +L+ ++ GK +VA
Sbjct: 2 IIVENLRKKFGSKEVLKGINFTVNDGEIYGLLGPNGSGKSTTMRILSGIITDFEGKVMVA 61
Query: 64 GHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKFVE 123
G DV ++P +V++ +G V + P+L LT E G + + L+E+++ L+
Sbjct: 62 GVDVSRDPMKVKEIVGYVPETPALYESLTPAEFFSFIGGVRRIPQDILEERVKRLVDAFG 121
Query: 124 LWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMKEE 183
+ ++ ++ + S G ++++ + AL+H+P++L LDE GLDP++ E + KEE
Sbjct: 122 IGKYMNQLIGTLSFGTKQKISLISALLHDPQVLILDEAMNGLDPKSARIFRELLFEFKEE 181
Query: 184 HEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVGN---DIIYLKLESPKE 240
+ +F +TH + AE + DRI II G+I+AEGT +EL+++ + I+LKL KE
Sbjct: 182 GKSIVF-STHILALAEVMCDRIGIIYEGRIVAEGTIDELREIAREEKLEDIFLKLTQAKE 240
Query: 241 EL 242
E+
Sbjct: 241 EV 242
>gb|AAG19009.1| (AE005000) daunorubicin resistance ABC transporter ATP-binding
protein; Trp3 [Halobacterium sp. NRC-1]
Length = 252
Score = 162 bits (406), Expect = 5e-39
Identities = 85/221 (38%), Positives = 133/221 (59%), Gaps = 2/221 (0%)
Query: 3 AIEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAIV 62
AI + L K+YGD AV + V G ++ FLGPNGAGKTTT+ +LT+L PT+G A V
Sbjct: 5 AIRADGLTKRYGDEAAVDDLDLAVPAGSVYGFLGPNGAGKTTTMRLLTSLTDPTAGTAEV 64
Query: 63 AGHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKFV 122
AG V + + +IG + DP + ELT +E + ++GL E +IE LL+
Sbjct: 65 AGVPVT-DRAALTPRIGYLPADPPVFDELTGWEQLRHVARLHGLDDGEADTRIESLLERF 123
Query: 123 ELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMKE 182
+L DR ++ +S GM +++ + A++H+P++LFLDEPT GLDP+ + + + +
Sbjct: 124 DLLADADRRIESYSTGMTKKVGVVAAMLHDPDVLFLDEPTSGLDPRAARTVRDTVADL-S 182
Query: 183 EHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELK 223
+ T+ L+TH + ++LAD I +ID G ++A+G E LK
Sbjct: 183 AGDATVLLSTHVLPVVDELADTIGVIDDGVLVADGDPENLK 223
>pir||T07716 probable ABC-type transport protein T23J7.100 - Arabidopsis
thaliana >gi|4741194|emb|CAB41860.1| (AL049746) ABC
transporter-like protein [Arabidopsis thaliana]
Length = 722
Score = 162 bits (405), Expect = 6e-39
Identities = 102/306 (33%), Positives = 161/306 (52%), Gaps = 24/306 (7%)
Query: 18 AVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTT--------------LLKPTSGKAIVA 63
AV G+S V GE F LGPNGAGKT+ +++++T L+KP+SG A V
Sbjct: 412 AVCGLSLAVPSGECFGMLGPNGAGKTSFINMVSTQRDIYTNLLCLMTGLVKPSSGSAFVQ 471
Query: 64 GHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKFVE 123
G D+ K+ +V +G+ Q L LT E++ +G + LKG +L + +EE LK V
Sbjct: 472 GLDICKDMDKVYISMGVCPQHDLLWETLTGKEHLLFYGRLKNLKGHDLNQAVEESLKSVN 531
Query: 124 LWR--FKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMK 181
L+ D P +SGGM+RRL +A +LI P+++++DEP+ GLDP +R ++W I+ K
Sbjct: 532 LFHGGVADIPAGKYSGGMKRRLSVAISLIGSPKVVYMDEPSTGLDPASRINLWTVIKRAK 591
Query: 182 EEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVGNDIIYLKLESPKEE 241
+ I LTTH M+EAE L DR+ I G++ G +ELK G + SP+ E
Sbjct: 592 K--HAAIILTTHSMEEAEFLCDRLGIFVDGRLQCIGNPKELKGRYGGSYVLTITTSPEHE 649
Query: 242 --LKCLKADFIRGCKLLPD--GRVRIDVENATEALPKLFELAQ--KNNVKILEVTYHRPT 295
++ L + + + G + + + ++F+ + K N + + T
Sbjct: 650 KDVETLVQEVSSNARKIYHIAGTQKFEFPKEEVRISEVFQAVENAKRNFTVFAWGFADTT 709
Query: 296 LNDVFL 301
L DVF+
Sbjct: 710 LEDVFI 715
>emb|CAB60255.1| (AJ250862) MrsF protein [Bacillus sp. HIL-Y85/54728]
Length = 303
Score = 161 bits (404), Expect = 8e-39
Identities = 96/312 (30%), Positives = 171/312 (54%), Gaps = 25/312 (8%)
Query: 4 IEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAIVA 63
+ +L KKY T+V G++ ++++GEI+ FLGPNGAGKTTT+ +L L+KPT G +
Sbjct: 6 VVTHDLTKKYKKHTSVDGLNLRIRRGEIYGFLGPNGAGKTTTIRMLLGLIKPTKGNIEIF 65
Query: 64 GHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKFVE 123
G ++ K ++ ++IG + + P+ LT YEN+ + GL ++++ E+L+ V
Sbjct: 66 GQNLNKNRLQILQRIGSLVESPTYYGNLTGYENLEAVRRLRGLP----EQQVNEVLETVR 121
Query: 124 LWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMKEE 183
L + +R K +S GM++RL IA AL+ P++L LDEPT GLDP I E I+ + +
Sbjct: 122 LSKVANRLTKEYSLGMKQRLGIAVALLSSPDLLILDEPTNGLDPSGIQEIRELIKELPKS 181
Query: 184 HEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVGNDIIYLKLESPKEELK 243
M++ +++H + E +Q+A ++ II++GK+I + + L + K LK
Sbjct: 182 -GMSVIVSSHLLSEIDQMATQVGIINNGKMIFQDSIASLH------------QKRKPLLK 228
Query: 244 CLKADFIRGCKLLPDGRVRIDV--------ENATEALPKLFELAQKNNVKILEVTYHRPT 295
+D I +L +++D+ + E + ++ + + + + + +
Sbjct: 229 VGVSDVIEAKTILNRKGLKVDLQKNYLWLSQTEPEFVSEINSILLHSGLSVFRLEEKTRS 288
Query: 296 LNDVFLHLTGRE 307
L D+FL LTG E
Sbjct: 289 LEDIFLELTGTE 300
>emb|CAC00243.1| (AL160371) possible ABC transporter [Leishmania major]
Length = 1231
Score = 161 bits (402), Expect = 1e-38
Identities = 103/317 (32%), Positives = 162/317 (50%), Gaps = 26/317 (8%)
Query: 16 FTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAIVAGHDVVKEPQEVR 75
F AV +S+ + +GEI LGPNGAGK+TT++++T +L SG + GH + + E R
Sbjct: 830 FAAVDNVSWNMYRGEIAVLLGPNGAGKSTTINMITGMLAADSGDCFIEGHSITQNVAEAR 889
Query: 76 KKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKFVELWRFKDRPVKYF 135
+IG Q L +LT E++ +G I GL+G EL++ + ++L+ V+L D
Sbjct: 890 HEIGYCPQHNILWPDLTCREHLEFYGKIKGLRGAELEDAVVDILRAVDLEEKVDAIPAQM 949
Query: 136 SGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMKEEHEMTIFLTTHYM 195
SGG +R+L +A A + ++ LDEPT G+D R H W +R M + H TI LTTH M
Sbjct: 950 SGGQKRKLSVAIAFVGRNRVVLLDEPTAGMDAAARRHTWSLLRAMAQHH--TIMLTTHSM 1007
Query: 196 DEAEQLADRIAIIDHGKIIAEGTSEELKKLV------------------GNDIIYLKLES 237
DEA+ L D IAI+ G + G++ L++ G+ K+ +
Sbjct: 1008 DEADLLGDNIAIVTEGVLQCAGSTAFLRQYAGVGYTLRFDLTPVPTQEDGDAARQAKVAA 1067
Query: 238 PKEELKCLKADFIRGCKLL--PDGRVRIDVENATEA-LPK-LFELAQKNN--VKILEVTY 291
EL L + L+ D V ++ T+A LP+ L ++ + N ++I
Sbjct: 1068 VWAELHQLVMSHLPDSMLVLQTDAEVEYELRLGTDARLPEFLKDMESRGNRQLRIRGYAL 1127
Query: 292 HRPTLNDVFLHLTGREI 308
PTL DVF+ + +I
Sbjct: 1128 RAPTLEDVFMRVVEHQI 1144
>gb|AAK43268.1| ABC transporter, ATP binding protein related protein [Sulfolobus
solfataricus]
Length = 275
Score = 160 bits (401), Expect = 2e-38
Identities = 90/228 (39%), Positives = 135/228 (58%), Gaps = 6/228 (2%)
Query: 4 IEVENLVKKYGDFT-AVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAIV 62
+E NL K Y D T A+ ++F + LG NGAGKTT +L+T L PTSG A V
Sbjct: 2 LETINLTKIYRDGTVALDNLTFSANT-RVVTLLGRNGAGKTTLTRILSTQLLPTSGIARV 60
Query: 63 AGHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKFV 122
G+DVVK+ ++VRK I + Q+ + E++ ++ GL +E E LK V
Sbjct: 61 EGYDVVKDARKVRKIIASIPQEAKSIGIASPMEHLIMYLTARGLSFKEATEISRSALKEV 120
Query: 123 ELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMKE 182
LW +D+P SGGM+R++ +A AL E++ LDEPT GLDP +R +W ++++K
Sbjct: 121 GLWEVRDKPSDELSGGMKRKIFVAMALASNAELVLLDEPTTGLDPYSRLEVWSVLKSIKS 180
Query: 183 EHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVGNDI 230
+ I LTTHYM+EAE+L+D + ++ GK+IA+G+ +EL N +
Sbjct: 181 K----ILLTTHYMEEAEELSDEVILLHKGKLIAKGSIKELLTKFDNKV 224
>pir||A70082 ABC transporter (ATP-binding protein) homolog yxlF - Bacillus
subtilis >gi|1783260|dbj|BAA11737.1| (D83026) homologous
to many ATP-binding transport proteins; hypothetical
[Bacillus subtilis] >gi|2636401|emb|CAB15892.1| (Z99123)
similar to ABC transporter (ATP-binding protein)
[Bacillus subtilis]
Length = 295
Score = 160 bits (400), Expect = 2e-38
Identities = 90/237 (37%), Positives = 141/237 (58%), Gaps = 7/237 (2%)
Query: 4 IEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAIVA 63
+ +E+L K Y AVK +SF V + E A LGPNGAGKTTT+ +L LL PTSG +
Sbjct: 2 LSIESLCKSYRHHEAVKNVSFHVNENECVALLGPNGAGKTTTLQMLAGLLSPTSGTIKLL 61
Query: 64 GHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKFVE 123
G E + R+ IG + Q P+ +TA E + G + GL R+ +EKI E+L+FV
Sbjct: 62 G-----EKKLDRRLIGYLPQYPAFYSWMTANEFLTFAGRLSGLSKRKCQEKIGEMLEFVG 116
Query: 124 LWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMKEE 183
L + + +SGGM++RL +A+AL+H+P+ L LDEP LDP R + + +R +K+
Sbjct: 117 LHEAAHKRIGGYSGGMKQRLGLAQALLHKPKFLILDEPVSALDPTGRFEVLDMMRELKK- 175
Query: 184 HEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVGNDIIYLKLESPKE 240
M + +TH + +AEQ+ D++ I+ +G+I +G +ELK+ ++ L ++ E
Sbjct: 176 -HMAVLFSTHVLHDAEQVCDQVVIMKNGEISWKGELQELKQQQQTNVFTLSVKEKLE 231
>pir||A59189 ATP-binding cassette transporter - human (fragment)
>gi|5689461|dbj|BAA83014.1| (AB028985) KIAA1062 protein
[Homo sapiens]
Length = 1529
Score = 160 bits (400), Expect = 2e-38
Identities = 89/237 (37%), Positives = 139/237 (58%), Gaps = 4/237 (1%)
Query: 6 VENLVKKYGDFT--AVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAIVA 63
V+ L K Y D A+ +S + + ++ +FLG NGAGKTTT+ +LT L PTSG A +
Sbjct: 86 VDKLTKVYKDDKKLALNKLSLNLYENQVVSFLGHNGAGKTTTMSILTGLFPPTSGSATIY 145
Query: 64 GHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKFVE 123
GHD+ E E+RK +G+ Q L LT E+++ + + + E++ +++++++ +E
Sbjct: 146 GHDIRTEMDEIRKNLGMCPQHNVLFDRLTVEEHLWFYSRLKSMAQEEIRREMDKMIEDLE 205
Query: 124 LWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMKEE 183
L + V+ SGGM+R+L +A A + + LDEPT G+DP R IW+ I +K +
Sbjct: 206 LSNKRHSLVQTLSGGMKRKLSVAIAFVGGSRAIILDEPTAGVDPYARRAIWDLI--LKYK 263
Query: 184 HEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVGNDIIYLKLESPKE 240
TI L+TH+MDEA+ L DRIAII HGK+ G+ LK G+ ++ P E
Sbjct: 264 PGRTILLSTHHMDEADLLGDRIAIISHGKLKCCGSPLFLKGTYGDGYRLTLVKRPAE 320
Score = 149 bits (373), Expect = 4e-35
Identities = 98/325 (30%), Positives = 175/325 (53%), Gaps = 13/325 (4%)
Query: 4 IEVENLVKKY-----GDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSG 58
+++ENL K Y G AV + V+ GE F LG NGAGKT+T +LT T G
Sbjct: 1144 VKIENLTKVYKSRKIGRILAVDRLCLGVRPGECFGLLGVNGAGKTSTFKMLTGDESTTGG 1203
Query: 59 KAIVAGHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEEL 118
+A V GH V+KE +V++ +G Q +L ELTA E++ ++ + G+ ++ ++
Sbjct: 1204 EAFVNGHSVLKELLQVQQSLGYCPQCDALFDELTAREHLQLYTRLRGISWKDEARVVKWA 1263
Query: 119 LKFVELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIR 178
L+ +EL ++ D+P +SGG +R+L A ALI P +FLDEPT G+DP+ R +W I
Sbjct: 1264 LEKLELTKYADKPAGTYSGGNKRKLSTAIALIGYPAFIFLDEPTTGMDPKARRFLWNLIL 1323
Query: 179 TMKEEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVGNDIIYLKLESP 238
+ + ++ LT+H M+E E L R+AI+ +G++ G+ + LK G+ +
Sbjct: 1324 DLIKTGR-SVVLTSHSMEECEALCTRLAIMVNGRLRCLGSIQHLKNRFGDGYMITVRTKS 1382
Query: 239 KEELKCLKADFIRG-----CKLLPDGRVRIDVENATEALPKLFELAQKNN--VKILEVTY 291
+ +K + F R K +V+ +++ +L ++F ++ + + I + +
Sbjct: 1383 SQSVKDVVRFFNRNFPEAMLKERHHTKVQYQLKSEHISLAQVFSKMEQVSGVLGIEDYSV 1442
Query: 292 HRPTLNDVFLHLTGREIRDEEGGES 316
+ TL++VF++ ++ + E E+
Sbjct: 1443 SQTTLDNVFVNFAKKQSDNLEQQET 1467
>gb|AAG09372.1|AF178941_1 (AF178941) ATP-binding cassette sub-family A member 2 [Homo sapiens]
Length = 2436
Score = 160 bits (400), Expect = 2e-38
Identities = 89/237 (37%), Positives = 139/237 (58%), Gaps = 4/237 (1%)
Query: 6 VENLVKKYGDFT--AVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAIVA 63
V+ L K Y D A+ +S + + ++ +FLG NGAGKTTT+ +LT L PTSG A +
Sbjct: 993 VDKLTKVYKDDKKLALNKLSLNLYENQVVSFLGHNGAGKTTTMSILTGLFPPTSGSATIY 1052
Query: 64 GHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKFVE 123
GHD+ E E+RK +G+ Q L LT E+++ + + + E++ +++++++ +E
Sbjct: 1053 GHDIRTEMDEIRKNLGMCPQHNVLFDRLTVEEHLWFYSRLKSMAQEEIRREMDKMIEDLE 1112
Query: 124 LWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMKEE 183
L + V+ SGGM+R+L +A A + + LDEPT G+DP R IW+ I +K +
Sbjct: 1113 LSNKRHSLVQTLSGGMKRKLSVAIAFVGGSRAIILDEPTAGVDPYARRAIWDLI--LKYK 1170
Query: 184 HEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVGNDIIYLKLESPKE 240
TI L+TH+MDEA+ L DRIAII HGK+ G+ LK G+ ++ P E
Sbjct: 1171 PGRTILLSTHHMDEADLLGDRIAIISHGKLKCCGSPLFLKGTYGDGYRLTLVKRPAE 1227
Score = 149 bits (373), Expect = 4e-35
Identities = 98/325 (30%), Positives = 175/325 (53%), Gaps = 13/325 (4%)
Query: 4 IEVENLVKKY-----GDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSG 58
+++ENL K Y G AV + V+ GE F LG NGAGKT+T +LT T G
Sbjct: 2051 VKIENLTKVYKSRKIGRILAVDRLCLGVRPGECFGLLGVNGAGKTSTFKMLTGDESTTGG 2110
Query: 59 KAIVAGHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEEL 118
+A V GH V+KE +V++ +G Q +L ELTA E++ ++ + G+ ++ ++
Sbjct: 2111 EAFVNGHSVLKELLQVQQSLGYCPQCDALFDELTAREHLQLYTRLRGISWKDEARVVKWA 2170
Query: 119 LKFVELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIR 178
L+ +EL ++ D+P +SGG +R+L A ALI P +FLDEPT G+DP+ R +W I
Sbjct: 2171 LEKLELTKYADKPAGTYSGGNKRKLSTAIALIGYPAFIFLDEPTTGMDPKARRFLWNLIL 2230
Query: 179 TMKEEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVGNDIIYLKLESP 238
+ + ++ LT+H M+E E L R+AI+ +G++ G+ + LK G+ +
Sbjct: 2231 DLIKTGR-SVVLTSHSMEECEALCTRLAIMVNGRLRCLGSIQHLKNRFGDGYMITVRTKS 2289
Query: 239 KEELKCLKADFIRG-----CKLLPDGRVRIDVENATEALPKLFELAQKNN--VKILEVTY 291
+ +K + F R K +V+ +++ +L ++F ++ + + I + +
Sbjct: 2290 SQSVKDVVRFFNRNFPEAMLKERHHTKVQYQLKSEHISLAQVFSKMEQVSGVLGIEDYSV 2349
Query: 292 HRPTLNDVFLHLTGREIRDEEGGES 316
+ TL++VF++ ++ + E E+
Sbjct: 2350 SQTTLDNVFVNFAKKQSDNLEQQET 2374
>dbj|BAB06933.1| (AP001518) ABC transporter (ATP-binding protein) [Bacillus
halodurans]
Length = 318
Score = 160 bits (400), Expect = 2e-38
Identities = 98/302 (32%), Positives = 168/302 (55%), Gaps = 12/302 (3%)
Query: 4 IEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAIVA 63
I++ + K+Y D AV +S ++KGEIF LGPNGAGKTT++ ++ L +PTSG VA
Sbjct: 6 IKLNEITKRYDDHYAVDHLSLSIRKGEIFGLLGPNGAGKTTSILMMLGLSEPTSGTVQVA 65
Query: 64 GHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKFVE 123
G D K P EV++K+G + + ++T EN+ + G++ E E+ LL+ V
Sbjct: 66 GIDSTKYPIEVKRKVGYLPDNVGFYPDMTGMENLLYTASLNGIQKIEAIERANTLLEKVG 125
Query: 124 LWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMKEE 183
L + +S GM++RL +A L+ PEI+ LDEPT+G+DP+ IR + +
Sbjct: 126 LTEAAKKKTGQYSRGMKQRLGLADVLMKGPEIIILDEPTLGIDPEGVRDFLHLIRNLNQN 185
Query: 184 HEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEEL-KKLVGNDIIYLKL-ESPKEE 241
+T+ L +H++ + +Q+ DR+ I GK++A G ++L K+L ++ + + + SP +E
Sbjct: 186 ENLTVLLCSHHLHQVQQVCDRVGIFVDGKLLAYGDLDQLVKRLFKHESVVIHVAASPIDE 245
Query: 242 --LKCLKA-DFIRGCKLLPDGRVRIDV-ENATEALPKLFELAQKNNVKI------LEVTY 291
L LK + ++ ++ + R+ I E+A+ + KL + N + L+ Y
Sbjct: 246 SLLNQLKTIEQVKNVDVIQEDRLDIYCREDASATISKLIVESGSNLYHLYKKHFGLDEIY 305
Query: 292 HR 293
HR
Sbjct: 306 HR 307
>pir||S60124 transport protein homolog C48B4.4 - Caenorhabditis elegans
Length = 1767
Score = 159 bits (399), Expect = 3e-38
Identities = 91/229 (39%), Positives = 140/229 (60%), Gaps = 10/229 (4%)
Query: 4 IEVENLVKKYGDF--TAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAI 61
I V NLVK + AV G+S + +G+ LG NGAGK+TT + +++PT+G+
Sbjct: 611 IIVRNLVKIWSTTGERAVDGLSLRAVRGQCSILLGHNGAGKSTTFSSIAGIIRPTNGRIT 670
Query: 62 VAGHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKG---RELKEKIEEL 118
+ G+DV EP E R+ IG+ Q L +LT E++ + +YGLKG ++ K+ ++ L
Sbjct: 671 ICGYDVGNEPGETRRHIGMCPQYNPLYDQLTVSEHLKL---VYGLKGAREKDFKQDMKRL 727
Query: 119 LKFVELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIR 178
L V+L ++ SGGM+R+L + ALI + E++ LDEPT G+DP R + + +
Sbjct: 728 LSDVKLDFKENEKAVNLSGGMKRKLCVCMALIGDSEVVLLDEPTAGMDPGARQDVQKLVE 787
Query: 179 TMKEEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVG 227
+E+ TI LTTHYMDEAE+L D + I+ HGK++A GT++ LK+ G
Sbjct: 788 --REKANRTILLTTHYMDEAERLGDWVFIMSHGKLVASGTNQYLKQKFG 834
Score = 158 bits (395), Expect = 1e-37
Identities = 88/239 (36%), Positives = 140/239 (57%), Gaps = 8/239 (3%)
Query: 3 AIEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAIV 62
A+ +++L K +G FTAV + V + E F LG NGAGKTTT ++LT +SG+A++
Sbjct: 1441 ALVIKDLTKTFGRFTAVNELCLAVDQKECFGLLGVNGAGKTTTFNILTGQSFASSGEAMI 1500
Query: 63 AGHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKFV 122
G DV + IG Q +L +LT E++ I ++G + K K E +L+ V
Sbjct: 1501 GGRDVTE-----LISIGYCPQFDALMLDLTGRESLEILAQMHGFEN--YKAKAELILECV 1553
Query: 123 ELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMKE 182
+ D+ V+++SGG +R++ + AL+ +++ LDEPT G+DP+ R +WE + +E
Sbjct: 1554 GMIAHADKLVRFYSGGQKRKISVGVALLAPTQMIILDEPTAGIDPKARREVWELLLWCRE 1613
Query: 183 EHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVGND-IIYLKLESPKE 240
+ LT+H MDE E L RIA+++ G +IA G+S+ELK L GN+ + L L P +
Sbjct: 1614 HSNSALMLTSHSMDECEALCSRIAVLNRGSLIAIGSSQELKSLYGNNYTMTLSLYEPNQ 1672
>pir||T42749 ATP-binding cassette transport protein homolog - Caenorhabditis
elegans >gi|3172341|gb|AAC24116.1| (AF049142)
ATP-binding cassette transporter [Caenorhabditis
elegans]
Length = 1704
Score = 159 bits (399), Expect = 3e-38
Identities = 91/229 (39%), Positives = 140/229 (60%), Gaps = 10/229 (4%)
Query: 4 IEVENLVKKYGDF--TAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAI 61
I V NLVK + AV G+S + +G+ LG NGAGK+TT + +++PT+G+
Sbjct: 546 IIVRNLVKIWSTTGERAVDGLSLRAVRGQCSILLGHNGAGKSTTFSSIAGIIRPTNGRIT 605
Query: 62 VAGHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKG---RELKEKIEEL 118
+ G+DV EP E R+ IG+ Q L +LT E++ + +YGLKG ++ K+ ++ L
Sbjct: 606 ICGYDVGNEPGETRRHIGMCPQYNPLYDQLTVSEHLKL---VYGLKGAREKDFKQDMKRL 662
Query: 119 LKFVELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIR 178
L V+L ++ SGGM+R+L + ALI + E++ LDEPT G+DP R + + +
Sbjct: 663 LSDVKLDFKENEKAVNLSGGMKRKLCVCMALIGDSEVVLLDEPTAGMDPGARQDVQKLVE 722
Query: 179 TMKEEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVG 227
+E+ TI LTTHYMDEAE+L D + I+ HGK++A GT++ LK+ G
Sbjct: 723 --REKANRTILLTTHYMDEAERLGDWVFIMSHGKLVASGTNQYLKQKFG 769
Score = 158 bits (395), Expect = 1e-37
Identities = 88/239 (36%), Positives = 140/239 (57%), Gaps = 8/239 (3%)
Query: 3 AIEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAIV 62
A+ +++L K +G FTAV + V + E F LG NGAGKTTT ++LT +SG+A++
Sbjct: 1378 ALVIKDLTKTFGRFTAVNELCLAVDQKECFGLLGVNGAGKTTTFNILTGQSFASSGEAMI 1437
Query: 63 AGHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKFV 122
G DV + IG Q +L +LT E++ I ++G + K K E +L+ V
Sbjct: 1438 GGRDVTE-----LISIGYCPQFDALMLDLTGRESLEILAQMHGFEN--YKAKAELILECV 1490
Query: 123 ELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMKE 182
+ D+ V+++SGG +R++ + AL+ +++ LDEPT G+DP+ R +WE + +E
Sbjct: 1491 GMIAHADKLVRFYSGGQKRKISVGVALLAPTQMIILDEPTAGIDPKARREVWELLLWCRE 1550
Query: 183 EHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVGND-IIYLKLESPKE 240
+ LT+H MDE E L RIA+++ G +IA G+S+ELK L GN+ + L L P +
Sbjct: 1551 HSNSALMLTSHSMDECEALCSRIAVLNRGSLIAIGSSQELKSLYGNNYTMTLSLYEPNQ 1609
>pir||A71243 probable maltose/maltodextrin transport ATP-binding protein -
Pyrococcus horikoshii >gi|3256589|dbj|BAA29272.1|
(AP000001) 362aa long hypothetical maltose/maltodextrin
transport ATP-binding protein [Pyrococcus horikoshii]
Length = 362
Score = 159 bits (399), Expect = 3e-38
Identities = 85/222 (38%), Positives = 135/222 (60%), Gaps = 1/222 (0%)
Query: 1 MYAIEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKA 60
M I++EN+VKK+G+FTA+ I+ K+K GE A LGP+G+GK+T ++ + + KPTSGK
Sbjct: 1 MVEIKLENIVKKFGNFTALNNINLKIKDGEFMALLGPSGSGKSTLLYTIAGIYKPTSGKI 60
Query: 61 IVAGHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLK 120
DV + P + R +G+VFQ+ +L +T Y+N+ + E+ +K+ E+ K
Sbjct: 61 YFDEKDVTELPPKDRN-VGLVFQNWALYPHMTVYKNIAFPLELRKAPREEIDKKVREVAK 119
Query: 121 FVELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTM 180
+ + + +R SGG Q+R+ IARAL+ EPE+L LDEP LD R + ++ +
Sbjct: 120 MLHIDKLLNRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRL 179
Query: 181 KEEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEEL 222
++E +T TH EA +ADRIA+I G+I+ GT +E+
Sbjct: 180 QKELGITTVYVTHDQAEALAMADRIAVIREGEILQVGTPDEV 221
>sp|P34358|YLH4_CAEEL PUTATIVE ABC TRANSPORTER C48B4.4 IN CHROMOSOME III
Length = 1758
Score = 159 bits (399), Expect = 3e-38
Identities = 91/229 (39%), Positives = 140/229 (60%), Gaps = 10/229 (4%)
Query: 4 IEVENLVKKYGDF--TAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAI 61
I V NLVK + AV G+S + +G+ LG NGAGK+TT + +++PT+G+
Sbjct: 600 IIVRNLVKIWSTTGERAVDGLSLRAVRGQCSILLGHNGAGKSTTFSSIAGIIRPTNGRIT 659
Query: 62 VAGHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKG---RELKEKIEEL 118
+ G+DV EP E R+ IG+ Q L +LT E++ + +YGLKG ++ K+ ++ L
Sbjct: 660 ICGYDVGNEPGETRRHIGMCPQYNPLYDQLTVSEHLKL---VYGLKGAREKDFKQDMKRL 716
Query: 119 LKFVELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIR 178
L V+L ++ SGGM+R+L + ALI + E++ LDEPT G+DP R + + +
Sbjct: 717 LSDVKLDFKENEKAVNLSGGMKRKLCVCMALIGDSEVVLLDEPTAGMDPGARQDVQKLVE 776
Query: 179 TMKEEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVG 227
+E+ TI LTTHYMDEAE+L D + I+ HGK++A GT++ LK+ G
Sbjct: 777 --REKANRTILLTTHYMDEAERLGDWVFIMSHGKLVASGTNQYLKQKFG 823
Score = 158 bits (395), Expect = 1e-37
Identities = 88/239 (36%), Positives = 140/239 (57%), Gaps = 8/239 (3%)
Query: 3 AIEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAIV 62
A+ +++L K +G FTAV + V + E F LG NGAGKTTT ++LT +SG+A++
Sbjct: 1432 ALVIKDLTKTFGRFTAVNELCLAVDQKECFGLLGVNGAGKTTTFNILTGQSFASSGEAMI 1491
Query: 63 AGHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKFV 122
G DV + IG Q +L +LT E++ I ++G + K K E +L+ V
Sbjct: 1492 GGRDVTE-----LISIGYCPQFDALMLDLTGRESLEILAQMHGFEN--YKAKAELILECV 1544
Query: 123 ELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMKE 182
+ D+ V+++SGG +R++ + AL+ +++ LDEPT G+DP+ R +WE + +E
Sbjct: 1545 GMIAHADKLVRFYSGGQKRKISVGVALLAPTQMIILDEPTAGIDPKARREVWELLLWCRE 1604
Query: 183 EHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVGND-IIYLKLESPKE 240
+ LT+H MDE E L RIA+++ G +IA G+S+ELK L GN+ + L L P +
Sbjct: 1605 HSNSALMLTSHSMDECEALCSRIAVLNRGSLIAIGSSQELKSLYGNNYTMTLSLYEPNQ 1663
>emb|CAA82383.2| (Z29117) contains similarity to Pfam domain: PF00005 (ABC
transporter), Score=319.9, E-value=9.7e-93, N=2~cDNA EST
yk8d5.5 comes from this gene; cDNA EST yk10f12.3 comes
from this gene~cDNA EST yk5b3.3 comes from this gene;
cDNA EST yk5b3.5 comes from >
Length = 1689
Score = 159 bits (399), Expect = 3e-38
Identities = 91/229 (39%), Positives = 140/229 (60%), Gaps = 10/229 (4%)
Query: 4 IEVENLVKKYGDF--TAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAI 61
I V NLVK + AV G+S + +G+ LG NGAGK+TT + +++PT+G+
Sbjct: 533 IIVRNLVKIWSTTGERAVDGLSLRAVRGQCSILLGHNGAGKSTTFSSIAGIIRPTNGRIT 592
Query: 62 VAGHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKG---RELKEKIEEL 118
+ G+DV EP E R+ IG+ Q L +LT E++ + +YGLKG ++ K+ ++ L
Sbjct: 593 ICGYDVGNEPGETRRHIGMCPQYNPLYDQLTVSEHLKL---VYGLKGAREKDFKQDMKRL 649
Query: 119 LKFVELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIR 178
L V+L ++ SGGM+R+L + ALI + E++ LDEPT G+DP R + + +
Sbjct: 650 LSDVKLDFKENEKAVNLSGGMKRKLCVCMALIGDSEVVLLDEPTAGMDPGARQDVQKLVE 709
Query: 179 TMKEEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVG 227
+E+ TI LTTHYMDEAE+L D + I+ HGK++A GT++ LK+ G
Sbjct: 710 --REKANRTILLTTHYMDEAERLGDWVFIMSHGKLVASGTNQYLKQKFG 756
Score = 158 bits (395), Expect = 1e-37
Identities = 88/239 (36%), Positives = 140/239 (57%), Gaps = 8/239 (3%)
Query: 3 AIEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAIV 62
A+ +++L K +G FTAV + V + E F LG NGAGKTTT ++LT +SG+A++
Sbjct: 1363 ALVIKDLTKTFGRFTAVNELCLAVDQKECFGLLGVNGAGKTTTFNILTGQSFASSGEAMI 1422
Query: 63 AGHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKFV 122
G DV + IG Q +L +LT E++ I ++G + K K E +L+ V
Sbjct: 1423 GGRDVTE-----LISIGYCPQFDALMLDLTGRESLEILAQMHGFEN--YKAKAELILECV 1475
Query: 123 ELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMKE 182
+ D+ V+++SGG +R++ + AL+ +++ LDEPT G+DP+ R +WE + +E
Sbjct: 1476 GMIAHADKLVRFYSGGQKRKISVGVALLAPTQMIILDEPTAGIDPKARREVWELLLWCRE 1535
Query: 183 EHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVGND-IIYLKLESPKE 240
+ LT+H MDE E L RIA+++ G +IA G+S+ELK L GN+ + L L P +
Sbjct: 1536 HSNSALMLTSHSMDECEALCSRIAVLNRGSLIAIGSSQELKSLYGNNYTMTLSLYEPNQ 1594
>emb|CAA82384.2| (Z29117) contains similarity to Pfam domain: PF00005 (ABC
transporter), Score=319.9, E-value=9.7e-93, N=2~cDNA EST
yk251b11.3 comes from this gene~cDNA EST yk251b11.5
comes from this gene~cDNA EST yk576e5.5 comes from this
gene~cDNA EST yk595f5.5 comes>
Length = 1691
Score = 159 bits (399), Expect = 3e-38
Identities = 91/229 (39%), Positives = 140/229 (60%), Gaps = 10/229 (4%)
Query: 4 IEVENLVKKYGDF--TAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAI 61
I V NLVK + AV G+S + +G+ LG NGAGK+TT + +++PT+G+
Sbjct: 533 IIVRNLVKIWSTTGERAVDGLSLRAVRGQCSILLGHNGAGKSTTFSSIAGIIRPTNGRIT 592
Query: 62 VAGHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKG---RELKEKIEEL 118
+ G+DV EP E R+ IG+ Q L +LT E++ + +YGLKG ++ K+ ++ L
Sbjct: 593 ICGYDVGNEPGETRRHIGMCPQYNPLYDQLTVSEHLKL---VYGLKGAREKDFKQDMKRL 649
Query: 119 LKFVELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIR 178
L V+L ++ SGGM+R+L + ALI + E++ LDEPT G+DP R + + +
Sbjct: 650 LSDVKLDFKENEKAVNLSGGMKRKLCVCMALIGDSEVVLLDEPTAGMDPGARQDVQKLVE 709
Query: 179 TMKEEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVG 227
+E+ TI LTTHYMDEAE+L D + I+ HGK++A GT++ LK+ G
Sbjct: 710 --REKANRTILLTTHYMDEAERLGDWVFIMSHGKLVASGTNQYLKQKFG 756
Score = 158 bits (395), Expect = 1e-37
Identities = 88/239 (36%), Positives = 140/239 (57%), Gaps = 8/239 (3%)
Query: 3 AIEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAIV 62
A+ +++L K +G FTAV + V + E F LG NGAGKTTT ++LT +SG+A++
Sbjct: 1365 ALVIKDLTKTFGRFTAVNELCLAVDQKECFGLLGVNGAGKTTTFNILTGQSFASSGEAMI 1424
Query: 63 AGHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKFV 122
G DV + IG Q +L +LT E++ I ++G + K K E +L+ V
Sbjct: 1425 GGRDVTE-----LISIGYCPQFDALMLDLTGRESLEILAQMHGFEN--YKAKAELILECV 1477
Query: 123 ELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMKE 182
+ D+ V+++SGG +R++ + AL+ +++ LDEPT G+DP+ R +WE + +E
Sbjct: 1478 GMIAHADKLVRFYSGGQKRKISVGVALLAPTQMIILDEPTAGIDPKARREVWELLLWCRE 1537
Query: 183 EHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVGND-IIYLKLESPKE 240
+ LT+H MDE E L RIA+++ G +IA G+S+ELK L GN+ + L L P +
Sbjct: 1538 HSNSALMLTSHSMDECEALCSRIAVLNRGSLIAIGSSQELKSLYGNNYTMTLSLYEPNQ 1596
>emb|CAB76006.1| (AL157916) putative ABC transporter, ATP-binding subunit
[Streptomyces coelicolor A3(2)]
Length = 312
Score = 159 bits (398), Expect = 4e-38
Identities = 107/307 (34%), Positives = 157/307 (50%), Gaps = 14/307 (4%)
Query: 1 MYAIEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKA 60
M IEV +L K YG V G+SF V++GEIF LGPNGAGKTTTV + L P +G+
Sbjct: 13 MPVIEVTDLRKSYGGRPVVDGVSFAVEEGEIFGVLGPNGAGKTTTVECVEGLRVPDAGRV 72
Query: 61 IVAGHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKG--RELKEKIEEL 118
V G D V + + V + +G Q L +LT E + ++ Y R L E++
Sbjct: 73 RVTGLDPVADHRRVAEVLGAQLQQSELQPKLTVREALELYAAFYPKPADWRPLAERL--- 129
Query: 119 LKFVELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIR 178
+L D SGG ++RL IA AL+ +P ++ LDE T GLDP+ R W+ I
Sbjct: 130 ----DLVPMLDTRFAKLSGGQKQRLFIALALVGDPRVVVLDELTTGLDPRARRETWQLIE 185
Query: 179 TMKEEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEEL-KKLVGNDIIYLKLES 237
++ +T+ L TH+M+EA++L DRIA+ID G+I A T L ++ G +I +
Sbjct: 186 DIR-AGGVTVLLVTHFMEEAQRLCDRIAVIDRGRIAALDTPAGLIRRSTGATVISFTPSA 244
Query: 238 PKEELKCLKADFIRGCKLLPDGRVRIDVENATEALPKLFELAQKNNVKILEVTYHRPTLN 297
P +E + + DGRV + E + + L + V ++ TL+
Sbjct: 245 PLDEADLRALPELASAE-FRDGRVTL--SGTDETVNAVITLLARTRVTAHQLRVTDTTLD 301
Query: 298 DVFLHLT 304
D FL LT
Sbjct: 302 DAFLDLT 308
>dbj|BAB16596.1| (AB037937) ABC2 [Rattus norvegicus]
Length = 2434
Score = 159 bits (398), Expect = 4e-38
Identities = 88/237 (37%), Positives = 141/237 (59%), Gaps = 4/237 (1%)
Query: 6 VENLVKKYGDFT--AVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAIVA 63
V+ L K Y + A+ +S + + ++ +FLG NGAGKTTT+ +LT L PTSG A +
Sbjct: 992 VDKLTKVYKNDKKLALNKLSLNLYENQVVSFLGHNGAGKTTTMSILTGLFPPTSGSATIY 1051
Query: 64 GHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKFVE 123
GHD+ E E+RK +G+ Q L +LT E+++ + + + E++++++++++ +E
Sbjct: 1052 GHDIRTEMDEIRKNLGMCPQHNVLFDQLTVEEHLWFYSRLKSMAQEEIRKEMDKMIEDLE 1111
Query: 124 LWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMKEE 183
L + V+ SGGM+R+L +A A + + LDEPT G+DP R IW+ I +K +
Sbjct: 1112 LSNKRHSLVQTLSGGMKRKLSVAIAFVGGSRAIILDEPTAGVDPYARRAIWDLI--LKYK 1169
Query: 184 HEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVGNDIIYLKLESPKE 240
TI L+TH+MDEA+ L DRIAII HGK+ G+ LK G+ ++ P E
Sbjct: 1170 PGRTILLSTHHMDEADLLGDRIAIISHGKLKCCGSPLFLKGAYGDGYRLTLVKRPAE 1226
Score = 144 bits (360), Expect = 1e-33
Identities = 96/325 (29%), Positives = 172/325 (52%), Gaps = 13/325 (4%)
Query: 4 IEVENLVKKY-----GDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSG 58
+++ENL K Y G AV + V+ GE F LG NGAGKT+T +LT T G
Sbjct: 2051 VKIENLTKVYKSRKIGRILAVDRLCLGVRPGECFGLLGVNGAGKTSTFKMLTGDESTTGG 2110
Query: 59 KAIVAGHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEEL 118
+A V GH V+K+ +V++ +G Q +L ELTA E++ ++ + G+ ++ + +
Sbjct: 2111 EAFVNGHSVLKDLLQVQQSLGYCPQFDALFDELTAREHLQLYTRLRGIPWKDEAQVVRWA 2170
Query: 119 LKFVELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIR 178
L+ +EL + D+P +SGG +R+L A ALI P +FLDEPT G+DP+ R +W I
Sbjct: 2171 LEKLELTKCADKPAGSYSGGNKRKLSTAIALIGYPAFIFLDEPTTGMDPKARRFLWNLIL 2230
Query: 179 TMKEEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVGNDIIYLKLESP 238
+ + ++ LT+H M+E E + R+AI+ +G++ G+ + LK G+ +
Sbjct: 2231 DLIKTGR-SVVLTSHSMEECEAVCTRLAIMVNGRLRCLGSIQHLKNRFGDGYMITVRTKS 2289
Query: 239 KEELKCLKADFIRG-----CKLLPDGRVRIDVENATEALPKLFELAQK--NNVKILEVTY 291
+ +K + F R K +V+ +++ +L ++F + + I + +
Sbjct: 2290 SQNVKDVVRFFNRNFPEAMLKERHHTKVQYQLKSEHISLAQVFSKMEHVVGVLGIEDYSV 2349
Query: 292 HRPTLNDVFLHLTGREIRDEEGGES 316
+ TL++VF++ ++ + E E+
Sbjct: 2350 SQTTLDNVFVNFAKKQSDNVEQQEA 2374
>pir||A70194 ABC transporter, ATP-binding protein homolog - Lyme disease
spirochete >gi|2688689|gb|AAC67099.1| (AE001175) ABC
transporter, ATP-binding protein [Borrelia burgdorferi]
Length = 309
Score = 157 bits (394), Expect = 1e-37
Identities = 98/307 (31%), Positives = 170/307 (54%), Gaps = 10/307 (3%)
Query: 4 IEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAIVA 63
I VE + K YG FTA+ +SFKV++GE+ LGPNGAGK+T + +LT+ P+ G +
Sbjct: 2 INVEKVTKMYGPFTALFNVSFKVEEGEVLGILGPNGAGKSTLIKILTSFHYPSKGNVKIF 61
Query: 64 GHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKFVE 123
G D+V+ +E+ ++IG V + +L EL+ E + I G+K +LK++I+ ++ +
Sbjct: 62 GKDIVEHSKEILQQIGYVPEKLALYPELSVKEYLKFISEIKGVK--KLKKEIDRVISIFK 119
Query: 124 LWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMKEE 183
L +D+ + S G ++R+ IA ALI+ P+++ LDEPT GLDP E++R + +
Sbjct: 120 LKEVEDKLISQLSKGFRQRVGIAGALINNPKLVILDEPTNGLDPNQIIEFKEFLRELAK- 178
Query: 184 HEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEEL----KKLVGNDIIYLKLESPK 239
E TI ++H + E E + RI I+++G I+A+ T E + K + ++I K +
Sbjct: 179 -ESTILFSSHILSEVESICKRIIIVNNGVIVADDTKENIIKNKLKEIEIELIVSKKSENE 237
Query: 240 EELKCLKADFIRGCKLLPDGR-VRIDVE-NATEALPKLFELAQKNNVKILEVTYHRPTLN 297
+++ K D KL + + I ++ + + LF KNN+ + + +L
Sbjct: 238 KKIFNSKNDIFSLIKLEEHEKDLNISLKLSQGKTEEDLFSYIVKNNIILKAMIPKHESLE 297
Query: 298 DVFLHLT 304
+F LT
Sbjct: 298 KIFSKLT 304
>pir||A75208 sugar transport ATP-binding protein. PAB2232 - Pyrococcus abyssi
(strain Orsay) >gi|5457621|emb|CAB49112.1| (AJ248283)
SUGAR TRANSPORT ATP-BINDING PROTEIN. [Pyrococcus abyssi]
Length = 362
Score = 157 bits (394), Expect = 1e-37
Identities = 85/222 (38%), Positives = 133/222 (59%), Gaps = 1/222 (0%)
Query: 1 MYAIEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKA 60
M I +EN+VKK+G+F A+ I+ ++K GE A LGP+G+GK+T ++ + + KPTSG+
Sbjct: 1 MVRIRLENIVKKFGNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRI 60
Query: 61 IVAGHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLK 120
DV + P + R IG+VFQ+ +L +T Y+N+ + E+ EK+ ++ K
Sbjct: 61 YFDERDVTELPPKDRN-IGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRKVAK 119
Query: 121 FVELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTM 180
+ + + DR SGG Q+R+ IARAL+ EPE+L LDEP LD R + ++ +
Sbjct: 120 MLHIEKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRL 179
Query: 181 KEEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEEL 222
++E +T TH EA +ADRIA+I GKI+ GT +E+
Sbjct: 180 QKELGITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEV 221
>gb|AAF49305.1| (AE003522) CG5944 gene product [Drosophila melanogaster]
Length = 1463
Score = 157 bits (394), Expect = 1e-37
Identities = 93/308 (30%), Positives = 152/308 (49%), Gaps = 25/308 (8%)
Query: 4 IEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAIVA 63
+++ L K +G VK +SF + +G+I +G NGAGKTT + +L + PTSG A++
Sbjct: 339 VQIRGLSKTFGKMEVVKNVSFDMFEGQITVLMGHNGAGKTTLISMLAGFISPTSGTALIN 398
Query: 64 GHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKFVE 123
G D+ +E ++ ++ IG+ Q L + L++ ++ + + GL+G E+K +++ LK +
Sbjct: 399 GFDIRQERRQAQRCIGLCPQQNVLFKHLSSVSHIQLFSRLRGLRGAEVKSEVQNYLKKLN 458
Query: 124 LWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMKEE 183
L K + SGG QRRL +A +L ++L DEP+ GLDP R +W I KE
Sbjct: 459 LQEKKRLAARNLSGGTQRRLSVACSLCGGVKVLICDEPSTGLDPSARRELWRLILEAKE- 517
Query: 184 HEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVGNDIIYLKLESPKEELK 243
TI LTTH +D+ E L DR+ II G++ G+ LKK V
Sbjct: 518 -GCTILLTTHQLDDGEVLGDRVVIISDGQLRCIGSLPFLKKQVD---------------- 560
Query: 244 CLKADFIRGCKLLPDGRVRIDVENATEALPKLFELAQKNNVKILEVTYHRPTLNDVFLHL 303
C + + R R D+E T + + Q ++K +V Y P +
Sbjct: 561 -------ASCLITCEARKRCDLEKLTSLISRHVGTIQPFSIKGRDVCYKLPLSKSKYFSS 613
Query: 304 TGREIRDE 311
R++ +
Sbjct: 614 LFRDLESQ 621
Score = 119 bits (295), Expect = 5e-26
Identities = 69/225 (30%), Positives = 117/225 (51%), Gaps = 3/225 (1%)
Query: 3 AIEVENLVKKYG-DFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAI 61
A+ V + KKYG D AV ISF +K LGPNGAGKTTT ++ G
Sbjct: 1049 ALVVNGVSKKYGCDQLAVNNISFALKPSHCVGLLGPNGAGKTTTFKMIVGEHSIDKGNIY 1108
Query: 62 VAGHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKF 121
++G+ + + + K++G Q S LT + + + +I+G ++L ++ E+L
Sbjct: 1109 ISGYSMRMKRNKAMKELGYCPQSDSFFEFLTGRQLLKVFLLIWGFPSKDLNKRCEKLADQ 1168
Query: 122 VELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMK 181
+ D+ + Y+SGG +R++ A A ++ LDEP+ G+DP +R H+W I +
Sbjct: 1169 FGFRKHLDKKITYYSGGTKRKINAAVA-CGANSLICLDEPSAGVDPASRRHVWTIINEVA 1227
Query: 182 EEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLV 226
++ + + LT+H MDE L + I+ G I A G+ + +K +
Sbjct: 1228 QQGK-AVLLTSHNMDEINALCSKSVILVDGSIYAMGSVQHVKNKI 1271
>gb|AAF49304.2| (AE003522) NUCB1 gene product [Drosophila melanogaster]
Length = 1981
Score = 157 bits (394), Expect = 1e-37
Identities = 93/308 (30%), Positives = 152/308 (49%), Gaps = 25/308 (8%)
Query: 4 IEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAIVA 63
+++ L K +G VK +SF + +G+I +G NGAGKTT + +L + PTSG A++
Sbjct: 857 VQIRGLSKTFGKMEVVKNVSFDMFEGQITVLMGHNGAGKTTLISMLAGFISPTSGTALIN 916
Query: 64 GHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKFVE 123
G D+ +E ++ ++ IG+ Q L + L++ ++ + + GL+G E+K +++ LK +
Sbjct: 917 GFDIRQERRQAQRCIGLCPQQNVLFKHLSSVSHIQLFSRLRGLRGAEVKSEVQNYLKKLN 976
Query: 124 LWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMKEE 183
L K + SGG QRRL +A +L ++L DEP+ GLDP R +W I KE
Sbjct: 977 LQEKKRLAARNLSGGTQRRLSVACSLCGGVKVLICDEPSTGLDPSARRELWRLILEAKE- 1035
Query: 184 HEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVGNDIIYLKLESPKEELK 243
TI LTTH +D+ E L DR+ II G++ G+ LKK V
Sbjct: 1036 -GCTILLTTHQLDDGEVLGDRVVIISDGQLRCIGSLPFLKKQVD---------------- 1078
Query: 244 CLKADFIRGCKLLPDGRVRIDVENATEALPKLFELAQKNNVKILEVTYHRPTLNDVFLHL 303
C + + R R D+E T + + Q ++K +V Y P +
Sbjct: 1079 -------ASCLITCEARKRCDLEKLTSLISRHVGTIQPFSIKGRDVCYKLPLSKSKYFSS 1131
Query: 304 TGREIRDE 311
R++ +
Sbjct: 1132 LFRDLESQ 1139
Score = 119 bits (295), Expect = 5e-26
Identities = 69/225 (30%), Positives = 117/225 (51%), Gaps = 3/225 (1%)
Query: 3 AIEVENLVKKYG-DFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAI 61
A+ V + KKYG D AV ISF +K LGPNGAGKTTT ++ G
Sbjct: 1567 ALVVNGVSKKYGCDQLAVNNISFALKPSHCVGLLGPNGAGKTTTFKMIVGEHSIDKGNIY 1626
Query: 62 VAGHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKF 121
++G+ + + + K++G Q S LT + + + +I+G ++L ++ E+L
Sbjct: 1627 ISGYSMRMKRNKAMKELGYCPQSDSFFEFLTGRQLLKVFLLIWGFPSKDLNKRCEKLADQ 1686
Query: 122 VELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMK 181
+ D+ + Y+SGG +R++ A A ++ LDEP+ G+DP +R H+W I +
Sbjct: 1687 FGFRKHLDKKITYYSGGTKRKINAAVA-CGANSLICLDEPSAGVDPASRRHVWTIINEVA 1745
Query: 182 EEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLV 226
++ + + LT+H MDE L + I+ G I A G+ + +K +
Sbjct: 1746 QQGK-AVLLTSHNMDEINALCSKSVILVDGSIYAMGSVQHVKNKI 1789
>dbj|BAB08166.1| (AB030831) SrtF [Streptococcus pyogenes]
Length = 229
Score = 157 bits (393), Expect = 2e-37
Identities = 93/234 (39%), Positives = 138/234 (58%), Gaps = 11/234 (4%)
Query: 4 IEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAIVA 63
++++NL K YG T + ++ + KG+++A +GPNGAGK+T + +LT L+ TSG I
Sbjct: 2 LKIQNLKKSYGKRTILNNVNMNIPKGKVYALIGPNGAGKSTIMKILTGLVSKTSGSIIFE 61
Query: 64 GHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKFVE 123
G + + +KIG + ++P L + L+AY+NM + + G+ + I LL V
Sbjct: 62 GREWSRRD---LRKIGSIIEEPPLYKNLSAYDNMKVVTTMLGVS----ESTILPLLNKVG 114
Query: 124 LWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMKEE 183
L RPVK FS GM++RL IA +LI+ P++L LDEPT GLDP + E I + K E
Sbjct: 115 LGNIDKRPVKQFSLGMKQRLGIAISLINSPKLLILDEPTNGLDPIGIQELREIIESFKSE 174
Query: 184 HEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAE---GTSEELKKLVGNDIIYLK 234
MTI +++H + E E LAD I I GKII E SE L++L N I++ K
Sbjct: 175 -GMTIMISSHILSEVEHLADFIGFIYEGKIILEKEYDGSENLEELFNNQILFEK 227
>dbj|BAB04009.1| (AP001508) ABC transporter (ATP-binding protein) [Bacillus
halodurans]
Length = 301
Score = 157 bits (393), Expect = 2e-37
Identities = 95/302 (31%), Positives = 172/302 (56%), Gaps = 9/302 (2%)
Query: 4 IEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAIVA 63
+E++++ KKY + TAV S + GE +GPNGAGKTT + ++T +L PT G ++
Sbjct: 3 LEIKSVTKKYKEKTAVHDFSMDLLSGECVGLIGPNGAGKTTLIKMITNILDPTRGDILLN 62
Query: 64 GHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKFVE 123
G K E++++IG + Q P + +TA E + G + G+ ++L + I E+L V
Sbjct: 63 G----KRISEMKREIGYLPQYPDFYQWMTASETLLFMGQLSGISKKKLTKSIPEILSKVG 118
Query: 124 LWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMKEE 183
L ++ V FSGGM++RL IA+AL+H+P + +DEP LDP R + I +K+
Sbjct: 119 LRGEENSKVSTFSGGMKQRLGIAQALLHKPSFIVMDEPVSALDPIGRREVLNIIEEIKK- 177
Query: 184 HEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVGNDIIYLKL-ESPKEEL 242
+ TI L+TH + +AE++ +R+ +I +G+ I + T EL + I +++ + K+ +
Sbjct: 178 -DSTILLSTHILADAEEICERLVMIKNGEKIEDTTMMELLNRNSKNKIRVEITDESKDWI 236
Query: 243 KCL-KADFIRGCKLLPDGRVRIDVENATEALPKLFELAQKNNVKILEVTYHRPTLNDVFL 301
+ + K ++++ + + +V ++V+N L A K++V I++ TL ++FL
Sbjct: 237 EVVKKLNYVQDVE-VTGNKVNVEVKNIELHKNMLLANALKHDVNIVKFELDHDTLEELFL 295
Query: 302 HL 303
L
Sbjct: 296 KL 297
>pir||T22748 hypothetical protein F55G11.9 - Caenorhabditis elegans
>gi|3877692|emb|CAB05222.1| (Z82272) predicted using
Genefinder~contains similarity to Pfam domain: PF00005
(ABC transporter), Score=329.9, E-value=9.1e-96, N=2
[Caenorhabditis elegans]
Length = 1431
Score = 156 bits (391), Expect = 3e-37
Identities = 90/247 (36%), Positives = 137/247 (55%), Gaps = 11/247 (4%)
Query: 6 VENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAIVAGH 65
+ L+K +G F AV G+S V E F LG NGAGKTTT ++T L PT G+ + GH
Sbjct: 1131 INGLIKDFGKFRAVNGLSVTVDHEECFGMLGANGAGKTTTFDIITGLTMPTGGRVTIDGH 1190
Query: 66 DVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKFVELW 125
D+ + IG Q ++ ++++ E + I G + E ++ +L V +
Sbjct: 1191 DISRTIH-----IGYCPQFDAMLQQISCRETLMIMAKFQGYAN--VSEVVDLVLDCVGMA 1243
Query: 126 RFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMKEEHE 185
F ++ VK SGG +R++ + AL+ + LDEPT G+DP+ R IW+ I M+E+ +
Sbjct: 1244 DFGNKLVKNCSGGQKRKISVGIALMSRATCIILDEPTAGIDPRARREIWDIIHEMREQAK 1303
Query: 186 MTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVGN----DIIYLKLESPKEE 241
+I LT+H M+E E L RI I+ +G++IA GTS+ LK GN +I KLE K
Sbjct: 1304 CSIVLTSHSMEECEALCTRIGILRNGEMIALGTSQSLKSQYGNTYMMTLILNKLEDRKSV 1363
Query: 242 LKCLKAD 248
+ +KAD
Sbjct: 1364 CQIVKAD 1370
Score = 146 bits (366), Expect = 2e-34
Identities = 87/242 (35%), Positives = 133/242 (54%), Gaps = 7/242 (2%)
Query: 4 IEVENLVKKYGDFT-AVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAIV 62
IE+ LVK Y + AV G+S + +G++ LG NG GK+TT ++T + K T G+ I+
Sbjct: 447 IELSGLVKVYTNGEKAVNGLSLRAIRGQVSILLGHNGCGKSTTFGMITGMHKATEGRVII 506
Query: 63 AGHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKFV 122
G D RK IG Q L +LT E++ + + G K + + LL+ +
Sbjct: 507 GGIDANSHRAAARKMIGYCPQYNPLYDKLTVMEHLKLVNALKGGSKLTFKVEADSLLQQI 566
Query: 123 ELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMKE 182
EL +D K SGGM+R+L + A+I ++ LDEPT G+DP R + + +K
Sbjct: 567 ELTDKRDTLAKNLSGGMKRKLCVCMAMIGGSRVILLDEPTAGMDPSARIDVQRMLALVKA 626
Query: 183 EHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVGN----DIIYLKLESP 238
+ TI LTTHYMDEAE+L D I ++ HGK+ A G++ LK+ G+ I++ + P
Sbjct: 627 DR--TILLTTHYMDEAEKLGDWIFVMSHGKMAASGSNHYLKQKYGSGMLLTIVFKNIHDP 684
Query: 239 KE 240
K+
Sbjct: 685 KK 686
>dbj|BAB04537.1| (AP001509) bacitracin ABC transporter (ATP-binding protein)
[Bacillus halodurans]
Length = 314
Score = 156 bits (391), Expect = 3e-37
Identities = 101/317 (31%), Positives = 166/317 (51%), Gaps = 12/317 (3%)
Query: 4 IEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAIVA 63
I NL K + + ++ V KGEI+ FLGPNGAGKTT + +L +KP++G+ +
Sbjct: 5 ITTRNLTKTFQGKEIISNLNLHVNKGEIYGFLGPNGAGKTTVMKMLMNFVKPSAGEIELF 64
Query: 64 GHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKFVE 123
G + + E+ K+IG + + P +L+A EN+ +H G IEE L+ V+
Sbjct: 65 GQRLTSQSYEMLKRIGSMIEFPIFYEKLSARENLELHCEYMGYYK---PSAIEEALEMVK 121
Query: 124 LWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMKEE 183
L + VK FS GM++RL IARA+ +PE+L LDEP GLDP I + +T+ E
Sbjct: 122 LQLTGSKAVKDFSLGMKQRLGIARAICTKPELLILDEPINGLDPVGIKEIRQLFQTLCNE 181
Query: 184 HEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVGNDIIYLKLESPKEELK 243
+ +TI +++H + E EQ+AD + +I +G ++AE ++++ I L ++ K
Sbjct: 182 YGVTILISSHILSEIEQIADTVGVIRNGMLVAEVALDDIRSQQTEYIELLTYDARKALYV 241
Query: 244 CLKADFIRGCKLLPDGRVRIDVENATEALPKLFELAQKNNVKILEVTYHRPTLNDVFLHL 303
++ KL+ +RI + T+ +L + N+V I + +L D F++L
Sbjct: 242 LDNELGLKNVKLMDQSLIRIYDHHLTQ--NQLSKTLISNDVNIEAIARKNHSLEDYFMNL 299
Query: 304 TGREIRDEEGGESFARV 320
EG E+ A V
Sbjct: 300 I-------EGDENSAEV 309
>pir||G64435 cobalt transport ATP-binding protein O homolog - Methanococcus
jannaschii >gi|1591732|gb|AAB99089.1| (U67551) cobalt
transport ATP-binding protein (cbiO) [Methanococcus
jannaschii]
Length = 279
Score = 156 bits (391), Expect = 3e-37
Identities = 88/229 (38%), Positives = 145/229 (62%), Gaps = 10/229 (4%)
Query: 1 MYAIEVENLVKKYGDFTAV-KGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGK 59
MY +E ++L +Y D TAV KGI+FKVKKGE+ + LGPNGAGK+T +L+PT G+
Sbjct: 1 MYIVETKDLYFRYPDGTAVLKGINFKVKKGEMVSLLGPNGAGKSTLFLHFNGILRPTKGE 60
Query: 60 AIVAGHDVVKEPQ---EVRKKIGIVFQDPSLDREL---TAYENMYIHGMIYGLKGRELKE 113
++ G + + + EVRK +G+VFQ+P D ++ T E++ + GL E+++
Sbjct: 61 VLIKGKPIKYDKKSLVEVRKTVGLVFQNP--DDQIFAPTVKEDVAFGPLNLGLPKEEVEK 118
Query: 114 KIEELLKFVELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHI 173
+++E LK V + F+++P + SGG ++R+ IA L +PE++ LDEPT GLDP + I
Sbjct: 119 RVKEALKAVGMEGFENKPPHHLSGGQKKRVAIAGILAMQPEVIVLDEPTAGLDPVGASKI 178
Query: 174 WEYIRTMKEEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEEL 222
+ + + ++ MTI ++TH +D AD++ ++ GKI+ EGT +E+
Sbjct: 179 MKLLYDLNKK-GMTIIISTHDVDLVPVYADKVYVMYDGKILKEGTPKEV 226
>gi|11498626 ABC transporter, ATP-binding protein [Archaeoglobus fulgidus]
>gi|7445710|pir||E69377 ABC transporter, ATP-binding
protein homolog - Archaeoglobus fulgidus
>gi|2649574|gb|AAB90222.1| (AE001033) ABC transporter,
ATP-binding protein [Archaeoglobus fulgidus]
Length = 275
Score = 156 bits (391), Expect = 3e-37
Identities = 101/307 (32%), Positives = 163/307 (52%), Gaps = 40/307 (13%)
Query: 4 IEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAIVA 63
+EV NL K+YG F AVKGISF V++GE+ +G NGAGK+TT+ +L L++P G+
Sbjct: 2 LEVRNLFKRYGSFEAVKGISFSVRRGEVLGLIGENGAGKSTTLKILAGLIRPDGGEVRYF 61
Query: 64 GHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKFVE 123
G D +E+++ IG + + +L +T E + + IY +++ I+ LL+ +
Sbjct: 62 GKDF---DEEMKRIIGYLPEIDALYDNMTVSEYLNLFADIY-----DVRADIDGLLERLN 113
Query: 124 LWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMKEE 183
L D+ + S GM+R++ IAR L+H+PE+L DEPT GLDP T I E +R + E
Sbjct: 114 L---PDKYISDLSKGMRRKVSIARTLLHDPEVLVYDEPTGGLDPTTSLSIAELLRELAER 170
Query: 184 HEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVGNDIIY---LKLESPKE 240
++ +F + H M E++AD++ ++ GK + G+ EE L+G + IY ++ KE
Sbjct: 171 GKIIVF-SAHNMYYVERIADKVVVMKGGKALYFGSLEE---LIGQNTIYKVEYTIDGRKE 226
Query: 241 ELKCLKADFIRGCKLLPDGRVRIDVENATEALPKLFELAQKNNVKILEVTYHRPTLNDVF 300
+K + E L E +K KI+E+ P L +V+
Sbjct: 227 SVKLFE----------------------VEELLDFAEKVRKQGGKIIEIEREVPRLENVY 264
Query: 301 LHLTGRE 307
L GR+
Sbjct: 265 FSLIGRK 271
>gb|AAK41557.1| Antibiotic ABC transporter, ATP binding protein [Sulfolobus
solfataricus]
Length = 297
Score = 155 bits (389), Expect = 5e-37
Identities = 84/250 (33%), Positives = 147/250 (58%), Gaps = 6/250 (2%)
Query: 4 IEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAIVA 63
I V N+VKKYG+ A+ +S +VKK E + +GPNGAGKTT + +L TL+KP G+ +
Sbjct: 2 IVVSNIVKKYGNKIALDNVSLEVKKREFVSLIGPNGAGKTTLIRILLTLMKPDRGEVQIL 61
Query: 64 GHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKFVE 123
G + K + + K++G V + P+ LT + + + I G+ K ++ +L+FVE
Sbjct: 62 GENPFKS-KRIFKEVGYVQEIPNYPPFLTGKQVLELSAKIRGVD----KSEVNRVLEFVE 116
Query: 124 LWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMKEE 183
+ + + P+ +S GM +R+ IA AL+ P IL +DEP +G+DP E + +K +
Sbjct: 117 MENYANNPIVKYSKGMVQRIAIAEALLGNPSILIMDEPNMGIDPIFSLKTRELLNKLKRK 176
Query: 184 HEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEEL-KKLVGNDIIYLKLESPKEEL 242
++I +T+H +++ ++L+DRI +I GKI+ GT E++ K+ +G ++ E K E
Sbjct: 177 DNVSILMTSHELEDVKKLSDRIFMIYKGKIVFSGTVEDMVKEFLGIQVVVETDEIEKAEG 236
Query: 243 KCLKADFIRG 252
++++G
Sbjct: 237 VLKGIEYVKG 246
>gb|AAK42130.1| Antibiotic ABC transporter ATP binding protein [Sulfolobus
solfataricus]
Length = 297
Score = 155 bits (388), Expect = 6e-37
Identities = 86/252 (34%), Positives = 154/252 (60%), Gaps = 10/252 (3%)
Query: 4 IEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAIVA 63
I V ++VKKYG+ A+ IS +VKKGE + +GPNGAGKTT + +L TL+KP G+ +
Sbjct: 2 IVVSSIVKKYGNKIALDNISLEVKKGEFVSLIGPNGAGKTTLIRILLTLMKPDKGEVQIL 61
Query: 64 GHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKFVE 123
G + + + + K IG V + P+ LT + + + I G+ K +++ +L+FVE
Sbjct: 62 GENPFRN-KRIFKAIGYVQEIPNYPPFLTGRQVLELSAKIRGVD----KSEVKRVLEFVE 116
Query: 124 LWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMKEE 183
+ + + P+ +S GM +R+ IA +L+ P IL +DEP +G+DP E + +K +
Sbjct: 117 MENYANSPIIKYSKGMVQRIAIAESLLGNPSILIMDEPNMGIDPIFSLKTRELLNKLKRK 176
Query: 184 HEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEE-LKKLVGNDIIYL--KLESPKE 240
++I +T+H +++ ++L+DRI +I GKI+ GT E+ +K+ +G +I ++E+ +E
Sbjct: 177 DNVSILMTSHELEDVKKLSDRIFMIYKGKIVFSGTVEDMIKEFLGIQVIVETDEIENAEE 236
Query: 241 ELKCLKADFIRG 252
LK + ++++G
Sbjct: 237 ALKGI--EYVKG 246
>sp|P41234|ABC2_MOUSE ATP-BINDING CASSETTE TRANSPORTER 2 >gi|1082239|pir||B54774 ATP
binding cassette transporter ABC2 - mouse (fragment)
>gi|495259|emb|CAA53531.1| (X75927) abc2 [Mus musculus]
Length = 1472
Score = 155 bits (388), Expect = 6e-37
Identities = 85/220 (38%), Positives = 133/220 (59%), Gaps = 4/220 (1%)
Query: 6 VENLVKKYGDFT--AVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAIVA 63
V+ L K Y + A+ +S + + ++ +FLG NGAGKTTT+ +LT L PTSG A +
Sbjct: 29 VDKLTKVYKNDKKLALNKLSLNLYENQVVSFLGHNGAGKTTTMSILTGLFPPTSGSATIY 88
Query: 64 GHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKFVE 123
GHD+ E E+RK +G+ Q L LT E+++ + + + E++++ +++++ +E
Sbjct: 89 GHDIRTEMDEIRKNLGMCPQHNVLFDRLTVEEHLWFYSRLKSMAQEEIRKETDKMIEDLE 148
Query: 124 LWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMKEE 183
L + V+ SGGM+R+L +A A + + LDEPT G+DP R IW+ I +K +
Sbjct: 149 LSNKRHSLVQTLSGGMKRKLSVAIAFVGGSRAIILDEPTAGVDPYARRAIWDLI--LKYK 206
Query: 184 HEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELK 223
TI L+TH+MDEA+ L DRIAII HGK+ G+ LK
Sbjct: 207 PGRTILLSTHHMDEADLLGDRIAIISHGKLKCCGSPLFLK 246
Score = 134 bits (334), Expect = 1e-30
Identities = 95/329 (28%), Positives = 172/329 (51%), Gaps = 20/329 (6%)
Query: 4 IEVENLVKKY-----GDFTAVKGISFKV-KKGEIFAFLGPNGAGKTTTVHVLTTLLKPTS 57
+++ENL K Y G AV + V GE F LG NGAGKT+T +LT T
Sbjct: 1088 VKIENLTKVYKSRKIGRILAVDRLCLGVCVPGECFGLLGVNGAGKTSTFKMLTGDESTTG 1147
Query: 58 GKAIVAGHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEE 117
G+A V GH V+K+ +V++ +G Q ELTA E++ ++ + + ++ + ++
Sbjct: 1148 GEAFVNGHSVLKDLLQVQQSLGYCPQFDVPVDELTAREHLQLYTRLRCIPWKDEAQVVKW 1207
Query: 118 LLKFVELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYI 177
L+ +EL ++ D+P +SGG +R+L A ALI P +FLDEPT G+DP+ R +W I
Sbjct: 1208 ALEKLELTKYADKPAGTYSGGNKRKLSTAIALIGYPAFIFLDEPTTGMDPKARRFLWNLI 1267
Query: 178 RTMKEEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVGNDIIYLKLES 237
+ + ++ LT+H M+E E L R+AI+ +G++ G+ + LK G+ +
Sbjct: 1268 LDLIKTGR-SVVLTSHSMEECEALCTRLAIMVNGRLHCLGSIQHLKNRFGDGYMITVRTK 1326
Query: 238 PKEELKCLKADFIRGCKLLPDG--------RVRIDVENATEALPKLFELAQK--NNVKIL 287
+ +K + F R P+ +V+ +++ +L ++F ++ + I
Sbjct: 1327 SSQNVKDVVRFFNRN---FPEAHAQGKTPYKVQYQLKSEHISLAQVFSKMEQVVGVLGIE 1383
Query: 288 EVTYHRPTLNDVFLHLTGREIRDEEGGES 316
+ + + TL++VF++ ++ + E E+
Sbjct: 1384 DYSVSQTTLDNVFVNFAKKQSDNVEQQEA 1412
>pir||E70871 hypothetical protein Rv1458c - Mycobacterium tuberculosis (strain
H37RV) >gi|2791392|emb|CAA15988.1| (AL021184)
hypothetical protein Rv1458c [Mycobacterium
tuberculosis]
Length = 313
Score = 155 bits (387), Expect = 8e-37
Identities = 99/308 (32%), Positives = 156/308 (50%), Gaps = 9/308 (2%)
Query: 4 IEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAIVA 63
+ + + K+YG TAV + V E+ A LGPNGAGKTTTV + ++P +G V
Sbjct: 12 LRLRGVCKRYGSITAVSNLDLDVHDAEVMALLGPNGAGKTTTVEMCEGFVRPDAGSIEVL 71
Query: 64 GHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKFVE 123
G D + + +R +IG++ Q A E + ++ L LL +
Sbjct: 72 GLDPITDNARLRARIGVMLQGGGGYPAARAGEML---DLVASYAANPLDP--HWLLDTLG 126
Query: 124 LWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMKEE 183
L + SGG Q+RL +A AL+ P+++FLDEPT G+D R +WE I ++ +
Sbjct: 127 LTEAARTTYRRLSGGQQQRLALACALVGRPQLVFLDEPTAGMDAHARVLVWELIDALRRD 186
Query: 184 HEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVGNDIIYLKLESPKEELK 243
+T+ LTTH++ EAE+LADR+ IIDHG +A GT EL + D + P+ +L
Sbjct: 187 -GVTVVLTTHHLKEAEELADRLVIIDHGVTVAAGTPAELMRSGAKDQLRF-TAPPRLDLS 244
Query: 244 CLKADFIRGCKL--LPDGRVRIDVENATEALPKLFELAQKNNVKILEVTYHRPTLNDVFL 301
L + G + L G ++ + L + + +V ++ + +L DVFL
Sbjct: 245 LLASALPEGYQATELTPGEYLVEGPVDPQVLATVTAWCAQIDVLATDMRVEQRSLEDVFL 304
Query: 302 HLTGREIR 309
LTGR++R
Sbjct: 305 DLTGRKLR 312
>gb|AAC72253.1| (U91581) LctF [Lactococcus lactis subsp. lactis]
Length = 306
Score = 155 bits (387), Expect = 8e-37
Identities = 101/303 (33%), Positives = 162/303 (53%), Gaps = 12/303 (3%)
Query: 4 IEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAIVA 63
+E + L KK+G +V+ ++ VKKG+IF FLGPNGAGK+TT+ ++ LL PT G+ V
Sbjct: 7 LETKKLSKKFGKEYSVRNLTISVKKGDIFGFLGPNGAGKSTTMKMILGLLHPTEGEVKVF 66
Query: 64 GHDVVKEPQE-VRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKFV 122
G + + V K +G + ++PS L+ EN+ + + L IE++L V
Sbjct: 67 GKKLDNSVKNSVLKDVGCLIEEPSFYPNLSGLENLKLVQKLLNLP----YHNIEKVLNIV 122
Query: 123 ELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMKE 182
+L K++ VK +S GM++RL IA ALI P++L LDEPT GLDP I E I+++ E
Sbjct: 123 KLEDQKNKLVKNYSLGMKQRLGIALALIKFPKLLILDEPTNGLDPTGIREIRELIKSLPE 182
Query: 183 EHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVGNDIIYLKLESPKEEL 242
++ +T+ +++H + E EQ+A+ +AII G+++ EG EL KL I ++ +
Sbjct: 183 KYGITVLISSHLLSEIEQIANTVAIIKKGELLYEG---ELSKLEEQPIFEIQTNLINQSF 239
Query: 243 KCLKADFIRGCKLLPDGRVRIDVENA-TEALPKLFELAQKNNVKILEVTYHRPTLNDVFL 301
+ L+ G + I + N+ E +KI E L VF+
Sbjct: 240 EVLQG---LGYTVKKQSNDTIQIMNSDLNKRAAAIEALVSQQIKIYEAKSVTKNLEQVFI 296
Query: 302 HLT 304
+T
Sbjct: 297 EMT 299
>pir||C83188 probable ATP-binding component of ABC transporter PA3672 [imported]
- Pseudomonas aeruginosa (strain PAO1)
>gi|9949834|gb|AAG07060.1|AE004786_12 (AE004786)
probable ATP-binding component of ABC transporter
[Pseudomonas aeruginosa]
Length = 307
Score = 155 bits (387), Expect = 8e-37
Identities = 92/303 (30%), Positives = 160/303 (52%), Gaps = 4/303 (1%)
Query: 4 IEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAIVA 63
IE NL K++G AV +SF+V+ GE+ FLGPNGAGK+TT+ +LT L P +G A +
Sbjct: 2 IETRNLGKRFGSRVAVDDLSFQVETGEVLGFLGPNGAGKSTTMKMLTGFLAPCAGTASIF 61
Query: 64 GHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKFVE 123
G D+ + ++ IG + + E+T + I G +G +E++ L +E
Sbjct: 62 GFDIRNRTLQAQRLIGYLPEGSPCYAEMTVQGFLDFIAEIRGYRGAGKRERVARALGLLE 121
Query: 124 LWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMKEE 183
L + + ++ S G +RR+ +A+A++HEP L LDEPT GLDP + + E IR + +E
Sbjct: 122 LDEVRRQTIETLSKGFRRRVGLAQAILHEPRALVLDEPTDGLDPNQKHQVRELIRGLAQE 181
Query: 184 HEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEEL-KKLVGNDIIYLKLESPKEEL 242
+ ++TH ++E L R +I G+++A+ T EL + + + L + P + +
Sbjct: 182 R--IVIISTHILEEVSALCSRALVIGGGRLLADSTPLELASRSRYHQAVTLYSDEPLDAV 239
Query: 243 KCLKADFIRGCKLLP-DGRVRIDVENATEALPKLFELAQKNNVKILEVTYHRPTLNDVFL 301
+ G + P +G + + + P++ L + +I E+ R L++VF
Sbjct: 240 ALAVLPGVAGIEENPAEGSLTVLAQPGAVIFPQVSGLVAERGWRIRELDVERGRLDEVFR 299
Query: 302 HLT 304
+LT
Sbjct: 300 NLT 302
>pir||T33783 hypothetical protein Y39D8C.1 - Caenorhabditis elegans
>gi|3806158|gb|AAC69223.1| (AF101313) similar to the
ATP-binding transport protein family (ABC transporter)
(Pfam: ABC_tran.hmm, score: 162.68 and 139.46)
[Caenorhabditis elegans]
Length = 1802
Score = 154 bits (385), Expect = 1e-36
Identities = 93/309 (30%), Positives = 162/309 (52%), Gaps = 8/309 (2%)
Query: 3 AIEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAIV 62
A+ NLVK YG+F AVKG++F V + F LG NGAGKT+T +LT +SG A V
Sbjct: 1449 ALVSNNLVKWYGNFNAVKGVNFHVNSKDCFGLLGVNGAGKTSTFQMLTGENSISSGDAYV 1508
Query: 63 AGHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKFV 122
G V +E G Q ++ +E++ E +Y+ I G+ +++ +K+ ++ +
Sbjct: 1509 NGWSVKNNWREAGANTGYCPQYDAIIKEMSGEETLYMFARIRGIPEKDIPKKVNAVIHAI 1568
Query: 123 ELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMKE 182
+ + R +K +SGG +RRL + A++ P++L LDEPT G+DP+ R IW + ++
Sbjct: 1569 GIGMYASRQIKTYSGGNKRRLSLGIAIVGLPDVLLLDEPTSGVDPKARRIIWNILNRLR- 1627
Query: 183 EHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVGND---IIYLKLESPK 239
+ + LT+H MDE E L +AI+ +GK G+ + +K G+ +I LK +
Sbjct: 1628 DLGTALVLTSHSMDECEALCTELAIMVYGKFRCYGSCQHIKSRYGSGYTLLIRLKNRNDA 1687
Query: 240 EELKCLKADFIRGCKLLPDG--RVRIDVENATEALPKLFELAQKNNVKIL--EVTYHRPT 295
E+ K RG + + ++ D+ ++ +LFE + + + + + + T
Sbjct: 1688 EKTKSTIKQTFRGSVIKEEHVLQLNFDIPRDGDSWSRLFEKLETVSTSLNWDDYSLSQTT 1747
Query: 296 LNDVFLHLT 304
L VF+ +
Sbjct: 1748 LEQVFIEFS 1756
Score = 124 bits (308), Expect = 2e-27
Identities = 79/218 (36%), Positives = 121/218 (55%), Gaps = 6/218 (2%)
Query: 12 KYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAIVAGHDVVKEP 71
K G+ AV ++ K+ G+ LG NGAGK+TT +LT + P+SG A V D+
Sbjct: 608 KSGEKRAVSNLNLKMYPGQCTVLLGHNGAGKSTTFSMLTGVASPSSGSAYVNDFDIRTSL 667
Query: 72 QEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGREL-KEKIEELLKFVELWRFKDR 130
++R+++G+ Q +L +T E++ LK R E+ E+L + + D
Sbjct: 668 PKIRREMGLCPQYNTLFGFMTVMEHLEFFAK---LKERTWDPEEAREILARLRIDFKADF 724
Query: 131 PVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMKEEHEMTIFL 190
SGG +R+L +A ALI E++ LDEPT G+DP R W I+ +E+ TI L
Sbjct: 725 MAGALSGGQKRKLSLAIALIGGSEVVMLDEPTSGMDPGARHETWTLIQ--REKERRTILL 782
Query: 191 TTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVGN 228
TTH+M+EA+ L DRIAI+ HG++ G+ LK+ G+
Sbjct: 783 TTHFMEEADLLGDRIAIMAHGQLECCGSPMFLKQQYGD 820
>pir||T27121 hypothetical protein Y53C10A.9 - Caenorhabditis elegans
>gi|3947655|emb|CAA22142.1| (AL033536) predicted using
Genefinder~contains similarity to Pfam domain: PF00005
(ABC transporter), Score=319.4, E-value=1.4e-92, N=2~cDNA
EST yk93b1.5 comes from this gene~cDNA EST yk208d6.3
comes from this gene~cDNA EST yk208d6.5 comes from this
gene
Length = 1564
Score = 154 bits (385), Expect = 1e-36
Identities = 104/322 (32%), Positives = 166/322 (51%), Gaps = 28/322 (8%)
Query: 6 VENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAIVAGH 65
++ LVK +G F AV +S V E F LG NGAGKTTT ++T L PT G A + GH
Sbjct: 1252 IDGLVKDFGKFRAVNDLSISVGHEECFGMLGANGAGKTTTFDIITGLTMPTGGSATIDGH 1311
Query: 66 DVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKFVELW 125
D+ + IG Q ++ ++++ + + I + G +KE +E +L V +
Sbjct: 1312 DITETIH-----IGYCPQFDAMLQQISCRQTLRIMAKLQGYPN--VKEVVELVLDCVGMS 1364
Query: 126 RFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMKEEHE 185
F + VK SGG +R++ + AL+ + LDEPT G+DP+ R IW+ I M+E+ +
Sbjct: 1365 DFGYKLVKNCSGGQKRKISVGIALMSRATCIILDEPTAGIDPRARREIWDIIHEMREQAK 1424
Query: 186 MTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVGNDIIYLKLESPKEELKCL 245
+I LT+H M+E E L RI I+ G++IA GTS+ LK GN + + + E+L+ +
Sbjct: 1425 CSIVLTSHSMEECEALCTRIGILRKGEMIALGTSQSLKSQYGNTYMMTLILNSLEDLESV 1484
Query: 246 KADFIRGCKLLPDGRVRIDVENATEA----LPK------------LFELAQKNNVKILEV 289
+ + +PD ++ + T + LPK + LA+K N K +
Sbjct: 1485 ---CVIVSEEMPDAVLKTPESSLTTSIVWELPKSKSDKWSEKYNQVEVLAKKANAKDYML 1541
Query: 290 TYHRPTLNDVFLHLTGREIRDE 311
T + +L D F+ L E +E
Sbjct: 1542 T--QASLEDTFIRLITTEEEEE 1561
Score = 146 bits (365), Expect = 3e-34
Identities = 98/306 (32%), Positives = 156/306 (50%), Gaps = 21/306 (6%)
Query: 4 IEVENLVKKYGDFT-AVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAIV 62
IE+ LVK Y + AV G+S + +G++ LG NG GK+TT ++T + + T GK ++
Sbjct: 451 IELSGLVKVYQNGEKAVNGLSLRAIRGQVSILLGHNGCGKSTTFGMITGMHQATEGKVMI 510
Query: 63 AGHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLK-GRELKEKIEELLKF 121
G D E R+ IG Q + ELT +E++ + + G G + K E LLK
Sbjct: 511 GGIDANANRAEARELIGYCPQYNPIYDELTVWEHLRLVNALKGRSGGSDFKMDAESLLKQ 570
Query: 122 VELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMK 181
+EL ++ K SGGM+R+L + A+I ++ LDEPT G+DP R + + +K
Sbjct: 571 IELTDKRNTLAKNLSGGMKRKLCVCMAMIGGSRVILLDEPTAGMDPSARIDVQNMLALVK 630
Query: 182 EEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVGN----DIIYLKLES 237
+ TI LTTHYMDEAE+L D I ++ HGK+ A G+ LK+ G +++ +
Sbjct: 631 ADR--TILLTTHYMDEAEKLGDWIFVMSHGKMAASGSKHYLKQKYGGGMLLTLVFKSVHD 688
Query: 238 PKEELKCLKADF-----IRGCKLLPDGR---VRIDV-ENATEALPKLFELAQKNNVKILE 288
P K + + + L+ D R + I + E LP L ++ + ++E
Sbjct: 689 PMRPRKSYETAYDVCKTVCSTALVKDERGQMIEISILETEKSRLPTLLKILE----SVME 744
Query: 289 VTYHRP 294
Y+ P
Sbjct: 745 EDYNNP 750
>pir||S72783 probable ABC-type transport protein B1496_F3_97 - Mycobacterium
leprae >gi|466902|gb|AAA17147.1| (U00013) abc2;
B1496_F3_97 [Mycobacterium leprae]
>gi|2398710|emb|CAB16175.1| (Z99125) ABC-type
transporter [Mycobacterium leprae]
Length = 315
Score = 153 bits (383), Expect = 2e-36
Identities = 102/308 (33%), Positives = 152/308 (49%), Gaps = 9/308 (2%)
Query: 4 IEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAIVA 63
I + + K YG AV + + E+ A LGPNGAGKTTTV + ++P +G V
Sbjct: 15 IRLRGVCKHYGSILAVSNLDLDIHSAEVLALLGPNGAGKTTTVEMCEGFVRPDAGTIEVL 74
Query: 64 GHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKFVE 123
G D + + +R +IG++ Q A E + ++ L E LL+ +
Sbjct: 75 GLDPITDNARLRARIGVMLQGGGGYPAARAGEML---NLVASYAADPLDP--EWLLETLG 129
Query: 124 LWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMKEE 183
L + SGG Q+RL +A L+ PE++FLDEPT G+D R +WE I T++ +
Sbjct: 130 LTDVARTTYRRLSGGQQQRLALACTLVGRPELVFLDEPTAGMDTHARLLVWELIDTLRRD 189
Query: 184 HEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVGNDIIYLKLESPKEELK 243
+T+ LTTH + EAE+LADR+ IIDHG++IA GT EL D + P+ +L
Sbjct: 190 -GVTVVLTTHQLKEAEELADRLVIIDHGRMIAAGTPTELMHTGAKDQLRFS-APPRLDLS 247
Query: 244 CLKADFIRGCKL--LPDGRVRIDVENATEALPKLFELAQKNNVKILEVTYHRPTLNDVFL 301
L K L G + + L + + NV + + +L DVFL
Sbjct: 248 LLAFALPEDYKTTELTPGEYLVAGPIDPQVLATVTAWCAQINVLTTNMRVEQHSLEDVFL 307
Query: 302 HLTGREIR 309
LTGR++R
Sbjct: 308 DLTGRKLR 315
>pir||T09008 cdd4-like protein ScnF - Streptococcus pyogenes
>gi|2502072|gb|AAB92604.1| (AF026542) ScnF
[Streptococcus pyogenes]
Length = 299
Score = 153 bits (383), Expect = 2e-36
Identities = 88/223 (39%), Positives = 132/223 (58%), Gaps = 7/223 (3%)
Query: 3 AIEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAIV 62
AIE+ L K Y D T V V++GEI+ FLGPNGAGKTTT+ ++ +L+ PT G+ ++
Sbjct: 4 AIELRKLSKVYQDITTVDLEKITVREGEIYGFLGPNGAGKTTTMKMILSLVSPTLGEILI 63
Query: 63 AGHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKFV 122
G D+ K + IG + ++PS LT YEN+ + + G + I L V
Sbjct: 64 NGEDI-KGNHAYLRVIGSMIEEPSYYPNLTGYENLLVFQKMVGFD----ESNIWPTLALV 118
Query: 123 ELWRFKDRP--VKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTM 180
L +R VK +S GM++RL +A AL+ +P+IL LDEPT GLDP I E I +
Sbjct: 119 GLAEENNRKKLVKAYSLGMKQRLALAFALVKKPKILLLDEPTNGLDPAGIHEIRELIVKL 178
Query: 181 KEEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELK 223
+E +T+F+++ + E E +ADR+ II+HG+++ EG E +K
Sbjct: 179 AKEKGLTVFISSQILSEIEHIADRVGIINHGRLVYEGEIEAIK 221
>gb|AAC23915.1| (AF000148) ATP-binding cassette transporter [Homo sapiens]
Length = 2273
Score = 153 bits (383), Expect = 2e-36
Identities = 90/232 (38%), Positives = 133/232 (56%), Gaps = 5/232 (2%)
Query: 6 VENLVKKY--GDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAIVA 63
V+NLVK + AV ++ + +I AFLG NGAGKTTT+ +LT LL PTSG +V
Sbjct: 931 VKNLVKIFEPSGRPAVDRLNITFYENQITAFLGHNGAGKTTTLSILTGLLPPTSGTVLVG 990
Query: 64 GHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKFVE 123
G D+ VR+ +G+ Q L LT E+M + + G E + ++E +L+
Sbjct: 991 GRDIETSLDAVRQSLGMCPQHNILFHHLTVAEHMLFYAQLKGKSQEEAQLEMEAMLEDTG 1050
Query: 124 LWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMKEE 183
L ++ + SGGMQR+L +A A + + +++ LDEPT G+DP +R IW+ + +K
Sbjct: 1051 LHHKRNEEAQDLSGGMQRKLSVAIAFVGDAKVVILDEPTSGVDPYSRRSIWDLL--LKYR 1108
Query: 184 HEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVGNDIIYLKL 235
TI ++TH+MDEA+ L DRIAII G++ GT LK G +YL L
Sbjct: 1109 SGRTIIMSTHHMDEADLLGDRIAIIAQGRLYCSGTPLFLKNCFGTG-LYLTL 1159
Score = 143 bits (356), Expect = 4e-33
Identities = 96/306 (31%), Positives = 162/306 (52%), Gaps = 13/306 (4%)
Query: 18 AVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAIVAGHDVVKEPQEVRKK 77
AV + V+ GE F LG NGAGKTTT +LT TSG A VAG ++ EV +
Sbjct: 1954 AVDRLCVGVRPGECFGLLGVNGAGKTTTFKMLTGDNTVTSGDATVAGKSILTNISEVHQN 2013
Query: 78 IGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKFVELWRFKDRPVKYFSG 137
+G Q ++D LT E++Y++ + G+ E+++ +K + L + D +SG
Sbjct: 2014 MGYCPQFDAIDELLTGREHLYLYARLRGVPAEEIEKVANWSIKSLGLTVYADCLAGTYSG 2073
Query: 138 GMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMKEEHEMTIFLTTHYMDE 197
G +R+L A ALI P ++ LDEPT G+DPQ R +W I ++ E + LT+H M+E
Sbjct: 2074 GNKRKLSTAIALIGCPPLVLLDEPTTGMDPQARRMLWNVIVSIIREGR-AVVLTSHSMEE 2132
Query: 198 AEQLADRIAIIDHGKIIAEGTSEELKKLVGND-IIYLKLESPKEEL--------KCLKAD 248
E L R+AI+ G GT + LK G+ I+ +K++SPK++L + + +
Sbjct: 2133 CEALCTRLAIMVKGAFRCMGTIQHLKSKFGDGYIVTMKIKSPKDDLLPDLNPVEQFFQGN 2192
Query: 249 FIRGCKLLPDGRVRIDVENATEALPKLFE--LAQKNNVKILEVTYHRPTLNDVFLHLTGR 306
F G + + ++ +L ++F+ L+ K+++ I E + + TL+ VF++ +
Sbjct: 2193 F-PGSVQRERHYNMLQFQVSSSSLARIFQLLLSHKDSLLIEEYSVTQTTLDQVFVNFAKQ 2251
Query: 307 EIRDEE 312
+ +
Sbjct: 2252 QTESHD 2257
>dbj|BAB04167.1| (AP001508) ABC transporter (ATP-binding protein) [Bacillus
halodurans]
Length = 307
Score = 153 bits (383), Expect = 2e-36
Identities = 93/304 (30%), Positives = 160/304 (52%), Gaps = 7/304 (2%)
Query: 4 IEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAIVA 63
IE + L K Y V + V +GE+F FLGPNG+GKTT + +L L+K G +
Sbjct: 3 IEAKGLKKIYNHVPVVDDVDLLVPEGEVFGFLGPNGSGKTTVMRMLLGLVKTDGGDIKIL 62
Query: 64 GHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKFVE 123
G + K + K++G + + P+ L A +N+ I L+ E +IE+ L V
Sbjct: 63 GKSLEKNRLSILKEVGALIETPAYYGHLNAIDNLKIAAT---LRQIEDHSQIEKTLDRVG 119
Query: 124 LWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMKEE 183
L K + VK FS GM++RL IA AL+H+P++L LDEPT GLDP+ + E IR + ++
Sbjct: 120 LTSSKHKKVKSFSLGMKQRLGIAMALLHQPKLLLLDEPTNGLDPEGIQEMRELIRDLPKK 179
Query: 184 HEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVGNDI--IYLKLESPKEE 241
+T+F+++H + E +Q+A ++ +I HG ++ +G +L G ++ + E+
Sbjct: 180 EGVTVFVSSHLLGEIDQVASQVGVIYHGSLLYQGQKNDLLASHGGTTVSVHTPEKDKVEQ 239
Query: 242 LKCLKADFIRGCKLLPDGRVRIDVENATEALPKLFELAQKNNVKILEVTYHRPTLNDVFL 301
L ++ ++ + + I + T+ + + L Q+ ++ V H TL D ++
Sbjct: 240 LLVMEGFHVQKSIRHKEDEIMITGPHVTKEV--IVMLLQREGIQNYYVQEHHRTLEDAYM 297
Query: 302 HLTG 305
L G
Sbjct: 298 ALIG 301
>gb|AAC05632.1| (AF001945) rim ABC transporter [Homo sapiens]
Length = 2273
Score = 153 bits (382), Expect = 3e-36
Identities = 90/232 (38%), Positives = 133/232 (56%), Gaps = 5/232 (2%)
Query: 6 VENLVKKYGDF--TAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAIVA 63
V+NLVK + AV ++ + +I AFLG NGAGKTTT+ +LT LL PTSG +V
Sbjct: 931 VKNLVKIFEPCGRPAVDRLNITFYENQITAFLGHNGAGKTTTLSILTGLLPPTSGTVLVG 990
Query: 64 GHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKFVE 123
G D+ VR+ +G+ Q L LT E+M + + G E + ++E +L+
Sbjct: 991 GRDIETSLDAVRQSLGMCPQHNILFHHLTVAEHMLFYAQLKGKSQEEAQLEMEAMLEDTG 1050
Query: 124 LWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMKEE 183
L ++ + SGGMQR+L +A A + + +++ LDEPT G+DP +R IW+ + +K
Sbjct: 1051 LHHKRNEEAQDLSGGMQRKLSVAIAFVGDAKVVILDEPTSGVDPYSRRSIWDLL--LKYR 1108
Query: 184 HEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVGNDIIYLKL 235
TI ++TH+MDEA+ L DRIAII G++ GT LK G +YL L
Sbjct: 1109 SGRTIIMSTHHMDEADLLGDRIAIIAQGRLYCSGTPLFLKNCFGTG-LYLTL 1159
Score = 143 bits (358), Expect = 2e-33
Identities = 96/306 (31%), Positives = 162/306 (52%), Gaps = 13/306 (4%)
Query: 18 AVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAIVAGHDVVKEPQEVRKK 77
AV + V+ GE F LG NGAGKTTT +LT TSG A VAG ++ EV +
Sbjct: 1954 AVDRLCVGVRPGECFGLLGVNGAGKTTTFKMLTGDTTVTSGDATVAGKSILTNISEVHQN 2013
Query: 78 IGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKFVELWRFKDRPVKYFSG 137
+G Q ++D LT E++Y++ + G+ E+++ +K + L + D +SG
Sbjct: 2014 MGYCPQFDAIDELLTGREHLYLYARLRGVPAEEIEKVANWSIKSLGLTVYADCLAGTYSG 2073
Query: 138 GMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMKEEHEMTIFLTTHYMDE 197
G +R+L A ALI P ++ LDEPT G+DPQ R +W I ++ E + LT+H M+E
Sbjct: 2074 GNKRKLSTAIALIGCPPLVLLDEPTTGMDPQARRMLWNVIVSIIREGR-AVVLTSHSMEE 2132
Query: 198 AEQLADRIAIIDHGKIIAEGTSEELKKLVGND-IIYLKLESPKEEL--------KCLKAD 248
E L R+AI+ G GT + LK G+ I+ +K++SPK++L + + +
Sbjct: 2133 CEALCTRLAIMVKGAFRCMGTIQHLKSKFGDGYIVTMKIKSPKDDLLPDLNPVEQFFQGN 2192
Query: 249 FIRGCKLLPDGRVRIDVENATEALPKLFE--LAQKNNVKILEVTYHRPTLNDVFLHLTGR 306
F G + + ++ +L ++F+ L+ K+++ I E + + TL+ VF++ +
Sbjct: 2193 F-PGSVQRERHYNMLQFQVSSSSLARIFQLLLSHKDSLLIEEYSVTQTTLDQVFVNFAKQ 2251
Query: 307 EIRDEE 312
+ +
Sbjct: 2252 QTESHD 2257
>emb|CAA75729.1| (Y15635) ABCR [Homo sapiens]
Length = 2273
Score = 153 bits (382), Expect = 3e-36
Identities = 90/232 (38%), Positives = 133/232 (56%), Gaps = 5/232 (2%)
Query: 6 VENLVKKYGDF--TAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAIVA 63
V+NLVK + AV ++ + +I AFLG NGAGKTTT+ +LT LL PTSG +V
Sbjct: 931 VKNLVKIFEPCGRPAVDRLNITFYENQITAFLGHNGAGKTTTLSILTGLLPPTSGTVLVG 990
Query: 64 GHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKFVE 123
G D+ VR+ +G+ Q L LT E+M + + G E + ++E +L+
Sbjct: 991 GRDIETSLDAVRQSLGMCPQHNILFHHLTVAEHMLFYAQLKGKSQEEAQLEMEAMLEDTG 1050
Query: 124 LWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMKEE 183
L ++ + SGGMQR+L +A A + + +++ LDEPT G+DP +R IW+ + +K
Sbjct: 1051 LHHKRNEEAQDLSGGMQRKLSVAIAFVGDAKVVILDEPTSGVDPYSRRSIWDLL--LKYR 1108
Query: 184 HEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVGNDIIYLKL 235
TI ++TH+MDEA+ L DRIAII G++ GT LK G +YL L
Sbjct: 1109 SGRTIIMSTHHMDEADLLGDRIAIIAQGRLYCSGTPLFLKNCFGTG-LYLTL 1159
Score = 143 bits (358), Expect = 2e-33
Identities = 96/306 (31%), Positives = 162/306 (52%), Gaps = 13/306 (4%)
Query: 18 AVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAIVAGHDVVKEPQEVRKK 77
AV + V+ GE F LG NGAGKTTT +LT TSG A VAG ++ EV +
Sbjct: 1954 AVDRLCVGVRPGECFGLLGVNGAGKTTTFKMLTGDTTVTSGDATVAGKSILTNISEVHQN 2013
Query: 78 IGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKFVELWRFKDRPVKYFSG 137
+G Q ++D LT E++Y++ + G+ E+++ +K + L + D +SG
Sbjct: 2014 MGYCPQFDAIDELLTGREHLYLYARLRGVPAEEIEKVANWSIKSLGLTVYADCLAGTYSG 2073
Query: 138 GMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMKEEHEMTIFLTTHYMDE 197
G +R+L A ALI P ++ LDEPT G+DPQ R +W I ++ E + LT+H M+E
Sbjct: 2074 GNKRKLSTAIALIGCPPLVLLDEPTTGMDPQARRMLWNVIVSIIREGR-AVVLTSHSMEE 2132
Query: 198 AEQLADRIAIIDHGKIIAEGTSEELKKLVGND-IIYLKLESPKEEL--------KCLKAD 248
E L R+AI+ G GT + LK G+ I+ +K++SPK++L + + +
Sbjct: 2133 CEALCTRLAIMVKGAFRCMGTIQHLKSKFGDGYIVTMKIKSPKDDLLPDLNPVEQFFQGN 2192
Query: 249 FIRGCKLLPDGRVRIDVENATEALPKLFE--LAQKNNVKILEVTYHRPTLNDVFLHLTGR 306
F G + + ++ +L ++F+ L+ K+++ I E + + TL+ VF++ +
Sbjct: 2193 F-PGSVQRERHYNMLQFQVSSSSLARIFQLLLSHKDSLLIEEYSVTQTTLDQVFVNFAKQ 2251
Query: 307 EIRDEE 312
+ +
Sbjct: 2252 QTESHD 2257
>sp|P78363|ABCR_HUMAN RETINAL-SPECIFIC ATP-BINDING CASSETTE TRANSPORTER (RIM ABC
TRANSPORTER) (RIM PROTEIN) (RMP) (STARGARDT DISEASE
PROTEIN)
Length = 2273
Score = 153 bits (382), Expect = 3e-36
Identities = 90/232 (38%), Positives = 133/232 (56%), Gaps = 5/232 (2%)
Query: 6 VENLVKKYGDF--TAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAIVA 63
V+NLVK + AV ++ + +I AFLG NGAGKTTT+ +LT LL PTSG +V
Sbjct: 931 VKNLVKIFEPCGRPAVDRLNITFYENQITAFLGHNGAGKTTTLSILTGLLPPTSGTVLVG 990
Query: 64 GHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKFVE 123
G D+ VR+ +G+ Q L LT E+M + + G E + ++E +L+
Sbjct: 991 GRDIETSLDAVRQSLGMCPQHNILFHHLTVAEHMLFYAQLKGKSQEEAQLEMEAMLEDTG 1050
Query: 124 LWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMKEE 183
L ++ + SGGMQR+L +A A + + +++ LDEPT G+DP +R IW+ + +K
Sbjct: 1051 LHHKRNEEAQDLSGGMQRKLSVAIAFVGDAKVVILDEPTSGVDPYSRRSIWDLL--LKYR 1108
Query: 184 HEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVGNDIIYLKL 235
TI ++TH+MDEA+ L DRIAII G++ GT LK G +YL L
Sbjct: 1109 SGRTIIMSTHHMDEADLLGDRIAIIAQGRLYCSGTPLFLKNCFGTG-LYLTL 1159
Score = 143 bits (358), Expect = 2e-33
Identities = 96/306 (31%), Positives = 162/306 (52%), Gaps = 13/306 (4%)
Query: 18 AVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAIVAGHDVVKEPQEVRKK 77
AV + V+ GE F LG NGAGKTTT +LT TSG A VAG ++ EV +
Sbjct: 1954 AVDRLCVGVRPGECFGLLGVNGAGKTTTFKMLTGDTTVTSGDATVAGKSILTNISEVHQN 2013
Query: 78 IGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKFVELWRFKDRPVKYFSG 137
+G Q ++D LT E++Y++ + G+ E+++ +K + L + D +SG
Sbjct: 2014 MGYCPQFDAIDELLTGREHLYLYARLRGVPAEEIEKVANWSIKSLGLTVYADCLAGTYSG 2073
Query: 138 GMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMKEEHEMTIFLTTHYMDE 197
G +R+L A ALI P ++ LDEPT G+DPQ R +W I ++ E + LT+H M+E
Sbjct: 2074 GNKRKLSTAIALIGCPPLVLLDEPTTGMDPQARRMLWNVIVSIIREGR-AVVLTSHSMEE 2132
Query: 198 AEQLADRIAIIDHGKIIAEGTSEELKKLVGND-IIYLKLESPKEEL--------KCLKAD 248
E L R+AI+ G GT + LK G+ I+ +K++SPK++L + + +
Sbjct: 2133 CEALCTRLAIMVKGAFRCMGTIQHLKSKFGDGYIVTMKIKSPKDDLLPDLNPVEQFFQGN 2192
Query: 249 FIRGCKLLPDGRVRIDVENATEALPKLFE--LAQKNNVKILEVTYHRPTLNDVFLHLTGR 306
F G + + ++ +L ++F+ L+ K+++ I E + + TL+ VF++ +
Sbjct: 2193 F-PGSVQRERHYNMLQFQVSSSSLARIFQLLLSHKDSLLIEEYSVTQTTLDQVFVNFAKQ 2251
Query: 307 EIRDEE 312
+ +
Sbjct: 2252 QTESHD 2257
>gi|11421340 ATP-binding cassette, sub-family A member 4 [Homo sapiens]
Length = 2300
Score = 153 bits (382), Expect = 3e-36
Identities = 90/232 (38%), Positives = 133/232 (56%), Gaps = 5/232 (2%)
Query: 6 VENLVKKYGDF--TAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAIVA 63
V+NLVK + AV ++ + +I AFLG NGAGKTTT+ +LT LL PTSG +V
Sbjct: 958 VKNLVKIFEPCGRPAVDRLNITFYENQITAFLGHNGAGKTTTLSILTGLLPPTSGTVLVG 1017
Query: 64 GHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKFVE 123
G D+ VR+ +G+ Q L LT E+M + + G E + ++E +L+
Sbjct: 1018 GRDIETSLDAVRQSLGMCPQHNILFHHLTVAEHMLFYAQLKGKSQEEAQLEMEAMLEDTG 1077
Query: 124 LWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMKEE 183
L ++ + SGGMQR+L +A A + + +++ LDEPT G+DP +R IW+ + +K
Sbjct: 1078 LHHKRNEEAQDLSGGMQRKLSVAIAFVGDAKVVILDEPTSGVDPYSRRSIWDLL--LKYR 1135
Query: 184 HEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVGNDIIYLKL 235
TI ++TH+MDEA+ L DRIAII G++ GT LK G +YL L
Sbjct: 1136 SGRTIIMSTHHMDEADLLGDRIAIIAQGRLYCSGTPLFLKNCFGTG-LYLTL 1186
Score = 143 bits (358), Expect = 2e-33
Identities = 96/306 (31%), Positives = 162/306 (52%), Gaps = 13/306 (4%)
Query: 18 AVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAIVAGHDVVKEPQEVRKK 77
AV + V+ GE F LG NGAGKTTT +LT TSG A VAG ++ EV +
Sbjct: 1981 AVDRLCVGVRPGECFGLLGVNGAGKTTTFKMLTGDTTVTSGDATVAGKSILANISEVHQN 2040
Query: 78 IGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKFVELWRFKDRPVKYFSG 137
+G Q ++D LT E++Y++ + G+ E+++ +K + L + D +SG
Sbjct: 2041 MGYCPQFDAIDELLTGREHLYLYARLRGVPAEEIEKVANWSIKSLGLTVYADCLAGTYSG 2100
Query: 138 GMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMKEEHEMTIFLTTHYMDE 197
G +R+L A ALI P ++ LDEPT G+DPQ R +W I ++ E + LT+H M+E
Sbjct: 2101 GNKRKLSTAIALIGCPPLVLLDEPTTGMDPQARRMLWNVIVSIIREGR-AVVLTSHSMEE 2159
Query: 198 AEQLADRIAIIDHGKIIAEGTSEELKKLVGND-IIYLKLESPKEEL--------KCLKAD 248
E L R+AI+ G GT + LK G+ I+ +K++SPK++L + + +
Sbjct: 2160 CEALCTRLAIMVKGAFRCMGTIQHLKSKFGDGYIVTMKIKSPKDDLLPDLNPVEQFFQGN 2219
Query: 249 FIRGCKLLPDGRVRIDVENATEALPKLFE--LAQKNNVKILEVTYHRPTLNDVFLHLTGR 306
F G + + ++ +L ++F+ L+ K+++ I E + + TL+ VF++ +
Sbjct: 2220 F-PGSVQRERHYNMLQFQVSSSSLARIFQLLLSHKDSLLIEEYSVTQTTLDQVFVNFAKQ 2278
Query: 307 EIRDEE 312
+ +
Sbjct: 2279 QTESHD 2284
>gb|AAG35594.1|AF200948_1 (AF200948) ABC1 transporter [Leishmania tropica]
Length = 1843
Score = 152 bits (381), Expect = 4e-36
Identities = 103/325 (31%), Positives = 167/325 (50%), Gaps = 24/325 (7%)
Query: 4 IEVENLVKKYGDF-TAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAIV 62
+ V NL K+Y + AV+ I+ V+ GE+F FLG NGAGKTTT+ +L PTSG+A V
Sbjct: 1505 VRVLNLRKEYPNGKVAVRNIALGVRPGEVFGFLGTNGAGKTTTISILCQEFYPTSGRAYV 1564
Query: 63 AGHDVVKEPQEVRKKIGIVFQ-DPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKF 121
G+D+V E E + IG Q D LD LT E++Y++ + G+ R + L+K
Sbjct: 1565 CGNDIVTESSEALRCIGYCPQFDACLDL-LTVEEHLYLYAGVRGISSRACDRVVRGLMKL 1623
Query: 122 VELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMK 181
L ++ SGG +R+L +A +LI P ++F DEP+ G+DP R +W I T+
Sbjct: 1624 CGLTEYRRTKSHELSGGNRRKLSVAVSLIGGPRVVFFDEPSAGMDPVARRGLWNAIETVA 1683
Query: 182 EEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVGNDI---IYLKLESP 238
+ ++ LTTH+++E E LA R+AI+ G + G LK+ G + + ESP
Sbjct: 1684 D--NCSVVLTTHHLEEVEALAHRVAIMVDGTLRCIGDKTHLKQKYGTGFEVAVRVADESP 1741
Query: 239 ----------KEELKCLKADFIRGCKLLPDGRVRIDVENATEALPKLFELAQKNNVKILE 288
+EE K +R + + + + AL + QK ++I +
Sbjct: 1742 EVMAGVELFFEEEFPSSKLTEVRAGRFTYQLPSTVRLSSVFTALEQ-----QKEKLQICD 1796
Query: 289 VTYHRPTLNDVFLHLTGR-EIRDEE 312
+ + ++ VF+ ++ + E+ EE
Sbjct: 1797 YSVSQTSIEQVFMRISEKAELEHEE 1821
Score = 145 bits (362), Expect = 7e-34
Identities = 81/212 (38%), Positives = 123/212 (57%), Gaps = 2/212 (0%)
Query: 16 FTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAIVAGHDVVKEPQEVR 75
F AV + + + +GEI LG NGAGK+TT++++T +L+ G V GH V E VR
Sbjct: 734 FAAVDDLCWSLNEGEISVLLGHNGAGKSTTMNLMTGMLEADGGDCYVYGHSVRHELSAVR 793
Query: 76 KKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKFVELWRFKDRPVKYF 135
++IG+ Q L +LT E++ + I GL+G E ++ I LL V+L + K
Sbjct: 794 QEIGLCPQHNILWPQLTVREHLDYYAAIKGLRGSEKEDAIRRLLAAVDLEDKEHYMSKAL 853
Query: 136 SGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMKEEHEMTIFLTTHYM 195
SGG +R+L +A A + ++ LDEPT G+D R H W ++ M + H TI LTTH+M
Sbjct: 854 SGGQKRKLSVAVAFVGGSRLVILDEPTAGMDVGARRHTWSLLKEMAKWH--TILLTTHFM 911
Query: 196 DEAEQLADRIAIIDHGKIIAEGTSEELKKLVG 227
DEA+ L D +AI+ G++ G++ LK +G
Sbjct: 912 DEADLLGDTVAIMSKGRLQCAGSNMFLKSKLG 943
>pir||C72303 ABC transporter, ATP-binding protein - Thermotoga maritima (strain
MSB8) >gi|4981569|gb|AAD36105.1|AE001764_8 (AE001764)
ABC transporter, ATP-binding protein [Thermotoga
maritima]
Length = 293
Score = 152 bits (379), Expect = 7e-36
Identities = 86/223 (38%), Positives = 133/223 (59%), Gaps = 6/223 (2%)
Query: 1 MYAIEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKA 60
M +EV +L K YG V+G++F V++GEIF F+GPNGAGKTTT+ +L L+ P SG A
Sbjct: 1 MSVVEVRDLTKYYGKSRGVEGVTFSVEEGEIFGFIGPNGAGKTTTIRLLLGLIFPDSGLA 60
Query: 61 IVAGHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLK 120
+ G DV+KE +E+RK +G + + S E+T E + Y + + ++EL
Sbjct: 61 EIFGKDVLKEGKEIRKNVGYIPGEVSFYPEVTVEEFLRYSASFY---EKVDWDYVKELCG 117
Query: 121 FVELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTM 180
L + +K S G ++++ I +AL+H P++L LDEPT GLDP + +E ++
Sbjct: 118 VFSL--DTKKRIKELSMGNKKKVAIVQALMHRPKLLILDEPTNGLDPIVQNTFFEILKNE 175
Query: 181 KEEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELK 223
KE+ T+F ++H + E E+L DR+A+I G+II E LK
Sbjct: 176 KEK-GTTVFFSSHILSEVERLCDRVAMIKDGRIIRVEKVENLK 217
>pir||A83142 probable ATP-binding component of ABC transporter PA4037 [imported]
- Pseudomonas aeruginosa (strain PAO1)
>gi|9950232|gb|AAG07424.1|AE004820_9 (AE004820) probable
ATP-binding component of ABC transporter [Pseudomonas
aeruginosa]
Length = 308
Score = 151 bits (377), Expect = 1e-35
Identities = 87/304 (28%), Positives = 162/304 (52%), Gaps = 5/304 (1%)
Query: 4 IEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAIVA 63
I+++ L K++ T V +SF++ +GEI LGPNGAGK+TT+ +L+ L P++G +
Sbjct: 2 IDIDRLSKRFSGRTVVNDLSFRIDRGEIVGLLGPNGAGKSTTLKMLSGFLAPSAGSVRIF 61
Query: 64 GHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKFVE 123
G D+ + ++ +K IG + ++ E+T + I GRE + +I+ + +E
Sbjct: 62 GFDMQDKARQAQKLIGYLPENAPSYGEMTVEGFLAFVASIRDYSGREKRRRIDSAMDCME 121
Query: 124 LWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMKEE 183
L + ++ S G +RR+ +A+A++H+PE+L LDEPT GLDP + + + ++ + E
Sbjct: 122 LRDERRSIIETLSKGFKRRVALAQAILHDPELLLLDEPTDGLDPNQKHQVRQLVKNLSE- 180
Query: 184 HEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELK-KLVGNDIIYLKLESPKEEL 242
+ ++TH ++E + R +I+ G+++A+ T EL+ + + + L +E+P + L
Sbjct: 181 -SKIVVISTHILEEVSFMCSRALVINGGRLLADNTPGELRTRSRYHHAVSLSIEAPVDPL 239
Query: 243 KCLKADFIRGCKLLPD--GRVRIDVENATEALPKLFELAQKNNVKILEVTYHRPTLNDVF 300
+ G + PD G + I + LP L L + ++ V L +VF
Sbjct: 240 AIAMLPGVAGIEGRPDRAGTLTILARPGAQILPALNRLIHGSGWRVSGVRTEHGQLEEVF 299
Query: 301 LHLT 304
LT
Sbjct: 300 RQLT 303
>gi|4557876 ATP-binding cassette, sub-family A member 4; ATP binding cassette
transporter; ATP-binding transporter, retina-specific;
rim protein [Homo sapiens] >gi|1888527|gb|AAC51144.1|
(U88667) ATP-binding cassette transporter [Homo sapiens]
Length = 2273
Score = 150 bits (376), Expect = 2e-35
Identities = 89/232 (38%), Positives = 131/232 (56%), Gaps = 5/232 (2%)
Query: 6 VENLVKKYGDF--TAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAIVA 63
V+NLVK + AV ++ + +I AFLG NGAGKTTT+ +LT LL PTSG +V
Sbjct: 931 VKNLVKIFEPCGRPAVDRLNITFYENQITAFLGHNGAGKTTTLSILTGLLPPTSGTVLVG 990
Query: 64 GHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKFVE 123
G D+ VR+ +G+ Q L LT E+M + + G E + ++E +L+
Sbjct: 991 GRDIETSLDAVRQSLGMCPQHNILFHHLTVAEHMLFYAQLKGKSQEEAQLEMEAMLEDTG 1050
Query: 124 LWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMKEE 183
L ++ + SGGMQR+L +A A + + +++ LDEPT G+DP +R IW+ + +K
Sbjct: 1051 LHHKRNEEAQDLSGGMQRKLSVAIAFVGDAKVVILDEPTSGVDPYSRRSIWDLL--LKYR 1108
Query: 184 HEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVGNDIIYLKL 235
TI + TH+MDEA+ DRIAII G++ GT LK G +YL L
Sbjct: 1109 SGRTIIMPTHHMDEADHQGDRIAIIAQGRLYCSGTPLFLKNCFGTG-LYLTL 1159
Score = 142 bits (354), Expect = 6e-33
Identities = 95/306 (31%), Positives = 162/306 (52%), Gaps = 13/306 (4%)
Query: 18 AVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAIVAGHDVVKEPQEVRKK 77
AV + V+ GE F LG NGAGKTTT +LT TSG A VAG ++ EV +
Sbjct: 1954 AVDRLCVGVRPGECFGLLGVNGAGKTTTFKMLTGDTTVTSGDATVAGKSILTNISEVHQN 2013
Query: 78 IGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKFVELWRFKDRPVKYFSG 137
+G Q ++D LT E++Y++ + G+ E+++ +K + L + D +SG
Sbjct: 2014 MGYCPQFDAIDELLTGREHLYLYARLRGVPAEEIEKVANWSIKSLGLTVYADCLAGTYSG 2073
Query: 138 GMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMKEEHEMTIFLTTHYMDE 197
G +R+L A ALI P ++ LDEPT G+DPQ R +W I ++ + + LT+H M+E
Sbjct: 2074 GNKRKLSTAIALIGCPPLVLLDEPTTGMDPQARRMLWNVIVSIIRKGR-AVVLTSHSMEE 2132
Query: 198 AEQLADRIAIIDHGKIIAEGTSEELKKLVGND-IIYLKLESPKEEL--------KCLKAD 248
E L R+AI+ G GT + LK G+ I+ +K++SPK++L + + +
Sbjct: 2133 CEALCTRLAIMVKGAFRCMGTIQHLKSKFGDGYIVTMKIKSPKDDLLPDLNPVEQFFQGN 2192
Query: 249 FIRGCKLLPDGRVRIDVENATEALPKLFE--LAQKNNVKILEVTYHRPTLNDVFLHLTGR 306
F G + + ++ +L ++F+ L+ K+++ I E + + TL+ VF++ +
Sbjct: 2193 F-PGSVQRERHYNMLQFQVSSSSLARIFQLLLSHKDSLLIEEYSVTQTTLDQVFVNFAKQ 2251
Query: 307 EIRDEE 312
+ +
Sbjct: 2252 QTESHD 2257
>gi|6671495 ATP-binding cassette, sub-family A, member 4; ATP-binding cassette
10; Rim protein [Mus musculus] >gi|2547314|gb|AAC23916.1|
(AF000149) ATP-binding cassette transporter [Mus
musculus]
Length = 2310
Score = 150 bits (376), Expect = 2e-35
Identities = 88/232 (37%), Positives = 132/232 (55%), Gaps = 5/232 (2%)
Query: 6 VENLVKKY--GDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAIVA 63
V+NLVK + AV ++ + +I AFLG NGAGKTTT+ +LT LL PTSG ++
Sbjct: 931 VKNLVKVFEPSGRPAVDRLNITFYENQITAFLGHNGAGKTTTLSILTGLLPPTSGTVLIG 990
Query: 64 GHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKFVE 123
G D+ VR+ +G+ Q L LT E++ + + G E + ++E +L+
Sbjct: 991 GKDIETNLDVVRQSLGMCPQHNILFHHLTVAEHILFYAQLKGRSWEEAQLEMEAMLEDTG 1050
Query: 124 LWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMKEE 183
L ++ + SGGMQR+L +A A + + +++ LDEPT G+DP +R IW+ + +K
Sbjct: 1051 LHHKRNEEAQDLSGGMQRKLSVAIAFVGDSKVVVLDEPTSGVDPYSRRSIWDLL--LKYR 1108
Query: 184 HEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVGNDIIYLKL 235
TI ++TH+MDEA+ L DRIAII G++ GT LK G YL L
Sbjct: 1109 SGRTIIMSTHHMDEADLLGDRIAIISQGRLYCSGTPLFLKNCFGTG-FYLTL 1159
Score = 142 bits (354), Expect = 6e-33
Identities = 98/317 (30%), Positives = 168/317 (52%), Gaps = 15/317 (4%)
Query: 4 IEVENLVKKYGDFT--AVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAI 61
+++ L K Y + AV + V+ GE F LG NGAGKTTT +LT TSG A
Sbjct: 1937 LKLNELTKVYSGSSSPAVDRLCVGVRPGECFGLLGVNGAGKTTTFKMLTGDTTVTSGDAT 1996
Query: 62 VAGHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKF 121
VAG ++ +V + +G Q ++D LT E++Y++ + G+ +E+++ ++
Sbjct: 1997 VAGKSILTSISDVHQNMGYCPQFDAIDDLLTGREHLYLYARLRGVPSKEIEKVANWGIQS 2056
Query: 122 VELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMK 181
+ L + DR +SGG +R+L A AL P +L LDEPT G+DPQ R +W I ++
Sbjct: 2057 LGLSLYADRLAGTYSGGNKRKLSTAIALTGCPPLLLLDEPTTGMDPQARRMLWNTIVSII 2116
Query: 182 EEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVGND-IIYLKLESPKE 240
E + LT+H M+E E L R+AI+ G GT + LK G+ I+ +K++SPK+
Sbjct: 2117 REGR-AVVLTSHSMEECEALCTRLAIMVKGTFQCLGTIQHLKYKFGDGYIVTMKIKSPKD 2175
Query: 241 EL--------KCLKADFIRGCKLLPDGRVRIDVENATEALPKLFEL--AQKNNVKILEVT 290
+L + + +F G + + + +L ++F+L + K+++ I E +
Sbjct: 2176 DLLPDLNPVEQFFQGNF-PGSVQRERHHSMLQFQVPSSSLARIFQLLISHKDSLLIEEYS 2234
Query: 291 YHRPTLNDVFLHLTGRE 307
+ TL+ VF++ ++
Sbjct: 2235 VTQTTLDQVFVNFAKQQ 2251
>emb|CAC11986.1| (AL445065) ABC transporter cdd4-like protein ScnF related protein
[Thermoplasma acidophilum]
Length = 297
Score = 150 bits (374), Expect = 3e-35
Identities = 80/225 (35%), Positives = 125/225 (55%), Gaps = 2/225 (0%)
Query: 1 MYAIEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKA 60
M I V N+ K+YGD A+ +SF V LGPNGAGKTT + ++T +++P+ G
Sbjct: 1 MMGISVSNVSKRYGDLMALNRVSFNVNGTGCLVLLGPNGAGKTTLMKIMTNIIRPSEGNV 60
Query: 61 IVAGHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLK 120
+ G +V + P + + +G + + P +T YE + I G+ + +++ +
Sbjct: 61 SINGFNVRENPGKALETVGSLIEQPEFYPYITGYEALMFTCRIRGISKEKCISEVQRVST 120
Query: 121 FVELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTM 180
+ +R K +S GM++R+ +A ALI +P I+ LDEPT GLDP I + I M
Sbjct: 121 LTHCRDYLNRKTKEYSRGMKQRVGLATALIGDPSIIILDEPTFGLDPNGMMEIRDIIMKM 180
Query: 181 KEEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKL 225
K+ E I L+TH + EAE LAD I IIDHG+++ G E+ + L
Sbjct: 181 KK--EKLIVLSTHLISEAELLADYIGIIDHGRLMHFGPVEKQRYL 223
>gb|AAC48716.1| (U90126) ABC transporter [Bos taurus]
Length = 2281
Score = 149 bits (372), Expect = 5e-35
Identities = 86/232 (37%), Positives = 133/232 (57%), Gaps = 5/232 (2%)
Query: 6 VENLVKKYGDF--TAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAIVA 63
V+NLVK + + AV ++ + +I AFLG NGAGKTTT+ ++T LL PTSG +V
Sbjct: 931 VKNLVKIFEPYGRPAVDRLNITFYESQITAFLGHNGAGKTTTLSIMTGLLPPTSGTVLVG 990
Query: 64 GHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKFVE 123
G D+ +R+ +G+ Q L LT E++ + + G E + ++E +L+
Sbjct: 991 GKDIETNLDAIRQSLGMCPQHNILFHHLTVAEHILFYAQLKGRSWDEAQLEMEAMLEDTG 1050
Query: 124 LWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMKEE 183
L ++ + SGG+QR+L +A A + + +++ LDEPT G+DP +R IW+ + +K
Sbjct: 1051 LHHKRNEEARDLSGGVQRKLSVAIAFVGDAKVVVLDEPTSGVDPYSRRSIWDLL--LKYR 1108
Query: 184 HEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVGNDIIYLKL 235
TI ++TH+MDEA+ L DRIAII G++ GT LK G YL L
Sbjct: 1109 SGRTIIMSTHHMDEADILGDRIAIISQGRLYCSGTPLFLKNCFGTG-FYLTL 1159
Score = 143 bits (357), Expect = 3e-33
Identities = 99/317 (31%), Positives = 165/317 (51%), Gaps = 15/317 (4%)
Query: 4 IEVENLVKKYGDFT--AVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAI 61
+ + L K Y + AV + V+ GE F LG NGAGKTTT +LT TSG A
Sbjct: 1936 LRLNELTKVYSGTSSPAVDRLCVGVRPGECFGLLGVNGAGKTTTFKMLTGDTAVTSGDAT 1995
Query: 62 VAGHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKF 121
VAG ++ +V + +G Q ++D LT E++Y++ + G+ E++ ++
Sbjct: 1996 VAGKSILTNISDVHQSMGYCPQFDAIDDLLTGREHLYLYARLRGVPAEEIERVTNWSIQS 2055
Query: 122 VELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMK 181
+ L + DR +SGG +R+L A ALI P ++ LDEPT G+DPQ R +W I +
Sbjct: 2056 LGLSLYADRLAGTYSGGNKRKLSTAIALIGCPPLVLLDEPTTGMDPQARRMLWNTIMGII 2115
Query: 182 EEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVGND-IIYLKLESPKE 240
E E + LT+H M+E E L R+AI+ G GT + LK G+ I+ +K+ SPK+
Sbjct: 2116 RE-ERAVVLTSHSMEECEALCTRLAIMVKGAFQCLGTIQHLKSKFGDGYIVTMKIRSPKD 2174
Query: 241 EL--------KCLKADFIRGCKLLPDGRVRIDVENATEALPKLFEL--AQKNNVKILEVT 290
+L + + +F G + + ++ +L ++F L + K+++ I E +
Sbjct: 2175 DLLPDLGPVEQFFQGNF-PGSVQRERHYNTLQFQVSSSSLARIFRLLVSHKDSLLIEEYS 2233
Query: 291 YHRPTLNDVFLHLTGRE 307
+ TL+ VF++ ++
Sbjct: 2234 VTQTTLDQVFVNFAKQQ 2250
>pir||C75593 probable ABC transporter, ATP-binding protein - Deinococcus
radiodurans (strain R1)
>gi|6460585|gb|AAF12291.1|AE001862_117 (AE001862) ABC
transporter, ATP-binding protein, putative [Deinococcus
radiodurans]
Length = 301
Score = 149 bits (372), Expect = 5e-35
Identities = 98/299 (32%), Positives = 155/299 (51%), Gaps = 14/299 (4%)
Query: 7 ENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAIVAGHD 66
E + K YG TA+ + ++ GE+ A LGPNGAGK+T + +L L P++G+ V G D
Sbjct: 6 EQVSKTYGHVTALSDFNLTLRTGELTALLGPNGAGKSTAIGLLLGLSAPSAGQVRVLGAD 65
Query: 67 VVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKFVELWR 126
+ +VR +IG + Q+ +L LT E + + Y ++E L +L
Sbjct: 66 PRRN--DVRARIGAMPQESALPAGLTVREAVTLFASFY-----PAPLGVDEALALADLGP 118
Query: 127 FKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMKEEHEM 186
R SGG +RRL A A++ +PE+L +DEPT G+D Q+RA WE + ++
Sbjct: 119 VAGRRAAQLSGGQKRRLAFALAVVGDPELLLIDEPTTGMDAQSRAAFWEAVTGLRARGR- 177
Query: 187 TIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVGNDIIYLKLESPKEELKCLK 246
TI LTTHY++EAE+ ADR+ +++ G+I+A+ T + L+ VG + + + EL+ L
Sbjct: 178 TILLTTHYLEEAERTADRVVVMNGGRILADDTPQGLRSGVGGARVSFVSDLVQAELERLP 237
Query: 247 ADFIRGCKLLPDGRVRIDVENATEALPKLFELAQKNNVKILEVTYHRPTLNDVFLHLTG 305
+ ++ GR + L L + LEV R TL + +L LTG
Sbjct: 238 G--VSAVQVDAAGRADLRTSVPEALLAAL--IGSGTTFSDLEV--RRATLEEAYLQLTG 290
>pir||A70039 ABC transporter (ATP-binding protein) homolog yvfR - Bacillus
subtilis >gi|1945718|emb|CAB08012.1| (Z94043)
hypothetical protein [Bacillus subtilis]
>gi|2635922|emb|CAB15414.1| (Z99121) similar to ABC
transporter (ATP-binding protein) [Bacillus subtilis]
Length = 301
Score = 148 bits (370), Expect = 8e-35
Identities = 99/303 (32%), Positives = 157/303 (51%), Gaps = 16/303 (5%)
Query: 3 AIEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAIV 62
A+ V N+ K + TAV ISF ++KGEI A LGPNGAGKTT V ++ LLKP+ G+ +
Sbjct: 5 AVTVSNVTKHFQRKTAVNNISFSIEKGEIAAILGPNGAGKTTVVSMILGLLKPSEGE--I 62
Query: 63 AGHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKFV 122
+ V + Q+VR+KIG++ Q+ S+ L E + + Y ++EL+
Sbjct: 63 KLFNRVPDDQQVREKIGVMLQEVSVMPGLKVDEILELFRSYY-----PNPLSMKELVSLT 117
Query: 123 ELWR--FKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTM 180
L + K R K SGG +RRL A AL PE+L LDEPT+G+D +R W+ I +
Sbjct: 118 ALTKEDLKTRAEK-LSGGQKRRLSFALALAGNPELLILDEPTVGMDTSSRHRFWQTIHGL 176
Query: 181 KEEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVGNDIIYLKLESPKE 240
++ + TI +THY+ EA+ A RI G+++A+G+ +++ + + L S E
Sbjct: 177 SDQGK-TIIFSTHYLQEADDAAQRILFFTEGQLVADGSPMQIRSRIQKQSVSFTLHS-SE 234
Query: 241 ELKCLKADFIRGCKLLPDGRVRIDVENATEALPKLFELAQKNNVKILEVTYHRPTLNDVF 300
L+ L + R I N + L +F+ N+ ++ + TL++ F
Sbjct: 235 SLERLSCHPEVERVIHEHERTIIQTSNTDKVLALIFQ----ENIHARDIRIEQATLDEAF 290
Query: 301 LHL 303
L
Sbjct: 291 RQL 293
>gb|AAG21390.1|AF302051_4 (AF302051) ABC transporter ATP binding subunit [Bacillus
licheniformis]
Length = 299
Score = 148 bits (369), Expect = 1e-34
Identities = 100/307 (32%), Positives = 155/307 (49%), Gaps = 19/307 (6%)
Query: 4 IEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAIVA 63
+ + N+ K + TAV I F +KKGEI A LGPNGAGKTTT+ ++ LLKPT+G +
Sbjct: 5 VSLTNVTKTFRQKTAVDQIDFSIKKGEIVAILGPNGAGKTTTISMILGLLKPTAGN--IT 62
Query: 64 GHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKFVE 123
D + + VR+KIG + Q+ S+ L + I +I R K K
Sbjct: 63 LFDSMPHEKRVREKIGTMLQEVSVMPGLRC--RVEIIELI-----RSYYPKPLSFQKLRT 115
Query: 124 LWRFKDRPVK----YFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRT 179
L D+ +K SGG +RRL A AL +PE++ DEPT+G+D +R W+ +++
Sbjct: 116 LTGLTDKDLKTQAEKLSGGQKRRLGFALALAGDPELMIFDEPTVGMDITSRNRFWQTVQS 175
Query: 180 MKEEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVGNDIIYLKLESPK 239
+ E+ + TI +THY+ EA+ A RI + GKI+A+GT ++K + + + P+
Sbjct: 176 LAEQGK-TIIFSTHYLQEADDAAQRILLFKDGKIVADGTPLQIKSRISKHSVSF-IVDPE 233
Query: 240 EELKCLKADFIRGCKLLPDGRVRIDVENATEALPKLFELAQKNNVKILEVTYHRPTLNDV 299
+ L+ L + RV ID N K+ EL + ++ R L +
Sbjct: 234 QSLEKLYQHPETEQIFRKNNRVYIDTANT----DKILELIFSEKIGAYDIQIERGNLEEA 289
Query: 300 FLHLTGR 306
F LT +
Sbjct: 290 FRQLTSK 296
>gi|9506365 ATP-binding cassette, sub-family A (ABC1), member 7 [Homo sapiens]
>gi|9211112|gb|AAF85794.1|AF250238_1 (AF250238)
macrophage ABC transporter [Homo sapiens]
Length = 2146
Score = 147 bits (368), Expect = 1e-34
Identities = 81/227 (35%), Positives = 133/227 (57%), Gaps = 4/227 (1%)
Query: 4 IEVENLVKKY--GDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAI 61
+ V +L K++ A++G+S +G I AFLG NGAGKTTT+ +L+ L P+ G A
Sbjct: 807 VSVRSLEKRFPGSPQPALRGLSLDFYQGHITAFLGHNGAGKTTTLSILSGLFPPSGGSAF 866
Query: 62 VAGHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKF 121
+ GHDV +R +G+ Q L LT E+++ +G + GL + + + LL+
Sbjct: 867 ILGHDVRSSMAAIRPHLGVCPQYNVLFDMLTVDEHVWFYGRLKGLSAAVVGPEQDRLLQD 926
Query: 122 VELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMK 181
V L + ++ SGGMQR+L +A A + +++ LDEPT G+DP +R IWE + +K
Sbjct: 927 VGLVSKQSVQTRHLSGGMQRKLSVAIAFVGGSQVVILDEPTAGVDPASRRGIWELL--LK 984
Query: 182 EEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVGN 228
T+ L+TH++DEAE L DR+A++ G++ G+ L++ +G+
Sbjct: 985 YREGRTLILSTHHLDEAELLGDRVAVVAGGRLCCCGSPLFLRRHLGS 1031
Score = 130 bits (323), Expect = 3e-29
Identities = 95/321 (29%), Positives = 163/321 (50%), Gaps = 14/321 (4%)
Query: 6 VENLVKKYGD--FTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAIVA 63
+ NL K Y AV + + GE F LG NGAGKT+T ++T + G+A++A
Sbjct: 1795 LRNLTKVYRGQRMPAVDRLCLGIPPGECFGLLGVNGAGKTSTFRMVTGDTLASRGEAVLA 1854
Query: 64 GHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKFVE 123
GH V +EP +G Q ++ LT E++ + + G+ ++ + L +
Sbjct: 1855 GHSVAREPSAAHLSMGYCPQSDAIFELLTGREHLELLARLRGVPEAQVAQTAGSGLARLG 1914
Query: 124 LWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMKEE 183
L + DRP +SGG +R+L A AL+ +P ++FLDEPT G+DP R +W + + E
Sbjct: 1915 LSWYADRPAGTYSGGNKRKLATALALVGDPAVVFLDEPTTGMDPSARRFLWNSLLAVVRE 1974
Query: 184 HEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELK-KLVGNDIIYLKLESPKEE- 241
++ LT+H M+E E L R+AI+ +G+ G+ + LK + + L++ + + +
Sbjct: 1975 GR-SVMLTSHSMEECEALCSRLAIMVNGRFRCLGSPQHLKGRFAAGHTLTLRVPAARSQP 2033
Query: 242 LKCLKADFIRGCKL--LPDGRVRIDVENATE-ALPKLF-ELA---QKNNVKILEVTYHRP 294
A G +L GR+R + AL ++F ELA ++ V+ V+ +
Sbjct: 2034 AAAFVAAEFPGSELREAHGGRLRFQLPPGGRCALARVFGELAVHGAEHGVEDFSVS--QT 2091
Query: 295 TLNDVFLHLTGREIRDEEGGE 315
L +VFL+ + + +DE+ E
Sbjct: 2092 MLEEVFLYFSKDQGKDEDTEE 2112
>gi|11427664 ATP-binding cassette, sub-family A (ABC1), member 7 [Homo sapiens]
Length = 2146
Score = 147 bits (368), Expect = 1e-34
Identities = 81/227 (35%), Positives = 133/227 (57%), Gaps = 4/227 (1%)
Query: 4 IEVENLVKKY--GDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAI 61
+ V +L K++ A++G+S +G I AFLG NGAGKTTT+ +L+ L P+ G A
Sbjct: 807 VSVRSLEKRFPGSPQPALRGLSLDFYQGHITAFLGHNGAGKTTTLSILSGLFPPSGGSAF 866
Query: 62 VAGHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKF 121
+ GHDV +R +G+ Q L LT E+++ +G + GL + + + LL+
Sbjct: 867 ILGHDVRSSMAAIRPHLGVCPQYNVLFDMLTVDEHVWFYGRLKGLSAAVVGPEQDRLLQD 926
Query: 122 VELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMK 181
V L + ++ SGGMQR+L +A A + +++ LDEPT G+DP +R IWE + +K
Sbjct: 927 VGLVSKQSVQTRHLSGGMQRKLSVAIAFVGGSQVVILDEPTAGVDPASRRGIWELL--LK 984
Query: 182 EEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVGN 228
T+ L+TH++DEAE L DR+A++ G++ G+ L++ +G+
Sbjct: 985 YREGRTLILSTHHLDEAELLGDRVAVVAGGRLCCCGSPLFLRRHLGS 1031
Score = 130 bits (324), Expect = 2e-29
Identities = 95/321 (29%), Positives = 163/321 (50%), Gaps = 14/321 (4%)
Query: 6 VENLVKKYGD--FTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAIVA 63
+ NL K Y AV + + GE F LG NGAGKT+T ++T + G+A++A
Sbjct: 1795 LRNLTKVYRGQRMPAVDRLCLGIPPGECFGLLGVNGAGKTSTFRMVTGDTLASRGEAVLA 1854
Query: 64 GHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKFVE 123
GH V +EP +G Q ++ LT E++ + + G+ ++ + L +
Sbjct: 1855 GHSVAREPSAAHLSMGYCPQSDAIFELLTGREHLELLARLRGVPEAQVAQTAGSGLARLG 1914
Query: 124 LWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMKEE 183
L + DRP +SGG +R+L A AL+ +P ++FLDEPT G+DP R +W + + E
Sbjct: 1915 LSWYADRPAGTYSGGNKRKLATALALVGDPAVVFLDEPTTGMDPSARRFLWNSLLAVVRE 1974
Query: 184 HEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELK-KLVGNDIIYLKLESPKEE- 241
++ LT+H M+E E L R+AI+ +G+ G+ + LK + + L++ + + +
Sbjct: 1975 GR-SVMLTSHSMEECEALCSRLAIMVNGRFRCLGSPQHLKGRFAAGHTLTLRVPAARSQP 2033
Query: 242 LKCLKADFIRGCKL--LPDGRVRIDVENATE-ALPKLF-ELA---QKNNVKILEVTYHRP 294
A G +L GR+R + AL ++F ELA ++ V+ V+ +
Sbjct: 2034 AAAFVAAEFPGAELREAHGGRLRFQLPPGGRCALARVFGELAVHGAEHGVEDFSVS--QT 2091
Query: 295 TLNDVFLHLTGREIRDEEGGE 315
L +VFL+ + + +DE+ E
Sbjct: 2092 MLEEVFLYFSKDQGKDEDTEE 2112
>sp|Q07756|NODI_AZOCA NODULATION ATP-BINDING PROTEIN I >gi|486720|pir||S35007 nodulation
protein nodI - Azorhizobium caulinodans
>gi|310297|gb|AAB51167.1| (L18897) member of the
two-components ABC-transporters family; putative
[Azorhizobium caulinodans]
Length = 320
Score = 147 bits (367), Expect = 2e-34
Identities = 70/226 (30%), Positives = 131/226 (56%), Gaps = 1/226 (0%)
Query: 2 YAIEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAI 61
Y + + KK G ++G+ V++GE + +G NGAGK++ ++++ L P G
Sbjct: 13 YTVSATGVWKKRGGIDVLRGLDMYVRRGERYGIMGTNGAGKSSLINIILGLTPPDRGTVT 72
Query: 62 VAGHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKF 121
V G D+ ++ R +IG+V QD L++ +T YEN+ ++G + + E +++ +++ +
Sbjct: 73 VFGKDMRRQGHLARARIGVVPQDDCLEQNMTPYENVMLYGRLCRMTASEARKRADQIFEK 132
Query: 122 VELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMK 181
+ +RPV+ SGGM+R +ARAL+++P ++ LDE T+GLD ++R+ +W+ I
Sbjct: 133 FSMMDCANRPVRLLSGGMRRLTMVARALVNDPYVIILDEATVGLDAKSRSALWQQIEA-S 191
Query: 182 EEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVG 227
T+ + +H ++ E++ DRIA I G + AE + L K +G
Sbjct: 192 NATGATVLVISHLAEDLERMTDRIACICAGTVRAEWETAALLKALG 237
>pir||E69771 ABC transporter (ATP-binding protein) homolog ydbJ - Bacillus
subtilis >gi|1881259|dbj|BAA19286.1| (AB001488) PROBABLE
TRANSPORT ATP BINDING PROTEIN. [Bacillus subtilis]
>gi|2632749|emb|CAB12256.1| (Z99106) similar to ABC
transporter (ATP-binding protein) [Bacillus subtilis]
Length = 308
Score = 147 bits (367), Expect = 2e-34
Identities = 96/316 (30%), Positives = 163/316 (51%), Gaps = 19/316 (6%)
Query: 4 IEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAIVA 63
+ +E L KK G +K IS V +GEI LGPNG+GKTT + ++ LLK SG ++
Sbjct: 6 LHIEGLDKKIGSKQILKQISMDVMEGEIIGLLGPNGSGKTTLIRIIVGLLKQNSGSVTIS 65
Query: 64 GHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKFVE 123
G E ++ + +G + ++P LT +EN+ ++ + E+++E+++ V
Sbjct: 66 GFQHDTEFEKAMEAVGAIVENPEFYPYLTGWENLKHFANMHK---KIADERLDEVVERVG 122
Query: 124 LWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMKEE 183
L VK +S GM++RL IA+A++H P++L LDEPT GLDP ++I+ + E
Sbjct: 123 LTSAIHDKVKTYSLGMRQRLGIAQAILHRPKLLILDEPTNGLDPAGMKDFRDHIKELAEM 182
Query: 184 HEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAE----GTSEELKKLVGNDIIYLKLESPK 239
+ TH + E E L DR+ II G+I AE GT + +K + ++++ +
Sbjct: 183 EGTAVLFATHLLREVEDLCDRVIIIQKGEIKAEVSLQGTDQTTEKAI------IEVQPQE 236
Query: 240 EELKCLKADFIRGCKLLPDGRVRIDVENATEALPKLFELAQKNNVKILEVTYHRPTLNDV 299
+ L L + + DG + ++V A E +P+L ++ + +T + +L D
Sbjct: 237 KALNWLTGNQYQAES--QDGTIVVEV--AKENIPELNRSLVGQDLNVFSITPYTQSLEDE 292
Query: 300 FLHLTGREIRDEEGGE 315
F+ T EEG E
Sbjct: 293 FIKAT--TAHQEEGEE 306
>gb|AAK42548.1| ABC transporter, ATP binding protein [Sulfolobus solfataricus]
Length = 248
Score = 146 bits (366), Expect = 2e-34
Identities = 89/225 (39%), Positives = 132/225 (58%), Gaps = 5/225 (2%)
Query: 2 YAIEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAI 61
+A+ V NL K+ G+ +KG+SF V+ GE+F +GPNGAGKTTT+ +L ++K +G A
Sbjct: 8 FAVSVTNLRKRIGNKEILKGLSFDVESGEVFGIVGPNGAGKTTTLRILAGIIKNFNGDAK 67
Query: 62 VAGHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEEL-LK 120
V G ++ Q I + +D +LT YEN+ + +Y +ELKEK +L ++
Sbjct: 68 VFGLRPIEAKQN--GYISYMPEDAFPYEKLTGYENLDFYAELYAKGDKELKEKYLKLGIE 125
Query: 121 FVELW-RFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRT 179
L R D+ +Y S GM+RRL IAR L+ P++ LDEPT LD ++ I I
Sbjct: 126 IANLGERIYDKTAEY-SRGMKRRLIIARTLMVMPKLSVLDEPTSALDVESAVRIRNIILE 184
Query: 180 MKEEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKK 224
M + MTI L++H M E E L DRI +I+ G+I+A G +E+ K
Sbjct: 185 MARRYNMTIILSSHNMLEVEYLCDRITLINDGRIVANGKPKEIIK 229
>sp|P74548|CYSA_SYNY3 SULFATE TRANSPORT ATP-BINDING PROTEIN CYSA >gi|7442560|pir||S76743
hypothetical transport protein - Synechocystis sp.
(strain PCC 6803) >gi|1653744|dbj|BAA18655.1| (D90916)
sulfate transport system permease protein [Synechocystis
sp.]
Length = 355
Score = 146 bits (366), Expect = 2e-34
Identities = 80/221 (36%), Positives = 133/221 (59%), Gaps = 3/221 (1%)
Query: 3 AIEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAIV 62
+I + N+ K++GDFTA+K I+ +V G++ A LGP+G+GK+T + + L +P G+ I+
Sbjct: 2 SIIINNVSKQFGDFTALKDINLEVPDGKLVALLGPSGSGKSTLLRAIAGLEEPDQGQIII 61
Query: 63 AGHDVVKEPQEVRKK-IGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKF 121
G D ++RK+ IG VFQ +L + LT +N+ I + KE++EELL
Sbjct: 62 NGQDATHV--DIRKRNIGFVFQHYALFKHLTIRQNIAFGLEIRKHPPAKTKERVEELLSL 119
Query: 122 VELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMK 181
++L +R SGG ++R+ +ARAL +P++L LDEP LD + R + ++R +
Sbjct: 120 IQLEGLGNRYPSQLSGGQRQRVALARALAVQPQVLLLDEPFGALDAKVRKELRAWLRKLH 179
Query: 182 EEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEEL 222
+E +T TH +EA ++AD I ++ +GKI GT+EE+
Sbjct: 180 DEVHLTSVFVTHDQEEAMEVADEIVVMSNGKIEQVGTAEEI 220
>pir||H75288 ABC transporter, ATP-binding protein - Deinococcus radiodurans
(strain R1) >gi|6460124|gb|AAF11860.1|AE002063_3
(AE002063) ABC transporter, ATP-binding protein
[Deinococcus radiodurans]
Length = 327
Score = 146 bits (366), Expect = 2e-34
Identities = 99/316 (31%), Positives = 162/316 (50%), Gaps = 12/316 (3%)
Query: 4 IEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAIVA 63
IE L K Y D V G++ V GE+F FLGPNGAGK+TTV +L L+ P+ G+A V
Sbjct: 16 IETRELRKVYRDRAVVDGLTLTVGAGEVFGFLGPNGAGKSTTVKMLLGLVIPSGGEARV- 74
Query: 64 GHDVVKEPQE--VRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKF 121
+ P + VR ++G + + +TA E + HG + G+K EL+ ++ ++L+
Sbjct: 75 ---LCGSPADPAVRARLGFLPEQFRFQLWMTAEEFLNFHGQLAGMKSNELRTRVPQVLEE 131
Query: 122 VELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMK 181
V L + +S GM +R +A A++ P+++FLDEPT LDP R + E I +K
Sbjct: 132 VGLGGRGGEQLSGYSKGMLQRCGLAGAILARPQLVFLDEPTSALDPIGRVEVREIIERLK 191
Query: 182 EEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVGNDIIYLKLESPKEE 241
E + +FL +H + E EQ+ DR+A + G+++ +G+ EL + G + ++++ E
Sbjct: 192 GE-GVAVFLNSHLLSEVEQVCDRVAFVKAGRVLQQGSMREL--MGGVIPVSVRVDRLTSE 248
Query: 242 LKCLKADF--IRGCKLLPDGRVRIDVENATEA-LPKLFELAQKNNVKILEVTYHRPTLND 298
L+ I GR +D+ +EA +P + ++ +T RP L
Sbjct: 249 LRAALQGIGEIHREDTNTPGRADLDLWLQSEAQVPAVAAAIHAAGAQLYALTPRRPDLES 308
Query: 299 VFLHLTGREIRDEEGG 314
+FL L GG
Sbjct: 309 LFLELIEGPAGHAHGG 324
>gb|AAF44814.1|AE003406_19 (AE003416) symbol=BG:DS00797.5; prediction=method:''genscan'',
version:''1.0; Date run: 19-Nov-98; Time: 17:00:23'',
score:''296.08''; cDNA=method:''sim4'', score:''990.0'',
desc:''CK01017 Drosophila melanogaster embryo BlueScript,
full length mRNA seq>
Length = 1544
Score = 146 bits (366), Expect = 2e-34
Identities = 86/245 (35%), Positives = 141/245 (57%), Gaps = 8/245 (3%)
Query: 2 YAIEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAI 61
+++ V NL K+YGD AV G+SF +GE F LG NGAGKT+T ++ L G
Sbjct: 1200 HSLIVHNLRKRYGDKLAVDGVSFAAAQGECFGLLGVNGAGKTSTFQMIAANLPLDGGTIR 1259
Query: 62 VAGHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGR------ELKEKI 115
+ G D+ + + R+ G Q +L++ +TA + +Y ++ GL R KE +
Sbjct: 1260 IKGADIREHELKYREYFGYCPQYDALNKFMTAEQCLYYMALLRGLSRRRTDGPASCKEHV 1319
Query: 116 EELLKFVELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWE 175
+ L+ + L +++ V+++SGG +R+L A A+I P ++ LDEPT G+DP +R +W+
Sbjct: 1320 KYWLEKMHLTKYQKVQVRHYSGGTKRKLLAAMAMIGAPALVLLDEPTTGVDPISRRFLWQ 1379
Query: 176 YIRTMKEEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVGNDIIYLKL 235
I+ + + + T+ LT+H MDE E+L +R+AI+ HGK LK+L G I LK+
Sbjct: 1380 CIKDFQGK-DRTVVLTSHSMDECEELCNRLAIMAHGKFKCLNNICALKRLSG-FTIKLKM 1437
Query: 236 ESPKE 240
++ E
Sbjct: 1438 KADTE 1442
Score = 112 bits (278), Expect = 5e-24
Identities = 72/230 (31%), Positives = 120/230 (51%), Gaps = 9/230 (3%)
Query: 2 YAIEVENLVKKYG----DFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTS 57
+AI + L KK+ D ++ + EI LG NGAGKTT ++++ L+ S
Sbjct: 406 HAIIITELCKKFQTSKRDTLISDNLNMTINNKEITVLLGHNGAGKTTMMNMIMGLVPKDS 465
Query: 58 GKAIVAGHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEE 117
GK IV ++ R IG Q +T ++++ + G + ++ +E
Sbjct: 466 GKIIVCSE---RDVASYRHLIGFCPQHSVFMSYMTCHQHLEFFAQLRGACRSDARDWADE 522
Query: 118 LLKFVELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYI 177
LK + L ++ K SGGM+RRL + A+ +I+ LDEP+ GLD +R +W+ +
Sbjct: 523 KLKKLGLSDKRNEFGKNLSGGMKRRLSLGIAIAGNTKIVILDEPSSGLDINSRRELWDIL 582
Query: 178 RTMKEEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVG 227
+++ E + +TTHYM+EAE L D I I+ +GK+ + G+ ELK+ G
Sbjct: 583 LNLRK--EKAVLVTTHYMEEAEVLGDTICILANGKLQSIGSPLELKRKSG 630
>emb|CAB95908.1| (AL359988) putative ABC transport system ATP-binding protein
[Streptomyces coelicolor A3(2)]
Length = 263
Score = 146 bits (366), Expect = 2e-34
Identities = 80/224 (35%), Positives = 134/224 (59%), Gaps = 7/224 (3%)
Query: 3 AIEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAIV 62
A+ V+ L K++G AV G+ ++ G+ +GPNGAGKTTT+ ++T LL+P G V
Sbjct: 11 AVRVQGLWKRFGQQVAVGGVDLELPAGKFIGLVGPNGAGKTTTLSMVTGLLRPDQGTVEV 70
Query: 63 AGHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKFV 122
GHDV ++P EV+ +IG++ + L L+ E + G + GL G E+ ++ +LL +
Sbjct: 71 VGHDVWRDPVEVKARIGVLPEGLRLFERLSGRELLGYTGRLRGLPGDEVDKRATQLLDVL 130
Query: 123 ELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMKE 182
+L + + V +S GM++++ +A AL+H PE+LFLDEP G+DP + + IR + E
Sbjct: 131 DLAGAQHKLVVDYSTGMRKKIGLAAALLHNPEVLFLDEPFEGVDPVSA----QTIRGVLE 186
Query: 183 EHE---MTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELK 223
+ T+ ++H M+ E L D +A++ G+I A GT E++
Sbjct: 187 RYTASGATVVFSSHVMELVESLCDWVAVMAAGRIRATGTLAEVR 230
>gi|7524830 sulfate transport system permease protein [Chlorella vulgaris]
>gi|3023607|sp|P56344|CYSA_CHLVU PROBABLE SULFATE
TRANSPORT ATP-BINDING PROTEIN CYSA
>gi|7442559|pir||T07260 sulfate transport ATP-binding
protein - Chlorella vulgaris chloroplast
>gi|2224423|dbj|BAA57907.1| (AB001684) sulfate transport
system permease protein [Chlorella vulgaris]
Length = 236
Score = 146 bits (365), Expect = 3e-34
Identities = 79/220 (35%), Positives = 130/220 (58%), Gaps = 1/220 (0%)
Query: 3 AIEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAIV 62
+I +EN+ K++G F A+ ++ ++K G + LGP+G+GK+T + VL L KP SG+ +
Sbjct: 2 SILIENISKRFGSFQALDRVNLEIKNGSLVGLLGPSGSGKSTLLRVLAGLEKPDSGRIWL 61
Query: 63 AGHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKFV 122
G D + + R+ IG VFQ+ +L LT EN+ I + K+++ ELLK +
Sbjct: 62 EGQDATQMKLQDRE-IGFVFQNYALFPHLTVSENVAFGLEIQKIDSLLKKKRVNELLKLM 120
Query: 123 ELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMKE 182
+L +F D SGG ++R+ +ARAL EP++L LDEP LD + R + ++R +
Sbjct: 121 QLEKFGDSYPNQLSGGQRQRVALARALAMEPKVLLLDEPFAALDAKIRKQLRSWLRELHH 180
Query: 183 EHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEEL 222
+ +T TH EA +LA I ++++GKII G+++EL
Sbjct: 181 KISVTTVFVTHDYSEAMELAQEIVLLENGKIIQIGSAQEL 220
>pir||H70682 probable cysA - Mycobacterium tuberculosis (strain H37RV)
>gi|1655663|emb|CAB03729.1| (Z81368) cysA [Mycobacterium
tuberculosis]
Length = 351
Score = 145 bits (363), Expect = 5e-34
Identities = 85/235 (36%), Positives = 132/235 (56%), Gaps = 11/235 (4%)
Query: 2 YAIEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAI 61
YAI V + K+YGDF A+ + F V G + A LGP+G+GK+T + + L +P +G
Sbjct: 3 YAIVVADATKRYGDFVALDHVDFVVPTGSLTALLGPSGSGKSTLLRTIAGLDQPDTGTIT 62
Query: 62 VAGHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGR-----ELKEKIE 116
+ G DV + P + R+ IG VFQ + + LT +N+ +GLK R E+K K++
Sbjct: 63 INGRDVTRVPPQ-RRGIGFVFQHYAAFKHLTVRDNV-----AFGLKIRKRPKAEIKAKVD 116
Query: 117 ELLKFVELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEY 176
LL+ V L F+ R SGG ++R+ +ARAL +PE+L LDEP LD + R + +
Sbjct: 117 NLLQVVGLSGFQSRYPNQLSGGQRQRMALARALAVDPEVLLLDEPFGALDAKVREELRAW 176
Query: 177 IRTMKEEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVGNDII 231
+R + +E +T L TH EA +ADRIA++ G+I G+ ++ N +
Sbjct: 177 LRRLHDEVHVTTVLVTHDQAEALDVADRIAVLHKGRIEQVGSPTDVYDAPANAFV 231
>gb|AAC36155.1| (AF003632) PilH [Myxococcus xanthus]
Length = 326
Score = 145 bits (363), Expect = 5e-34
Identities = 91/298 (30%), Positives = 158/298 (52%), Gaps = 7/298 (2%)
Query: 18 AVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAIVAGHDVVKEPQEVRKK 77
A++G+ ++ G+++ LGPNGAGK+TT+ +L L++ + G+A++ G + VR++
Sbjct: 34 ALQGLDLEIAPGQVYGLLGPNGAGKSTTIKILMGLVRASEGQALLFGEP--PDRPHVRRQ 91
Query: 78 IGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKFVELWRFKDRPVKYFSG 137
+G + ++PSL LT E + + G I+GL G EL +++E +L V + R D ++ +S
Sbjct: 92 VGFLPENPSLYEYLTGREFVTLAGRIFGLSGHELDQRVERVLGDVGMGRASDLQIRRYSK 151
Query: 138 GMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMKEEHEMTIFLTTHYMDE 197
GM +R +A+ALI P +L LDEPT GLDP R + + I + + TI TH + +
Sbjct: 152 GMVQRTALAQALISGPRLLVLDEPTSGLDPLGRRQMRDLILAERAK-GTTILFCTHIISD 210
Query: 198 AEQLADRIAIIDHGKIIAEGTSEELKKLVGNDIIYLKLESPKEELKCLKADFIRGCKLLP 257
E L DR+ ++ G+ + EG+ ++L + + P E L+ L + +L
Sbjct: 211 VESLCDRVVVLVGGRRVQEGSVQDLVSAKAPSVEMVVHGLPLEVLQSLGFSYEHAQQL-- 268
Query: 258 DGRVRIDVENATEALPKLFELAQKNNVKILEVTYHRPTLNDVFLHLTGREIRDEEGGE 315
D RV + + +A L + ++ V R +L D+FL + GGE
Sbjct: 269 DSRVLLRIPDADS--HGLLQTVISKGGRVSRVQPARFSLEDLFLEAMKQAGGQTVGGE 324
>pir||G82707 ABC transporter ATP-binding protein XF1223 [imported] - Xylella
fastidiosa (strain 9a5c)
>gi|9106199|gb|AAF84033.1|AE003956_3 (AE003956) ABC
transporter ATP-binding protein [Xylella fastidiosa]
Length = 310
Score = 145 bits (363), Expect = 5e-34
Identities = 99/309 (32%), Positives = 160/309 (51%), Gaps = 17/309 (5%)
Query: 3 AIEVENLVKKYGDFT-AVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAI 61
A+ V NL K Y + T A+KGIS + G+ FA LGPNGAGK+T + ++++L+ +SG
Sbjct: 10 ALHVYNLHKTYSNGTQALKGISLDITPGDFFALLGPNGAGKSTLISIVSSLVNLSSGSVE 69
Query: 62 VAGHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKF 121
V G D+V+E + IG+V Q+ + + + + + YG+ + + E LK
Sbjct: 70 VFGIDLVRERSAAIRLIGLVPQEINFNLFEKPLDILINYAGFYGIPYAKAEALAEIELKR 129
Query: 122 VELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMK 181
LW + SGGM+RRL IARA++ +P +L LDEPT G+D + R +W ++ +
Sbjct: 130 AHLWEKAQVMSRTLSGGMKRRLMIARAMMTQPRLLILDEPTAGVDVEIRRDMWRVLQEI- 188
Query: 182 EEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVGNDIIYLKLES---- 237
+ TI LTTHY++EAE L +AII+ G+II +G L + + L ++
Sbjct: 189 NANGTTIMLTTHYLEEAESLCRNLAIINGGQIIEKGPMRTLLAKLDVEGFLLDIDGTLPA 248
Query: 238 --PKEELKCLKADFIRGCKLLPDGRVRIDVENATEALPKLFELAQKNNVKILEVTYHRPT 295
P E L A L D + + + A + L +F N+++ +
Sbjct: 249 QLPSIEDTTLNA--------LDDHTLDLSMPRAMD-LNHVFAALSAANIQVRSMRTKSNR 299
Query: 296 LNDVFLHLT 304
L ++F+ LT
Sbjct: 300 LEELFIRLT 308
>pir||H72301 ABC transporter, ATP-binding protein - Thermotoga maritima (strain
MSB8) >gi|4981596|gb|AAD36131.1|AE001765_10 (AE001765)
ABC transporter, ATP-binding protein [Thermotoga
maritima]
Length = 236
Score = 145 bits (362), Expect = 7e-34
Identities = 82/224 (36%), Positives = 130/224 (57%), Gaps = 3/224 (1%)
Query: 1 MYAIEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKA 60
M + ENL K++G V G++ + +GEI LGPNGAGKTT +++ ++ PTSGK
Sbjct: 1 MDVLRCENLKKRFGRRYVVNGVNLEFHRGEIVGLLGPNGAGKTTIFNMILGVVVPTSGKI 60
Query: 61 IVAGHDVVKEPQEVRKKIGIVF--QDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEEL 118
I D+ K P R ++GI + Q+ S+ LT EN+ + + + + KIEEL
Sbjct: 61 IFRDVDITKFPVYRRARLGITYLQQETSIFGGLTVRENIDLVLRFHEKDKEKRERKIEEL 120
Query: 119 LKFVELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIR 178
L L +++P + SGG +R+LE+AR + P + LDEP G+DP+T I +
Sbjct: 121 LHEFHLKHLENQPASFLSGGEKRKLELARMMCLNPAFILLDEPFSGIDPKTVKEIQKMTL 180
Query: 179 TMKEEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEEL 222
+K+++ I +T H +DE ++ADRI +I G+I+AEG+ E +
Sbjct: 181 ELKQKN-FGIVITDHNVDELVEIADRIYVIYKGEILAEGSPERI 223
>pir||T47150 hypothetical protein DKFZp547P193.1 - human (fragment)
>gi|7328111|emb|CAB82398.1| (AL162060) hypothetical
protein [Homo sapiens]
Length = 373
Score = 145 bits (361), Expect = 9e-34
Identities = 94/312 (30%), Positives = 168/312 (53%), Gaps = 8/312 (2%)
Query: 12 KYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAIVAGHDVVKEP 71
K G AV + V+ GE F LG NGAGKT+T +LT T G+A V GH V+KE
Sbjct: 1 KIGRILAVDRLCLGVRPGECFGLLGVNGAGKTSTFKMLTGDESTTGGEAFVNGHSVLKEL 60
Query: 72 QEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKFVELWRFKDRP 131
+V++ +G Q +L ELTA E++ ++ + G+ ++ ++ L+ +EL ++ D+P
Sbjct: 61 LQVQQSLGYCPQCDALFDELTAREHLQLYTRLRGISWKDEARVVKWALEKLELTKYADKP 120
Query: 132 VKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMKEEHEMTIFLT 191
+SGG +R+L A ALI P +FLDEPT G+DP+ R +W I + + ++ LT
Sbjct: 121 AGTYSGGNKRKLSTAIALIGYPAFIFLDEPTTGMDPKARRFLWNLILDLIKTGR-SVVLT 179
Query: 192 THYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVGNDIIYLKLESPKEELKCLKADFIR 251
+H M+E E L R+AI+ +G++ G+ + LK G+ + + +K + F R
Sbjct: 180 SHSMEECEALCTRLAIMVNGRLRCLGSIQHLKNRFGDGYMITVRTKSSQSVKDVVRFFNR 239
Query: 252 G-----CKLLPDGRVRIDVENATEALPKLFELAQKNN--VKILEVTYHRPTLNDVFLHLT 304
K +V+ +++ +L ++F ++ + + I + + + TL++VF++
Sbjct: 240 NFPEAMLKERHHTKVQYQLKSEHISLAQVFSKMEQVSGVLGIEDYSVSQTTLDNVFVNFA 299
Query: 305 GREIRDEEGGES 316
++ + E E+
Sbjct: 300 KKQSDNLEQQET 311
>gb|AAC44025.1| (U47133) NosF protein [Sinorhizobium meliloti]
>gi|1588788|prf||2209347D nosF gene [Rhizobium meliloti]
Length = 304
Score = 144 bits (360), Expect = 1e-33
Identities = 98/300 (32%), Positives = 158/300 (52%), Gaps = 9/300 (3%)
Query: 4 IEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAIVA 63
+E+ + K YGD T V+ ISF + E A +G NGAGKTT + ++ L++PT G V
Sbjct: 5 VEIAGVSKCYGDSTVVRDISFGLGAAETVALVGHNGAGKTTLIKLMLGLIRPTKGLVRVL 64
Query: 64 GHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKFVE 123
G + VR+++G + + S + LT E + + + + G + E + E
Sbjct: 65 GENPATGDFAVRQRLGYLPESVSFNMALTGRETLRFYARLKQVDGAATGDLFERVGLAQE 124
Query: 124 LWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMKEE 183
DRPV+ +S GM++RL +A+AL+ P IL LDEPT GLDP R + +E I ++ +
Sbjct: 125 A---VDRPVRTYSKGMRQRLGLAQALLGMPRILLLDEPTSGLDPALRRNFYELITELRAK 181
Query: 184 HEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVGNDI-IYLKLESPKEEL 242
T+ L++H + E E ADR+ I++ G IA+GT E+L+++ I LKL
Sbjct: 182 -GTTVLLSSHALTELEGRADRVIIVNKGVKIADGTLEQLRRIARLPTRISLKLSQAGATP 240
Query: 243 KCLKADFIRGCKLLPDGRVRIDVENATEALPKLFELAQKNNVKILEVTYHRPTLNDVFLH 302
L ++ C+ PDG V D E +++ L + + +T PTL+D++ H
Sbjct: 241 AWLNGG-MKWCR-GPDGAV--DAEVSSDRKIALLHDITSDAALLSGLTITEPTLDDLYAH 296
>pir||H71006 probable ATP-binding transport protein - Pyrococcus horikoshii
>gi|3257773|dbj|BAA30456.1| (AP000006) 330aa long
hypothetical ATP-binding transport protein [Pyrococcus
horikoshii]
Length = 330
Score = 144 bits (359), Expect = 2e-33
Identities = 79/222 (35%), Positives = 131/222 (58%), Gaps = 3/222 (1%)
Query: 1 MYAIEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKA 60
M +IE+ +++K++G+F +S VK GE+ LGP+G GKTTT+ ++ L KP G+
Sbjct: 1 MVSIELRDIIKRFGEFELK--VSLSVKDGELLTLLGPSGCGKTTTLRIIAGLEKPDKGRV 58
Query: 61 IVAGHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLK 120
G D+ P R IG+VFQD +L +T ++N+ + + E+++++ E+L
Sbjct: 59 YFDGRDITDLPPYERN-IGLVFQDYALFPHMTVFKNVAFGLEVRRVPRMEIEKRVREVLD 117
Query: 121 FVELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTM 180
V L F++R + SGG Q+R+ +ARAL+ EP++L LDEP LD + R + I+ +
Sbjct: 118 LVGLRGFENRLPEELSGGQQQRVALARALVIEPDVLLLDEPLSNLDAKVREKLRGEIKRI 177
Query: 181 KEEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEEL 222
+E +T TH +EA L+DRIA+++ G+I G +L
Sbjct: 178 VKELGITTIYVTHDQEEAMVLSDRIAVMNFGRIEQVGEPYDL 219
>gb|AAD16030.1| (AF082183) ABC transporter MutF [Streptococcus mutans]
Length = 302
Score = 144 bits (359), Expect = 2e-33
Identities = 92/302 (30%), Positives = 162/302 (53%), Gaps = 8/302 (2%)
Query: 4 IEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAIVA 63
+ + NL K +G+ + ++ + GEI+ FLG NGAGK+T + ++ LL SG+ +
Sbjct: 6 LSINNLSKSFGNQKVLDHLNMTISPGEIYGFLGVNGAGKSTAMKIILGLLPKDSGEIVAL 65
Query: 64 GHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKFVE 123
G + + ++ +IG + ++P+ LT +EN+ + + L K+ I+ +++
Sbjct: 66 GRPLPENRSQILPEIGALIEEPAFYPNLTGFENLQLIQELANLP----KDNIKVVMEATG 121
Query: 124 LWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMKEE 183
++ KD+ V+ +S GM++RL I+ ALI P+ L LDEPT GLDP + + IR++ ++
Sbjct: 122 IYYAKDKLVRNYSLGMKQRLGISMALIKFPKFLILDEPTNGLDPDGIHQMRQLIRSLPQK 181
Query: 184 HEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVGNDIIYLKLESPKEELK 243
MTI +++H + E E LAD + II G +I EG +L L LK+ + ++ +
Sbjct: 182 FNMTILISSHILSEIENLADTVGIIKDGHLIYEGGINQL--LNQEQKYQLKVNNLEKAAQ 239
Query: 244 CLK-ADFIRGCKLLPDGRVRIDVENATEALPKLFELAQKNNVKILEVTYHRPTLNDVFLH 302
++ D G D + I + + T +P L N ++I E+ + TL VFL
Sbjct: 240 IIQHYDNKIGIVKNDDDILLISLPDCT-LVPDLIAQLVYNELQIYEIYGVKKTLESVFLD 298
Query: 303 LT 304
LT
Sbjct: 299 LT 300
>gb|AAG20473.1| (AE005119) copper transport ATP-binding protein; NosF1
[Halobacterium sp. NRC-1]
Length = 304
Score = 144 bits (359), Expect = 2e-33
Identities = 77/224 (34%), Positives = 132/224 (58%), Gaps = 6/224 (2%)
Query: 1 MYAIEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKA 60
M AIE+ + K+YGD TA+ ++ V +GEI+ FLGPNGAGK+T +++L ++PT+G A
Sbjct: 1 MPAIELSGVSKRYGDVTALTDLNITVDEGEIYGFLGPNGAGKSTAINILLDFVRPTTGSA 60
Query: 61 IVAGHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLK 120
+ G+D + Q +R++IG++ + S+ LTA +++ + + + + LL
Sbjct: 61 TILGYDAQADSQAIRQRIGVLPEGFSVYDRLTARKHVE-----FAIDSKNATNDPDALLD 115
Query: 121 FVELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTM 180
V + DR FS GM++RL +A AL+ +PE+L LDEP+ GLDP A I T
Sbjct: 116 RVGIPEAADRKAGGFSTGMRQRLGLAIALVGDPEMLLLDEPSSGLDP-NGAREMRSILTE 174
Query: 181 KEEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKK 224
+ T+F ++H + + E + D I+ +G ++AE + + L++
Sbjct: 175 EANRGTTVFFSSHILGQVEAICDHAGILQNGTLVAEDSIDALRE 218
>pir||T45265 cobalt transport ATP-binding protein O homolog [imported] -
Methanobacterium thermoautotrophicum
>gi|1419078|emb|CAA63958.1| (X94292) cbiO
[Methanobacterium thermoautotrophicum]
Length = 277
Score = 143 bits (358), Expect = 2e-33
Identities = 93/225 (41%), Positives = 136/225 (60%), Gaps = 11/225 (4%)
Query: 1 MYAIEVENLVKKYGDFT-AVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGK 59
M IE N+ Y D T A+KGI F KKGE+ A LGPNGAGK+T +L+PTSGK
Sbjct: 1 MKIIEAVNIRYTYPDGTEALKGIDFHAKKGEVVALLGPNGAGKSTLFLHFNGILQPTSGK 60
Query: 60 AIVAGHDVVKEPQ---EVRKKIGIVFQDPSLDRELTA---YENMYIHGMIYGLKGRELKE 113
+V G ++ +VR+K+GIVFQ+P D +L A E++ + GL E++E
Sbjct: 61 VLVDGKEIDYSKSGLIKVRQKVGIVFQNP--DDQLFAPRVDEDVAFGPLNMGLDEDEVEE 118
Query: 114 KIEELLKFVELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHI 173
++++ L+ V + + P + SGG ++R+ IA L +P+I+ LDEPT GLDP+ + I
Sbjct: 119 RVKDALRKVGMSGTRTDP-HHLSGGEKKRVAIAGILAMKPDIMILDEPTSGLDPRGASQI 177
Query: 174 WEYIRTMKEEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGT 218
+ + EE MTI ++TH +D A +DRI II G+II+EGT
Sbjct: 178 LRLLHELNEE-GMTIIISTHDVDLAPLYSDRIYIISGGEIISEGT 221
>gb|AAF99691.1|AF267498_1 (AF267498) MutF [Streptococcus mutans]
Length = 233
Score = 143 bits (358), Expect = 2e-33
Identities = 83/227 (36%), Positives = 135/227 (58%), Gaps = 11/227 (4%)
Query: 2 YAIEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAI 61
Y +E +NL K++G TAV ++ KV++ I+ LGPNG+GK+TT+ ++T +L+ TSG +
Sbjct: 3 YMLETKNLTKQFGKQTAVNQLNLKVERHSIYGLLGPNGSGKSTTLKMITGMLRKTSGHIL 62
Query: 62 VAGHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKF 121
+ GHD ++ E IG + + P L LTA EN+ + ++ GL +I+E+LK
Sbjct: 63 IDGHDWSRKDLE---NIGALIESPPLYENLTARENLKVRTLMLGLP----DSRIDEVLKI 115
Query: 122 VELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMK 181
V+L + FS GM++RL IA AL++ P++L LDEPT GLDP + IR+
Sbjct: 116 VDLTNTGKKRAGQFSMGMKQRLGIAIALLNSPQLLILDEPTNGLDPIGIQELRNLIRSFP 175
Query: 182 EEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEG---TSEELKKL 225
+ +T+ +++H + E + AD I II +G + + E+L+KL
Sbjct: 176 TQ-GITVIISSHILSEIQMTADHIGIIANGVLGYQDRIHQDEDLEKL 221
>pir||T36316 probable ABC-type transport system ATP-binding protein -
Streptomyces coelicolor >gi|4490633|emb|CAB38595.1|
(AL035654) putative ABC transporter ATP-binding protein
[Streptomyces coelicolor A3(2)]
Length = 317
Score = 142 bits (355), Expect = 5e-33
Identities = 99/324 (30%), Positives = 179/324 (54%), Gaps = 24/324 (7%)
Query: 4 IEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAIVA 63
I ++ L K+YGD TAV +SF++ G++ FLGPNGAGK+TT+ ++ L PTSG+A+V
Sbjct: 2 ITLDRLTKRYGDKTAVSDLSFEINPGKVTGFLGPNGAGKSTTMRMIVGLDAPTSGRALVG 61
Query: 64 GHDVVKEPQEVR---KKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLK 120
G K +E+R +++G + + +A ++ G+ ++ E+L+
Sbjct: 62 G----KRYEELRHPLREVGALLDARAGHPGRSARHHLLGLARSNGIPA----SRVGEVLQ 113
Query: 121 FVELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTM 180
V L ++ + FS GM +RL IA AL+ +P++L DEP GLDP + E +R++
Sbjct: 114 TVGLSEVANKRIGSFSLGMGQRLGIAAALLGDPKVLLFDEPVNGLDPDGVRWVRELMRSL 173
Query: 181 KEEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVGNDIIYLKLESPKE 240
E TIF+++H M E ++ AD + +I GKIIA+ EE+ + G+ + +++ +P+
Sbjct: 174 AAEGR-TIFVSSHLMSEMQETADHLLVIGRGKIIADAPIEEV--IAGSSLTAVRVRTPQP 230
Query: 241 ELKCLKADFIR-GCKLLPDGRVRID---VENATEALPKLFELAQKNNVKILEVTYHRPTL 296
++ L+ + + G ++ P+ D V T L ++ +LA + V I E++ + +L
Sbjct: 231 DV--LRRELLEFGLRVEPNADSAPDELLVVGGT--LEEIGDLAFHHRVPIHELSMRKASL 286
Query: 297 NDVFLHLTGREIRDEEGGESFARV 320
++ LT + E G + ++V
Sbjct: 287 EQAYMELTAASV--EYGSPALSQV 308
>pir||G75169 abc transporter ATP-binding protein PAB0350 - Pyrococcus abyssi
(strain Orsay) >gi|5457948|emb|CAB49438.1| (AJ248284)
ABC TRANSPORTER ATP-BINDING PROTEIN [Pyrococcus abyssi]
Length = 260
Score = 142 bits (355), Expect = 5e-33
Identities = 85/228 (37%), Positives = 131/228 (57%), Gaps = 12/228 (5%)
Query: 2 YAIEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAI 61
Y IE ENL Y AV+G++FK+KKGE LGPNGAGKTT + VL L GK +
Sbjct: 3 YVIEAENLTIMYDSVKAVEGLTFKLKKGETLLLLGPNGAGKTTLLRVLAGLHTNYQGKIL 62
Query: 62 VAGHDVVKEPQEVRKKIGIVFQDPSLD-------RELTAYENMYIHGMIYGLKGRELKEK 114
V G K P EVR+K+ V Q SL+ ++ + +Y G+I+ +E+ ++
Sbjct: 63 VFG----KSPSEVREKVAYVPQTFSLNFRVPLSVLDVVSMGGLYKKGLIHFNIPQEVIKR 118
Query: 115 IEELLKFVELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIW 174
E+L F+ L + + SGG ++R+ IARAL+ PE+L LDEP LDP+ R
Sbjct: 119 GLEILDFLGLKEIAKKSFRELSGGQKQRVIIARALMSNPELLLLDEPLSALDPKARIEAT 178
Query: 175 EYIRTMKEEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEEL 222
+ +KE+ +T+ +TTH ++ ++ D++ +ID K++A G+ EE+
Sbjct: 179 STLSKIKEDMGITMIITTHDVNPLIEIGDKVMLIDR-KLVAFGSPEEV 225
>pir||E81337 ABC-transporter ATP-binding protein Cj0669 [imported] -
Campylobacter jejuni (strain NCTC 11168)
>gi|6968131|emb|CAB72946.1| (AL139076) ABC-transporter
ATP-binding protein [Campylobacter jejuni]
Length = 242
Score = 142 bits (355), Expect = 5e-33
Identities = 79/224 (35%), Positives = 130/224 (57%), Gaps = 3/224 (1%)
Query: 1 MYAIEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKA 60
M +E+ NL K + GIS +V GE+ LGPNGAGKTTT +++ L+ P+SGK
Sbjct: 1 MSKLEIVNLEKIIKKTKIIHGISLEVNSGEVVGLLGPNGAGKTTTFYMICGLISPSSGKV 60
Query: 61 IVAGHDVVKEP--QEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEEL 118
++ G DV K+P + R IG + Q+ S+ ++L+ +N+ + I+ + L +K+E++
Sbjct: 61 LLDGLDVTKDPLNKRARSGIGYLPQESSIFKDLSVEDNLLLAAQIFYKDKKILHDKVEQM 120
Query: 119 LKFVELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIR 178
L+ + + + R SGG +RR EIAR+L+ EP+ L LDEP G+DP A I I+
Sbjct: 121 LELLSIEPIRLRKGLSLSGGERRRCEIARSLMCEPKFLLLDEPFAGVDPIAVAEIQTLIK 180
Query: 179 TMKEEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEEL 222
+K + + +T H + E + DR +I G ++A G ++E+
Sbjct: 181 ELK-RLGIGVLITDHNVRETLAICDRAYVIRSGSLLASGNADEI 223
>pir||G69043 cobalt transport ATP-binding protein O - Methanobacterium
thermoautotrophicum (strain Delta H)
>gi|2621173|gb|AAB84639.1| (AE000802) cobalt transport
ATP-binding protein O [Methanobacterium
thermoautotrophicum]
Length = 280
Score = 142 bits (354), Expect = 6e-33
Identities = 86/229 (37%), Positives = 138/229 (59%), Gaps = 10/229 (4%)
Query: 1 MYAIEVENLVKKYGDFT-AVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGK 59
M IE ++ Y D T A++GI+F ++GE+ A LGPNGAGK+T +L+PTSGK
Sbjct: 3 MRIIEAVDIRYTYPDGTEALRGINFHAERGEVVALLGPNGAGKSTLFLHFNGILQPTSGK 62
Query: 60 AIVAGHDVVKEPQ---EVRKKIGIVFQDPSLDRELTAY---ENMYIHGMIYGLKGRELKE 113
++ G ++ + R+K+GIVFQ+P D +L A E++ + GL E++E
Sbjct: 63 IMIDGEELDYSKSGLIKARQKVGIVFQNP--DDQLFAPRVDEDVAFGPLNMGLSEDEVEE 120
Query: 114 KIEELLKFVELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHI 173
++ + L+ V + ++ +P +FSGG ++R+ IA + +P+I+ LDEPT GLDP+ + I
Sbjct: 121 RVRDALQKVGMLGYESKPPHHFSGGEKKRVAIAGIIAMKPDIMVLDEPTSGLDPRGASQI 180
Query: 174 WEYIRTMKEEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEEL 222
+ + EE MTI ++TH +D A +DRI II G+II+ G E+
Sbjct: 181 LRLLHNLNEE-GMTIIISTHDVDLAPLYSDRIYIISDGEIISTGAPSEV 228
>gi|11499200 spermidine/putrescine ABC transporter, ATP-binding protein (potA)
[Archaeoglobus fulgidus] >gi|7445763|pir||G69450
spermidine/putrescine ABC transporter, ATP-binding
protein (potA) homolog - Archaeoglobus fulgidus
>gi|2648948|gb|AAB89638.1| (AE000991)
spermidine/putrescine ABC transporter, ATP-binding
protein (potA) [Archaeoglobus fulgidus]
Length = 345
Score = 141 bits (353), Expect = 8e-33
Identities = 89/269 (33%), Positives = 145/269 (53%), Gaps = 17/269 (6%)
Query: 2 YAIEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAI 61
YA+E+E + K Y T ++ I+ ++++GE F+ LGP+G+GKTT + ++ L P G
Sbjct: 4 YAVELEGISKSYDSTTVLEDINLRIQQGEFFSLLGPSGSGKTTIIRIIAGLTFPDQGFVR 63
Query: 62 VAGHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGR-----ELKEKIE 116
+ G D P R+ +G+VFQ+ +L L +EN+ YGL+ R E+K+++
Sbjct: 64 INGEDCTSLPP-YRRNVGMVFQNLALFPHLNVFENV-----AYGLRLRKIPEGEIKDRVY 117
Query: 117 ELLKFVELWR--FKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIW 174
L+ V L + R V+ SGG Q+R+ IARAL+ EP IL LDEP LD + R H+
Sbjct: 118 RYLELVNLDPEIYAKRKVEQLSGGQQQRVAIARALVTEPSILLLDEPLGALDLKIRQHMI 177
Query: 175 EYIRTMKEEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVGNDIIYLK 234
++ +++ T TH EA L+DR+A+++ G+I GT E+ + +
Sbjct: 178 SELKRIQKTLGTTFIYVTHDQSEALLLSDRLAVLNEGRIHQIGTPREIYERPKTRFV--- 234
Query: 235 LESPKEELKCLKADFIRGCKLLPDGRVRI 263
S E L+A + G + G+VR+
Sbjct: 235 -ASFIGETNFLEARVVNGEVITEIGKVRV 262
>pir||G81344 ABC transport system ATP-binding protein Cj0732 [imported] -
Campylobacter jejuni (strain NCTC 11168)
>gi|6968189|emb|CAB73006.1| (AL139076) ABC transport
system ATP-binding protein [Campylobacter jejuni]
Length = 329
Score = 141 bits (353), Expect = 8e-33
Identities = 97/310 (31%), Positives = 165/310 (52%), Gaps = 20/310 (6%)
Query: 1 MYAIEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKA 60
M ++++N K YGD + I+F KKGE LGP+G GK+T + + L + GK
Sbjct: 1 MAYLKIKNFKKAYGDKIIFEDINFSAKKGEFITLLGPSGCGKSTLLRCIAGLSQINGGKI 60
Query: 61 IVAGHDVVK-EPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELL 119
+ D+ K PQ ++ IG+VFQ+ +L L +EN+ I + ++++++++++L
Sbjct: 61 SLNDKDLTKLSPQ--KRNIGMVFQNYALFPNLNVFENVAFGLKIKKMDKKDIEKRVKKML 118
Query: 120 KFVELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRT 179
K VEL + SGG +R+ +AR+L+ +P++L LDEP LD + R ++ I+
Sbjct: 119 KLVELEEYAKTYPHKLSGGQMQRVALARSLVIKPDLLLLDEPLSALDAKIRKYLRVQIKE 178
Query: 180 MKEEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKL-----VGNDIIYLK 234
+++E E+T TH +EA +L+D I +++ GKII + L L V + I
Sbjct: 179 IQKELELTTIFVTHDQEEALELSDTIILMNEGKIIQNSNANNLYLLPESHFVASFIGNYN 238
Query: 235 LESPKE-ELKCLKADFIRGCKLLPDGRVRIDVENATEAL-PKLFELAQKNN-----VKIL 287
+ SPKE + LK DF + L P+ +E + E L K+ E + N V++
Sbjct: 239 ILSPKELDSLGLKHDFKKDIALRPE-----TIEISNEGLEAKIKEKSLLGNIIRYRVRVQ 293
Query: 288 EVTYHRPTLN 297
E+ + TLN
Sbjct: 294 EIEFKVDTLN 303
>emb|CAB94564.1| (AL359152) putative ABC transporter ATP-binding subunit
[Streptomyces coelicolor A3(2)]
Length = 423
Score = 141 bits (353), Expect = 8e-33
Identities = 92/307 (29%), Positives = 162/307 (51%), Gaps = 18/307 (5%)
Query: 4 IEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAIVA 63
IE L K+YGD TAV +SF+V+ G + FLGPNG+GK+TT+ ++ L PT+G +
Sbjct: 2 IEAVGLTKRYGDKTAVYNLSFQVRPGAVTGFLGPNGSGKSTTMRMILGLDNPTAGHVTIG 61
Query: 64 GHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKFVE 123
GH + P R +G + ++ A ++ + G+ R +++E+L V
Sbjct: 62 GHPYRRLPNAAR-HVGALLDAKAVHGGRAARNHLLSLAQLSGIPAR----RVDEVLGVVG 116
Query: 124 LWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMKEE 183
L R K FS GM +RL IA AL+ +P++L DEP GLDP+ + ++ + E
Sbjct: 117 LQDVAKRRSKGFSLGMGQRLGIAAALLGDPQVLLFDEPVNGLDPEGIHWVRNLMKALAAE 176
Query: 184 HEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVGNDIIYLKLESPKEE-- 241
T+F+++H M E AD + +I G+++A+ + + + N + ++ +P E
Sbjct: 177 GR-TVFVSSHLMSEMALTADHLIVIGRGQLMADMSVTDF--ISANSADFARVRTPDTEPQ 233
Query: 242 --LKCLKADFIRGCKLLP--DGRVRIDVENATEALPKLFELAQKNNVKILEVTYHRPTLN 297
K A G +LP DG +R+ ALP++ ++A +V++ E++ H+ +L
Sbjct: 234 LREKLTSALTEAGGHVLPEQDGALRV----TGLALPRISDIAHDTDVRLWELSPHQASLE 289
Query: 298 DVFLHLT 304
+ ++ +T
Sbjct: 290 EAYMRMT 296
>emb|CAB94566.1| (AL359152) putative ABC transporter ATP-binding subunit
[Streptomyces coelicolor A3(2)]
Length = 346
Score = 141 bits (352), Expect = 1e-32
Identities = 94/307 (30%), Positives = 163/307 (52%), Gaps = 15/307 (4%)
Query: 4 IEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAIVA 63
IE+E L K+YG+ AV +SF V+ G I FLGPNGAGK+TT+ ++ L +PT+G +
Sbjct: 18 IELEGLTKRYGEKVAVNNLSFTVRPGIITGFLGPNGAGKSTTMRMVLGLDRPTAGDVRID 77
Query: 64 G--HDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKF 121
G +D +K+P IG + + + +AY ++ G+ ++ ++L
Sbjct: 78 GKHYDELKDPLTY---IGALLEAKAWHGGRSAYNHLLCLAQSNGIPA----SRVRQVLDT 130
Query: 122 VELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMK 181
V L + K FS GM +RL IA AL+ +P IL DEP GLDP+ I ++T+
Sbjct: 131 VGLSAVARKKTKGFSLGMGQRLGIAGALLGDPRILMFDEPVNGLDPEGIHWIRNLMKTLA 190
Query: 182 EEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVGNDIIYLKLESPKEE 241
+ T+F+++H M E AD + +I G+++A+ + E + N Y+++ +P+ E
Sbjct: 191 SQGR-TVFVSSHLMSEMALTADHLVVIGQGRLLADTSMAEF--IAENSRSYVRIRTPQRE 247
Query: 242 LKCLKADFIRGCKLLPDGRVRIDVENATEALPKLFELAQKNNVKILEVTYHRPTLNDVFL 301
+ L A G ++ G ++V+ + + ELA ++ V + E++ R +L + F+
Sbjct: 248 -QLLDALHAAGVTVVESGEGVLEVDG--DKSETVGELAARHQVVLYELSPQRASLEEAFM 304
Query: 302 HLTGREI 308
LT +
Sbjct: 305 QLTAESV 311
>pir||A75083 ATP-binding transport protein PAB1668 - Pyrococcus abyssi (strain
Orsay) >gi|5458478|emb|CAB49966.1| (AJ248286)
ATP-BINDING TRANSPORT PROTEIN [Pyrococcus abyssi]
Length = 315
Score = 140 bits (350), Expect = 2e-32
Identities = 75/230 (32%), Positives = 130/230 (55%), Gaps = 5/230 (2%)
Query: 2 YAIEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAI 61
Y IE + L K +G V ++ KV KG ++ FLGPNGAGKTTT+ +LT LKPT G+
Sbjct: 4 YIIETKELTKFFGKRNVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALKPTYGEIK 63
Query: 62 VAGHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKF 121
+ G ++ +E ++ + +G + + P ++T +E + G + GL + + EL+ +
Sbjct: 64 IIGMEMPRERVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKDKAVNQARELMAY 123
Query: 122 VELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMK 181
+ R ++ S G ++R+ A AL+ +PE+L LDEPT LDP R E+I +
Sbjct: 124 TGVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGR---MEFIGKIL 180
Query: 182 E--EHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVGND 229
E + T+F+++H + E E++ + + +I G++I +G +L K+ D
Sbjct: 181 ELAKSGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAKIESTD 230
>pir||H83609 sulfate transport protein CysA PA0280 [imported] - Pseudomonas
aeruginosa (strain PAO1)
>gi|9946123|gb|AAG03669.1|AE004466_3 (AE004466) sulfate
transport protein CysA [Pseudomonas aeruginosa]
Length = 329
Score = 140 bits (350), Expect = 2e-32
Identities = 82/236 (34%), Positives = 133/236 (55%), Gaps = 9/236 (3%)
Query: 3 AIEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAIV 62
+IE+ N+ K + F A+ I+ ++ GE+ A LGP+G GKTT + ++ L P +G +
Sbjct: 2 SIEIRNVSKNFNAFKALDDINLDIQSGELVALLGPSGCGKTTLLRIIAGLETPDAGNIVF 61
Query: 63 AGHDVVKEPQEVR-KKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRE-----LKEKIE 116
G DV + +VR + +G VFQ +L R +T ++N+ G+ KG +K K+
Sbjct: 62 HGEDVSQH--DVRDRNVGFVFQHYALFRHMTVFDNVAF-GLRMKPKGERPGESAIKAKVH 118
Query: 117 ELLKFVELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEY 176
ELL V+L DR + SGG ++R+ +ARAL EP+IL LDEP LD + R + +
Sbjct: 119 ELLNMVQLDWLADRYPEQLSGGQRQRIALARALAVEPKILLLDEPFGALDAKVRKELRRW 178
Query: 177 IRTMKEEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVGNDIIY 232
+ + EE +T TH +EA ++ADRI +++ G I G+ E+ + +D +Y
Sbjct: 179 LARLHEEINLTSVFVTHDQEEAMEVADRIVVMNKGVIEQIGSPGEVYENPASDFVY 234
>pir||T15200 hypothetical protein F12B6.1 - Caenorhabditis elegans
>gi|2088709|gb|AAB54153.1| (AF003138) strong similarity
to the ATP-binding transporter family (ABC transporters)
[Caenorhabditis elegans]
Length = 1447
Score = 140 bits (349), Expect = 2e-32
Identities = 91/290 (31%), Positives = 158/290 (54%), Gaps = 11/290 (3%)
Query: 2 YAIEVENLVKKYG-DFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKA 60
+A+ V NL K Y + AVKGISF V+ GE F LG NGAGKTTT +LT ++P G
Sbjct: 1158 HALIVRNLAKAYNPELLAVKGISFAVEPGECFGLLGLNGAGKTTTFAMLTAKIRPGHGSI 1217
Query: 61 IVAGHDV-VKEPQEVR--KKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEE 117
+ + +VR +++G Q +L+ +L+ EN+ + I G+ ++ I+
Sbjct: 1218 EMQNTRINTGSFSDVRNFQQLGYCPQFDALNMKLSTRENLKFYARIRGIVPTQIDSIIDR 1277
Query: 118 LLKFVELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYI 177
LL + L + + SGG +R+L +A AL+ +P ++FLDEP+ G+DP ++ +W+ I
Sbjct: 1278 LLIALHLRPYANTQTSSLSGGNRRKLSVAVALVSQPSLIFLDEPSAGMDPGSQQFLWKVI 1337
Query: 178 RTMKEEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVG-NDIIYLKL- 235
+ + + + LT+H M+E E L RIAI+D G+I G + LK G ++ +K+
Sbjct: 1338 ERLCKSGK-AVVLTSHSMEECEALCTRIAIMDRGRIRCLGGKQHLKSKYGKGSMLTMKMG 1396
Query: 236 --ESPKEELKCLKADFIRGCKL--LPDGRVRIDVENATEALPKLFELAQK 281
E+ KE +++ G ++ + + I +E T ++ ++ E+ +
Sbjct: 1397 KDENAKEIAGIMRSKLGDGSRVEAIHCSTIFIHIEQGTASVARVLEIVNQ 1446
Score = 125 bits (310), Expect = 9e-28
Identities = 73/191 (38%), Positives = 109/191 (56%), Gaps = 2/191 (1%)
Query: 18 AVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAIVAGHDVVKEPQEVRKK 77
A+ ++ ++ +G+I LG NGAGKTTT+ +L L P+SG A + D+ + + VR
Sbjct: 345 ALDCLNLRLYEGQITGLLGHNGAGKTTTMSILCGLYAPSSGTAKIYQRDIRTDLRRVRDV 404
Query: 78 IGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKFVELWRFKDRPVKYFSG 137
+GI Q L LT E + + + G+ EL +++E+L V L ++ SG
Sbjct: 405 LGICPQHNVLFSHLTVSEQLRLFAALKGVPDSELTSQVDEILASVSLTEKANKLASTLSG 464
Query: 138 GMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMKEEHEMTIFLTTHYMDE 197
GM+RRL I A I + LDEPT G+D R IW+ ++ KE TI L+TH+MDE
Sbjct: 465 GMKRRLCIGIAFIGGSRFVILDEPTAGVDVTARKDIWKLLQRNKEGR--TILLSTHHMDE 522
Query: 198 AEQLADRIAII 208
A+ L+DRIAI+
Sbjct: 523 ADVLSDRIAIL 533
>pir||H83240 probable ATP-binding component of ABC transporter PA3254 [imported]
- Pseudomonas aeruginosa (strain PAO1)
>gi|9949377|gb|AAG06642.1|AE004747_15 (AE004747)
probable ATP-binding component of ABC transporter
[Pseudomonas aeruginosa]
Length = 331
Score = 140 bits (349), Expect = 2e-32
Identities = 76/222 (34%), Positives = 124/222 (55%), Gaps = 1/222 (0%)
Query: 1 MYAIEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKA 60
M + VE L K YG + + I F +GE LGP+G GK+T + + L + SG+
Sbjct: 1 MSFVSVEQLDKSYGATSIFRDIDFAAARGEFVTLLGPSGCGKSTLLRCIAGLTEVDSGRI 60
Query: 61 IVAGHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLK 120
++ G DVV P + ++ I +VFQ +L +T +N+ + + ELK+++ E ++
Sbjct: 61 LIDGEDVVPLPPQ-KRGIAMVFQSYALFPNMTVQQNVAFGLRMQKVPAAELKQRVAEAIE 119
Query: 121 FVELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTM 180
VEL + R SGG +R+ +AR+L+ P +L LDEP LD + R H+ E IR +
Sbjct: 120 LVELGEYAARYPHQLSGGQCQRVALARSLVTRPRLLLLDEPLSALDARIRKHLREQIRRI 179
Query: 181 KEEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEEL 222
++E +T TH +EA L+DRI +++ G+I+ G +E L
Sbjct: 180 QQELGLTTVFVTHDQEEALTLSDRIVLMNAGRIVQSGDAETL 221
>pir||E72378 sugar ABC transporter, ATP-binding protein - Thermotoga maritima
(strain MSB8) >gi|4980927|gb|AAD35506.1|AE001721_5
(AE001721) sugar ABC transporter, ATP-binding protein
[Thermotoga maritima]
Length = 359
Score = 139 bits (348), Expect = 3e-32
Identities = 79/222 (35%), Positives = 129/222 (57%), Gaps = 1/222 (0%)
Query: 1 MYAIEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKA 60
M +I V NL K +G AV G+SF+VK GE A LGP+G GKTTT+ +L + KPTSG+
Sbjct: 1 MPSIRVVNLKKYFGKVKAVDGVSFEVKDGEFVALLGPSGCGKTTTLLMLAGIYKPTSGE- 59
Query: 61 IVAGHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLK 120
I +V + +++G+VFQ+ +L +T +EN+ + E+++++ E+ +
Sbjct: 60 IYFDDVLVNDIPPKYREVGMVFQNYALYPHMTVFENIAFPLRARRISKDEVEKRVVEIAR 119
Query: 121 FVELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTM 180
+ + DR SGG Q+R+ +ARAL+ +P++L DEP LD R + I+ +
Sbjct: 120 KLLIDNLLDRKPTQLSGGQQQRVALARALVKQPKVLLFDEPLSNLDANLRMIMRAEIKHL 179
Query: 181 KEEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEEL 222
++E +T TH EA +A RIA+ + GK++ GT +E+
Sbjct: 180 QQELGITSVYVTHDQAEAMTMASRIAVFNQGKLVQYGTPDEV 221
>pir||F72742 probable transport ATP-binding protein APE0471 - Aeropyrum pernix
(strain K1) >gi|5104118|dbj|BAA79434.1| (AP000059) 356aa
long hypothetical transport ATP-binding protein
[Aeropyrum pernix]
Length = 356
Score = 139 bits (348), Expect = 3e-32
Identities = 100/310 (32%), Positives = 163/310 (52%), Gaps = 26/310 (8%)
Query: 4 IEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAIVA 63
IEVE LVK+YG A++G+SF V GE+F +LGPNGAGKTTT+ VL +PTSG A V
Sbjct: 58 IEVEGLVKRYGSVEALRGVSFSVLSGEVFGYLGPNGAGKTTTIRVLMGFSRPTSGSARVF 117
Query: 64 GHDVVKE-PQEVRKKIGIV-----FQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEE 117
G ++ VR+++G V F + Y + G G+ + E
Sbjct: 118 GVELYNPGASGVRRRVGYVPGEFEFYGGVSGGRMLDYWCRLVGGCSRGV--------VRE 169
Query: 118 LLKFVELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYI 177
LL+ L +R V +S GM++ L + A HEP+++ +DEPT GLDP R + +++
Sbjct: 170 LLEAFPL--PLERAVGTYSRGMKQMLALVMAFSHEPDLVVMDEPTTGLDPLARGRVLDFV 227
Query: 178 RTMKEEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIA-EGTSEELKKLVGNDIIYLKLE 236
R+ K +T+F ++H + E +++ADR+ ++ G ++A E S L+K ++ ++
Sbjct: 228 RS-KAREGVTVFFSSHVLSEVQRVADRVGLLRSGVLVALEDVSSLLRK--SGKVVKARV- 283
Query: 237 SPKEELKCLKADFIRGCKLLPDGRVRIDVENATEALPKLFELAQKNNVKILEVTYHRPTL 296
S L D +R + +G + + V + +AL + + ++ LEV TL
Sbjct: 284 SKNLSPDRLAVDGVR--VIRSNGELEL-VVTSGKALESVLRMLLDAGLEDLEV--RDATL 338
Query: 297 NDVFLHLTGR 306
+VF+H R
Sbjct: 339 EEVFMHFYER 348
>pir||G75124 abc-transporter ATP-binding protein PAB0545 - Pyrococcus abyssi
(strain Orsay) >gi|5458223|emb|CAB49712.1| (AJ248285)
ABC-TRANSPORTER ATP-BINDING PROTEIN [Pyrococcus abyssi]
Length = 329
Score = 139 bits (348), Expect = 3e-32
Identities = 79/222 (35%), Positives = 127/222 (56%), Gaps = 3/222 (1%)
Query: 1 MYAIEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKA 60
M +E+ + KK+ F + +VK GE+ + LGP+G GKTTT+ ++ L +P G
Sbjct: 1 MVRVELRGVEKKFPGFKL--RVDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNV 58
Query: 61 IVAGHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLK 120
+ G DV P R IG VFQD +L + ++N+ + L +E++ K+ E+L+
Sbjct: 59 LFDGRDVTFLPPYSRN-IGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLE 117
Query: 121 FVELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTM 180
V L F++R + SGG Q+R+ +ARAL+ EPE+L LDEP LD + R + I+ +
Sbjct: 118 LVGLKGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRI 177
Query: 181 KEEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEEL 222
++E +T TH +EA ++DRIA+++ G+I G EL
Sbjct: 178 QKELGITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLEL 219
>gi|11498288 glutamine ABC transporter, ATP-binding protein (glnQ)
[Archaeoglobus fulgidus] >gi|7442524|pir||H69334
glutamine transport protein glnQ - Archaeoglobus
fulgidus >gi|2649950|gb|AAB90561.1| (AE001058) glutamine
ABC transporter, ATP-binding protein (glnQ)
[Archaeoglobus fulgidus]
Length = 242
Score = 139 bits (346), Expect = 5e-32
Identities = 80/226 (35%), Positives = 133/226 (58%), Gaps = 5/226 (2%)
Query: 1 MYAIEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKA 60
M +E+ +L K++G+ +KG++ KV+KGE+ +GP+G+GK+T + + L +PTSGK
Sbjct: 1 MAQLEIIDLHKRFGELEVLKGVTMKVEKGEVVVIIGPSGSGKSTLLRCINRLEEPTSGKI 60
Query: 61 IVAGHDVVK---EPQEVRKKIGIVFQDPSLDRELTAYENMYIHGM-IYGLKGRELKEKIE 116
++ G D+ + +VR++IGIVFQ +L LTA +N+ + + I + RE +E
Sbjct: 61 LLDGVDITNSKIDINKVRQRIGIVFQQFNLFPHLTALQNVTLAPIKIKKMSKREAEELGM 120
Query: 117 ELLKFVELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEY 176
LL+ V L D SGG Q+R+ IARAL PE++ DE T LDP+ + +
Sbjct: 121 RLLEKVGLEDKADYYPAQLSGGQQQRVAIARALAMNPEVMLFDEVTSALDPELVKEVLDV 180
Query: 177 IRTMKEEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEEL 222
++ + + MT+ + TH M A ++ DR+ +D G I+ EG E++
Sbjct: 181 MKQLARD-GMTMVVVTHEMGFAREVGDRVIFMDGGVIVEEGKPEQI 225
>gb|AAC62423.1| (AF084104) NatA [Bacillus firmus]
Length = 299
Score = 139 bits (346), Expect = 5e-32
Identities = 89/304 (29%), Positives = 156/304 (51%), Gaps = 13/304 (4%)
Query: 4 IEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAIVA 63
+++ N+ K++G AV +S ++ GE+F LG NGAGKTTT ++ LL+PT G+
Sbjct: 3 LKINNITKRFGQSVAVDQLSLEIPSGEMFGMLGANGAGKTTTFRMMLGLLEPTEGEMTWK 62
Query: 64 GHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKFVE 123
G + V IG + ++ L +L + + G + G+ +++ ++ L+ +
Sbjct: 63 GEKIDYSRTNV---IGYLPEERGLYPKLKVRDQLIYLGRLKGMHKKDIIPEMRMWLERFK 119
Query: 124 LWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMKEE 183
+ ++ + ++ S G Q++++ ++IH PE+L LDEP GLDP + E + +K++
Sbjct: 120 VTDYETKRIEELSKGNQQKIQFIASVIHRPELLILDEPFSGLDPVNAELLKEAVIDLKKK 179
Query: 184 HEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVGNDIIYLKLESPKEELK 243
TI ++H MD E+L + I+ HG + +G E+K+ N I ++ E E LK
Sbjct: 180 -GTTIVFSSHRMDHVEELCQHLCILRHGTPVVKGELREIKRSFRNKFIVIEGERSFETLK 238
Query: 244 CLKADFIRGCKLL--PDGRVRIDVENATEALPKLFELAQKNNVKILEVTYHRPTLNDVFL 301
L G K G VR+ VE+ A E+A+ V+ EV P+L D+F+
Sbjct: 239 NLP-----GVKKFQQKQGGVRLQVEDEEVAKVIFAEVAKSGYVRRFEV--EEPSLQDIFI 291
Query: 302 HLTG 305
G
Sbjct: 292 EKVG 295
>pir||T36764 probable ABC-type transport system ATP-binding protein -
Streptomyces coelicolor >gi|5531452|emb|CAB50957.1|
(AL096849) putative ABC-transporter ATP-binding protein
[Streptomyces coelicolor A3(2)]
Length = 306
Score = 139 bits (346), Expect = 5e-32
Identities = 100/306 (32%), Positives = 156/306 (50%), Gaps = 18/306 (5%)
Query: 3 AIEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAIV 62
AI VE L K+YG TAV +SF V G + F GPNGAGKTT + + L +PT+G+A V
Sbjct: 12 AIRVEGLTKRYGRATAVDDLSFTVGTGRVTGFFGPNGAGKTTALKAVVGLARPTAGRAFV 71
Query: 63 AGHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKFV 122
G V + R +G+ + T ++ + GL R ++ E+L+ V
Sbjct: 72 RGTPVAALKPDAR-LLGVHIEPCGAHPGRTGRAHLRSLAALAGLPRR----RVGEVLELV 126
Query: 123 ELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMKE 182
L V +S GM++RL +A AL+ +PEIL LDEP GLDPQ ++RT+
Sbjct: 127 GLEEAARGRVGKYSMGMRQRLGLAAALLGDPEILVLDEPVNGLDPQG----IRWLRTLLR 182
Query: 183 EHEM---TIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVGNDIIYLKLESPK 239
E T+ L++H + EA Q D + +I+ G+++ EG +L++ G ++ ++ +
Sbjct: 183 ERAAKGGTVLLSSHMLGEAAQTVDDVVVINRGRLVHEGAIRDLER-SGERVVAVR-TAEA 240
Query: 240 EELKCLKADFIRGCKLLPDGRVRIDVENATEALPKLFELAQKNNVKILEVTYHRPTLNDV 299
E L L K GR+ ++ + TE + LA ++ V + E+T +L D
Sbjct: 241 ERLSELVTAAGGRTKTDDGGRLLVEGLDVTE----VARLAHRDGVLVEEITERTASLEDA 296
Query: 300 FLHLTG 305
F LTG
Sbjct: 297 FFGLTG 302
>sp|P22040|Y415_SYNY3 HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PROTEIN SLL0415
>gi|7445812|pir||S74323 ABC-type transport protein
sll0415 - Synechocystis sp. (strain PCC 6803)
>gi|1001104|dbj|BAA10241.1| (D64001) ABC transporter
[Synechocystis sp.]
Length = 354
Score = 138 bits (345), Expect = 7e-32
Identities = 90/296 (30%), Positives = 170/296 (57%), Gaps = 20/296 (6%)
Query: 18 AVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAIVAGHDVVKEPQEVRKK 77
++K +S V++GE F LGPNGAGKTT + +L +++ + G+ + G + ++ +++
Sbjct: 69 SLKPLSIAVQQGETFGLLGPNGAGKTTLLKILLGVIRASGGRGTLLGKPI--GDRQTKQR 126
Query: 78 IGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKFVELWR--FKDRPVKYF 135
+G + ++ LTA+E + G ++ + +E + +I + V L + K + ++ +
Sbjct: 127 VGYLPENAYFYDFLTAWEFLDYIGSLFQIGKQERQRRILAMCDLVGLAQKTAKKKQLRQY 186
Query: 136 SGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMKEEHEMTIFLTTHYM 195
S GM +R+ +A+ALI++PE++FLDEP GLDP R + E I ++KE+ + TIF +H +
Sbjct: 187 SKGMLQRVGMAQALINDPEVVFLDEPMSGLDPLGRYQVREIILSLKEQGK-TIFFNSHIL 245
Query: 196 DEAEQLADRIAIIDHGKIIAEGTSEELKKLVGNDIIY-LKLESPKEELKCLKADFIRGCK 254
+ EQ+ DRIAI+ G+++ G+ L +++GND Y + L+ +EE + +
Sbjct: 246 ADVEQICDRIAILARGELLCSGS---LAEVLGNDEGYEVVLKGGEEEALGKYLANLSQEQ 302
Query: 255 LLPDGRVRIDVENATEALPKLFELAQKNNVKILEVTYHRPTLNDVFLHLTGREIRD 310
+ G + DV+ +ALP L N +++ + RP+L D F+ R++R+
Sbjct: 303 DVWHGHYQGDVQALVDALPSL-------NARLISMNLARPSLEDYFI----RQLRE 347
>gi|6005701 ATP-binding cassette, sub-family A member 8 [Homo sapiens]
>gi|4240130|dbj|BAA74845.1| (AB020629) KIAA0822 protein
[Homo sapiens]
Length = 1581
Score = 138 bits (343), Expect = 1e-31
Identities = 90/314 (28%), Positives = 159/314 (49%), Gaps = 18/314 (5%)
Query: 2 YAIEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAI 61
YA + + K + A + +SF V+KGE+ LG NGAGK+T++ V+T KPT+G+ +
Sbjct: 1249 YAGKRKGCFSKRKNKIATRNVSFCVRKGEVLGLLGHNGAGKSTSIKVITGDTKPTAGQVL 1308
Query: 62 VAGHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKF 121
+ G + + +G Q+ +L LT +++ ++ + GL+ + + I L+
Sbjct: 1309 LKGSG----GGDALEFLGYCPQENALWPNLTVRQHLEVYAAVKGLRKGDAEVAITRLVDA 1364
Query: 122 VELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMK 181
++L PVK S G++R+L +++ P ++ LDEP+ G+DP+ + +W+ IR
Sbjct: 1365 LKLQDQLKSPVKTLSEGIKRKLCFVLSILGNPSVVLLDEPSTGMDPEGQQQMWQAIRATF 1424
Query: 182 EEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVGNDIIYLKLESPKEE 241
E LTTHYM EAE + DR+AI+ G++ G+ + LK G D + +
Sbjct: 1425 RNTERGALLTTHYMAEAEAVCDRVAIMVSGRLRCIGSIQHLKSKFGKDYLLEMKVKNLAQ 1484
Query: 242 LKCLKADFIRGCKLLPDGR----------VRIDVENATEALPKLFELAQ-KNNVKILEVT 290
++ L A+ +R L P ++ VE+ F+L + K + + E +
Sbjct: 1485 VEPLHAEILR---LFPQAARQERYSSLMVYKLPVEDVQPLAQAFFKLEKVKQSFDLEEYS 1541
Query: 291 YHRPTLNDVFLHLT 304
+ TL VFL L+
Sbjct: 1542 LSQSTLEQVFLELS 1555
>pir||F72756 probable multiple sugar-binding transport ATP-binding protein
APE0043 - Aeropyrum pernix (strain K1)
>gi|5103431|dbj|BAA78952.1| (AP000058) 381aa long
hypothetical multiple sugar-binding transport
ATP-binding protein [Aeropyrum pernix]
Length = 381
Score = 138 bits (343), Expect = 1e-31
Identities = 71/227 (31%), Positives = 131/227 (57%), Gaps = 7/227 (3%)
Query: 1 MYAIEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKA 60
M I +E +VK++G AV + +K GE F LGP+G GKTTT+ ++ L P G+
Sbjct: 14 MAEIRLEGVVKRFGKVVAVDHVDLSIKDGEFFVLLGPSGCGKTTTLRLIAGLEYPDEGRI 73
Query: 61 IVAGHDVV-KEPQEVRKKIGIVFQDPSLDRELTAYEN----MYIHGMIYGLKGRELKEKI 115
++ G DV K+P++ + + +VFQ+ +L ++ ++N +++ GL +++ ++
Sbjct: 74 LIDGEDVTFKDPKD--RNVAMVFQNYALYPHMSVFDNIAFTLHLRRKEMGLTKDDIRRRV 131
Query: 116 EELLKFVELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWE 175
E+ K + + DR SGG Q+R+ +ARAL+ P++ +DEP LD R +
Sbjct: 132 IEVAKLLRIEDLLDRKPGQLSGGQQQRVALARALVRRPKVWLMDEPLSNLDALLRLAMRA 191
Query: 176 YIRTMKEEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEEL 222
++ ++++ ++T TH EA +ADRIA+++ G+++ GT EE+
Sbjct: 192 ELKKLQKDLKITTVYVTHDQAEAMSMADRIAVMNKGRVVQVGTPEEV 238
>pir||B75082 phosphate abc transporter, ATP-binding protein (pstb) PAB0700 -
Pyrococcus abyssi (strain Orsay)
>gi|5458471|emb|CAB49959.1| (AJ248286) phosphate ABC
transporter, ATP-binding protein (pstB) [Pyrococcus
abyssi]
Length = 280
Score = 137 bits (342), Expect = 2e-31
Identities = 86/235 (36%), Positives = 132/235 (55%), Gaps = 17/235 (7%)
Query: 2 YAIEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLL-----KPT 56
+AIE NL YG +KGI+ K+ K +FA +GP+G GK+T + LL
Sbjct: 31 FAIETRNLRIYYGSNEVIKGINLKIPKNVVFALMGPSGCGKSTLLRAFNRLLDLNPEAKV 90
Query: 57 SGKAIVAGHDVVK---EPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGL-KGRELK 112
G+ ++G ++ +P VR+++G+VFQ P+ LT YEN+ I + GL KG+EL
Sbjct: 91 EGEVRISGVNIYSPDVDPIRVRREVGMVFQYPNPFPHLTIYENVAIGVKLNGLAKGKELD 150
Query: 113 EKIEELLKFVELW-----RFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDP 167
E ++ LK LW R KD P SGG ++RL IAR L +P+I+ +DEPT +DP
Sbjct: 151 EIVKWALKKATLWDEVKNRLKDYPAN-LSGGQKQRLVIARVLAMKPKIILMDEPTANIDP 209
Query: 168 QTRAHIWEYIRTMKEEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEEL 222
I E + +K+++ TI L TH +A +++D +A I GKI+ G + ++
Sbjct: 210 VGTRKIEELLFELKKDY--TIVLVTHSPAQAARVSDYVAFIYMGKIVEVGPTRKV 262
>gi|10954682 probable mikimopine transporter gene~similar to potA gene
[Agrobacterium rhizogenes] >gi|8918682|dbj|BAA97747.1|
(AB039932) hypothetical ABC-transporter gene~similar to
potA gene [Agrobacterium rhizogenes]
>gi|10567346|dbj|BAB16155.1| (AP002086) probable
mikimopine transporter gene~similar to potA gene
[Agrobacterium rhizogenes]
Length = 352
Score = 137 bits (341), Expect = 2e-31
Identities = 71/213 (33%), Positives = 123/213 (57%), Gaps = 1/213 (0%)
Query: 1 MYAIEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKA 60
M I V+N+ K + DF A+ I+ V++GE + LGP+G GK+T + ++ L PT G
Sbjct: 1 MGEISVKNISKSWADFKALNNINLDVREGEFLSILGPSGCGKSTLLRIIAGLESPTDGDI 60
Query: 61 IVAGHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLK 120
++AG V +P ++KIG VFQ+ +L LT ++N+ + + EL++++ + L+
Sbjct: 61 VIAGKQVTNDPVW-KRKIGFVFQNFALWPHLTVFKNVAMGLELRKTPKDELQQRVTKALR 119
Query: 121 FVELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTM 180
V+L DR SGG Q+R+ +ARA++ +P++L LDEP LD R + ++ +
Sbjct: 120 MVQLEALADRLPSQLSGGQQQRVALARAIVLKPDVLLLDEPLSALDKNLRQDMQVELKAL 179
Query: 181 KEEHEMTIFLTTHYMDEAEQLADRIAIIDHGKI 213
+ +T TH +EA L+DR+ +++ G I
Sbjct: 180 QRTLGLTTVFVTHDQEEALSLSDRVVVMNRGVI 212
>pir||C82266 ABC transporter, ATP-binding protein VC0907 [imported] - Vibrio
cholerae (group O1 strain N16961)
>gi|9655363|gb|AAF94069.1| (AE004174) ABC transporter,
ATP-binding protein [Vibrio cholerae]
Length = 344
Score = 136 bits (340), Expect = 3e-31
Identities = 95/298 (31%), Positives = 156/298 (51%), Gaps = 16/298 (5%)
Query: 1 MYAIEVENLVKKYGD--FTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSG 58
M I+ N V GD A+K I+ + +G IF +G +GAGK+T + + L KPTSG
Sbjct: 1 MIEIKSVNKVFYQGDKQIHALKDINLFIPQGTIFGVIGSSGAGKSTLIRCVNMLEKPTSG 60
Query: 59 KAIVAGHDV--VKEPQ--EVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEK 114
+ IV G D+ + PQ R+ IG++FQ +L T +EN+ + + G + ++ K
Sbjct: 61 QVIVDGVDLTTLSNPQLCAARRNIGMIFQHFNLLSSRTVFENVALPLELAGQSQQHIETK 120
Query: 115 IEELLKFVELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIW 174
+ ELL V L ++ SGG ++R+ IARAL +P++L DE T LDP T I
Sbjct: 121 VTELLALVGLSEKRESYPANLSGGQKQRVAIARALASDPKVLLCDEATSALDPATTQSIL 180
Query: 175 EYIRTMKEEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEEL----KKLVGNDI 230
E ++ + + +TI L TH MD + + +AII G+++ +GT ++ K + +
Sbjct: 181 ELLKEINRQLNLTILLITHEMDVVKSICHEVAIIGGGELVEKGTVGDIFAHPKTELAHQF 240
Query: 231 I--YLKLESPKEELKCLKADFIRGCKLLPDGRVRIDVENATEALPKLFELAQKNNVKI 286
I L L P++ L+ + G L VR++ AT P + ++A+K N+ +
Sbjct: 241 IRSTLDLSIPEDYQVRLQPTRVAGSYPL----VRLEFTGATVDAPLMTQIARKYNIDV 294
>pir||E71123 probable sugar transport ATP-binding protein - Pyrococcus
horikoshii >gi|3257164|dbj|BAA29847.1| (AP000003) 357aa
long hypothetical sugar transport ATP-binding protein
[Pyrococcus horikoshii]
Length = 357
Score = 136 bits (339), Expect = 4e-31
Identities = 85/275 (30%), Positives = 145/275 (51%), Gaps = 9/275 (3%)
Query: 1 MYAIEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKA 60
M + ++N+ K +GD AV ++ +VK GE LGP+G GK+TT+ ++ L PT G+
Sbjct: 1 MARVLLKNVTKVFGDVVAVNKLNLEVKDGEFMVLLGPSGCGKSTTLRLIAGLETPTEGE- 59
Query: 61 IVAGHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLK 120
I G +V + ++ + +VFQ+ +L +T + N+ + G+ E +K++E+
Sbjct: 60 IWIGDKLVNDIDPTKRNVAMVFQNYALYPHMTVFGNIEFPLKMAGVPKSERIKKVKEIAD 119
Query: 121 FVELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHI-WEYIRT 179
F+ + +R SGG Q+R+ +ARAL+ EPE+ LDEP LD + R + +E +
Sbjct: 120 FLGIGDLLNRKPSELSGGQQQRVALARALVREPEVFLLDEPLSNLDAKIRTQMRFELKKL 179
Query: 180 MKEEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVGNDIIYLKLESPK 239
+ + ++T TH EA +ADRIA+++ G I GT +E+ N + + SP+
Sbjct: 180 LSYDLKITTIYVTHDQVEAMTMADRIAVMNKGVIQQVGTPDEIFYKPKNTFVATFVGSPQ 239
Query: 240 EELKCLKADFIRGCKLLPDGRVRIDVENATEALPK 274
L I G + DG+V D + LP+
Sbjct: 240 MNL-------IEGEIIKKDGKVIFDCGEFSLRLPE 267
>pir||D75187 probable maltose/maltodextrin transport ATP-binding PAB2336 -
Pyrococcus abyssi (strain Orsay)
>gi|5457456|emb|CAB48947.1| (AJ248283) hypothetical
MALTOSE/MALTODEXTRIN TRANSPORT ATP-BINDING [Pyrococcus
abyssi]
Length = 364
Score = 136 bits (339), Expect = 4e-31
Identities = 71/222 (31%), Positives = 124/222 (54%), Gaps = 1/222 (0%)
Query: 1 MYAIEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKA 60
M + +ENL KK+G+FTAV ++ +K GE LGP+G GKTTT+ ++ L +PT GK
Sbjct: 1 MVEVRLENLTKKFGNFTAVNKLNLTIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTEGKI 60
Query: 61 IVAGHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLK 120
+V P R I +VFQ ++ +T Y+N+ I E+ +++ +
Sbjct: 61 YFGDREVTYLPPRERN-ISMVFQSYAVWPHMTVYDNIAFPLKIKKFPRDEIDKRVRWAAE 119
Query: 121 FVELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTM 180
+++ DR SGG ++R+ +ARA++ EP++L +DEP LD + R + I+ +
Sbjct: 120 LLQIEELLDRYPAQLSGGQRQRVAVARAIVVEPDVLLMDEPLSNLDAKLRVAMRAEIKKL 179
Query: 181 KEEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEEL 222
+++ ++T TH EA + DRIA+++ G+++ G E+
Sbjct: 180 QQKLKVTTIYVTHDQVEAMTMGDRIAVMNRGQLLQVGPPTEV 221
>pir||C71220 probable sugar-binding transport ATP-binding protein - Pyrococcus
horikoshii >gi|3256407|dbj|BAA29090.1| (AP000001) 373aa
long hypothetical sugar-binding transport ATP-binding
protein [Pyrococcus horikoshii]
Length = 373
Score = 135 bits (337), Expect = 6e-31
Identities = 70/222 (31%), Positives = 127/222 (56%), Gaps = 1/222 (0%)
Query: 1 MYAIEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKA 60
M +++ENL K++G+FTAV ++ +K GE LGP+G GKTTT+ ++ L +PT G+
Sbjct: 10 MVEVKLENLTKRFGNFTAVNKLNLTIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTEGRI 69
Query: 61 IVAGHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLK 120
DV P + R I +VFQ ++ +T YEN+ I E+ +++ +
Sbjct: 70 YFGDRDVTYLPPKDRN-ISMVFQSYAVWPHMTVYENIAFPLKIKKFPKDEIDKRVRWAAE 128
Query: 121 FVELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTM 180
+++ +R SGG ++R+ +ARA++ EP++L +DEP LD + R + I+ +
Sbjct: 129 LLQIEELLNRYPAQLSGGQRQRVAVARAIVVEPDVLLMDEPLSNLDAKLRVAMRAEIKKL 188
Query: 181 KEEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEEL 222
+++ ++T TH EA + DRIA+++ G+++ G+ E+
Sbjct: 189 QQKLKVTTIYVTHDQVEAMTMGDRIAVMNRGQLLQIGSPTEV 230
>dbj|BAA75396.1| (AB013378) YhaQ [Bacillus halodurans]
Length = 314
Score = 135 bits (336), Expect = 8e-31
Identities = 96/321 (29%), Positives = 165/321 (50%), Gaps = 23/321 (7%)
Query: 1 MYAIEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKA 60
M ++ N+ K++G FTA+ I+ +V++GEI+ F+GPNGAGK+TT+ +L +LK + G+A
Sbjct: 10 MEIVKATNVTKRFGAFTALNRINLEVQRGEIYGFIGPNGAGKSTTIRILLGILKASEGEA 69
Query: 61 IVAGHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLK 120
+ G DV + E+ K + V D SL LT E + + L+G K++ + ++
Sbjct: 70 KIFGKDVWSDAVEIHKHLAYVPGDVSLWPNLTGGE---VIDLFMKLRGSVDKKRRDHFIE 126
Query: 121 FVELWRFKDRPVK---YFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYI 177
RFK P K +S G ++++ + A ++ LDEPT GLDP E +
Sbjct: 127 -----RFKLDPSKKCRTYSKGNRQKVALVAAFASGADLYILDEPTSGLDPLMERVFQECV 181
Query: 178 RTMKEEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVGNDIIYLKLES 237
KE + ++ L++H + E E+L D++ II G++I GT +EL+ L ++ +K +
Sbjct: 182 LEAKEAGK-SVLLSSHILSEVERLCDKVGIIRQGEMIETGTLDELRHLTRTTLV-VKTKQ 239
Query: 238 PKEELKCLKADFIRGCKLLPDGRVRIDVENATEALPKLFELAQKNNVKILEVTYHRPTLN 297
P L+ K G L + + E+L ++ + + + LE PTL
Sbjct: 240 PIPALQEQK-----GVHDLAEKNGGFSFQVDAESLDEVMKYVSQYGLITLESA--PPTLE 292
Query: 298 DVFLHL---TGREIRDEEGGE 315
D+F+ G+ + GGE
Sbjct: 293 DLFMRHYEGAGQSPTSQAGGE 313
>gb|AAF81232.1| (AF263012) ABC transporter ATP binding protein [Streptomyces
griseus subsp. griseus]
Length = 318
Score = 135 bits (336), Expect = 8e-31
Identities = 100/328 (30%), Positives = 171/328 (51%), Gaps = 33/328 (10%)
Query: 4 IEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAIVA 63
IE ++ KK+GDFTA+ ++ V +G ++ +LGPNGAGK+TT+ +L L +PTSG+ V
Sbjct: 5 IECTDVTKKFGDFTALSRLNLTVPQGVVYGYLGPNGAGKSTTIRMLMGLSRPTSGQVRVL 64
Query: 64 GHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKFVE 123
G D EVR++IG + + LD LT + + G + GL ++++ +
Sbjct: 65 GQD--PTDPEVRRRIGYLPGELRLDERLTIGQTLASWGRLRGLTDTAYRDELVQ------ 116
Query: 124 LWRF---KDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTM 180
RF R V+ S G +R++ + A + +PE+L LDEPT GLDP + ++ T+
Sbjct: 117 --RFGIDPSRRVRGLSTGNRRKVGLVGAFMAKPELLILDEPTNGLDPLMQQ---VFLATV 171
Query: 181 KE--EHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVGNDIIYLKLESP 238
+E ++ ++ L++H + E E++AD +A++ G++ A G ++EL++ E
Sbjct: 172 EEARDNGQSVLLSSHILSEVERVADVVAVLQGGRLAASGPTQELRRRAAQRFHITFAEGE 231
Query: 239 KEELKCLKADFIRGC----KLLPDGR-VRIDVENATEALPKLFELAQKNNVKILEVTYHR 293
L L + G + P+G+ V + + +AL K LA + +I +T
Sbjct: 232 DVPLAALAG--LEGASDVERRSPEGQVVSLAWAGSPDALLKF--LAGR---RITTLTAPE 284
Query: 294 PTLNDVFLHLTGREI---RDEEGGESFA 318
P L + FL R++ RD E E A
Sbjct: 285 PDLEEAFLEYYQRDVPGSRDAEAEEPSA 312
>dbj|BAB04722.1| (AP001510) ABC transporter (ATP-binding protein) [Bacillus
halodurans]
Length = 305
Score = 135 bits (336), Expect = 8e-31
Identities = 96/321 (29%), Positives = 165/321 (50%), Gaps = 23/321 (7%)
Query: 1 MYAIEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKA 60
M ++ N+ K++G FTA+ I+ +V++GEI+ F+GPNGAGK+TT+ +L +LK + G+A
Sbjct: 1 MEIVKATNVTKRFGAFTALNRINLEVQRGEIYGFIGPNGAGKSTTIRILLGILKASEGEA 60
Query: 61 IVAGHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLK 120
+ G DV + E+ K + V D SL LT E + + L+G K++ + ++
Sbjct: 61 KIFGKDVWSDAVEIHKHLAYVPGDVSLWPNLTGGE---VIDLFMKLRGSVDKKRRDHFIE 117
Query: 121 FVELWRFKDRPVK---YFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYI 177
RFK P K +S G ++++ + A ++ LDEPT GLDP E +
Sbjct: 118 -----RFKLDPSKKCRTYSKGNRQKVALVAAFASGADLYILDEPTSGLDPLMERVFQECV 172
Query: 178 RTMKEEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVGNDIIYLKLES 237
KE + ++ L++H + E E+L D++ II G++I GT +EL+ L ++ +K +
Sbjct: 173 LEAKEAGK-SVLLSSHILSEVERLCDKVGIIRQGEMIETGTLDELRHLTRTTLV-VKTKQ 230
Query: 238 PKEELKCLKADFIRGCKLLPDGRVRIDVENATEALPKLFELAQKNNVKILEVTYHRPTLN 297
P L+ K G L + + E+L ++ + + + LE PTL
Sbjct: 231 PIPALQEQK-----GVHDLAEKNGGFSFQVDAESLDEVMKYVSQYGLITLESA--PPTLE 283
Query: 298 DVFLHL---TGREIRDEEGGE 315
D+F+ G+ + GGE
Sbjct: 284 DLFMRHYEGAGQSPTSQAGGE 304
>gb|AAG19162.1| (AE005013) Vng0668c [Halobacterium sp. NRC-1]
Length = 298
Score = 135 bits (336), Expect = 8e-31
Identities = 102/317 (32%), Positives = 156/317 (49%), Gaps = 37/317 (11%)
Query: 7 ENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAIVAGHD 66
+++ K YGD A++G+S V +GE+FA +GPNGAGKTT V LT P G+ + G
Sbjct: 8 DDVAKSYGDAAALRGVSLSVSEGEVFALVGPNGAGKTTLVRCLTGTTTPDGGRVELLG-- 65
Query: 67 VVKEPQEVRK-KIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEEL-LKFVEL 124
+ PQ+ +K ++G++ Q S LTA E + + +Y R +E + L +
Sbjct: 66 --EPPQDAQKQRLGLLPQSFSPPDRLTAAELVGYYAGLYA-DSRAPDAVLESVGLDPDDA 122
Query: 125 WRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMKEEH 184
R+ D SGG +RR +A AL+++P++LFLDEPT G+DP R +W + +
Sbjct: 123 TRYGD-----LSGGQRRRACVAAALVNDPDVLFLDEPTTGVDPAGRHALWSVFEGLAAD- 176
Query: 185 EMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKL-VGNDIIYLKLESPKE--E 241
TI LTTH M EA LADR+ ++ G I A GT +L G+ + + ++ E
Sbjct: 177 GTTIVLTTHDMAEASALADRVGLLADGDIAATGTPADLVAAHAGSPRLVVDTDADPELAG 236
Query: 242 LKCLKAD---FIRGCKLLPDGRVRIDVENATEALPKLFELAQKNNVKILEVTYHRPTLND 298
C + D G G + +++A A L ++ P+L D
Sbjct: 237 FDCTRTDAGLVFEGVDPTAVGEIAAALDDADVAFDAL--------------SWREPSLED 282
Query: 299 VFLHLTGREIRDEEGGE 315
+L L G D E GE
Sbjct: 283 AYLALAG----DAERGE 295
>sp|P45073|YHBG_HAEIN PROBABLE ABC TRANSPORTER ATP-BINDING PROTEIN HI1148
>gi|1074660|pir||I64167 hypothetical protein HI1148 -
Haemophilus influenzae (strain Rd KW20)
>gi|1574704|gb|AAC22803.1| (U32794) ABC transporter,
ATP-binding protein [Haemophilus influenzae Rd]
Length = 241
Score = 134 bits (334), Expect = 1e-30
Identities = 80/225 (35%), Positives = 124/225 (54%), Gaps = 4/225 (1%)
Query: 1 MYAIEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKA 60
M + ENL K Y V +S V EI LGPNGAGKTTT +++ L++ GK
Sbjct: 1 MSILTAENLAKSYKSRKVVSDVSLTVNSNEIVGLLGPNGAGKTTTFYMVVGLVRQDQGKI 60
Query: 61 IVAGHDVVKEPQEVRKKIGIVF--QDPSLDRELTAYEN-MYIHGMIYGLKGRELKEKIEE 117
++ G D+ P R + GI + Q+ S+ R LT YEN M + + L ++ +EK +E
Sbjct: 61 VIDGEDISLLPMHNRAQRGIGYLPQEASIFRRLTVYENLMAVLEIRKDLTPQQRREKADE 120
Query: 118 LLKFVELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYI 177
L++ + +D + SGG +RR+EIARAL P+ + LDEP G+DP + + I + I
Sbjct: 121 LIEEFNISHIRDNLGQALSGGERRRVEIARALAANPKFILLDEPFAGVDPISVSDIKKII 180
Query: 178 RTMKEEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEEL 222
++ + + +T H + E + +R I+ GKIIA GT E++
Sbjct: 181 TDLR-NRGLGVLITDHNVRETLDVCERAYIVGAGKIIATGTPEQV 224
>emb|CAB76078.1| (AL157953) putative ABC transporter ATP-binding protein
[Streptomyces coelicolor A3(2)]
Length = 368
Score = 134 bits (334), Expect = 1e-30
Identities = 94/301 (31%), Positives = 148/301 (48%), Gaps = 30/301 (9%)
Query: 2 YAIEVENLVKKYG----DFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTS 57
+ I L K Y + TA+ G+ V++GE++ +G +GAGK++ + + L +PT+
Sbjct: 17 HVITTSGLTKVYRSRGREVTALDGVDLHVREGEVYGVIGQSGAGKSSLIRCVNLLERPTA 76
Query: 58 GKAIVAGHDVV----------KEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLK 107
G VAG D+ +E ++ R +IG+VFQ +L T +N+ + I G
Sbjct: 77 GTVTVAGADLTALAGRGPRAGRELRQARSRIGMVFQHFNLLSSRTVQDNVELPLEILGKS 136
Query: 108 GRELKEKIEELLKFVELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDP 167
G+E K ELL V L SGG ++R+ IARAL +P++L DE T LDP
Sbjct: 137 GKERSRKALELLDLVGLADKARAYPAQLSGGQKQRVGIARALAGDPKVLLSDEATSALDP 196
Query: 168 QTRAHIWEYIRTMKEEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVG 227
+T I + +R + + +T+ L TH MD + + D A++D G+++ GT EL
Sbjct: 197 ETTRSILQLLRDLNRQLGLTVLLITHEMDVVKSICDSAALMDRGRVVESGTVGEL----- 251
Query: 228 NDIIYLKLESPKEELKCLKADFIRGCKLLPDGRVRIDVENATEAL--PKLFELAQKNNVK 285
L +P EL A F G D R +DV EA P + +L++ N+
Sbjct: 252 -------LATPGSELAA--ALFPVGGDASGDDRTVLDVTFHGEAATQPVISQLSRTYNID 302
Query: 286 I 286
I
Sbjct: 303 I 303
>emb|CAC08286.1| (AL392148) putative ABC transporter ATP-binding protein
[Streptomyces coelicolor]
Length = 327
Score = 133 bits (332), Expect = 2e-30
Identities = 96/310 (30%), Positives = 152/310 (48%), Gaps = 19/310 (6%)
Query: 4 IEVENLVKKY-GDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAIV 62
I L K+Y G AV G+ V G +F FLGPNG+GKTTT+ +L L++PTSG A V
Sbjct: 22 IATRALTKRYRGGQLAVDGLDLTVPAGSVFGFLGPNGSGKTTTIRMLMGLIEPTSGSARV 81
Query: 63 AGHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKG-RELKEKIEELLKF 121
G + + + V ++G + + P+L L+ +N+ + R +E++ L
Sbjct: 82 LGRPMPRAARAVLPRVGALIEGPALYGFLSGRDNLLRYDAADPTADPRTRRERVAAALDR 141
Query: 122 VELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMK 181
V L + K +S GM++RL +A AL+ +L LDEPT GLDPQ I +R +
Sbjct: 142 VGLAAAGGKKAKAYSLGMKQRLGLAAALLQPRRLLVLDEPTNGLDPQGMREIRSLVRELA 201
Query: 182 EEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVGNDIIYLKLESPKEE 241
+ T+FL++H +DE EQ+ A++ G++I +G +L ++ ++
Sbjct: 202 SD-GTTVFLSSHLLDEIEQVCTHAAVMAQGRLITQGAVADLAAGARGRLVVTTPDA---- 256
Query: 242 LKCLKADFIRGCKLLPDGRVRIDVENATEALPKLFELAQKN------NVKILEVTYHRPT 295
D R K V +D + T A P +LA+ N V++ R +
Sbjct: 257 -----GDAARVLKEQGAADVVVDGDRVT-AEPPERDLAEVNAALVAARVRVRGFVVERAS 310
Query: 296 LNDVFLHLTG 305
L D F+ LTG
Sbjct: 311 LEDAFVALTG 320
>emb|CAC11378.1| (AL445063) gliding motility protein related [Thermoplasma
acidophilum]
Length = 239
Score = 132 bits (330), Expect = 4e-30
Identities = 82/225 (36%), Positives = 128/225 (56%), Gaps = 8/225 (3%)
Query: 1 MYAIEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKA 60
M IE ++ K +G A+ G+SF V+ E A +GPNGAGK+TT+ +L L+KP SG
Sbjct: 4 MNCIEFNDVTKSFGTKKALDGLSFDVECQESVALIGPNGAGKSTTLKILAGLIKPDSGSV 63
Query: 61 IVAGHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLK 120
V G D + E ++ +G + +D S L+ EN+ G + K +L++K+E LL
Sbjct: 64 KVGGFD--PDSIEAKRLMGYLPEDASPYLTLSVKENLEYIGAL--RKTEDLEQKVEFLLN 119
Query: 121 FVELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTM 180
+EL +++ V S G +++L IA A+IH+P+I+ LDEP LD T+ I +Y +M
Sbjct: 120 LMELNEYRNSRVSTLSRGNRQKLSIALAIIHDPKIMLLDEPLNYLDIPTQEKIIKYFNSM 179
Query: 181 KEEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKL 225
T ++TH M AE+ R II+ G+ I G +ELK++
Sbjct: 180 ----NATFLVSTHIMSIAERFTRRAIIINSGRQIWTGQIDELKEM 220
>gb|AAB17558.1| (U72493) ATP binding protein [Chlamydia trachomatis]
Length = 257
Score = 131 bits (326), Expect = 1e-29
Identities = 78/224 (34%), Positives = 118/224 (51%), Gaps = 3/224 (1%)
Query: 1 MYAIEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKA 60
M + V NL+KKY +SF+V GEI LGPNGAGKTT + L++P SGK
Sbjct: 1 MSVLSVCNLIKKYNKKPVTNDVSFQVNAGEIVGLLGPNGAGKTTAFYQTVGLIRPDSGKI 60
Query: 61 IVAGHDVVKEPQEVRKKIGIVF--QDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEEL 118
+ D+ K+P + R ++GI + Q+P++ +ELT EN+ I +E + L
Sbjct: 61 LFKNTDITKKPMDYRARLGIGYLAQEPTIFKELTVKENLICVLEIIYKTRKEQTHLLNAL 120
Query: 119 LKFVELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIR 178
+ ++L + SGG +RRLEIA L P +L LDEP +DP ++ +Y+
Sbjct: 121 IDDLQLTTSLHKKAGSLSGGERRRLEIACVLALNPSVLLLDEPFANVDPLVIQNV-KYLI 179
Query: 179 TMKEEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEEL 222
+ + I +T H E +ADR +I GKI EG+S ++
Sbjct: 180 KILASRGIGILITDHNAKELLSIADRCYLIIDGKIFFEGSSAQM 223
>pir||G71486 probable ABC transporter ATPase - Chlamydia trachomatis (serotype
D, strain UW3/Cx) >gi|3329103|gb|AAC68248.1| (AE001336)
ABC Transporter ATPase [Chlamydia trachomatis]
Length = 239
Score = 131 bits (326), Expect = 1e-29
Identities = 78/224 (34%), Positives = 118/224 (51%), Gaps = 3/224 (1%)
Query: 1 MYAIEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKA 60
M + V NL+KKY +SF+V GEI LGPNGAGKTT + L++P SGK
Sbjct: 1 MSVLSVCNLIKKYNKKPVTNDVSFQVNAGEIVGLLGPNGAGKTTAFYQTVGLIRPDSGKI 60
Query: 61 IVAGHDVVKEPQEVRKKIGIVF--QDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEEL 118
+ D+ K+P + R ++GI + Q+P++ +ELT EN+ I +E + L
Sbjct: 61 LFKNTDITKKPMDYRARLGIGYLAQEPTIFKELTVKENLICVLEIIYKTRKEQTHLLNAL 120
Query: 119 LKFVELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIR 178
+ ++L + SGG +RRLEIA L P +L LDEP +DP ++ +Y+
Sbjct: 121 IDDLQLTTSLHKKAGSLSGGERRRLEIACVLALNPSVLLLDEPFANVDPLVIQNV-KYLI 179
Query: 179 TMKEEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEEL 222
+ + I +T H E +ADR +I GKI EG+S ++
Sbjct: 180 KILASRGIGILITDHNAKELLSIADRCYLIIDGKIFFEGSSAQM 223
>gb|AAG20488.1| (AE005121) sulfate transport system ATP-binding protein; CysA
[Halobacterium sp. NRC-1]
Length = 343
Score = 131 bits (326), Expect = 1e-29
Identities = 80/227 (35%), Positives = 122/227 (53%), Gaps = 13/227 (5%)
Query: 1 MYAIEVENLVKKYGDFT-AVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGK 59
M ++E++ LV+ +G T AV +S + GE F +GP+G GKTTT+ ++ P G+
Sbjct: 1 MTSVELQGLVRAFGSTTTAVDDVSVSIADGEFFTLVGPSGCGKTTTLRLIAGFETPDRGE 60
Query: 60 AIVAGHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRE------LKE 113
+ V P E R +GIVFQ +L +T EN+ YGL+ RE +E
Sbjct: 61 IVFGDRSVSGVPPEDRD-VGIVFQSYALFPHMTVRENV-----AYGLRFREPPGGASTEE 114
Query: 114 KIEELLKFVELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHI 173
++ ELL V+L DR SGG Q+R+ +ARAL P +L LDEP LD + R +
Sbjct: 115 RVSELLSLVDLAGTGDREPAALSGGQQQRVALARALAPGPSVLLLDEPMSALDARLRDRL 174
Query: 174 WEYIRTMKEEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSE 220
I+ ++ E ++T TH EA ++DR+A++ G ++ GT E
Sbjct: 175 RGTIKEIQRELDITTVYVTHDQAEALSISDRVAVMRDGAVVQVGTPE 221
>dbj|BAB07815.1| (AB036417) CysA protein [Acetabularia acetabulum]
Length = 357
Score = 131 bits (325), Expect = 2e-29
Identities = 76/225 (33%), Positives = 127/225 (55%), Gaps = 6/225 (2%)
Query: 2 YAIEVENLVKKY----GDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTS 57
+ ++++ +VK Y G F AV G+ ++ GEI A LGP+G+GKTT + V+ L + T
Sbjct: 6 FDVKLQGIVKHYKTRKGIFKAVNGVDLEINSGEIVALLGPSGSGKTTLLRVMAGLEEITE 65
Query: 58 GKAIVAGHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEE 117
GK G D E R+ IG VFQ +L + LT +N+ G +++++++E
Sbjct: 66 GKIFYDGEDATDWSLEDRQ-IGFVFQGYALFKHLTVGDNIAF-GPRMKKMDIDIRKRVKE 123
Query: 118 LLKFVELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYI 177
LL V+L + R + SGG ++R+ +ARAL +EP +L LDEP LDP+ R + +
Sbjct: 124 LLDLVQLPGLESRFPQQLSGGQRQRIALARALAYEPRLLLLDEPFGALDPEIREDLRNSL 183
Query: 178 RTMKEEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEEL 222
+ + +T + TH +EA ++ADR+ + + G I G+ E++
Sbjct: 184 KRIISSLNLTSVMVTHDQEEAFEVADRVVVFNKGSIEQVGSLEDI 228
>pir||B64458 high-affinity branched-chain amino acid transport ATP-binding
protein homolog - Methanococcus jannaschii
>gi|1591902|gb|AAB99273.1| (U67567) high-affinity
branched-chain amino acid transport ATP-binding protein
(braF) [Methanococcus jannaschii]
Length = 257
Score = 130 bits (324), Expect = 2e-29
Identities = 82/245 (33%), Positives = 132/245 (53%), Gaps = 18/245 (7%)
Query: 1 MYAIEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKA 60
M + EN+VK +G+F A+ G+S V KG++ +GPNG+GK+T ++V+T LK G+
Sbjct: 5 MEILRTENIVKYFGEFKALDGVSISVNKGDVTLIIGPNGSGKSTLINVITGFLKADEGRV 64
Query: 61 IVAGHDVV-KEPQEVRKKIGIV--FQDPSLDRELTAYENMYI----------HGMIYGL- 106
D+ KEP E+ GIV FQ P +E+T EN+ I + + Y
Sbjct: 65 YFENKDITNKEPAEL-YHYGIVRTFQTPQPLKEMTVLENLLIGEINPGESPLNSLFYKKW 123
Query: 107 --KGRELKEKIEELLKFVELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIG 164
K E+ EK ++L+F++L DR SGG + +EI RAL+ P+++ +DEP G
Sbjct: 124 IPKEEEMVEKAFKILEFLKLSHLYDRKAGELSGGQMKLVEIGRALMTNPKMIVMDEPIAG 183
Query: 165 LDPQTRAHIWEYIRTMKEEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKK 224
+ P I+ ++ +K + +T + H +D D + ++ +G+IIAEG EE K
Sbjct: 184 VAPGLAHDIFNHVLELKAK-GITFLIIEHRLDIVLNYIDHLYVMFNGQIIAEGRGEEEIK 242
Query: 225 LVGND 229
V +D
Sbjct: 243 NVLSD 247
>pir||F71654 ABC transporter ATP-binding protein (abcT2) RP508 - Rickettsia
prowazekii >gi|3861060|emb|CAA14960.1| (AJ235272) ABC
TRANSPORTER ATP-BINDING PROTEIN (abcT2) [Rickettsia
prowazekii]
Length = 254
Score = 130 bits (324), Expect = 2e-29
Identities = 73/224 (32%), Positives = 126/224 (55%), Gaps = 3/224 (1%)
Query: 1 MYAIEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKA 60
M +++++N+ K Y + IS +K+GEI GPNGAGKTT +++ L++P SG+
Sbjct: 15 MDSLQIKNISKSYKKRNILTDISLHIKQGEIVGLFGPNGAGKTTCFNIIIGLMRPDSGQL 74
Query: 61 IVAGHDVVKEPQEVRKKIGI--VFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEEL 118
++ ++ P +R ++GI + Q+PS+ R L+ +N+ I +++K L
Sbjct: 75 LLNDINITNLPIYLRARLGIGYLLQEPSIFRGLSVADNIKAVVEISENDKEVIEQKTHNL 134
Query: 119 LKFVELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIR 178
L+ + KD SGG +RRLEIAR+ + EP+ + LDEP G+DP + I + I
Sbjct: 135 LEKFSIVHLKDLSSASLSGGERRRLEIARSFVIEPKFIMLDEPLAGIDPLAISDIKKLI- 193
Query: 179 TMKEEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEEL 222
T E + I +T H + + + DR +I GK++ EG+++E+
Sbjct: 194 TYLREFNIGILITDHNVRDTLDIVDRAYVIFEGKVLLEGSAQEI 237
>pir||T36064 ABC-type transport system ATP-binding protein - Streptomyces
coelicolor >gi|3928734|emb|CAA22230.1| (AL034355) ABC
transporter ATP-binding protein [Streptomyces coelicolor
A3(2)]
Length = 303
Score = 130 bits (324), Expect = 2e-29
Identities = 95/310 (30%), Positives = 169/310 (53%), Gaps = 17/310 (5%)
Query: 1 MYAIEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKA 60
M + ++++ + +G+ AV I+ + G + LGPNGAGK+T ++++ L P++G
Sbjct: 1 MTTLNIDHVSRWFGNVVAVNDITMTIGPG-VTGLLGPNGAGKSTLINMMGGFLAPSTGSV 59
Query: 61 IVAGHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLK 120
+ G V + +++ K IGIV + ++ LT E + + ++GL R +E L
Sbjct: 60 TLDGQPVWRN-EDIYKHIGIVPEREAMYDFLTGREFVLANAELHGLGARAA----DEALA 114
Query: 121 FVELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTM 180
VE+ +DR + +S GM++R+++A AL+H+P +L LDEP G+DP+ R + + +R M
Sbjct: 115 TVEMAYAQDRKIATYSKGMRQRVKMASALVHQPSLLLLDEPFNGMDPRQRMQLMDLLRRM 174
Query: 181 KEEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLV-GNDIIYLKLESPK 239
+E T+ ++H ++E EQLA I +I G+ A G ++++L+ YL S
Sbjct: 175 GDEGR-TVLFSSHILEEVEQLAWHIEVIVAGRHAASGDFRKIRRLMTDRPHRYLVRSSDD 233
Query: 240 EEL-KCLKAD-FIRGCKL-LPDGRVRI---DVENATEALPKLFELAQKNNVKILEVTYHR 293
L L AD G ++ L +G +RI D T LPK +A+ + +++L V+
Sbjct: 234 RALAAALIADPSTSGIEVDLAEGALRIQAVDFGRFTVLLPK---VARDHGIRLLTVSPSD 290
Query: 294 PTLNDVFLHL 303
+L VF +L
Sbjct: 291 ESLESVFSYL 300
>pir||B75207 multiple sugar-binding transport ATP-binding protein msmk PAB0123 -
Pyrococcus abyssi (strain Orsay)
>gi|5457614|emb|CAB49105.1| (AJ248283) MULTIPLE
SUGAR-BINDING TRANSPORT ATP-BINDING PROTEIN MSMK
[Pyrococcus abyssi]
Length = 371
Score = 130 bits (324), Expect = 2e-29
Identities = 84/297 (28%), Positives = 154/297 (51%), Gaps = 16/297 (5%)
Query: 1 MYAIEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKA 60
M +++ N+ KK+GDFTAVK +S ++K GE LGP+G GKTTT+ ++ L +PT G+
Sbjct: 1 MAEVKLINVWKKFGDFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQ- 59
Query: 61 IVAGHDVVKEPQE------VRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEK 114
I +V +P++ + + +VFQ +L +T Y+N+ + + +E+ +
Sbjct: 60 IYIDDKLVADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEIDRR 119
Query: 115 IEELLKFVELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIW 174
+ E+ + + L R + SGG ++R+ + RA+I P++ +DEP LD + R +
Sbjct: 120 VREVAEMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMR 179
Query: 175 EYIRTMKEEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVGNDIIYLK 234
++ ++ + +T TH EA + DRIA+++ G++ GT +E+ N +
Sbjct: 180 AELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLNTFVAGF 239
Query: 235 LESPKEELKCLKADFIRGCKLLPDGRVRIDVENATEALPKLFELAQKNNVKILEVTY 291
+ SP + L A + L G R+ + L FE+ ++NN+ EV +
Sbjct: 240 IGSP--PMNFLTAT-VSSDGFLDFGEFRL------KLLKDQFEVLEENNLIGKEVIF 287
>gb|AAB95372.1| (U75349) putative ABC transporter BitD [Brachyspira hyodysenteriae]
Length = 374
Score = 130 bits (323), Expect = 3e-29
Identities = 97/331 (29%), Positives = 166/331 (49%), Gaps = 39/331 (11%)
Query: 3 AIEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAIV 62
+I +EN+VK+Y T + +S ++K GE F LGP+G GKTT + ++ G I
Sbjct: 4 SISIENVVKRYEKLTIIPDLSLEIKNGEFFTLLGPSGCGKTTLLRMIAGF-NTIEGGEIK 62
Query: 63 AGHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRE-----LKEKIEE 117
DV+ ++ IG+VFQ+ ++ +T EN+ YGLK R+ +K+K++E
Sbjct: 63 FDKDVINNIPAHKRNIGMVFQNYAIFPHMTVRENVE-----YGLKLRKENKESMKKKVDE 117
Query: 118 LLKFVELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYI 177
+L V++ ++DR + SGG Q+R+ +ARA++ P +L +DEP LD + R + I
Sbjct: 118 MLHVVKIEEYQDRLPERLSGGQQQRVALARAIVITPSVLLMDEPLSNLDAKLRIEMRSAI 177
Query: 178 RTMKEEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEEL---------KKLVGN 228
+ ++ +T TH +EA ++DRIA++ +G I G+ + +G+
Sbjct: 178 KDIQRHVGITTVYVTHDQEEALAVSDRIAVMKNGVIQQVGSPVSIYTRPYNVFVATFIGH 237
Query: 229 DIIY---LKLESPKEELKCLKADFIRGCKLLPDGRVRIDVENATEAL----PKLFELAQK 281
++ +K+E L F G KL D +DV++ E + P+ F + +
Sbjct: 238 SNLFYATIKIEGNDTYLL-----FRCGYKLKMDN--LLDVKDGDEVVVGIRPEEFFVNSE 290
Query: 282 NN----VKILEVTYHRPTLNDVFLHLTGREI 308
N+ KIL T+ N FLH E+
Sbjct: 291 NDEGIKAKILSKTFLGKYTN-YFLHFNDNEV 320
>sp|O52618|NODI_RHIME NODULATION ATP-BINDING PROTEIN I >gi|2809541|gb|AAB97762.1|
(AF043118) nodulation ATP-binding protein [Sinorhizobium
meliloti]
Length = 213
Score = 130 bits (323), Expect = 3e-29
Identities = 85/226 (37%), Positives = 123/226 (53%), Gaps = 18/226 (7%)
Query: 90 ELTAYENMYIHGMIYGLKGRELKEKIEELLKFVELWRFKDRPVKYFSGGMQRRLEIARAL 149
E T EN+ + G + + RE++ I LL+F L D V SGGM+RRL +ARAL
Sbjct: 1 EFTVRENLLVFGRYFRMSTREIEAVIPSLLEFARLENKADARVSDLSGGMKRRLTLARAL 60
Query: 150 IHEPEILFLDEPTIGLDPQTRAHIWEYIRTMKEEHEMTIFLTTHYMDEAEQLADRIAIID 209
I++P++L LDEPT GLDP R IWE +R++ + TI LTTH M+EAE+L DR+ +++
Sbjct: 61 INDPQLLILDEPTTGLDPHARHLIWERLRSLLARGK-TILLTTHIMEEAERLCDRLCVLE 119
Query: 210 HGKIIAEGTSEEL-KKLVGNDIIYLKLESPKEELKCLKADFIRGCKLLPDGRVRIDVEN- 267
G IAEG L + +G +I + P EL L + R + + E
Sbjct: 120 AGHKIAEGRPHMLIDEKIGCQVIEIYGGDP-HELSALVSPHAR--------HIEVSGETV 170
Query: 268 ---ATEALPKLFELAQKNNVKILEVTYHRPTLNDVFLHLTGREIRD 310
A++ +L + V+ L+ P L DVFL LTGRE++D
Sbjct: 171 FCYASDPEQVRVQLDGRAGVRFLQ---RPPNLEDVFLRLTGRELKD 213
>gb|AAF33771.1|AF219259_4 (AF219259) YhbG [Haemophilus ducreyi]
Length = 241
Score = 130 bits (323), Expect = 3e-29
Identities = 78/225 (34%), Positives = 123/225 (54%), Gaps = 4/225 (1%)
Query: 1 MYAIEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKA 60
M + E+L K Y + VK +S VK GEI LGPNGAGKTTT +++ L++ GK
Sbjct: 1 MPTLYAEHLAKSYKNRQVVKDVSLNVKAGEIIGLLGPNGAGKTTTFYMVVGLVRHDQGKI 60
Query: 61 IVAGHDVVKEPQEVRKKIGIVF--QDPSLDRELTAYEN-MYIHGMIYGLKGRELKEKIEE 117
+ D+ P R K GI + Q+ S+ L+ Y+N M + + L ++ K++ EE
Sbjct: 61 RIDDQDISVLPMHDRAKYGIGYLPQEASIFHRLSVYDNLMAVLQVRKDLNNQQRKDRAEE 120
Query: 118 LLKFVELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYI 177
L+ + +D + SGG +RR+EIARAL P+ + LDEP G+DP + I + I
Sbjct: 121 LISEFHIEHIRDNLGQALSGGERRRVEIARALAANPQFILLDEPFAGVDPISVIDIKKII 180
Query: 178 RTMKEEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEEL 222
+K + + + +T H + E + R I+ G++IA GT E++
Sbjct: 181 VHLK-QRGLGVLITDHNVRETLNVCQRAYIVGSGQMIANGTPEQI 224
>gb|AAF73520.1| (AE002271) ABC transporter, ATP-binding protein [Chlamydia
muridarum]
Length = 239
Score = 130 bits (323), Expect = 3e-29
Identities = 77/224 (34%), Positives = 118/224 (52%), Gaps = 3/224 (1%)
Query: 1 MYAIEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKA 60
M + V NL+K+Y +SF+V GEI LGPNGAGKTT + L++P SGK
Sbjct: 1 MSVLSVCNLIKRYNKKPVTNDVSFQVNAGEIVGLLGPNGAGKTTAFYQTVGLIRPDSGKI 60
Query: 61 IVAGHDVVKEPQEVRKKIGIVF--QDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEEL 118
+ D+ K+P + R ++GI + Q+P++ +ELT EN+ I +E + L
Sbjct: 61 LFKNTDITKKPMDYRARLGIGYLAQEPTIFKELTVKENLICVLEIIYKTRKEQTHLLNAL 120
Query: 119 LKFVELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIR 178
+ ++L + SGG +RRLEIA L P +L LDEP +DP ++ +Y+
Sbjct: 121 IDDLQLTTSLHKKAGSLSGGERRRLEIACVLALNPSVLLLDEPFANVDPLVIQNV-KYLI 179
Query: 179 TMKEEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEEL 222
+ + I +T H E +ADR +I GKI EG+S ++
Sbjct: 180 KILASRGIGILITDHNAKELLSIADRCYLIIDGKIFFEGSSAQM 223
>sp|P37774|YECC_ECOLI HYPOTHETICAL AMINO-ACID ABC TRANSPORTER ATP-BINDING PROTEIN YECC
>gi|7442520|pir||B64955 ABC-type transport protein yecC
- Escherichia coli >gi|1736576|dbj|BAA15737.1| (D90832)
ORF_ID:o341#14; similar to [SwissProt Accession Number
P37774] [Escherichia coli] >gi|1788225|gb|AAC74984.1|
(AE000284) putative ATP-binding component of a transport
system [Escherichia coli K12]
Length = 250
Score = 129 bits (322), Expect = 3e-29
Identities = 83/235 (35%), Positives = 128/235 (54%), Gaps = 17/235 (7%)
Query: 1 MYAIEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKA 60
M AIEV+NLVKK+ T + GI +VK GE+ A +GP+G+GKTT + + L +P +G
Sbjct: 1 MSAIEVKNLVKKFHGQTVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRSINLLEQPEAGTI 60
Query: 61 IVAGHDVVKEP-----------QEVRKKIGIVFQDPSLDRELTAYENMYIHG--MIYGLK 107
V D+ + +++R+ +G VFQ+ +L T EN+ I G ++ G
Sbjct: 61 TVG--DITIDTARSLSQQKSLIRQLRQHVGFVFQNFNLFPHRTVLENI-IEGPVIVKGEP 117
Query: 108 GRELKEKIEELLKFVELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDP 167
E + ELL V L + + SGG Q+R+ IARAL PE++ DEPT LDP
Sbjct: 118 KEEATARARELLAKVGLAGKETSYPRRLSGGQQQRVAIARALAMRPEVILFDEPTSALDP 177
Query: 168 QTRAHIWEYIRTMKEEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEEL 222
+ + IR + +E + T+ + TH M A +ADR +D G+I+ +G ++ L
Sbjct: 178 ELVGEVLNTIRQLAQE-KRTMVIVTHEMSFARDVADRAIFMDQGRIVEQGAAKAL 231
>pir||A72279 sugar ABC transporter, ATP-binding protein - Thermotoga maritima
(strain MSB8) >gi|4981786|gb|AAD36307.1|AE001779_9
(AE001779) sugar ABC transporter, ATP-binding protein
[Thermotoga maritima]
Length = 355
Score = 129 bits (322), Expect = 3e-29
Identities = 92/317 (29%), Positives = 156/317 (49%), Gaps = 20/317 (6%)
Query: 1 MYAIEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKA 60
M ++++ + K +G+ A+ GI V +GE LGP+G GKTT + + L + T GK
Sbjct: 1 MAQVKIDGVKKYFGNVRALDGIDLVVNEGEFLVLLGPSGCGKTTLLRCIAGLEQVTGGKI 60
Query: 61 IVAGHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGREL-KEKIEELL 119
DV P + R I +VFQ ++ + Y+N+ Y LK +++ KE+IE+ +
Sbjct: 61 FFNDRDVTNLPPKDRN-ISMVFQSYAVWPHMKVYDNI-----AYPLKLKKVPKEEIEKRV 114
Query: 120 KF----VELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWE 175
K+ + + DR SGG ++R+ +ARA++HEPE+L +DEP LD R +
Sbjct: 115 KWAADLLHISELLDRYPAQLSGGQRQRVAVARAIVHEPEVLLMDEPLSNLDALLRVKMRS 174
Query: 176 YIRTMKEEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVGNDIIYLKL 235
++ ++E +T TH EA + DRIA+++ GK+ GT E+ N + +
Sbjct: 175 ELKKLQERIGVTTIYVTHDQTEAMTMGDRIAVMNQGKLQQVGTPSEIYHHPVNIFVAGFV 234
Query: 236 ESPKEELKCLKADFIRGCKLLPDGRVRIDVENATEA-------LPKLFELAQKNNVKIL- 287
SP+ ++ +L +G ++I + A P+ L +K N L
Sbjct: 235 GSPQMNFLEMEVRSEGNSVVLQNGEIKIPAKTDPGAKKVILGIRPENVYLEEKPNTLKLE 294
Query: 288 -EVTYHRPTLNDVFLHL 303
EV + ++D LHL
Sbjct: 295 GEVYFAEKLMSDTILHL 311
>pir||E69162 sulfate transport system ATP-binding - Methanobacterium
thermoautotrophicum (strain Delta H)
>gi|2621547|gb|AAB84983.1| (AE000832) sulfate transport
system ATP-binding [Methanobacterium
thermoautotrophicum]
Length = 348
Score = 129 bits (321), Expect = 5e-29
Identities = 75/228 (32%), Positives = 135/228 (58%), Gaps = 15/228 (6%)
Query: 1 MYAIEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKA 60
M+ IE+ + K YGD ++ ++ KV++GE +GP GAGK+T + ++ L +P G+
Sbjct: 2 MHVIELSGITKSYGDIKVLEDVNLKVREGETLGIIGPTGAGKSTLLRIMDLLERPDDGEI 61
Query: 61 IVAGHDVVK-EPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYG--LKG-RELKEKIE 116
+ G +V +P EVR+++G+VFQ+ + R A ++YG ++G R + +++
Sbjct: 62 LFMGENVDDLKPLEVRRRMGMVFQNTPVFRGTVA------ESILYGPRIRGERPHESEVK 115
Query: 117 ELLKFVELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEY 176
++L+ + L + R SGG ++RL +A+ LI+ PE++ LDE T LDP +R+ + +
Sbjct: 116 DVLETMGLKGYGSRRTTELSGGERQRLALAQVLINRPEVVLLDEATSSLDPISRSRMEDV 175
Query: 177 IRTMKEEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKK 224
I E ++T+ TTH + + ++LADRIAI++ I+ G E+ K
Sbjct: 176 IA----ELDVTVIFTTHDLLQGQKLADRIAILNR-SILQTGEPREIFK 218
>pir||E71045 probable ABC transporter - Pyrococcus horikoshii
>gi|3258082|dbj|BAA30765.1| (AP000006) 260aa long
hypothetical ABC transporter [Pyrococcus horikoshii]
Length = 260
Score = 129 bits (321), Expect = 5e-29
Identities = 77/228 (33%), Positives = 129/228 (55%), Gaps = 12/228 (5%)
Query: 2 YAIEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAI 61
Y IE ++L Y AV+ ++FK+K+GE LGPNGAGKTT + VL G
Sbjct: 3 YVIEAKDLTIMYNGVNAVEDLTFKLKRGETLLLLGPNGAGKTTLLRVLAGFHTEYKGYLK 62
Query: 62 VAGHDVVKEPQEVRKKIGIVFQDPSLDR-------ELTAYENMYIHGMIYGLKGRELKEK 114
V G K P EV+ ++ V Q S++ ++ A +Y G+++ RE+ +K
Sbjct: 63 VFG----KSPLEVKDRVAYVPQTFSINSRVPLSVLDVVAMGAIYKRGIVHFNVPREVIKK 118
Query: 115 IEELLKFVELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIW 174
++L+F+ L R + SGG ++R+ IARAL+ EPE+L LDEP LDP+ R +
Sbjct: 119 GIKVLEFLGLKDLSSRSFRELSGGQKQRVIIARALMSEPELLLLDEPLSALDPKARLEVT 178
Query: 175 EYIRTMKEEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEEL 222
+ +KE+ +++ +TTH ++ ++ D++ +I+ K++A GT +E+
Sbjct: 179 SVLSRIKEKFGISMIITTHDINPLAEIGDKVMLINK-KLVAFGTPDEV 225
>pir||E82210 amino acid ABC transporter, ATP-binding protein VC1359 [imported] -
Vibrio cholerae (group O1 strain N16961)
>gi|9655852|gb|AAF94517.1| (AE004215) amino acid ABC
transporter, ATP-binding protein [Vibrio cholerae]
Length = 251
Score = 129 bits (320), Expect = 6e-29
Identities = 78/227 (34%), Positives = 132/227 (57%), Gaps = 11/227 (4%)
Query: 2 YAIEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAI 61
+ I+++++ K YG+F +K I+ VKKGE GP+G+GK+T + + L + G+ I
Sbjct: 9 FMIQIKDMNKWYGEFHVLKNINLNVKKGERIVICGPSGSGKSTMIRCINRLEEHQKGQII 68
Query: 62 VAGHDV---VKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEEL 118
VAG+++ +K + VR+++G+ FQ +L LT EN + + + K+K EE+
Sbjct: 69 VAGNELTEDLKNIELVRREVGMCFQHFNLFPHLTVLENCTLAPI---WVKKMPKDKAEEI 125
Query: 119 -LKFVELWRFKDRPVKY---FSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIW 174
+K++ R ++ KY SGG Q+R+ IAR+L P+I+ DEPT LDP+ +
Sbjct: 126 AMKYLTRVRIPEQADKYPGQLSGGQQQRVAIARSLCMNPQIMLFDEPTSALDPEMVREVL 185
Query: 175 EYIRTMKEEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEE 221
+ + + EE MT+ TH M A+++ADR+ +D G+II E +E
Sbjct: 186 DVMVELAEE-GMTMLCVTHEMGFAKEVADRVIFMDAGEIIEENNPKE 231
>pir||H71241 probable multiple sugar-binding transport ATP-binding protein -
Pyrococcus horikoshii >gi|3256580|dbj|BAA29263.1|
(AP000001) 375aa long hypothetical multiple
sugar-binding transport ATP-binding protein [Pyrococcus
horikoshii]
Length = 375
Score = 128 bits (319), Expect = 8e-29
Identities = 66/228 (28%), Positives = 130/228 (56%), Gaps = 7/228 (3%)
Query: 1 MYAIEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKA 60
M +++ N+ K++GD TAVK +S ++K GE LGP+G GKTTT+ ++ L +PT G+
Sbjct: 4 MAEVKLINIWKRFGDVTAVKDLSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTRGQI 63
Query: 61 IVAGHDVVKEPQE------VRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEK 114
+ + +V +P++ + + +VFQ +L +T Y+N+ + + +E+ ++
Sbjct: 64 YIEDN-LVADPEKGVFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEIDKR 122
Query: 115 IEELLKFVELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIW 174
+ E+ + + L +R + SGG ++R+ + RA+I P++ +DEP LD + R +
Sbjct: 123 VREVAEMLGLTELLNRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMR 182
Query: 175 EYIRTMKEEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEEL 222
++ ++ + +T TH EA + DRIA+++ G++ GT +E+
Sbjct: 183 AELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNKGELQQVGTPDEV 230
>pir||A83621 probable ATP-binding component of ABC transporter PA0206 [imported]
- Pseudomonas aeruginosa (strain PAO1)
>gi|9946041|gb|AAG03595.1|AE004458_10 (AE004458)
probable ATP-binding component of ABC transporter
[Pseudomonas aeruginosa]
Length = 370
Score = 128 bits (319), Expect = 8e-29
Identities = 74/243 (30%), Positives = 128/243 (52%), Gaps = 19/243 (7%)
Query: 2 YAIEVENLVKKYGDF----TAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTS 57
+A+ + + K YGD A+K + ++ E F LGP+G GKTT + ++ PT
Sbjct: 10 HAVSIRAVRKVYGDPESGPVALKRVDLDIRDNEFFTLLGPSGCGKTTLLRMIAGFEFPTE 69
Query: 58 GKAIVAGHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGR-------- 109
G+ ++ G ++ P + + VFQ +L ++ EN+ +GL+ R
Sbjct: 70 GEILLYGENIAARPP-FERPVNTVFQHYALFPHMSIAENL-----AFGLESRPLGRSLGK 123
Query: 110 -ELKEKIEELLKFVELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQ 168
E+ E++ E+L V++ RF DR SGG Q+R+ +ARAL +P +L LDEP LD +
Sbjct: 124 AEIAERVREMLALVQMERFADRRPGQLSGGQQQRVALARALAPQPRVLLLDEPLSALDLK 183
Query: 169 TRAHIWEYIRTMKEEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVGN 228
R + E ++ ++ + +T TH +EA ++DRIA++ G++ G EE+ + GN
Sbjct: 184 LRQAMREELKAIQAKTGITFIFVTHDQEEALTMSDRIAVLSEGQVQQVGPPEEIYERPGN 243
Query: 229 DII 231
+
Sbjct: 244 RFV 246
>pir||G71905 probable ABC transporter, ATP-binding protein - Helicobacter pylori
(strain J99) >gi|4155205|gb|AAD06229.1| (AE001497)
putative abc transporter, ATP-binding protein
[Helicobacter pylori J99]
Length = 240
Score = 128 bits (318), Expect = 1e-28
Identities = 75/224 (33%), Positives = 122/224 (53%), Gaps = 3/224 (1%)
Query: 1 MYAIEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKA 60
M ++ E+L K+ V +S +VK GE+ LGPNGAGKTTT +++ LL+P+ G
Sbjct: 1 MDILKAEHLNKQIKKTKIVSDVSLEVKSGEVVGLLGPNGAGKTTTFYMICGLLEPSGGSV 60
Query: 61 IVAGHDVVKEPQEVRKKIGIVF--QDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEEL 118
+ D+ K P R +GI + Q+ S+ +EL+ EN+ + G +E +EK+E L
Sbjct: 61 YLNDVDLAKYPLHKRSNLGIGYLPQESSIFKELSVEENLALAGESTFKNSKESEEKMESL 120
Query: 119 LKFVELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIR 178
L + ++R SGG +RR+EIARAL+ P+ + LDEP G+DP I I
Sbjct: 121 LDAFNIQAIRERKGMSLSGGERRRVEIARALMKNPKFVLLDEPFAGVDPIAVIDIQRIIE 180
Query: 179 TMKEEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEEL 222
++ + + + +T H + E + R +I G ++A G + E+
Sbjct: 181 SLIGLN-IGVLITDHNVRETLSVCHRAYVIKSGTLLASGNANEI 223
>gb|AAD51830.1|AF175299_5 (AF175299) ThuK [Sinorhizobium meliloti]
Length = 342
Score = 128 bits (318), Expect = 1e-28
Identities = 73/240 (30%), Positives = 128/240 (52%), Gaps = 2/240 (0%)
Query: 1 MYAIEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKA 60
M +++ ++ K +G F +KG+S ++K GE F+GP+G GK+T + ++ L + TSG
Sbjct: 1 MAELQLRDIRKSFGAFDVIKGVSMEIKPGEFMVFVGPSGCGKSTLLRLIAGLEEITSGTL 60
Query: 61 IVAGHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLK 120
G +V + R+ I +VFQ +L +T YENM + G ++ ++++E +
Sbjct: 61 AFDGQ-IVNQLTPSRRGIAMVFQSYALYPHMTVYENMAFGMQLAGKDKQQCRKRVEAAAE 119
Query: 121 FVELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTR-AHIWEYIRT 179
++L + +R + SGG ++R+ I RA++ +P++ DEP LD R A E +
Sbjct: 120 MLQLTPYLERLPRQLSGGQRQRVAIGRAIVRDPKVFLFDEPLSNLDAALRVATRLEIAKL 179
Query: 180 MKEEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVGNDIIYLKLESPK 239
+ H+ T+ TH EA LADRI ++ G + GT EL + + + + SPK
Sbjct: 180 HRSMHKTTMIYVTHDQVEAMTLADRICVLRDGLVEQIGTPLELYETPNSVFVAGFIGSPK 239
>pir||G69192 ABC transporter (glutamine transport ATP-binding protein) -
Methanobacterium thermoautotrophicum (strain Delta H)
>gi|2621782|gb|AAB85201.1| (AE000849) ABC transporter
(glutamine transport ATP-binding protein)
[Methanobacterium thermoautotrophicum]
Length = 220
Score = 127 bits (317), Expect = 1e-28
Identities = 80/222 (36%), Positives = 129/222 (58%), Gaps = 8/222 (3%)
Query: 1 MYAIEVENLVKKY--GDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSG 58
M AIEV +L K + G A+ G++ +V GE + +GP+G+GK+T ++++ L P SG
Sbjct: 1 MKAIEVRDLRKSFDSGRIRALNGVNLEVDGGEFISIMGPSGSGKSTLLNMIGALDVPDSG 60
Query: 59 KAIVAGHDVVKEPQEVR---KKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKI 115
VAG D+ +E R ++IG VFQ +L LTA EN+ I ++ +K ++E+
Sbjct: 61 TICVAGRDLSRERDLSRLRAEEIGFVFQLHNLIPNLTALENVEIP--MFAVKHENMEERA 118
Query: 116 EELLKFVELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWE 175
ELL++V+L R SGG ++R+ IARAL ++P I+ DEPT LD +T +
Sbjct: 119 MELLEYVDLADKAHRKPTELSGGERQRVAIARALANDPSIILADEPTGSLDSRTSQRVLR 178
Query: 176 YIRTMKEEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEG 217
+R ++E+ +T+ + TH D A + I I+D G I+ +G
Sbjct: 179 KLRELQEDEGVTLVVVTHEPDVAAMASRTIRILD-GVIVDDG 219
>pir||H72356 amino acid ABC transporter, ATP-binding protein - Thermotoga
maritima (strain MSB8)
>gi|4981110|gb|AAD35676.1|AE001734_3 (AE001734) amino
acid ABC transporter, ATP-binding protein [Thermotoga
maritima]
Length = 242
Score = 127 bits (316), Expect = 2e-28
Identities = 72/224 (32%), Positives = 126/224 (56%), Gaps = 3/224 (1%)
Query: 1 MYAIEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKA 60
M +++E+L K +G ++GI +VKKGE+ + +GP+G+GK+T + + L + GK
Sbjct: 1 MTVLKIEDLHKYFGKLYVLRGIDLEVKKGEVISIIGPSGSGKSTLLRCINLLEEYQRGKI 60
Query: 61 IVAGHDVV-KEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGM-IYGLKGRELKEKIEEL 118
G + + +R IG+VFQ +L L+ N+ + M + ++ E EK ++L
Sbjct: 61 YFKGELITHRNINRIRSSIGMVFQQFNLFPHLSVLNNLTLAPMKVKNMQKDEAVEKAKKL 120
Query: 119 LKFVELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIR 178
L+ V L + SGG Q+R+ IARAL+ +PE++ DEPT LDP+ + + I+
Sbjct: 121 LERVGLIEKINEKPGNLSGGQQQRVAIARALMMDPELMLFDEPTSALDPELVKEVLDVIK 180
Query: 179 TMKEEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEEL 222
+ + MT+ + TH M A ++DR+ +D G+I+ G E++
Sbjct: 181 DLAQS-GMTMLIVTHEMRFARDVSDRVVFMDEGRIVEMGPPEKI 223
>pir||H72555 probable transporter ATP-binding protein APE1732 - Aeropyrum pernix
(strain K1) >gi|5105420|dbj|BAA80733.1| (AP000062) 358aa
long hypothetical transporter ATP-binding protein
[Aeropyrum pernix]
Length = 358
Score = 127 bits (316), Expect = 2e-28
Identities = 73/228 (32%), Positives = 124/228 (54%), Gaps = 13/228 (5%)
Query: 1 MYAIEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKA 60
M I +E++ K++G+ A+ +S + GEIF LGP+G GKTTT+ V+ P G+
Sbjct: 1 MAGIRLESVTKRFGNTVALDRVSLNISDGEIFTLLGPSGCGKTTTLRVIAGFETPDEGRV 60
Query: 61 IVAGHDVVK-EPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGR-----ELKEK 114
+ DV +P E + +VFQ+ +L + ++N+ YGLK R E+ +
Sbjct: 61 YIGSRDVTMLKPYE--RNTAMVFQNYALWPHMRVFDNI-----AYGLKLRKLPRSEIVRR 113
Query: 115 IEELLKFVELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIW 174
+ + +E+ DR SGG Q+R+ +ARA++ EPE+L +DEP LD R +
Sbjct: 114 VRWAAELLEIDHLLDRYPHQLSGGQQQRVAVARAIVTEPEVLLMDEPLSNLDAHLRLKMR 173
Query: 175 EYIRTMKEEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEEL 222
E I +++ +TI TH +EA ++ R+A+++ G++ GT E+
Sbjct: 174 EEIVRLQKRLGVTIVYVTHDQEEALSISHRVAVMNRGRVEQVGTPMEV 221
>pir||H75151 abc transporter, ATP-binding protein PAB0249 - Pyrococcus abyssi
(strain Orsay) >gi|5457805|emb|CAB49295.1| (AJ248284)
ABC transporter, ATP-binding protein [Pyrococcus abyssi]
Length = 280
Score = 127 bits (315), Expect = 2e-28
Identities = 78/231 (33%), Positives = 124/231 (52%), Gaps = 9/231 (3%)
Query: 1 MYAIEVENLVKKYGDFTA--VKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPT-- 56
M IEVEN+ KYG+ A ++ ++ VKKGE +GP+G+GK+T L L+ +
Sbjct: 1 MNIIEVENVSFKYGNSKAYSLRDVNLNVKKGEFLGIIGPSGSGKSTFCLTLNGLIPHSIN 60
Query: 57 ---SGKAIVAGHDVVKEP-QEVRKKIGIVFQDPSLDR-ELTAYENMYIHGMIYGLKGREL 111
G V G + + E+ ++G+VFQ+P +T E + G++ E+
Sbjct: 61 GEFEGNVFVDGLNTREHSVAELSTRVGLVFQNPDSQLFNMTVLEEVAFALENLGVEREEM 120
Query: 112 KEKIEELLKFVELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRA 171
+I LK V+LW ++ SGG ++RL IA L+ +P++L LDEPT LDP R
Sbjct: 121 WRRIRWALKLVKLWDKREEFPPNLSGGEKQRLAIASVLVMKPKVLVLDEPTSQLDPLGRE 180
Query: 172 HIWEYIRTMKEEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEEL 222
+ +R + +E ++TI L H D + ADRI + D G+++ EG EE+
Sbjct: 181 EVLSLVRLLNKEEKITIILVEHNTDFLLEHADRIVVFDGGRVVMEGKPEEV 231
>sp|P77795|YDCT_ECOLI HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PROTEIN YDCT
>gi|7445684|pir||D64896 probable ABC-type transport
protein b1441 - Escherichia coli
>gi|1742349|dbj|BAA15070.1| (D90783)
Spermidine/putrescine transport ATP-binding protein
PotA. [Escherichia coli] >gi|1742356|dbj|BAA15076.1|
(D90784) Spermidine/putrescine transport ATP-binding
protein PotA. [Escherichia coli]
>gi|1787712|gb|AAC74523.1| (AE000241) putative
ATP-binding component of a transport system [Escherichia
coli K12]
Length = 337
Score = 126 bits (314), Expect = 3e-28
Identities = 69/212 (32%), Positives = 117/212 (54%), Gaps = 1/212 (0%)
Query: 2 YAIEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKAI 61
YA+E +N+ + YGD AV G+S +K GE F+ LGP+G+GKTT + ++ + + G
Sbjct: 3 YAVEFDNVSRLYGDVRAVDGVSIAIKDGEFFSMLGPSGSGKTTCLRLIAGFEQLSGGAIS 62
Query: 62 VAGHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLKF 121
+ G P R + VFQD +L ++ +N+ M+ G+ ++ +E L+
Sbjct: 63 IFGKPASNLPPWERD-VNTVFQDYALFPHMSILDNVAYGLMVKGVNKKQRHAMAQEALEK 121
Query: 122 VELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTMK 181
V L R SGG ++R+ IARAL++EP +L LDEP LD + R + ++ ++
Sbjct: 122 VALGFVHQRKPSQLSGGQRQRVAIARALVNEPRVLLLDEPLGALDLKLREQMQLELKKLQ 181
Query: 182 EEHEMTIFLTTHYMDEAEQLADRIAIIDHGKI 213
+ +T TH EA ++DR+A+ ++G+I
Sbjct: 182 QSLGITFIFVTHDQGEALSMSDRVAVFNNGRI 213
>pir||C64609 ABC transporter, ATP-binding protein - Helicobacter pylori (strain
26695) >gi|2313839|gb|AAD07765.1| (AE000584) ABC
transporter, ATP-binding protein [Helicobacter pylori
26695]
Length = 240
Score = 126 bits (314), Expect = 3e-28
Identities = 74/224 (33%), Positives = 123/224 (54%), Gaps = 3/224 (1%)
Query: 1 MYAIEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKA 60
M ++ E+L K+ V +S +VK GE+ LGPNGAGKTTT +++ LL+P+ G
Sbjct: 1 MDILKAEHLNKQIKKTKIVSDVSLEVKSGEVVGLLGPNGAGKTTTFYMICGLLEPSGGSV 60
Query: 61 IVAGHDVVKEPQEVRKKIGIVF--QDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEEL 118
+ ++ K P R +GI + Q+ S+ +EL+ EN+ + G +E +EK+E L
Sbjct: 61 YLNDVNLAKYPLHKRSNLGIGYLPQESSIFKELSVEENLALAGESTFKNSKESEEKMESL 120
Query: 119 LKFVELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIR 178
L + ++R SGG +RR+EIARAL+ P+ + LDEP G+DP I + I
Sbjct: 121 LDAFNIQAIRERKGMSLSGGERRRVEIARALMKNPKFVLLDEPFAGVDPIAVIDIQKIIE 180
Query: 179 TMKEEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEEL 222
++ + + + +T H + E + R +I G ++A G + E+
Sbjct: 181 SLIGLN-IGVLITDHNVRETLSVCHRAYVIKSGTLLASGNANEI 223
>pir||C72044 ABC transporter ATPase - Chlamydophila pneumoniae (strain CWL029)
>gi|4377027|gb|AAD18862.1| (AE001653) ABC Transporter
ATPase [Chlamydophila pneumoniae CWL029]
>gi|8163348|gb|AAF73617.1| (AE002166) ABC transporter,
ATP-binding protein [Chlamydophila pneumoniae AR39]
>gi|8979095|dbj|BAA98930.1| (AP002547) ABC transporter
ATPase [Chlamydophila pneumoniae J138]
Length = 240
Score = 126 bits (314), Expect = 3e-28
Identities = 79/225 (35%), Positives = 122/225 (54%), Gaps = 5/225 (2%)
Query: 1 MYAIEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKA 60
M + V NLVKKY +SF++ GEI LGPNGAGKTT ++ L++P SGK
Sbjct: 1 MPILSVCNLVKKYNKKPVTNDVSFQINPGEIVGLLGPNGAGKTTAFYLTVGLIRPDSGKI 60
Query: 61 IVAGHDVVKEPQEVRKKIGIVF--QDPSLDRELTAYENMY-IHGMIYGLKGRELKEKIEE 117
I DV K+ + R ++GI + Q+P++ +ELT +N+ I +IY + ++ +
Sbjct: 61 IFKNVDVTKKTMDHRARLGIGYLAQEPTIFKELTVQDNLICILEIIYKAR-KQQSHLLNT 119
Query: 118 LLKFVELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYI 177
L+ ++L + SGG +RRLEIA L P +L LDEP +DP ++ +Y+
Sbjct: 120 LVDDLQLGSCLHKKAGTLSGGERRRLEIACVLALNPSVLLLDEPFANVDPLVIQNV-KYL 178
Query: 178 RTMKEEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEEL 222
+ + I +T H E +ADR +I GKI EG+S ++
Sbjct: 179 IKILAGRGIGILITDHNAKELLSIADRCYLIIDGKIFFEGSSSQM 223
>gi|11499064 ABC transporter, ATP-binding protein [Archaeoglobus fulgidus]
>gi|7445944|pir||D69433 ABC transporter, ATP-binding
protein homolog - Archaeoglobus fulgidus
>gi|2649101|gb|AAB89781.1| (AE001001) ABC transporter,
ATP-binding protein [Archaeoglobus fulgidus]
Length = 226
Score = 126 bits (313), Expect = 4e-28
Identities = 78/225 (34%), Positives = 129/225 (56%), Gaps = 10/225 (4%)
Query: 1 MYAIEVENLVK----KYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPT 56
M IE+ ++ K Y + A+ G+S +V+ GE A +GP+G+GK+T ++++ L KPT
Sbjct: 1 MKVIELVDVYKIYRTAYYEVHALDGVSMEVEAGEFVAIMGPSGSGKSTLLNMIGCLDKPT 60
Query: 57 SGKAIVAGHDVV----KEPQEVRK-KIGIVFQDPSLDRELTAYENMYIHGMIYGLKGREL 111
G+ I+ G +E ++R+ IG +FQ +L LTA EN+ + + G+ E
Sbjct: 61 KGEVIINGVKTSGLSDRELTKLRRDSIGFIFQQYNLIPTLTALENVELPMIFRGVARAER 120
Query: 112 KEKIEELLKFVELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRA 171
+ + +ELLK V + DR + SGG Q+R+ IARAL + P+IL DEPT LD ++
Sbjct: 121 ERRAKELLKVVGIEELADRRPREMSGGQQQRVAIARALANNPKILLCDEPTGNLDTKSGR 180
Query: 172 HIWEYIRTMKEEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAE 216
+ ++ + EE+ +T+ L TH +E ADR+ I GK++ +
Sbjct: 181 QVMGILKNLNEENGVTVVLVTHDPSLSE-YADRVIRIRDGKVVED 224
>pir||F82934 ABC transporter UU093 [imported] - Ureaplasma urealyticum
>gi|6899047|gb|AAF30499.1|AE002109_2 (AE002109) ABC
transporter [Ureaplasma urealyticum]
Length = 236
Score = 125 bits (312), Expect = 5e-28
Identities = 76/234 (32%), Positives = 127/234 (53%), Gaps = 9/234 (3%)
Query: 2 YAIEVENLVKKYGDFT-AVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKA 60
+ +EV+NL K Y V +SF VK+GEI AF+G NG+GKTTT+ + G
Sbjct: 5 FILEVKNLTKIYKKSNQGVFDLSFNVKRGEIHAFIGENGSGKTTTIKSIINAYTNYKGSI 64
Query: 61 IVAGHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLK 120
++ G D K P+ +KIG V + ELT ++ +Y + L ++ E+I L+
Sbjct: 65 LIDGFDN-KTPKS-HEKIGYVPEIALFPSELTTFQYLYSFARLSNLNKKQAIERIHNFLE 122
Query: 121 FVELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTM 180
+ K++ FS G ++++ + +AL+H+PE++ LDEPT LDP R E+ +
Sbjct: 123 KFRISDLKNKKPINFSSGQKKKVILIQALLHDPELIILDEPTANLDPSAR---HEFNNIL 179
Query: 181 KEEHEM--TIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTS-EELKKLVGNDII 231
KE HE TIF+ +H + E + D + +I GK++ G + L+K+ + ++
Sbjct: 180 KELHEQNKTIFICSHILKEMDTYVDSLTLIHKGKLVYSGHKYDALEKIYYDSVL 233
>gb|AAF70304.1|AF259974_1 (AF259974) MalK [Vibrio cholerae]
Length = 373
Score = 125 bits (312), Expect = 5e-28
Identities = 76/269 (28%), Positives = 133/269 (49%), Gaps = 7/269 (2%)
Query: 1 MYAIEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKA 60
M ++ ++N+ K YGD K + ++++GE F+GP+G GK+T + + L TSG
Sbjct: 1 MASVTLKNVCKAYGDVLISKNVDLEIQEGEFVVFVGPSGCGKSTLLRCIAGLEDITSGDL 60
Query: 61 IVAGHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLK 120
+ G + + + ++ +G+VFQ +L L Y+NM + E+K++++ +
Sbjct: 61 YI-GEQRMNDVEPSKRGVGMVFQSYALYPHLNLYDNMSFGLKLSKADKSEIKKRVDHAAE 119
Query: 121 FVELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTM 180
++L DR K SGG ++R+ I R L+ +P + LDEP LD R + I +
Sbjct: 120 ILQLSHLLDRQPKALSGGQRQRVAIGRTLVSQPNVFLLDEPLSNLDAALRVQMRSEITKL 179
Query: 181 KEEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVGNDIIYLKLESPKE 240
+ + T+ TH EA +AD+I ++D G + G EL N + + SPK
Sbjct: 180 QRKLGCTMIYVTHDQVEAMTMADKIVVLDAGFVSQVGKPLELYHYPQNRFVAGFIGSPKM 239
Query: 241 ELKCLKADFIRGCKLLPDGRVRIDVENAT 269
+ FI G + RV++ + N T
Sbjct: 240 NFMSV---FIEG---VEKDRVQVQLSNGT 262
>pir||A82398 maltose/maltodextrin ABC transporter, ATP-binding protein VCA0946
[imported] - Vibrio cholerae (group O1 strain N16961)
>gi|9658383|gb|AAF96842.1| (AE004421)
maltose/maltodextrin ABC transporter, ATP-binding
protein [Vibrio cholerae]
Length = 373
Score = 125 bits (312), Expect = 5e-28
Identities = 76/269 (28%), Positives = 133/269 (49%), Gaps = 7/269 (2%)
Query: 1 MYAIEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKA 60
M ++ ++N+ K YGD K + ++++GE F+GP+G GK+T + + L TSG
Sbjct: 1 MASVTLKNVCKAYGDVLISKNVDLEIQEGEFVVFVGPSGCGKSTLLRCIAGLEDITSGDL 60
Query: 61 IVAGHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLK 120
+ G + + + ++ +G+VFQ +L L Y+NM + E+K++++ +
Sbjct: 61 YI-GEQRMNDVEPSKRGVGMVFQSYALYPHLNLYDNMSFGLKLSKADKSEIKKRVDHAAE 119
Query: 121 FVELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTM 180
++L DR K SGG ++R+ I R L+ +P + LDEP LD R + I +
Sbjct: 120 ILQLSHLLDRQPKALSGGQRQRVAIGRTLVSQPNVFLLDEPLSNLDAALRVQMRSEITKL 179
Query: 181 KEEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVGNDIIYLKLESPKE 240
+ + T+ TH EA +AD+I ++D G + G EL N + + SPK
Sbjct: 180 QRKLGCTMIYVTHDQVEAMTMADKIVVLDAGFVSQVGKPLELYHYPQNRFVAGFIGSPKM 239
Query: 241 ELKCLKADFIRGCKLLPDGRVRIDVENAT 269
+ FI G + RV++ + N T
Sbjct: 240 NFMSV---FIEG---VEKDRVQVQLSNGT 262
>pir||E83222 NosF protein PA3394 [imported] - Pseudomonas aeruginosa (strain
PAO1) >gi|9949530|gb|AAG06782.1|AE004760_10 (AE004760)
NosF protein [Pseudomonas aeruginosa]
Length = 304
Score = 125 bits (312), Expect = 5e-28
Identities = 71/224 (31%), Positives = 124/224 (54%), Gaps = 7/224 (3%)
Query: 1 MYAIEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKA 60
M +E++ +YG TA+ G+ +++ GE+ LG NGAGKTTT+ ++ LL P+ G+
Sbjct: 1 MSLVEIDGATLRYGALTALSGLDLRLEPGEVLGLLGHNGAGKTTTIKLVLGLLAPSEGRV 60
Query: 61 IVAGHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLK 120
V GHD E R+++G + ++ + +L+ E + + G+ E +E+
Sbjct: 61 RVLGHDA--RSLEARRQLGYLPENVTFYPQLSGAETLRHFARLKGVAPAEAARLLEQ--- 115
Query: 121 FVELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTM 180
V L R +K +S GM++RL +A+AL+ EP +L LDEPT+GLDP +++ + +
Sbjct: 116 -VGLGHAARRRLKTYSKGMRQRLGLAQALLGEPRLLLLDEPTVGLDPLATVELYQLLDRL 174
Query: 181 KEEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKK 224
+ + I L +H + E DR AI+ G++ G+ EL++
Sbjct: 175 RGQ-GTGIVLCSHVLPGVETHIDRAAILAGGRLQVAGSLAELRR 217
>sp|P19844|NOSF_PSEST COPPER TRANSPORT ATP-BINDING PROTEIN NOSF >gi|95000|pir||S13584
nosF protein - Pseudomonas stutzeri
>gi|45849|emb|CAA37716.1| (X53676) ATP-binding protein,
peripheral [Pseudomonas stutzeri]
Length = 308
Score = 125 bits (310), Expect = 9e-28
Identities = 92/316 (29%), Positives = 167/316 (52%), Gaps = 13/316 (4%)
Query: 1 MYAIEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKA 60
M A+E++ + ++YG T + ++ + +GE+ G NGAGKTT++ ++ LL P+ G+
Sbjct: 1 MNAVEIQGVSQRYGSMTVLHDLNLNLGEGEVLGLFGHNGAGKTTSMKLILGLLSPSEGQV 60
Query: 61 IVAGHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLK 120
V G +PQ VR+++G + ++ + +L+ E + LKG L + ++ELL+
Sbjct: 61 KVLGR-APNDPQ-VRRQLGYLPENVTFYPQLSGRETLRHFAR---LKGAALTQ-VDELLE 114
Query: 121 FVELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTM 180
V L DR VK +S GM++RL +A+AL+ EP +L LDEPT+GLDP ++ I +
Sbjct: 115 QVGLAHAADRRVKTYSKGMRQRLGLAQALLGEPRLLLLDEPTVGLDPIATQDLYLLIDRL 174
Query: 181 KEEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVGNDI-IYLKLESPK 239
+ + +I L +H + E +R AI+ G + A G+ +L+ G + I S +
Sbjct: 175 R-QRGTSIILCSHVLPGVEAHINRAAILAKGCLQAVGSLSQLRAEAGLPVRIRASGISER 233
Query: 240 EELKCLKADFIRGCKLLPDGRVRIDVENATEALPKLFELAQKNNVKILEVTYHRPTLNDV 299
+ D + L + + + N L L +L + + +E+ H+P+L D+
Sbjct: 234 DSWLQRWTDAGHSARGLSESSIEVVAVNG-HKLVLLRQLLGEGEPEDIEI--HQPSLEDL 290
Query: 300 FLHLTGR--EIRDEEG 313
+ + R ++R +EG
Sbjct: 291 YRYYMERAGDVRAQEG 306
>pir||H69746 ABC transporter (binding protein) homolog ybdA - Bacillus subtilis
>gi|2632481|emb|CAB11989.1| (Z99105) similar to ABC
transporter (binding protein) [Bacillus subtilis]
>gi|3599617|dbj|BAA33092.1| (AB006424) ybdA [Bacillus
subtilis]
Length = 239
Score = 125 bits (310), Expect = 9e-28
Identities = 71/216 (32%), Positives = 123/216 (56%), Gaps = 3/216 (1%)
Query: 1 MYAIEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKA 60
M ++V+NL K Y + V+ +SF +++GEI A LGPNGAGKTTT+ LT L KP G
Sbjct: 1 MQLMQVQNLSKCYRNGDGVEHLSFSIQRGEIVALLGPNGAGKTTTIRCLTGLYKPDKGDI 60
Query: 61 IVAGHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRELKEKIEELLK 120
++ G V+KK+ ++ P L LTA E++ Y +++KE++ LK
Sbjct: 61 LIEGSP--PGDINVQKKVALIPDQPYLYPALTAAEHIQFRARGYHPGKKDVKERVYHALK 118
Query: 121 FVELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYIRTM 180
V L ++ S G ++R+ +A A++ + + LDEPT+GLD ++ + +++T
Sbjct: 119 EVHLEEKANQLCGQLSRGQKQRVVLAGAIVQDALLYILDEPTVGLDIPSKQWLSNWLKT- 177
Query: 181 KEEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAE 216
K + + F++TH ++ + ADR+ +I GK++ +
Sbjct: 178 KTDQGCSAFVSTHSLEFVIETADRVILIRDGKLMQD 213
>pir||F82386 amino acid ABC transporter, ATP-binding protein VCA1037 [imported]
- Vibrio cholerae (group O1 strain N16961)
>gi|9658480|gb|AAF96931.1| (AE004429) amino acid ABC
transporter, ATP-binding protein [Vibrio cholerae]
Length = 239
Score = 124 bits (309), Expect = 1e-27
Identities = 83/226 (36%), Positives = 123/226 (53%), Gaps = 10/226 (4%)
Query: 1 MYAIEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKA 60
M IE + K YG F A+K IS V KGEI GP+G+GK+T + + L SG+
Sbjct: 1 MKVIEFHQVSKWYGQFQALKSISLTVNKGEIVVICGPSGSGKSTLIRTVNGLESIDSGEI 60
Query: 61 IVAGHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGM-IYGLKGRELKEKIEELL 119
IV + E KIG+VFQ +L LT EN+ + + L +E KE+ L
Sbjct: 61 IVLPE--LDERTRRSGKIGMVFQHFNLFPHLTVLENLTLAPIRTLKLSAQEAKERAYHFL 118
Query: 120 KFVELWRFKDRPVKY---FSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEY 176
+ V++ D+ KY SGG Q+R+ IAR+L +PEIL DEPT LDP+T + E
Sbjct: 119 QRVKI---TDQTHKYPIQLSGGQQQRVAIARSLCMQPEILLFDEPTSALDPETINEVLEV 175
Query: 177 IRTMKEEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEEL 222
+ + ++ +T+ TH M A ++A R+ +D G+I+ G+ E+L
Sbjct: 176 MVDLAQD-GITMMCVTHEMGFARKVAHRVMFMDEGEILEVGSPEQL 220
>sp|P55604|Y4OS_RHISN PROBABLE ABC TRANSPORTER ATP-BINDING PROTEIN Y4OS
>gi|2182563|gb|AAB91805.1| (AE000089) Y4oS [Rhizobium
sp. NGR234]
Length = 371
Score = 123 bits (306), Expect = 3e-27
Identities = 70/241 (29%), Positives = 128/241 (53%), Gaps = 7/241 (2%)
Query: 1 MYAIEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKA 60
M + + N+ K+YG T + +SF+++ GE +GP+G GK+T + +L L + SG
Sbjct: 17 MTDVTIRNVTKRYGALTVIPQLSFRIEDGEFVVLVGPSGCGKSTLLRMLAGL-EEISGGD 75
Query: 61 IVAGHDVVKEPQEVRKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGR---ELKEKIEE 117
++ G DV+ + + + IVFQ+ +L +T ENM G L+ R E+ E++++
Sbjct: 76 LLMGADVINDRPAKERDMAIVFQNYALYPHMTVAENM---GFALKLRKRPRAEIDERVDK 132
Query: 118 LLKFVELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTRAHIWEYI 177
+ L + DR + SGG ++R+ + RA++ +P++ DEP LD + R + I
Sbjct: 133 AAAILGLGKLLDRYPRALSGGQRQRVAMGRAIVRDPQVFLFDEPLSNLDAKLRVQMRAEI 192
Query: 178 RTMKEEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVGNDIIYLKLES 237
+ + + ++T TH EA +AD+I +++ G++ GT EL N + + S
Sbjct: 193 KALHQRLKITTVYVTHDQIEAMTMADKIVVMNEGRVEQMGTPLELYDRPANIFVAGFIGS 252
Query: 238 P 238
P
Sbjct: 253 P 253
>sp|O30506|AOTP_PSEAE ARGININE/ORNITHINE TRANSPORT ATP-BINDING PROTEIN AOTP
>gi|11277315|pir||T44458 histidine/ornithine transport
protein aotP [imported] - Pseudomonas aeruginosa
>gi|11347446|pir||A83535 arginine/ornithine transport
protein AotP PA0892 [imported] - Pseudomonas aeruginosa
(strain PAO1) >gi|2668599|gb|AAC71074.1| (AF012537)
ATPase [Pseudomonas aeruginosa]
>gi|9946792|gb|AAG04281.1|AE004523_9 (AE004523)
arginine/ornithine transport protein AotP [Pseudomonas
aeruginosa]
Length = 254
Score = 123 bits (306), Expect = 3e-27
Identities = 72/239 (30%), Positives = 130/239 (54%), Gaps = 20/239 (8%)
Query: 1 MYAIEVENLVKKYGDFTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKPTSGKA 60
MY +EV++L K+YG +KG+S K G++ + +G +G+GK+T + + L +P +GK
Sbjct: 1 MYKLEVQDLHKRYGSHEVLKGVSLAAKAGDVISIIGSSGSGKSTFLRCINLLEQPHAGKI 60
Query: 61 IVAGHDVVKEP--------------QEVRKKIGIVFQDPSLDRELTAYENMY---IHGMI 103
++ G ++ P Q +R ++ +VFQ +L ++A EN+ +H +
Sbjct: 61 LLNGEELKLVPGRDGALKAADSRQLQRMRSRLSMVFQHFNLWSHMSALENVIEAPVH--V 118
Query: 104 YGLKGRELKEKIEELLKFVELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTI 163
G+ +E EK E L V + KD + SGG Q+R+ IARAL EPE++ DEPT
Sbjct: 119 LGVSKKEAIEKAEHYLAKVGVAHRKDAYPAHMSGGEQQRVAIARALAVEPEVMLFDEPTS 178
Query: 164 GLDPQTRAHIWEYIRTMKEEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEEL 222
LDP+ + + ++ + +E T+ + TH M A ++++++ + G + G +E+
Sbjct: 179 ALDPELVGEVLKVMQDLAQEGR-TMVVVTHEMGFAREVSNQLVFLHKGLVEEHGCPKEV 236
>dbj|BAB06418.1| (AP001516) ABC transporter (ATP-binding protein) [Bacillus
halodurans]
Length = 251
Score = 123 bits (306), Expect = 3e-27
Identities = 76/251 (30%), Positives = 133/251 (52%), Gaps = 13/251 (5%)
Query: 1 MYAIEVENLVKKYGD-----FTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVLTTLLKP 55
M +E +L K YG+ + +S +VKKG+ A +GP+G+GKTT +++L+ + P
Sbjct: 1 MIILEANHLHKVYGEGGTRTTVGLDQVSLRVKKGDFLAIMGPSGSGKTTLLNLLSGIDAP 60
Query: 56 TSGKAIVAGHDVVKEPQEV-----RKKIGIVFQDPSLDRELTAYENMYIHGMIYGLKGRE 110
TSG ++ G D+ K RK++G VFQ+ +L LT EN+ + ++ +
Sbjct: 61 TSGTIVINGDDISKMDGNQLALFRRKELGFVFQEFNLLDSLTVKENIMVPMILEKKSAKH 120
Query: 111 LKEKIEELLKFVELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQTR 170
++EK +E++ + ++ + SGG Q+R+ ++RAL++EP ILF DEPT LD ++
Sbjct: 121 MEEKAKEVMSIFGIDGLANKYPYHLSGGQQQRVAVSRALVNEPSILFADEPTGNLDSKSS 180
Query: 171 AHIWEYIRTMKEEHEMTIFLTTHYMDEAEQLADRIAIID---HGKIIAEGTSEELKKLVG 227
I E + ++ TI L TH + A + I D H K+ +G++ E +
Sbjct: 181 KVIMECFEQIVNHYQTTILLVTHDVFAANYCHHVMFINDGTIHSKLTKKGSNAEFLDQIM 240
Query: 228 NDIIYLKLESP 238
+ + L +P
Sbjct: 241 DSLALLGGTTP 251
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.320 0.140 0.401
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 122400233
Number of Sequences: 2977
Number of extensions: 5239819
Number of successful extensions: 26150
Number of sequences better than 1.0e-10: 2148
Number of HSP's better than 0.0 without gapping: 551
Number of HSP's successfully gapped in prelim test: 1597
Number of HSP's that attempted gapping in prelim test: 21439
Number of HSP's gapped (non-prelim): 2603
length of query: 328
length of database: 189,106,746
effective HSP length: 56
effective length of query: 272
effective length of database: 155,591,474
effective search space: 42320880928
effective search space used: 42320880928
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.8 bits)
S2: 165 (68.7 bits)