BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB1929 (PAB1929) DE:ABC TRANSPORTER, ATP-BINDING PROTEIN
(633 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||F75107 abc transporter, ATP-binding protein PAB1929 - Pyroc... 1281 0.0
pir||G71026 hypothetical protein PH1507 - Pyrococcus horikoshii ... 1244 0.0
gi|11498669 ABC transporter, ATP-binding protein, putative [Arch... 725 0.0
pir||D72453 hypothetical protein APE2272 - Aeropyrum pernix (str... 686 0.0
sp|O34900|YTMN_BACSU PROBABLE AMINO-ACID ABC TRANSPORTER ATP-BIN... 93 8e-18
emb|CAA11724.1| (AJ223978) putative ABC transporter, YvrO [Bacil... 88 3e-16
pir||C82957 probable ATP-binding component of ABC transporter PA... 87 4e-16
dbj|BAA76299.1| (AB003329) LAMDR1 [Leishmania amazonensis] 87 6e-16
pir||H82709 colicin V secretion ABC transporter ATP-binding prot... 86 1e-15
emb|CAB61549.1| (AL133171) putative ABC transporter [Streptomyce... 85 3e-15
pir||F71800 ABC transporter, ATP-binding protein - Helicobacter ... 84 4e-15
emb|CAB69672.1| (AL137165) probable ABC transporter protein, ATP... 84 4e-15
gb|AAC45666.1| (AF010307) AbcC [Helicobacter pylori] 84 5e-15
sp|P44785|ABC_HAEIN ATP-BINDING PROTEIN ABC >gi|1073885|pir||C64... 84 5e-15
pir||D70020 ABC transporter (ATP-binding protein) homolog yusC -... 83 7e-15
pir||T22813 hypothetical protein F57A10.3 - Caenorhabditis elega... 83 7e-15
gb|AAA02976.1| (L06062) multi drug resistance P-glycoprotein [Le... 83 7e-15
gb|AAC31907.1| (AF075709) ABC transporter ATP-binding subunit [P... 83 9e-15
gb|AAA02977.1| (L01572) P-glycoprotein [Leishmania donovani] 83 9e-15
pir||G69192 ABC transporter (glutamine transport ATP-binding pro... 83 1e-14
emb|CAB01940.1| (Z79692) ExpD1 [Sinorhizobium meliloti] 82 1e-14
pir||G72255 ABC transporter, ATP-binding protein - Thermotoga ma... 82 1e-14
pir||A71243 probable maltose/maltodextrin transport ATP-binding ... 82 1e-14
dbj|BAB04005.1| (AP001508) ABC transporter (ATP-binding protein)... 82 1e-14
dbj|BAA77876.1| (D83536) ATP-binding protein ABC. [Escherichia c... 82 2e-14
sp|P54537|YQIZ_BACSU PROBABLE AMINO-ACID ABC TRANSPORTER ATP-BIN... 82 2e-14
pir||G81955 ABC-transport system ATP-binding protein NMA0393 [im... 82 3e-14
pir||E72757 probable phosphate transport ATP-binding protein pst... 81 3e-14
pir||G81012 spermidine/putrescine ABC transporter, ATP-binding p... 81 3e-14
dbj|BAB07610.1| (AP001520) ABC transporter (ATP-binding protein)... 81 3e-14
pir||T32865 hypothetical protein ZK484.2 - Caenorhabditis elegan... 80 6e-14
emb|CAB41455.1| (Y08703) ABC transporter [Sinorhizobium meliloti] 80 6e-14
pir||H64716 ABC transporter, ATP-binding protein - Helicobacter ... 80 6e-14
pir||G83214 probable ATP-binding component of ABC transporter PA... 80 6e-14
pir||F72510 probable multiple sugar-binding transport ATP-bindin... 80 6e-14
gi|10955699 ABC transporter [Yersinia pestis] >gi|7467316|pir||T... 80 7e-14
gi|10955870 putative ABC transporter [Yersinia pestis] >gi|74674... 80 7e-14
gb|AAB69130.1| (U63320) P-glycoprotein [Leishmania tropica] 80 7e-14
gi|11498288 glutamine ABC transporter, ATP-binding protein (glnQ... 80 7e-14
gi|9955963 ATP-binding cassette, sub-family B, member 6 [Homo sa... 80 7e-14
gb|AAC28653.1| (AF070598) ABC transporter [Homo sapiens] 80 7e-14
gb|AAG33617.1|AF308472_1 (AF308472) ATP-binding cassette half-tr... 80 7e-14
gb|AAA88774.1| (U47048) MtfB [Escherichia coli] 80 1e-13
pir||H72704 probable iron (III) dicitrate transport ATP-binding ... 80 1e-13
pir||H70432 ABC transporter - Aquifex aeolicus >gi|2983897|gb|AA... 79 1e-13
pir||D75609 amino acid ABC transporter, ATP-binding protein - De... 79 1e-13
gb|AAF61810.1| (AF129811) unknown [Moraxella catarrhalis] 79 2e-13
sp|P73450|NRTC_SYNY3 NITRATE TRANSPORT ATP-BINDING PROTEIN NRTC ... 79 2e-13
pir||T37701 probable abc transporter - fission yeast (Schizosacc... 79 2e-13
pir||E71130 probable oligopeptide transport ATP-binding protein ... 79 2e-13
gb|AAF23272.1|AF101263_2 (AF121672) ABC transporter MreA [Staphy... 79 2e-13
emb|CAB65561.1| (AL136058) probable amino acid ABC transporter p... 79 2e-13
gb|AAF99566.1| (AF167161) unknown [Staphylococcus aureus] 79 2e-13
sp|O14286|YETI_SCHPO PUTATIVE ABC TRANSPORTER C8C9.18 IN CHROMOS... 79 2e-13
pir||E82539 ABC transporter ATP-binding protein XF2582 [imported... 78 2e-13
pir||D69180 ABC transporter - Methanobacterium thermoautotrophic... 78 2e-13
pir||H82381 toxin secretion ATP-binding protein VCA1084 [importe... 78 2e-13
emb|CAB65650.1| (AJ252160) putative ABC-transporter ATP-binding ... 78 2e-13
sp|P44531|AFUC_HAEIN PUTATIVE FERRIC TRANSPORT ATP-BINDING PROTE... 78 3e-13
pir||B64856 probable ABC-type transport protein ycfV - Escherich... 78 3e-13
pir||B70483 ABC transporter - Aquifex aeolicus >gi|2984332|gb|AA... 78 3e-13
sp|P75957|YCFV_ECOLI HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 78 3e-13
pir||C82266 ABC transporter, ATP-binding protein VC0907 [importe... 78 3e-13
dbj|BAA35937.1| (D90747) Heterocyst maturation protein (devA) ho... 78 3e-13
sp|Q02592|HMT1_SCHPO HEAVY METAL TOLERANCE PROTEIN PRECURSOR >gi... 78 4e-13
pir||T41582 heavy metal tolerance protein precursor - fission ye... 78 4e-13
pir||A82184 ABC transporter, ATP-binding protein VC1568 [importe... 78 4e-13
pir||S25198 vacuolar membrane protein HMT1 - fission yeast (Sch... 78 4e-13
sp|Q06034|MDR1_LEIEN MULTIDRUG RESISTANCE PROTEIN 1 (P-GLYCOPROT... 78 4e-13
sp|Q57293|AFUC_ACTPL FERRIC TRANSPORT ATP-BINDING PROTEIN AFUC >... 78 4e-13
sp|P75370|P29_MYCPN PROBABLE ABC TRANSPORTER ATP-BINDING PROTEIN... 77 5e-13
pir||D69068 methyl coenzyme M reductase system, component A2 hom... 77 5e-13
pir||T36053 probable ABC-type transport protein cydCD - Streptom... 77 5e-13
dbj|BAB03891.1| (AP001507) amino acid ABC transporter (ATP-bindi... 77 5e-13
dbj|BAB11402.1| (AP002543) ABC transporter-like protein [Arabido... 77 5e-13
sp|P34712|MDR1_CAEEL MULTIDRUG RESISTANCE PROTEIN 1 (P-GLYCOPROT... 77 6e-13
pir||S25576 probable transport protein mt2 - rat >gi|407479|emb|... 77 6e-13
pir||S38402 probable transport protein mt2 - rat >gi|407481|emb|... 77 6e-13
sp|Q50294|Y179_MYCPN HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 77 6e-13
sp|Q9ZCM4|Y700_RICPR HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 77 6e-13
pir||T18940 multidrug resistance protein homolog - Caenorhabditi... 77 6e-13
pir||T23476 hypothetical protein K08E7.9 - Caenorhabditis elegan... 77 6e-13
sp|Q00449|MDR4_DROME MULTIDRUG RESISTANCE PROTEIN HOMOLOG 49 (P-... 76 9e-13
sp|P31134|POTG_ECOLI PUTRESCINE TRANSPORT ATP-BINDING PROTEIN PO... 76 9e-13
pir||S75960 nitrate transport protein D-1 - Synechocystis sp. (s... 76 9e-13
sp|Q47538|TAUB_ECOLI TAURINE TRANSPORT ATP-BINDING PROTEIN TAUB ... 76 9e-13
emb|CAB56736.1| (AL121600) ABC transport protein, ATP-binding su... 76 9e-13
gb|AAF58437.1| (AE003820) Mdr49 gene product [Drosophila melanog... 76 9e-13
pir||H82377 ABC transporter, ATP-binding protein VCA1101 [import... 76 9e-13
pir||G83607 polyamine transport protein PotG PA0302 [imported] -... 76 9e-13
dbj|BAB04534.1| (AP001509) ABC transporter (ATP-binding protein)... 76 9e-13
sp|P45022|YA78_HAEIN PROBABLE AMINO-ACID ABC TRANSPORTER ATP-BIN... 76 1e-12
pir||E69742 ABC transporter (ATP-binding protein) homolog ybaE -... 76 1e-12
pir||S77459 ABC-type transport protein slr1149 - Synechocystis s... 76 1e-12
gb|AAB58722.2| (AF001155) TAP2 [Mesocricetus auratus] 76 1e-12
gb|AAB58724.2| (AF001157) TAP2 [Mesocricetus auratus] 76 1e-12
dbj|BAB04930.1| (AP001511) ABC transporter (ATP-binding protein)... 76 1e-12
gb|AAG25076.1|AF273216_1 (AF273216) ABC transporter RzcB [Rhizob... 76 1e-12
gi|6323217 ATP-binding cassette (ABC) transporter family member;... 76 1e-12
dbj|BAA12015.1| (D83582) metalloprotease transporter [Serratia m... 76 1e-12
pir||T42842 bile salt transport protein, ATP-dependent - rat >gi... 76 1e-12
pir||T42228 P-glycoprotein sister - rat >gi|3273484|gb|AAC24753.... 76 1e-12
gi|4502457 ATP-binding cassette, sub-family B (MDR/TAP), member ... 76 1e-12
pir||T31073 multidrug resistance p-glycoprotein - nematode (Haem... 76 1e-12
pir||B72097 dipeptide transporter ATPase - Chlamydophila pneumon... 76 1e-12
gb|AAD28285.1|AF136523_1 (AF136523) bile salt export pump [Homo ... 76 1e-12
emb|CAB88985.1| (AL353864) putative ABC-transport protein. [Stre... 76 1e-12
pir||H82440 ABC transporter, ATP-binding protein VCA0602 [import... 76 1e-12
pir||C83221 transport protein HasD PA3406 [imported] - Pseudomon... 76 1e-12
gi|11430459 ATP-binding cassette, sub-family B (MDR/TAP), member... 76 1e-12
pir||E82879 ABC transporter UU539 [imported] - Ureaplasma urealy... 76 1e-12
gb|AAK42548.1| ABC transporter, ATP binding protein [Sulfolobus ... 75 2e-12
sp|P23174|MDR3_CRIGR MULTIDRUG RESISTANCE PROTEIN 3 (P-GLYCOPROT... 75 2e-12
pir||H70788 probable peptidetransport system ABC-transporter ATP... 75 2e-12
pir||JE0248 ATP-binding cassette half-transporter - rat >gi|2982... 75 2e-12
gb|AAD29692.1|AF135793_1 (AF135793) sister of P-glycoprotein [Fu... 75 2e-12
gb|AAD41366.1|AF151698_3 (AF151698) GlnP/GlnQ homolog [Agrobacte... 75 2e-12
pir||H81391 amino-acid ABC transporter ATP-binding protein Cj046... 75 2e-12
gb|AAG26952.1|AC069471_13 (AC069471) P-glycoprotein, putative [A... 75 2e-12
gb|AAG34709.1|AF320001_2 (AF320001) putative ATP binding protein... 75 3e-12
sp|P36372|TAP2_RAT ANTIGEN PEPTIDE TRANSPORTER 2 (APT2) >gi|1119... 75 3e-12
pir||B71077 probable ABC transporter ATP-binding protein - Pyroc... 75 3e-12
gb|AAF65552.1|AF249879_1 (AF249879) liver bile salt export pump ... 75 3e-12
sp|P77279|YBBL_ECOLI HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 75 3e-12
sp|P38053|SSUB_ECOLI PUTATIVE ALIPHATIC SULFONATES TRANSPORT ATP... 75 3e-12
gb|AAC18099.1| (AF058302) ATPase component of putative ABC trans... 75 3e-12
gb|AAC64256.1| (AF042861) putative OppF [Treponema denticola] 75 3e-12
emb|CAB69727.1| (AL137166) putative metal transport ABC transpor... 75 3e-12
gb|AAA93553.1| (L23922) P-glycoprotein 5 [Entamoeba histolytica] 74 4e-12
pir||A49933 proteinase SM transporter PrtD - Serratia marcescens... 74 4e-12
pir||T48672 ABC-type transport system ATP-binding protein hasD [... 74 4e-12
pir||E75120 hypothetical protein PAB1855 - Pyrococcus abyssi (st... 74 4e-12
emb|CAB76006.1| (AL157916) putative ABC transporter, ATP-binding... 74 4e-12
pir||S25577 mt2 protein - rat 74 6e-12
gb|AAA50516.1| (M77784) transport protein [Agrobacterium tumefac... 74 6e-12
pir||S38400 mt2 protein - rat >gi|407477|emb|CAA53053.1| (X75305... 74 6e-12
emb|CAA67415.1| (X98917) orf4 [Methanopyrus kandleri] 74 6e-12
pir||T04251 P-glycoprotein 2 - Arabidopsis thaliana >gi|2108252|... 74 6e-12
pir||T31072 heterocyst differentiation protein HetC - Anabaena s... 74 6e-12
pir||A75083 ATP-binding transport protein PAB1668 - Pyrococcus a... 74 6e-12
pir||D81435 probable iron-uptake ABC transport system ATP-bindin... 74 6e-12
pir||G81168 amino acid ABC transporter, ATP-binding protein NMB0... 74 6e-12
gb|AAF71763.1|AF263912_2 (AF263912) NysG [Streptomyces noursei] 74 6e-12
gb|AAD43626.1|AF071411_1 (AF071411) multidrug resistance protein... 73 7e-12
pir||T46950 probable ATPase component of 2-aminoethylphosphonate... 73 7e-12
pir||T45311 cell division atp-binding protein [imported] - Mycob... 73 7e-12
pir||D69627 cell-division ATP-binding protein ftsE - Bacillus su... 73 7e-12
gb|AAB88659.1| (U62935) multidrug resistance protein 2 [Aspergil... 73 7e-12
pir||T40790 probable permease - fission yeast (Schizosaccharomyc... 73 7e-12
emb|CAB59828.1| (AJ012388) hypothetical protein [Lactococcus lac... 73 7e-12
gb|AAF51223.1| (AE003582) CG9892 gene product [Drosophila melano... 73 7e-12
dbj|BAB05182.1| (AP001512) ABC transporter (ATP-binding protein)... 73 7e-12
dbj|BAB07321.1| (AP001519) cell-division ATP-binding protein [Ba... 73 7e-12
gi|10955056 occP [Agrobacterium tumefaciens] >gi|464298|sp|P3511... 73 1e-11
pir||T30293 ABC transport protein homolog - Salmonella typhi >gi... 73 1e-11
sp|P75831|YBJZ_ECOLI HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 73 1e-11
gi|11038656 ATP-binding cassette, sub-family B, member 11; bile ... 73 1e-11
pir||E81105 ABC transporter, ATP-binding protein NMB1240 [import... 73 1e-11
pir||B81910 probable ABC-transporter ATP-binding protein NMA1409... 73 1e-11
gb|AAF69534.1|AC008007_9 (AC008007) F12M16.17 [Arabidopsis thali... 73 1e-11
prf||1901178A cystic fibrosis transmembrane conductance regulato... 73 1e-11
pir||I76773 ATP binding component of ABC-transporter - Escherich... 73 1e-11
dbj|BAA28332.1| (AB010293) ATP binding component of ABC-transpor... 73 1e-11
emb|CAC05880.1| (AL391754) putative ABC transporter ATP-binding ... 73 1e-11
gb|AAG26946.1|AC069471_7 (AC069471) P-glycoprotein, putative [Ar... 73 1e-11
pir||S30327 multidrug resistance protein 1 - Entamoeba histolyti... 72 2e-11
gb|AAA96713.1| (L42939) major histocompatibility complex class I... 72 2e-11
gi|11498626 ABC transporter, ATP-binding protein [Archaeoglobus ... 72 2e-11
gi|11498589 ABC transporter, ATP-binding protein [Archaeoglobus ... 72 2e-11
pir||T30882 multidrug resistance protein 1 - Aspergillus flavus ... 72 2e-11
pir||T35147 glutamate uptake system ATP-binding protein - Strept... 72 2e-11
pir||G72406 hypothetical protein TM0191 - Thermotoga maritima (s... 72 2e-11
gb|AAF47525.1| (AE003472) CG7955 gene product [alt 3] [Drosophil... 72 2e-11
dbj|BAB04000.1| (AP001508) ABC transporter (ATP-binding protein)... 72 2e-11
pir||D69858 ABC transporter (ATP-binding protein) homolog yknY -... 72 2e-11
pir||S45043 expZ protein - Bacillus subtilis (fragment) >gi|4949... 72 2e-11
pir||T28812 hypothetical protein C54D1.1 - Caenorhabditis elegan... 72 2e-11
sp|P39115|EXPZ_BACSU NUCLEOTIDE BINDING PROTEIN EXPZ >gi|7445764... 72 2e-11
gb|AAD15830.1| (AF062387) TAP2 protein [Xenopus laevis] 72 2e-11
gb|AAD49436.1|AF083642_1 (AF083642) P-glycoprotein [Onchocerca v... 72 2e-11
pir||G75548 ABC transporter, ATP-binding protein - Deinococcus r... 72 2e-11
gb|AAF48177.1| (AE003489) CG1824 gene product [Drosophila melano... 72 2e-11
sp|P36637|SAPF_ECOLI PEPTIDE TRANSPORT SYSTEM ATP-BINDING PROTEI... 71 3e-11
sp|Q60350|Y035_METJA HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 71 3e-11
pir||H71302 probable ABC transporter, ATP-binding protein - syph... 71 3e-11
gi|10956101 ABC transporter subunit PenL [Pediococcus pentosaceu... 71 3e-11
gb|AAF55241.1| (AE003710) CG4225 gene product [Drosophila melano... 71 3e-11
pir||E81936 probable amino acid permease ATP-binding protein NMA... 71 3e-11
dbj|BAB05744.1| (AP001514) ABC transporter (ATP-binding protein)... 71 3e-11
sp|Q00748|MDR5_DROME MULTIDRUG RESISTANCE PROTEIN HOMOLOG 65 (P-... 71 4e-11
sp|P36371|TAP2_MOUSE ANTIGEN PEPTIDE TRANSPORTER 2 (APT2) (HISTO... 71 4e-11
pir||T30855 multidrug resistance protein 2 - fluke (Schistosoma ... 71 4e-11
sp|Q61102|ABC7_MOUSE ATP-BINDING CASSETTE, SUB-FAMILY B, MEMBER ... 71 4e-11
gb|AAB41968.1| (U60091) TAP2 [Mus musculus castaneus] 71 4e-11
gb|AAB41969.1| (U60092) TAP2 [Mus musculus castaneus] 71 4e-11
gb|AAB41970.1| (U60087) TAP2 [Mus musculus] 71 4e-11
gb|AAB41971.1| (U60088) TAP2 [Mus musculus] 71 4e-11
gb|AAB41972.1| (U60089) TAP2 [Mus musculus] 71 4e-11
gi|7549791 ATP-binding cassette, sub-family B, member 3; ATP dep... 71 4e-11
sp|P54718|YFIB_BACSU HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 71 4e-11
pir||E69771 ABC transporter (ATP-binding protein) homolog ydbJ -... 71 4e-11
gb|AAF50669.1| (AE003563) Mdr65 gene product [Drosophila melanog... 71 4e-11
gb|AAG32538.1| (AY005472) SalT [Streptococcus salivarius] 71 4e-11
emb|CAA08835.1| (AJ009799) ABC transporter protein [Gallus gallus] 71 5e-11
emb|CAB37661.1| (AJ224479) cdd4-like protein [Bacillus sphaericus] 71 5e-11
dbj|BAA96370.1| (AB035331) ABC protein [Physarum polycephalum] 71 5e-11
pir||DVHY1C multidrug resistance protein 1 - Chinese hamster >gi... 70 6e-11
sp|P21448|MDR1_CRIGR MULTIDRUG RESISTANCE PROTEIN 1 (P-GLYCOPROT... 70 6e-11
gb|AAA37005.1| (M59254) p-glycoprotein [Cricetulus sp.] 70 6e-11
sp|P75790|YBIT_ECOLI HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 70 6e-11
gi|11497838 branched-chain amino acid ABC transporter, ATP-bindi... 70 6e-11
pir||B71676 probable ABC transporter msbA2 - Rickettsia prowazek... 70 6e-11
pir||T21266 hypothetical protein F22E10.1 - Caenorhabditis elega... 70 6e-11
pir||E75302 ABC transporter, ATP-binding protein - Deinococcus r... 70 6e-11
emb|CAA57938.1| (X82612) ATM1 [Saccharomyces cerevisiae] 70 8e-11
gi|6323959 mitochondrial ABC transporter protein; Atm1p [Sacchar... 70 8e-11
gb|AAB63643.1| (AC001645) ABC transporter (PDR5-like) isolog [Ar... 70 8e-11
gb|AAC98048.1| (AC005896) putative ABC transporter [Arabidopsis ... 70 8e-11
pir||G72598 probable ABC transporter ATP-binding protein APE1255... 70 8e-11
gb|AAD47141.1|AF078777_1 (AF078777) ABC transporter [Homo sapiens] 70 8e-11
pir||D83419 probable ATP-binding component of ABC transporter PA... 70 8e-11
>pir||F75107 abc transporter, ATP-binding protein PAB1929 - Pyrococcus abyssi
(strain Orsay) >gi|5458086|emb|CAB49575.1| (AJ248285)
ABC TRANSPORTER, ATP-BINDING PROTEIN [Pyrococcus abyssi]
Length = 633
Score = 1281 bits (3278), Expect = 0.0
Identities = 633/633 (100%), Positives = 633/633 (100%)
Query: 1 MIIRGKVRESKIPKFKHRWFGVLEVESSEGEVYRLYMSGVAQWFIEGDEVEIKVINEPKE 60
MIIRGKVRESKIPKFKHRWFGVLEVESSEGEVYRLYMSGVAQWFIEGDEVEIKVINEPKE
Sbjct: 1 MIIRGKVRESKIPKFKHRWFGVLEVESSEGEVYRLYMSGVAQWFIEGDEVEIKVINEPKE 60
Query: 61 KDGVKVLEFNDYELYKFYNGEKIKVWPLWEKIYKAKRYSPLTGDVLYEYEIRAREATYES 120
KDGVKVLEFNDYELYKFYNGEKIKVWPLWEKIYKAKRYSPLTGDVLYEYEIRAREATYES
Sbjct: 61 KDGVKVLEFNDYELYKFYNGEKIKVWPLWEKIYKAKRYSPLTGDVLYEYEIRAREATYES 120
Query: 121 DFEFIAELEQYHYASQKEKVALWRCEKCGTIIEANTKPICPKCKTDKHVHILEIKGSTPA 180
DFEFIAELEQYHYASQKEKVALWRCEKCGTIIEANTKPICPKCKTDKHVHILEIKGSTPA
Sbjct: 121 DFEFIAELEQYHYASQKEKVALWRCEKCGTIIEANTKPICPKCKTDKHVHILEIKGSTPA 180
Query: 181 SRFLILELVKREEYEPRILAYVRIDPPIPLMHRKLPNGEIERNIREKVFPEDWLKPSFWP 240
SRFLILELVKREEYEPRILAYVRIDPPIPLMHRKLPNGEIERNIREKVFPEDWLKPSFWP
Sbjct: 181 SRFLILELVKREEYEPRILAYVRIDPPIPLMHRKLPNGEIERNIREKVFPEDWLKPSFWP 240
Query: 241 EKIMHELFMELRKKYSKKVARSLLWEKAKEKALRESNTAGARIARVVVHPDYRSDGLGQL 300
EKIMHELFMELRKKYSKKVARSLLWEKAKEKALRESNTAGARIARVVVHPDYRSDGLGQL
Sbjct: 241 EKIMHELFMELRKKYSKKVARSLLWEKAKEKALRESNTAGARIARVVVHPDYRSDGLGQL 300
Query: 301 SVKAALEWVSERRIPEMRKKKHFVETIAQMARYNPFFEKVGFKFVWETASGRPVLIYPLT 360
SVKAALEWVSERRIPEMRKKKHFVETIAQMARYNPFFEKVGFKFVWETASGRPVLIYPLT
Sbjct: 301 SVKAALEWVSERRIPEMRKKKHFVETIAQMARYNPFFEKVGFKFVWETASGRPVLIYPLT 360
Query: 361 QEAKEYLERYFKEDPYAPKEPLWKPSYGKVEMLEGPIVFKNVTKVFESELDIKGLPQEIQ 420
QEAKEYLERYFKEDPYAPKEPLWKPSYGKVEMLEGPIVFKNVTKVFESELDIKGLPQEIQ
Sbjct: 361 QEAKEYLERYFKEDPYAPKEPLWKPSYGKVEMLEGPIVFKNVTKVFESELDIKGLPQEIQ 420
Query: 421 DLLKAFGVRHRVIQRPVLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGYWEEKY 480
DLLKAFGVRHRVIQRPVLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGYWEEKY
Sbjct: 421 DLLKAFGVRHRVIQRPVLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGYWEEKY 480
Query: 481 RPTSGKIEVPKNAKVSVLIPGEIEPEFGSETILEHVYRKIRDLNAAVEVLNRAGLSDAVL 540
RPTSGKIEVPKNAKVSVLIPGEIEPEFGSETILEHVYRKIRDLNAAVEVLNRAGLSDAVL
Sbjct: 481 RPTSGKIEVPKNAKVSVLIPGEIEPEFGSETILEHVYRKIRDLNAAVEVLNRAGLSDAVL 540
Query: 541 YRAKFSELSTGQKERAKIASLLAERPNVLLIDEFAAHLDTLTAMRVARKVSEIVREAGIT 600
YRAKFSELSTGQKERAKIASLLAERPNVLLIDEFAAHLDTLTAMRVARKVSEIVREAGIT
Sbjct: 541 YRAKFSELSTGQKERAKIASLLAERPNVLLIDEFAAHLDTLTAMRVARKVSEIVREAGIT 600
Query: 601 AVIITHRPEVVKALDPDKVLFVGYGTVIVRKSL 633
AVIITHRPEVVKALDPDKVLFVGYGTVIVRKSL
Sbjct: 601 AVIITHRPEVVKALDPDKVLFVGYGTVIVRKSL 633
>pir||G71026 hypothetical protein PH1507 - Pyrococcus horikoshii
>gi|3257932|dbj|BAA30615.1| (AP000006) 633aa long
hypothetical protein [Pyrococcus horikoshii]
Length = 633
Score = 1244 bits (3183), Expect = 0.0
Identities = 600/633 (94%), Positives = 627/633 (98%)
Query: 1 MIIRGKVRESKIPKFKHRWFGVLEVESSEGEVYRLYMSGVAQWFIEGDEVEIKVINEPKE 60
MII+GKV+ESKIPKFKHRWFGVLEVE+SEGEVYRLYMSGVAQWFIEGDEVEI+VINEPKE
Sbjct: 1 MIIKGKVKESKIPKFKHRWFGVLEVETSEGEVYRLYMSGVAQWFIEGDEVEIRVINEPKE 60
Query: 61 KDGVKVLEFNDYELYKFYNGEKIKVWPLWEKIYKAKRYSPLTGDVLYEYEIRAREATYES 120
KDGVK+LEFNDYELYKFYNGEKIKVWPLWEKIY+AKRYSPLTG+VLYEYEIRAREATYES
Sbjct: 61 KDGVKILEFNDYELYKFYNGEKIKVWPLWEKIYRAKRYSPLTGEVLYEYEIRAREATYES 120
Query: 121 DFEFIAELEQYHYASQKEKVALWRCEKCGTIIEANTKPICPKCKTDKHVHILEIKGSTPA 180
DFEFIAELEQYHYASQKEKVALWRCEKCGTIIEANTKPICPKCKTDKHVHILEIKGSTPA
Sbjct: 121 DFEFIAELEQYHYASQKEKVALWRCEKCGTIIEANTKPICPKCKTDKHVHILEIKGSTPA 180
Query: 181 SRFLILELVKREEYEPRILAYVRIDPPIPLMHRKLPNGEIERNIREKVFPEDWLKPSFWP 240
SRFLILELVKREEYEPRILAYVR+DPPIPLMHRKLPNGE+ERNIREKVFPEDWLKPSFWP
Sbjct: 181 SRFLILELVKREEYEPRILAYVRVDPPIPLMHRKLPNGEVERNIREKVFPEDWLKPSFWP 240
Query: 241 EKIMHELFMELRKKYSKKVARSLLWEKAKEKALRESNTAGARIARVVVHPDYRSDGLGQL 300
EKIMHELFMELRKKY KK+ARSLLWE+AKE+ALRESNTAGARIARVVVHPDYRSDG+GQL
Sbjct: 241 EKIMHELFMELRKKYPKKIARSLLWEEAKERALRESNTAGARIARVVVHPDYRSDGIGQL 300
Query: 301 SVKAALEWVSERRIPEMRKKKHFVETIAQMARYNPFFEKVGFKFVWETASGRPVLIYPLT 360
SVKAALEW++ERRIPEMRK+KHFVETIAQMARYNPFFEKVGFKFVWETASGRPVL+YPLT
Sbjct: 301 SVKAALEWIAERRIPEMRKRKHFVETIAQMARYNPFFEKVGFKFVWETASGRPVLMYPLT 360
Query: 361 QEAKEYLERYFKEDPYAPKEPLWKPSYGKVEMLEGPIVFKNVTKVFESELDIKGLPQEIQ 420
QEAKEYL+RYF+EDPYAPKEPLWKPSYGKVE LEGPIVFKNVTKVFESELDIKGLP+EIQ
Sbjct: 361 QEAKEYLDRYFREDPYAPKEPLWKPSYGKVEKLEGPIVFKNVTKVFESELDIKGLPEEIQ 420
Query: 421 DLLKAFGVRHRVIQRPVLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGYWEEKY 480
DLLKAFGVRHRVIQRPVLRNLNF INPGE+VAVVGASGAGKTTLLRLILGAI+GYWEEKY
Sbjct: 421 DLLKAFGVRHRVIQRPVLRNLNFQINPGEIVAVVGASGAGKTTLLRLILGAIRGYWEEKY 480
Query: 481 RPTSGKIEVPKNAKVSVLIPGEIEPEFGSETILEHVYRKIRDLNAAVEVLNRAGLSDAVL 540
RPTSGKIEVPKNAKVS LIPGE+EPEFGSETILEHVYRK+RDLNAAVE+LNR+GLSDAVL
Sbjct: 481 RPTSGKIEVPKNAKVSALIPGEMEPEFGSETILEHVYRKVRDLNAAVEILNRSGLSDAVL 540
Query: 541 YRAKFSELSTGQKERAKIASLLAERPNVLLIDEFAAHLDTLTAMRVARKVSEIVREAGIT 600
YRAKFSELSTGQKERAKIASLLAERPNVLLIDEFAAHLDTLTAMRVARKVSEI REAGIT
Sbjct: 541 YRAKFSELSTGQKERAKIASLLAERPNVLLIDEFAAHLDTLTAMRVARKVSEIAREAGIT 600
Query: 601 AVIITHRPEVVKALDPDKVLFVGYGTVIVRKSL 633
A+IITHRPEVVKALDPDKVLFVGYGTVIVR SL
Sbjct: 601 AIIITHRPEVVKALDPDKVLFVGYGTVIVRDSL 633
>gi|11498669 ABC transporter, ATP-binding protein, putative [Archaeoglobus
fulgidus] >gi|7445782|pir||H69382 ABC transporter,
ATP-binding protein homolog - Archaeoglobus fulgidus
>gi|2649523|gb|AAB90175.1| (AE001029) ABC transporter,
ATP-binding protein, putative [Archaeoglobus fulgidus]
Length = 620
Score = 725 bits (1852), Expect = 0.0
Identities = 355/624 (56%), Positives = 482/624 (76%), Gaps = 13/624 (2%)
Query: 6 KVRESKIPKFKHRWFGVLEVESSEGEVYRLYMSGVAQWFIEGDEVEIKVINEPKEKDGVK 65
KV ++PK +HRWFG +E+++ LYMSG+A W EGD VE+ + NEPKE G K
Sbjct: 4 KVVSHELPKHRHRWFGAVELDNG----LTLYMSGIAAWLFEGDVVEVVIKNEPKEIYGRK 59
Query: 66 VLEFNDYELYKFYNGEKIKVWPLWEKIYKAKRYSPLTGDVLYEYEIRAREATYESDFEFI 125
+L F DYELYKFY E+IKVW ++ + + RYS G +Y Y IRAREA YE DFE I
Sbjct: 60 ILFFADYELYKFYGSERIKVWDVFSRNLELPRYS--FGKEVYRYRIRAREAVYEKDFERI 117
Query: 126 AELEQYHYASQKEKVALWRCEKCGTIIEANTKPICPKCKTDKHVHILEIKGSTPASRFLI 185
AELEQYHYASQK KVALW+C CG +IEANTKP+C +C + ++VHI+EIKGSTPASRFLI
Sbjct: 118 AELEQYHYASQKSKVALWKCYDCGNLIEANTKPVC-ECGS-RNVHIVEIKGSTPASRFLI 175
Query: 186 LELVKREEYEPRILAYVRIDPPIPLMHRKLPNGEIERNIREKVFPEDWLKPSFWPEKIMH 245
ELV+R+ +EP ++AYVR+DPP+PLMHRKL +G+I NIRE+VFP++W + F PEK +
Sbjct: 176 FELVERQPFEPEVVAYVRVDPPVPLMHRKL-DGKIVENIRERVFPKEWFENVFSPEKELS 234
Query: 246 ELFMELRKKYSKKVARSLLWEKAKEKALRESNTAGARIARVVVHPDYRSDGLGQLSVKAA 305
ELF +LR ++S KVAR LWE+A E+A+++ N+A +RIARVVVHPDYR+DGLG L+V+ A
Sbjct: 235 ELFRKLRSRFSLKVARHRLWEEASEEAMKKCNSAASRIARVVVHPDYRADGLGILAVRTA 294
Query: 306 LEWVSERRIPEMRKKKHFVETIAQMARYNPFFEKVGFKFVWETASGRPVLIYPLTQEAKE 365
+EW+ ERR+PEMR +KH VETIAQMAR+NPFFEK GF ++W+TASG+PVL PL++EA+
Sbjct: 295 VEWIEERRVPEMRMRKHLVETIAQMARFNPFFEKAGFYYLWDTASGKPVLYKPLSEEAER 354
Query: 366 YLERYFKEDPYAPKE--PLWKPSYGKVEMLEGPIVFKNVTKVFESELDIKGLPQEIQDLL 423
Y+ ++ +ED A L YG V+ LE + F+NV+K+F S LD++ + E++ +L
Sbjct: 355 YIRKFLEEDEVARGHGGKLCVSRYGSVKPLE-KLKFRNVSKLFASTLDLEKVSDEVRTVL 413
Query: 424 KAFGVRHRVIQRPVLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGYWEEKYRPT 483
++FGVR RV++R VLR++N I PGE+VAVVGASG+GKTT LRLI+G ++ Y+P+
Sbjct: 414 ESFGVRQRVVERYVLRDVNLEIKPGEIVAVVGASGSGKTTFLRLIVGEALKLDDDVYKPS 473
Query: 484 SGKIEVPKNAKVSVLIPGEIEPEFGSETILEHVYRKIRDLNAAVEVLNRAGLSDAVLYRA 543
SG +EV ++ ++ +IP E+EP+ ++ILE ++ D++ AVEVLNRAG+SDAVLYRA
Sbjct: 474 SGMVEVVVDS-IAAMIPSELEPQITEKSILEQIFDITGDIHLAVEVLNRAGISDAVLYRA 532
Query: 544 KFSELSTGQKERAKIASLLAERPNVLLIDEFAAHLDTLTAMRVARKVSEIVREAGITAVI 603
+F+ELSTGQKER K+A+ LA++P+++L+DEFAAHLD +TA+RVARK+SE+ REA IT +
Sbjct: 533 RFNELSTGQKERFKLAACLAKKPSLMLVDEFAAHLDEMTAVRVARKISELAREAKITLIA 592
Query: 604 ITHRPEVVKALDPDKVLFVGYGTV 627
+THR EV+ AL PD++L+VGYG V
Sbjct: 593 VTHRKEVINALSPDRILYVGYGGV 616
>pir||D72453 hypothetical protein APE2272 - Aeropyrum pernix (strain K1)
>gi|5105973|dbj|BAA81284.1| (AP000064) 660aa long
hypothetical protein [Aeropyrum pernix]
Length = 660
Score = 686 bits (1752), Expect = 0.0
Identities = 337/635 (53%), Positives = 450/635 (70%), Gaps = 15/635 (2%)
Query: 4 RGKVRESKIPKFKHRWFGVLEVESSEGEVYRLYMSGVAQWFIEGDEVEIKVINEPKEKDG 63
+ KV +IP+ RW G L VE G ++ G+A+WF G+ VE+++ EP++ DG
Sbjct: 16 KAKVIGQRIPRVGWRWLGGLTVEHEGGRLHLFMTGGIARWFSPGETVELELHEEPEDIDG 75
Query: 64 VKVLEFNDYELYKFYNGEKIKVWPLWEKIYKAKRYSPLTGDVLYEYEIRAREATYESDFE 123
V V Y L++ Y GE++ VWP+W K+ R + +TG +Y Y + AREA E D++
Sbjct: 76 VMVAPRESYRLWRIYRGERVLVWPVWRKVVSIDRET-ITGRRVYSYRLLAREAQTEEDYK 134
Query: 124 FIAELEQYHYASQKEKVALWRCEKCGTIIEANTKPICPKCKTDKHVHILEIKGSTPASRF 183
I LEQYHYAS++E VA+WRC CG +E+N +P CP+ + + EI+GS P+SRF
Sbjct: 135 EIVGLEQYHYASKEEIVAIWRCPVCGVYLESNLQPECPRDGVP--MKLQEIRGSLPSSRF 192
Query: 184 LILELVKREEYEPRILAYVRIDPPIPLMHRKLPNGE----IERNIREKVFPEDWLKPSFW 239
+++EL+ R+ YEPRI+ YVR+D PIPLMHR++P +E+ IREKVFP+ W P+FW
Sbjct: 193 MVVELLDRKPYEPRIVGYVRVDTPIPLMHRRVPKPGGGFGVEKMIREKVFPKYWFHPTFW 252
Query: 240 P-----EKIMHELFMELRKKY-SKKVARSLLWEKAKEKALRESNTAGARIARVVVHPDYR 293
P + + F EL K Y S+++AR+ + E+ ++ALR +NTA ARIARVVVHPDYR
Sbjct: 253 PVEPRNRRSLLARFRELAKLYGSRRIARAAVGEEIADEALRRANTAAARIARVVVHPDYR 312
Query: 294 SDGLGQLSVKAALEWVSERRIPEMRKKKHFVETIAQMARYNPFFEKVGFKFVWETASGRP 353
DGLG SV ALEW+ ERRIPEMR+ KH VETIAQMARYNPFFE+ GFK++W+TASGRP
Sbjct: 313 GDGLGVASVSLALEWIRERRIPEMRRAKHVVETIAQMARYNPFFERAGFKYMWDTASGRP 372
Query: 354 VLIYPLTQEAKEYLERYFKEDPYAPKEP--LWKPSYGKVEMLEGPIVFKNVTKVFESELD 411
VL++PLT+EA+ +E++ DP A L++P Y VEML P VTK + S LD
Sbjct: 373 VLMHPLTEEARRIIEKFLSSDPVAKSHGGVLYRPRYSPVEMLSEPESLVGVTKSYRSVLD 432
Query: 412 IKGLPQEIQDLLKAFGVRHRVIQRPVLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGA 471
I+ LP+E+QD+L+AFG RV++R VL+++N T+NPG V AVVGASGAGKTTLLR+ILG
Sbjct: 433 IERLPRELQDVLRAFGAERRVVERYVLKDVNITVNPGSVAAVVGASGAGKTTLLRMILGK 492
Query: 472 IKGYWEEKYRPTSGKIEVPKNAKVSVLIPGEIEPEFGSETILEHVYRKIRDLNAAVEVLN 531
G E YRP SG +++P N K + L+PGE+EP FG ET+LEHV K+ D AAVEVL+
Sbjct: 493 ALGIGGEGYRPDSGVVKIPTNTKAAALLPGELEPSFGGETLLEHVASKLGDPGAAVEVLS 552
Query: 532 RAGLSDAVLYRAKFSELSTGQKERAKIASLLAERPNVLLIDEFAAHLDTLTAMRVARKVS 591
GL DA+ +RA F ELSTGQKERAK+ASLLAERPN+L+IDEF AHLD LTA R+ARK+
Sbjct: 553 SVGLGDAIFFRASFGELSTGQKERAKLASLLAERPNLLVIDEFMAHLDPLTARRIARKLG 612
Query: 592 EIVREAGITAVIITHRPEVVKALDPDKVLFVGYGT 626
++ R GIT ++ T+RPE++ AL PD V+ VGYG+
Sbjct: 613 KLARSKGITLIVSTNRPEILDALQPDTVILVGYGS 647
>sp|O34900|YTMN_BACSU PROBABLE AMINO-ACID ABC TRANSPORTER ATP-BINDING PROTEIN YTMN
>gi|7442519|pir||F69641 histidine transport protein hisP
- Bacillus subtilis >gi|2293251|gb|AAC00329.1|
(AF008220) putative amino acid transporter [Bacillus
subtilis] >gi|2635399|emb|CAB14894.1| (Z99118) histidine
transport protein (ATP-binding protein) [Bacillus
subtilis] >gi|2635418|emb|CAB14912.1| (Z99119) histidine
transport protein (ATP-binding protein) [Bacillus
subtilis]
Length = 259
Score = 93.2 bits (228), Expect = 8e-18
Identities = 76/235 (32%), Positives = 115/235 (48%), Gaps = 43/235 (18%)
Query: 418 EIQDLLKAFGVRHRVIQRPVLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGYWE 477
EI+++ K FG+ H VL+ +N T+ GEVV ++G SG+GKTT LR +
Sbjct: 3 EIKNIHKQFGIHH------VLKGINLTVRKGEVVTIIGPSGSGKTTFLRCL--------N 48
Query: 478 EKYRPTSGKIEVPKNAKVSVLIPGEIEPE---------------FGSETILEHVY----- 517
RP G I + + ++ P + E F +T++E+V
Sbjct: 49 LLERPDEGIISI-HDKVINCRFPSKKEVHWLRKQTAMVFQQYHLFAHKTVIENVMEGLTI 107
Query: 518 -RKIRDLNA---AVEVLNRAGLSDAVLYRAKFSELSTGQKERAKIASLLAERPNVLLIDE 573
RK+R +A A L + GL D + A S+LS GQK+R IA LA P+VLL DE
Sbjct: 108 ARKMRKQDAYAVAENELRKVGLQDKL--NAYPSQLSGGQKQRVGIARALAIHPDVLLFDE 165
Query: 574 FAAHLDTLTAMRVARKVSEIVREAGITAVIITHRPEVVKALDPDKVLFVGYGTVI 628
A LD V + EIV+ G T +++TH E + + D+V+F+ G ++
Sbjct: 166 PTAALDPELVGEVLEVMLEIVK-TGATMIVVTHEMEFARRVS-DQVVFMDEGVIV 218
>emb|CAA11724.1| (AJ223978) putative ABC transporter, YvrO [Bacillus subtilis]
Length = 229
Score = 88.2 bits (215), Expect = 3e-16
Identities = 70/218 (32%), Positives = 112/218 (51%), Gaps = 40/218 (18%)
Query: 436 PVLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGYWEEKYRPTSG-----KIEVP 490
P+L+++N T+ GE +A++G SG+GK+TL+ +I G + RPTSG +I++
Sbjct: 19 PILKHINLTVQAGEFLAIMGPSGSGKSTLMNII-GCLD-------RPTSGTYTLDQIDIL 70
Query: 491 KNAKVSVLIPGEIEPE---FGSETI-------------LEHVYRKIRDLNA---AVEVLN 531
K ++ EI E F +T L +Y K++ A E L
Sbjct: 71 KGKDGAL---AEIRNESIGFVFQTFHLLPRLTALQNVELPMIYNKVKKKERRQRAYEALE 127
Query: 532 RAGLSDAVLYRAKFSELSTGQKERAKIASLLAERPNVLLIDEFAAHLDTLTAMRVARKVS 591
+ GL D V Y+ +LS GQK+R IA L +P +L DE LDT ++ ++ S
Sbjct: 128 KVGLKDRVSYKPP--KLSGGQKQRVAIARALVNQPRFILADEPTGALDTKSSEQILALFS 185
Query: 592 EIVREAGITAVIITHRPEVVKALDPDKVLFVGYGTVIV 629
E+ RE G T ++ITH P+V K D+ +F+ G +++
Sbjct: 186 ELHRE-GKTIIMITHDPDVAK--KADRTVFIRDGELVL 220
>pir||C82957 probable ATP-binding component of ABC transporter PA5503 [imported]
- Pseudomonas aeruginosa (strain PAO1)
>gi|9951839|gb|AAG08888.1|AE004963_1 (AE004963) probable
ATP-binding component of ABC transporter [Pseudomonas
aeruginosa]
Length = 335
Score = 87.4 bits (213), Expect = 4e-16
Identities = 77/233 (33%), Positives = 118/233 (50%), Gaps = 36/233 (15%)
Query: 418 EIQDLLKAFGVRHRVIQRPVLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGYWE 477
E D+ K + V R I P L+ I G++ ++G SGAGK+TLLRLI
Sbjct: 3 EFHDVHKTYRVAGREI--PALQPTRLNIQAGQIFGLIGHSGAGKSTLLRLI--------N 52
Query: 478 EKYRPTSGKIEVPKNAKVSVLIP----------GEIEPEFG---SETILEHVYRKIR--- 521
P+ G+I V + V+ L G I F S+T+ +++ +R
Sbjct: 53 RLEEPSGGRILV-EGEDVTALDAEGLRRFRQRVGMIFQHFNLLSSKTVADNIAMPLRLAG 111
Query: 522 -----DLNAAV-EVLNRAGLSDAVLYRAKFSELSTGQKERAKIASLLAERPNVLLIDEFA 575
+++A V E+L R GLSD R ++LS GQK+R IA LA RP++LL DE
Sbjct: 112 GFSRAEVDARVSELLARVGLSDHA--RKYPAQLSGGQKQRVGIARALACRPSILLCDEAT 169
Query: 576 AHLDTLTAMRVARKVSEIVREAGITAVIITHRPEVVKALDPDKVLFVGYGTVI 628
+ LD T V + ++EI RE +T V+ITH +V++ + D+V + G ++
Sbjct: 170 SALDPQTTASVLQLLAEINRELKLTIVLITHEMDVIRRV-CDQVAVMDGGAIV 221
>dbj|BAA76299.1| (AB003329) LAMDR1 [Leishmania amazonensis]
Length = 1341
Score = 87.0 bits (212), Expect = 6e-16
Identities = 68/244 (27%), Positives = 121/244 (48%), Gaps = 37/244 (15%)
Query: 398 VFKNVTKVFESELDIKGLPQE-IQDLLKAFGVRHRVIQRP---VLRNLNFTINPGEVVAV 453
+FK + +V ++D G+P + ++ VR RP + R+LN TI G+ VA
Sbjct: 426 IFKTIERVPPVDIDAGGVPVTGFRQSIEFHNVRFSYPTRPDMILFRDLNLTIKRGQKVAF 485
Query: 454 VGASGAGKTTLLRLILGAIKGYWEEKYRPTSGKIEVP---------KNAKVSVLIPGEIE 504
G+SG GK++++ LI + Y P G + + + + I + E
Sbjct: 486 SGSSGCGKSSMIGLI--------QRFYDPVGGAVLCDGVDMRELCLYDWRDQIGIVSQ-E 536
Query: 505 PEFGSETILEHVYRKIRDLNA----AVEVLNRAGLSDAVL---------YRAKFSELSTG 551
P + T++E+V ++ NA +E +A + D ++ A S+LS G
Sbjct: 537 PNLFAGTMMENV--RVGKPNATEEEVIEACRQANVHDTIMSLPDQYNTPVGAVGSQLSGG 594
Query: 552 QKERAKIASLLAERPNVLLIDEFAAHLDTLTAMRVARKVSEIVREAGITAVIITHRPEVV 611
QK+R IA L +RP +LL+DE + LD + M V R + +++++ G+T ++I HR E +
Sbjct: 595 QKQRIAIARALVKRPPILLLDEATSALDRKSEMEVQRSLDQLMQKGGMTVIVIAHRLETI 654
Query: 612 KALD 615
+ +D
Sbjct: 655 RNVD 658
>pir||H82709 colicin V secretion ABC transporter ATP-binding protein XF1220
[imported] - Xylella fastidiosa (strain 9a5c)
>gi|9106194|gb|AAF84030.1|AE003955_11 (AE003955) colicin
V secretion ABC transporter ATP-binding protein [Xylella
fastidiosa]
Length = 707
Score = 86.2 bits (210), Expect = 1e-15
Identities = 71/245 (28%), Positives = 117/245 (46%), Gaps = 44/245 (17%)
Query: 409 ELDIKGLPQEIQDL-LKAFGVRHRVIQRPVLRNLNFTINPGEVVAVVGASGAGKTTLLRL 467
EL LP++ D+ ++ R+ + VL++ +F + GE VA++GASG GKTTL++L
Sbjct: 459 ELPEMQLPKKEPDIEVEGLSFRYGEDEPWVLKDCSFKVAAGESVAIIGASGCGKTTLMKL 518
Query: 468 ILGAIKGYWEEKYRPTSGKIEVP---------KNAKVSV--------LIPGEI------- 503
+LG +K PT+G I + +N + V L G +
Sbjct: 519 LLGLLK--------PTAGTIRISGRDLHKFGTRNVRSIVGAVMQDDQLFAGSVADNISFF 570
Query: 504 EPEFGSETILEHVYRKIRDLNAAVEVLNRAGLSDAVLYRAKFSELSTGQKERAKIASLLA 563
+P+F E I L A E + + L S LS GQK+R +A L
Sbjct: 571 DPDFDLERI-----EAAAKLAAIHEDIAAMPMGYHALIGDMGSALSGGQKQRVILARALY 625
Query: 564 ERPNVLLIDEFAAHLDTLTAMRVARKVSEIVREAGITAVIITHRPEVVKALDPDKVLFVG 623
+P +L +DE +HLD + R V++ V + +T VI+ HRPE + + D+V+ +
Sbjct: 626 RQPKLLFLDEATSHLDVMR----ERLVNDAVHQLKLTKVIVAHRPETIAS--TDRVVILD 679
Query: 624 YGTVI 628
+G ++
Sbjct: 680 HGRIV 684
>emb|CAB61549.1| (AL133171) putative ABC transporter [Streptomyces coelicolor A3(2)]
Length = 740
Score = 84.7 bits (206), Expect = 3e-15
Identities = 68/226 (30%), Positives = 117/226 (51%), Gaps = 25/226 (11%)
Query: 418 EIQDLLKAFGVRHRVIQRPVLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGYWE 477
E+Q++ +FG + + +P+L + T+ PG+ VA+VG SG+GK+T+ RLI G + W+
Sbjct: 507 ELQNV--SFG--YNPLDKPLLSGFDLTVGPGQQVALVGGSGSGKSTVSRLISG-LYASWD 561
Query: 478 EKYRPTSGKI-EVPKNAKVSVLIPGEIEPEFGSETILEHVY---RKIRDLNAAVEVLNRA 533
R ++ ++P+ A S + + + ++ ++V I D +A VE L A
Sbjct: 562 GVIRIDGQRLDDIPRGALASSVSFVDQDVFLFEGSVRDNVALWDPSIPD-DAVVEALKDA 620
Query: 534 GLSDAVLYR---------AKFSELSTGQKERAKIASLLAERPNVLLIDEFAAHLDTLTAM 584
L D V R S GQ++R +IA L RP++L++DE + LD T +
Sbjct: 621 ALYDVVTRRPGGLHSPVEQDGRNFSGGQRQRLEIARALVRRPSILVLDEVTSALDAETEL 680
Query: 585 RVARKVSEIVREAGITAVIITHRPEVVKALDPDKVLFVGYGTVIVR 630
V + +R G V+I HR V+ D D+++ + +GTV+ R
Sbjct: 681 ----VVMDNLRRRGCACVVIAHRLSTVR--DSDEIVVLDHGTVVER 720
>pir||F71800 ABC transporter, ATP-binding protein - Helicobacter pylori (strain
J99) >gi|4156118|gb|AAD07069.1| (AE001570) abc
transporter, ATP-binding protein [Helicobacter pylori
J99]
Length = 327
Score = 84.3 bits (205), Expect = 4e-15
Identities = 68/216 (31%), Positives = 110/216 (50%), Gaps = 31/216 (14%)
Query: 438 LRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGYWEEKYRPTSGKIEV-------- 489
L+ +N + G+++ V+G SGAGK+TL+RLI RP+SG++ V
Sbjct: 19 LKGVNLELKKGDILGVIGYSGAGKSTLIRLI--------NCLERPSSGEVLVNGVNLLNL 70
Query: 490 -PKNAKVSVLIPGEIEPEFG---SETILEHV--------YRKIRDLNAAVEVLNRAGLSD 537
PK + + G I F ++ + E+V + K + + E+L GL D
Sbjct: 71 KPKELQKARQKIGMIFQHFNLLSAKNVFENVAFALEIARWEKTKIKSRVHELLELVGLED 130
Query: 538 AVLYRAKFSELSTGQKERAKIASLLAERPNVLLIDEFAAHLDTLTAMRVARKVSEIVREA 597
V + K +LS GQK+R IA LA PN+LL DE + LD+ T + +S I ++
Sbjct: 131 KVHFYPK--QLSGGQKQRVAIARSLANCPNLLLCDEATSALDSKTTHSILTLLSGIQKKF 188
Query: 598 GITAVIITHRPEVVKALDPDKVLFVGYGTVIVRKSL 633
++ V ITH+ EVVK L +++ + G ++ R S+
Sbjct: 189 DLSIVFITHQIEVVKEL-CNQMCVISSGEIVERGSV 223
>emb|CAB69672.1| (AL137165) probable ABC transporter protein, ATP-binding component.
[Streptomyces coelicolor A3(2)]
Length = 589
Score = 84.3 bits (205), Expect = 4e-15
Identities = 63/213 (29%), Positives = 106/213 (49%), Gaps = 33/213 (15%)
Query: 435 RPVLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGYWEEKYRPTSGKIEVPKN-- 492
RP + + ++ PGE +A+VGASGAGK+T+L L++G + RPTSG++ + +
Sbjct: 365 RPAVSDFTLSVEPGETIALVGASGAGKSTVLNLVIGFL--------RPTSGRLLLDGHDM 416
Query: 493 ---------------AKVSVLIPGEIEPE--FGSETILEHVYR-KIRDLNAAVEVLNRAG 534
+ S+L G I +G + E R +RD N A+E ++R
Sbjct: 417 NTLDLRTYRRFVSVVPQESILFDGTIRENVAYGMDEADEETVRGALRDAN-ALEFVDRLP 475
Query: 535 LSDAVLYRAKFSELSTGQKERAKIASLLAERPNVLLIDEFAAHLDTLTAMRVARKVSEIV 594
L + LS GQ++R IA L P VL++DE + LDT + V + ++ ++
Sbjct: 476 RGLDTLVGEHGARLSGGQRQRLAIARALIRDPRVLVLDEATSALDTRSEALVQQALARLL 535
Query: 595 REAGITAVIITHRPEVVKALDPDKVLFVGYGTV 627
R G T ++ HR V+ D+++ +G G +
Sbjct: 536 R--GRTTFVVAHRLSTVRG--ADRIVVMGEGRI 564
>gb|AAC45666.1| (AF010307) AbcC [Helicobacter pylori]
Length = 327
Score = 83.9 bits (204), Expect = 5e-15
Identities = 68/216 (31%), Positives = 110/216 (50%), Gaps = 31/216 (14%)
Query: 438 LRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGYWEEKYRPTSGKIEV-------- 489
L+ +N + G+++ V+G SGAGK+TL+RLI RP+SG++ V
Sbjct: 19 LKGVNLELKKGDILGVIGYSGAGKSTLIRLI--------NCLERPSSGEVLVNGVNLLKL 70
Query: 490 -PKNAKVSVLIPGEIEPEFG---SETILEHV--------YRKIRDLNAAVEVLNRAGLSD 537
PK + + G I F ++ + E+V + K + + E+L GL D
Sbjct: 71 KPKELQKARQKIGMIFQHFNLLSAKDVFENVAFALEIARWEKTKIKSRVHELLELVGLED 130
Query: 538 AVLYRAKFSELSTGQKERAKIASLLAERPNVLLIDEFAAHLDTLTAMRVARKVSEIVREA 597
V + K +LS GQKER IA LA P++LL DE + LD+ T + +S I ++
Sbjct: 131 KVHFYPK--QLSGGQKERVAIARSLANCPDLLLCDEATSALDSKTTHSILTLLSGIQKKL 188
Query: 598 GITAVIITHRPEVVKALDPDKVLFVGYGTVIVRKSL 633
++ V ITH+ EVVK L +++ + G ++ R S+
Sbjct: 189 DLSVVFITHQIEVVKEL-CNQMCVISSGEIVERGSV 223
>sp|P44785|ABC_HAEIN ATP-BINDING PROTEIN ABC >gi|1073885|pir||C64082 ATP-binding protein
homolog HI0621 - Haemophilus influenzae (strain Rd
KW20) >gi|1573615|gb|AAC22280.1| (U32744) ABC
transporter, ATP-binding protein [Haemophilus influenzae
Rd]
Length = 345
Score = 83.9 bits (204), Expect = 5e-15
Identities = 70/211 (33%), Positives = 103/211 (48%), Gaps = 31/211 (14%)
Query: 438 LRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGYWEEKYRPTSGKI-----EVPKN 492
L N++ I G++ V+GASGAGK+TL+R + +PTSG + E+ K
Sbjct: 21 LDNVSLNIEKGQICGVIGASGAGKSTLIRCV--------NLLEKPTSGSVIVDGVELTKL 72
Query: 493 AKVSVLIP----GEIEPEFG---SETILEHVY--------RKIRDLNAAVEVLNRAGLSD 537
+ +++ G I F S T+ E+V K + +L+ GLS+
Sbjct: 73 SDRELVLARRQIGMIFQHFNLLSSRTVFENVALPLELESESKAKIQEKITALLDLVGLSE 132
Query: 538 AVLYRAKFSELSTGQKERAKIASLLAERPNVLLIDEFAAHLDTLTAMRVARKVSEIVREA 597
A S LS GQK+R IA LA P VLL DE + LD T + + + EI R
Sbjct: 133 K--RDAYPSNLSGGQKQRVAIARALASDPKVLLCDEATSALDPATTQSILKLLKEINRTL 190
Query: 598 GITAVIITHRPEVVKALDPDKVLFVGYGTVI 628
GIT ++ITH EVVK + D+V + G ++
Sbjct: 191 GITILLITHEMEVVKQI-CDQVAVIDQGRLV 220
>pir||D70020 ABC transporter (ATP-binding protein) homolog yusC - Bacillus
subtilis >gi|2635771|emb|CAB15264.1| (Z99120) similar to
ABC transporter (ATP-binding protein) [Bacillus
subtilis]
Length = 341
Score = 83.5 bits (203), Expect = 7e-15
Identities = 65/216 (30%), Positives = 102/216 (47%), Gaps = 32/216 (14%)
Query: 419 IQDLLKAFGVRHRVIQRPVLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGYWEE 478
+QD+ K + +H + ++N++ +I GE+ ++G SGAGK++L+RL+ G K
Sbjct: 4 LQDVSKVYKSKHGDVN--AVQNVSLSIKKGEIFGIIGYSGAGKSSLIRLLNGLEK----- 56
Query: 479 KYRPTSGKIEVPKNAKVSVLIPGEIEPEFGSETILEHVY----RKIRD------------ 522
PTSG +EV V G + I +H R +RD
Sbjct: 57 ---PTSGTVEVAGTKINEVNGRGLRKARHEISMIFQHFNLLWSRTVRDNIMFPLEIAGVK 113
Query: 523 ----LNAAVEVLNRAGLSDAVLYRAKFSELSTGQKERAKIASLLAERPNVLLIDEFAAHL 578
+ A E++ GL ++ S+LS GQK+R IA LA P VLL DE + L
Sbjct: 114 KSERIKRANELIKLVGLEGKE--KSYPSQLSGGQKQRVGIARALANNPKVLLCDEATSAL 171
Query: 579 DTLTAMRVARKVSEIVREAGITAVIITHRPEVVKAL 614
D T + +S+I G+T V+ITH V++ +
Sbjct: 172 DPQTTDSILDLLSDINERLGLTIVLITHEMHVIRKI 207
>pir||T22813 hypothetical protein F57A10.3 - Caenorhabditis elegans
>gi|3877814|emb|CAB09418.1| (Z96048) predicted using
Genefinder~contains similarity to Pfam domain: PF00005
(ABC transporter), Score=243.0, E-value=1.4e-69, N=1;
PF00664 (ABC transporter transmembrane region.),
Score=152.1, E-value=3.1e-42, N=1~cDNA EST EMBL:M75760
comes from thi>
Length = 733
Score = 83.5 bits (203), Expect = 7e-15
Identities = 69/226 (30%), Positives = 113/226 (49%), Gaps = 37/226 (16%)
Query: 425 AFGVRHRVIQRPVLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGYWEEKYRPTS 484
AFG R P+ N++F + G++ AVVG+SG+GK+T+ L+L Y PTS
Sbjct: 488 AFGYADR---DPLFHNISFDVPAGKITAVVGSSGSGKSTIASLLL--------RLYDPTS 536
Query: 485 GKIEV---------PKNAKVSVLIPGEIEPEFGSETILEHV-YRKIRDLNAA-VEVLNRA 533
G+I V P + + G+ EP S TI E++ Y + N E+++ A
Sbjct: 537 GRILVDGTDLKDIDPSYWRRHIGTVGQ-EPVLFSTTIKENIIYGSLEPENVTDAEIVSAA 595
Query: 534 GLSDAVLYRAKF------------SELSTGQKERAKIASLLAERPNVLLIDEFAAHLDTL 581
S+A + ++F S LS GQK+R IA L +PN+L++DE + LD
Sbjct: 596 DQSNADEFISRFPIKYDTKVGEHGSTLSGGQKQRIAIARALVNKPNILIMDEATSALDAS 655
Query: 582 TAMRVARKVSEIVREAGITAVIITHRPEVVKALDPDKVLFVGYGTV 627
+ V +++++ + T +II HR +K D+++ V G+V
Sbjct: 656 SEYLVRIALNKLLANSKQTVMIIAHRLSTIK--HADQIVVVDRGSV 699
>gb|AAA02976.1| (L06062) multi drug resistance P-glycoprotein [Leishmania donovani]
Length = 518
Score = 83.5 bits (203), Expect = 7e-15
Identities = 68/243 (27%), Positives = 119/243 (47%), Gaps = 35/243 (14%)
Query: 398 VFKNVTKVFESELDIKGLPQE-IQDLLKAFGVRHRVIQRP---VLRNLNFTINPGEVVAV 453
+FK + +V ++D G+P + ++ VR RP + R+LN TI G+ VA
Sbjct: 17 IFKAIDRVPPVDIDAGGVPVTGFKQSIEFRNVRFSYPTRPDMILFRDLNLTIKCGQKVAF 76
Query: 454 VGASGAGKTTLLRLILGAIKGYWEEKYRPTSGKI--------EVPKNAKVSVLIPGEIEP 505
G+SG GK++++ LI + Y P G + E+ + + + EP
Sbjct: 77 SGSSGCGKSSMIGLI--------QRFYDPVGGAVLCDGVDMRELCLHDWRNQIGIVSQEP 128
Query: 506 EFGSETILEHVYRKIRDLNAA----VEVLNRAGLSDAVL---------YRAKFSELSTGQ 552
+ T++E+V ++ NA +E +A + D ++ A S+LS GQ
Sbjct: 129 NLFAGTMMENV--RVGKPNATEEEVIEACRQANVHDTIMSLPDQYNTPVGAVGSQLSGGQ 186
Query: 553 KERAKIASLLAERPNVLLIDEFAAHLDTLTAMRVARKVSEIVREAGITAVIITHRPEVVK 612
K+R IA L +RP VLL+DE + LD + M V R + ++++ G+T ++I HR ++
Sbjct: 187 KQRIAIARALVKRPPVLLLDEATSALDRKSEMEVQRSLDQLMQRGGMTVIVIAHRLATIR 246
Query: 613 ALD 615
+D
Sbjct: 247 NVD 249
>gb|AAC31907.1| (AF075709) ABC transporter ATP-binding subunit [Pseudomonas putida]
Length = 270
Score = 83.1 bits (202), Expect = 9e-15
Identities = 67/226 (29%), Positives = 107/226 (46%), Gaps = 31/226 (13%)
Query: 412 IKGLPQEIQDLLKAFGVRHRVIQRPVLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGA 471
++G+P L K FG QR VLR ++ I G+ VA+VG SG GK+TLLRL+ G
Sbjct: 12 LRGIPLASNGLRKTFG------QREVLRGIDLHIPAGQFVAIVGRSGCGKSTLLRLLAGL 65
Query: 472 IKGYWEEKYRPTSGKIEVPKNAKVSVLIPGEIEPEFGSETILEHVYRKIRD--------- 522
+ PT+G++ A + L E + ++K+ D
Sbjct: 66 DQ--------PTAGELL----AGAAPLAEAREETRLMFQDARLLPWKKVIDNVGLGLKGD 113
Query: 523 -LNAAVEVLNRAGLSDAVLYRAKFSELSTGQKERAKIASLLAERPNVLLIDEFAAHLDTL 581
A++ L GL+D + LS GQK+R +A L +P +LL+DE LD L
Sbjct: 114 WRQRALDALEAVGLADRA--NEWPAALSGGQKQRVALARALIHQPRLLLLDEPLGALDAL 171
Query: 582 TAMRVARKVSEIVREAGITAVIITHRPEVVKALDPDKVLFVGYGTV 627
T + + + + + R+ G T +++TH A+ D+V+ + G V
Sbjct: 172 TRIEMQQLIERLWRQHGFTVLLVTHDVNEAVAV-ADRVILIEDGEV 216
>gb|AAA02977.1| (L01572) P-glycoprotein [Leishmania donovani]
Length = 1341
Score = 83.1 bits (202), Expect = 9e-15
Identities = 68/244 (27%), Positives = 119/244 (47%), Gaps = 37/244 (15%)
Query: 398 VFKNVTKVFESELDIKGLPQE-IQDLLKAFGVRHRVIQRP---VLRNLNFTINPGEVVAV 453
+FK + +V ++D G+P + ++ VR RP + R+LN TI G+ VA
Sbjct: 426 IFKAIDRVPPVDIDAGGVPVTGFKQSIEFRNVRFSYPTRPDMILFRDLNLTIKCGQKVAF 485
Query: 454 VGASGAGKTTLLRLILGAIKGYWEEKYRPTSGKIEVP---------KNAKVSVLIPGEIE 504
G+SG GK++++ LI + Y P G + + + + I + E
Sbjct: 486 SGSSGCGKSSMIGLI--------QRFYDPVGGAVLCDGVDLRELCLHDWRDQIGIVSQ-E 536
Query: 505 PEFGSETILEHVYRKIRDLNAA----VEVLNRAGLSDAVL---------YRAKFSELSTG 551
P + T++E+V ++ NA +E +A + D ++ A S+LS G
Sbjct: 537 PNLFAGTMMENV--RVGKPNATEEEVIEACRQANVHDTIMSLPDQYNTPVGAVGSQLSGG 594
Query: 552 QKERAKIASLLAERPNVLLIDEFAAHLDTLTAMRVARKVSEIVREAGITAVIITHRPEVV 611
QK+R IA L +RP VLL+DE + LD + M V R + ++++ G+T ++I HR +
Sbjct: 595 QKQRIAIARALVKRPPVLLLDEATSALDRKSEMEVQRSLDQLMQRGGMTVIVIAHRLATI 654
Query: 612 KALD 615
+ +D
Sbjct: 655 RNVD 658
>pir||G69192 ABC transporter (glutamine transport ATP-binding protein) -
Methanobacterium thermoautotrophicum (strain Delta H)
>gi|2621782|gb|AAB85201.1| (AE000849) ABC transporter
(glutamine transport ATP-binding protein)
[Methanobacterium thermoautotrophicum]
Length = 220
Score = 82.7 bits (201), Expect = 1e-14
Identities = 67/210 (31%), Positives = 108/210 (50%), Gaps = 31/210 (14%)
Query: 418 EIQDLLKAFGVRHRVIQRPVLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGYWE 477
E++DL K+F + L +N ++ GE ++++G SG+GK+TLL +I GA+
Sbjct: 5 EVRDLRKSFDSG----RIRALNGVNLEVDGGEFISIMGPSGSGKSTLLNMI-GALD---- 55
Query: 478 EKYRPTSGKI-----EVPKNAKVSVLIPGEIEPEF------GSETILEHV------YRKI 520
P SG I ++ + +S L EI F + T LE+V +
Sbjct: 56 ---VPDSGTICVAGRDLSRERDLSRLRAEEIGFVFQLHNLIPNLTALENVEIPMFAVKHE 112
Query: 521 RDLNAAVEVLNRAGLSDAVLYRAKFSELSTGQKERAKIASLLAERPNVLLIDEFAAHLDT 580
A+E+L L+D K +ELS G+++R IA LA P+++L DE LD+
Sbjct: 113 NMEERAMELLEYVDLADKA--HRKPTELSGGERQRVAIARALANDPSIILADEPTGSLDS 170
Query: 581 LTAMRVARKVSEIVREAGITAVIITHRPEV 610
T+ RV RK+ E+ + G+T V++TH P+V
Sbjct: 171 RTSQRVLRKLRELQEDEGVTLVVVTHEPDV 200
>emb|CAB01940.1| (Z79692) ExpD1 [Sinorhizobium meliloti]
Length = 589
Score = 82.3 bits (200), Expect = 1e-14
Identities = 63/210 (30%), Positives = 105/210 (50%), Gaps = 35/210 (16%)
Query: 433 IQRPVLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGYWEEKYRPTSGKIEVPKN 492
I P+++ +NF+++PGEV+ +VG S AGK+TL RL++G +K PT+G + + N
Sbjct: 363 IDVPIIKGINFSLSPGEVLGIVGPSAAGKSTLARLLVGILK--------PTAGGVFLDGN 414
Query: 493 ----------AKVSVLIPGEIEPEFGSETILEHVYRKIRDLNAAVEVLNRAGLSDA--VL 540
+++ +P + G TI E++ R + +VL A L+D ++
Sbjct: 415 NVYLWERSSFGQIAGYLPQSVSLLEG--TIRENIARMAE--SDPYKVLEAARLADVHDMI 470
Query: 541 YRAKFS----------ELSTGQKERAKIASLLAERPNVLLIDEFAAHLDTLTAMRVARKV 590
R LS GQ++R +A L RP +L++DE A+LD L + R +
Sbjct: 471 GRLPLGYDTPVGDGHLTLSGGQRQRIAVARCLYGRPRLLVLDEPNANLDALGERALIRAI 530
Query: 591 SEIVREAGITAVIITHRPEVVKALDPDKVL 620
E R G ++I HRP +++ D VL
Sbjct: 531 DE-ARSDGAIVILIAHRPAIMQVADKLLVL 559
>pir||G72255 ABC transporter, ATP-binding protein - Thermotoga maritima (strain
MSB8) >gi|4981982|gb|AAD36488.1|AE001794_4 (AE001794)
ABC transporter, ATP-binding protein [Thermotoga
maritima]
Length = 245
Score = 82.3 bits (200), Expect = 1e-14
Identities = 60/222 (27%), Positives = 112/222 (50%), Gaps = 23/222 (10%)
Query: 421 DLLKAFGVRHRVIQRPVLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGYWEEKY 480
++L+ V + V + +L+ +N V +++G +GAGK+TL LI+G E Y
Sbjct: 2 NVLELIDVWYEVEGKAILKGINARFEKQRVYSILGTNGAGKSTLAYLIMGL------EGY 55
Query: 481 RPTSGKI----------EVPKNAKVSVLIPGEIEPEFGSETILEHVY---RKIRDLNAAV 527
RPT GKI V + AK + + + F I +++ R+
Sbjct: 56 RPTRGKILLDGEDITDLSVTERAKRGITLMWQEPARFTGIKIRDYLTLGGRRKVSKEELE 115
Query: 528 EVLNRAGLSDAVLYRAKFSE-LSTGQKERAKIASLLAERPNVLLIDEFAAHLDTLTAMRV 586
VL GL+ A+ E LS G+++R ++AS+L +P ++DE + +D ++ +
Sbjct: 116 RVLELVGLNPALYLERNVDEKLSGGERKRVELASILLMKPRYTILDEPDSGIDIMSLEMI 175
Query: 587 ARKVSEIVREAGITAVIITHRPEVVKALDPDKVLFVGYGTVI 628
+ +SE+V AG + +++THR E+ AL+ D + +G+++
Sbjct: 176 EKVLSELV-SAGGSVILVTHREEI--ALESDYAFLICHGSIL 214
>pir||A71243 probable maltose/maltodextrin transport ATP-binding protein -
Pyrococcus horikoshii >gi|3256589|dbj|BAA29272.1|
(AP000001) 362aa long hypothetical maltose/maltodextrin
transport ATP-binding protein [Pyrococcus horikoshii]
Length = 362
Score = 82.3 bits (200), Expect = 1e-14
Identities = 67/226 (29%), Positives = 113/226 (49%), Gaps = 32/226 (14%)
Query: 418 EIQDLLKAFGVRHRVIQRPVLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGYWE 477
++++++K FG L N+N I GE +A++G SG+GK+TLL I G
Sbjct: 5 KLENIVKKFG------NFTALNNINLKIKDGEFMALLGPSGSGKSTLLYTIAGI------ 52
Query: 478 EKYRPTSGKIEVPKNAKVSVLIPGE--IEPEFGSETILEH--VYRKI-----------RD 522
Y+PTSGKI + V+ L P + + F + + H VY+ I +
Sbjct: 53 --YKPTSGKIYFDEK-DVTELPPKDRNVGLVFQNWALYPHMTVYKNIAFPLELRKAPREE 109
Query: 523 LNAAVEVLNRAGLSDAVLYRAKFSELSTGQKERAKIASLLAERPNVLLIDEFAAHLDTLT 582
++ V + + D +L R + +LS GQ++R IA L + P VLL+DE ++LD L
Sbjct: 110 IDKKVREVAKMLHIDKLLNRYPW-QLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALL 168
Query: 583 AMRVARKVSEIVREAGITAVIITHRPEVVKALDPDKVLFVGYGTVI 628
+ V ++ + +E GIT V +TH A+ D++ + G ++
Sbjct: 169 RLEVRAELKRLQKELGITTVYVTHDQAEALAM-ADRIAVIREGEIL 213
>dbj|BAB04005.1| (AP001508) ABC transporter (ATP-binding protein) [Bacillus
halodurans]
Length = 259
Score = 82.3 bits (200), Expect = 1e-14
Identities = 71/229 (31%), Positives = 111/229 (48%), Gaps = 31/229 (13%)
Query: 418 EIQDLLKAFGVRHRVIQRPVLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGYWE 477
E+QDL K +G ++ + + L+ +NF I PGE + ++G SG+GKTTLL I IK
Sbjct: 9 EVQDLQKNYGKKNNLTK--ALKGVNFDILPGEFLGIMGPSGSGKTTLLNCIATIIK---- 62
Query: 478 EKYRPTSGKIEVP-KN---------AKVSVLIPGEIEPEF-------GSETILEHV-YRK 519
PTSG++ + KN AK G + +F G E IL +
Sbjct: 63 ----PTSGRVLLHGKNISAFDSKDLAKYRGSRIGYLFQDFELLDNLTGQENILLPLAIHG 118
Query: 520 IRDLNAAVEVLNRAGLSDAVLYRAKF-SELSTGQKERAKIASLLAERPNVLLIDEFAAHL 578
+ A V++ A + D KF S++S GQK+R A L P+++L DE L
Sbjct: 119 VDFTKARVKLDELASILDIADILHKFPSQMSGGQKQRVAAARCLISDPDIVLADEPTGAL 178
Query: 579 DTLTAMRVARKVSEIVREAGITAVIITHRPEVVKALDPDKVLFVGYGTV 627
DT +A + K+ I R +G T ++++H P ++LF+ G +
Sbjct: 179 DTRSARTLMTKLESINRSSGRTILMVSHDPNAASFC--SRILFIQDGVI 225
>dbj|BAA77876.1| (D83536) ATP-binding protein ABC. [Escherichia coli]
Length = 343
Score = 81.9 bits (199), Expect = 2e-14
Identities = 69/232 (29%), Positives = 107/232 (45%), Gaps = 35/232 (15%)
Query: 418 EIQDLLKAFGVRHRVIQRPVLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGYWE 477
++ ++ K F R IQ L N++ + G++ V+GASGAGK+TL+R +
Sbjct: 3 KLSNITKVFHQGTRTIQ--ALNNVSLHVPAGQIYGVIGASGAGKSTLIRCV--------N 52
Query: 478 EKYRPTSGKIEVPKNAKVSVLIPGEIEPE-------------FGSETILEHVYRKIRDLN 524
RPT G + V +++ L E+ S T+ +V ++ N
Sbjct: 53 LLERPTEGSVLVD-GQELTTLSESELTKARRQIGMIFQHFNLLSSRTVFGNVALRLELDN 111
Query: 525 A--------AVEVLNRAGLSDAVLYRAKFSELSTGQKERAKIASLLAERPNVLLIDEFAA 576
E+L+ GL D + + S LS GQK+R IA LA P VLL DE +
Sbjct: 112 TPKDEVKRRVTELLSLVGLGDK--HDSYPSNLSGGQKQRVAIARALASNPKVLLCDEATS 169
Query: 577 HLDTLTAMRVARKVSEIVREAGITAVIITHRPEVVKALDPDKVLFVGYGTVI 628
LD T + + +I R G+T ++ITH +VVK + D V + G +I
Sbjct: 170 ALDPATTRSILELLKDINRRLGLTILLITHEMDVVKRI-CDCVAVISNGELI 220
>sp|P54537|YQIZ_BACSU PROBABLE AMINO-ACID ABC TRANSPORTER ATP-BINDING PROTEIN IN
BMRU-ANSR INTERGENIC REGION >gi|7442518|pir||H69962
ABC-type transport protein yqiZ - Bacillus subtilis
>gi|1303951|dbj|BAA12606.1| (D84432) YqiZ [Bacillus
subtilis] >gi|2634830|emb|CAB14327.1| (Z99116) similar
to amino acid ABC transporter (ATP-binding protein)
[Bacillus subtilis]
Length = 240
Score = 81.9 bits (199), Expect = 2e-14
Identities = 71/228 (31%), Positives = 116/228 (50%), Gaps = 32/228 (14%)
Query: 418 EIQDLLKAFGVRHRVIQRPVLRNLNFTINPGEVVAVVGASGAGKTTLLRLIL-------G 470
+++ L K+FG + VL+N++ TI GEVVAV+G SG+GK+T LR + G
Sbjct: 3 KVEKLSKSFG------KHEVLKNISTTIAEGEVVAVIGPSGSGKSTFLRCLNLLEKPNGG 56
Query: 471 AIKGYWEEKYRPTSGKIEVPKNAKVSVLIPGEIEPEFGSETILEHVY---------RKIR 521
I E +P + ++V +N + + + F +T+LE++ K
Sbjct: 57 TITIKDTEITKPKTNTLKVREN----IGMVFQHFHLFPHKTVLENIMYAPVNVKKESKQA 112
Query: 522 DLNAAVEVLNRAGLSDAVLYRAKF-SELSTGQKERAKIASLLAERPNVLLIDEFAAHLDT 580
A ++L + GL + R + + LS GQK+R IA LA P+++L DE + LD
Sbjct: 113 AQEKAEDLLRKVGLFEK---RNDYPNRLSGGQKQRVAIARALAMNPDIMLFDEPTSALDP 169
Query: 581 LTAMRVARKVSEIVREAGITAVIITHRPEVVKALDPDKVLFVGYGTVI 628
V + + E+V E G+T VI+TH K + D+VLF+ G ++
Sbjct: 170 EMVKEVLQVMKELV-ETGMTMVIVTHEMGFAKEV-ADRVLFMDQGMIV 215
>pir||G81955 ABC-transport system ATP-binding protein NMA0393 [imported] -
Neisseria meningitidis (group A strain Z2491)
>gi|7379146|emb|CAB83694.1| (AL162753) ABC-transport
system ATP-binding protein [Neisseria meningitidis
Z2491]
Length = 312
Score = 81.5 bits (198), Expect = 3e-14
Identities = 62/205 (30%), Positives = 101/205 (49%), Gaps = 27/205 (13%)
Query: 418 EIQDLLKAFGVRHRVIQRPVLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGYWE 477
E+ L K FG + V ++ T+ G+++AV+G SG GK+TLL +I G +
Sbjct: 3 ELNGLCKRFG------GKTVADDICLTVGRGKILAVLGRSGCGKSTLLNMIAGIV----- 51
Query: 478 EKYRPTSGKIEV---------PKNAKVSVLIPG-EIEPEFGSETILEHVYRKIRDLNAAV 527
RP G+I + P+ ++S++ + P + + + A
Sbjct: 52 ---RPDGGEIWLNGENITRMPPEKRRISLMFQDYALFPHMSALENAAFGLKMQKMPKAEA 108
Query: 528 EVLNRAGLSDAVL---YRAKFSELSTGQKERAKIASLLAERPNVLLIDEFAAHLDTLTAM 584
E L A L++ L K +LS G+K+R +A L RP++LL+DE + LDT
Sbjct: 109 ESLAMAALAEVGLENEAHRKPEKLSGGEKQRLALARALVVRPSLLLLDESFSSLDTHLRD 168
Query: 585 RVARKVSEIVREAGITAVIITHRPE 609
R+ R +E +R+ GI AV++TH PE
Sbjct: 169 RLRRMTAERIRKGGIPAVLVTHSPE 193
>pir||E72757 probable phosphate transport ATP-binding protein pstB APE0050 -
Aeropyrum pernix (strain K1) >gi|5103438|dbj|BAA78959.1|
(AP000058) 253aa long hypothetical phosphate transport
ATP-binding protein pstB [Aeropyrum pernix]
Length = 253
Score = 81.1 bits (197), Expect = 3e-14
Identities = 63/224 (28%), Positives = 112/224 (49%), Gaps = 19/224 (8%)
Query: 423 LKAFGVRHRVIQRPVLRNLNFTINPGEVVAVVGASGAGKTTLLRLI------LGAIKGYW 476
++ G+ + + +L+ ++F PG V A++G SG+GK+TL+R+I + +
Sbjct: 6 VRVSGLNVWITDKHILKGISFKAQPGTVTAIMGPSGSGKSTLIRVINRLIDLIPGARVEG 65
Query: 477 EEKYRPTSGKIEVPKNAKVSVLIPGEIEPEFGSETILEHVY---------RKIRDLNAAV 527
E + E P N + + + F TI E+V + ++L+ V
Sbjct: 66 EVWINNMNVMKEDPYNIRRYTGMVFQEPNPFPHMTIYENVAIGPKLHGLAKNKKELDEIV 125
Query: 528 E-VLNRAGLSDAVLYRAKF--SELSTGQKERAKIASLLAERPNVLLIDEFAAHLDTLTAM 584
E L A L D V R +LS GQ++R +A LA +P VLL+DE A++D ++ +
Sbjct: 126 EWALKMAHLWDEVKDRLSDYPHQLSGGQRQRLSLARALALKPRVLLLDEPTANIDPVSTV 185
Query: 585 RVARKVSEIVREAGITAVIITHRPEVVKALDPDKVLFVGYGTVI 628
++ + + E +E T +I+TH P+ + D++LF+ G VI
Sbjct: 186 KIEQSIVEYAKEEMATVIIVTHTPQQAARIS-DQILFLYEGRVI 228
>pir||G81012 spermidine/putrescine ABC transporter, ATP-binding protein NMB2042
[imported] - Neisseria meningitidis (group B strain
MD58) >gi|7227304|gb|AAF42363.1| (AE002554)
spermidine/putrescine ABC transporter, ATP-binding
protein [Neisseria meningitidis MC58]
Length = 312
Score = 81.1 bits (197), Expect = 3e-14
Identities = 62/205 (30%), Positives = 99/205 (48%), Gaps = 27/205 (13%)
Query: 418 EIQDLLKAFGVRHRVIQRPVLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGYWE 477
E+ L K FG + V N+ T+ G+++AV+G SG GK+TLL +I G +
Sbjct: 3 ELNGLCKRFG------NKTVADNICLTVGRGKILAVLGRSGCGKSTLLNIIAGIV----- 51
Query: 478 EKYRPTSGKIEV---------PKNAKVSVLIPG-EIEPEFGSETILEHVYRKIRDLNAAV 527
RP G+I + P+ ++S++ + P + + + A
Sbjct: 52 ---RPDGGEIWLNGENITRMPPEKRRISLMFQDYALFPHMSALENAAFGLKMQKMPKAEA 108
Query: 528 EVLNRAGLSDAVL---YRAKFSELSTGQKERAKIASLLAERPNVLLIDEFAAHLDTLTAM 584
E L A L++ L K +LS G+K+R +A L RP++LL+DE + LDT
Sbjct: 109 ERLAMAALAEVGLENEAHRKPEKLSGGEKQRLALARALVVRPSLLLLDESFSSLDTHLRG 168
Query: 585 RVARKVSEIVREAGITAVIITHRPE 609
+ R +E +R GI AV++TH PE
Sbjct: 169 TLRRMTAERIRNGGIPAVLVTHSPE 193
>dbj|BAB07610.1| (AP001520) ABC transporter (ATP-binding protein) [Bacillus
halodurans]
Length = 577
Score = 81.1 bits (197), Expect = 3e-14
Identities = 74/241 (30%), Positives = 117/241 (47%), Gaps = 34/241 (14%)
Query: 399 FKNVTKVFESELDIKGLPQ----EIQDLLKAFGVRHRVI-QRPVLRNLNFTINPGEVVAV 453
FK T++ ++E DI+ P IQ ++ GVR VL+N++ TI GE VA
Sbjct: 304 FKRYTEILDTEPDIEDAPGAKEWNIQGNIQYEGVRFGYDGMEDVLKNIDLTIRAGETVAF 363
Query: 454 VGASGAGKTTLLRLILGAIKGYWEEKYRPTSGKIEVP----KNAKVSVLIP--GEIEPE- 506
VG SGAGKTTL L+ Y G+I V + K+ L G ++ +
Sbjct: 364 VGPSGAGKTTLCSLL--------PRFYEVKDGRIVVDGLDIREMKLESLRNQIGIVQQDV 415
Query: 507 -FGSETILEHV-YRKIRDLNAAV-EVLNRAGLSDAVLYRAKFSE---------LSTGQKE 554
S T+ E++ Y ++ + + E +A L D +L + E LS GQK+
Sbjct: 416 FLFSGTVKENIAYGNLQATDEEIMEAARKAKLDDFILSQPDGLETVIGERGVKLSGGQKQ 475
Query: 555 RAKIASLLAERPNVLLIDEFAAHLDTLTAMRVARKVSEIVREAGITAVIITHRPEVVKAL 614
R IA + + P +L++DE + LDT T + + + +SE+ + G T ++I HR +K
Sbjct: 476 RLSIARMFLKNPPILILDEATSALDTETELAIQQSLSELSK--GRTTLVIAHRLATIKNA 533
Query: 615 D 615
D
Sbjct: 534 D 534
>pir||T32865 hypothetical protein ZK484.2 - Caenorhabditis elegans
>gi|2746911|gb|AAB95060.1| (AF040659) similar to the
ATP-binding transport protein family [Caenorhabditis
elegans]
Length = 811
Score = 80.4 bits (195), Expect = 6e-14
Identities = 62/213 (29%), Positives = 102/213 (47%), Gaps = 34/213 (15%)
Query: 436 PVLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGYWEEKYRPTSGKIEVP----- 490
P++ +L FT+ PGEVVA+VG SG GK++ + ++ E Y PTSG++ +
Sbjct: 534 PIMEDLTFTVEPGEVVALVGPSGGGKSSCIAML--------EHFYEPTSGEVLIDGVPVR 585
Query: 491 ----KNAKVSVLIPGEIEPEFGSETILEH------------VYRKIRDLNAAVEVLNRAG 534
K V + G+ EP + ++ E+ V + NA ++N
Sbjct: 586 EYDHKFLHTKVALVGQ-EPVLYARSVTENIGYGLDKYDDDMVQNSAKLANAHTFIMNDTT 644
Query: 535 LSDAVLYRAKFSELSTGQKERAKIASLLAERPNVLLIDEFAAHLDTLTAMRVARKVSEIV 594
K S++S GQK+R IA L +P VLL+DE + LD + V +S+ +
Sbjct: 645 DGYNTNVGEKGSQMSGGQKQRIAIARALVRQPVVLLLDEATSALDAESEHTVQEAISKNL 704
Query: 595 REAGITAVIITHRPEVVKALDPDKVLFVGYGTV 627
+ G T ++I HR V+ + DK++ + G V
Sbjct: 705 K--GKTVILIAHRLSTVE--NADKIVVINKGKV 733
>emb|CAB41455.1| (Y08703) ABC transporter [Sinorhizobium meliloti]
Length = 589
Score = 80.4 bits (195), Expect = 6e-14
Identities = 62/207 (29%), Positives = 103/207 (48%), Gaps = 35/207 (16%)
Query: 436 PVLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGYWEEKYRPTSGKIEVPKN--- 492
P+++ +NF+++PGEV+ +VG S AGK+TL RL+ G +K PT+G + + N
Sbjct: 366 PIIKGINFSLSPGEVLGIVGPSAAGKSTLARLLTGILK--------PTAGGVFLDGNNVY 417
Query: 493 -------AKVSVLIPGEIEPEFGSETILEHVYRKIRDLNAAVEVLNRAGLSDA--VLYRA 543
+V+ +P + G TI E++ R + +VL A L+D ++ R
Sbjct: 418 LWERSSFGQVAGYLPQSVSLLEG--TIRENIARMAE--SDPYKVLEAARLADVHDMIGRL 473
Query: 544 KFS----------ELSTGQKERAKIASLLAERPNVLLIDEFAAHLDTLTAMRVARKVSEI 593
LS GQ++R +A L RP +L++DE A+LD + + R + E
Sbjct: 474 PLGYDTPVGDGHLTLSGGQRQRIALARCLYGRPRLLVLDEPNANLDAIGERALIRAIEE- 532
Query: 594 VREAGITAVIITHRPEVVKALDPDKVL 620
R G ++I HRP +++ D VL
Sbjct: 533 ARRDGAIVILIAHRPAIMQVADKLLVL 559
>pir||H64716 ABC transporter, ATP-binding protein - Helicobacter pylori (strain
26695) >gi|2314761|gb|AAD08616.1| (AE000655) ABC
transporter, ATP-binding protein (abc) [Helicobacter
pylori 26695]
Length = 327
Score = 80.4 bits (195), Expect = 6e-14
Identities = 66/216 (30%), Positives = 109/216 (49%), Gaps = 31/216 (14%)
Query: 438 LRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGYWEEKYRPTSGKIEV-------- 489
L+ +N + G+++ V+G SGAGK+TL+RLI RP+SG++ V
Sbjct: 19 LKGVNLELKKGDILGVIGYSGAGKSTLIRLI--------NCLERPSSGEVLVNGVNLLKL 70
Query: 490 -PKNAKVSVLIPGEIEPEFG---SETILEHV--------YRKIRDLNAAVEVLNRAGLSD 537
PK + + G I F ++ + E+V + K + + E+L GL D
Sbjct: 71 KPKELQKARQKIGMIFQHFNLLSAKNVFENVAFALEIARWEKNKIKSRVHELLELVGLED 130
Query: 538 AVLYRAKFSELSTGQKERAKIASLLAERPNVLLIDEFAAHLDTLTAMRVARKVSEIVREA 597
+ + K +LS GQK+R IA LA P++LL DE + LD+ T + +S I ++
Sbjct: 131 KMHFYPK--QLSGGQKQRVAIARSLANCPDLLLCDEATSALDSKTTHSILTLLSGIQKKL 188
Query: 598 GITAVIITHRPEVVKALDPDKVLFVGYGTVIVRKSL 633
++ V ITH EVVK L +++ + G ++ R S+
Sbjct: 189 DLSIVFITHEIEVVKEL-CNQMCVISSGEIVERGSV 223
>pir||G83214 probable ATP-binding component of ABC transporter PA3442 [imported]
- Pseudomonas aeruginosa (strain PAO1)
>gi|9949583|gb|AAG06830.1|AE004765_3 (AE004765) probable
ATP-binding component of ABC transporter [Pseudomonas
aeruginosa]
Length = 274
Score = 80.4 bits (195), Expect = 6e-14
Identities = 62/221 (28%), Positives = 114/221 (51%), Gaps = 23/221 (10%)
Query: 413 KGLPQEIQDLLKAFGVRHRVIQRPVLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAI 472
+G+P ++ + + FG +R VL++++ + G+ VA+VG SG GK+TLLRL+ G
Sbjct: 17 RGIPLALRGVARRFG------EREVLKDIDLLVPAGQFVAIVGRSGCGKSTLLRLLAGLD 70
Query: 473 KGYWEEKYRPTSGKIEVPKNAKV----SVLIPGEIEPEFGSETILEHVYRKIR-DLNA-A 526
+ E ++ E ++ ++ S L+P + ++++V +R D A A
Sbjct: 71 QPSRGELLAGSAALAEAREDTRLMFQDSRLLPWK--------RVIDNVGLGLRGDWRAKA 122
Query: 527 VEVLNRAGLSDAVLYRAKFSELSTGQKERAKIASLLAERPNVLLIDEFAAHLDTLTAMRV 586
++ L GL++ + LS GQK+R +A L P +LL+DE LD LT + +
Sbjct: 123 LQALRAVGLAERA--NEWPAALSGGQKQRVALARALIHEPRLLLLDEPLGALDALTRIEM 180
Query: 587 ARKVSEIVREAGITAVIITHRPEVVKALDPDKVLFVGYGTV 627
+ + + RE G T +++TH A+ D+V+ + G +
Sbjct: 181 QQLIEGLWREHGFTVLLVTHDVSEAVAV-ADRVILIEDGEI 220
>pir||F72510 probable multiple sugar-binding transport ATP-binding protein
APE2060 - Aeropyrum pernix (strain K1)
>gi|5105758|dbj|BAA81070.1| (AP000063) 388aa long
hypothetical multiple sugar-binding transport
ATP-binding protein [Aeropyrum pernix]
Length = 388
Score = 80.4 bits (195), Expect = 6e-14
Identities = 58/204 (28%), Positives = 105/204 (51%), Gaps = 24/204 (11%)
Query: 438 LRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGYWEEKYRPTSGKI--------EV 489
+R++N I E V+++G SG+GKTTLL LI G Y+P+ G+I ++
Sbjct: 16 VRDVNLYIEDKEFVSILGPSGSGKTTLLYLIAGI--------YKPSRGRIYFNDVDVTDL 67
Query: 490 PKNAKVSVLIPGEIEPEFGSETILEHVYRKIRDLNAAVEVLNRAGLSDAVLYRAKF---- 545
P N K ++ + + + T+ E++ +R N + LS A L +
Sbjct: 68 PPN-KRNIGLVFQNYALYPHMTVYENIAFPLRLRNFGEPAIKEKVLSVAKLLGIEGLLDR 126
Query: 546 --SELSTGQKERAKIASLLAERPNVLLIDEFAAHLDTLTAMRVARKVSEIVREAGITAVI 603
++LS GQ++R +A L + P VLL+DE ++LD L +++ ++ ++ +E GITA+
Sbjct: 127 YPAQLSGGQQQRVALARALVKEPEVLLLDEPLSNLDALLRIKIRSELKKLQKELGITAIY 186
Query: 604 ITHRPEVVKALDPDKVLFVGYGTV 627
+TH A+ D++ + G +
Sbjct: 187 VTHDQSEALAM-ADRIAIIASGVI 209
>gi|10955699 ABC transporter [Yersinia pestis] >gi|7467316|pir||T14673 ABC
transport protein - Yersinia pestis plasmid pMT1
>gi|2996308|gb|AAC13188.1| (AF053947) ABC transporter
[Yersinia pestis]
Length = 212
Score = 80.0 bits (194), Expect = 7e-14
Identities = 60/199 (30%), Positives = 96/199 (48%), Gaps = 26/199 (13%)
Query: 421 DLLKAFGVRHRVIQRPVLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGYWEEKY 480
++ ++FG+ + + NL + G+VV + G SG+GK+ +LR
Sbjct: 22 EIAESFGLGLDEKEWTLYDNLELEVKQGDVVYITGQSGSGKSVVLR-------------- 67
Query: 481 RPTSGKIEVPKNAKVSVLIPGEIEP-EFGSET-ILEHVYRKIRDLNAAVEVLNRAGLSDA 538
E+ + K L I+ F +E +++ + + D A+ +L+ AGL+DA
Sbjct: 68 -------ELQRQMKDEGLSVASIDDFTFNNEVNVIDQLGKTTSD---ALGLLSMAGLNDA 117
Query: 539 VLYRAKFSELSTGQKERAKIASLLAERPNVLLIDEFAAHLDTLTAMRVARKVSEIVREAG 598
L+ K SE+S GQK R KIA L+ V DEF A LD +TA VA + R+ G
Sbjct: 118 YLFVRKPSEMSDGQKYRLKIAKLIESGAKVWAADEFGAVLDRVTAQVVASNLQRAARKVG 177
Query: 599 ITAVIITHRPEVVKALDPD 617
T ++ T ++ AL PD
Sbjct: 178 ATVMVATTHEDLKNALRPD 196
>gi|10955870 putative ABC transporter [Yersinia pestis] >gi|7467450|pir||T14941
probable ABC transporter - Yersinia pestis plasmid pMT1
>gi|3883026|gb|AAC82686.1| (AF074611) putative ABC
transporter [Yersinia pestis]
>gi|5834712|emb|CAB55209.1| (AL117211) putative ABC
transporter ATP-binding protein [Yersinia pestis]
Length = 232
Score = 80.0 bits (194), Expect = 7e-14
Identities = 60/199 (30%), Positives = 96/199 (48%), Gaps = 26/199 (13%)
Query: 421 DLLKAFGVRHRVIQRPVLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGYWEEKY 480
++ ++FG+ + + NL + G+VV + G SG+GK+ +LR
Sbjct: 42 EIAESFGLGLDEKEWTLYDNLELEVKQGDVVYITGQSGSGKSVVLR-------------- 87
Query: 481 RPTSGKIEVPKNAKVSVLIPGEIEP-EFGSET-ILEHVYRKIRDLNAAVEVLNRAGLSDA 538
E+ + K L I+ F +E +++ + + D A+ +L+ AGL+DA
Sbjct: 88 -------ELQRQMKDEGLSVASIDDFTFNNEVNVIDQLGKTTSD---ALGLLSMAGLNDA 137
Query: 539 VLYRAKFSELSTGQKERAKIASLLAERPNVLLIDEFAAHLDTLTAMRVARKVSEIVREAG 598
L+ K SE+S GQK R KIA L+ V DEF A LD +TA VA + R+ G
Sbjct: 138 YLFVRKPSEMSDGQKYRLKIAKLIESGAKVWAADEFGAVLDRVTAQVVASNLQRAARKVG 197
Query: 599 ITAVIITHRPEVVKALDPD 617
T ++ T ++ AL PD
Sbjct: 198 ATVMVATTHEDLKNALRPD 216
>gb|AAB69130.1| (U63320) P-glycoprotein [Leishmania tropica]
Length = 1341
Score = 80.0 bits (194), Expect = 7e-14
Identities = 66/244 (27%), Positives = 117/244 (47%), Gaps = 37/244 (15%)
Query: 398 VFKNVTKVFESELDIKGLPQE-IQDLLKAFGVRHRVIQRP---VLRNLNFTINPGEVVAV 453
+FK + +V ++D G+P + ++ VR RP + R+LN I G+ VA
Sbjct: 426 IFKAIDRVPPVDIDADGVPVTGFKQSIEFRNVRFSYPTRPDMILFRDLNLKIKCGQKVAF 485
Query: 454 VGASGAGKTTLLRLILGAIKGYWEEKYRPTSGKIEVP---------KNAKVSVLIPGEIE 504
G+SG GK++++ LI + Y P G + + + + I + E
Sbjct: 486 SGSSGCGKSSMIGLI--------QRFYDPAGGAVLCDGVDMRELCLHDWRDQIGIVSQ-E 536
Query: 505 PEFGSETILEHVYRKIRDLNAA----VEVLNRAGLSDAVL---------YRAKFSELSTG 551
P + T++E+V ++ NA +E +A + D ++ A S+LS G
Sbjct: 537 PILFAGTMMENV--RVGKPNATEEEVIEACRQANVHDTIMSLPDQYNTPVGAVGSQLSGG 594
Query: 552 QKERAKIASLLAERPNVLLIDEFAAHLDTLTAMRVARKVSEIVREAGITAVIITHRPEVV 611
QK+R IA L +RP +LL+DE + LD + M V R + +++ G+T ++I HR +
Sbjct: 595 QKQRIAIARALVKRPPILLLDEATSALDRKSEMEVQRSLDQLMERGGVTVIVIAHRLATI 654
Query: 612 KALD 615
+ +D
Sbjct: 655 RNVD 658
>gi|11498288 glutamine ABC transporter, ATP-binding protein (glnQ)
[Archaeoglobus fulgidus] >gi|7442524|pir||H69334
glutamine transport protein glnQ - Archaeoglobus
fulgidus >gi|2649950|gb|AAB90561.1| (AE001058) glutamine
ABC transporter, ATP-binding protein (glnQ)
[Archaeoglobus fulgidus]
Length = 242
Score = 80.0 bits (194), Expect = 7e-14
Identities = 68/231 (29%), Positives = 109/231 (46%), Gaps = 38/231 (16%)
Query: 418 EIQDLLKAFGVRHRVIQRPVLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGYWE 477
EI DL K FG + VL+ + + GEVV ++G SG+GK+TLLR I
Sbjct: 5 EIIDLHKRFG------ELEVLKGVTMKVEKGEVVVIIGPSGSGKSTLLRCI--------N 50
Query: 478 EKYRPTSGKIEVP----KNAKVSV-LIPGEIEPEFGSETILEHVYR---------KIRDL 523
PTSGKI + N+K+ + + I F + H+ KI+ +
Sbjct: 51 RLEEPTSGKILLDGVDITNSKIDINKVRQRIGIVFQQFNLFPHLTALQNVTLAPIKIKKM 110
Query: 524 N------AAVEVLNRAGLSDAVLYRAKFSELSTGQKERAKIASLLAERPNVLLIDEFAAH 577
+ + +L + GL D Y ++LS GQ++R IA LA P V+L DE +
Sbjct: 111 SKREAEELGMRLLEKVGLEDKADYYP--AQLSGGQQQRVAIARALAMNPEVMLFDEVTSA 168
Query: 578 LDTLTAMRVARKVSEIVREAGITAVIITHRPEVVKALDPDKVLFVGYGTVI 628
LD V + ++ R+ G+T V++TH + + D+V+F+ G ++
Sbjct: 169 LDPELVKEVLDVMKQLARD-GMTMVVVTHEMGFAREVG-DRVIFMDGGVIV 217
>gi|9955963 ATP-binding cassette, sub-family B, member 6 [Homo sapiens]
>gi|8452823|gb|AAF75107.1|AF076775_1 (AF076775) MT-ABC
transporter [Homo sapiens] >gi|8547018|dbj|BAA96733.1|
(AB039371) mitochondrial ABC transporter 3 [Homo
sapiens] >gi|9187501|emb|CAB95766.2| (AJ289233) ABC
transporter umat [Homo sapiens]
Length = 842
Score = 80.0 bits (194), Expect = 7e-14
Identities = 60/216 (27%), Positives = 110/216 (50%), Gaps = 33/216 (15%)
Query: 435 RPVLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGYWEEKYRPTSGKIEVPKNAK 494
R L++++FT+ PG+ +A+VG SGAGK+T+LRL+ Y +SG I +
Sbjct: 603 RETLQDVSFTVMPGQTLALVGPSGAGKSTILRLLF--------RFYDISSGCIRI-DGQD 653
Query: 495 VSVLIPGEIEPEFG---------SETILEHV-YRKIRDLNAAVE-VLNRAGLSDAVL--- 540
+S + + G ++TI +++ Y ++ N VE AG+ DA++
Sbjct: 654 ISQVTQASLRSHIGVVPQDTVLFNDTIADNIRYGRVTAGNDEVEAAAQAAGIHDAIMAFP 713
Query: 541 --YRAKFSE----LSTGQKERAKIASLLAERPNVLLIDEFAAHLDTLTAMRVARKVSEIV 594
YR + E LS G+K+R IA + + P ++L+DE + LDT + ++++
Sbjct: 714 EGYRTQVGERGLKLSGGEKQRVAIARTILKAPGIILLDEATSALDTSNERAIQASLAKVC 773
Query: 595 REAGITAVIITHRPEVVKALDPDKVLFVGYGTVIVR 630
A T +++ HR V ++ D++L + G ++ R
Sbjct: 774 --ANRTTIVVAHRLSTV--VNADQILVIKDGCIVER 805
>gb|AAC28653.1| (AF070598) ABC transporter [Homo sapiens]
Length = 511
Score = 80.0 bits (194), Expect = 7e-14
Identities = 60/216 (27%), Positives = 110/216 (50%), Gaps = 33/216 (15%)
Query: 435 RPVLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGYWEEKYRPTSGKIEVPKNAK 494
R L++++FT+ PG+ +A+VG SGAGK+T+LRL+ Y +SG I +
Sbjct: 272 RETLQDVSFTVMPGQTLALVGPSGAGKSTILRLLF--------RFYDISSGCIRI-DGQD 322
Query: 495 VSVLIPGEIEPEFG---------SETILEHV-YRKIRDLNAAVE-VLNRAGLSDAVL--- 540
+S + + G ++TI +++ Y ++ N VE AG+ DA++
Sbjct: 323 ISQVTQASLRSHIGVVPQDTVLFNDTIADNIRYGRVTAGNDEVEAAAQAAGIHDAIMAFP 382
Query: 541 --YRAKFSE----LSTGQKERAKIASLLAERPNVLLIDEFAAHLDTLTAMRVARKVSEIV 594
YR + E LS G+K+R IA + + P ++L+DE + LDT + ++++
Sbjct: 383 EGYRTQVGERGLKLSGGEKQRVAIARTILKAPGIILLDEATSALDTSNERAIQASLAKVC 442
Query: 595 REAGITAVIITHRPEVVKALDPDKVLFVGYGTVIVR 630
A T +++ HR V ++ D++L + G ++ R
Sbjct: 443 --ANRTTIVVAHRLSTV--VNADQILVIKDGCIVER 474
>gb|AAG33617.1|AF308472_1 (AF308472) ATP-binding cassette half-transporter [Homo sapiens]
Length = 896
Score = 80.0 bits (194), Expect = 7e-14
Identities = 60/216 (27%), Positives = 110/216 (50%), Gaps = 33/216 (15%)
Query: 435 RPVLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGYWEEKYRPTSGKIEVPKNAK 494
R L++++FT+ PG+ +A+VG SGAGK+T+LRL+ Y +SG I +
Sbjct: 657 RETLQDVSFTVMPGQTLALVGPSGAGKSTILRLLF--------RFYDISSGCIRI-DGQD 707
Query: 495 VSVLIPGEIEPEFG---------SETILEHV-YRKIRDLNAAVE-VLNRAGLSDAVL--- 540
+S + + G ++TI +++ Y ++ N VE AG+ DA++
Sbjct: 708 ISQVTQASLRSHIGVVPQDTVLFNDTIADNIRYGRVTAGNDEVEAAAQAAGIHDAIMAFP 767
Query: 541 --YRAKFSE----LSTGQKERAKIASLLAERPNVLLIDEFAAHLDTLTAMRVARKVSEIV 594
YR + E LS G+K+R IA + + P ++L+DE + LDT + ++++
Sbjct: 768 EGYRTQVGERGLKLSGGEKQRVAIARTILKAPGIILLDEATSALDTSNERAIQASLAKVC 827
Query: 595 REAGITAVIITHRPEVVKALDPDKVLFVGYGTVIVR 630
A T +++ HR V ++ D++L + G ++ R
Sbjct: 828 --ANRTTIVVAHRLSTV--VNADQILVIKDGCIVER 859
>gb|AAA88774.1| (U47048) MtfB [Escherichia coli]
Length = 707
Score = 79.6 bits (193), Expect = 1e-13
Identities = 67/224 (29%), Positives = 106/224 (46%), Gaps = 35/224 (15%)
Query: 411 DIKGLPQEIQDLLKAFGVRHRVIQRPVLRNLNFTINPGEVVAVVGASGAGKTTLLRLILG 470
D+ + E QDL R+ PV NLN +I PGE VA+ GASG+GKTTL++++ G
Sbjct: 489 DMYPVALETQDL----SFRYDSQSAPVFSNLNISIKPGESVAITGASGSGKTTLMKVLCG 544
Query: 471 AIKGYWEEKYRPTSGKIEVP--------KNAKVSVLIPGEIEPEFGSETILEHVYRKIRD 522
+ P SG++ + N ++ + S +I E++ +
Sbjct: 545 LLV--------PESGRVMIDGTDIRSLGVNNYHKIISCVMQDDRLFSGSIRENICGFTEN 596
Query: 523 LNAA--VEVLNRAGLSDAVL-----YRAKFSE----LSTGQKERAKIASLLAERPNVLLI 571
++ A VE + + D ++ Y E LS GQK+R IA L RP +L +
Sbjct: 597 IDEAWMVECARASFIHDVIIKMPMGYDTLIGELGEGLSGGQKQRIFIARALYRRPGILFM 656
Query: 572 DEFAAHLDTLTAMRVARKVSEIVREAGITAVIITHRPEVVKALD 615
DE + LDT + V++ +++ IT +II HR VK+ D
Sbjct: 657 DEATSALDTESEY----YVNQAIKQLNITRIIIAHRETTVKSAD 696
>pir||H72704 probable iron (III) dicitrate transport ATP-binding protein APE1055
- Aeropyrum pernix (strain K1)
>gi|5104725|dbj|BAA80040.1| (AP000060) 250aa long
hypothetical iron (III) dicitrate transport ATP-binding
protein [Aeropyrum pernix]
Length = 250
Score = 79.6 bits (193), Expect = 1e-13
Identities = 62/201 (30%), Positives = 96/201 (46%), Gaps = 39/201 (19%)
Query: 436 PVLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGYWEEKYRPTSGKIEVPKNAKV 495
PVLR ++F+++PG +VA++G +G+GKTTLLRL+ G IK P+ G++EV +
Sbjct: 21 PVLRGVSFSLDPGSLVALLGPNGSGKTTLLRLLAGIIK--------PSRGRVEVCGSP-- 70
Query: 496 SVLIPGEIEPEFGSETILEHVYRKIRDLNAAVEVLNRAGLSDAV---------------- 539
PG + G V +++ + A +L R G+S+ V
Sbjct: 71 ----PGRVRRMLGYAPASPEVDPRLKAVEVA--LLYRYGVSEGVAWGRRDWEEVLAALGE 124
Query: 540 -----LYRAKFSELSTGQKERAKIASLLAERPNVLLIDEFAAHLDTLTAMRVARKVSEIV 594
L ++ ELS+GQ+ +A +LA RP + L+DE + LD RV + +
Sbjct: 125 MGVGELAWRRWGELSSGQRRLVILAGVLARRPGLALLDEPHSFLDVSNMRRVTLVLRSLR 184
Query: 595 REAGITAVIITHRPEVVKALD 615
A T V TH P A D
Sbjct: 185 GRA--TIVYTTHDPLAAMAAD 203
>pir||H70432 ABC transporter - Aquifex aeolicus >gi|2983897|gb|AAC07448.1|
(AE000744) ABC transporter [Aquifex aeolicus]
Length = 247
Score = 79.2 bits (192), Expect = 1e-13
Identities = 64/214 (29%), Positives = 104/214 (47%), Gaps = 34/214 (15%)
Query: 437 VLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGYWEEKYRPTSGKIEV----PKN 492
V + ++F + ++VA+VG SGAGKTTLLRLILG +K P G++ + KN
Sbjct: 17 VHKGISFKVESSQIVAIVGGSGAGKTTLLRLILGLLK--------PLKGEVRLFGKSIKN 68
Query: 493 AKVSVL--------IPGEIEPEFGSETILEHVY----------RKIRDLNAAVEVLNRAG 534
L + + FGS T+LE+V R I ++NA + L+ G
Sbjct: 69 LSEEELQKLRDRMGVVFQFSALFGSMTVLENVMYPVIKKRKLDRSIVEMNACFK-LSVCG 127
Query: 535 LSDAVLYRAKFSELSTGQKERAKIASLLAERPNVLLIDEFAAHLDTLTAMRVARKVSEIV 594
L Y+ ELS G K++ +A L+ P +L++DE + LD ++A + +
Sbjct: 128 LKPEDFYKYP-QELSGGMKKKTALARALSLDPELLILDEPTSGLDPISAEEFDNLIKTVR 186
Query: 595 REAGITAVIITHRPEVVKALDPDKVLFVGYGTVI 628
G T +++TH ++ DKVL + G ++
Sbjct: 187 DTFGTTVIMVTHDLPSLRIC--DKVLALREGKIV 218
>pir||D75609 amino acid ABC transporter, ATP-binding protein - Deinococcus
radiodurans (strain R1)
>gi|6460517|gb|AAF12223.1|AE001862_49 (AE001862) amino
acid ABC transporter, ATP-binding protein [Deinococcus
radiodurans]
Length = 309
Score = 79.2 bits (192), Expect = 1e-13
Identities = 73/231 (31%), Positives = 108/231 (46%), Gaps = 40/231 (17%)
Query: 418 EIQDLLKAFGVRHRVIQRPVLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGYWE 477
E Q+++K+FG VL++++ T+ GE+V ++G SG GK+TLLRL+
Sbjct: 3 EFQNVIKSFG------GPAVLQDISLTVPTGELVILIGPSGCGKSTLLRLV--------N 48
Query: 478 EKYRPTSGKIEVPKNAKVSVLIPGEIEPE------------FGSETILEHVY-------- 517
PTSG I V VSVL + F T+ E+V
Sbjct: 49 RLLEPTSGDIRV---GGVSVLEQDPVALRRRLGYVIQSVGLFPHLTVQENVELVPSISGV 105
Query: 518 -RKIRDLNAAVEVLNRAGLSDAVLYRAKFSELSTGQKERAKIASLLAERPNVLLIDEFAA 576
R+ R A+E+L+ GL +LS GQ++R IA LA P LL+DE +
Sbjct: 106 GRETRAAR-ALELLSLMGLEPGQYAGRYPRQLSGGQQQRVGIARALAADPEYLLMDEPFS 164
Query: 577 HLDTLTAMRVARKVSEIVREAGITAVIITHRPEVVKALDPDKVLFVGYGTV 627
LD +T R+ + + RE G T V +TH + L D++ +G GTV
Sbjct: 165 ALDPITRARLQEQFLTLKREIGKTIVFVTHDVDEAVRLG-DRICVLGNGTV 214
>gb|AAF61810.1| (AF129811) unknown [Moraxella catarrhalis]
Length = 690
Score = 78.8 bits (191), Expect = 2e-13
Identities = 61/197 (30%), Positives = 99/197 (49%), Gaps = 31/197 (15%)
Query: 437 VLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGYWEEKYRPTSGKIEV------- 489
++ NL+F I E VA+VGA+G GK+TL+ L++G + P SG I++
Sbjct: 503 IIDNLSFHIKDKESVAIVGATGCGKSTLMSLLMGEL--------TPKSGDIKIAGKIHHS 554
Query: 490 --PKNAKVSVLIPGEIEPEFGSETILEHVYRKIRDLNAAVE-VLNRAGLSDAVL-----Y 541
NA+ + + + F I + + N VE AG+ D ++ Y
Sbjct: 555 MAELNARGIIASVNQDDTLFAGSLIENISFFDDKIDNEWVEQCAIMAGIHDEIMAMPMGY 614
Query: 542 RAKFSE----LSTGQKERAKIASLLAERPNVLLIDEFAAHLDTLTAMRVARKVSEIVREA 597
+ + LS GQK+R IA L RP +L +DE +HLD ++ +++E+++
Sbjct: 615 QTLVGDMGNVLSGGQKQRIFIARALYRRPKILFLDEATSHLD----VKKEYQINEMIKSL 670
Query: 598 GITAVIITHRPEVVKAL 614
GIT V+I HRPE ++AL
Sbjct: 671 GITRVMIAHRPERLRAL 687
>sp|P73450|NRTC_SYNY3 NITRATE TRANSPORT ATP-BINDING PROTEIN NRTC >gi|7445984|pir||S77387
nitrate transport protein C-2 - Synechocystis sp.
(strain PCC 6803) >gi|1652569|dbj|BAA17490.1| (D90906)
nitrate transport protein NrtC [Synechocystis sp.]
Length = 670
Score = 78.8 bits (191), Expect = 2e-13
Identities = 61/199 (30%), Positives = 98/199 (48%), Gaps = 19/199 (9%)
Query: 438 LRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGYW-------EEKYRPTSGKIEVP 490
L+N+ I+ GE ++++G SG GK+TLL +I G K + +E P ++ V
Sbjct: 25 LKNIELKISQGEFISLIGHSGCGKSTLLNMISGLDKPTFGGVIMEGKEITEPGPERMVVF 84
Query: 491 KNAKVSVLIPGEIEPEFGSETILEHVYR----KIRDLNAAVEVLNRAGLSDAVLYRAKFS 546
+N + + +L + + KI D N A+ L RA +
Sbjct: 85 QNYSLLPWLTVRQNIALAVNRVLRDLPKPEQEKIIDDNIALVGLQRAA-------HKRPG 137
Query: 547 ELSTGQKERAKIASLLAERPNVLLIDEFAAHLDTLTAMRVARKVSEIVREAGITAVIITH 606
ELS G K+R IA L+ RP VLL+DE LD LT + ++ EIV+E+G+T +++TH
Sbjct: 138 ELSGGMKQRVAIARALSTRPKVLLLDEPFGALDALTRGNLQERLMEIVQESGVTCIMVTH 197
Query: 607 RPEVVKALDPDKVLFVGYG 625
+ L D+V+ + G
Sbjct: 198 DVDEALLLS-DRVVMLTTG 215
>pir||T37701 probable abc transporter - fission yeast (Schizosaccharomyces
pombe) (fragment) >gi|2239178|emb|CAB10098.1| (Z97208)
putative abc transporter [Schizosaccharomyces pombe]
Length = 467
Score = 78.8 bits (191), Expect = 2e-13
Identities = 64/218 (29%), Positives = 105/218 (47%), Gaps = 31/218 (14%)
Query: 435 RPVLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGYWEEKYRPTSGKIEVPKNAK 494
RP+L +F I G VA VGASG GK+T+LRL+ Y SGKI + N +
Sbjct: 230 RPILNGCSFNIPAGAKVAFVGASGCGKSTILRLLF--------RFYDTDSGKILID-NQR 280
Query: 495 VSVLIPGEIEPEFG---------SETILEHV-YRKIRDLN-AAVEVLNRAGLSDAVL--- 540
+ + + G ++TIL ++ Y + N VE +A + D +
Sbjct: 281 LDQITLNSLRKAIGVVPQDTPLFNDTILYNIGYGNPKASNDEIVEAAKKAKIHDIIESFP 340
Query: 541 --YRAKFSE----LSTGQKERAKIASLLAERPNVLLIDEFAAHLDTLTAMRVARKVSEIV 594
Y+ K E +S G+K+R ++ LL + P +L DE + LDT T + R +++++
Sbjct: 341 EGYQTKVGERGLMISGGEKQRLAVSRLLLKNPEILFFDEATSALDTNTERALLRNINDLI 400
Query: 595 REAGITAVIITHRPEVVKALDPDKVLFVGYGTVIVRKS 632
+ + T+V I HR +K D D + + G V+ + S
Sbjct: 401 KGSHKTSVFIAHRLRTIK--DCDIIFVLEKGRVVEQGS 436
>pir||E71130 probable oligopeptide transport ATP-binding protein APPD -
Pyrococcus horikoshii >gi|3257220|dbj|BAA29903.1|
(AP000003) 327aa long hypothetical oligopeptide
transport ATP-binding protein APPD [Pyrococcus
horikoshii]
Length = 327
Score = 78.8 bits (191), Expect = 2e-13
Identities = 67/233 (28%), Positives = 111/233 (46%), Gaps = 34/233 (14%)
Query: 418 EIQDLLKAFGVRHRVIQRPVLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGYWE 477
EI+ L + R+ + L N++F++ G +V ++G SG+GK+TL IL +
Sbjct: 6 EIEGLTVKYKTRYGTVH--ALSNVSFSVKKGSIVGIIGESGSGKSTLGHTILRTLP---- 59
Query: 478 EKYRPTSGKI--------EVPKNA--------KVSVLIPGEIE---PEFGSETILEHVYR 518
E R SGKI E+ + K+S++ + P + L V R
Sbjct: 60 ENARIESGKIMFEGSDLLEIDEEVFRREFRWKKISMIFQNSMNAFSPVHRIQDQLLDVAR 119
Query: 519 KI---RDLNAAVEVLNR----AGLSDAVLYRAKFSELSTGQKERAKIASLLAERPNVLLI 571
K + N +E++ A + ++VL + ELS GQ++R I L P +++
Sbjct: 120 KCFPNKSRNELLEIIKEKLRIANIDESVLKKYPH-ELSGGQRQRVAIGMALLADPEIVIA 178
Query: 572 DEFAAHLDTLTAMRVARKVSEIVREAGITAVIITHRPEVVKALDPD-KVLFVG 623
DE LD +T ++ ++ EI ++ GIT ++ITH VV AL D VL+ G
Sbjct: 179 DEPTTGLDVVTQYQILNRLKEIQKDLGITLLLITHDVSVVAALSTDVLVLYAG 231
>gb|AAF23272.1|AF101263_2 (AF121672) ABC transporter MreA [Staphylococcus aureus]
Length = 261
Score = 78.8 bits (191), Expect = 2e-13
Identities = 62/190 (32%), Positives = 94/190 (48%), Gaps = 16/190 (8%)
Query: 435 RPVLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIK--------GYWEEKYRPTSGK 486
+ VL N+N IN GE +A+VG +GAGK+TLL+LILG + G + K + TS K
Sbjct: 23 KKVLENINIKINKGEFLAIVGPNGAGKSTLLKLILGLLPLQSGEIFVGGIDFKNKKTSIK 82
Query: 487 ---IEVPKNAKVSVLIPGEIEPEFGSETILEHVYRKI--RDLNAAVEVLNRAGLSDAVLY 541
+ NA S E T + +++ +D ++VL R +SD L
Sbjct: 83 LSYVSQKANAFNSGFPASVKEVVLSGLTKTKRLFQTFNSKDNEKVIKVLERLNISD--LI 140
Query: 542 RAKFSELSTGQKERAKIASLLAERPNVLLIDEFAAHLDTLTAMRVARKVSEIVREAGITA 601
+ELS GQ++R IA L P VL++DE +D + ++ +E GIT
Sbjct: 141 HKNIAELSGGQQQRVMIARALISEPAVLVLDEPTNGIDAKHVSEFYNTLDQLKQE-GITI 199
Query: 602 VIITHRPEVV 611
+++TH VV
Sbjct: 200 ILVTHDIGVV 209
>emb|CAB65561.1| (AL136058) probable amino acid ABC transporter protein, ATP-binding
component. [Streptomyces coelicolor A3(2)]
Length = 261
Score = 78.8 bits (191), Expect = 2e-13
Identities = 69/221 (31%), Positives = 107/221 (48%), Gaps = 16/221 (7%)
Query: 421 DLLKAFGVRHRVIQRPVLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGYWEEKY 480
+L++ V R VL +L+F+++ G+ V ++G SG+GKTT+LRL++ +K +E
Sbjct: 19 ELIRLEQVTKRFGDNTVLDHLDFSVDAGKHVTLIGPSGSGKTTILRLLMTLLKP--DEGT 76
Query: 481 RPTSGKIEVPKNAKVSVLIPGEIEPEFGSETILEH--VYRKIRDLNAAV------EVLNR 532
G+ P K + +I F + + V R I + V E + R
Sbjct: 77 ITVDGQKLFPATEKERREVRKQIGMVFQQFNLFPNMSVLRNITEAPVTVLGMPKDEAVER 136
Query: 533 A-GLSDAVLYR----AKFSELSTGQKERAKIASLLAERPNVLLIDEFAAHLDTLTAMRVA 587
A GL D V A+ ++LS GQ++R IA LA RP VLL+DE + LD V
Sbjct: 137 AKGLLDMVGLADKCDARPAQLSGGQQQRVAIARALAMRPKVLLLDEVTSALDPELVAGVL 196
Query: 588 RKVSEIVREAGITAVIITHRPEVVKALDPDKVLFVGYGTVI 628
+ +I R IT + +TH + + D+VL G VI
Sbjct: 197 DLLRDIARSTDITMLCVTHEMNFARDIS-DQVLMFDSGRVI 236
>gb|AAF99566.1| (AF167161) unknown [Staphylococcus aureus]
Length = 309
Score = 78.8 bits (191), Expect = 2e-13
Identities = 63/218 (28%), Positives = 103/218 (46%), Gaps = 18/218 (8%)
Query: 418 EIQDLLKAFGVRHRVIQRPVLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIK---- 473
EI +L K +G + V NL+ T+ G++ +G +GAGKTT +R++LG IK
Sbjct: 9 EINNLTKQYGSQIAV------NNLSITVESGQIYGFLGRNGAGKTTTIRMLLGLIKPTKG 62
Query: 474 --GYWEEKYRPTSGKIEVPKNAKVSVLIPGEIEPEFGSETI-LEHVYRKIRDLNAAVEVL 530
+E+++ S K E+ KN V PG E + + I+ NA EVL
Sbjct: 63 NIKIFEKEFE--SNKTEILKNIGAMVETPGFYSNLTAKENLTINAKILGIQKENAIEEVL 120
Query: 531 NRAGLSDAVLYRAKFSELSTGQKERAKIASLLAERPNVLLIDEFAAHLDTLTAMRVARKV 590
GL+ + F S G K+R IA L P +L++DE LD + + + +
Sbjct: 121 EIVGLASEKV--KLFKNYSLGMKQRLGIARALLHNPELLILDEPTNGLDPIGIKEIRKLI 178
Query: 591 SEIVREAGITAVIITHRPEVVKALDPDKVLFVGYGTVI 628
++ + IT +I +H ++ L DKV + G ++
Sbjct: 179 KDLAQSRNITILISSHILSEIEQL-VDKVGIIHNGVLL 215
>sp|O14286|YETI_SCHPO PUTATIVE ABC TRANSPORTER C8C9.18 IN CHROMOSOME I
>gi|11359219|pir||T39154 probable ABC transporter -
fission yeast (Schizosaccharomyces pombe)
Length = 693
Score = 78.8 bits (191), Expect = 2e-13
Identities = 64/218 (29%), Positives = 105/218 (47%), Gaps = 31/218 (14%)
Query: 435 RPVLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGYWEEKYRPTSGKIEVPKNAK 494
RP+L +F I G VA VGASG GK+T+LRL+ Y SGKI + N +
Sbjct: 456 RPILNGCSFNIPAGAKVAFVGASGCGKSTILRLLF--------RFYDTDSGKILID-NQR 506
Query: 495 VSVLIPGEIEPEFG---------SETILEHV-YRKIRDLN-AAVEVLNRAGLSDAVL--- 540
+ + + G ++TIL ++ Y + N VE +A + D +
Sbjct: 507 LDQITLNSLRKAIGVVPQDTPLFNDTILYNIGYGNPKASNDEIVEAAKKAKIHDIIESFP 566
Query: 541 --YRAKFSE----LSTGQKERAKIASLLAERPNVLLIDEFAAHLDTLTAMRVARKVSEIV 594
Y+ K E +S G+K+R ++ LL + P +L DE + LDT T + R +++++
Sbjct: 567 EGYQTKVGERGLMISGGEKQRLAVSRLLLKNPEILFFDEATSALDTNTERALLRNINDLI 626
Query: 595 REAGITAVIITHRPEVVKALDPDKVLFVGYGTVIVRKS 632
+ + T+V I HR +K D D + + G V+ + S
Sbjct: 627 KGSHKTSVFIAHRLRTIK--DCDIIFVLEKGRVVEQGS 662
>pir||E82539 ABC transporter ATP-binding protein XF2582 [imported] - Xylella
fastidiosa (strain 9a5c)
>gi|9107799|gb|AAF85379.1|AE004065_4 (AE004065) ABC
transporter ATP-binding protein [Xylella fastidiosa]
Length = 564
Score = 78.4 bits (190), Expect = 2e-13
Identities = 66/239 (27%), Positives = 115/239 (47%), Gaps = 36/239 (15%)
Query: 415 LPQEIQDLLKAFGVRHRVIQRP---VLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGA 471
LPQ ++ ++ V QRP L +++ I PGE +A VG SGAGK+TLL L+L
Sbjct: 316 LPQPLRGEIRFERVGFHYPQRPETPALDDIDLHIRPGETIAFVGPSGAGKSTLLSLLL-- 373
Query: 472 IKGYWEEKYRPTSGKIEV---------PKNAKVSVLIPGEIEPEFGSETILEHV-YRKIR 521
Y PT G+I + PK + + + + +P + + +E++ Y ++
Sbjct: 374 ------RFYDPTHGRILIDGVDLRQTDPKVLRTHIALVQQ-QPTLFTASAMENIRYGRLD 426
Query: 522 DLNAAVEVLNRAGLSDAVL------YRAKFSE----LSTGQKERAKIASLLAERPNVLLI 571
A +E+ +R+ +D + Y + E LS GQ++R IA L + +LL+
Sbjct: 427 ATTAEIEIASRSSEADGFIRALPQSYATELGEHGMSLSGGQQQRIAIARALLKEAPILLL 486
Query: 572 DEFAAHLDTLTAMRVARKVSEIVREAGITAVIITHRPEVVKALDPDKVLFVGYGTVIVR 630
DE LD V + + ++ G T +II HR +V L D+++ + G ++ +
Sbjct: 487 DEATNALDAQNEQAVQQALERLM--TGRTTLIIAHR--LVTILKADRIVVMDQGRIVAQ 541
>pir||D69180 ABC transporter - Methanobacterium thermoautotrophicum (strain
Delta H) >gi|2621685|gb|AAB85111.1| (AE000842) ABC
transporter [Methanobacterium thermoautotrophicum]
Length = 250
Score = 78.4 bits (190), Expect = 2e-13
Identities = 63/188 (33%), Positives = 96/188 (50%), Gaps = 29/188 (15%)
Query: 435 RPVLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGYWEEKYRPTSGKIEV----P 490
R +LRN+N + GE++AV+G +G GKTTLLRLI G IK PT G + V P
Sbjct: 18 REILRNINLKVPMGELLAVIGPNGGGKTTLLRLITGQIK--------PTRGTVRVLGMKP 69
Query: 491 KNAKVSV-LIP--GEIEPEFG---SETILEHVYRKIR-----DLNAAVEVLNRAGLSDAV 539
++++ + +P E +F +T+L YR+ D A+ L G+ +
Sbjct: 70 EDSRSRIGYLPQRSHFETDFPINILQTVLIGTYRRFEAPTDDDRKKALRALKMVGMLE-- 127
Query: 540 LYR-AKFSELSTGQKERAKIASLLAERPNVLLIDEFAAHLDTLTAMRVARKVSEIVREAG 598
YR K ELS G+ +R +A L P++LL+DE A +D R + E+ E
Sbjct: 128 -YRDRKIGELSGGELQRVFLARALVREPDLLLLDEPTASVDPAFRGSFYRIIDELRDE-- 184
Query: 599 ITAVIITH 606
+T VI++H
Sbjct: 185 MTIVIVSH 192
>pir||H82381 toxin secretion ATP-binding protein VCA1084 [imported] - Vibrio
cholerae (group O1 strain N16961)
>gi|9658530|gb|AAF96977.1| (AE004433) toxin secretion
ATP-binding protein [Vibrio cholerae]
Length = 704
Score = 78.4 bits (190), Expect = 2e-13
Identities = 61/211 (28%), Positives = 109/211 (50%), Gaps = 33/211 (15%)
Query: 438 LRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGYWEEKYRPTSGKIEVPKNAKVSV 497
+R+L+ TI+PGE VA++G G+GKTTL RLI+G Y+PT G + + + +S
Sbjct: 486 VRDLSLTIHPGEKVAIIGRIGSGKTTLERLIMGL--------YKPTEGHVRI-DDTDISQ 536
Query: 498 LIPGEIEPEFG---SETILEH--------VYRKIRDLNAAVEVLNRAGLS-----DAVLY 541
L +I G +++L + + R + D ++ NRAG++ D
Sbjct: 537 LHHIDIRRNIGCVPQDSVLFYGSIRDNITLGRPLSDDREVMDAANRAGVTVFTQQDPAGL 596
Query: 542 RAKFSE----LSTGQKERAKIASLLAERPNVLLIDEFAAHLDTLTAMRVARKVSEIVREA 597
+ E LS GQ++ IA RP VLL+DE + +D + M + +++S++ +
Sbjct: 597 ERQVGEGGMLLSGGQRQSVSIARAFLGRPPVLLMDEPTSAMDNRSEMHIKQQLSQL--KP 654
Query: 598 GITAVIITHRPEVVKALDPDKVLFVGYGTVI 628
T ++ITH+ ++ + D+V+ + G +I
Sbjct: 655 SETLILITHKTSMLDVV--DRVIVMEKGCII 683
>emb|CAB65650.1| (AJ252160) putative ABC-transporter ATP-binding protein
[Alicyclobacillus acidocaldarius]
Length = 393
Score = 78.4 bits (190), Expect = 2e-13
Identities = 69/207 (33%), Positives = 107/207 (51%), Gaps = 30/207 (14%)
Query: 438 LRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGYWEEKYRPTSGKIEVPKNAKVSV 497
+R ++F I GE+V ++G SG+GKTT+LRLI G RPT G + + +V+
Sbjct: 19 VRGVSFQIREGEMVGLLGPSGSGKTTILRLIAGL--------ERPTKGDVWIG-GKRVTD 69
Query: 498 LIPGE--IEPEFGSETILEH--VYRKIR-----------DLNAAVEVLNRAGLSDAVLYR 542
L P + + F + + +H VY + +++A V L R ++ Y
Sbjct: 70 LPPQKRNVGLVFQNYALFQHMTVYDNVSFGLREKRVPKDEMDARVRELLRFMRLES--YA 127
Query: 543 AKFS-ELSTGQKERAKIASLLAERPNVLLIDEFAAHLDTLTAMRVARKVSEIVREAGITA 601
+F ELS GQ++R +A LA RP VLL DE A +DT + V ++ E G+T+
Sbjct: 128 NRFPHELSGGQQQRVALARALAPRPQVLLFDEPFAAIDTQIRRELRTFVRQVHDEMGVTS 187
Query: 602 VIITHRPEVVKALD-PDKVLFVGYGTV 627
V +TH E +AL+ D+VL + G V
Sbjct: 188 VFVTHDQE--EALEVADRVLVLHEGNV 212
>sp|P44531|AFUC_HAEIN PUTATIVE FERRIC TRANSPORT ATP-BINDING PROTEIN AFUC
>gi|1074273|pir||D64143 probable ABC-type transport
protein HI0126 - Haemophilus influenzae (strain Rd KW20)
>gi|1573081|gb|AAC21800.1| (U32698) ferric ABC
transporter, ATP-binding protein (afuC) [Haemophilus
influenzae Rd]
Length = 328
Score = 78.0 bits (189), Expect = 3e-13
Identities = 62/228 (27%), Positives = 111/228 (48%), Gaps = 38/228 (16%)
Query: 419 IQDLLKAFGVRHRVIQRPVLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGYWEE 478
++++ KAFG + V+ NL+ TI G +V ++G SG GKTT+LRL+ G
Sbjct: 9 LKNITKAFG------KAVVIDNLDLTIKRGTMVTLLGPSGCGKTTVLRLVAGL------- 55
Query: 479 KYRPTSGKIEVP-KNAKVSVLIPGEIEPEFGSETILEHVY-----------------RKI 520
PTSG+I + ++ S + +I F S + H+ +
Sbjct: 56 -ENPTSGQIFIDGEDVTKSSIQNRDICIVFQSYALFPHMSIGDNVGYGLKMQGIGKEERA 114
Query: 521 RDLNAAVEVLNRAGLSDAVLYRAKFSELSTGQKERAKIASLLAERPNVLLIDEFAAHLDT 580
+ + A+E+++ AG D + ++S GQ++R +A L +P VLL DE ++LD
Sbjct: 115 QRVKEALELVDLAGFEDRFV-----DQISGGQQQRVALARALVLKPKVLLFDEPLSNLDA 169
Query: 581 LTAMRVARKVSEIVREAGITAVIITHRPEVVKALDPDKVLFVGYGTVI 628
+ K+ E+ + GIT++ +TH A+ D+V+ + G ++
Sbjct: 170 NLRRSMREKIRELQQRLGITSLYVTHDQTEAFAVS-DEVIVMNKGKIM 216
>pir||B64856 probable ABC-type transport protein ycfV - Escherichia coli
>gi|1787361|gb|AAC74201.1| (AE000212) putative
ATP-binding component of a transport system [Escherichia
coli K12]
Length = 228
Score = 78.0 bits (189), Expect = 3e-13
Identities = 62/206 (30%), Positives = 103/206 (49%), Gaps = 37/206 (17%)
Query: 433 IQRPVLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGYWEEKYRPTSGKI--EVP 490
+Q VL N++F++ GE++A+VG+SG+GK+TLL L+ G PTSG +
Sbjct: 15 VQTDVLHNVSFSVGEGEMMAIVGSSGSGKSTLLHLLGGL--------DTPTSGDVIFNGQ 66
Query: 491 KNAKVSVLIPGEIE--------------PEFGSETILEHV-------YRKIRDLNA-AVE 528
+K+S E+ P+F T LE+V +K ++N+ A+E
Sbjct: 67 PMSKLSSAAKAELRNQKLGFIYQFHHLLPDF---TALENVAMPLLIGKKKPAEINSRALE 123
Query: 529 VLNRAGLSDAVLYRAKFSELSTGQKERAKIASLLAERPNVLLIDEFAAHLDTLTAMRVAR 588
+L GL +R SELS G+++R IA L P ++L DE +LD A + +
Sbjct: 124 MLKAVGLDHRANHRP--SELSGGERQRVAIARALVNNPRLVLADEPTGNLDARNADSIFQ 181
Query: 589 KVSEIVREAGITAVIITHRPEVVKAL 614
+ E+ R G +++TH ++ K +
Sbjct: 182 LLGELNRLQGTAFLVVTHDLQLAKRM 207
>pir||B70483 ABC transporter - Aquifex aeolicus >gi|2984332|gb|AAC07853.1|
(AE000774) ABC transporter [Aquifex aeolicus]
Length = 253
Score = 78.0 bits (189), Expect = 3e-13
Identities = 61/216 (28%), Positives = 113/216 (52%), Gaps = 33/216 (15%)
Query: 435 RPVLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGYWEEKYRPTSGKIEV-PKNA 493
R +L+++NF++ GE+ +++G SG+GKT++ +LI+G ++PT GK+ V KN
Sbjct: 17 RVILKDVNFSVYKGEIFSIIGGSGSGKTSITKLIVGL--------WKPTKGKVLVFRKNV 68
Query: 494 -KVSVLIPGEIEPEFGS--------------ETI----LEHVYRKIRDLNA-AVEVLNRA 533
++S L E+ G E + LEH +L A+E L
Sbjct: 69 PELSGLELDELRKNIGYVFQEGALFDSYRVWENVVFYYLEHGKHNKEELRKMALENLKLV 128
Query: 534 GLSDAVLYRAKFSELSTGQKERAKIASLLAERPNVLLIDEFAAHLDTLTAMRVARKVSEI 593
+ ++VL SEL G ++R IA +A RP +++ DE + LD +T+ + + + E+
Sbjct: 129 NVDESVLDLYP-SELFGGMRKRVAIARAIATRPQLIIYDEPTSGLDPITSRVIDKLILEL 187
Query: 594 VREAGITAVIITHRPEVVKALD-PDKVLFVGYGTVI 628
+ G T++++TH +++ A D+V+ + G +I
Sbjct: 188 RNKTGTTSLVVTH--DMISAFTISDRVMVIKNGEII 221
>sp|P75957|YCFV_ECOLI HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PROTEIN YCFV
Length = 233
Score = 78.0 bits (189), Expect = 3e-13
Identities = 62/206 (30%), Positives = 103/206 (49%), Gaps = 37/206 (17%)
Query: 433 IQRPVLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGYWEEKYRPTSGKI--EVP 490
+Q VL N++F++ GE++A+VG+SG+GK+TLL L+ G PTSG +
Sbjct: 20 VQTDVLHNVSFSVGEGEMMAIVGSSGSGKSTLLHLLGGL--------DTPTSGDVIFNGQ 71
Query: 491 KNAKVSVLIPGEIE--------------PEFGSETILEHV-------YRKIRDLNA-AVE 528
+K+S E+ P+F T LE+V +K ++N+ A+E
Sbjct: 72 PMSKLSSAAKAELRNQKLGFIYQFHHLLPDF---TALENVAMPLLIGKKKPAEINSRALE 128
Query: 529 VLNRAGLSDAVLYRAKFSELSTGQKERAKIASLLAERPNVLLIDEFAAHLDTLTAMRVAR 588
+L GL +R SELS G+++R IA L P ++L DE +LD A + +
Sbjct: 129 MLKAVGLDHRANHRP--SELSGGERQRVAIARALVNNPRLVLADEPTGNLDARNADSIFQ 186
Query: 589 KVSEIVREAGITAVIITHRPEVVKAL 614
+ E+ R G +++TH ++ K +
Sbjct: 187 LLGELNRLQGTAFLVVTHDLQLAKRM 212
>pir||C82266 ABC transporter, ATP-binding protein VC0907 [imported] - Vibrio
cholerae (group O1 strain N16961)
>gi|9655363|gb|AAF94069.1| (AE004174) ABC transporter,
ATP-binding protein [Vibrio cholerae]
Length = 344
Score = 78.0 bits (189), Expect = 3e-13
Identities = 70/232 (30%), Positives = 110/232 (47%), Gaps = 35/232 (15%)
Query: 418 EIQDLLKAFGVRHRVIQRPVLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGYWE 477
EI+ + K F + I L+++N I G + V+G+SGAGK+TL+R +
Sbjct: 3 EIKSVNKVFYQGDKQIH--ALKDINLFIPQGTIFGVIGSSGAGKSTLIRCV--------N 52
Query: 478 EKYRPTSGKIEVPKNAKVSVLIP---------GEIEPEF---GSETILEHVYRKIRDLNA 525
+PTSG++ V ++ P G I F S T+ E+V +
Sbjct: 53 MLEKPTSGQVIVDGVDLTTLSNPQLCAARRNIGMIFQHFNLLSSRTVFENVALPLELAGQ 112
Query: 526 A--------VEVLNRAGLSDAVLYRAKF-SELSTGQKERAKIASLLAERPNVLLIDEFAA 576
+ E+L GLS+ R + + LS GQK+R IA LA P VLL DE +
Sbjct: 113 SQQHIETKVTELLALVGLSEK---RESYPANLSGGQKQRVAIARALASDPKVLLCDEATS 169
Query: 577 HLDTLTAMRVARKVSEIVREAGITAVIITHRPEVVKALDPDKVLFVGYGTVI 628
LD T + + EI R+ +T ++ITH +VVK++ +V +G G ++
Sbjct: 170 ALDPATTQSILELLKEINRQLNLTILLITHEMDVVKSI-CHEVAIIGGGELV 220
>dbj|BAA35937.1| (D90747) Heterocyst maturation protein (devA) homolog [Escherichia
coli]
Length = 263
Score = 78.0 bits (189), Expect = 3e-13
Identities = 62/206 (30%), Positives = 103/206 (49%), Gaps = 37/206 (17%)
Query: 433 IQRPVLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGYWEEKYRPTSGKI--EVP 490
+Q VL N++F++ GE++A+VG+SG+GK+TLL L+ G PTSG +
Sbjct: 50 VQTDVLHNVSFSVGEGEMMAIVGSSGSGKSTLLHLLGGL--------DTPTSGDVIFNGQ 101
Query: 491 KNAKVSVLIPGEIE--------------PEFGSETILEHV-------YRKIRDLNA-AVE 528
+K+S E+ P+F T LE+V +K ++N+ A+E
Sbjct: 102 PMSKLSSAAKAELRNQKLGFIYQFHHLLPDF---TALENVAMPLLIGKKKPAEINSRALE 158
Query: 529 VLNRAGLSDAVLYRAKFSELSTGQKERAKIASLLAERPNVLLIDEFAAHLDTLTAMRVAR 588
+L GL +R SELS G+++R IA L P ++L DE +LD A + +
Sbjct: 159 MLKAVGLDHRANHRP--SELSGGERQRVAIARALVNNPRLVLADEPTGNLDARNADSIFQ 216
Query: 589 KVSEIVREAGITAVIITHRPEVVKAL 614
+ E+ R G +++TH ++ K +
Sbjct: 217 LLGELNRLQGTAFLVVTHDLQLAKRM 242
>sp|Q02592|HMT1_SCHPO HEAVY METAL TOLERANCE PROTEIN PRECURSOR >gi|2370465|emb|CAB11609.1|
(Z98951) heavy metal tolerance protein precursor
[Schizosaccharomyces pombe]
Length = 830
Score = 77.6 bits (188), Expect = 4e-13
Identities = 69/285 (24%), Positives = 134/285 (46%), Gaps = 64/285 (22%)
Query: 365 EYLERYFKEDPYAPKEPLWKPSYGKVEMLEGPIVFKNVTKVFESELDIKGLPQEIQDLLK 424
E L F+E P + KP+ +++ +G ++F +V+ ++
Sbjct: 556 ERLLEIFEEKPTVVE----KPNAPDLKVTQGKVIFSHVSFAYDP---------------- 595
Query: 425 AFGVRHRVIQRPVLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGYWEEKYRPTS 484
++PVL ++NF PG+V+A+VG SG GK+T++R++L + S
Sbjct: 596 ---------RKPVLSDINFVAQPGKVIALVGESGGGKSTIMRILL--------RFFDVNS 638
Query: 485 GKIEVP----KNAKVSVL------IPGEIEPEFGSETILEHV-YRKIRDLNAAVEVLNRA 533
G I + +N +S L +P + ++TIL ++ Y K N + +A
Sbjct: 639 GSITIDDQDIRNVTLSSLRSSIGVVPQ--DSTLFNDTILYNIKYAKPSATNEEIYAAAKA 696
Query: 534 G-LSDAVL-----YRAKFSE----LSTGQKERAKIASLLAERPNVLLIDEFAAHLDTLTA 583
+ D +L Y ++ E LS G+K+R +A + + P+++L+DE + LDT T
Sbjct: 697 AQIHDRILQFPDGYNSRVGERGLKLSGGEKQRVAVARAILKDPSIILLDEATSALDTNTE 756
Query: 584 MRVARKVSEIVREAGITAVIITHRPEVVKALDPDKVLFVGYGTVI 628
++ ++ + +G TA++I HR + + D +L + G ++
Sbjct: 757 RQIQAALNRLA--SGRTAIVIAHRLSTI--TNADLILCISNGRIV 797
>pir||T41582 heavy metal tolerance protein precursor - fission yeast
(Schizosaccharomyces pombe) (fragment)
>gi|4239675|emb|CAA20865.1| (AL031546) heavy metal
tolerance protein precursor [Schizosaccharomyces pombe]
Length = 505
Score = 77.6 bits (188), Expect = 4e-13
Identities = 69/285 (24%), Positives = 134/285 (46%), Gaps = 64/285 (22%)
Query: 365 EYLERYFKEDPYAPKEPLWKPSYGKVEMLEGPIVFKNVTKVFESELDIKGLPQEIQDLLK 424
E L F+E P + KP+ +++ +G ++F +V+ ++
Sbjct: 231 ERLLEIFEEKPTVVE----KPNAPDLKVTQGKVIFSHVSFAYDP---------------- 270
Query: 425 AFGVRHRVIQRPVLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGYWEEKYRPTS 484
++PVL ++NF PG+V+A+VG SG GK+T++R++L + S
Sbjct: 271 ---------RKPVLSDINFVAQPGKVIALVGESGGGKSTIMRILL--------RFFDVNS 313
Query: 485 GKIEVP----KNAKVSVL------IPGEIEPEFGSETILEHV-YRKIRDLNAAVEVLNRA 533
G I + +N +S L +P + ++TIL ++ Y K N + +A
Sbjct: 314 GSITIDDQDIRNVTLSSLRSSIGVVPQ--DSTLFNDTILYNIKYAKPSATNEEIYAAAKA 371
Query: 534 G-LSDAVL-----YRAKFSE----LSTGQKERAKIASLLAERPNVLLIDEFAAHLDTLTA 583
+ D +L Y ++ E LS G+K+R +A + + P+++L+DE + LDT T
Sbjct: 372 AQIHDRILQFPDGYNSRVGERGLKLSGGEKQRVAVARAILKDPSIILLDEATSALDTNTE 431
Query: 584 MRVARKVSEIVREAGITAVIITHRPEVVKALDPDKVLFVGYGTVI 628
++ ++ + +G TA++I HR + + D +L + G ++
Sbjct: 432 RQIQAALNRLA--SGRTAIVIAHRLSTI--TNADLILCISNGRIV 472
>pir||A82184 ABC transporter, ATP-binding protein VC1568 [imported] - Vibrio
cholerae (group O1 strain N16961)
>gi|9656076|gb|AAF94722.1| (AE004234) ABC transporter,
ATP-binding protein [Vibrio cholerae]
Length = 233
Score = 77.6 bits (188), Expect = 4e-13
Identities = 59/209 (28%), Positives = 107/209 (50%), Gaps = 20/209 (9%)
Query: 418 EIQDLLKAFGVRHRVIQRPVLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGYWE 477
E+Q + K + V++ L ++ TI GE +A++G SG+GK+TL+ +LG +
Sbjct: 11 ELQQICKHYTSGQNVVK--ALDGVDLTIRHGEFLAILGPSGSGKSTLMN-VLGCLDKPTA 67
Query: 478 EKYRPTSGKIEVPKNAKVSVLIPGEIEPEFGSETILEH-----------VYRKIRDLNA- 525
+Y+ ++ +++ + +I F S +LE+ VY ++ +
Sbjct: 68 GRYQLDGHPVDSLSTQQLAAIRNQKIGFVFQSFNLLEYASALDNVALPLVYAGVKAKDRR 127
Query: 526 --AVEVLNRAGLSDAVLYRAKFSELSTGQKERAKIASLLAERPNVLLIDEFAAHLDTLTA 583
A E+L R GL+D + ++ ++LS GQK+R IA L +P +LL DE LD+ +
Sbjct: 128 RRATELLTRVGLADRLDHKP--NQLSGGQKQRVAIARALINQPQILLADEPTGALDSKSG 185
Query: 584 MRVARKVSEIVREAGITAVIITHRPEVVK 612
+ +E+ RE G T +++TH E+ K
Sbjct: 186 AEIEALFNELHRE-GRTIIVVTHDNELAK 213
>pir||S25198 vacuolar membrane protein HMT1 - fission yeast
(Schizosaccharomyces pombe) >gi|4972|emb|CAA78419.1|
(Z14055) HMT1 [Schizosaccharomyces pombe]
Length = 830
Score = 77.6 bits (188), Expect = 4e-13
Identities = 69/285 (24%), Positives = 134/285 (46%), Gaps = 64/285 (22%)
Query: 365 EYLERYFKEDPYAPKEPLWKPSYGKVEMLEGPIVFKNVTKVFESELDIKGLPQEIQDLLK 424
E L F+E P + KP+ +++ +G ++F +V+ ++
Sbjct: 556 ERLLEIFEEKPTVVE----KPNAPDLKVTQGKVIFSHVSFAYDP---------------- 595
Query: 425 AFGVRHRVIQRPVLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGYWEEKYRPTS 484
++PVL ++NF PG+V+A+VG SG GK+T++R++L + S
Sbjct: 596 ---------RKPVLSDINFVAQPGKVIALVGESGGGKSTIMRILL--------RFFDVNS 638
Query: 485 GKIEVP----KNAKVSVL------IPGEIEPEFGSETILEHV-YRKIRDLNAAVEVLNRA 533
G I + +N +S L +P + ++TIL ++ Y K N + +A
Sbjct: 639 GSITIDDQDIRNVTLSSLRSSIGVVPQ--DSTLFNDTILYNIKYAKPSATNEEIYAAAKA 696
Query: 534 G-LSDAVL-----YRAKFSE----LSTGQKERAKIASLLAERPNVLLIDEFAAHLDTLTA 583
+ D +L Y ++ E LS G+K+R +A + + P+++L+DE + LDT T
Sbjct: 697 AQIHDRILQFPDGYNSRVGERGLKLSGGEKQRVAVARAILKDPSIILLDEATSALDTNTE 756
Query: 584 MRVARKVSEIVREAGITAVIITHRPEVVKALDPDKVLFVGYGTVI 628
++ ++ + +G TA++I HR + + D +L + G ++
Sbjct: 757 RQIQAALNRLA--SGRTAIVIAHRLSTI--TNADLILCISNGRIV 797
>sp|Q06034|MDR1_LEIEN MULTIDRUG RESISTANCE PROTEIN 1 (P-GLYCOPROTEIN 1)
>gi|159370|gb|AAA16255.1| (L08091) multidrug resistance
protein [Leishmania enriettii]
Length = 1280
Score = 77.6 bits (188), Expect = 4e-13
Identities = 70/251 (27%), Positives = 121/251 (47%), Gaps = 39/251 (15%)
Query: 398 VFKNVTKVFESELDIKGLPQE-IQDLLKAFGVRHRVIQRP---VLRNLNFTINPGEVVAV 453
+FK + +V ++D G+P ++ ++ VR RP + R+L+ I G+ VA
Sbjct: 365 IFKAIDRVPPVDIDAGGVPVPGFKESIEFRNVRFAYPTRPGMILFRDLSLKIKCGQKVAF 424
Query: 454 VGASGAGKTTLLRLILGAIKGYWEEKYRPTSGKIEVP---------KNAKVSVLIPGEIE 504
GASG GK++++ LI + Y P G + V + + + I + E
Sbjct: 425 SGASGCGKSSVIGLI--------QRFYDPIGGAVLVDGVRMRELCLREWRDQIGIVSQ-E 475
Query: 505 PEFGSETILEHVYRKIRDLNAA----VEVLNRAGLSDAVL-----YRAKF----SELSTG 551
P + T++E+V ++ NA VE +A + D ++ Y S LS G
Sbjct: 476 PNLFAGTMMENV--RMGKPNATDEEVVEACRQANIHDTIMALPDRYDTPVGPVGSLLSGG 533
Query: 552 QKERAKIASLLAERPNVLLIDEFAAHLDTLTAMRVARKVSEIVREAGITAVIITHRPEVV 611
QK+R IA L +RP +LL+DE + LD + M V + ++++ G T V+I HR +
Sbjct: 534 QKQRIAIARALVKRPPILLLDEATSALDRKSEMEVQAALDQLIQRGGTTVVVIAHRLATI 593
Query: 612 KALDPDKVLFV 622
+ D D++ +V
Sbjct: 594 R--DMDRIYYV 602
>sp|Q57293|AFUC_ACTPL FERRIC TRANSPORT ATP-BINDING PROTEIN AFUC
>gi|1469284|gb|AAB05030.1| (U05042) afuC gene product
[Actinobacillus pleuropneumoniae]
>gi|1477453|gb|AAB17216.1| (U04954) afuC [Actinobacillus
pleuropneumoniae]
Length = 348
Score = 77.6 bits (188), Expect = 4e-13
Identities = 63/229 (27%), Positives = 114/229 (49%), Gaps = 40/229 (17%)
Query: 419 IQDLLKAFGVRHRVIQRPVLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGYWEE 478
++++ K+FG + V+ NL+ I G +V ++G SG GKTT+LRL+ G
Sbjct: 8 LKNITKSFG------KATVIDNLDLVIKRGTMVTLLGPSGCGKTTVLRLVAGL------- 54
Query: 479 KYRPTSGKIEVP-KNAKVSVLIPGEIEPEFGSETILEHVY------------------RK 519
PTSG+I + ++ S + +I F S + H+ RK
Sbjct: 55 -ENPTSGQIFIDGEDVTKSSIQNRDICIVFQSYALFPHMSIGDNVGYGLRMQGVSNEERK 113
Query: 520 IRDLNAAVEVLNRAGLSDAVLYRAKFSELSTGQKERAKIASLLAERPNVLLIDEFAAHLD 579
R + A+E+++ AG +D + ++S GQ++R +A L +P VL++DE ++LD
Sbjct: 114 QR-VKEALELVDLAGFADRFV-----DQISGGQQQRVALARALVLKPKVLILDEPLSNLD 167
Query: 580 TLTAMRVARKVSEIVREAGITAVIITHRPEVVKALDPDKVLFVGYGTVI 628
+ K+ E+ + GIT++ +TH A+ D+V+ + GT++
Sbjct: 168 ANLRRSMREKIRELQQRLGITSLYVTHDQTEAFAVS-DEVIVMNKGTIM 215
>sp|P75370|P29_MYCPN PROBABLE ABC TRANSPORTER ATP-BINDING PROTEIN P29
>gi|2146075|pir||S73750 ATP-binding protein P29 -
Mycoplasma pneumoniae (strain ATCC 29342)
>gi|1674109|gb|AAB96072.1| (AE000041) ATP-binding
protein P29 [Mycoplasma pneumoniae]
Length = 244
Score = 77.3 bits (187), Expect = 5e-13
Identities = 53/191 (27%), Positives = 87/191 (44%), Gaps = 19/191 (9%)
Query: 436 PVLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGA---IKG--YWEEKYRPTSGKIEVP 490
P+L N+NFTI+PGE + ++G SG GKT+LL I KG Y+ ++
Sbjct: 19 PLLENINFTISPGEHICLLGKSGVGKTSLLNCITNTKTISKGTIYFNGIASNNKDYKQLK 78
Query: 491 KNAKVSVLIPGEIEPEFGSETILEHVYRKIR------------DLNAAVEVLNRAGLSDA 538
K +P I+ +F + I ++ +++L L +
Sbjct: 79 KQFSFLDQVPNLIDTDFVYDAIWREAKNNLKWWQRLFLVEPQSLREQIIQILEEVNLKEY 138
Query: 539 VLYRAKFSELSTGQKERAKIASLLAERPNVLLIDEFAAHLDTLTAMRVARKVSEIVREAG 598
V Y K +LS GQK+R ++A L VLL+DE LD + A ++ + + R+
Sbjct: 139 VTYIIK--DLSGGQKQRVEVAKLFFANSQVLLVDEPTTGLDLINAHKIMELIIQFARQKA 196
Query: 599 ITAVIITHRPE 609
+T + +TH E
Sbjct: 197 MTLIFVTHDVE 207
>pir||D69068 methyl coenzyme M reductase system, component A2 homolog -
Methanobacterium thermoautotrophicum (strain Delta H)
>gi|2621192|gb|AAB84657.1| (AE000803) methyl coenzyme M
reductase system, component A2 homolog [Methanobacterium
thermoautotrophicum]
Length = 590
Score = 77.3 bits (187), Expect = 5e-13
Identities = 62/215 (28%), Positives = 106/215 (48%), Gaps = 28/215 (13%)
Query: 438 LRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGYWEEKYRPTSGKIEVPKN----A 493
L ++N + GE++ ++G SG+GKTTLLR++ G ++ + + +E + +
Sbjct: 44 LSDVNLEVAEGEILGILGMSGSGKTTLLRILRG-VEPFDSGRITLDDVTVEADSSQYYFS 102
Query: 494 KVSVLIPGEIEPEFG--SETILEHVYRKIRDLNA------------------AVEVLNRA 533
K+ ++ FG +ET LE+V RK+ A+E+L
Sbjct: 103 KLKKKTAIHLQRSFGLWAETALENVIRKLYATRYGDESMTDFDYASDEFGEDAMELLRVV 162
Query: 534 GLSDAVLYRAKFSELSTGQKERAKIASLLAERPNVLLIDEFAAHLDTLTAMRVARKVSEI 593
GL + A LS G+K+R +A LA++P VLL+DE A T + + I
Sbjct: 163 GLEHKADHFAPV--LSGGEKQRLIMARQLAKKPRVLLLDEPATMSCPRTKQEILDAIKNI 220
Query: 594 VREAGITAVIITHRPEVVKALDPDKVLFVGYGTVI 628
RE G+T V+++H PEV + L D+V+ + G ++
Sbjct: 221 NRELGVTVVLVSHLPEVHEYL-ADRVVLMDGGRIV 254
>pir||T36053 probable ABC-type transport protein cydCD - Streptomyces coelicolor
>gi|3928723|emb|CAA22219.1| (AL034355) putative ABC
transporter [Streptomyces coelicolor A3(2)]
Length = 1172
Score = 77.3 bits (187), Expect = 5e-13
Identities = 74/246 (30%), Positives = 113/246 (45%), Gaps = 36/246 (14%)
Query: 394 EGPIVFKNVTKVFESELDIKGL-PQEIQDLLKAFGVRHRVIQRP--VLRNLNFTINPGEV 450
EG +++ V E + G P L+ GV R R + N++FT+ PGE
Sbjct: 303 EGLAAAEDIFSVLERPVPASGTGPVPADHALRFEGVTVRYPGRAEAAVTNVDFTVEPGET 362
Query: 451 VAVVGASGAGKTTLLRLILGAIKGYWEEKYRPTSGKIEVPKNAKVSVLIPG--------E 502
VA+VG SGAGK+TLL +LG + PT G++ V S+ +
Sbjct: 363 VALVGPSGAGKSTLLNALLGFVP--------PTGGRVRVGGADLASLDVAQWHARVAWVP 414
Query: 503 IEPEFGSETILEH------------VYRKIRDLNAAVEVLNRAGLSDAVLYRAKFSELST 550
P + TI E+ V R +RD A+E ++ A + + LS
Sbjct: 415 QHPHLYAGTIAENVRLARPDADDTAVRRALRDA-GALEFVDALPEGTATVLGEDGTGLSA 473
Query: 551 GQKERAKIA-SLLAERPNVLLIDEFAAHLDTLTAMRVARKVSEIVREAGITAVIITHRPE 609
GQ++R +A + LA+RP VLL+DE A LD T V V + + G T +++ HRP
Sbjct: 474 GQRQRLALARAFLADRP-VLLLDEPTAALDGATEAEVVDAVRRLAQ--GRTVLLVVHRPA 530
Query: 610 VVKALD 615
+++ D
Sbjct: 531 LLEVAD 536
>dbj|BAB03891.1| (AP001507) amino acid ABC transporter (ATP-binding protein)
[Bacillus halodurans]
Length = 247
Score = 77.3 bits (187), Expect = 5e-13
Identities = 71/237 (29%), Positives = 113/237 (46%), Gaps = 44/237 (18%)
Query: 419 IQDLLKAFGVRHRVIQRPVLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGYWEE 478
+Q L K FG + VL+ L+ T+ G+VV V+G SG+GKTTLLR +
Sbjct: 4 VQSLYKKFG------EVEVLKGLDLTVERGKVVVVIGPSGSGKTTLLRCL--------NI 49
Query: 479 KYRPTSGKIEVPK-----NAKVSV-------LIPGEIEPE---FGSETILEHVYR----- 518
PTSG +++ + KVS + G + F T+L++V
Sbjct: 50 LETPTSGSVQIENQTLDFSGKVSSKEIANFRRLTGMVFQSYNLFPHMTVLQNVMEGPMTV 109
Query: 519 ----KIRDLNAAVEVLNRAGLSD-AVLYRAKFSELSTGQKERAKIASLLAERPNVLLIDE 573
K + A ++L + GL+D +Y +LS GQ++R IA LA P V+L DE
Sbjct: 110 KKEAKAQVEEKAKQLLAKVGLADKETVYP---FQLSGGQQQRVGIARALAMEPKVMLFDE 166
Query: 574 FAAHLDTLTAMRVARKVSEIVREAGITAVIITHRPEVVKALDPDKVLFVGYGTVIVR 630
+ LD V R + E+ E G+T +++TH + + D+V+F+ G ++ R
Sbjct: 167 PTSALDPELVGEVLRVMKELAEE-GMTMIVVTHEMRFAQEV-ADEVIFMDDGKIVER 221
>dbj|BAB11402.1| (AP002543) ABC transporter-like protein [Arabidopsis thaliana]
Length = 567
Score = 77.3 bits (187), Expect = 5e-13
Identities = 59/209 (28%), Positives = 107/209 (50%), Gaps = 14/209 (6%)
Query: 433 IQRPVLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIK-----GYWEEKYRPTSG-- 485
+++ +L ++ ++NPGEV+A++G SG+GKTTLL L+ G I G +P S
Sbjct: 51 VEKEILTGISGSVNPGEVLALMGPSGSGKTTLLSLLAGRISQSSTGGSVTYNDKPYSKYL 110
Query: 486 KIEVPKNAKVSVLIPGEIEPE---FGSETILEHVYRKIRDLNAAVEVLNRAGL---SDAV 539
K ++ + VL P E + + L + + A++V+ GL D +
Sbjct: 111 KSKIGFVTQDDVLFPHLTVKETLTYAARLRLPKTLTREQKKQRALDVIQELGLERCQDTM 170
Query: 540 LYRAKFSELSTGQKERAKIASLLAERPNVLLIDEFAAHLDTLTAMRVARKVSEIVREAGI 599
+ A +S G+++R I + + P++LL+DE + LD+ TA+R + +I EAG
Sbjct: 171 IGGAFVRGVSGGERKRVSIGNEIIINPSLLLLDEPTSGLDSTTALRTILMLHDIA-EAGK 229
Query: 600 TAVIITHRPEVVKALDPDKVLFVGYGTVI 628
T + H+P DK++ +G G+++
Sbjct: 230 TVITTIHQPSSRLFHRFDKLILLGRGSLL 258
>sp|P34712|MDR1_CAEEL MULTIDRUG RESISTANCE PROTEIN 1 (P-GLYCOPROTEIN A)
>gi|283551|pir||S27337 multidrug resistance protein A -
Caenorhabditis elegans >gi|6809|emb|CAA46190.1| (X65054)
P-glycoprotein A [Caenorhabditis elegans]
Length = 1321
Score = 76.9 bits (186), Expect = 6e-13
Identities = 73/270 (27%), Positives = 129/270 (47%), Gaps = 40/270 (14%)
Query: 385 PSYGKVEMLEGPIVFKNVTKVFESE-LDIKGLPQEIQDLLKAFGVRHRVIQRP---VLRN 440
P Y K G I+F + K+ + + L + G +++ + VR +RP +L+
Sbjct: 1039 PEYAKATFAGG-IIFGMLRKISKIDSLSLAGEKKKLYGKVIFKNVRFAYPERPEIEILKG 1097
Query: 441 LNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGYWEEKYRPTSGKIEV---------PK 491
L+F++ PG+ +A+VG SG GK+T++ L+ E Y G+I + P+
Sbjct: 1098 LSFSVEPGQTLALVGPSGCGKSTVVALL--------ERFYDTLGGEIFIDGSEIKTLNPE 1149
Query: 492 NAKVSVLIPGEIEPEFGSETILEHVYRKIRDLNAAV-EVLNRAGLSDAVLYRAKFSE--- 547
+ + + I + EP +I E++ + + + +V A L++ + A+ E
Sbjct: 1150 HTRSQIAIVSQ-EPTLFDCSIAENIIYGLDPSSVTMAQVEEAARLANIHNFIAELPEGFE 1208
Query: 548 ---------LSTGQKERAKIASLLAERPNVLLIDEFAAHLDTLTAMRVARKVSEIVREAG 598
LS GQK+R IA L P +LL+DE + LDT + +V ++ + RE G
Sbjct: 1209 TRVGDRGTQLSGGQKQRIAIARALVRNPKILLLDEATSALDT-ESEKVVQEALDRARE-G 1266
Query: 599 ITAVIITHRPEVVKALDPDKVLFVGYGTVI 628
T ++I HR V ++ D + V GT+I
Sbjct: 1267 RTCIVIAHRLNTV--MNADCIAVVSNGTII 1294
>pir||S25576 probable transport protein mt2 - rat >gi|407479|emb|CAA53054.1|
(X75306) TAP2 [Rattus norvegicus]
Length = 703
Score = 76.9 bits (186), Expect = 6e-13
Identities = 67/236 (28%), Positives = 115/236 (48%), Gaps = 38/236 (16%)
Query: 418 EIQDLLKAFGVRHRVIQRPVLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGYWE 477
E QD+ ++ R ++PVL+ L FT++PG+V A+VG +G+GK+T+ L+ +
Sbjct: 469 EFQDVSFSYPSRP---EKPVLQGLTFTLHPGKVTALVGPNGSGKSTVAALL--------Q 517
Query: 478 EKYRPTSGKIEVPKNAKV---------SVLIPGEIEPEFGSETILEHVYRKIRDL-NAAV 527
Y+PT GK+ + V V++ G+ EP S ++ +++ +RD +A V
Sbjct: 518 NLYQPTGGKVLLDGEPLVQYDHHYLHRQVVLVGQ-EPVLFSGSVKDNIAYGLRDCEDAQV 576
Query: 528 EVLNRAGLSDAVL----------YRAKFSELSTGQKERAKIASLLAERPNVLLIDEFAAH 577
+A +D + K S+L+ GQK+R IA L P VL++DE +
Sbjct: 577 MAAAQAACADDFIGEMTNGINTEIGEKGSQLAVGQKQRLAIARALVRNPRVLILDEATSA 636
Query: 578 LDTLTAMRVARKVSEIVREAGITAVIITHRPEVVKALDPDKVLFVGYGTVIVRKSL 633
LD + S+ R T ++I HR V+ + D+VL + G ++ L
Sbjct: 637 LDAECEQALQTWRSQEDR----TMLVIAHRLHTVQ--NADQVLVLKQGQLVEHDQL 686
>pir||S38402 probable transport protein mt2 - rat >gi|407481|emb|CAA53055.1|
(X75307) TAP2 [Rattus norvegicus]
Length = 703
Score = 76.9 bits (186), Expect = 6e-13
Identities = 67/236 (28%), Positives = 115/236 (48%), Gaps = 38/236 (16%)
Query: 418 EIQDLLKAFGVRHRVIQRPVLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGYWE 477
E QD+ ++ R ++PVL+ L FT++PG+V A+VG +G+GK+T+ L+ +
Sbjct: 469 EFQDVSFSYPSRP---EKPVLQGLTFTLHPGKVTALVGPNGSGKSTVAALL--------Q 517
Query: 478 EKYRPTSGKIEVPKNAKV---------SVLIPGEIEPEFGSETILEHVYRKIRDL-NAAV 527
Y+PT GK+ + V V++ G+ EP S ++ +++ +RD +A V
Sbjct: 518 NLYQPTGGKVLLDGEPLVQYDHHYLHRQVVLVGQ-EPVLFSGSVKDNIAYGLRDCEDAQV 576
Query: 528 EVLNRAGLSDAVL----------YRAKFSELSTGQKERAKIASLLAERPNVLLIDEFAAH 577
+A +D + K S+L+ GQK+R IA L P VL++DE +
Sbjct: 577 MAAAQAACADDFIGEMTNGINTEIGEKGSQLAVGQKQRLAIARALVRNPRVLILDEATSA 636
Query: 578 LDTLTAMRVARKVSEIVREAGITAVIITHRPEVVKALDPDKVLFVGYGTVIVRKSL 633
LD + S+ R T ++I HR V+ + D+VL + G ++ L
Sbjct: 637 LDAECEQALQTWRSQEDR----TMLVIAHRLHTVQ--NADQVLVLKQGQLVEHDQL 686
>sp|Q50294|Y179_MYCPN HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PROTEIN MG179 HOMOLOG
(GT9_ORF274) >gi|2127637|pir||S62815 sulfate transport
ATP-binding protein cysA - Mycoplasma pneumoniae (strain
ATCC 29342) >gi|2146659|pir||S73964 sulfate transport
ATP-binding protein cysA - Mycoplasma pneumoniae (SGC3)
(ATCC 29342) >gi|1215695|gb|AAC43688.1| (U34795) peptide
transport system protein SapF homolog; SapF homolog
[Mycoplasma pneumoniae] >gi|1674343|gb|AAB96286.1|
(AE000061) cobalt transport ATP-binding protein
[Mycoplasma pneumoniae]
Length = 274
Score = 76.9 bits (186), Expect = 6e-13
Identities = 66/226 (29%), Positives = 108/226 (47%), Gaps = 43/226 (19%)
Query: 427 GVRHRVIQRPVLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGYWEEKYRPTSGK 486
GV + P++RNL+F + GE V +VG +G+GK+T+ +L+ G +K P +G
Sbjct: 14 GVYFSYSELPLIRNLSFDVFEGEYVCIVGHNGSGKSTISKLLTGLLK--------PQAGT 65
Query: 487 IEV-----------------------PKNAKVSVLIPGEIEPEFGSETILEHVYRKIRDL 523
I++ P N + + + +I FG E Y + +
Sbjct: 66 IKIFGKTISSENVTYLRNHIGIIFQNPDNQFIGITVEDDI--AFGLE---NRRYTREKMK 120
Query: 524 NAAVEVLNRAGLSDAVLYRAKFSELSTGQKERAKIASLLAERPNVLLIDEFAAHLDTLTA 583
+ +V +AG+++ L + + LS GQK+R IAS+LA P +++ DE + LD A
Sbjct: 121 SIIEDVAQQAGITE--LLQKEPHNLSGGQKQRVAIASVLALNPAIIIFDESTSMLDP-KA 177
Query: 584 MRVARKVSEIVREAGITAVIITH-RPEVVKALDPDKVLFVGYGTVI 628
R ++ +R G + ITH EV KA DKVL + G +I
Sbjct: 178 KRTIKQFMVELRNQGKCVISITHDMEEVTKA---DKVLVMNEGRLI 220
>sp|Q9ZCM4|Y700_RICPR HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PROTEIN RP700
>gi|7445755|pir||F71676 glutamine transport ATP-binding
protein glnQ (glnQ1) RP700 - Rickettsia prowazekii
>gi|3861236|emb|CAA15136.1| (AJ235272) GLUTAMINE
TRANSPORT ATP-BINDING PROTEIN GLNQ (glnQ1) [Rickettsia
prowazekii]
Length = 221
Score = 76.9 bits (186), Expect = 6e-13
Identities = 62/195 (31%), Positives = 99/195 (49%), Gaps = 26/195 (13%)
Query: 437 VLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGYWEEKYRPTSGKIEVP-----K 491
VL LN T N GE++A++G+SG+GK+TLL I G + +PT+G++ +P K
Sbjct: 24 VLDGLNLTANEGELIAIIGSSGSGKSTLLH-IAGLLD-------KPTNGQVIIPNIKYKK 75
Query: 492 NAKVSVLIPGEIEPE---FGSETILEHVY--RKIRDLNA------AVEVLNRAGLSDAVL 540
+ + G I + T LE+V R IR L+ A ++L+ GL + L
Sbjct: 76 YHLIRLYYLGFIYQQHHLLKDFTALENVIIPRLIRGLDQKEAIKDATKILDDLGL-EKKL 134
Query: 541 YRAKFSELSTGQKERAKIASLLAERPNVLLIDEFAAHLDTLTAMRVARKVSEIVREAGIT 600
Y ELS G+++R IA L +P ++L DE +LD T V ++ R+ T
Sbjct: 135 YNMP-GELSGGEQQRVAIARSLINKPRIILADEPTGNLDPNTTNEVFNLFLKVARKQNTT 193
Query: 601 AVIITHRPEVVKALD 615
+++TH E+ +D
Sbjct: 194 VIMVTHNHELAHKMD 208
>pir||T18940 multidrug resistance protein homolog - Caenorhabditis elegans
>gi|3874031|emb|CAA94203.1| (Z70265) Similarity to
C.elegans p-glycoprotein (SW:MDR1_CAEEL), contains
similarity to Pfam domain: PF00005 (ABC transporter),
Score=418.0, E-value=2.8e-122, N=2; PF00664 (ABC
transporter transmembrane region.), Score=177.0,
E-value=9.8e-50, N=2~cDNA > >gi|3880013|emb|CAA94221.1|
(Z70268) Similarity to C.elegans p-glycoprotein
(SW:MDR1_CAEEL), contains similarity to Pfam domain:
PF00005 (ABC transporter), Score=418.0,
E-value=2.8e-122, N=2; PF00664 (ABC transporter
transmembrane region.), Score=177.0, E-value=9.8e-50,
N=2~cDNA >
Length = 1238
Score = 76.9 bits (186), Expect = 6e-13
Identities = 71/237 (29%), Positives = 115/237 (47%), Gaps = 46/237 (19%)
Query: 419 IQDLLKAFGVRHRVIQRP---VLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGY 475
IQ +L V+ RP +LR ++F + GE +A+VGASG+GK+T+++L+L
Sbjct: 376 IQGMLSFNNVKFAYPSRPDVDILRGISFDVKQGECIALVGASGSGKSTIVQLLL------ 429
Query: 476 WEEKYRPTSGKIEVP---------KNAKVSVLIPGEIEPEFGSETILEH----------- 515
Y SG I++ K + ++ + + EP + TI E+
Sbjct: 430 --HFYNIQSGTIKIGDSHLHDINLKQLRNAIGVVSQ-EPVLFNTTIEENIRFGNPNATSS 486
Query: 516 -VYRKIRDLNAAVEVLN-RAGLSDAVLYRAKFSELSTGQKERAKIASLLAERPNVLLIDE 573
+Y +R NA V N + GL V R ++LS GQK+R IA +L + P +LL+DE
Sbjct: 487 EIYEALRKANAYDFVCNIKDGLKTIVGERG--AQLSGGQKQRIAIARVLVKNPAILLLDE 544
Query: 574 FAAHLDTLTAMRV---ARKVSEIVREAGITAVIITHRPEVVKALDPDKVLFVGYGTV 627
+ LD+ + V +K SE G T +II HR ++ DK++ + G +
Sbjct: 545 ATSALDSASERAVQLALKKASE-----GRTTIIIAHRLSTIRHC--DKIMVMSNGKI 594
>pir||T23476 hypothetical protein K08E7.9 - Caenorhabditis elegans
>gi|3878418|emb|CAB01232.1| (Z77666) Similarity to
C.elegans multidrug resistance protein (SW:MDR1_CAEEL),
contains similarity to Pfam domain: PF00005 (ABC
transporter), Score=440.3, E-value=5.6e-129, N=2; PF00664
(ABC transporter transmembrane region.), Score=494.7,
E-value=2.2e>
Length = 1321
Score = 76.9 bits (186), Expect = 6e-13
Identities = 73/270 (27%), Positives = 129/270 (47%), Gaps = 40/270 (14%)
Query: 385 PSYGKVEMLEGPIVFKNVTKVFESE-LDIKGLPQEIQDLLKAFGVRHRVIQRP---VLRN 440
P Y K G I+F + K+ + + L + G +++ + VR +RP +L+
Sbjct: 1039 PEYAKATFAGG-IIFGMLRKISKIDSLSLAGEKKKLYGKVIFKNVRFAYPERPEIEILKG 1097
Query: 441 LNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGYWEEKYRPTSGKIEV---------PK 491
L+F++ PG+ +A+VG SG GK+T++ L+ E Y G+I + P+
Sbjct: 1098 LSFSVEPGQTLALVGPSGCGKSTVVALL--------ERFYDTLGGEIFIDGSEIKTLNPE 1149
Query: 492 NAKVSVLIPGEIEPEFGSETILEHVYRKIRDLNAAV-EVLNRAGLSDAVLYRAKFSE--- 547
+ + + I + EP +I E++ + + + +V A L++ + A+ E
Sbjct: 1150 HTRSQIAIVSQ-EPTLFDCSIAENIIYGLDPSSVTMAQVEEAARLANIHNFIAELPEGFE 1208
Query: 548 ---------LSTGQKERAKIASLLAERPNVLLIDEFAAHLDTLTAMRVARKVSEIVREAG 598
LS GQK+R IA L P +LL+DE + LDT + +V ++ + RE G
Sbjct: 1209 TRVGDRGTQLSGGQKQRIAIARALVRNPKILLLDEATSALDT-ESEKVVQEALDRARE-G 1266
Query: 599 ITAVIITHRPEVVKALDPDKVLFVGYGTVI 628
T ++I HR V ++ D + V GT+I
Sbjct: 1267 RTCIVIAHRLNTV--MNADCIAVVSNGTII 1294
>sp|Q00449|MDR4_DROME MULTIDRUG RESISTANCE PROTEIN HOMOLOG 49 (P-GLYCOPROTEIN 49)
>gi|103251|pir||A41249 multidrug resistance protein
homolog Mdr49 - fruit fly (Drosophila melanogaster)
>gi|157871|gb|AAA28679.1| (M59076) P glycoprotein
[Drosophila melanogaster]
Length = 1302
Score = 76.5 bits (185), Expect = 9e-13
Identities = 68/242 (28%), Positives = 114/242 (47%), Gaps = 37/242 (15%)
Query: 410 LDIKG-LPQEIQDLLKAFGVRHRVIQRP---VLRNLNFTINPGEVVAVVGASGAGKTTLL 465
+D KG P+ ++ G+R R RP +L+ L + PG+ VA VGASG GK+TL+
Sbjct: 388 MDEKGNRPENTAGHIRFEGIRFRYPARPDVEILKGLTVDVLPGQTVAFVGASGCGKSTLI 447
Query: 466 RLILGAIKGYWEEKYRPTSGKIEVPKN---------AKVSVLIPGEIEPEFGSETILEHV 516
+L+ + Y P +G +++ + + + G+ EP + TI E++
Sbjct: 448 QLM--------QRFYDPEAGSVKLDGRDLRTLNVGWLRSQIGVVGQ-EPVLFATTIGENI 498
Query: 517 -YRKIRDLNAAVEVLNRAGLSDAVLYRA----------KFSELSTGQKERAKIASLLAER 565
Y + A +E RA + R K +++S GQK+R IA L +
Sbjct: 499 RYGRPSATQADIEKAARAANCHDFITRLPKGYDTQVGEKGAQISGGQKQRIAIARALVRQ 558
Query: 566 PNVLLIDEFAAHLDTLTAMRVARKVSEIVREAGITAVIITHRPEVVKALDPDKVLFVGYG 625
P VLL+DE + LD + RV + + G T +++ HR + + DK++F+ G
Sbjct: 559 PQVLLLDEATSALDPTSEKRVQSALE--LASQGPTTLVVAHRLSTI--TNADKIVFLKDG 614
Query: 626 TV 627
V
Sbjct: 615 VV 616
Score = 74.9 bits (181), Expect = 3e-12
Identities = 74/266 (27%), Positives = 113/266 (41%), Gaps = 56/266 (21%)
Query: 371 FKEDPYAPKEPLWKPSYGKVEMLEGPIVFKNVTKVFESELDIKGLPQEIQDLLKAFGVRH 430
FK P P + Y VE EG IV++NV + + KG
Sbjct: 1035 FKRTSTQPNPP--QSPYNTVEKSEGDIVYENVGFEYPTR---KG---------------- 1073
Query: 431 RVIQRPVLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGYWEEKYRPTSGKI--- 487
P+L+ LN TI VA+VG SG+GK+T ++L+L Y P SG +
Sbjct: 1074 ----TPILQGLNLTIKKSTTVALVGPSGSGKSTCVQLLL--------RYYDPVSGSVNLS 1121
Query: 488 -----EVPKNAKVSVLIPGEIEPEFGSETILEHV-----YRKIRDLNAAVEVLNRAGLSD 537
E P + S L EP TI E++ +R + +E ++ + +
Sbjct: 1122 GVPSTEFPLDTLRSKLGLVSQEPVLFDRTIAENIAYGNNFRDDVSMQEIIEAAKKSNIHN 1181
Query: 538 AV--------LYRAKFSELSTGQKERAKIASLLAERPNVLLIDEFAAHLDTLTAMRVARK 589
+ K S+LS GQK+R IA L P +L++DE + LD L + +V ++
Sbjct: 1182 FISALPQGYDTRLGKTSQLSGGQKQRIAIARALVRNPKILILDEATSALD-LESEKVVQQ 1240
Query: 590 VSEIVREAGITAVIITHRPEVVKALD 615
+ R +G T + I HR V+ D
Sbjct: 1241 ALDEAR-SGRTCLTIAHRLTTVRNAD 1265
>sp|P31134|POTG_ECOLI PUTRESCINE TRANSPORT ATP-BINDING PROTEIN POTG
>gi|321862|pir||B45313 putrescine transport protein potG
- Escherichia coli >gi|147335|gb|AAA24410.1| (M93239)
nucleotide binding protein [Escherichia coli]
>gi|1651388|dbj|BAA35566.1| (D90723) Putrescine
transport protein PotG. [Escherichia coli]
>gi|1787079|gb|AAC73942.1| (AE000187) ATP-binding
component of putrescine transport system [Escherichia
coli K12]
Length = 404
Score = 76.5 bits (185), Expect = 9e-13
Identities = 60/206 (29%), Positives = 106/206 (51%), Gaps = 29/206 (14%)
Query: 418 EIQDLLKAFGVRHRVIQRPVLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGYWE 477
EI++L K++ +H V +++ TI GE+ A++GASG GK+TLLR++ G
Sbjct: 48 EIRNLTKSYDGQHAV------DDVSLTIYKGEIFALLGASGCGKSTLLRMLAGF------ 95
Query: 478 EKYRPTSGKIEVPKNAKVSVLIP--GEIEPEFGSETILEHV-------YRKIRDLNAAVE 528
+P++G+I + +S + P I F S + H+ + +D E
Sbjct: 96 --EQPSAGQIMLD-GVDLSQVPPYLRPINMMFQSYALFPHMTVEQNIAFGLKQDKLPKAE 152
Query: 529 VLNRAGLSDAVLYRAKFS-----ELSTGQKERAKIASLLAERPNVLLIDEFAAHLDTLTA 583
+ +R +++ +F+ +LS GQ++R +A LA+RP +LL+DE LD
Sbjct: 153 IASRVNEMLGLVHMQEFAKRKPHQLSGGQRQRVALARSLAKRPKLLLLDEPMGALDKKLR 212
Query: 584 MRVARKVSEIVREAGITAVIITHRPE 609
R+ +V +I+ G+T V++TH E
Sbjct: 213 DRMQLEVVDILERVGVTCVMVTHDQE 238
>pir||S75960 nitrate transport protein D-1 - Synechocystis sp. (strain PCC 6803)
>gi|1001320|dbj|BAA10807.1| (D64006) nitrate transport
protein NrtD [Synechocystis sp.]
Length = 282
Score = 76.5 bits (185), Expect = 9e-13
Identities = 62/203 (30%), Positives = 98/203 (47%), Gaps = 38/203 (18%)
Query: 437 VLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGYWEEKYRPTSGKIEV------- 489
VL N+N T+N GE + V+G SG GK+TLL ++ G PT G ++V
Sbjct: 42 VLENVNLTVNEGEFICVIGHSGCGKSTLLNMVSGFAS--------PTDGSVQVGGKIITE 93
Query: 490 PKNAKVSVLIPGEIEPEFGSETILEHVYRKIRDLNA----------AVEVLNRAGLSDAV 539
P ++ V + P T LE+VY + +++ A + L GL+D++
Sbjct: 94 PGPDRMVVFQNYALLPWL---TALENVYIAVDAVHSQKTEAEKRAIAKDHLAMVGLTDSM 150
Query: 540 LYRAKFSELSTGQKERAKIASLLAERPNVLLIDEFAAHLDTLTAMRVARKVSEIVREAGI 599
K ++S G K+R IA LA RP VL++DE LD +T + ++ +I +
Sbjct: 151 --DKKPGQISGGMKQRVSIARALAIRPEVLILDEPFGALDAITKEELQEELLQIWNDHRC 208
Query: 600 TAVIITHRPEVVKALDPDKVLFV 622
T ++ITH D D+ LF+
Sbjct: 209 TVLMITH--------DIDEALFL 223
>sp|Q47538|TAUB_ECOLI TAURINE TRANSPORT ATP-BINDING PROTEIN TAUB >gi|7445736|pir||F64764
taurine transport protein - Escherichia coli
>gi|1384059|dbj|BAA12839.1| (D85613) ATP-binding protein
[Escherichia coli] >gi|1657561|gb|AAB18089.1| (U73857)
ATP-binding protein [Escherichia coli]
>gi|1786563|gb|AAC73469.1| (AE000143) taurine
ATP-binding component of a transport system [Escherichia
coli K12]
Length = 255
Score = 76.5 bits (185), Expect = 9e-13
Identities = 63/205 (30%), Positives = 100/205 (48%), Gaps = 9/205 (4%)
Query: 435 RPVLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGYWEEKYRPTSGKIEVPKNAK 494
+P L ++N T+ GE++ V+G SG GKTTLL LI G + Y + +IE P +
Sbjct: 14 KPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVP-YQHGSIQLAGKRIEGPGAER 72
Query: 495 VSV-----LIPGEIEPEFGSETILEHVYRKIRDLNAAVEVLNRAGLSDAVLYRAKFSELS 549
V L+P + + + K++ L A ++L + GL A + +LS
Sbjct: 73 GVVFQNEGLLPWRNVQDNVAFGLQLAGIEKMQRLEIAHQMLKKVGLEGA--EKRYIWQLS 130
Query: 550 TGQKERAKIASLLAERPNVLLIDEFAAHLDTLTAMRVARKVSEIVREAGITAVIITHRPE 609
GQ++R IA LA P +LL+DE LD T ++ + ++ +E G ++ITH E
Sbjct: 131 GGQRQRVGIARALAANPQLLLLDEPFGALDAFTRDQMQTLLLKLWQETGKQVLLITHDIE 190
Query: 610 VVKALDPDKVLF-VGYGTVIVRKSL 633
+ + VL G G V+ R L
Sbjct: 191 EAVFMATELVLLSSGPGRVLERLPL 215
>emb|CAB56736.1| (AL121600) ABC transport protein, ATP-binding subunit [Streptomyces
coelicolor A3(2)]
Length = 252
Score = 76.5 bits (185), Expect = 9e-13
Identities = 63/201 (31%), Positives = 100/201 (49%), Gaps = 23/201 (11%)
Query: 435 RPVLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGYWEEKYRPTSGKIE------ 488
RPVLR L I V A+VG +G+GK+TLL ++ G I RPTSG +
Sbjct: 34 RPVLRQLTCEIPALAVTALVGPNGSGKSTLLGVLAGVI--------RPTSGDLHRDGERP 85
Query: 489 ---VPKNAKVSVLIPGEIEPEFGSETILEH-VYRKI--RDLNAAVEVLNRAGLSDAVLYR 542
VP+ V+ +P + E +R++ RD L+R G++D L
Sbjct: 86 PAFVPQRGAVADALPLTVRQTVEMGRWAERGPWRRLNRRDRLIVDSALDRLGIAD--LAP 143
Query: 543 AKFSELSTGQKERAKIASLLAERPNVLLIDEFAAHLDTLTAMRVARKVSEIVREAGITAV 602
+ ELS GQ++RA +A LA++ ++LL+DE LD R+ ++++V + G+T V
Sbjct: 144 RQLGELSGGQRQRALVAQGLAQQSDLLLLDEPTTGLDPEARQRITALLTDLVAD-GVTVV 202
Query: 603 IITHRPEVVKALDPDKVLFVG 623
TH E ++ + +L G
Sbjct: 203 HATHDLEAARSAEACLLLRAG 223
>gb|AAF58437.1| (AE003820) Mdr49 gene product [Drosophila melanogaster]
Length = 1279
Score = 76.5 bits (185), Expect = 9e-13
Identities = 68/242 (28%), Positives = 114/242 (47%), Gaps = 37/242 (15%)
Query: 410 LDIKG-LPQEIQDLLKAFGVRHRVIQRP---VLRNLNFTINPGEVVAVVGASGAGKTTLL 465
+D KG P+ ++ G+R R RP +L+ L + PG+ VA VGASG GK+TL+
Sbjct: 388 MDEKGNRPENTAGHIRFEGIRFRYPARPDVEILKGLTVDVLPGQTVAFVGASGCGKSTLI 447
Query: 466 RLILGAIKGYWEEKYRPTSGKIEVPKN---------AKVSVLIPGEIEPEFGSETILEHV 516
+L+ + Y P +G +++ + + + G+ EP + TI E++
Sbjct: 448 QLM--------QRFYDPEAGSVKLDGRDLRTLNVGWLRSQIGVVGQ-EPVLFATTIGENI 498
Query: 517 -YRKIRDLNAAVEVLNRAGLSDAVLYRA----------KFSELSTGQKERAKIASLLAER 565
Y + A +E RA + R K +++S GQK+R IA L +
Sbjct: 499 RYGRPSATQADIEKAARAANCHDFITRLPKGYDTQVGEKGAQISGGQKQRIAIARALVRQ 558
Query: 566 PNVLLIDEFAAHLDTLTAMRVARKVSEIVREAGITAVIITHRPEVVKALDPDKVLFVGYG 625
P VLL+DE + LD + RV + + G T +++ HR + + DK++F+ G
Sbjct: 559 PQVLLLDEATSALDPTSEKRVQSALE--LASQGPTTLVVAHRLSTI--TNADKIVFLKDG 614
Query: 626 TV 627
V
Sbjct: 615 VV 616
Score = 74.9 bits (181), Expect = 3e-12
Identities = 74/266 (27%), Positives = 113/266 (41%), Gaps = 56/266 (21%)
Query: 371 FKEDPYAPKEPLWKPSYGKVEMLEGPIVFKNVTKVFESELDIKGLPQEIQDLLKAFGVRH 430
FK P P + Y VE EG IV++NV + + KG
Sbjct: 1012 FKRTSTQPNPP--QSPYNTVEKSEGDIVYENVGFEYPTR---KG---------------- 1050
Query: 431 RVIQRPVLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGYWEEKYRPTSGKI--- 487
P+L+ LN TI VA+VG SG+GK+T ++L+L Y P SG +
Sbjct: 1051 ----TPILQGLNLTIKKSTTVALVGPSGSGKSTCVQLLL--------RYYDPVSGSVNLS 1098
Query: 488 -----EVPKNAKVSVLIPGEIEPEFGSETILEHV-----YRKIRDLNAAVEVLNRAGLSD 537
E P + S L EP TI E++ +R + +E ++ + +
Sbjct: 1099 GVPSTEFPLDTLRSKLGLVSQEPVLFDRTIAENIAYGNNFRDDVSMQEIIEAAKKSNIHN 1158
Query: 538 AV--------LYRAKFSELSTGQKERAKIASLLAERPNVLLIDEFAAHLDTLTAMRVARK 589
+ K S+LS GQK+R IA L P +L++DE + LD L + +V ++
Sbjct: 1159 FISALPQGYDTRLGKTSQLSGGQKQRIAIARALVRNPKILILDEATSALD-LESEKVVQQ 1217
Query: 590 VSEIVREAGITAVIITHRPEVVKALD 615
+ R +G T + I HR V+ D
Sbjct: 1218 ALDEAR-SGRTCLTIAHRLTTVRNAD 1242
>pir||H82377 ABC transporter, ATP-binding protein VCA1101 [imported] - Vibrio
cholerae (group O1 strain N16961)
>gi|9658548|gb|AAF96993.1| (AE004435) ABC transporter,
ATP-binding protein [Vibrio cholerae]
Length = 486
Score = 76.5 bits (185), Expect = 9e-13
Identities = 54/174 (31%), Positives = 91/174 (52%), Gaps = 16/174 (9%)
Query: 440 NLNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGYWEEKYRPTSGKIE------VPKNA 493
+L+FT++ GE++ + G SG GK+TL L+LG +K P+ G+I + K
Sbjct: 307 SLSFTLSAGEILGISGDSGCGKSTLADLLLGLLK--------PSQGRIHRLQAIPLGKAL 358
Query: 494 KVSVLIPGEIEPEFGSETILEHVYRKIRDLNAAV-EVLNRAGLSDAVLYRAKFSELSTGQ 552
K+ P + +T+LE V R+ + + +L R LS +L R K +++S G+
Sbjct: 359 KLYQDPPSALAKSVTLQTLLEDVCRQHSVERSQIPRLLERLALSPNLLSR-KANQVSGGE 417
Query: 553 KERAKIASLLAERPNVLLIDEFAAHLDTLTAMRVARKVSEIVREAGITAVIITH 606
+R I L RP +L+ DE + LD +TA + + E+ +E G V+I+H
Sbjct: 418 LQRFAILRALLTRPTLLVADEPTSRLDPITAASTLQLIIELTQEIGCALVLISH 471
>pir||G83607 polyamine transport protein PotG PA0302 [imported] - Pseudomonas
aeruginosa (strain PAO1)
>gi|9946147|gb|AAG03691.1|AE004468_3 (AE004468)
polyamine transport protein PotG [Pseudomonas
aeruginosa]
Length = 384
Score = 76.5 bits (185), Expect = 9e-13
Identities = 60/212 (28%), Positives = 106/212 (49%), Gaps = 23/212 (10%)
Query: 412 IKGLPQEIQDLLKAFGVRHRVIQRPVLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGA 471
++G Q + L+K V + + + ++ TIN GE+ A++G SG+GK+TLLR++ G
Sbjct: 12 LEGNQQPKEVLVKIDRVTKQFDETLAVDTVSLTINKGEIFALLGGSGSGKSTLLRMLAGF 71
Query: 472 IKGYWEEKYRPTSGKIEVPKNAKVSVLIPGE--IEPEFGSETILEHV-------YRKIRD 522
RPT G+I + ++ L P E I F S + H+ + +D
Sbjct: 72 --------ERPTEGRIFLD-GQDITDLPPYERPINMMFQSYALFPHMSVAQNIAFGLKQD 122
Query: 523 LNAAVEVLNRAGLSDAVLYRAKFS-----ELSTGQKERAKIASLLAERPNVLLIDEFAAH 577
E+ R +++ +++ +LS GQ++R +A LA+RP +LL+DE
Sbjct: 123 GLPKAEIDERVAEMLKLVHMTQYAKRKPHQLSGGQRQRVALARSLAKRPKLLLLDEPMGA 182
Query: 578 LDTLTAMRVARKVSEIVREAGITAVIITHRPE 609
LD ++ ++ EI+ G+T V++TH E
Sbjct: 183 LDKKLRSQMQLELVEIIERVGVTCVMVTHDQE 214
>dbj|BAB04534.1| (AP001509) ABC transporter (ATP-binding protein) [Bacillus
halodurans]
Length = 611
Score = 76.5 bits (185), Expect = 9e-13
Identities = 62/211 (29%), Positives = 106/211 (49%), Gaps = 17/211 (8%)
Query: 434 QRPVLRNLNFTINPGEVVAVVGASGAGKTTLLRLIL-------GAIKGYWEE--KYRPTS 484
Q+ L NL+F +NPGE VA++G +GAGKTT++RL+ GAI E+ + S
Sbjct: 377 QKTTLNNLSFHVNPGETVALIGPTGAGKTTIIRLLSRFYEWDGGAIYVDGEDVTTWDRES 436
Query: 485 GKIEVPKNAKVSVLIPGEIEP--EFGS-ETILEHVYRKIRDLNAAVEVLNRAGLSDAVLY 541
+ + + S L G I +G E E V + NA ++ D VL
Sbjct: 437 YRRHLAFVLQESFLFQGTIRENIRYGRLEATDEEVEAAAKMANAHSFIMRLPDQYDTVL- 495
Query: 542 RAKFSELSTGQKERAKIASLLAERPNVLLIDEFAAHLDTLTAMRVARKVSEIVREAGITA 601
+ S +S GQK+ IA + P++L++DE +++DT+T + + + ++ G T+
Sbjct: 496 DSDGSGISQGQKQLLSIARAMIANPSILILDEATSNIDTITELNIQEALHRLMN--GRTS 553
Query: 602 VIITHRPEVVKALDPDKVLFVGYGTVIVRKS 632
+I HR ++ D +L + GT++ + S
Sbjct: 554 FVIAHRLNTIQ--HADVILVLEKGTLVEQGS 582
>sp|P45022|YA78_HAEIN PROBABLE AMINO-ACID ABC TRANSPORTER ATP-BINDING PROTEIN HI1078
>gi|1075335|pir||G64181 ABC-type transport protein
HI1078 - Haemophilus influenzae
>gi|1574632|gb|AAC22734.1| (U32788) amino acid ABC
transporter, ATP-binding protein [Haemophilus influenzae
Rd]
Length = 257
Score = 76.1 bits (184), Expect = 1e-12
Identities = 64/227 (28%), Positives = 113/227 (49%), Gaps = 26/227 (11%)
Query: 422 LLKAFGVRHRVIQRPVLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGYWEEKYR 481
+LK ++ VL+ ++F IN GEVVA++G SG+GKTT LR L ++ +
Sbjct: 3 MLKVSNIQKNFNGNHVLKGIDFEINKGEVVAILGPSGSGKTTFLR-CLNLLERPEQGILE 61
Query: 482 PTSGKIEVPKNAKVSVLIPGEIEPE----------FGSETILEHVYR---------KIRD 522
T G +++ + K+S ++ F + LE+V K +
Sbjct: 62 FTDGSLKIDFSQKISKADELKLRRRSSMVFQQYNLFPHRSALENVMEGMVVVQKQDKAQA 121
Query: 523 LNAAVEVLNRAGLSD-AVLYRAKFSELSTGQKERAKIASLLAERPNVLLIDEFAAHLDTL 581
A+ +L + GL + A L+ S+LS GQ++R IA LA +P+++L+DE + LD
Sbjct: 122 REKALSLLEKVGLKNKADLFP---SQLSGGQQQRVGIARALAVKPDIILLDEPTSALDPE 178
Query: 582 TAMRVARKVSEIVREAGITAVIITHRPEVVKALDPDKVLFVGYGTVI 628
V + + + +E G T +I+TH + K + D+V+ + G ++
Sbjct: 179 LVGEVLQTLKMLAQE-GWTMIIVTHEMQFAKDV-ADRVILMADGHIV 223
>pir||E69742 ABC transporter (ATP-binding protein) homolog ybaE - Bacillus
subtilis >gi|1644203|dbj|BAA10984.1| (D64126) unknown
[Bacillus subtilis] >gi|2632413|emb|CAB11922.1| (Z99104)
similar to ABC transporter (ATP-binding protein)
[Bacillus subtilis]
Length = 276
Score = 76.1 bits (184), Expect = 1e-12
Identities = 64/217 (29%), Positives = 103/217 (46%), Gaps = 34/217 (15%)
Query: 434 QRPVLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGYWEEKYRPTSGKIEVPKNA 493
+R L ++N +I G VAV+G +G+GK+TLL+ + G +K PT G+I +
Sbjct: 6 ERLALYDINASIKEGSYVAVIGHTGSGKSTLLQHLNGLLK--------PTKGQISLGSTV 57
Query: 494 ---------------KVSVLIPGEIEPEFGSETILEHV--------YRKIRDLNAAVEVL 530
KV ++ E + ET+L+ + +K A E+L
Sbjct: 58 IQAGKKNKDLKKLRKKVGIVFQFP-EHQLFEETVLKDISFGPMNFGVKKEDAEQKAREML 116
Query: 531 NRAGLSDAVLYRAKFSELSTGQKERAKIASLLAERPNVLLIDEFAAHLDTLTAMRVARKV 590
GLS+ +L R+ F ELS GQ R IA +LA P VL++DE A LD +
Sbjct: 117 QLVGLSEELLDRSPF-ELSGGQMRRVAIAGVLAMDPEVLVLDEPTAGLDPRGRKEIMDMF 175
Query: 591 SEIVREAGITAVIITHRPEVVKALDPDKVLFVGYGTV 627
E+ + +T +++TH E A D+++ + GT+
Sbjct: 176 YELHQRGNLTTILVTHSMEDAAAY-ADEMIVMHKGTI 211
>pir||S77459 ABC-type transport protein slr1149 - Synechocystis sp. (strain PCC
6803) >gi|1652384|dbj|BAA17306.1| (D90905) ABC
transporter [Synechocystis sp.]
Length = 601
Score = 76.1 bits (184), Expect = 1e-12
Identities = 69/256 (26%), Positives = 121/256 (46%), Gaps = 31/256 (12%)
Query: 391 EMLEGPIVFKNVTKVFESELD--IKGLPQEIQDLLKAFGVRHRVIQRPVLRNLNFTINPG 448
E++E P+ K+ + E++ ++G EI FG + VL+NLNFTI PG
Sbjct: 333 ELMEEPVEIKDQAVITPIEINGALRGSHGEICFENVWFGYKP---DEYVLKNLNFTIKPG 389
Query: 449 EVVAVVGASGAGKTTLLRLILGA--------------IKGYWEEKYRPTSGKIEVPKNAK 494
E VA+VG +GAGK++++RL+ I+ +++ R G I +
Sbjct: 390 EKVALVGPTGAGKSSIIRLLCRLHDPSRGRILVDGIDIRELSQQQLRRFIGVI-----LQ 444
Query: 495 VSVLIPGEIEPE--FGSETILEHVYRKIRDLNAAVEVLNRAGLSDAVLYRAKFSELSTGQ 552
S L G+++ G E LE V R + L + ++ R + S LS GQ
Sbjct: 445 DSFLFAGDVKRNITLGEEYSLEEVQRAAQ-LTSVDRLIEELPQGYHTQLRERGSNLSGGQ 503
Query: 553 KERAKIASLLAERPNVLLIDEFAAHLDTLTAMRVARKVSEIVREAGITAVIITHRPEVVK 612
K+ A + P VL++DE A LD T + + ++++ T++II HR ++
Sbjct: 504 KQLLAFARVAIREPYVLVMDEATASLDVRTEADIQAALLHLLQDR--TSIIIAHRLSTIR 561
Query: 613 ALDPDKVLFVGYGTVI 628
+ D++ + +G ++
Sbjct: 562 --NVDRIFVLKHGEIV 575
>gb|AAB58722.2| (AF001155) TAP2 [Mesocricetus auratus]
Length = 729
Score = 76.1 bits (184), Expect = 1e-12
Identities = 66/236 (27%), Positives = 116/236 (48%), Gaps = 38/236 (16%)
Query: 418 EIQDLLKAFGVRHRVIQRPVLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGYWE 477
E QD+ ++ R ++PVL+ L FT++PG+V A+VG +G+GK+T+ L+ +
Sbjct: 494 EFQDVTFSYPSRP---EKPVLKGLTFTLHPGKVTALVGPNGSGKSTVAALL--------Q 542
Query: 478 EKYRPTSGKIEVPKNAKV---------SVLIPGEIEPEFGSETILEHVYRKIRDL-NAAV 527
Y+PT G++ + V V++ G+ EP S ++ +++ ++D +A V
Sbjct: 543 NLYQPTGGQLLLDGQPLVQYDHHYLHRQVVLVGQ-EPVLFSGSVKDNIAYGLKDCEDAQV 601
Query: 528 EVLNRAGLSDAVL----------YRAKFSELSTGQKERAKIASLLAERPNVLLIDEFAAH 577
RA +D + K S+L+ GQK+R IA L P VL++DE +
Sbjct: 602 MAAVRAACADDFIGEMPDGIHTEIGEKGSQLAVGQKQRLAIARALVRNPRVLILDEATSA 661
Query: 578 LDTLTAMRVARKVSEIVREAGITAVIITHRPEVVKALDPDKVLFVGYGTVIVRKSL 633
LD+ + S+ R T ++I HR V+ + D+VL + G ++ L
Sbjct: 662 LDSQCEQALQAWRSKGDR----TVLVIAHRLHTVQ--NVDQVLVLKQGQLVEHSQL 711
>gb|AAB58724.2| (AF001157) TAP2 [Mesocricetus auratus]
Length = 729
Score = 76.1 bits (184), Expect = 1e-12
Identities = 66/236 (27%), Positives = 116/236 (48%), Gaps = 38/236 (16%)
Query: 418 EIQDLLKAFGVRHRVIQRPVLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGYWE 477
E QD+ ++ R ++PVL+ L FT++PG+V A+VG +G+GK+T+ L+ +
Sbjct: 494 EFQDVTFSYPSRP---EKPVLKGLTFTLHPGKVTALVGPNGSGKSTVAALL--------Q 542
Query: 478 EKYRPTSGKIEVPKNAKV---------SVLIPGEIEPEFGSETILEHVYRKIRDL-NAAV 527
Y+PT G++ + V V++ G+ EP S ++ +++ ++D +A V
Sbjct: 543 NLYQPTGGQLLLDGQPLVQYDHHYLHRQVVLVGQ-EPVLFSGSVKDNIAYGLKDCEDAQV 601
Query: 528 EVLNRAGLSDAVL----------YRAKFSELSTGQKERAKIASLLAERPNVLLIDEFAAH 577
RA +D + K S+L+ GQK+R IA L P VL++DE +
Sbjct: 602 MAAVRAACADDFIGEMPDGIHTEIGEKGSQLAVGQKQRLAIARALVRNPRVLILDEATSA 661
Query: 578 LDTLTAMRVARKVSEIVREAGITAVIITHRPEVVKALDPDKVLFVGYGTVIVRKSL 633
LD+ + S+ R T ++I HR V+ + D+VL + G ++ L
Sbjct: 662 LDSQCEQALQAWRSKGDR----TVLVIAHRLHTVQ--NVDQVLVLKQGQLVEHSQL 711
>dbj|BAB04930.1| (AP001511) ABC transporter (ATP-binding protein) [Bacillus
halodurans]
Length = 264
Score = 76.1 bits (184), Expect = 1e-12
Identities = 66/217 (30%), Positives = 102/217 (46%), Gaps = 24/217 (11%)
Query: 419 IQDLLKAFGVRHRVIQRPVLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGYWEE 478
I+D+ K F + V N+N I+ GE V+++G SG GK+TLL ++ G K
Sbjct: 6 IKDVGKTFEGKEEQSSYQVFENINLEIHSGEFVSLLGPSGCGKSTLLNIVAGLEKA---- 61
Query: 479 KYRPTSGKIEVPKNAKVSVLIPGEIEPEFGSE-------TILEHVYRKIRDLNAAVEVLN 531
++G + V +N V+ PG E T+L++V IR E
Sbjct: 62 ----SNGAVYVGQN---KVIEPGPDRGVVFQEAALMPWLTVLDNVVFAIRKQYNKEEAKK 114
Query: 532 RAGLSDAVLYRAKFS-----ELSTGQKERAKIASLLAERPNVLLIDEFAAHLDTLTAMRV 586
RA +++ +KF+ ELS G K+R IA LA P+VLL+DE LD T +
Sbjct: 115 RALEYLKLVHLSKFTHSYPHELSGGMKQRVAIARALALDPDVLLMDEPFGALDEQTRSML 174
Query: 587 ARKVSEIVREAGITAVIITHRPEVVKALDPDKVLFVG 623
R++ I ++ T + +TH L DK+ +G
Sbjct: 175 HRELQAIWQQTKKTIIFVTHNIREAILLS-DKIFLMG 210
>gb|AAG25076.1|AF273216_1 (AF273216) ABC transporter RzcB [Rhizobium leguminosarum bv.
viciae]
Length = 735
Score = 76.1 bits (184), Expect = 1e-12
Identities = 63/210 (30%), Positives = 103/210 (49%), Gaps = 32/210 (15%)
Query: 424 KAFGVRHRVIQRPVLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGYWEEKYRPT 483
K+ R+ + VL+++NF+I PGEV+ +VG SG+GK+TL +L+ + Y P
Sbjct: 494 KSVNFRYSPDGQDVLKDINFSIRPGEVIGIVGPSGSGKSTLTKLV--------QRFYIPN 545
Query: 484 SGKIEVPKNAKVSVLIPGEIEPEFG---SETIL---EHVYRKIRDLNAAVE---VLNRAG 534
+G++ V ++ + P + G E +L ++ I +N A+ + A
Sbjct: 546 NGQVFV-DGQDIAQVDPAWLRSNIGVVLQENMLLFNRTIHDNICMVNPAMSRAAAIQMAR 604
Query: 535 LSDAVLYRAKF------------SELSTGQKERAKIASLLAERPNVLLIDEFAAHLDTLT 582
LS A + AK + LS GQ++R IA LA P +L++DE + LD +
Sbjct: 605 LSGADQFIAKLPRGYDTLIEERGANLSGGQRQRLAIARALATNPPILILDEATSALDYES 664
Query: 583 AMRVARKVSEIVREAGITAVIITHRPEVVK 612
+ + EIVR G T +II HR V+
Sbjct: 665 ERIILGNMREIVR--GRTVIIIAHRLATVR 692
>gi|6323217 ATP-binding cassette (ABC) transporter family member; Mdl1p
[Saccharomyces cerevisiae]
>gi|1346512|sp|P33310|MDL1_YEAST ATP-DEPENDENT PERMEASE
MDL1 >gi|1078101|pir||S51433 MDL1 protein - yeast
(Saccharomyces cerevisiae) >gi|577195|gb|AAB67455.1|
(U17246) Mdl1p [Saccharomyces cerevisiae]
Length = 695
Score = 75.7 bits (183), Expect = 1e-12
Identities = 77/271 (28%), Positives = 124/271 (45%), Gaps = 51/271 (18%)
Query: 379 KEPLWKPSYGK--VEMLEGPIVFKNVTKVFESELDIKGLPQEIQDLLKAFGVRHRVIQRP 436
++PL +P+ GK V + + PIVFKNV+ + + +H++
Sbjct: 412 RKPLIRPTIGKDPVSLAQKPIVFKNVSFTYPTR------------------PKHQIF--- 450
Query: 437 VLRNLNFTINPGEVVAVVGASGAGKTTLLRLIL--------------GAIKGYWEEKYRP 482
++LN TI PGE V VG SG+GK+T+ L+L I+ + KYR
Sbjct: 451 --KDLNITIKPGEHVCAVGPSGSGKSTIASLLLRYYDVNSGSIEFGDEDIRNFNLRKYRR 508
Query: 483 TSGKIEVPK---NAKVSVLIPGEIEPEFGSETILEHVYRKIRDLNAAVEVLN-RAGLSDA 538
G ++ N + I I PE + + + R I N + N GL
Sbjct: 509 LIGYVQQEPLLFNGTILDNILYCIPPEIAEQD--DRIRRAIGKANCTKFLANFPDGLQTM 566
Query: 539 VLYRAKFSELSTGQKERAKIASLLAERPNVLLIDEFAAHLDTLTAMRVARKVSEIVREAG 598
V A+ ++LS GQK+R +A P VL++DE + LD+ + VA+ + V E G
Sbjct: 567 V--GARGAQLSGGQKQRIALARAFLLDPAVLILDEATSALDSQSEEIVAKNLQRRV-ERG 623
Query: 599 ITAVIITHRPEVVKALDPDKVLFVG-YGTVI 628
T + I HR +K +V+ +G +G+V+
Sbjct: 624 FTTISIAHRLSTIK--HSTRVIVLGKHGSVV 652
>dbj|BAA12015.1| (D83582) metalloprotease transporter [Serratia marcescens]
Length = 582
Score = 75.7 bits (183), Expect = 1e-12
Identities = 60/207 (28%), Positives = 101/207 (47%), Gaps = 29/207 (14%)
Query: 436 PVLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGYWEEKYRPTSGKIEVPKNAKV 495
PVL ++F + GEV+ V+GASG+GKT L+R ++GA+ P SG + + A +
Sbjct: 335 PVLHGVSFRLEAGEVLGVIGASGSGKTLLMRQLVGAL--------TPLSGDVRL-DGADI 385
Query: 496 SVLIPGEIEPEFG---------SETILEHVYRKIR-DLNAAVEVLNRAGLSDAVLYRAKF 545
++ P +G + T+ E++ R + D V AG+ +L+ K
Sbjct: 386 RQWDKQQLGPLYGYLPQDIQLFAGTLTENIARFGQVDAEKVVAAAALAGVHQLILHLPKG 445
Query: 546 SE---------LSTGQKERAKIASLLAERPNVLLIDEFAAHLDTLTAMRVARKVSEIVRE 596
E LS GQ++R +A L P ++++DE A+LD + R + E ++
Sbjct: 446 YETELGEGGSGLSGGQRQRVALARALYGSPALVVLDEPNANLDREGEEALLRAI-EALKA 504
Query: 597 AGITAVIITHRPEVVKALDPDKVLFVG 623
G T V++TH+P ++ D VL G
Sbjct: 505 RGTTIVLVTHKPAILATTDKLLVLAAG 531
>pir||T42842 bile salt transport protein, ATP-dependent - rat
>gi|3075422|gb|AAC40084.1| (U69487) bile salt export
pump [Rattus norvegicus]
Length = 1321
Score = 75.7 bits (183), Expect = 1e-12
Identities = 69/247 (27%), Positives = 109/247 (43%), Gaps = 54/247 (21%)
Query: 389 KVEMLEGPIVFKNVTKVFESELDIKGLPQEIQDLLKAFGVRHRVIQRPVLRNLNFTINPG 448
K++ ++G I F NVT + S D+K +L NL+ I PG
Sbjct: 412 KLDRIKGEIEFHNVTFHYPSRPDVK-----------------------ILDNLSMVIKPG 448
Query: 449 EVVAVVGASGAGKTTLLRLILGAIKGYWEEKYRPTSGKIEVPKNAKVSVLIP------GE 502
E A+VG+SGAGK+T L+LI + Y P G + + + S+ I G
Sbjct: 449 ETTALVGSSGAGKSTALQLI--------QRFYDPCEGMVTLDGHDIRSLNIRWLRDQIGI 500
Query: 503 IEPE-------------FGSE-TILEHVYRKIRDLNAAVEVLNRAGLSDAVLYRAKFSEL 548
+E E FG E +E + + +D NA ++ D ++ ++
Sbjct: 501 VEQEPVLFSTTIAENIRFGREDATMEDIVQAAKDANAYNFIMALPQQFDTLVGEGG-GQM 559
Query: 549 STGQKERAKIASLLAERPNVLLIDEFAAHLDTLTAMRVARKVSEIVREAGITAVIITHRP 608
S GQK+R IA L P +LL+D + LD + RV +++I + G T + + HR
Sbjct: 560 SGGQKQRVAIARALIRNPKILLLDMATSALDNESEARVQEALNKI--QHGHTIISVAHRL 617
Query: 609 EVVKALD 615
V+A D
Sbjct: 618 STVRAAD 624
Score = 71.0 bits (171), Expect = 4e-11
Identities = 82/322 (25%), Positives = 137/322 (42%), Gaps = 65/322 (20%)
Query: 337 FEKVGFKFVWE---------TASGRPVLIYPLTQEAKEYLERYFKEDPYAPKEPLWKPSY 387
+E +GF V+ TA GR P +AK R+F+ P ++ +
Sbjct: 1009 YEGLGFSHVFRVVSSVALSATAVGRTFSYTPSYAKAKISAARFFQLLDRKPPINVYSEAG 1068
Query: 388 GKVEMLEGPIVFKNVTKVFESELDIKGLPQEIQDLLKAFGVRHRVIQRPVLRNLNFTINP 447
K + +G I F + + S DI+ VL L+ ++NP
Sbjct: 1069 EKWDNFQGKIDFIDCKFTYPSRPDIQ-----------------------VLNGLSVSVNP 1105
Query: 448 GEVVAVVGASGAGKTTLLRLILGAIKGYWEEKYRPTSGKIEVP--KNAKVSV-LIPGEI- 503
G+ +A VG+SG GK+T ++L+ E Y P G + + + KV++ + I
Sbjct: 1106 GQTLAFVGSSGCGKSTSIQLL--------ERFYDPDQGTVMIDGHDSKKVNIQFLRSNIG 1157
Query: 504 ----EPEFGSETILEHV----YRKIRDLNAAVEVLNRAGLSDAVL-----YRAKF----S 546
EP +I++++ K + A+ +A L D V+ Y S
Sbjct: 1158 IVSQEPVLFDCSIMDNIKYGDNTKEISVERAIAAAKQAQLHDFVMSLPEKYETNVGIQGS 1217
Query: 547 ELSTGQKERAKIASLLAERPNVLLIDEFAAHLDTLTAMRVARKVSEIVREAGITAVIITH 606
+LS G+K+R IA + P +LL+DE + LDT + V + + RE G T ++I H
Sbjct: 1218 QLSRGEKQRIAIARAIVRDPKILLLDEATSALDTESEKTVQTALDK-ARE-GRTCIVIAH 1275
Query: 607 RPEVVKALDPDKVLFVGYGTVI 628
R ++ + D + V G VI
Sbjct: 1276 RLSTIQ--NSDIIAVVSQGVVI 1295
>pir||T42228 P-glycoprotein sister - rat >gi|3273484|gb|AAC24753.1| (AF010597)
P-glycoprotein sister [Rattus norvegicus]
Length = 1321
Score = 75.7 bits (183), Expect = 1e-12
Identities = 69/247 (27%), Positives = 109/247 (43%), Gaps = 54/247 (21%)
Query: 389 KVEMLEGPIVFKNVTKVFESELDIKGLPQEIQDLLKAFGVRHRVIQRPVLRNLNFTINPG 448
K++ ++G I F NVT + S D+K +L NL+ I PG
Sbjct: 412 KLDRIKGEIEFHNVTFHYPSRPDVK-----------------------ILDNLSMVIKPG 448
Query: 449 EVVAVVGASGAGKTTLLRLILGAIKGYWEEKYRPTSGKIEVPKNAKVSVLIP------GE 502
E A+VG+SGAGK+T L+LI + Y P G + + + S+ I G
Sbjct: 449 ETTALVGSSGAGKSTALQLI--------QRFYDPCEGMVTLDGHDIRSLNIRWLRDQIGI 500
Query: 503 IEPE-------------FGSE-TILEHVYRKIRDLNAAVEVLNRAGLSDAVLYRAKFSEL 548
+E E FG E +E + + +D NA ++ D ++ ++
Sbjct: 501 VEQEPVLFSTTIAENIRFGREDATMEDIVQAAKDANAYNFIMALPQQFDTLVGEGG-GQM 559
Query: 549 STGQKERAKIASLLAERPNVLLIDEFAAHLDTLTAMRVARKVSEIVREAGITAVIITHRP 608
S GQK+R IA L P +LL+D + LD + RV +++I + G T + + HR
Sbjct: 560 SGGQKQRVAIARALIRNPKILLLDMATSALDNESEARVQEALNKI--QHGHTIISVAHRL 617
Query: 609 EVVKALD 615
V+A D
Sbjct: 618 STVRAAD 624
Score = 71.0 bits (171), Expect = 4e-11
Identities = 82/322 (25%), Positives = 137/322 (42%), Gaps = 65/322 (20%)
Query: 337 FEKVGFKFVWE---------TASGRPVLIYPLTQEAKEYLERYFKEDPYAPKEPLWKPSY 387
+E +GF V+ TA GR P +AK R+F+ P ++ +
Sbjct: 1009 YEGLGFSHVFRVVSSVVLSATAVGRTFSYTPSYAKAKISAARFFQLLDRKPPINVYSEAG 1068
Query: 388 GKVEMLEGPIVFKNVTKVFESELDIKGLPQEIQDLLKAFGVRHRVIQRPVLRNLNFTINP 447
K + +G I F + + S DI+ VL L+ ++NP
Sbjct: 1069 EKWDNFQGKIDFIDCKFTYPSRPDIQ-----------------------VLNGLSVSVNP 1105
Query: 448 GEVVAVVGASGAGKTTLLRLILGAIKGYWEEKYRPTSGKIEVP--KNAKVSV-LIPGEI- 503
G+ +A VG+SG GK+T ++L+ E Y P G + + + KV++ + I
Sbjct: 1106 GQTLAFVGSSGCGKSTSIQLL--------ERFYDPDQGTVMIDGHDSKKVNIQFLRSNIG 1157
Query: 504 ----EPEFGSETILEHV----YRKIRDLNAAVEVLNRAGLSDAVL-----YRAKF----S 546
EP +I++++ K + A+ +A L D V+ Y S
Sbjct: 1158 IVSQEPVLFDCSIMDNIKYGDNTKEISVERAIAAAKQAQLHDFVMSLPEKYETNVGIQGS 1217
Query: 547 ELSTGQKERAKIASLLAERPNVLLIDEFAAHLDTLTAMRVARKVSEIVREAGITAVIITH 606
+LS G+K+R IA + P +LL+DE + LDT + V + + RE G T ++I H
Sbjct: 1218 QLSRGEKQRIAIARAIVRDPKILLLDEATSALDTESEKTVQTALDK-ARE-GRTCIVIAH 1275
Query: 607 RPEVVKALDPDKVLFVGYGTVI 628
R ++ + D + V G VI
Sbjct: 1276 RLSTIQ--NSDIIAVVSQGVVI 1295
>gi|4502457 ATP-binding cassette, sub-family B (MDR/TAP), member 11; ABC member
16, MDR/TAP subfamily; bile salt export pump;
progressive familial intrahepatic cholestasis 2 [Homo
sapiens] >gi|3873243|gb|AAC77455.1| (AF091582) bile salt
export pump [Homo sapiens]
Length = 1321
Score = 75.7 bits (183), Expect = 1e-12
Identities = 71/262 (27%), Positives = 115/262 (43%), Gaps = 56/262 (21%)
Query: 389 KVEMLEGPIVFKNVTKVFESELDIKGLPQEIQDLLKAFGVRHRVIQRPVLRNLNFTINPG 448
K++ ++G I F NVT + S ++K +L +LN I PG
Sbjct: 412 KLDRIKGEIEFHNVTFHYPSRPEVK-----------------------ILNDLNMVIKPG 448
Query: 449 EVVAVVGASGAGKTTLLRLILGAIKGYWEEKYRPTSGKIEVPKNAKVSVLIPG------- 501
E+ A+VG SGAGK+T L+LI + Y P G + V + S+ I
Sbjct: 449 EMTALVGPSGAGKSTALQLI--------QRFYDPCEGMVTVDGHDIRSLNIQWLRDQIGI 500
Query: 502 -EIEPEFGSETI------------LEHVYRKIRDLNAAVEVLNRAGLSDAVLYRAKFSEL 548
E EP S TI +E + + ++ NA +++ D ++ ++
Sbjct: 501 VEQEPVLFSTTIAENIRYGREDATMEDIVQAAKEANAYNFIMDLPQQFDTLVGEGG-GQM 559
Query: 549 STGQKERAKIASLLAERPNVLLIDEFAAHLDTLTAMRVARKVSEIVREAGITAVIITHRP 608
S GQK+R IA L P +LL+D + LD + V +S+I + G T + + HR
Sbjct: 560 SGGQKQRVAIARALIRNPKILLLDMATSALDNESEAMVQEVLSKI--QHGHTIISVAHRL 617
Query: 609 EVVKALDPDKVLFVGYGTVIVR 630
V+A D ++ +GT + R
Sbjct: 618 STVRA--ADTIIGFEHGTAVER 637
>pir||T31073 multidrug resistance p-glycoprotein - nematode (Haemonchus contortus)
>gi|3057042|gb|AAC38987.1| (AF003908) P-glycoprotein
[Haemonchus contortus]
Length = 1275
Score = 75.7 bits (183), Expect = 1e-12
Identities = 66/211 (31%), Positives = 100/211 (47%), Gaps = 35/211 (16%)
Query: 437 VLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGYWEEKYRPTSGKIEVP------ 490
VLR LN INPG VA+VG SG GK+T++ L+ E Y G I V
Sbjct: 1047 VLRGLNLEINPGTTVALVGQSGCGKSTVMALL--------ERFYNQNKGVITVDGENIRN 1098
Query: 491 ---KNAKVSVLIPGEIEPEFGSETILEHVYRKIRDLNAAVEVLNRA-----------GLS 536
+N + V I + EP TI+E++ + D + E + A GL
Sbjct: 1099 MNIRNLREQVCIVSQ-EPTLFDCTIMENICYGLDDPKPSYEQVVAAAKMANIHNFVLGLP 1157
Query: 537 DAVLYRA--KFSELSTGQKERAKIASLLAERPNVLLIDEFAAHLDTLTAMRVARKVSEIV 594
+ R K ++LS GQK+R IA L P +LL+DE + LDT + ++ + E+
Sbjct: 1158 EGYDTRVGEKGTQLSGGQKQRIAIARALIRDPPILLLDEATSALDT-ESEKIVQDALEVA 1216
Query: 595 REAGITAVIITHRPEVVKALDPDKVLFVGYG 625
R+ G T ++I HR ++ D D ++ + G
Sbjct: 1217 RQ-GRTCLVIAHRLSTIQ--DSDVIVMIQEG 1244
>pir||B72097 dipeptide transporter ATPase - Chlamydophila pneumoniae (strain
CWL029) >gi|4376554|gb|AAD18429.1| (AE001613) Dipeptide
Transporter ATPase [Chlamydophila pneumoniae CWL029]
>gi|8163441|gb|AAF73675.1| (AE002208) ABC transporter,
ATP-binding protein [Chlamydophila pneumoniae AR39]
>gi|8978654|dbj|BAA98490.1| (AP002546) dipeptide
transporter ATPase [Chlamydophila pneumoniae J138]
Length = 341
Score = 75.7 bits (183), Expect = 1e-12
Identities = 59/220 (26%), Positives = 103/220 (46%), Gaps = 41/220 (18%)
Query: 419 IQDLLKAFGVRHRVIQRPVLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGYWEE 478
+QD+ K G +L ++F++ PGEV +VG SG+GKTTLLR + +
Sbjct: 11 VQDVSKKLG------DHILLSKVSFSVYPGEVFGIVGHSGSGKTTLLRCL--------DF 56
Query: 479 KYRPTSGKIEVP-------------KNAKVSVLIPGEIEPEFGSETILEHVYRKIRDLNA 525
PTSG I V +N V + F S+T+ E++ +R ++
Sbjct: 57 LDMPTSGSISVAGFDNSLPTQKFSRRNFSKKVAYISQNYGLFSSKTVFENIAYPLRIHHS 116
Query: 526 AVEVLNRAGLSDAVLYRAKF-----------SELSTGQKERAKIASLLAERPNVLLIDEF 574
++++ + + V F LS GQK++ IA + +P V+L DE
Sbjct: 117 E---MSKSEVEEQVYDTLNFLNLYHRHDAYPGNLSGGQKQKVAIARAIVCQPEVVLCDEI 173
Query: 575 AAHLDTLTAMRVARKVSEIVREAGITAVIITHRPEVVKAL 614
+ LD + + ++ ++ +E GIT V+++H +VVK +
Sbjct: 174 TSALDPKSTENIIERLLQLNQERGITLVLVSHEIDVVKKI 213
>gb|AAD28285.1|AF136523_1 (AF136523) bile salt export pump [Homo sapiens]
Length = 1321
Score = 75.7 bits (183), Expect = 1e-12
Identities = 71/262 (27%), Positives = 115/262 (43%), Gaps = 56/262 (21%)
Query: 389 KVEMLEGPIVFKNVTKVFESELDIKGLPQEIQDLLKAFGVRHRVIQRPVLRNLNFTINPG 448
K++ ++G I F NVT + S ++K +L +LN I PG
Sbjct: 412 KLDRIKGEIEFHNVTFHYPSRPEVK-----------------------ILNDLNMAIKPG 448
Query: 449 EVVAVVGASGAGKTTLLRLILGAIKGYWEEKYRPTSGKIEVPKNAKVSVLIPG------- 501
E+ A+VG SGAGK+T L+LI + Y P G + V + S+ I
Sbjct: 449 EMTALVGPSGAGKSTALQLI--------QRFYDPCEGMVTVDGHDIRSLNIQWLRDQIGI 500
Query: 502 -EIEPEFGSETI------------LEHVYRKIRDLNAAVEVLNRAGLSDAVLYRAKFSEL 548
E EP S TI +E + + ++ NA +++ D ++ ++
Sbjct: 501 VEQEPVLFSTTIAENIRYGREDATMEDIVQAAKEANAYNFIMDLPQQFDTLVGEGG-GQM 559
Query: 549 STGQKERAKIASLLAERPNVLLIDEFAAHLDTLTAMRVARKVSEIVREAGITAVIITHRP 608
S GQK+R IA L P +LL+D + LD + V +S+I + G T + + HR
Sbjct: 560 SGGQKQRVAIARALIRNPKILLLDMATSALDNESEAMVQEVLSKI--QHGHTIISVAHRL 617
Query: 609 EVVKALDPDKVLFVGYGTVIVR 630
V+A D ++ +GT + R
Sbjct: 618 STVRA--ADTIIGFEHGTAVER 637
>emb|CAB88985.1| (AL353864) putative ABC-transport protein. [Streptomyces coelicolor
A3(2)]
Length = 624
Score = 75.7 bits (183), Expect = 1e-12
Identities = 63/212 (29%), Positives = 97/212 (45%), Gaps = 33/212 (15%)
Query: 437 VLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGYWEEKYRPTSGKIEVPKNAKVS 496
VL L+F PG+ +A+VG+SGAGK+T+ +L+ Y G + V V
Sbjct: 394 VLHGLSFRAEPGQTIALVGSSGAGKSTIAQLL--------PRLYDTDGGTVRV-GGVDVR 444
Query: 497 VLIPGEIEPEFGSETILEHVYRKIRDLNAAV-----------EVLNRAGLSDAV------ 539
L + G T H++ N + E L RA L+D V
Sbjct: 445 ELSARSLRDTVGMVTQDGHLFHDTVRANLLLARPDATEDDLWEALRRARLADLVRSLPDG 504
Query: 540 ---LYRAKFSELSTGQKERAKIASLLAERPNVLLIDEFAAHLDTLTAMRVARKVSEIVRE 596
+ + LS G+++R IA LL R V+++DE AHLD + V ++E ++
Sbjct: 505 LDTVVGERGYRLSGGERQRMTIARLLLARQRVVILDEATAHLDNTSEAAVQEALTEALQ- 563
Query: 597 AGITAVIITHRPEVVKALDPDKVLFVGYGTVI 628
G TAV+I HR V+A D++L V G ++
Sbjct: 564 -GRTAVVIAHRLSTVRA--ADRILVVEAGRIV 592
>pir||H82440 ABC transporter, ATP-binding protein VCA0602 [imported] - Vibrio
cholerae (group O1 strain N16961)
>gi|9658013|gb|AAF96503.1| (AE004390) ABC transporter,
ATP-binding protein [Vibrio cholerae]
Length = 403
Score = 75.7 bits (183), Expect = 1e-12
Identities = 64/229 (27%), Positives = 112/229 (47%), Gaps = 40/229 (17%)
Query: 418 EIQDLLKAFGVRHRVIQRPVLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGYWE 477
+I+ ++K FG L+ ++ +I GE V +G SG GKTTLLR I G
Sbjct: 36 DIRHVVKQFG------SFTALKEISLSIEKGEFVCFLGPSGCGKTTLLRAIAGLDL---- 85
Query: 478 EKYRPTSGKIEVPKNAKVSVLIPGEIEPEFG----------SETILEHVYRKIRDLNAAV 527
PTSG I +N + +P E + +FG + T+ E++ +R+ +V
Sbjct: 86 ----PTSGTIH--QNQQAITFLPPE-QRDFGIVFQSYALFPNLTVEENIAIGLRNQGMSV 138
Query: 528 --------EVLNRAGLSDAVLYRAKF-SELSTGQKERAKIASLLAERPNVLLIDEFAAHL 578
+ L GL+ + K+ S+LS GQ++R +A LA P +LL+DE + L
Sbjct: 139 RDALEKVEQWLEMIGLATSA---QKYPSQLSGGQQQRVALARALALSPGLLLLDEPLSAL 195
Query: 579 DTLTAMRVARKVSEIVREAGITAVIITHRPEVVKALDPDKVLFVGYGTV 627
D + ++ ++ R+ GIT +++TH E + D+++ + +G +
Sbjct: 196 DAKVRTHLREEICQLQRKLGITTIMVTHDQEEALTM-ADRIVVMNHGVI 243
>pir||C83221 transport protein HasD PA3406 [imported] - Pseudomonas aeruginosa
(strain PAO1) >gi|9949543|gb|AAG06794.1|AE004761_10
(AE004761) transport protein HasD [Pseudomonas
aeruginosa]
Length = 600
Score = 75.7 bits (183), Expect = 1e-12
Identities = 58/201 (28%), Positives = 99/201 (48%), Gaps = 29/201 (14%)
Query: 434 QRPVLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGYWEEKYRPTSGKIEVPKNA 493
++ +L++L F + PGE + V+G SG+GK+TL RL++GA ++P SG + + A
Sbjct: 345 EQALLQDLGFALEPGEALGVIGPSGSGKSTLARLLVGA--------WQPLSGAVRL-DGA 395
Query: 494 KVSVLIPGEIEPEFG---------SETILEHVYRKIR-DLNAAVEVLNRAGLSDAVL--- 540
+ + P G + +I E++ R D V AG+ D VL
Sbjct: 396 DLRQWSAAALGPHIGYLAQDVQLFAGSIAENIARFAEVDAEKVVAAARLAGVHDLVLRLP 455
Query: 541 --YRAKFSE----LSTGQKERAKIASLLAERPNVLLIDEFAAHLDTLTAMRVARKVSEIV 594
Y + + LS GQ++R +A L RP ++++DE A LD +A ++ +
Sbjct: 456 QGYDTRLGDGGAGLSGGQRQRIGLARALYGRPALIVLDEPNASLDEAGEAALAEAIA-AM 514
Query: 595 REAGITAVIITHRPEVVKALD 615
R G + V++TH+P V+ D
Sbjct: 515 RRQGSSLVLVTHKPAVLALTD 535
>gi|11430459 ATP-binding cassette, sub-family B (MDR/TAP), member 11 [Homo
sapiens]
Length = 1321
Score = 75.7 bits (183), Expect = 1e-12
Identities = 71/262 (27%), Positives = 115/262 (43%), Gaps = 56/262 (21%)
Query: 389 KVEMLEGPIVFKNVTKVFESELDIKGLPQEIQDLLKAFGVRHRVIQRPVLRNLNFTINPG 448
K++ ++G I F NVT + S ++K +L +LN I PG
Sbjct: 412 KLDRIKGEIEFHNVTFHYPSRPEVK-----------------------ILNDLNMVIKPG 448
Query: 449 EVVAVVGASGAGKTTLLRLILGAIKGYWEEKYRPTSGKIEVPKNAKVSVLIPG------- 501
E+ A+VG SGAGK+T L+LI + Y P G + V + S+ I
Sbjct: 449 EMTALVGPSGAGKSTALQLI--------QRFYDPCEGMVTVDGHDIRSLNIQWLRDQIGI 500
Query: 502 -EIEPEFGSETI------------LEHVYRKIRDLNAAVEVLNRAGLSDAVLYRAKFSEL 548
E EP S TI +E + + ++ NA +++ D ++ ++
Sbjct: 501 VEQEPVLFSTTIAENIRYGREDATMEDIVQAAKEANAYNFIMDLPQQFDTLVGEGG-GQM 559
Query: 549 STGQKERAKIASLLAERPNVLLIDEFAAHLDTLTAMRVARKVSEIVREAGITAVIITHRP 608
S GQK+R IA L P +LL+D + LD + V +S+I + G T + + HR
Sbjct: 560 SGGQKQRVAIARALIRNPKILLLDMATSALDNESEAMVQEVLSKI--QHGHTIISVAHRL 617
Query: 609 EVVKALDPDKVLFVGYGTVIVR 630
V+A D ++ +GT + R
Sbjct: 618 STVRA--ADTIIGFEHGTAVER 637
>pir||E82879 ABC transporter UU539 [imported] - Ureaplasma urealyticum
>gi|6899543|gb|AAF30952.1|AE002152_11 (AE002152) ABC
transporter [Ureaplasma urealyticum]
Length = 294
Score = 75.7 bits (183), Expect = 1e-12
Identities = 67/220 (30%), Positives = 105/220 (47%), Gaps = 46/220 (20%)
Query: 434 QRPVLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGYWEEKYRPTSGKIEV---- 489
+R +L+N++FTIN E V V+G +G+GK+T+ +++ G +K P SG I++
Sbjct: 39 ERMILKNVSFTINDNEYVCVIGHNGSGKSTISKVLTGLLK--------PKSGVIKLFGIE 90
Query: 490 -------------------PKNAKVSVLIPGEIEPEFGSETILEHVYRKIRDLNAAVEVL 530
P N V + +I FG E RK+ N +++
Sbjct: 91 ISAANLKYLRNNIGIVFQNPDNQFVGITAEDDI--AFGLEN------RKVPP-NKMWDII 141
Query: 531 NRAGLSDAV--LYRAKFSELSTGQKERAKIASLLAERPNVLLIDEFAAHLDTLTAMRVAR 588
N A ++ + L + + ELS GQK+R IAS+LA P V++ DE + LD +
Sbjct: 142 NDAAVATGIEDLLKKESLELSGGQKQRVAIASVLAINPKVIIFDESTSMLDPKGKNELKE 201
Query: 589 KVSEIVREAGITAVIITH-RPEVVKALDPDKVLFVGYGTV 627
+ + A T + ITH EVVKA DKV+ + G V
Sbjct: 202 LMVSLRDVAKKTIISITHDMEEVVKA---DKVIVMSNGEV 238
>gb|AAK42548.1| ABC transporter, ATP binding protein [Sulfolobus solfataricus]
Length = 248
Score = 75.3 bits (182), Expect = 2e-12
Identities = 59/221 (26%), Positives = 104/221 (46%), Gaps = 16/221 (7%)
Query: 418 EIQDLLKAFGVRHRVIQRPVLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGYWE 477
E Q + +R R+ + +L+ L+F + GEV +VG +GAGKTT LR++ G IK +
Sbjct: 5 EKQFAVSVTNLRKRIGNKEILKGLSFDVESGEVFGIVGPNGAGKTTTLRILAGIIKNFNG 64
Query: 478 EKYRPTSGKIEVPKNAKVSVL----IPGEIEPEFGSETILEHVYR------KIRDLNAAV 527
+ IE +N +S + P E + + +Y K + L +
Sbjct: 65 DAKVFGLRPIEAKQNGYISYMPEDAFPYEKLTGYENLDFYAELYAKGDKELKEKYLKLGI 124
Query: 528 EVLNRAGLSDAVLYRAKFSELSTGQKERAKIASLLAERPNVLLIDEFAAHLDTLTAMRVA 587
E+ N L + + K +E S G K R IA L P + ++DE + LD +A+R+
Sbjct: 125 EIAN---LGERIY--DKTAEYSRGMKRRLIIARTLMVMPKLSVLDEPTSALDVESAVRIR 179
Query: 588 RKVSEIVREAGITAVIITHRPEVVKALDPDKVLFVGYGTVI 628
+ E+ R +T ++ +H V+ L D++ + G ++
Sbjct: 180 NIILEMARRYNMTIILSSHNMLEVEYL-CDRITLINDGRIV 219
>sp|P23174|MDR3_CRIGR MULTIDRUG RESISTANCE PROTEIN 3 (P-GLYCOPROTEIN 3)
>gi|2119778|pir||I48123 p-glycoprotein isoform III -
Chinese hamster >gi|191169|gb|AAA68885.1| (M60042)
p-glycoprotein isoform III [Cricetulus griseus]
Length = 1281
Score = 75.3 bits (182), Expect = 2e-12
Identities = 63/199 (31%), Positives = 95/199 (47%), Gaps = 31/199 (15%)
Query: 437 VLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGYWEEKYRPTSGKIEVP----KN 492
+L+ LN + G+ VA+VG SG GKTT L+L+ + Y PT G I + +N
Sbjct: 411 ILKGLNLKVQSGQTVALVGNSGCGKTTTLQLL--------QRLYDPTEGTISIDGQDIRN 462
Query: 493 AKVSVL--IPGEI--EPEFGSETI------------LEHVYRKIRDLNAAVEVLNRAGLS 536
V L I G + EP S TI +E + + +++ N A E + +
Sbjct: 463 FNVRYLREIIGVVSQEPVLFSTTIAENIRYGRGNVTMEEIKKAVKEAN-AYEFIMKLPQK 521
Query: 537 DAVLYRAKFSELSTGQKERAKIASLLAERPNVLLIDEFAAHLDTLTAMRVARKVSEIVRE 596
L + ++LS GQK+R IA L P +LL+DE + LDT + V + + RE
Sbjct: 522 FDTLVGERGAQLSGGQKQRIAIARALVRNPKILLLDEATSALDTESEAEVQAALDK-ARE 580
Query: 597 AGITAVIITHRPEVVKALD 615
G T ++I HR V+ D
Sbjct: 581 -GRTTIVIAHRLSTVRNAD 598
>pir||H70788 probable peptidetransport system ABC-transporter ATP-binding
protein - Mycobacterium tuberculosis (strain H37RV)
>gi|2960087|emb|CAA17985.1| (AL022121) dppD
[Mycobacterium tuberculosis]
Length = 548
Score = 75.3 bits (182), Expect = 2e-12
Identities = 60/230 (26%), Positives = 107/230 (46%), Gaps = 34/230 (14%)
Query: 427 GVRHRVIQRPVLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGYWEEKYRPTSGK 486
G R ++ + ++F + +A+VG SG+GK+TL R++LG ++ PTSG
Sbjct: 296 GAPWRRVESRAVDGVSFRLPRASTLAIVGESGSGKSTLARMVLGLLQ--------PTSGT 347
Query: 487 IEVPKNAKVSVLIPGEI------------------EPEFGSETILE------HVYRKIRD 522
+ V L ++ +P + +E HV + +
Sbjct: 348 VVFDGTYDVGALARDQVLAFRRRVQPVFQNPYSSLDPMYSVFRAIEEPLRVHHVGDRRQR 407
Query: 523 LNAAVEVLNRAGLSDAVLYRAKFSELSTGQKERAKIASLLAERPNVLLIDEFAAHLDTLT 582
A E++++ L ++L R ELS GQ++R IA LA RP VL+ DE + LD L
Sbjct: 408 QRAVRELVDQVALPSSILGRRP-RELSGGQRQRVAIARALALRPEVLVCDEAVSALDVLV 466
Query: 583 AMRVARKVSEIVREAGITAVIITHRPEVVKALDPDKVLFVGYGTVIVRKS 632
++ ++++ + G+T + I+H V++ + D VL + G V+ S
Sbjct: 467 QAQILDLLADLQADLGLTYLFISHDLAVIRQI-ADDVLVMRAGRVVEHAS 515
>pir||JE0248 ATP-binding cassette half-transporter - rat
>gi|2982567|emb|CAA05793.1| (AJ003004) ABC transporter
[Rattus norvegicus]
Length = 836
Score = 75.3 bits (182), Expect = 2e-12
Identities = 58/215 (26%), Positives = 113/215 (51%), Gaps = 31/215 (14%)
Query: 435 RPVLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGYWEEKYRPTSGKI-----EV 489
R L++++FT+ PG+ VA+VG SGAGK+T+LRL+ Y +SG I ++
Sbjct: 603 RETLQDVSFTVMPGQTVALVGPSGAGKSTILRLLF--------RFYDISSGCIRIDGQDI 654
Query: 490 PKNAKVSVLIPGEIEPE---FGSETILEHV-YRKIRDLNAAVE-VLNRAGLSDAVL---- 540
+ ++S+ + P+ ++TI ++ Y ++ ++ ++ AG+ DA+L
Sbjct: 655 SQVTQISLRSHIGVVPQDTVLFNDTIANNIRYGRVTAGDSEIQAAAQAAGIHDAILSFPE 714
Query: 541 -YRAKFSE----LSTGQKERAKIASLLAERPNVLLIDEFAAHLDTLTAMRVARKVSEIVR 595
Y + E LS G+K+R IA + + P+++L+DE + LDT + ++++
Sbjct: 715 GYETQVGERGLKLSGGEKQRVAIARTILKAPDIILLDEATSALDTSNERAIQASLAKVCT 774
Query: 596 EAGITAVIITHRPEVVKALDPDKVLFVGYGTVIVR 630
T +++ HR V ++ D++L + G +I R
Sbjct: 775 NR--TTIVVAHRLSTV--VNADQILVIKDGCIIER 805
>gb|AAD29692.1|AF135793_1 (AF135793) sister of P-glycoprotein [Fundulus heteroclitus]
Length = 765
Score = 75.3 bits (182), Expect = 2e-12
Identities = 63/210 (30%), Positives = 99/210 (47%), Gaps = 33/210 (15%)
Query: 437 VLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGYWEEKYRPTSGKIEVPKNAKVS 496
VL LN ++ PG+ +A VG+SG GK+T +L+ E Y P GK+ + +
Sbjct: 539 VLNGLNVSVRPGQTLAFVGSSGCGKSTSAQLL--------ERFYDPDHGKVLIDGHESTR 590
Query: 497 VLIP------GEI--EPEFGSETILEHV-----YRKIRDLNAAVEVLNRAGLSDAVL--- 540
V +P G + EP +I E++ R+I +N + +A L D V+
Sbjct: 591 VSVPFLRSKIGIVSQEPVLFDCSIAENIKYGDNLREI-SMNEVISAAKKAQLHDFVMSLP 649
Query: 541 --YRAKF----SELSTGQKERAKIASLLAERPNVLLIDEFAAHLDTLTAMRVARKVSEIV 594
Y A S+LS GQK+R IA + P +LL+DE + LDT + V + +
Sbjct: 650 EKYDANVGSQGSQLSRGQKQRIAIARAIIRDPKILLLDEATSALDTESEKTVQEALDK-- 707
Query: 595 REAGITAVIITHRPEVVKALDPDKVLFVGY 624
R G T ++I HR ++ D V+ G+
Sbjct: 708 RREGRTCIVIAHRLSTIQNSDIIAVMSRGF 737
>gb|AAD41366.1|AF151698_3 (AF151698) GlnP/GlnQ homolog [Agrobacterium tumefaciens]
Length = 502
Score = 75.3 bits (182), Expect = 2e-12
Identities = 70/237 (29%), Positives = 115/237 (47%), Gaps = 32/237 (13%)
Query: 408 SELDIKGLPQEIQDLLKAFGVRHRVIQRPVLRNLNFTINPGEVVAVVGASGAGKTTLLRL 467
S + KG +++ L A+G VL+ ++ ++ PG V ++G SG+GK+TLLR
Sbjct: 257 SGVAFKGGSLDVRRLGMAYG------DLDVLKGVDLSVKPGSVTCIIGPSGSGKSTLLRG 310
Query: 468 ILGAIKGYWEEKYRPTSGKIEV---------PKNAKVSVLIPGEIEPEFGSETILEHV-- 516
+ ++ P SG I + P+ + V + + F T LE+V
Sbjct: 311 LNRLVE--------PKSGDILIDGESILAMKPETLRRRVGMVFQHFNLFPDHTALENVML 362
Query: 517 -YRKIRDLNAA-VEVLNRAGLSDAVLYRAKFSE---LSTGQKERAKIASLLAERPNVLLI 571
+KI+ L AA E + +AGL+D L + LS GQ++R IA LA P V+L
Sbjct: 363 SLKKIKGLPAAEAERIAKAGLADVGLASRQHHRPGGLSGGQQQRVAIARALAMEPEVILF 422
Query: 572 DEFAAHLDTLTAMRVARKVSEIVREAGITAVIITHRPEVVKALDPDKVLFVGYGTVI 628
DE + LD V ++E+ G+T V++TH + + D+V+F+ G V+
Sbjct: 423 DEVTSALDPELVKGVLNLMAEL-GTRGMTMVVVTHEMGFARRV-ADQVVFMDEGRVV 477
>pir||H81391 amino-acid ABC transporter ATP-binding protein Cj0469 [imported] -
Campylobacter jejuni (strain NCTC 11168)
>gi|6967940|emb|CAB75107.1| (AL139075) amino-acid ABC
transporter ATP-binding protein [Campylobacter jejuni]
Length = 253
Score = 75.3 bits (182), Expect = 2e-12
Identities = 70/231 (30%), Positives = 106/231 (45%), Gaps = 38/231 (16%)
Query: 418 EIQDLLKAFGVRHRVIQRPVLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGYWE 477
+I++L K +G H L+++N + EVV ++G SG GK+TLLR I G E
Sbjct: 5 KIENLQKYYGSHH------ALKDINLEVKAKEVVVILGPSGCGKSTLLRCINGL-----E 53
Query: 478 EKYRPTSGKI-----EVPKNAKVSVLIPGEIEPEFGSETILEHVYRKIRDLNAAVEVLNR 532
E SG I ++ K+ K + ++ F S + EH+ + L ++V R
Sbjct: 54 E---IASGNIYIDNEKIDKDFKEWPRMRQKVGMVFQSYELFEHLSVEENILLGPMKVQKR 110
Query: 533 AGLSDAVLYRAKF---------------SELSTGQKERAKIASLLAERPNVLLIDEFAAH 577
D VL AK ELS GQK+R I L P ++L DE A
Sbjct: 111 K--KDEVLKEAKIWLEKVGLLHKIHAYPRELSGGQKQRIAIVRSLCMNPELMLFDEVTAA 168
Query: 578 LDTLTAMRVARKVSEIVREAGITAVIITHRPEVVKALDPDKVLFVGYGTVI 628
LD V + + +E G+T +I+TH KA+ DK++F+ G +I
Sbjct: 169 LDPEIVREVLEVMLNLAKE-GMTMLIVTHEMGFAKAV-ADKIIFMDEGKII 217
>gb|AAG26952.1|AC069471_13 (AC069471) P-glycoprotein, putative [Arabidopsis thaliana]
Length = 1245
Score = 75.3 bits (182), Expect = 2e-12
Identities = 70/261 (26%), Positives = 122/261 (45%), Gaps = 56/261 (21%)
Query: 384 KPSYGKVEMLEGPIVFKNVTKVFESELDIKGLPQEIQDLLKAFGVRHRVIQRPVLRNLNF 443
+P+ V ++G I F+NV+ V+ + +I + +NLN
Sbjct: 991 QPNSRMVSQVKGDIEFRNVSFVYPTRPEID-----------------------IFKNLNL 1027
Query: 444 TINPGEVVAVVGASGAGKTTLLRLILGAIKGYWEEKYRPTSGKIEVP-KNAKV------- 495
++ G+ +AVVG SG+GK+T++ LI+ Y P++G + + ++ K
Sbjct: 1028 RVSAGKSLAVVGPSGSGKSTVIGLIM--------RFYDPSNGNLCIDGQDIKTLNLRSLR 1079
Query: 496 SVLIPGEIEPEFGSETILEHVYRKIRDLNAA-VEVLNRAGLSDAVLYRAKFSE------- 547
L + EP S TI E++ K + NA+ E++ A ++A + K E
Sbjct: 1080 KKLALVQQEPALFSTTIYENI--KYGNENASEAEIMEAAKAANAHEFIIKMEEGYKTHAG 1137
Query: 548 -----LSTGQKERAKIASLLAERPNVLLIDEFAAHLDTLTAMRVARKVSEIVREAGITAV 602
LS GQK+R IA + + P+VLL+DE + LDT + V + ++++ G T V
Sbjct: 1138 DKGVQLSGGQKQRVAIARAVLKDPSVLLLDEATSALDTSSEKLVQEALDKLMK--GRTTV 1195
Query: 603 IITHRPEVVKALDPDKVLFVG 623
++ HR ++ D VL G
Sbjct: 1196 LVAHRLSTIRKADTVAVLHKG 1216
>gb|AAG34709.1|AF320001_2 (AF320001) putative ATP binding protein of ABC transporter
[Acinetobacter sp. BD413]
Length = 228
Score = 74.9 bits (181), Expect = 3e-12
Identities = 62/223 (27%), Positives = 108/223 (47%), Gaps = 40/223 (17%)
Query: 418 EIQDLLKAFGVRHRVIQRPVLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGYWE 477
E +D+ K F ++ V++ L+ I GE V++VGASG+GK+TLL ILG +
Sbjct: 7 EAKDVYKHFTDGKSTVE--VIKGLSLKIAAGEFVSIVGASGSGKSTLLH-ILGGLD---- 59
Query: 478 EKYRPTSGKIEVPKNAKVSVLIPGEIEPEFGSETILEHVYR------------------- 518
+PT G++ + + ++ GE E F L VY+
Sbjct: 60 ---QPTQGQVFLNEQRFDNL---GEAERGFKRNQYLGFVYQFHHLLPEFSALENVAMPLM 113
Query: 519 -----KIRDLNAAVE-VLNRAGLSDAVLYRAKFSELSTGQKERAKIASLLAERPNVLLID 572
+++ E +L+R GLS + ++ ELS G+++R +A L RP V+L D
Sbjct: 114 LRADTNYKEVKQQAEHLLDRVGLSHRLTHKP--GELSGGERQRVALARALVARPAVMLAD 171
Query: 573 EFAAHLDTLTAMRVARKVSEIVREAGITAVIITHRPEVVKALD 615
E +LD TA + +S++ +E + +I+TH ++ ++ D
Sbjct: 172 EPTGNLDRKTAFGIFELLSDLKQEFNMAMLIVTHDEQLAQSAD 214
>sp|P36372|TAP2_RAT ANTIGEN PEPTIDE TRANSPORTER 2 (APT2) >gi|111976|pir||S19603 mtp 2
protein - rat >gi|56719|emb|CAA45339.1| (X63854) mtp2a
[Rattus norvegicus] >gi|228306|prf||1802394A MHC-linked
transporter [Rattus norvegicus] >gi|228757|prf||1810434A
MHC-linked transporter mtp2 [Rattus sp.]
Length = 703
Score = 74.9 bits (181), Expect = 3e-12
Identities = 66/236 (27%), Positives = 115/236 (47%), Gaps = 38/236 (16%)
Query: 418 EIQDLLKAFGVRHRVIQRPVLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGYWE 477
E QD+ ++ R ++PVL+ L FT++PG+V A+VG +G+GK+T+ L+ +
Sbjct: 469 EFQDVSFSYPSRP---EKPVLQGLTFTLHPGKVTALVGPNGSGKSTVAALL--------Q 517
Query: 478 EKYRPTSGKIEVPKNAKV---------SVLIPGEIEPEFGSETILEHVYRKIRDL-NAAV 527
Y+PT G++ + V V++ G+ EP S ++ +++ +RD +A V
Sbjct: 518 NLYQPTGGQLLLDGEPLVQYDHHYLHRQVVLVGQ-EPVLFSGSVKDNIAYGLRDCEDAQV 576
Query: 528 EVLNRAGLSDAVL----------YRAKFSELSTGQKERAKIASLLAERPNVLLIDEFAAH 577
+A +D + K S+L+ GQK+R IA L P VL++DE +
Sbjct: 577 MAAAQAACADDFIGEMTNGINTEIGEKGSQLAVGQKQRLAIARALVRNPRVLILDEATSA 636
Query: 578 LDTLTAMRVARKVSEIVREAGITAVIITHRPEVVKALDPDKVLFVGYGTVIVRKSL 633
LD + S+ R T ++I HR V+ + D+VL + G ++ L
Sbjct: 637 LDAECEQALQTWRSQEDR----TMLVIAHRLHTVQ--NADQVLVLKQGQLVEHDQL 686
>pir||B71077 probable ABC transporter ATP-binding protein - Pyrococcus
horikoshii >gi|3257293|dbj|BAA29976.1| (AP000004) 237aa
long hypothetical ABC transporter ATP-binding protein
[Pyrococcus horikoshii]
Length = 237
Score = 74.9 bits (181), Expect = 3e-12
Identities = 57/215 (26%), Positives = 105/215 (48%), Gaps = 25/215 (11%)
Query: 428 VRHRVIQRPVLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGYWEEKYRPTSGKI 487
V +RV R ++ +N G +++G +GAGK+T+ +++G +K P+ G++
Sbjct: 7 VTYRVDGRRIIERINMRFKEGMTYSILGPNGAGKSTIAYILMGVMK--------PSEGRV 58
Query: 488 ----------EVPKNAKVSVLIPGEIEPEFGSETILEHVY--RKIR-DLNAAVEVLNRAG 534
+ + A++ + + + + T+ +++ KI+ D N E+L G
Sbjct: 59 LLDGDDITNLSITERARLGITLLWQEPARYDGITVEKYLTLGGKIKVDKNEMREILELVG 118
Query: 535 LS-DAVLYRAKFSELSTGQKERAKIASLLAERPNVLLIDEFAAHLDTLTAMRVARKVSEI 593
L + +R LS G+++R ++AS+L RP ++DE + LD +TA + V E
Sbjct: 119 LPYELYAHRFVDKSLSGGERKRIELASILMLRPRYAILDEPDSGLD-ITAGELIENVLEY 177
Query: 594 VREAGITAVIITHRPEVVKALDPDKVLFVGYGTVI 628
R G T ++ITH E+ A D FV G +I
Sbjct: 178 FRRVGTTVILITHHEEI--AAKTDFAYFVCAGRII 210
>gb|AAF65552.1|AF249879_1 (AF249879) liver bile salt export pump [Oryctolagus cuniculus]
Length = 1321
Score = 74.9 bits (181), Expect = 3e-12
Identities = 68/247 (27%), Positives = 107/247 (42%), Gaps = 54/247 (21%)
Query: 389 KVEMLEGPIVFKNVTKVFESELDIKGLPQEIQDLLKAFGVRHRVIQRPVLRNLNFTINPG 448
K+E ++G I F NVT + S ++K +L NL+ I PG
Sbjct: 412 KLERIKGEIEFHNVTFHYPSRPEVK-----------------------ILNNLSMVIKPG 448
Query: 449 EVVAVVGASGAGKTTLLRLILGAIKGYWEEKYRPTSGKIEVPKNAKVSVLIP------GE 502
E+ A+VG SGAGK+T L+LI Y PT G + V + S I G
Sbjct: 449 EMTALVGPSGAGKSTALQLI--------HRFYGPTEGMVTVESHDIRSSHIQWLRNQIGI 500
Query: 503 IEPE-------------FGSE-TILEHVYRKIRDLNAAVEVLNRAGLSDAVLYRAKFSEL 548
+E E +G E +E + + ++ NA +++ D ++ ++
Sbjct: 501 VEQEPVLFFHTIAEKIRYGREDATMEDLIQAAKEANAYNFIMDLPQQFDTLVGEGG-GQM 559
Query: 549 STGQKERAKIASLLAERPNVLLIDEFAAHLDTLTAMRVARKVSEIVREAGITAVIITHRP 608
S GQK+R IA L P +LL+D + LD + V +S+ + G T V + HRP
Sbjct: 560 SGGQKQRVAIARALIRNPKILLLDMATSALDNESEAMVQEALSK--TQHGHTIVSVAHRP 617
Query: 609 EVVKALD 615
++ D
Sbjct: 618 ATIRTAD 624
>sp|P77279|YBBL_ECOLI HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PROTEIN YBBL
>gi|7430366|pir||A64780 probable ABC ransport protein
ybbL - Escherichia coli >gi|1773172|gb|AAB40244.1|
(U82664) hypothetical protein [Escherichia coli]
>gi|1786698|gb|AAC73592.1| (AE000155) putative
ATP-binding component of a transport system [Escherichia
coli K12]
Length = 225
Score = 74.5 bits (180), Expect = 3e-12
Identities = 61/215 (28%), Positives = 97/215 (44%), Gaps = 27/215 (12%)
Query: 417 QEIQDLLKAFGVRHRVIQRPVLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGYW 476
QE LL+ V + +L N+NF++ GE + G SG GK+TLL+++ I
Sbjct: 2 QENSPLLQLQNVGYLAGDAKILNNINFSLRAGEFKLITGPSGCGKSTLLKIVASLIS--- 58
Query: 477 EEKYRPTSGKIEVPKNAKVSVLIPGEI----------EPEFGSETILEH------VYRKI 520
PTSG + + + VS L P EI P +T+ ++ + +
Sbjct: 59 -----PTSGTL-LFEGEDVSTLKP-EIYRQQVSYCAQTPTLFGDTVYDNLIFPWQIRNRQ 111
Query: 521 RDLNAAVEVLNRAGLSDAVLYRAKFSELSTGQKERAKIASLLAERPNVLLIDEFAAHLDT 580
D ++ L R L D++L + +ELS G+K+R + L P VLL+DE + LD
Sbjct: 112 PDPAIFLDFLERFALPDSILTK-NIAELSGGEKQRISLIRNLQFMPKVLLLDEITSALDE 170
Query: 581 LTAMRVARKVSEIVREAGITAVIITHRPEVVKALD 615
V + VRE I + +TH + + D
Sbjct: 171 SNKHNVNEMIHRYVREQNIAVLWVTHDKDEINHAD 205
>sp|P38053|SSUB_ECOLI PUTATIVE ALIPHATIC SULFONATES TRANSPORT ATP-BINDING PROTEIN SSUB
>gi|7445682|pir||D64833 probable ABC-type transport
protein ycbE - Escherichia coli
>gi|1787164|gb|AAC74019.1| (AE000195) putative
ATP-binding component of a transport system [Escherichia
coli K12] >gi|4062499|dbj|BAA35685.1| (D90731)
Hypothetical abc transporter ATP-binding protein in pepN
3'region . [Escherichia coli]
>gi|4062501|dbj|BAA35688.1| (D90732) Hypothetical abc
transporter ATP-binding protein in pepN 3'region .
[Escherichia coli] >gi|4583570|emb|CAB40393.1|
(AJ237695) putative aliphatic sulfonate transport
ATP-binding protein [Escherichia coli]
Length = 255
Score = 74.5 bits (180), Expect = 3e-12
Identities = 61/195 (31%), Positives = 93/195 (47%), Gaps = 13/195 (6%)
Query: 437 VLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGYWEEKYRPTSGKIEVPKNAKVS 496
VL L+ I G+ VAVVG SG GK+TLLRL+ G + T+ E+ ++ ++
Sbjct: 26 VLNQLDLHIPAGQFVAVVGRSGGGKSTLLRLLAGLETPTAGDVLAGTTPLAEIQEDTRMM 85
Query: 497 V----LIPGEIEPEFGSETILEHVYRKIRDLNAAVEVLNRAGLSDAVLYRAKFSELSTGQ 552
L+P + + + R AAV + NRAG A L S GQ
Sbjct: 86 FQDARLLPWKSVIDNVGLGLKGQWRDAARRALAAVGLENRAGEWPAAL--------SGGQ 137
Query: 553 KERAKIASLLAERPNVLLIDEFAAHLDTLTAMRVARKVSEIVREAGITAVIITHRPEVVK 612
K+R +A L RP +LL+DE LD LT + + + + +E G T +++TH
Sbjct: 138 KQRVALARALIHRPGLLLLDEPLGALDALTRLEMQDLIVSLWQEHGFTVLLVTHDVSEAV 197
Query: 613 ALDPDKVLFVGYGTV 627
A+ D+VL + G +
Sbjct: 198 AM-ADRVLLIEEGKI 211
>gb|AAC18099.1| (AF058302) ATPase component of putative ABC transporter
[Streptomyces roseofulvus]
Length = 524
Score = 74.5 bits (180), Expect = 3e-12
Identities = 61/204 (29%), Positives = 96/204 (46%), Gaps = 20/204 (9%)
Query: 420 QDLLKAFGVRHRVIQRPVLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGYWEEK 479
+DL+K + R ++ + + FT+ GE A+VG SG+GK+T RL+ G
Sbjct: 285 RDLVKEYRRDGRRVR--AVDGVGFTVREGEFFALVGESGSGKSTTARLVTGLTA------ 336
Query: 480 YRPTSGKIE---VPKNAKVSVLIP-GEIEPEFGSETILEHVYRK-----IRDLNAAVEVL 530
PTSG +E P ++ P +P + I+E R R E+L
Sbjct: 337 --PTSGAVEHAPAPVRPQLVQQSPYAAFDPRWTVRRIVEEPLRARHVPGARRRARLRELL 394
Query: 531 NRAGLSDAVLYRAKFSELSTGQKERAKIASLLAERPNVLLIDEFAAHLDTLTAMRVARKV 590
GL + +L R ELS GQ++R +A LA P +L+ E A LD + RV +
Sbjct: 395 ALVGLDEELLARRP-RELSGGQRQRVALARALAPEPRLLVCGEPVAALDPVARERVVHLL 453
Query: 591 SEIVREAGITAVIITHRPEVVKAL 614
+ E G+T + ++H +VV+ L
Sbjct: 454 ERLRAELGLTCLFVSHELDVVRRL 477
>gb|AAC64256.1| (AF042861) putative OppF [Treponema denticola]
Length = 385
Score = 74.5 bits (180), Expect = 3e-12
Identities = 58/201 (28%), Positives = 96/201 (46%), Gaps = 19/201 (9%)
Query: 441 LNFTINPGEVVAVVGASGAGKTTLLRLILGAIK--------------GYWEEKYRPTSGK 486
++ I+ GE V +VG SG GK+TL R IL K Y + P K
Sbjct: 91 IDLVIHEGETVGLVGESGCGKSTLGRTILKLYKPTAGEIFFEGENITNYTVTQMMPLRKK 150
Query: 487 IEVPKNAKVSVLIPGEIEPEFGSETILEHVYRKIRDL---NAAVEVLNRAGLSDAVLYRA 543
+++ S L P + E +LEH K +D E++N GL+D ++YR
Sbjct: 151 MQIIFQDPYSSLNPKMTVGQIIGEALLEHGMFKKKDPAYEKYVKEIMNTCGLADYMIYRY 210
Query: 544 KFSELSTGQKERAKIASLLAERPNVLLIDEFAAHLDTLTAMRVARKVSEIVREAGITAVI 603
E S GQ++R IA LA +P ++ DE + LD ++ ++++ +E ++ +
Sbjct: 211 PH-EFSGGQRQRIGIARALALKPKFIVCDEAVSALDVSIQSQIINLLNDLQKEFNLSYLF 269
Query: 604 ITHRPEVVKAL-DPDKVLFVG 623
I+H VVK + D V+++G
Sbjct: 270 ISHDLSVVKHISDRIGVMYLG 290
>emb|CAB69727.1| (AL137166) putative metal transport ABC transporter [Streptomyces
coelicolor A3(2)]
Length = 256
Score = 74.5 bits (180), Expect = 3e-12
Identities = 59/200 (29%), Positives = 97/200 (48%), Gaps = 18/200 (9%)
Query: 420 QDLLKAFGVRHRVIQRPVLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIK------ 473
+ ++ GVR + RPVLR ++ T+ G+VVA++GA+G+GK+T +R I+G +
Sbjct: 4 ESVISLRGVRAELGSRPVLRGIDLTVRRGQVVALLGANGSGKSTAVRTIIGQVPVTAGEI 63
Query: 474 ---GYWEEKYRPTSGKIEVPKNAKVSVLIPGEIEPEFGSETILEHVYRKIR--DLNAAVE 528
G ++R + VP+ + +P + S + + +R D A
Sbjct: 64 ELFGTPRRRFRDWARVGYVPQRTTAAGGVPATVTEVVSSGRLSRARFGVLRKADHEAVRR 123
Query: 529 VLNRAGLSDAVLYRAKFS--ELSTGQKERAKIASLLAERPNVLLIDEFAAHLDTLTAMRV 586
L G++D RAK S LS GQ +R IA LA P +L++DE A +D L + V
Sbjct: 124 ALGLVGMAD----RAKDSVNALSGGQHQRVLIARALAAEPELLIMDEPMAGVD-LASQEV 178
Query: 587 ARKVSEIVREAGITAVIITH 606
+ AG T +++ H
Sbjct: 179 LAETLRGQVAAGTTVLLVLH 198
>gb|AAA93553.1| (L23922) P-glycoprotein 5 [Entamoeba histolytica]
Length = 1301
Score = 74.1 bits (179), Expect = 4e-12
Identities = 61/210 (29%), Positives = 105/210 (49%), Gaps = 34/210 (16%)
Query: 437 VLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGYWEEKYRPTSGKIEVP----KN 492
VL+ ++F + G+ +A+VGASG GK+T ++L+ E Y PTSG++ + K+
Sbjct: 1073 VLKGISFKADQGKTIALVGASGCGKSTTIQLV--------ERFYDPTSGEVLLDGYNIKD 1124
Query: 493 AKVSVL-----IPGEIEPEFGSETILEHVYRKIRD--------LNAAVEVLNRAGLSDAV 539
V L + G+ EP +E++++++ R + + + AA ++ N A+
Sbjct: 1125 LNVKFLRNQIGLVGQ-EPVLFAESVIDNIKRGVPEGVEVSNEQIYAAAKMANAHDFISAM 1183
Query: 540 ------LYRAKFSELSTGQKERAKIASLLAERPNVLLIDEFAAHLDTLTAMRVARKVSEI 593
+ + S+LS GQK+R IA L P VLL+DE + LDT + V + +
Sbjct: 1184 PEGYNTMVGDRGSQLSGGQKQRIAIARALIRNPKVLLLDEATSALDTQSEKIVQDALDKA 1243
Query: 594 VREAGITAVIITHRPEVVKALDPDKVLFVG 623
+ G T +II HR ++ D V+ G
Sbjct: 1244 SK--GRTTIIIAHRLSTIQNADQICVIMRG 1271
>pir||A49933 proteinase SM transporter PrtD - Serratia marcescens
>gi|452928|gb|AAB28772.1| (S67013) protease SM
transporter, PrtD SM transporter=inner membrane
metalloprotease transporter [Serratia marcescens, 365,
Peptide, 576 aa]
Length = 576
Score = 74.1 bits (179), Expect = 4e-12
Identities = 59/198 (29%), Positives = 98/198 (48%), Gaps = 21/198 (10%)
Query: 436 PVLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGYWEEKYRPTSGKIEVPKNAKV 495
PVL ++F + GEV+ V+GASG+GKT L+R ++GA+ P SG +
Sbjct: 337 PVLHGVSFRLEAGEVLGVIGASGSGKTLLMRQLVGAL--------TPISGDGGAEQLGPH 388
Query: 496 SVLIPGEIEPEFGSETILEHVYRKIR-DLNAAVEVLNRAGLSDAVLYRAKFSE------- 547
+P +I+ G T+ +++ R + D V AG+ +L+ K E
Sbjct: 389 IGYLPQDIQLFAG--TLTDNIARFGQVDAEKVVAAAALAGVHQLILHLPKGYETELGEGG 446
Query: 548 --LSTGQKERAKIASLLAERPNVLLIDEFAAHLDTLTAMRVARKVSEIVREAGITAVIIT 605
LS GQ++R +A L P ++++DE A+LD + R + E ++ G T V++T
Sbjct: 447 SGLSGGQRQRVALARALYGSPALVVLDEPNANLDREGEEALQRAI-EALKARGNTIVLVT 505
Query: 606 HRPEVVKALDPDKVLFVG 623
H+P ++ D VL G
Sbjct: 506 HKPAILATTDKLLVLTAG 523
>pir||T48672 ABC-type transport system ATP-binding protein hasD [validated] -
Serratia marcescens >gi|1885340|emb|CAA57069.1| (X81195)
hasD [Serratia marcescens]
Length = 586
Score = 74.1 bits (179), Expect = 4e-12
Identities = 59/198 (29%), Positives = 98/198 (48%), Gaps = 21/198 (10%)
Query: 436 PVLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGYWEEKYRPTSGKIEVPKNAKV 495
PVL ++F + GEV+ V+GASG+GKT L+R ++GA+ P SG +
Sbjct: 347 PVLHGVSFRLEAGEVLGVIGASGSGKTLLMRQLVGAL--------TPISGDGGAEQLGPH 398
Query: 496 SVLIPGEIEPEFGSETILEHVYRKIR-DLNAAVEVLNRAGLSDAVLYRAKFSE------- 547
+P +I+ G T+ +++ R + D V AG+ +L+ K E
Sbjct: 399 IGYLPQDIQLFAG--TLTDNIARFGQVDAEKVVAAAALAGVHQLILHLPKGYETELGEGG 456
Query: 548 --LSTGQKERAKIASLLAERPNVLLIDEFAAHLDTLTAMRVARKVSEIVREAGITAVIIT 605
LS GQ++R +A L P ++++DE A+LD + R + E ++ G T V++T
Sbjct: 457 SGLSGGQRQRVALARALYGSPALVVLDEPNANLDREGEEALQRAI-EALKARGNTIVLVT 515
Query: 606 HRPEVVKALDPDKVLFVG 623
H+P ++ D VL G
Sbjct: 516 HKPAILATTDKLLVLTAG 533
>pir||E75120 hypothetical protein PAB1855 - Pyrococcus abyssi (strain Orsay)
>gi|5458189|emb|CAB49678.1| (AJ248285) hypothetical
protein [Pyrococcus abyssi]
Length = 247
Score = 74.1 bits (179), Expect = 4e-12
Identities = 56/217 (25%), Positives = 103/217 (46%), Gaps = 26/217 (11%)
Query: 422 LLKAFGVRHRVIQRPVLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGYWEEKYR 481
+LK + V R +LR +N +N GE ++G +G+GK+TL I G KY+
Sbjct: 1 MLKIEDLHVEVEGREILRGINLAVNDGEFHVIMGPNGSGKSTLALTIAG------HPKYK 54
Query: 482 PTSGKI----------EVPKNAKVSVLIPGEIEPEFGSETILEHVYRKIRDL------NA 525
T GKI + A+ +L+ ++ PE IL+ + + + ++ A
Sbjct: 55 VTKGKIIFNGEDITSSSPDERARKGILLAFQVPPEIEGVRILDFLIQVLTEIKGMKPEEA 114
Query: 526 AVEVLNRA---GLSDAVLYRAKFSELSTGQKERAKIASLLAERPNVLLIDEFAAHLDTLT 582
VLN+A D + R S G+++R ++ L P +LL+DE + +D +
Sbjct: 115 YDVVLNKAKELWFDDKDMRRFVNVGFSGGERKRLELLQALLLEPKLLLLDEPDSGVDVDS 174
Query: 583 AMRVARKVSEIVREAGITAVIITHRPEVVKALDPDKV 619
++RK+ E+ G++ ++ITH + +D +K+
Sbjct: 175 LSVISRKIEEL-HNRGVSIILITHYGRIFGHIDKEKL 210
>emb|CAB76006.1| (AL157916) putative ABC transporter, ATP-binding subunit
[Streptomyces coelicolor A3(2)]
Length = 312
Score = 74.1 bits (179), Expect = 4e-12
Identities = 64/224 (28%), Positives = 106/224 (46%), Gaps = 35/224 (15%)
Query: 418 EIQDLLKAFGVRHRVIQRPVLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGYWE 477
E+ DL K++G RPV+ ++F + GE+ V+G +GAGKTT + + G
Sbjct: 17 EVTDLRKSYG------GRPVVDGVSFAVEEGEIFGVLGPNGAGKTTTVECVEGL------ 64
Query: 478 EKYRPTSGKIEVP---------KNAKV--SVLIPGEIEPEFGSETILE---HVYRKIRDL 523
P +G++ V + A+V + L E++P+ LE Y K D
Sbjct: 65 --RVPDAGRVRVTGLDPVADHRRVAEVLGAQLQQSELQPKLTVREALELYAAFYPKPADW 122
Query: 524 NAAVEVLNRAGLSDAVLYRAKFSELSTGQKERAKIASLLAERPNVLLIDEFAAHLDTLTA 583
E L+ + D +F++LS GQK+R IA L P V+++DE LD A
Sbjct: 123 RPLAERLDLVPMLD-----TRFAKLSGGQKQRLFIALALVGDPRVVVLDELTTGLDP-RA 176
Query: 584 MRVARKVSEIVREAGITAVIITHRPEVVKALDPDKVLFVGYGTV 627
R ++ E +R G+T +++TH E + L D++ + G +
Sbjct: 177 RRETWQLIEDIRAGGVTVLLVTHFMEEAQRL-CDRIAVIDRGRI 219
>pir||S25577 mt2 protein - rat
Length = 703
Score = 73.7 bits (178), Expect = 6e-12
Identities = 65/236 (27%), Positives = 115/236 (48%), Gaps = 38/236 (16%)
Query: 418 EIQDLLKAFGVRHRVIQRPVLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGYWE 477
E QD+ ++ R ++PVL+ L FT++PG+V A+VG +G+GK+T+ L+ +
Sbjct: 469 EFQDVSFSYPSRP---EKPVLQGLTFTLHPGKVTALVGPNGSGKSTVAALL--------Q 517
Query: 478 EKYRPTSGKIEVPKNAKV---------SVLIPGEIEPEFGSETILEHVYRKIRDL-NAAV 527
Y+PT G++ + V V++ G+ EP S ++ +++ +RD +A V
Sbjct: 518 NLYQPTGGQLLLDGEPLVQYDHHYLHRQVVLVGQ-EPVLFSGSVKDNIAYGLRDCEDAQV 576
Query: 528 EVLNRAGLSDAVL----------YRAKFSELSTGQKERAKIASLLAERPNVLLIDEFAAH 577
+A +D + + S+L+ GQK+R IA L P VL++DE +
Sbjct: 577 MAAAQAACADDFIGEMTNGINTEIGERGSQLAVGQKQRLAIARALVRNPRVLILDEATSA 636
Query: 578 LDTLTAMRVARKVSEIVREAGITAVIITHRPEVVKALDPDKVLFVGYGTVIVRKSL 633
LD + S+ R T ++I HR V+ + D+VL + G ++ L
Sbjct: 637 LDAECEQALQTWRSQEDR----TMLVIAHRLHTVQ--NADQVLVLKQGQLVEHDQL 686
>gb|AAA50516.1| (M77784) transport protein [Agrobacterium tumefaciens]
Length = 262
Score = 73.7 bits (178), Expect = 6e-12
Identities = 68/233 (29%), Positives = 116/233 (49%), Gaps = 33/233 (14%)
Query: 418 EIQDLLKAFGVRHRVIQRPVLRNLNFTINPGEVVAVVGASGAGKTTLLRLI-------LG 470
+++D+ K FG VL ++ + N GEV++++G+SG+GK+TLLR + G
Sbjct: 10 QLKDIRKNFG------NLEVLHGVSLSANEGEVISILGSSGSGKSTLLRCVNMLEVPNAG 63
Query: 471 AIKGYWEE-KYRPTSGKIEVPKNAKVSVLIPGEIEPEF------GSETILEH-----VYR 518
++ EE +G++ PK+ K + F +TIL++ V+
Sbjct: 64 SVAIMGEEIALEHRAGRLARPKDLKQVNRLRERAAMVFQGFNLWSHQTILQNVMEAPVHV 123
Query: 519 KIRDLNA----AVEVLNRAGLSDAVLYRAKFSELSTGQKERAKIASLLAERPNVLLIDEF 574
+ RD A A +L R G++ A SELS GQ++RA IA LA RP+V+L DE
Sbjct: 124 QGRDRKACRDEAEALLERVGIAPNA--NAYPSELSGGQQQRAAIARALAMRPDVMLFDEP 181
Query: 575 AAHLDTLTAMRVARKVSEIVREAGITAVIITHRPEVVKALDPDKVLFVGYGTV 627
+ LD V + + ++ E G T +I+TH + + + + +F+ G +
Sbjct: 182 TSALDPELVGEVLKVMRDLAAE-GRTMLIVTHEMDFARDVS-SRTVFLHQGVI 232
>pir||S38400 mt2 protein - rat >gi|407477|emb|CAA53053.1| (X75305) TAP2 [Rattus
norvegicus]
Length = 703
Score = 73.7 bits (178), Expect = 6e-12
Identities = 65/236 (27%), Positives = 115/236 (48%), Gaps = 38/236 (16%)
Query: 418 EIQDLLKAFGVRHRVIQRPVLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGYWE 477
E QD+ ++ R ++PVL+ L FT++PG+V A+VG +G+GK+T+ L+ +
Sbjct: 469 EFQDVSFSYPSRP---EKPVLQGLTFTLHPGKVTALVGPNGSGKSTVAALL--------Q 517
Query: 478 EKYRPTSGKIEVPKNAKV---------SVLIPGEIEPEFGSETILEHVYRKIRDL-NAAV 527
Y+PT G++ + V V++ G+ EP S ++ +++ +RD +A V
Sbjct: 518 NLYQPTGGQLLLDGEPLVQYDHHYLHRQVVLVGQ-EPVLFSGSVKDNIAYGLRDCEDAQV 576
Query: 528 EVLNRAGLSDAVL----------YRAKFSELSTGQKERAKIASLLAERPNVLLIDEFAAH 577
+A +D + + S+L+ GQK+R IA L P VL++DE +
Sbjct: 577 MAAAQAACADDFIGEMTNGINTEIGERGSQLAVGQKQRLAIARALVRNPRVLILDEATSA 636
Query: 578 LDTLTAMRVARKVSEIVREAGITAVIITHRPEVVKALDPDKVLFVGYGTVIVRKSL 633
LD + S+ R T ++I HR V+ + D+VL + G ++ L
Sbjct: 637 LDAECEQALQTWRSQEDR----TMLVIAHRLHTVQ--NADQVLVLKQGQLVEHDQL 686
>emb|CAA67415.1| (X98917) orf4 [Methanopyrus kandleri]
Length = 228
Score = 73.7 bits (178), Expect = 6e-12
Identities = 54/213 (25%), Positives = 101/213 (47%), Gaps = 21/213 (9%)
Query: 422 LLKAFGVRHRVIQRPVLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGYWEEKYR 481
+L+ GV+ R VLR ++ + PGEV + G +G+GK+TLL+++ G + R
Sbjct: 1 MLRVEGVKFSYGDREVLRGVDLEVEPGEVRVLFGPNGSGKSTLLKIVAGIL--------R 52
Query: 482 PTSGKI--------EVPKNAKVSVLIPGE--IEPEFGSETILEHVYRKIR-DLNAAVEVL 530
P G++ ++P + +P + + P E + + + R D + E++
Sbjct: 53 PDEGRVIIGEEDVTDLPPEERHVGYVPQQPALFPHMTVEDNITYSLQNGRGDPDRLDELV 112
Query: 531 NRAGLSDAVLYRAKFSELSTGQKERAKIASLLAERPNVLLIDEFAAHLDTLTAMRVARKV 590
GL + + K ELS G + R +A L P V+L+DE + +D + +
Sbjct: 113 ELLGLKEHL--DRKPDELSGGYQSRVSLARALFSDPKVMLLDEPLSDVDLAVKAGLVPRF 170
Query: 591 SEIVREAGITAVIITHRPEVVKALDPDKVLFVG 623
E+++E GI A+ +TH P + + + +G
Sbjct: 171 REVLKETGIPALYVTHDPWEAERIGDSFTVLIG 203
>pir||T04251 P-glycoprotein 2 - Arabidopsis thaliana >gi|2108252|emb|CAA71277.1|
(Y10228) P-glycoprotein-2 [Arabidopsis thaliana]
>gi|2108254|emb|CAA71276.1| (Y10227) P-glycoprotein-2
[Arabidopsis thaliana] >gi|4538925|emb|CAB39661.1|
(AL049483) P-glycoprotein-2 (pgp2) [Arabidopsis
thaliana] >gi|7269447|emb|CAB79451.1| (AL161564)
P-glycoprotein-2 (pgp2) [Arabidopsis thaliana]
Length = 1233
Score = 73.7 bits (178), Expect = 6e-12
Identities = 62/208 (29%), Positives = 99/208 (46%), Gaps = 33/208 (15%)
Query: 437 VLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGYWEEKYRPTSGKIEVPKNAKVS 496
+ LN I G++VA+VG SG+GK+T++ LI E Y P SG + + N +S
Sbjct: 378 IFDRLNLAIPAGKIVALVGGSGSGKSTVISLI--------ERFYEPISGAVLLDGN-NIS 428
Query: 497 VL----IPGEI-----EPEFGSETILEHVYRKIRDLNAAVEVLNRAGLSDAVLYRAKFSE 547
L + G+I EP + TI E++ +D A E+ A LS+A+ + E
Sbjct: 429 ELDIKWLRGQIGLVNQEPALFATTIRENILYG-KDDATAEEITRAAKLSEAISFINNLPE 487
Query: 548 ------------LSTGQKERAKIASLLAERPNVLLIDEFAAHLDTLTAMRVARKVSEIVR 595
LS GQK+R I+ + + P++LL+DE + LD + V + ++
Sbjct: 488 GFETQVGERGIQLSGGQKQRIAISRAIVKNPSILLLDEATSALDAESEKSVQEALDRVM- 546
Query: 596 EAGITAVIITHRPEVVKALDPDKVLFVG 623
G T V++ HR V+ D V+ G
Sbjct: 547 -VGRTTVVVAHRLSTVRNADIIAVVHEG 573
>pir||T31072 heterocyst differentiation protein HetC - Anabaena sp
>gi|2828798|gb|AAC38130.1| (U55386) HetC [Anabaena
PCC7120]
Length = 1044
Score = 73.7 bits (178), Expect = 6e-12
Identities = 59/217 (27%), Positives = 104/217 (47%), Gaps = 35/217 (16%)
Query: 434 QRPVLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGYWEEKYRPTSGKIEVPKNA 493
+R L+N++F I P + + ++G SG+GK+TL L+ G YRP +G+I + +
Sbjct: 820 ERNALQNISFGIKPQQTIGIIGQSGSGKSTLANLLAGL--------YRPDTGRILIDGHD 871
Query: 494 KVSVLIPGEIEPEFG---------SETILEHVYRKIRDLN--AAVEVLNRAGLSDAVL-- 540
V P + + G S TILE++ ++L+ A+ G D +
Sbjct: 872 MAGV-SPQSLRSQVGLVAQDSFLFSGTILENITLHDQELSLIQAIAAAKLTGAHDFIQAL 930
Query: 541 ---YRAKFSE----LSTGQKERAKIASLLAERPNVLLIDEFAAHLDTLTAMRVARKVSEI 593
Y + E LS GQ+++ IA L P +L++DE + LD + R + +++I
Sbjct: 931 PLGYDTQVGERGFMLSGGQRQKIAIARALVRNPKILILDEATSGLDAESERRFQQNLAQI 990
Query: 594 VREAGITAVIITHRPEVVKALDP----DKVLFVGYGT 626
+E T I++HR V+ D D+ + + +GT
Sbjct: 991 SQER--TTFIVSHRLSTVRYADHIFVIDQGMVIEHGT 1025
>pir||A75083 ATP-binding transport protein PAB1668 - Pyrococcus abyssi (strain
Orsay) >gi|5458478|emb|CAB49966.1| (AJ248286)
ATP-BINDING TRANSPORT PROTEIN [Pyrococcus abyssi]
Length = 315
Score = 73.7 bits (178), Expect = 6e-12
Identities = 65/206 (31%), Positives = 102/206 (48%), Gaps = 35/206 (16%)
Query: 418 EIQDLLKAFGVRHRVIQRPVLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGYWE 477
E ++L K FG R+ V+ NLN + G V +G +GAGKTT ++++ GA+K
Sbjct: 7 ETKELTKFFGKRN------VVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGALK---- 56
Query: 478 EKYRPTSGKI-----EVPKNAKVSVLIPGEIEPE----FGSETILEH-VYR-------KI 520
PT G+I E+P+ +V ++ PE + TI E VY K
Sbjct: 57 ----PTYGEIKIIGMEMPRE-RVKIMRNVGYMPERPLAYDDMTIFEFLVYMGRLLGLPKD 111
Query: 521 RDLNAAVEVLNRAGLSDAVLYRAKFSELSTGQKERAKIASLLAERPNVLLIDEFAAHLDT 580
+ +N A E++ G+ K ELS+GQ++R AS L P +L++DE ++LD
Sbjct: 112 KAVNQARELMAYTGVGRLAFN--KIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDP 169
Query: 581 LTAMRVARKVSEIVREAGITAVIITH 606
L M K+ E+ + +G T I +H
Sbjct: 170 LGRMEFIGKILELAK-SGKTVFISSH 194
>pir||D81435 probable iron-uptake ABC transport system ATP-binding protein
Cj0173c [imported] - Campylobacter jejuni (strain NCTC
11168) >gi|6967666|emb|CAB72656.1| (AL139074) putative
iron-uptake ABC transport system ATP-binding protein
[Campylobacter jejuni]
Length = 302
Score = 73.7 bits (178), Expect = 6e-12
Identities = 63/211 (29%), Positives = 107/211 (49%), Gaps = 16/211 (7%)
Query: 418 EIQDLLKAFGVRHRVIQRPVLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGYWE 477
EI++L K FG + L N+N + GE ++++G SG+GK+TLLR+I K
Sbjct: 4 EIKNLSKNFG------KIQALENINLHVKEGEFLSILGGSGSGKSTLLRIIA---KLEQA 54
Query: 478 EKYRPTSGKIEVPKNAKVSVLIPGEIEPEFGSETILEHVYRKIRDLNAAVEVLNRAGLSD 537
Y S K EV + L P + E + IL +Y K +D N + L + +
Sbjct: 55 SSYDLFSCKGEVALMFQNYALFP-HLNVE---KNILFALYDK-KDKNQILNHLLKTFEIE 109
Query: 538 AVLYRAKFSELSTGQKERAKIASLLAERPNVLLIDEFAAHLDTLTAMRVARKVSEIVREA 597
+ Y+ K E+S GQ +R A +A +LL+DE ++LD + R++ +++
Sbjct: 110 DLRYK-KIDEISGGQAQRVAFARAMARGCKLLLLDEPFSNLDQNLKQDLRRELKKMIENQ 168
Query: 598 GITAVIITHRPEVVKALDPDKVLFVGYGTVI 628
GITA+++TH E + D++ F+ G ++
Sbjct: 169 GITAIMVTHDIEDAYCMS-DQIAFLEKGKIL 198
>pir||G81168 amino acid ABC transporter, ATP-binding protein NMB0696 [imported]
- Neisseria meningitidis (group B strain MD58)
>gi|7225924|gb|AAF41113.1| (AE002424) amino acid ABC
transporter, ATP-binding protein [Neisseria meningitidis
MC58]
Length = 242
Score = 73.7 bits (178), Expect = 6e-12
Identities = 68/207 (32%), Positives = 106/207 (50%), Gaps = 22/207 (10%)
Query: 437 VLRNLNFTINPGEVVAVVGASGAGKTTLLRLI--LGAIKG--YWEEKYRPTSGKIEVPK- 491
V+ +N I GEVV V G SG+GK+TL+R + L +I+ W + K ++ K
Sbjct: 16 VINGVNLEIKKGEVVVVCGPSGSGKSTLIRTVNQLESIESGEIWVDGVNVADPKTDLNKI 75
Query: 492 NAKVSVLIPG-EIEPEFGSETILEHVY---RKIRDLNA------AVEVLNRAGLSDAVLY 541
+V + G + P T+LE++ K++ NA A+E+L R GL A
Sbjct: 76 REEVGFVFQGFNLYPHL---TVLENITLAPMKVKGQNAEQAEKKAMELLERVGL--AHKK 130
Query: 542 RAKFSELSTGQKERAKIASLLAERPNVLLIDEFAAHLDTLTAMRVARKVSEIVREAGITA 601
A S+LS GQ++R IA LA P V+L DE + LD V KV + + E+G+T
Sbjct: 131 DAFPSQLSGGQQQRVAIARGLAMEPRVMLFDEPTSALDPEMVGEVL-KVMKDLAESGMTM 189
Query: 602 VIITHRPEVVKALDPDKVLFVGYGTVI 628
+ +TH + + D+V+FV G ++
Sbjct: 190 MCVTHEMGFAREV-ADRVIFVDKGQIL 215
>gb|AAF71763.1|AF263912_2 (AF263912) NysG [Streptomyces noursei]
Length = 605
Score = 73.7 bits (178), Expect = 6e-12
Identities = 57/213 (26%), Positives = 99/213 (45%), Gaps = 33/213 (15%)
Query: 436 PVLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGYWEEKYRPTSGKIEVPKNAKV 495
P++ NL+ T+ PG VA+VG +GAGKTTL L++ Y P SG+I +
Sbjct: 373 PLIENLSLTVEPGSTVAIVGPTGAGKTTLGNLLM--------RFYEPDSGRI-LLDGTDT 423
Query: 496 SVLIPGEIEPEFG---------SETILEHV-YRKIRDLNAAVEVLNRAGLSDAVLYRA-- 543
+ + ++ FG TI E++ Y A +E RA +D +
Sbjct: 424 ATMTRDDLRSRFGLVLQDTWLFGGTIAENIAYGAPGACRADIEEAARATCADRFIRTLPQ 483
Query: 544 --------KFSELSTGQKERAKIASLLAERPNVLLIDEFAAHLDTLTAMRVARKVSEIVR 595
+ +S G+K+ +A RP VL++DE + +DT T + + R ++ +
Sbjct: 484 GYDTVLDDESGTVSAGEKQLLTVARAFLARPAVLVLDEATSSVDTRTEVLIQRAMNSL-- 541
Query: 596 EAGITAVIITHRPEVVKALDPDKVLFVGYGTVI 628
AG T+ +I HR ++ D D ++ + G ++
Sbjct: 542 RAGRTSFVIAHRLSTIR--DADLIVVMDAGRIV 572
>gb|AAD43626.1|AF071411_1 (AF071411) multidrug resistance protein MDR [Aspergillus nidulans]
>gi|6856159|gb|AAF29805.1|AF173826_1 (AF173826)
ABC-transporter [Aspergillus nidulans]
Length = 1348
Score = 73.4 bits (177), Expect = 7e-12
Identities = 77/282 (27%), Positives = 117/282 (41%), Gaps = 62/282 (21%)
Query: 378 PKEPLWKPSYGKVEMLEGPIVFKNVTKVFESELDIKGLPQEIQDLLKAFGVRHRVIQRPV 437
P+ W K+E +EG I F+NV + + + +PV
Sbjct: 1084 PQIDNWSEEGEKLETVEGEIEFRNVHFRYPTRPE-----------------------QPV 1120
Query: 438 LRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGYWEEKYRPTSGKIEVPK------ 491
LR L+ T+ PG+ VA+VG SG GK+T + L+ E Y +G I V
Sbjct: 1121 LRGLDLTVKPGQYVALVGPSGCGKSTTIALL--------ERFYDAIAGSILVDGKDISKL 1172
Query: 492 --NAKVSVLIPGEIEPEFGSETILEHVYRKIRDLNAAVEVLNRAGLSDAVLY-------- 541
N+ S L EP TI E++ I + + E L +A DA +Y
Sbjct: 1173 NINSYRSFLSLVSQEPTLYQGTIKENILLGIVEDDVPEEFLIKA-CKDANIYDFIMSLPE 1231
Query: 542 ------RAKFSELSTGQKERAKIASLLAERPNVLLIDEFAAHLDTLTAMRVARKVSEIVR 595
+K LS GQK+R IA L P +LL+DE + LD+ + V + R
Sbjct: 1232 GFNTVVGSKGGMLSGGQKQRVAIARALLRDPKILLLDEATSALDSESEKVVQAALDAAAR 1291
Query: 596 EAGITAVIITHR------PEVVKALDPDKVLFVGYGTVIVRK 631
G T + + HR +V+ D K++ G + +V+K
Sbjct: 1292 --GRTTIAVAHRLSTIQKADVIYVFDQGKIVESGTHSELVQK 1331
>pir||T46950 probable ATPase component of 2-aminoethylphosphonate transporter
phnT [imported] - Salmonella typhimurium
>gi|1763082|gb|AAB39645.1| (U69493) PhnT [Salmonella
typhimurium]
Length = 369
Score = 73.4 bits (177), Expect = 7e-12
Identities = 62/209 (29%), Positives = 101/209 (47%), Gaps = 29/209 (13%)
Query: 437 VLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGYWEEKYRPTSGKIEVP------ 490
VL+ L+ TI PGEV+A++G SG+GKTT+LR + G + +P G+I +
Sbjct: 33 VLKPLSLTIEPGEVLALIGPSGSGKTTVLRAVAGFV--------QPAGGRILIGDTDVTH 84
Query: 491 ----KNAKVSVLIPGEIEPEFGSETILEHVYRKIRDLNAAV-----EVLNRAGLSDAVLY 541
K V+ + P E + R + A + + L G+SD Y
Sbjct: 85 LPPYKRGLAMVVQNYALFPHLKVEDNVAFGLRAQKQPKALINERVTQALKTVGMSD---Y 141
Query: 542 RAKF-SELSTGQKERAKIASLLAERPNVLLIDEFAAHLDTLTAMRVARKVSEIVRE-AGI 599
A++ +LS GQ++R IA +A RP VLL+DE + LD + +++ + RE +
Sbjct: 142 AARYPHQLSGGQQQRVAIARAIAVRPRVLLLDEPLSALDAQIRHNMVEEIARLHRELPEL 201
Query: 600 TAVIITHRPEVVKALDPDKVLFVGYGTVI 628
T + +TH L DK+ + G++I
Sbjct: 202 TILYVTHDQTEALTL-ADKIGIMKDGSLI 229
>pir||T45311 cell division atp-binding protein [imported] - Mycobacterium leprae
>gi|2326691|emb|CAB11002.1| (Z98271) cell division
atp-binding protein [Mycobacterium leprae]
Length = 229
Score = 73.4 bits (177), Expect = 7e-12
Identities = 65/206 (31%), Positives = 99/206 (47%), Gaps = 31/206 (15%)
Query: 429 RHRVIQRPVLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGYWEEKYRPTSGKIE 488
+++ + RP L N+N I+ GE V ++G SG+GK+T +RL+LGA PTSG +
Sbjct: 10 KYKSLARPALDNVNVKIDKGEFVFLIGPSGSGKSTFMRLLLGA--------ETPTSGDVR 61
Query: 489 VPK---NAKVSVLIP------GEIEPEF---GSETILEHVY-------RKIRDLNAAV-E 528
V K N IP G + +F +T+ E+V R+ +N V +
Sbjct: 62 VSKFHVNKLPGRHIPRLRQVIGCVFQDFRLLQQKTVYENVAFALEVIGRRSDAINQVVPD 121
Query: 529 VLNRAGLSDAVLYRAKFSELSTGQKERAKIASLLAERPNVLLIDEFAAHLDTLTAMRVAR 588
VL GLS ELS G+++R IA RP VLL DE +LD T+ +
Sbjct: 122 VLETVGLSGKA--NRLPDELSGGEQQRVAIARAFVNRPLVLLADEPTGNLDPDTSKDI-M 178
Query: 589 KVSEIVREAGITAVIITHRPEVVKAL 614
+ E + G T ++ TH +V ++
Sbjct: 179 DLLERINRTGTTVLMATHDHHIVDSM 204
>pir||D69627 cell-division ATP-binding protein ftsE - Bacillus subtilis
>gi|2618833|gb|AAC67262.1| (AF017113) cell division
ATP-binding protein [Bacillus subtilis]
>gi|2636052|emb|CAB15543.1| (Z99122) cell-division
ATP-binding protein [Bacillus subtilis]
Length = 228
Score = 73.4 bits (177), Expect = 7e-12
Identities = 67/234 (28%), Positives = 114/234 (48%), Gaps = 43/234 (18%)
Query: 418 EIQDLLKAF--GVRHRVIQRPVLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGY 475
E++++ KA+ GV+ L ++ TI+PGE V VVG SGAGK+T +++I Y
Sbjct: 3 EMKEVYKAYPNGVK-------ALNGISVTIHPGEFVYVVGPSGAGKSTFIKMI------Y 49
Query: 476 WEEKYRPTSGKI-------------EVP-KNAKVSVLIPG-EIEPEFGSETILEHVYRKI 520
EEK PT G+I E+P K+ V+ ++ P+ T+ E+V +
Sbjct: 50 REEK--PTKGQILINHKDLATIKEKEIPFVRRKIGVVFQDFKLLPKL---TVFENVAFAL 104
Query: 521 RDLNAAVEVLNRAGLSDAVLYRAKF------SELSTGQKERAKIASLLAERPNVLLIDEF 574
+ V+ + L L + K +LS G+++R IA + P+V++ DE
Sbjct: 105 EVIGEQPSVIKKRVLEVLDLVQLKHKARQFPDQLSGGEQQRVSIARSIVNNPDVVIADEP 164
Query: 575 AAHLDTLTAMRVARKVSEIVREAGITAVIITHRPEVVKALDPDKVLFVGYGTVI 628
+LD T+ V + + EI G T V+ TH E+V + +V+ + G ++
Sbjct: 165 TGNLDPDTSWEVMKTLEEI-NNRGTTVVMATHNKEIVNTM-KKRVIAIEDGIIV 216
>gb|AAB88659.1| (U62935) multidrug resistance protein 2 [Aspergillus fumigatus]
>gi|2673957|gb|AAB88660.1| (U62936) multidrug resistance
protein 2 [Aspergillus fumigatus]
Length = 791
Score = 73.4 bits (177), Expect = 7e-12
Identities = 72/262 (27%), Positives = 115/262 (43%), Gaps = 53/262 (20%)
Query: 379 KEPLWKPSYG-KVEMLEGPIVFKNVTKVFESELDIKGLPQEIQDLLKAFGVRHRVIQRPV 437
++P P+ G KV GPI F+NVT + + + P+
Sbjct: 485 RQPTISPTKGEKVASARGPIRFENVTFSYPTRPAV-----------------------PI 521
Query: 438 LRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGYWEEKYRPTSGKIEV-------- 489
R+LNF I G VA+VG SG GK+T+ ++L Y PT G++ +
Sbjct: 522 FRDLNFEIPQGTNVAIVGPSGGGKSTIASILL--------RFYSPTEGRVLIGGKDITHM 573
Query: 490 -PKNAKVSVLIPGEIEPEFGSETILEHV-----YRKIRDLNAAVEVLNRAGLSD-----A 538
K+ + + I + EP S TI E++ K ++ AA N +SD
Sbjct: 574 NAKSLRRKIGIVSQ-EPVLFSGTIAENIAYGKPQAKRSEIVAAARKANCQFISDFPDGLD 632
Query: 539 VLYRAKFSELSTGQKERAKIASLLAERPNVLLIDEFAAHLDTLTAMRVARKVSEIVREAG 598
+ ++LS GQK+R IA L + P++L++DE + LD + V ++ ++R
Sbjct: 633 TQVGPRGAQLSGGQKQRIAIARALIKDPDILILDEATSALDAESETLVNSALTALLR-GN 691
Query: 599 ITAVIITHRPEVVKALDPDKVL 620
T + I HR +K D VL
Sbjct: 692 NTTISIAHRLSTIKRSDTIIVL 713
>pir||T40790 probable permease - fission yeast (Schizosaccharomyces pombe)
>gi|4760347|emb|CAB42370.1| (AL049769) putative permease
[Schizosaccharomyces pombe]
Length = 726
Score = 73.4 bits (177), Expect = 7e-12
Identities = 62/215 (28%), Positives = 100/215 (45%), Gaps = 30/215 (13%)
Query: 437 VLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGYWEEKYRPTSGKIEVPKNAKVS 496
+ NL+F I+PG VA+V SG GK+T+ +L+L Y P+SGKI + +S
Sbjct: 499 IFDNLSFDIHPGTNVAIVAPSGGGKSTISQLLL--------RFYAPSSGKI-LADGVDIS 549
Query: 497 VLIPGEIEPEFG---------SETILEHV-YRKIRDLNAAVE-VLNRAGLSDAVLYRAKF 545
+ FG S TI E++ Y K +E RA S + + K+
Sbjct: 550 TYNVHQWRSHFGLVGQEPVLFSGTIGENIAYGKSNASQEEIEDAAKRANCSFVLSFPEKW 609
Query: 546 S--------ELSTGQKERAKIASLLAERPNVLLIDEFAAHLDTLTAMRVARKVSEIVREA 597
S +LS GQK+R IA L P L++DE + LD + V + + ++
Sbjct: 610 STQVGTRGLQLSGGQKQRIAIARALLRNPAFLILDEATSALDGEAEVMVDKTIQSLMHNR 669
Query: 598 GITAVIITHRPEVVKALDPDKVLFVGYGTVIVRKS 632
+T + I H+ ++ D+++ VG G V+ + S
Sbjct: 670 SMTTITIAHKLATIRR--ADQIIVVGDGKVLEQGS 702
>emb|CAB59828.1| (AJ012388) hypothetical protein [Lactococcus lactis]
Length = 368
Score = 73.4 bits (177), Expect = 7e-12
Identities = 68/250 (27%), Positives = 111/250 (44%), Gaps = 45/250 (18%)
Query: 418 EIQDLLKAFGVRHRVIQRPVLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGYWE 477
E+ +L F + R++ ++N I G++ V+G SGAGK+TL+R I
Sbjct: 6 ELNNLSVQFHQKGRLVT--AVKNATLHIEKGDIYGVIGYSGAGKSTLVRTI--------N 55
Query: 478 EKYRPTSGKIEVPK----NAKVSVLIPGEIEPEF--------------GSETILEHV--- 516
+PT G+I + +++ V G EF +T+ +V
Sbjct: 56 LLQKPTEGQIVINGEKIFDSENPVKFTGAKLREFRQKIGMIFQHFNLLSEKTVFNNVAFA 115
Query: 517 --YRKIRDLNAAVEVLNRAGLSDAVLYRAKF-----------SELSTGQKERAKIASLLA 563
+ +I D N L + +D V K ++LS GQK+R IA LA
Sbjct: 116 LQHSQIEDKNGKKRYLTKKEKNDKVTELLKLVDLADLSDKYPAQLSGGQKQRVAIARALA 175
Query: 564 ERPNVLLIDEFAAHLDTLTAMRVARKVSEIVREAGITAVIITHRPEVVKALDPDKVLFVG 623
P +L+ DE + LD T ++ + + + GIT V+ITH +VVK + +KV +
Sbjct: 176 NDPEILISDEGTSALDPKTTNQILDLLKSLHEKLGITVVLITHEMQVVKEI-ANKVAVMQ 234
Query: 624 YGTVIVRKSL 633
G +I + SL
Sbjct: 235 NGEIIEQNSL 244
>gb|AAF51223.1| (AE003582) CG9892 gene product [Drosophila melanogaster]
Length = 615
Score = 73.4 bits (177), Expect = 7e-12
Identities = 62/209 (29%), Positives = 99/209 (46%), Gaps = 21/209 (10%)
Query: 411 DIKGLPQEIQDLLKAFGVRHRVIQRPVLRNLNFTINPGEVVAVVGASGAGKTTLLRLILG 470
++ G+ +DL+ V + ++ VL+ + T GE+ A++G SGAGK++L+ ++ G
Sbjct: 9 NVYGIDIHFEDLVYQVNVPKKPEKKSVLKGIKGTFKSGELTAIMGPSGAGKSSLMNILTG 68
Query: 471 AIKGYWEEKYRPTSGKIEVPKNAKVS--VLIPGEIEPEFG-SETILEHVYRKIRDLNAAV 527
K SGKIE+ K K+ ++ P F ET+L KI N V
Sbjct: 69 LTKS-------GVSGKIEIGKARKLCGYIMQDDHFFPYFTVEETMLMAATLKIS--NQCV 119
Query: 528 EVLNRAGLSDAVL--------YRAKFSELSTGQKERAKIASLLAERPNVLLIDEFAAHLD 579
+ + L D +L + K S LS GQK+R IA L + P VL +DE LD
Sbjct: 120 SLKEKRTLIDYLLNSLKLTKTRQTKCSNLSGGQKKRLSIALELIDNPAVLFLDEPTTGLD 179
Query: 580 TLTAMRVARKVSEIVREAGITAVIITHRP 608
+ ++ + + + E G T V H+P
Sbjct: 180 SSSSFDTIQLLRGLANE-GRTIVCTIHQP 207
>dbj|BAB05182.1| (AP001512) ABC transporter (ATP-binding protein) [Bacillus
halodurans]
Length = 240
Score = 73.4 bits (177), Expect = 7e-12
Identities = 68/220 (30%), Positives = 102/220 (45%), Gaps = 18/220 (8%)
Query: 419 IQDLLKAFGVRHRVIQRPVLRNLNFTINPGEVVAVVGASGAGKTTLLR---LILGAIKGY 475
++DL K+FG VL+ + I G+VVAV+G SG+GK+T LR L+ G+
Sbjct: 4 VKDLHKSFG------SLEVLKGITTEIQKGDVVAVIGPSGSGKSTFLRCLNLLEVPTSGH 57
Query: 476 -WEEKYRPTSGKIEVPK-NAKVSVLIPG-EIEPEFGSETILEHVYRKIRDLNAAVEVLNR 532
W + T K V K K+ ++ + P L K++ ++ A +
Sbjct: 58 VWIDDEEITHPKTNVGKLRTKIGMVFQHFHLFPHMTVMENLTFAPMKVKGVSKAEAIAKG 117
Query: 533 AGLSDAVLYRAKFSE----LSTGQKERAKIASLLAERPNVLLIDEFAAHLDTLTAMRVAR 588
L V K E LS GQK+R IA LA P V+L DE + LD V
Sbjct: 118 ESLLQKVGLLEKRDEYPSRLSGGQKQRVAIARALAMDPEVMLFDEPTSALDPEMVKEVLA 177
Query: 589 KVSEIVREAGITAVIITHRPEVVKALDPDKVLFVGYGTVI 628
+ ++ E G+T VI+TH K + D+VLF+ G ++
Sbjct: 178 VMKDLA-ETGMTMVIVTHEMGFAKEV-ADRVLFLDQGILL 215
>dbj|BAB07321.1| (AP001519) cell-division ATP-binding protein [Bacillus halodurans]
Length = 223
Score = 73.4 bits (177), Expect = 7e-12
Identities = 67/222 (30%), Positives = 111/222 (49%), Gaps = 31/222 (13%)
Query: 426 FGVRHRVIQRPVLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGYWEEKYRPTSG 485
FG R + + ++ ++ I GE V +VG SGAGK+T +++I Y EE RPT G
Sbjct: 2 FGRLIRTVLKRLMESI-LNIEKGEFVYIVGPSGAGKSTFIKMI------YREE--RPTKG 52
Query: 486 KIEVPKNAKVSVL----IP------GEIEPEFG---SETILEHVYRKIRDLNAAVEVLNR 532
+I + N +S L IP G + +F S+++ E+V + + + E + +
Sbjct: 53 EIVI-NNTNLSSLKERQIPYLRRNIGVVFQDFKLLTSQSVYENVAFALEVIEESPEAIKK 111
Query: 533 AGLSDAVLYRAKF------SELSTGQKERAKIASLLAERPNVLLIDEFAAHLDTLTAMRV 586
+ + R K SELS G+++R IA + +P+VL+ DE +LD TA +
Sbjct: 112 KVMDVLDIVRLKNKARFLPSELSGGEQQRVAIARAIVNQPDVLIADEPTGNLDPDTAWGI 171
Query: 587 ARKVSEIVREAGITAVIITHRPEVVKALDPDKVLFVGYGTVI 628
+ EI R G T V+ TH E+V + +V+ + G V+
Sbjct: 172 MDTLEEINR-LGTTVVMATHNKEIVNTI-KRRVIAIENGRVV 211
>gi|10955056 occP [Agrobacterium tumefaciens] >gi|464298|sp|P35117|OCCP_AGRTU
OCTOPINE PERMEASE ATP-BINDING PROTEIN P
>gi|95106|pir||C41044 octopine transport protein occP -
Agrobacterium tumefaciens plasmid pTiA6 and pTiB6S3
>gi|154771|gb|AAA98381.1| (AF242881) occP [Agrobacterium
tumefaciens] >gi|496543|emb|CAA82985.1| (Z30328) OccP
[Agrobacterium tumefaciens]
Length = 262
Score = 73.0 bits (176), Expect = 1e-11
Identities = 69/233 (29%), Positives = 116/233 (49%), Gaps = 33/233 (14%)
Query: 418 EIQDLLKAFGVRHRVIQRPVLRNLNFTINPGEVVAVVGASGAGKTTLLRLI-------LG 470
+++D+ K FG VL ++ + N GEV++++G+SG+GK+TLLR + G
Sbjct: 10 QLKDIRKNFG------NLEVLHGVSLSANEGEVISILGSSGSGKSTLLRCVNMLEVPNAG 63
Query: 471 AIKGYWEE-KYRPTSGKIEVPKNAKVSVLIPGEIEPEF------GSETILEH-----VYR 518
++ EE +G++ PK+ K + F +TIL++ V+
Sbjct: 64 SVAIMGEEIALEHRAGRLARPKDLKQVNRLRERAAMVFQGFNLWSHQTILQNVMEAPVHV 123
Query: 519 KIRDLNA----AVEVLNRAGLSDAVLYRAKFSELSTGQKERAKIASLLAERPNVLLIDEF 574
+ RD A A +L R G+ A A SELS GQ++RA IA LA RP+V+L DE
Sbjct: 124 QGRDRKACRDEAEALLERVGI--ASKRDAYPSELSGGQQQRAAIARALAMRPDVMLFDEP 181
Query: 575 AAHLDTLTAMRVARKVSEIVREAGITAVIITHRPEVVKALDPDKVLFVGYGTV 627
+ LD V + + ++ E G T +I+TH + + + + +F+ G +
Sbjct: 182 TSALDPELVGEVLKVMRDLAAE-GRTMLIVTHEMDFARDVS-SRTVFLHQGVI 232
>pir||T30293 ABC transport protein homolog - Salmonella typhi
>gi|1698599|gb|AAB37256.1| (U62129) ATP binding cassette
(ABC) transporter homolog [Salmonella typhi]
Length = 1218
Score = 73.0 bits (176), Expect = 1e-11
Identities = 66/228 (28%), Positives = 104/228 (44%), Gaps = 33/228 (14%)
Query: 423 LKAFGVRHRVIQRPVLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGYWEEKYRP 482
L+A R+ +PVL NL+ TI PG VVAVVG SGAGK+TL++L+ G Y P
Sbjct: 969 LEALTFRYPEKTQPVLDNLSLTIPPGTVVAVVGRSGAGKSTLIKLLAGL--------YSP 1020
Query: 483 TSGKIEVPKNAKVSVLIPGEIEPEFG---------SETILEHV-YRKIRDLNAAVEVLNR 532
SG+I V + + + + G S I E++ Y + + VE+ R
Sbjct: 1021 GSGQIRVGERL-IDAASLSDYRRQTGLVTQDVALFSGDIAENIRYSRPDSSDTEVEIAAR 1079
Query: 533 -AGLSDAVLY---------RAKFSELSTGQKERAKIASLLAERPNVLLIDEFAAHLDTLT 582
AGL + V + ++LS GQ++ +A + ++LL+DE A +D
Sbjct: 1080 QAGLFETVQHLPLGFRTPVNNGGTDLSAGQRQLIALARAQLAQAHILLLDEATARIDRSA 1139
Query: 583 AMRVARKVSEIVREAGITAVIITHRPEVVKALDP----DKVLFVGYGT 626
R+ ++ + A+I+ HR + D DK YG+
Sbjct: 1140 EERLITSLTGVTHTEKRIALIVAHRLTTARRCDVIVVIDKGCIAEYGS 1187
>sp|P75831|YBJZ_ECOLI HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PROTEIN YBJZ
>gi|7430353|pir||G64826 probable ABC transporter ybjZ -
Escherichia coli >gi|1787105|gb|AAC73966.1| (AE000189)
putative ATP-binding component of a transport system
[Escherichia coli K12] >gi|4062463|dbj|BAA35598.1|
(D90725) ABC transporter probable ATP-binding subunit
homolog [Escherichia coli]
Length = 648
Score = 73.0 bits (176), Expect = 1e-11
Identities = 67/226 (29%), Positives = 109/226 (47%), Gaps = 24/226 (10%)
Query: 418 EIQDLLKAFGVRHRVIQRPVLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGYWE 477
E++D+ +++ ++ VL+ ++ I GE+VA+VGASG+GK+TL+ ILG +
Sbjct: 6 ELKDIRRSYPAGDEQVE--VLKGISLDIYAGEMVAIVGASGSGKSTLMN-ILGCLDKATS 62
Query: 478 EKYRPTSGKIEVPKNAKVSVLIPGEIEPEFGSETILEH-----------VY----RKIRD 522
YR + ++ L F +L H VY RK R
Sbjct: 63 GTYRVAGQDVATLDADALAQLRREHFGFIFQRYHLLSHLTAEQNVEVPAVYAGLERKQRL 122
Query: 523 LNAAVEVLNRAGLSDAVLYRAKFSELSTGQKERAKIASLLAERPNVLLIDEFAAHLDTLT 582
L A E+L R GL D Y ++LS GQ++R IA L V+L DE LD+ +
Sbjct: 123 LRAQ-ELLQRLGLEDRTEYYP--AQLSGGQQQRVSIARALMNGGQVILADEPTGALDSHS 179
Query: 583 AMRVARKVSEIVREAGITAVIITHRPEVVKALDPDKVLFVGYGTVI 628
V + ++ R+ G T +I+TH P+V A ++V+ + G ++
Sbjct: 180 GEEVMAILHQL-RDRGHTVIIVTHDPQV--AAQAERVIEIRDGEIV 222
>gi|11038656 ATP-binding cassette, sub-family B, member 11; bile salt export
pump [Mus musculus] >gi|6502606|gb|AAF14372.1|AF133903_1
(AF133903) liver bile salt export pump;
sister-of-p-glycoprotein [Mus musculus domesticus]
Length = 1321
Score = 73.0 bits (176), Expect = 1e-11
Identities = 69/262 (26%), Positives = 115/262 (43%), Gaps = 56/262 (21%)
Query: 389 KVEMLEGPIVFKNVTKVFESELDIKGLPQEIQDLLKAFGVRHRVIQRPVLRNLNFTINPG 448
K++ ++G I F NVT + S ++K +L NL+ I PG
Sbjct: 412 KLDRIKGEIEFHNVTFHYPSRPEVK-----------------------ILNNLSMVIKPG 448
Query: 449 EVVAVVGASGAGKTTLLRLILGAIKGYWEEKYRPTSGKIEVPKNAKVSVLIPG------- 501
E A VG+SGAGK+T L+LI + Y P G + + + S+ I
Sbjct: 449 ETTAFVGSSGAGKSTALQLI--------QRFYDPCEGMVTLDGHDIRSLNIRWLRDQIGI 500
Query: 502 -EIEPEFGSETI------------LEHVYRKIRDLNAAVEVLNRAGLSDAVLYRAKFSEL 548
E EP S TI +E + + +D NA ++ D ++ ++
Sbjct: 501 VEQEPVLFSTTIAENIRLGREEATMEDIVQAAKDANAYNFIMALPQQFDTLVGEGG-GQM 559
Query: 549 STGQKERAKIASLLAERPNVLLIDEFAAHLDTLTAMRVARKVSEIVREAGITAVIITHRP 608
S GQK+R IA L +P +LL+D + LD + +V +++I + G T + + HR
Sbjct: 560 SGGQKQRVAIARALIRKPKILLLDMATSALDNESEAKVQGALNKI--QHGHTIISVAHRL 617
Query: 609 EVVKALDPDKVLFVGYGTVIVR 630
V++ D ++ +GT + R
Sbjct: 618 STVRS--ADVIIGFEHGTAVER 637
>pir||E81105 ABC transporter, ATP-binding protein NMB1240 [imported] - Neisseria
meningitidis (group B strain MD58)
>gi|7226480|gb|AAF41621.1| (AE002472) ABC transporter,
ATP-binding protein [Neisseria meningitidis MC58]
Length = 542
Score = 73.0 bits (176), Expect = 1e-11
Identities = 74/276 (26%), Positives = 124/276 (44%), Gaps = 26/276 (9%)
Query: 361 QEAKEYLERYFKEDPYAPKEP--LWKPSYGKVEMLE-GPIVFKNVTKVFESELDIKGLPQ 417
QE +E++ R+ A + L + K EM+E P +N FE++ K Q
Sbjct: 263 QELQEFVARFSANKSKARQATSRLKQADKIKSEMVEVKPSTRQNPYIRFEADEKAKLHRQ 322
Query: 418 --EIQDLLKAFGVRHRVIQRPVLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGY 475
E++ L K F + + +NLNF + G+ +A++G +GAGK+TLL+L+ GA
Sbjct: 323 AVEVEKLAKRF-------ETQLFKNLNFILEAGQRLAIIGPNGAGKSTLLKLLAGAYNPE 375
Query: 476 WEEKYRPTSGKIEVPKNAKVSVLIPGEIEPEFGSETILEHVYRKIRDLNAAVEVLNRA-- 533
+ + P G I+ + A V P + E +F + L R+ +V+
Sbjct: 376 YSDGLLPDEGTIKWAEKASVG-YYPQDHENDFDVDMDLSEWMRQWGQEGDDEQVIRGTLG 434
Query: 534 ----GLSDAVLYRAKFSELSTGQKERAKIASLLAERPNVLLIDEFAAHLDTLTAMRVARK 589
G +D V K LS G+K R LL +PNVL++DE H+D M
Sbjct: 435 RLLFGSNDVV---KKVKVLSGGEKGRMLYGKLLLLKPNVLVMDEPTNHMD----MESIES 487
Query: 590 VSEIVREAGITAVIITHRPEVVKALDPDKVLFVGYG 625
++ + + T + ++H + V +L + G G
Sbjct: 488 LNMALEKYNGTLIFVSHDRQFVSSLATQIIELDGKG 523
>pir||B81910 probable ABC-transporter ATP-binding protein NMA1409 [imported] -
Neisseria meningitidis (group A strain Z2491)
>gi|7380068|emb|CAB84649.1| (AL162755) putative
ABC-transporter ATP-binding protein [Neisseria
meningitidis Z2491]
Length = 542
Score = 73.0 bits (176), Expect = 1e-11
Identities = 74/276 (26%), Positives = 124/276 (44%), Gaps = 26/276 (9%)
Query: 361 QEAKEYLERYFKEDPYAPKEP--LWKPSYGKVEMLE-GPIVFKNVTKVFESELDIKGLPQ 417
QE +E++ R+ A + L + K EM+E P +N FE++ K Q
Sbjct: 263 QELQEFVARFSANKSKARQATSRLKQADKIKSEMVEVKPSTRQNPYIRFEADEKAKLHRQ 322
Query: 418 --EIQDLLKAFGVRHRVIQRPVLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGY 475
E++ L K F + + +NLNF + G+ +A++G +GAGK+TLL+L+ GA
Sbjct: 323 AVEVEKLAKRF-------ETQLFKNLNFILEAGQRLAIIGPNGAGKSTLLKLLAGAYNPE 375
Query: 476 WEEKYRPTSGKIEVPKNAKVSVLIPGEIEPEFGSETILEHVYRKIRDLNAAVEVLNRA-- 533
+ + P G I+ + A V P + E +F + L R+ +V+
Sbjct: 376 YSDGLLPDEGSIKWAEKASVG-YYPQDHENDFDVDMDLSEWMRQWGQDGDDEQVIRGTLG 434
Query: 534 ----GLSDAVLYRAKFSELSTGQKERAKIASLLAERPNVLLIDEFAAHLDTLTAMRVARK 589
G +D V K LS G+K R LL +PNVL++DE H+D M
Sbjct: 435 RLLFGSNDVV---KKVKVLSGGEKGRMLYGKLLLLKPNVLVMDEPTNHMD----MESIES 487
Query: 590 VSEIVREAGITAVIITHRPEVVKALDPDKVLFVGYG 625
++ + + T + ++H + V +L + G G
Sbjct: 488 LNMALEKYNGTLIFVSHDRQFVSSLATQIIELDGKG 523
>gb|AAF69534.1|AC008007_9 (AC008007) F12M16.17 [Arabidopsis thaliana]
Length = 590
Score = 73.0 bits (176), Expect = 1e-11
Identities = 59/217 (27%), Positives = 106/217 (48%), Gaps = 22/217 (10%)
Query: 434 QRPVLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIK-----GYWEEKYRPTSGKIE 488
++ +L++++ E+ A+ G SGAGKTTLL ++ G + G RP G
Sbjct: 47 EKVILKDVSCDARSAEITAIAGPSGAGKTTLLEILAGKVSHGKVSGQVLVNGRPMDG--- 103
Query: 489 VPKNAKVSVLIPGEIEPEFGSETILE--------HVYRKIRDLNAAVE-VLNRAGL---S 536
P+ +VS +P E + F T+ E + K +D A V+ ++ GL +
Sbjct: 104 -PEYRRVSGFVPQE-DALFPFLTVQETLTYSALLRLKTKRKDAAAKVKRLIQELGLEHVA 161
Query: 537 DAVLYRAKFSELSTGQKERAKIASLLAERPNVLLIDEFAAHLDTLTAMRVARKVSEIVRE 596
D+ + + S +S G++ R I L PNV+LIDE + LD+ +A++V + ++ +
Sbjct: 162 DSRIGQGSRSGISGGERRRVSIGVELVHDPNVILIDEPTSGLDSASALQVVTLLKDMTIK 221
Query: 597 AGITAVIITHRPEVVKALDPDKVLFVGYGTVIVRKSL 633
G T V+ H+P D+++ + G V+ S+
Sbjct: 222 QGKTIVLTIHQPGFRILEQIDRIVLLSNGMVVQNGSV 258
>prf||1901178A cystic fibrosis transmembrane conductance regulator [Rattus
norvegicus]
Length = 1478
Score = 72.6 bits (175), Expect = 1e-11
Identities = 60/209 (28%), Positives = 107/209 (50%), Gaps = 14/209 (6%)
Query: 432 VIQRPVLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGYWEEKYRPTSGKIEVPK 491
++ PVL+N+N I GE++A+ G++GAGKT+LL LILG ++ E SG++
Sbjct: 435 LVGNPVLKNINLNIKKGEMLAITGSTGAGKTSLLMLILGELEA--SEGIIKHSGRVSF-- 490
Query: 492 NAKVSVLIPGEIEPE--FGSETILEHVYRKIRDLNAAVEVLNRAGLSDAVLYRAKFSELS 549
++ +S ++PG I+ FG + E+ Y+ + E + + D + LS
Sbjct: 491 SSLISWIMPGTIKENIIFG-VSYDEYRYKSVVKACQLQEDMTKFAEQDNTVLGEGGVTLS 549
Query: 550 TGQKERAKIASLLAERPNVLLIDEFAAHLDTLTAMRVARK-VSEIVREAGITAVIITHRP 608
GQ+ R +A + + ++ L+D +LD LT ++ V +++ A T +++T +
Sbjct: 550 GGQRARISLARAVYKDADLYLLDSPFGYLDVLTEEQIFESCVCKLM--ASKTRILVTSKM 607
Query: 609 EVVKALDPDKVLFVG----YGTVIVRKSL 633
E +K D +L G YGT +SL
Sbjct: 608 EQLKKADKILILHEGSSYFYGTFSELQSL 636
>pir||I76773 ATP binding component of ABC-transporter - Escherichia coli
>gi|598468|dbj|BAA07748.1| (D43637) putative ATP binding
component of ABC-transporter [Escherichia coli]
Length = 431
Score = 72.6 bits (175), Expect = 1e-11
Identities = 59/218 (27%), Positives = 107/218 (49%), Gaps = 27/218 (12%)
Query: 419 IQDLLKAFGVRHRVIQRPVLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGYWEE 478
I+ LL RH ++ VL+++NF+I PGE V +VG +GAGK+TLL+L+ G
Sbjct: 23 IEKLLPGDKPRHS--KKWVLKDINFSIEPGEAVGIVGVNGAGKSTLLKLLTGTT------ 74
Query: 479 KYRPTSGKIEVPKNAKVSVLIPGEIEPEFGSETILEHVYRKIRDLNAAVEVLNR------ 532
+PT G IE+ + + P+F T ++VY + E + R
Sbjct: 75 --QPTKGSIEIQGRVAALLELGMGFHPDF---TGRQNVYMSGLMMGLGREEIERLMPEIE 129
Query: 533 --AGLSDAVLYRAKFSELSTGQKERAKIASLLAERPNVLLIDEFAAHLDTLTAMRVARKV 590
A + D + + S+G + R A A RP++L++DE + D+ + ++
Sbjct: 130 AFADIGDYIEEPVRI--YSSGMQMRLAFAVATASRPDILIVDEALSVGDSRFQAKCYARI 187
Query: 591 SEIVREAGITAVIITHRP-EVVKALDPDKVLFVGYGTV 627
++ +E G T ++++H ++VK D+ +F+ G +
Sbjct: 188 ADF-KEQGTTLLLVSHSAGDIVKHC--DRAIFLKNGDI 222
>dbj|BAA28332.1| (AB010293) ATP binding component of ABC-transporter [Escherichia
coli]
Length = 431
Score = 72.6 bits (175), Expect = 1e-11
Identities = 59/218 (27%), Positives = 107/218 (49%), Gaps = 27/218 (12%)
Query: 419 IQDLLKAFGVRHRVIQRPVLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGYWEE 478
I+ LL RH ++ VL+++NF+I PGE V +VG +GAGK+TLL+L+ G
Sbjct: 23 IEKLLPGDKPRHS--KKWVLKDINFSIEPGEAVGIVGVNGAGKSTLLKLLTGTT------ 74
Query: 479 KYRPTSGKIEVPKNAKVSVLIPGEIEPEFGSETILEHVYRKIRDLNAAVEVLNR------ 532
+PT G IE+ + + P+F T ++VY + E + R
Sbjct: 75 --QPTKGSIEIQGRVAALLELGMGFHPDF---TGRQNVYMSGLMMGLGREEIERLMPEIE 129
Query: 533 --AGLSDAVLYRAKFSELSTGQKERAKIASLLAERPNVLLIDEFAAHLDTLTAMRVARKV 590
A + D + + S+G + R A A RP++L++DE + D+ + ++
Sbjct: 130 AFADIGDYIEEPVRI--YSSGMQMRLAFAVATASRPDILIVDEALSVGDSRFQAKCYARI 187
Query: 591 SEIVREAGITAVIITHRP-EVVKALDPDKVLFVGYGTV 627
++ +E G T ++++H ++VK D+ +F+ G +
Sbjct: 188 ADF-KEQGTTLLLVSHSAGDIVKHC--DRAIFLKNGDI 222
>emb|CAC05880.1| (AL391754) putative ABC transporter ATP-binding protein
[Streptomyces coelicolor]
Length = 229
Score = 72.6 bits (175), Expect = 1e-11
Identities = 64/213 (30%), Positives = 95/213 (44%), Gaps = 17/213 (7%)
Query: 422 LLKAFGVRHRVIQRPVLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAI---KGYWEE 478
LL A +R L F+I+PGEVVAV+G SG+GK+TLL + G + G
Sbjct: 8 LLSADQLRKAYGPTLALDGAEFSIHPGEVVAVMGPSGSGKSTLLHCLAGIVPPDSGTITY 67
Query: 479 KYRPTSGKIEVPKNAKVS-----VLIPGEIEPEFGSETILEHVYRKIRDLNAAVEVLNRA 533
R S + ++A V G++ PE T +E+V +R + + RA
Sbjct: 68 NGRELSAMSDAQRSALRRSDFGFVFQFGQLVPEL---TCVENVALPLRLNGTSRKEAERA 124
Query: 534 GLSDAV------LYRAKFSELSTGQKERAKIASLLAERPNVLLIDEFAAHLDTLTAMRVA 587
LS L + + E+S GQ +R +A L P VL DE LD+L RV
Sbjct: 125 ALSWMERLEVDDLRKKRPGEVSGGQGQRVAVARSLVTNPRVLFADEPTGALDSLNGERVM 184
Query: 588 RKVSEIVREAGITAVIITHRPEVVKALDPDKVL 620
+++ R V++TH V D + V+
Sbjct: 185 ELLTDAARSTNAAVVLVTHEARVAAYSDREIVV 217
>gb|AAG26946.1|AC069471_7 (AC069471) P-glycoprotein, putative [Arabidopsis thaliana]
Length = 1247
Score = 72.6 bits (175), Expect = 1e-11
Identities = 66/261 (25%), Positives = 122/261 (46%), Gaps = 56/261 (21%)
Query: 384 KPSYGKVEMLEGPIVFKNVTKVFESELDIKGLPQEIQDLLKAFGVRHRVIQRPVLRNLNF 443
+P+ V ++G I F+NV+ + + +I + +NLN
Sbjct: 993 QPNSRLVTHIKGDIEFRNVSFAYPTRPEIA-----------------------IFKNLNL 1029
Query: 444 TINPGEVVAVVGASGAGKTTLLRLILGAIKGYWEEKYRPTSGKIEVPKNAKVSVLIPG-- 501
++ G+ +AVVG SG+GK+T++ LI+ Y P++G + + + SV +
Sbjct: 1030 RVSAGKSLAVVGPSGSGKSTVIGLIM--------RFYDPSNGNLCIDGHDIKSVNLRSLR 1081
Query: 502 ------EIEPEFGSETILEHVYRKIRDLNAA-VEVLNRAGLSDAVLYRAKFSE------- 547
+ EP S +I E++ K + NA+ E++ A ++A + ++ E
Sbjct: 1082 KKLALVQQEPALFSTSIHENI--KYGNENASEAEIIEAAKAANAHEFISRMEEGYMTHVG 1139
Query: 548 -----LSTGQKERAKIASLLAERPNVLLIDEFAAHLDTLTAMRVARKVSEIVREAGITAV 602
LS GQK+R IA + + P+VLL+DE + LDT +V + ++++ G T +
Sbjct: 1140 DKGVQLSGGQKQRVAIARAVLKDPSVLLLDEATSALDTSAEKQVQEALDKLMK--GRTTI 1197
Query: 603 IITHRPEVVKALDPDKVLFVG 623
++ HR ++ D VL G
Sbjct: 1198 LVAHRLSTIRKADTIVVLHKG 1218
>pir||S30327 multidrug resistance protein 1 - Entamoeba histolytica
>gi|158971|gb|AAA29112.1| (M88599) P-glycoprotein-1
[Entamoeba histolytica]
Length = 1302
Score = 72.2 bits (174), Expect = 2e-11
Identities = 59/215 (27%), Positives = 108/215 (49%), Gaps = 36/215 (16%)
Query: 437 VLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGYWEEKYRPTSGKIEVP----KN 492
VL+ ++F G+ +A+VGASG GK+T ++LI E Y PTSG++ + K+
Sbjct: 1074 VLKGISFKAEQGKTIALVGASGCGKSTTIQLI--------ERFYDPTSGEVLLDGHNIKD 1125
Query: 493 AKVSVL-----IPGEIEPEFGSETILEHVYRKIRD--------LNAAVEVLNRAGLSDAV 539
+ L + G+ EP +E++++++ R + + + AA ++ N A+
Sbjct: 1126 LNIHFLRNQIGLVGQ-EPVLFAESVIDNIKRGVPEGVEVSNEQIYAAAKMANAHDFISAM 1184
Query: 540 ------LYRAKFSELSTGQKERAKIASLLAERPNVLLIDEFAAHLDTLTAMRVARKVSEI 593
+ + S+LS GQK+R IA L P VLL+DE + LD+ + V + +
Sbjct: 1185 PEGYNTMVGDRGSQLSGGQKQRIAIARALIRNPKVLLLDEATSALDSESEKIVQDALDKA 1244
Query: 594 VREAGITAVIITHRPEVVKALDPDKVLFVGYGTVI 628
+ G T ++I HR ++ + DK+ + G ++
Sbjct: 1245 SK--GRTTIVIAHRLSTIQ--NADKIYVIMRGKIV 1275
>gb|AAA96713.1| (L42939) major histocompatibility complex class I [Mesocricetus
auratus]
Length = 703
Score = 72.2 bits (174), Expect = 2e-11
Identities = 65/236 (27%), Positives = 114/236 (47%), Gaps = 38/236 (16%)
Query: 418 EIQDLLKAFGVRHRVIQRPVLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGYWE 477
E QD+ ++ R +PVL+ L FT++PG+V A+VG +G+GK+T+ + +
Sbjct: 469 EFQDVTFSYPSRPX---KPVLKGLTFTLHPGKVTALVGPNGSGKSTVAAPL--------Q 517
Query: 478 EKYRPTSGKIEVPKNAKV---------SVLIPGEIEPEFGSETILEHVYRKIRDL-NAAV 527
Y+PT G++ + V V++ G+ EP S ++ +++ ++D +A V
Sbjct: 518 NLYQPTGGQLLLDGQPLVQYDHHYLHRQVVLVGQ-EPVLFSGSVKDNIAYGLKDCEDAQV 576
Query: 528 EVLNRAGLSDAVL----------YRAKFSELSTGQKERAKIASLLAERPNVLLIDEFAAH 577
RA +D + K S+L+ GQK+R IA L P VL++DE +
Sbjct: 577 MAAVRAACADDFIGEMPDGIHTEIGEKGSQLAVGQKQRLAIARALVRNPRVLILDEATSA 636
Query: 578 LDTLTAMRVARKVSEIVREAGITAVIITHRPEVVKALDPDKVLFVGYGTVIVRKSL 633
LD+ + S+ R T ++I HR V+ + D+VL + G ++ L
Sbjct: 637 LDSQCEQALQAWRSKGDR----TVLVIAHRLHTVQ--NVDQVLVLKQGQLVEHSQL 686
>gi|11498626 ABC transporter, ATP-binding protein [Archaeoglobus fulgidus]
>gi|7445710|pir||E69377 ABC transporter, ATP-binding
protein homolog - Archaeoglobus fulgidus
>gi|2649574|gb|AAB90222.1| (AE001033) ABC transporter,
ATP-binding protein [Archaeoglobus fulgidus]
Length = 275
Score = 72.2 bits (174), Expect = 2e-11
Identities = 61/224 (27%), Positives = 109/224 (48%), Gaps = 29/224 (12%)
Query: 418 EIQDLLKAFGVRHRVIQRPVLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGYWE 477
E+++L K +G V + ++F++ GEV+ ++G +GAGK+T L+++ G I
Sbjct: 3 EVRNLFKRYGSFEAV------KGISFSVRRGEVLGLIGENGAGKSTTLKILAGLI----- 51
Query: 478 EKYRPTSGKI-----EVPKNAKVSVLIPGEIEPEFGSETILEH--VYRKIRDLNAAVE-V 529
RP G++ + + K + EI+ + + T+ E+ ++ I D+ A ++ +
Sbjct: 52 ---RPDGGEVRYFGKDFDEEMKRIIGYLPEIDALYDNMTVSEYLNLFADIYDVRADIDGL 108
Query: 530 LNRAGLSDAVLYRAKFSELSTGQKERAKIASLLAERPNVLLIDEFAAHLDTLTAMRVARK 589
L R L D + S+LS G + + IA L P VL+ DE LD T++ +A
Sbjct: 109 LERLNLPDKYI-----SDLSKGMRRKVSIARTLLHDPEVLVYDEPTGGLDPTTSLSIAEL 163
Query: 590 VSEIVREAGITAVIITHRPEVVKALDPDKVLFVGYGTVIVRKSL 633
+ E+ E G V H V+ + DKV+ + G + SL
Sbjct: 164 LRELA-ERGKIIVFSAHNMYYVERI-ADKVVVMKGGKALYFGSL 205
>gi|11498589 ABC transporter, ATP-binding protein [Archaeoglobus fulgidus]
>gi|7445781|pir||H69372 ABC transporter, ATP-binding
protein homolog - Archaeoglobus fulgidus
>gi|2649613|gb|AAB90258.1| (AE001036) ABC transporter,
ATP-binding protein [Archaeoglobus fulgidus]
Length = 217
Score = 72.2 bits (174), Expect = 2e-11
Identities = 63/211 (29%), Positives = 103/211 (47%), Gaps = 27/211 (12%)
Query: 418 EIQDLLKAFGVRHRVIQRPVLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGYWE 477
E+++L K FG ++ VL+NLNF ++ G VAV+G +GAGK+TL++++ G +
Sbjct: 3 EVRNLSKRFG------RKLVLKNLNFEVDAGR-VAVLGQNGAGKSTLVKMVAGIL----- 50
Query: 478 EKYRPTSGKIEV-------PKNAKVSVLIPGEIEPEFGSETILEHVYRKIRDLNAAVEVL 530
RPT G+++V + + + I +G T+ E++ N+ ++
Sbjct: 51 ---RPTEGEVKVFGKDPSASPDVRERIGIATHNPMLYGELTVRENLEFYAGIYNSKPKLE 107
Query: 531 NRAGLSDAVLY-RAKFSELSTGQKERAKIASLLAERPNVLLIDEFAAHLDTLTAMRVARK 589
A D + Y K SELS G +R +A L P++L++DE + LD V +K
Sbjct: 108 ELARKFDFLEYLDTKVSELSRGYLQRVSMAKALINDPDLLILDEVTSGLDA----TVRKK 163
Query: 590 VSEIVREAGITAVIITHRPEVVKALDPDKVL 620
V EIV T + TH K + VL
Sbjct: 164 VLEIVGTFQGTLLFTTHNLNEAKVCEAFIVL 194
>pir||T30882 multidrug resistance protein 1 - Aspergillus flavus
>gi|2673947|gb|AAB88655.1| (U62931) multidrug resistance
protein 1 [Aspergillus flavus] >gi|2673949|gb|AAB88656.1|
(U62932) multidrug resistance protein 1 [Aspergillus
flavus]
Length = 1307
Score = 72.2 bits (174), Expect = 2e-11
Identities = 64/227 (28%), Positives = 102/227 (44%), Gaps = 39/227 (17%)
Query: 433 IQRPVLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGYWEEKYRPTSGKIEVPKN 492
+++P+LR+LN TI PG+ VA+VGASG+GK+T + L+ E Y P G + V
Sbjct: 1073 LEQPILRHLNLTIKPGQFVALVGASGSGKSTTIALL--------ERFYDPLKGGVYVDGK 1124
Query: 493 AKVSVLIPG--------EIEPEFGSETILEHVYRKIRDLNAAVEVLNRAGLSDAVLY--- 541
+++ + EP TI E++ + + L +A DA +Y
Sbjct: 1125 NIITLEMSSYRSHLALISQEPTLFQGTIRENILLGSNTPHVTDDFLVKA-CKDANIYDFI 1183
Query: 542 -----------RAKFSELSTGQKERAKIASLLAERPNVLLIDEFAAHLDTLTAMRVARKV 590
K LS GQK+R IA L P +LL+DE + LD+ + V +
Sbjct: 1184 LSLPQGFNTIVGNKGGMLSGGQKQRIAIARALIRNPKILLLDEATSALDSESEKVVQAAL 1243
Query: 591 SEIVREAGITAVIITH------RPEVVKALDPDKVLFVGYGTVIVRK 631
R G T + + H R +++ LD +V+ G ++RK
Sbjct: 1244 DAAAR--GRTTIAVAHRLSTIQRADLIYVLDQGEVVESGTHRELLRK 1288
>pir||T35147 glutamate uptake system ATP-binding protein - Streptomyces
coelicolor >gi|2687342|emb|CAA15883.1| (AL020958)
glutamate uptake system ATP-binding protein
[Streptomyces coelicolor A3(2)]
Length = 258
Score = 72.2 bits (174), Expect = 2e-11
Identities = 70/227 (30%), Positives = 115/227 (49%), Gaps = 32/227 (14%)
Query: 419 IQDLLKAFGVRHRVIQRPVLRNLNFTINPGEVVAVVGASGAGKTTLLRLIL-------GA 471
++ + K FG H VL++++ TI GEVV V+G SG+GK+TL R I G+
Sbjct: 20 LKSVNKHFGALH------VLQDIDLTIQRGEVVVVIGPSGSGKSTLCRTINRLETVDDGS 73
Query: 472 IKGYWEEKYRPTSGKIEVPKNAKVSVLIPGEIEPEFGSETILEHV---YRKIRDLNA--- 525
I + K P GK A V ++ + F +T+LE+V K+R ++A
Sbjct: 74 IT--IDGKPLPAEGKELARLRADVGMVF--QSFNLFAHKTVLENVTLGQVKVRKVDAKKA 129
Query: 526 ---AVEVLNRAGL-SDAVLYRAKFSELSTGQKERAKIASLLAERPNVLLIDEFAAHLDTL 581
A +L+R G+ + A Y A +LS GQ++R IA LA P V+L DE + LD
Sbjct: 130 EEKARALLDRVGVGAQADKYPA---QLSGGQQQRVAIARALAMDPKVMLFDEPTSALDPE 186
Query: 582 TAMRVARKVSEIVREAGITAVIITHRPEVVKALDPDKVLFVGYGTVI 628
V + ++ E G+T +++TH ++ ++V+F+ G ++
Sbjct: 187 MINEVLEVMKQLA-EDGMTMIVVTHEMGFARSA-ANRVVFMADGRIV 231
>pir||G72406 hypothetical protein TM0191 - Thermotoga maritima (strain MSB8)
>gi|4980687|gb|AAD35283.1|AE001704_4 (AE001704)
iron(III) ABC transporter, ATP-binding protein, putative
[Thermotoga maritima]
Length = 258
Score = 72.2 bits (174), Expect = 2e-11
Identities = 56/203 (27%), Positives = 99/203 (48%), Gaps = 14/203 (6%)
Query: 435 RPVLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGYWEEKYRPTSGKIEVPKNAK 494
+ +L N+ F+ GE++A++G +GAGK+TLL+ I G +K E + + A+
Sbjct: 14 KKILDNVTFSAQKGELIAILGPNGAGKSTLLKCIAGILKCQGVEIFSKPLEQYTRRDLAR 73
Query: 495 VSVLIPGEIEPEFGSETILEHVYRK--------IRDLNAAVEVLNRAGLSDAVLYRAKFS 546
+ +P I+P + L + RK D+ V+ R L V RAK
Sbjct: 74 IVGYVPQRIDPGMLNVYNLILLGRKPYVSVSPSKEDIEIVNRVVERLNLQHLVFQRAK-- 131
Query: 547 ELSTGQKERAKIASLLAERPNVLLIDEFAAHLDTLTAMRVARKVSEIVREAGITAVIITH 606
LS G+ ++ IA L + P +LL+DE +LD + + V + V+ + A+++ H
Sbjct: 132 NLSGGELQKVSIARALVQEPEILLLDEPTNNLDPKNQIEIMEIVQDFVKSRKM-ALVVMH 190
Query: 607 RPEVVKALD-PDKVLFVGYGTVI 628
E+ AL D+ +F+ G ++
Sbjct: 191 --EINLALRFADRFIFMKDGKIV 211
>gb|AAF47525.1| (AE003472) CG7955 gene product [alt 3] [Drosophila melanogaster]
>gi|7292114|gb|AAF47526.1| (AE003472) CG7955 gene
product [alt 2] [Drosophila melanogaster]
Length = 606
Score = 72.2 bits (174), Expect = 2e-11
Identities = 60/215 (27%), Positives = 106/215 (48%), Gaps = 37/215 (17%)
Query: 435 RPVLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGYWEEKYRPTSGK-------- 486
+P+ R+L+FTI G+ VA+VG SG+GK++++RL+ + P SGK
Sbjct: 361 KPIFRDLSFTIPAGKNVAIVGGSGSGKSSMVRLLF--------RFFEPNSGKVLIGGQDI 412
Query: 487 --IEVPKNAKVSVLIPGEIEPEFGSETILEH--VYRKIRDLNAAVEVLNR-AGLSDAVL- 540
+++ KV ++P + +EH Y + +A V+ R A L D+++
Sbjct: 413 SAVDLESLRKVIAVVP---QDSVLFHNTIEHNIHYGNLSKSHAEVQNAARMADLHDSIMS 469
Query: 541 ----YRAKFSE----LSTGQKERAKIASLLAERPNVLLIDEFAAHLDTLTAMRVARKVSE 592
Y + E LS G+K+R IA + + +L+ DE + LD++T + + ++
Sbjct: 470 WPGQYSTQVGERGLKLSGGEKQRVAIARAILKNTPILIFDEATSSLDSITEHNILQALTR 529
Query: 593 IVREAGITAVIITHRPEVVKALDPDKVLFVGYGTV 627
+G T++ I HR VK D D++L + G V
Sbjct: 530 AT--SGRTSICIAHRLSTVK--DADEILVLENGRV 560
>dbj|BAB04000.1| (AP001508) ABC transporter (ATP-binding protein) [Bacillus
halodurans]
Length = 213
Score = 72.2 bits (174), Expect = 2e-11
Identities = 61/213 (28%), Positives = 104/213 (48%), Gaps = 26/213 (12%)
Query: 418 EIQDLLKAFGVRHRVIQRPVLRNLNFTINPGEVVAVVGASGAGKTTLLRLI-------LG 470
E+ D+ K+F VLR+ N TI+ GE++A+ G SG+GKTT+L +I G
Sbjct: 7 ELTDISKSFH------SETVLRDFNLTIDRGEMIAITGPSGSGKTTILNIIGLLEKEDRG 60
Query: 471 AIKGYWEEKYRPTSGKIEVPKNAKVSVLIPGEIEPEFGSETILEHVYRKIRDLNAA---- 526
++ + + K S + + +K++ L + ET+ +++ + +N +
Sbjct: 61 TVRLFGKNKPAYHSKQALQFRKSKIAYLFQNFALMD--DETVSKNLDVPLELINGSRTVK 118
Query: 527 ----VEVLNRAGLSDAVLYRAKFSELSTGQKERAKIASLLAERPNVLLIDEFAAHLDTLT 582
EVL + GL + + K LS G+++R IA LL ++LL DE LD
Sbjct: 119 QQKKKEVLEKVGLFNKL--NKKVHSLSGGEQQRVAIARLLLRPCDLLLADEPTGSLDMAN 176
Query: 583 AMRVARKVSEIVREAGITAVIITHRPEVVKALD 615
+ + ++ +E G+T VI+TH PEV D
Sbjct: 177 RNVILDLLCQLNKE-GMTIVIVTHDPEVADRCD 208
>pir||D69858 ABC transporter (ATP-binding protein) homolog yknY - Bacillus
subtilis >gi|2633807|emb|CAB13309.1| (Z99111) similar to
ABC transporter (ATP-binding protein) [Bacillus
subtilis] >gi|3282120|gb|AAC24910.1| (AF012285) YknY
[Bacillus subtilis]
Length = 230
Score = 71.8 bits (173), Expect = 2e-11
Identities = 59/218 (27%), Positives = 106/218 (48%), Gaps = 36/218 (16%)
Query: 437 VLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGYWEEKYRPTSGKIEVP------ 490
VL +++ I+ GE V+++G SG+GK+T++ +I G + RPTSG ++
Sbjct: 20 VLHSIDLDIHQGEYVSIMGPSGSGKSTIMNII-GCLD-------RPTSGTYQLDGEDISS 71
Query: 491 ---------KNAKVSVLIPG-EIEPEFGSETILE------HVYRKIRDLNAAVEVLNRAG 534
+N + + ++ P ++ +E + +K R A L + G
Sbjct: 72 YKDKELAAVRNRSIGFVFQQFQLLPRLNAKKNVELPMIYSGIGKKERQ-ERAERALEKVG 130
Query: 535 LSDAVLYRAKFSELSTGQKERAKIASLLAERPNVLLIDEFAAHLDTLTAMRVARKVSEIV 594
L+D +L+ +ELS GQK+R IA + P ++L DE LDT T+ + + + +
Sbjct: 131 LADRMLHMP--NELSGGQKQRVAIARAIVNEPKLILADEPTGALDTKTSEAIMDQFTALN 188
Query: 595 REAGITAVIITHRPEVVKALDPDKVLFVGYGTVIVRKS 632
E G T V++TH PEV ++++ V G ++ S
Sbjct: 189 AE-GTTIVLVTHEPEVADC--TNRIVMVRDGNIVPASS 223
>pir||S45043 expZ protein - Bacillus subtilis (fragment)
>gi|494958|emb|CAA55930.1| (X79387) ExpZ [Bacillus
subtilis]
Length = 425
Score = 71.8 bits (173), Expect = 2e-11
Identities = 55/185 (29%), Positives = 88/185 (46%), Gaps = 36/185 (19%)
Query: 418 EIQDLLKAFGVRHRVIQRPVLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGYWE 477
E+Q++ KAFG +R + +N NFTI GE VA++G +G+GKTTLL +ILG
Sbjct: 171 EVQNVTKAFG------ERTLFKNANFTIQHGEKVAIIGPNGSGKTTLLNIILG------- 217
Query: 478 EKYRPTSGKIEVPKNAKVSVL------IPGEIEPE--FGSETILE--HVYRKIRDLNAAV 527
G + V +A + L +P E PE F +ET HV +R L
Sbjct: 218 --QETAEGSVWVSPSANIGYLTQEVFDLPLEQTPEELFENETFKARGHVQNLMRHLGFT- 274
Query: 528 EVLNRAGLSDAVLYRAKFSELSTGQKERAKIASLLAERPNVLLIDEFAAHLDTLTAMRVA 587
A + +S G++ + K+ + + E +VL++DE HLD + ++
Sbjct: 275 ----------AAQWTEPIKHMSMGERVKIKLMAYILEEKDVLILDEPTNHLDLPSREQLE 324
Query: 588 RKVSE 592
+S+
Sbjct: 325 ETLSQ 329
>pir||T28812 hypothetical protein C54D1.1 - Caenorhabditis elegans
>gi|1166606|gb|AAC48149.1| (U46673) Similar to
multidrug-resistance protein; coded for by C. elegans
cDNA yk13b2.3; coded for by C. elegans cDNA yk13b2.5;
coded for by C. elegans cDNA yk23f10.3; coded for by C.
elegans cDNA yk23f10.5 [Caenorhabditis elegans]
Length = 1283
Score = 71.8 bits (173), Expect = 2e-11
Identities = 67/269 (24%), Positives = 120/269 (43%), Gaps = 42/269 (15%)
Query: 391 EMLEGPIVFKNVTKVFES------ELDIKGLPQEIQDLLKAFGVRHRVIQRP---VLRNL 441
+ + I +NV +V L +GL +++ L V R RP VL NL
Sbjct: 1002 DFTKAQIAAENVMRVIREPPVDMDNLSEEGLRPKLEGNLCLKDVSFRYPSRPIVPVLTNL 1061
Query: 442 NFTINPGEVVAVVGASGAGKTTLLRLILGAIKGYWEEKYRPTSGKIEVPKNAKVSV---- 497
N + GE +A+VG SG+GK++++ L ++ Y T G + + K S+
Sbjct: 1062 NLKVRGGESIALVGPSGSGKSSVISL--------FQRMYNATDGVVIIDKYNIKSINPAY 1113
Query: 498 ----LIPGEIEPEFGSETILEHVYRKIRDLNAAVE-VLNRAGLSDAVLYRAKF------- 545
++ EP+ S TI E++ + + A ++ V+ A ++D +
Sbjct: 1114 LRRCIVQVGQEPDLFSFTIKENIAFGMMESEATIDKVIEAAKIADIHNFITSLPQGYDTE 1173
Query: 546 -----SELSTGQKERAKIASLLAERPNVLLIDEFAAHLDTLTAMRVARKVSEIVR--EAG 598
++LS GQK+R IA + +P VLL+DE + LD+ + V + R +
Sbjct: 1174 VGEFGAQLSGGQKQRIAIARAIIRKPTVLLLDEATSALDSASEREVQNAFERVKRSTKTQ 1233
Query: 599 ITAVIITHRPEVVKALDPDKVLFVGYGTV 627
T + I HR ++ + DK+ + +G +
Sbjct: 1234 CTCIQIAHRLSTIR--NVDKIYVIVHGEI 1260
Score = 69.9 bits (168), Expect = 8e-11
Identities = 58/214 (27%), Positives = 100/214 (46%), Gaps = 37/214 (17%)
Query: 437 VLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGYWEEKYRPTSGKIEVPKNAKVS 496
VLR ++F + GE +A+VG+SG+GK+TL L+L Y PT G I + +
Sbjct: 367 VLRGISFKVEAGEKIAIVGSSGSGKSTLTALLL--------RFYDPTKGAI-LLDGENIK 417
Query: 497 VLIPGEI---------EPEFGSETILEHVYRKIRDLNAAVEVLNRA-----------GLS 536
+ P ++ EP TI +++ + L+A + +N A L
Sbjct: 418 TMCPDDLRGQCSLVSQEPVLFDGTISDNI--RYGRLDATQQEINDAARKVGAWKFINSLP 475
Query: 537 DAVLYRA--KFSELSTGQKERAKIASLLAERPNVLLIDEFAAHLDTLTAMRVARKVSEIV 594
D + R + +LS GQK+R IA + +P VL+ DE + LD + V + +
Sbjct: 476 DGMQTRVGERGHQLSGGQKQRVAIARAVIRKPIVLIFDEATSALDNIHEEEVNAAID--L 533
Query: 595 REAGITAVIITHRPEVVKALDPDKVLFVGYGTVI 628
G+T + I HR +K + D+++ + G ++
Sbjct: 534 ASEGLTTITIAHRLSTIK--NSDRIIVLHEGKIV 565
>sp|P39115|EXPZ_BACSU NUCLEOTIDE BINDING PROTEIN EXPZ >gi|7445764|pir||G69620 ATP-binding
transport protein expZ - Bacillus subtilis
>gi|1881367|dbj|BAA19394.1| (AB001488) PROBABLE
ATP-BINDING TRANSPORT PROTEIN [Bacillus subtilis]
>gi|2632861|emb|CAB12368.1| (Z99106) ATP-binding
transport protein [Bacillus subtilis]
>gi|2632874|emb|CAB12380.1| (Z99107) ATP-binding
transport protein [Bacillus subtilis]
Length = 547
Score = 71.8 bits (173), Expect = 2e-11
Identities = 55/185 (29%), Positives = 88/185 (46%), Gaps = 36/185 (19%)
Query: 418 EIQDLLKAFGVRHRVIQRPVLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGYWE 477
E+Q++ KAFG +R + +N NFTI GE VA++G +G+GKTTLL +ILG
Sbjct: 293 EVQNVTKAFG------ERTLFKNANFTIQHGEKVAIIGPNGSGKTTLLNIILG------- 339
Query: 478 EKYRPTSGKIEVPKNAKVSVL------IPGEIEPE--FGSETILE--HVYRKIRDLNAAV 527
G + V +A + L +P E PE F +ET HV +R L
Sbjct: 340 --QETAEGSVWVSPSANIGYLTQEVFDLPLEQTPEELFENETFKARGHVQNLMRHLGFT- 396
Query: 528 EVLNRAGLSDAVLYRAKFSELSTGQKERAKIASLLAERPNVLLIDEFAAHLDTLTAMRVA 587
A + +S G++ + K+ + + E +VL++DE HLD + ++
Sbjct: 397 ----------AAQWTEPIKHMSMGERVKIKLMAYILEEKDVLILDEPTNHLDLPSREQLE 446
Query: 588 RKVSE 592
+S+
Sbjct: 447 ETLSQ 451
>gb|AAD15830.1| (AF062387) TAP2 protein [Xenopus laevis]
Length = 720
Score = 71.8 bits (173), Expect = 2e-11
Identities = 69/247 (27%), Positives = 109/247 (43%), Gaps = 45/247 (18%)
Query: 393 LEGPIVFKNVTKVFESELDIKGLPQEIQDLLKAFGVRHRVIQRPVLRNLNFTINPGEVVA 452
L G FKNVT + S D P L+N++F + PG V A
Sbjct: 466 LRGQFEFKNVTFSYPSRPDA-----------------------PSLQNVSFKLPPGSVTA 502
Query: 453 VVGASGAGKTTLLRLI-------LGAI--KGYWEEKYRPTSGKIEVPKNAKVSVLIPGEI 503
+VG SG GKTT + L+ +GAI G +Y+ +V A+ VL G I
Sbjct: 503 LVGPSGGGKTTCVSLLERFYEPQIGAILLDGIPLGEYKHQYLHSKVALVAQEPVLFAGTI 562
Query: 504 EPEFG------SETILEHVYRKIRDLNAAVEVLNRAGLSDAVLYRAKFSELSTGQKERAK 557
G SE L+ RK + + + + + +D + ++LS GQK+R
Sbjct: 563 RENIGYGLKDISEKQLKEAARKAK-ADTFISEMEKLYDTDVL---DSGAQLSAGQKQRVA 618
Query: 558 IASLLAERPNVLLIDEFAAHLDTLTAMRVARKVSEIVREAGITAVIITHRPEVVKALDPD 617
+A LA +P +L++DE ++ LD T + + + + ++ +II HR ++ D
Sbjct: 619 LARALARKPKLLILDEASSCLDAETEHEIQQSLQTL---PDVSLLIIAHRLRTIQKADNI 675
Query: 618 KVLFVGY 624
VL GY
Sbjct: 676 LVLEGGY 682
>gb|AAD49436.1|AF083642_1 (AF083642) P-glycoprotein [Onchocerca volvulus]
Length = 1278
Score = 71.8 bits (173), Expect = 2e-11
Identities = 64/215 (29%), Positives = 101/215 (46%), Gaps = 33/215 (15%)
Query: 434 QRPVLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGYWEEKYRPTSGKIEVPKNA 493
QR VL LN G+ VAV G SG+GK+T++ L+ E YR SG++ + N+
Sbjct: 1051 QRNVLNGLNLAAYAGQTVAVTGPSGSGKSTVIALL--------ERFYRFNSGQLTLDDNS 1102
Query: 494 --KVS-------VLIPGEIEPEFGSETILEHVY-----RKIRDLNAAVEVLNRAGLSDAV 539
K+S + + G+ EP S TILE++ + + D+ A ++ N +
Sbjct: 1103 ITKISLRYLREQIALVGQ-EPILFSGTILENILLGTTGKTLSDVREACKIANIIDFIETS 1161
Query: 540 L--YRAKFSE----LSTGQKERAKIASLLAERPNVLLIDEFAAHLDTLTAMRVARKVSEI 593
Y + E LS GQK+R IA L P +LL+DE + LD V + +
Sbjct: 1162 PKGYDTEVGEHGVQLSGGQKQRIAIARALVRNPKILLLDEATSALDAECERTVQQALD-- 1219
Query: 594 VREAGITAVIITHRPEVVKALDPDKVLFVGYGTVI 628
+G T + + HR ++ D++ FV G V+
Sbjct: 1220 AASSGRTCITVAHRLSSIQ--HADQIFFVENGKVV 1252
>pir||G75548 ABC transporter, ATP-binding protein - Deinococcus radiodurans
(strain R1) >gi|6457873|gb|AAF09790.1|AE001882_8
(AE001882) ABC transporter, ATP-binding protein
[Deinococcus radiodurans]
Length = 354
Score = 71.8 bits (173), Expect = 2e-11
Identities = 58/211 (27%), Positives = 98/211 (45%), Gaps = 43/211 (20%)
Query: 418 EIQDLLKAFGVRHRVIQRPVLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGYWE 477
E++ L K+F ++P +++++F+I GE+V +G +GAGK+T ++++ G +
Sbjct: 48 EVRHLCKSFA------RKPAVQDISFSIPAGEIVGYLGPNGAGKSTTIKVLTGLLV---- 97
Query: 478 EKYRPTSGKIEVP-----KNAKVSVLIPGEIEPEFGSET-------------ILEHVYRK 519
P SG++ V K + V G + FG T +L HVYR
Sbjct: 98 ----PDSGEVRVGGLVPWKQRRQHVARLGAV---FGQRTTLWWDLPVRESLELLRHVYR- 149
Query: 520 IRDLNAAVEVLNRAGLSDAV----LYRAKFSELSTGQKERAKIASLLAERPNVLLIDEFA 575
+ AA N AG ++ + LS GQ+ RA +A+ L P +L +DE
Sbjct: 150 ---VPAARFAENLAGFTELLELGPFLNTPARALSLGQRMRADLAAALLHDPELLFLDEPT 206
Query: 576 AHLDTLTAMRVARKVSEIVREAGITAVIITH 606
LD + R+ V + E G+T ++ TH
Sbjct: 207 VGLDVVAKERIREFVKAVNAERGVTVLLTTH 237
>gb|AAF48177.1| (AE003489) CG1824 gene product [Drosophila melanogaster]
Length = 761
Score = 71.8 bits (173), Expect = 2e-11
Identities = 60/212 (28%), Positives = 106/212 (49%), Gaps = 32/212 (15%)
Query: 437 VLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGYWEEKYRPTSGKIEV------- 489
VL++ + T+ PG+ VA+VGASG+GK+T+ L+ E Y P++G I++
Sbjct: 479 VLKDFSLTLRPGQTVALVGASGSGKSTIASLV--------ERFYEPSAGNIKLDGYKLSD 530
Query: 490 --PKNAKVSVLIPGEIEPEFGSETILEHV-YRK----IRDLNAAVEVLNR----AGLSD- 537
P + +VL E +P +ILE++ Y K D+ AA + L D
Sbjct: 531 ISPYWLRSNVLGFIEQQPVLFGTSILENIRYGKPDAGEEDVYAAARLSQSHDFVTALPDG 590
Query: 538 -AVLYRAKFSELSTGQKERAKIASLLAERPNVLLIDEFAAHLDTLTAMRVARKVSEIVRE 596
A + ++LS GQ++R IA L + P +L++DE + LD + V + + +V+
Sbjct: 591 YATHVGERGTQLSGGQRQRIAIARALLKNPRILILDEATSALDATSEAEVQKALDTVVQN 650
Query: 597 AGITAVIITHRPEVVKALDPDKVLFVGYGTVI 628
T ++I HR ++ + D ++ + G V+
Sbjct: 651 R--TTLVIAHRLSTIR--NADLIVVLDQGRVV 678
>sp|P36637|SAPF_ECOLI PEPTIDE TRANSPORT SYSTEM ATP-BINDING PROTEIN SAPF
>gi|7445934|pir||E64877 peptide transport system
ATP-binding protein sapF - Escherichia coli
>gi|470683|gb|AAA17671.1| (U08190) Shows similarity with
ATP-binding proteins from other ABC-transport operons,
Swiss Prot Accession Numbers P24137, P08007, P04285,
P24136 [Escherichia coli] >gi|1279404|emb|CAA65941.1|
(X97282) SapF protein [Escherichia coli]
>gi|1742103|dbj|BAA14843.1| (D90766) Peptide transport
system ATP-binding protein SapF. [Escherichia coli]
>gi|1742112|dbj|BAA14851.1| (D90767) Peptide transport
system ATP-binding protein SapF. [Escherichia coli]
>gi|1787547|gb|AAC74372.1| (AE000227) putative
ATP-binding protein of peptide transport system
[Escherichia coli K12]
Length = 268
Score = 71.4 bits (172), Expect = 3e-11
Identities = 62/239 (25%), Positives = 113/239 (46%), Gaps = 35/239 (14%)
Query: 418 EIQDLLKAFGVRHRVIQRPVL---RNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIKG 474
E+++L K F R +R + + L+FT+ G+ +A++G +G+GK+TL +++ G I+
Sbjct: 7 EVRNLSKTFRYRTGWFRRQTVEAVKPLSFTLREGQTLAIIGENGSGKSTLAKMLAGMIE- 65
Query: 475 YWEEKYRPTSGKIEVP-----------KNAKVSVLIPG---EIEPEFGSETILEHVYRKI 520
PTSG++ + ++ ++ ++ + P IL+ R
Sbjct: 66 -------PTSGELLIDDHPLHFGDYSFRSQRIRMIFQDPSTSLNPRQRISQILDFPLRLN 118
Query: 521 RDLNAA------VEVLNRAGL-SDAVLYRAKFSELSTGQKERAKIASLLAERPNVLLIDE 573
DL +E + GL D V Y L+ GQK+R +A L RP V++ DE
Sbjct: 119 TDLEPEQRRKQIIETMRMVGLLPDHVSYYPHM--LAPGQKQRLGLARALILRPKVIIADE 176
Query: 574 FAAHLDTLTAMRVARKVSEIVREAGITAVIITHRPEVVKALDPDKVLFVGYGTVIVRKS 632
A LD ++ + E+ + GI+ + +T ++K + D+VL + G V+ R S
Sbjct: 177 ALASLDMSMRSQLINLMLELQEKQGISYIYVTQHIGMMKHIS-DQVLVMHQGEVVERGS 234
>sp|Q60350|Y035_METJA HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PROTEIN MJ0035
>gi|2127733|pir||C64304 ABC transporter subunit -
Methanococcus jannaschii >gi|1590838|gb|AAB98016.1|
(U67462) ABC transporter subunit [Methanococcus
jannaschii]
Length = 250
Score = 71.4 bits (172), Expect = 3e-11
Identities = 55/214 (25%), Positives = 109/214 (50%), Gaps = 29/214 (13%)
Query: 435 RPVLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGYWEEKYRPTSGKI------- 487
R +L+ +N T+ E+ A++G +GAGK+TL I+G I G Y+PT G+I
Sbjct: 19 REILKGVNLTVEENEIHAIIGPNGAGKSTLAYTIMG-ISG-----YKPTKGRIIFKGVDI 72
Query: 488 ---EVPKNAKVSVLIPGEIEPEFGSETILEHV-------YRKIRDL--NAAVEVLNRAGL 535
+ + A++ + + + F + ++ Y+K +++ E L L
Sbjct: 73 IDKNITERARMGMTLAWQEPARFEGIKVKNYLMLGMNEKYKKDKEIAEEKIREALKLVNL 132
Query: 536 S-DAVLYRAKFSELSTGQKERAKIASLLAERPNVLLIDEFAAHLDTLTAMRVARKVSEIV 594
D L R LS G+++R ++AS++ P++ ++DE + +D ++ + ++V + +
Sbjct: 133 DPDKYLDRYVDETLSGGERKRIELASIICMEPDLAILDEPDSGIDIVSFDEI-KRVFDYL 191
Query: 595 REAGITAVIITHRPEVVKALDPDKVLFVGYGTVI 628
++ G + ++ITHR E+ A D+V + G VI
Sbjct: 192 KDKGCSLLVITHREEL--AEHADRVSLICAGEVI 223
>pir||H71302 probable ABC transporter, ATP-binding protein - syphilis spirochete
>gi|3322909|gb|AAC65587.1| (AE001236) ABC transporter,
ATP-binding protein [Treponema pallidum]
Length = 259
Score = 71.4 bits (172), Expect = 3e-11
Identities = 60/212 (28%), Positives = 103/212 (48%), Gaps = 16/212 (7%)
Query: 432 VIQRPVLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGYWEEKYRPTSGK----I 487
+ RP+L++LN T+N GEV AV+G +GAGK+TL I+G E G+ +
Sbjct: 14 IADRPILKSLNLTLNTGEVHAVMGPNGAGKSTLAGTIVGNPHCTIERGEIYFQGQCINDV 73
Query: 488 EVPKNAKVSVLIPGEIEPEFGSETILEHV-YRKIRDLNAAVEVLN----------RAGLS 536
V + A+ + + + E ++ E + K L V VL+ R +S
Sbjct: 74 PVYERARRGIFLSFQTPEEVPGLSVEEFLRAAKEAVLGTKVSVLDFHTQLRAKLARLRIS 133
Query: 537 DAVLYRAKFSELSTGQKERAKIASLLAERPNVLLIDEFAAHLDTLTAMRVARKVSEIVRE 596
+A R S G+K++ +I L P + ++DE + LD + A R+ + + +R
Sbjct: 134 EAYASRGLNVGFSGGEKKKNEILQLAVLEPKLAILDETDSGLD-VDATRIVFEGIDDIRT 192
Query: 597 AGITAVIITHRPEVVKALDPDKVLFVGYGTVI 628
+ +IITH EV++ + PD V + GT++
Sbjct: 193 PDMGFLIITHHREVLEYIKPDVVHILVDGTIV 224
>gi|10956101 ABC transporter subunit PenL [Pediococcus pentosaceus]
>gi|10956124|ref|NP_037576.1| putative ABC transporter
ATP-binding subunit [Pediococcus pentosaceus]
>gi|4587880|gb|AAD25906.1|AF069302_15 (AF069302) ABC
transporter subunit PenL [Pediococcus pentosaceus]
>gi|5091682|gb|AAD39629.1|AF033858_12 (AF033858)
putative ABC transporter ATP-binding subunit
[Pediococcus pentosaceus]
Length = 313
Score = 71.4 bits (172), Expect = 3e-11
Identities = 62/235 (26%), Positives = 112/235 (47%), Gaps = 42/235 (17%)
Query: 417 QEIQDLLKAFGVRHRVIQRPVLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGYW 476
++I +L V + Q+ V+ +++F++ G+++A++G +GAGKTT++RLI I+
Sbjct: 2 EDIPLILTLSKVNKSISQKKVINDVSFSLEKGKILALLGPNGAGKTTIIRLITSLIE--- 58
Query: 477 EEKYRPTSGKIEV------PKNAK--VSVLIPGEIEPEFGSETILE-------------- 514
SG I V P N + +SV G + + + TI E
Sbjct: 59 -----QDSGVISVFNGDINPSNIRQNISVQNDGNL---YENLTIFENLKIWGGFYEIPED 110
Query: 515 HVYRKIRDLNAAVEVLNRAGLSDAVLYRAKFSELSTGQKERAKIASLLAERPNVLLIDEF 574
H+ KI +L + E+ R +K ELS G K++ I L P +L++DE
Sbjct: 111 HLEVKISELTSRFEISER--------LNSKVGELSKGMKQKVLIIRALLTNPKLLILDEP 162
Query: 575 AAHLDTLTAMRVARKVSEIVREAGITAVIITHRPEVVKALDPDKVLFVGYGTVIV 629
+ LD + + ++E V+ T ++ TH+ ++++ D VL + G V+V
Sbjct: 163 TSGLDPYMIDLLTKILTEYVKRHETTIIMATHQLLGLESI-ADDVLILNKGEVVV 216
>gb|AAF55241.1| (AE003710) CG4225 gene product [Drosophila melanogaster]
Length = 866
Score = 71.4 bits (172), Expect = 3e-11
Identities = 59/214 (27%), Positives = 105/214 (48%), Gaps = 27/214 (12%)
Query: 434 QRPVLRNLNFTINPGEVVAVVGASGAGKTTLLRLIL-------GAIKGYWEEKYRPTSGK 486
++ VLRN++FT+ G+ VA+VG SGAGK+T++RL+ GAI + K
Sbjct: 588 EKIVLRNVSFTVPAGKTVAIVGPSGAGKSTIMRLLFRFYDVQTGAI------LIDGQNIK 641
Query: 487 IEVPKNAKVSVLIPGEIEPEFGSETILEHVYRKIRDLNAAV-EVLNRAGLSDAVL----- 540
+ ++ + ++ + + F + Y K+ + AV E A + + +L
Sbjct: 642 LVQQQSLRKAIGVVPQDTVLFNNTIFYNIEYAKLGASDEAVYEAARAADIHERILGFPEK 701
Query: 541 YRAKFSE----LSTGQKERAKIASLLAERPNVLLIDEFAAHLDTLTAMRVARKVSEIVRE 596
Y K E LS G+K+R IA L + P ++L+DE + LDT T + ++ +
Sbjct: 702 YETKVGERGLRLSGGEKQRVAIARTLLKAPIIVLLDEATSALDTHTERNIQAALARVC-- 759
Query: 597 AGITAVIITHRPEVVKALDPDKVLFVGYGTVIVR 630
A T +I+ HR + + D++L + G++ R
Sbjct: 760 ANRTTIIVAHRLSTI--IHADEILVLQQGSIAER 791
>pir||E81936 probable amino acid permease ATP-binding protein NMA0900 [imported]
- Neisseria meningitidis (group A strain Z2491)
>gi|7379613|emb|CAB84178.1| (AL162754) putative amino
acid permease ATP-binding protein [Neisseria
meningitidis Z2491]
Length = 242
Score = 71.4 bits (172), Expect = 3e-11
Identities = 67/207 (32%), Positives = 105/207 (50%), Gaps = 22/207 (10%)
Query: 437 VLRNLNFTINPGEVVAVVGASGAGKTTLLRLI--LGAIKG--YWEEKYRPTSGKIEVPK- 491
V+ +N I GEVV V G SG+GK+TL+R + L +I+ W + K ++ K
Sbjct: 16 VINGVNLEIKKGEVVVVCGPSGSGKSTLIRTVNQLESIESGEIWVDGVNVADPKTDLNKI 75
Query: 492 NAKVSVLIPG-EIEPEFGSETILEHVY---RKIRDLNA------AVEVLNRAGLSDAVLY 541
+V + + P T+LE++ K++ NA A+E+L R GL A
Sbjct: 76 REEVGFVFQSFNLYPHL---TVLENITLAPMKVKGQNAEQAEKKAMELLERVGL--AHKK 130
Query: 542 RAKFSELSTGQKERAKIASLLAERPNVLLIDEFAAHLDTLTAMRVARKVSEIVREAGITA 601
A S+LS GQ++R IA LA P V+L DE + LD V KV + + E+G+T
Sbjct: 131 DAFPSQLSGGQQQRVAIARGLAMEPRVMLFDEPTSALDPEMVGEVL-KVMKDLAESGMTM 189
Query: 602 VIITHRPEVVKALDPDKVLFVGYGTVI 628
+ +TH + + D+V+FV G ++
Sbjct: 190 MCVTHEMGFAREV-ADRVIFVDKGQIL 215
>dbj|BAB05744.1| (AP001514) ABC transporter (ATP-binding protein) [Bacillus
halodurans]
Length = 539
Score = 71.4 bits (172), Expect = 3e-11
Identities = 62/237 (26%), Positives = 111/237 (46%), Gaps = 20/237 (8%)
Query: 389 KVEMLEGPIVFKNVTKVFESELDIKGLPQEIQDLLKAFGVRHRVIQRPVLRNLNFTINPG 448
++E+L+ PI+ + +LD + D++ V +R + ++ +
Sbjct: 304 RIELLKKPILQHK-----KVDLDFHIQNRSGTDVIMMENVAKTYGERELFHDVQLHVRFQ 358
Query: 449 EVVAVVGASGAGKTTLLRLILGAIKGYWEEKYRPTSGKIEVPKNAKVSVLIPGEIEPEFG 508
E VA+VG +G+GK+TLL +ILG K +P G+I++ N + L E + G
Sbjct: 359 ERVAIVGENGSGKSTLLNMILG--------KQQPEKGRIQIGSNVSIGYLSQHNEEMD-G 409
Query: 509 SETILEHVYRKIRDLNA-AVEVLNRAGLSDAVLYRAKFSELSTGQKERAKIASLLAERPN 567
+TILE K+ A +L R ++R K +LS G++ R ++A L+ +R N
Sbjct: 410 KKTILEEFRAKVTVTEGEARHILARYLFYGNTVFR-KVKDLSGGERMRLRLAQLVHQRHN 468
Query: 568 VLLIDEFAAHLDTLTAMRVARKVSEIVREAGITAVIITHRPEVVKALDPDKVLFVGY 624
+L++DE HLD + + E + E T + ++H + L P G+
Sbjct: 469 LLILDEPTNHLD----IDSREVLEEALSEFQGTVIAVSHDRYFLDRLFPVTYWLAGH 521
>sp|Q00748|MDR5_DROME MULTIDRUG RESISTANCE PROTEIN HOMOLOG 65 (P-GLYCOPROTEIN 65)
>gi|103252|pir||B41249 multidrug resistance protein
homolog Mdr65 - fruit fly (Drosophila melanogaster)
>gi|157875|gb|AAA28680.1| (M59077) P-glycoprotein
[Drosophila melanogaster]
Length = 1302
Score = 71.0 bits (171), Expect = 4e-11
Identities = 65/231 (28%), Positives = 112/231 (48%), Gaps = 36/231 (15%)
Query: 418 EIQDLLKAFGVRHRVIQRPVLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGYWE 477
E QD+ + R VI V R LN I G+ VA+VG+SG GK+T ++L+ +
Sbjct: 406 EFQDVFFRYPSRPEVI---VHRGLNIRIRAGQTVALVGSSGCGKSTCVQLL--------Q 454
Query: 478 EKYRPTSGKI-----EVPKN----AKVSVLIPGEIEPEFGSETILEHV-YRKIRDLNAAV 527
Y P G + ++ K + ++ + G+ EP TI +++ Y K +
Sbjct: 455 RFYDPVFGSVLLDDLDIRKYNIQWLRSNIAVVGQ-EPVLFLGTIAQNISYGKPGATQKEI 513
Query: 528 EVL-NRAGLSDAVL-----YRAKF----SELSTGQKERAKIASLLAERPNVLLIDEFAAH 577
E +AG + + YR+ S+LS GQK+R IA L + P +LL+DE +
Sbjct: 514 EAAATQAGAHEFITNLPESYRSMIGERGSQLSGGQKQRIAIARALIQNPKILLLDEATSA 573
Query: 578 LDTLTAMRVARKVSEIVREAGITAVIITHRPEVVKALDPDKVLFVGYGTVI 628
LD + +V + + + G T ++++HR ++ DK++F+ G V+
Sbjct: 574 LDYQSEKQVQQALD--LASKGRTTIVVSHRLSAIRG--ADKIVFIHDGKVL 620
>sp|P36371|TAP2_MOUSE ANTIGEN PEPTIDE TRANSPORTER 2 (APT2) (HISTOCOMPATIBILITY ANTIGEN
MODIFIER 2) >gi|346732|pir||A44135 histocompatibility
antigen modifier 2 - mouse >gi|199434|gb|AAA39609.1|
(M90459) HAM2 [Mus musculus] >gi|2555194|gb|AAB81533.1|
(AF027865) antigen processing transporter TAP2 [Mus
musculus]
Length = 702
Score = 71.0 bits (171), Expect = 4e-11
Identities = 60/220 (27%), Positives = 105/220 (47%), Gaps = 35/220 (15%)
Query: 434 QRPVLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGYWEEKYRPTSGKIEVPKNA 493
++PVL+ L FT++PG V A+VG +G+GK+T+ L+ + Y+PT G++ +
Sbjct: 481 EKPVLQGLTFTLHPGTVTALVGPNGSGKSTVAALL--------QNLYQPTGGQLLLDGEP 532
Query: 494 KV---------SVLIPGEIEPEFGSETILEHVYRKIRDL-NAAVEVLNRAGLSDAVL--- 540
V++ G+ EP S ++ +++ +RD +A V +A +D +
Sbjct: 533 LTEYDHHYLHRQVVLVGQ-EPVLFSGSVKDNIAYGLRDCEDAQVMAAAQAACADDFIGEM 591
Query: 541 -------YRAKFSELSTGQKERAKIASLLAERPNVLLIDEFAAHLDTLTAMRVARKVSEI 593
K +L+ GQK+R IA L P VL++DE + LD + S+
Sbjct: 592 TNGINTEIGEKGGQLAVGQKQRLAIARALVRNPRVLILDEATSALDAQCEQALQNWRSQG 651
Query: 594 VREAGITAVIITHRPEVVKALDPDKVLFVGYGTVIVRKSL 633
R T ++I HR V+ + D+VL + G ++ L
Sbjct: 652 DR----TMLVIAHRLHTVQ--NADQVLVLKQGRLVEHDQL 685
>pir||T30855 multidrug resistance protein 2 - fluke (Schistosoma mansoni)
>gi|425476|gb|AAA66477.1| (L26287) SMDR2 [Schistosoma
mansoni]
Length = 1254
Score = 71.0 bits (171), Expect = 4e-11
Identities = 69/257 (26%), Positives = 114/257 (43%), Gaps = 43/257 (16%)
Query: 398 VFKNVTKVFESELDIKGLPQEIQDLLKAFGVRHRVIQRP------VLRNLNFTINPGEVV 451
+F + V E E +G + + D + RH P +L N T+ G+ +
Sbjct: 337 IFATIDHVCEIEKKDRG--KILSDFDGSITFRHVNFNYPSRPDVTILVNFCLTVKSGQTI 394
Query: 452 AVVGASGAGKTTLLRLILGAIKGYWEEKYRPTSGKIEVPKNAKVSVLIPG--------EI 503
A+VG+SG+GK+TL+ ++ + Y PT G+I + + I +
Sbjct: 395 ALVGSSGSGKSTLIHML--------QRFYDPTQGEILIQGVDLRELNIHNYRNQIGCVQQ 446
Query: 504 EPEFGSETILEHVYRKIRDLNAAVEVLNRAGLSDAV-------------LYRAKFSELST 550
EP TI E++ + LNA E ++ A + L K S LS
Sbjct: 447 EPVLFDGTIRENI--GLGKLNATDEEIHEAAIKANAHQFIMRLPQGYDTLVGEKGSNLSG 504
Query: 551 GQKERAKIASLLAERPNVLLIDEFAAHLDTLTAMRVARKVSEIVREAGITAVIITHRPEV 610
GQK+R IA +L +P +LL+DE + LDT + V + +IV G T +II HR
Sbjct: 505 GQKQRIAIARVLIRKPKLLLLDEATSALDTQSERIVQGALDKIV--GGCTVIIIAHRLST 562
Query: 611 VKALDPDKVLFVGYGTV 627
+ ++ D ++ + G +
Sbjct: 563 I--INADYIIVLDQGCI 577
>sp|Q61102|ABC7_MOUSE ATP-BINDING CASSETTE, SUB-FAMILY B, MEMBER 7, MITOCHONDRIAL
(ATP-BINDING CASSETTE TRANSPORTER 7) (ABC TRANSPORTER 7
PROTEIN) >gi|1167982|gb|AAC53152.1| (U43892) ABC
transporter-7 [Mus musculus]
Length = 694
Score = 71.0 bits (171), Expect = 4e-11
Identities = 62/214 (28%), Positives = 104/214 (47%), Gaps = 33/214 (15%)
Query: 437 VLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGYWEEKYRPTSGKIEVPKNAKVS 496
VL ++F + G+ VA+VG SG+GK+T++RL+ Y P G I +
Sbjct: 429 VLNGVSFEVPAGKKVAIVGGSGSGKSTIVRLLF--------RFYEPQKGSIYLAGQNLQD 480
Query: 497 VLIPGEIEPEFG---SETILEH--VYRKI--RDLNAAVE----VLNRAGLSDAVL----- 540
V + + G + +L H +Y + ++NA+ E V AGL DA+L
Sbjct: 481 VSLE-SLRRAVGVVPQDAVLFHNTIYYNLLYGNINASPEEVYAVAKLAGLHDAILRMPHG 539
Query: 541 YRAKFSE----LSTGQKERAKIASLLAERPNVLLIDEFAAHLDTLTAMRVARKVSEIVRE 596
Y + E LS G+K+R IA + + P V+L DE + LD++T + + ++V+
Sbjct: 540 YDTQVGERGLKLSGGEKQRVAIARAILKNPPVILYDEATSSLDSITEETILGAMRDVVKH 599
Query: 597 AGITAVIITHRPEVVKALDPDKVLFVGYGTVIVR 630
T++ I HR V +D D+++ + G V R
Sbjct: 600 R--TSIFIAHRLSTV--VDADEIIVLSQGKVAER 629
>gb|AAB41968.1| (U60091) TAP2 [Mus musculus castaneus]
Length = 703
Score = 71.0 bits (171), Expect = 4e-11
Identities = 60/220 (27%), Positives = 105/220 (47%), Gaps = 35/220 (15%)
Query: 434 QRPVLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGYWEEKYRPTSGKIEVPKNA 493
++PVL+ L FT++PG V A+VG +G+GK+T+ L+ + Y+PT G++ +
Sbjct: 482 EKPVLQGLTFTLHPGTVTALVGPNGSGKSTVAALL--------QNLYQPTGGQLLLDGEP 533
Query: 494 KV---------SVLIPGEIEPEFGSETILEHVYRKIRDL-NAAVEVLNRAGLSDAVL--- 540
V++ G+ EP S ++ +++ +RD +A V +A +D +
Sbjct: 534 LTEYDHHYLHRQVVLVGQ-EPVLFSGSVKDNIAYGLRDCEDAQVMAAAQAACADDFIGEM 592
Query: 541 -------YRAKFSELSTGQKERAKIASLLAERPNVLLIDEFAAHLDTLTAMRVARKVSEI 593
K +L+ GQK+R IA L P VL++DE + LD + S+
Sbjct: 593 TNGINTEIGEKGGQLAVGQKQRLAIARALVRNPRVLILDEATSALDAQCEQALQNWRSQG 652
Query: 594 VREAGITAVIITHRPEVVKALDPDKVLFVGYGTVIVRKSL 633
R T ++I HR V+ + D+VL + G ++ L
Sbjct: 653 DR----TMLVIAHRLHTVQ--NADQVLVLKQGRLVEHDQL 686
>gb|AAB41969.1| (U60092) TAP2 [Mus musculus castaneus]
Length = 702
Score = 71.0 bits (171), Expect = 4e-11
Identities = 60/220 (27%), Positives = 105/220 (47%), Gaps = 35/220 (15%)
Query: 434 QRPVLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGYWEEKYRPTSGKIEVPKNA 493
++PVL+ L FT++PG V A+VG +G+GK+T+ L+ + Y+PT G++ +
Sbjct: 481 EKPVLQGLTFTLHPGTVTALVGPNGSGKSTVAALL--------QNLYQPTGGQLLLDGEP 532
Query: 494 KV---------SVLIPGEIEPEFGSETILEHVYRKIRDL-NAAVEVLNRAGLSDAVL--- 540
V++ G+ EP S ++ +++ +RD +A V +A +D +
Sbjct: 533 LTEYDHHYLHRQVVLVGQ-EPVLFSGSVKDNIAYGLRDCEDAQVMAAAQAACADDFIGEM 591
Query: 541 -------YRAKFSELSTGQKERAKIASLLAERPNVLLIDEFAAHLDTLTAMRVARKVSEI 593
K +L+ GQK+R IA L P VL++DE + LD + S+
Sbjct: 592 TNGINTEIGEKGGQLAVGQKQRLAIARALVRNPRVLILDEATSALDAQCEQALQNWRSQG 651
Query: 594 VREAGITAVIITHRPEVVKALDPDKVLFVGYGTVIVRKSL 633
R T ++I HR V+ + D+VL + G ++ L
Sbjct: 652 DR----TMLVIAHRLHTVQ--NADQVLVLKQGRLVEHDQL 685
>gb|AAB41970.1| (U60087) TAP2 [Mus musculus]
Length = 703
Score = 71.0 bits (171), Expect = 4e-11
Identities = 60/220 (27%), Positives = 105/220 (47%), Gaps = 35/220 (15%)
Query: 434 QRPVLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGYWEEKYRPTSGKIEVPKNA 493
++PVL+ L FT++PG V A+VG +G+GK+T+ L+ + Y+PT G++ +
Sbjct: 482 EKPVLQGLTFTLHPGTVTALVGPNGSGKSTVAALL--------QNLYQPTGGQLLLDGEP 533
Query: 494 KV---------SVLIPGEIEPEFGSETILEHVYRKIRDL-NAAVEVLNRAGLSDAVL--- 540
V++ G+ EP S ++ +++ +RD +A V +A +D +
Sbjct: 534 LTEYDHHYLHRQVVLVGQ-EPVLFSGSVKDNIAYGLRDCEDAQVMAAAQAACADDFIGEM 592
Query: 541 -------YRAKFSELSTGQKERAKIASLLAERPNVLLIDEFAAHLDTLTAMRVARKVSEI 593
K +L+ GQK+R IA L P VL++DE + LD + S+
Sbjct: 593 TNGINTEIGEKGGQLAVGQKQRLAIARALVRNPRVLILDEATSALDAQCEQALQNWRSQG 652
Query: 594 VREAGITAVIITHRPEVVKALDPDKVLFVGYGTVIVRKSL 633
R T ++I HR V+ + D+VL + G ++ L
Sbjct: 653 DR----TMLVIAHRLHTVQ--NADQVLVLKQGRLVEHDQL 686
>gb|AAB41971.1| (U60088) TAP2 [Mus musculus]
Length = 703
Score = 71.0 bits (171), Expect = 4e-11
Identities = 60/220 (27%), Positives = 105/220 (47%), Gaps = 35/220 (15%)
Query: 434 QRPVLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGYWEEKYRPTSGKIEVPKNA 493
++PVL+ L FT++PG V A+VG +G+GK+T+ L+ + Y+PT G++ +
Sbjct: 482 EKPVLQGLTFTLHPGTVTALVGPNGSGKSTVAALL--------QNLYQPTGGQLLLDGEP 533
Query: 494 KV---------SVLIPGEIEPEFGSETILEHVYRKIRDL-NAAVEVLNRAGLSDAVL--- 540
V++ G+ EP S ++ +++ +RD +A V +A +D +
Sbjct: 534 LTEYDHHYLHRQVVLVGQ-EPVLFSGSVKDNIAYGLRDCEDAQVMAAAQAACADDFIGEM 592
Query: 541 -------YRAKFSELSTGQKERAKIASLLAERPNVLLIDEFAAHLDTLTAMRVARKVSEI 593
K +L+ GQK+R IA L P VL++DE + LD + S+
Sbjct: 593 TNGINTEIGEKGGQLAVGQKQRLAIARALVRNPRVLILDEATSALDAQCEQALQNWRSQG 652
Query: 594 VREAGITAVIITHRPEVVKALDPDKVLFVGYGTVIVRKSL 633
R T ++I HR V+ + D+VL + G ++ L
Sbjct: 653 DR----TMLVIAHRLHTVQ--NADQVLVLKQGRLVEHDQL 686
>gb|AAB41972.1| (U60089) TAP2 [Mus musculus]
Length = 703
Score = 71.0 bits (171), Expect = 4e-11
Identities = 60/220 (27%), Positives = 105/220 (47%), Gaps = 35/220 (15%)
Query: 434 QRPVLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGYWEEKYRPTSGKIEVPKNA 493
++PVL+ L FT++PG V A+VG +G+GK+T+ L+ + Y+PT G++ +
Sbjct: 482 EKPVLQGLTFTLHPGTVTALVGPNGSGKSTVAALL--------QNLYQPTGGQLLLDGEP 533
Query: 494 KV---------SVLIPGEIEPEFGSETILEHVYRKIRDL-NAAVEVLNRAGLSDAVL--- 540
V++ G+ EP S ++ +++ +RD +A V +A +D +
Sbjct: 534 LTEYDHHYLHRQVVLVGQ-EPVLFSGSVKDNIAYGLRDCEDAQVMAAAQAACADDFIGEM 592
Query: 541 -------YRAKFSELSTGQKERAKIASLLAERPNVLLIDEFAAHLDTLTAMRVARKVSEI 593
K +L+ GQK+R IA L P VL++DE + LD + S+
Sbjct: 593 TNGINTEIGEKGGQLAVGQKQRLAIARALVRNPRVLILDEATSALDAQCEQALQNWRSQG 652
Query: 594 VREAGITAVIITHRPEVVKALDPDKVLFVGYGTVIVRKSL 633
R T ++I HR V+ + D+VL + G ++ L
Sbjct: 653 DR----TMLVIAHRLHTVQ--NADQVLVLKQGRLVEHDQL 686
>gi|7549791 ATP-binding cassette, sub-family B, member 3; ATP dependent
transport protein family member; peptide supply factor
2; histocompatibility antigen modifier 2 [Mus musculus]
>gi|1399929|gb|AAB41973.1| (U60090) TAP2 [Mus musculus]
Length = 703
Score = 71.0 bits (171), Expect = 4e-11
Identities = 60/220 (27%), Positives = 105/220 (47%), Gaps = 35/220 (15%)
Query: 434 QRPVLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGYWEEKYRPTSGKIEVPKNA 493
++PVL+ L FT++PG V A+VG +G+GK+T+ L+ + Y+PT G++ +
Sbjct: 482 EKPVLQGLTFTLHPGTVTALVGPNGSGKSTVAALL--------QNLYQPTGGQLLLDGEP 533
Query: 494 KV---------SVLIPGEIEPEFGSETILEHVYRKIRDL-NAAVEVLNRAGLSDAVL--- 540
V++ G+ EP S ++ +++ +RD +A V +A +D +
Sbjct: 534 LTEYDHHYLHRQVVLVGQ-EPVLFSGSVKDNIAYGLRDCEDAQVMAAAQAACADDFIGEM 592
Query: 541 -------YRAKFSELSTGQKERAKIASLLAERPNVLLIDEFAAHLDTLTAMRVARKVSEI 593
K +L+ GQK+R IA L P VL++DE + LD + S+
Sbjct: 593 TNGINTEIGEKGGQLAVGQKQRLAIARALVRNPRVLILDEATSALDAQCEQALQNWRSQG 652
Query: 594 VREAGITAVIITHRPEVVKALDPDKVLFVGYGTVIVRKSL 633
R T ++I HR V+ + D+VL + G ++ L
Sbjct: 653 DR----TMLVIAHRLHTVQ--NADQVLVLKQGRLVEHDQL 686
>sp|P54718|YFIB_BACSU HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PROTEIN 1 IN GLVBC
3'REGION >gi|7445716|pir||E69802 ABC transporter
(ATP-binding protein) homolog yfiB - Bacillus subtilis
>gi|1486244|dbj|BAA09106.1| (D50543) unknown [Bacillus
subtilis] >gi|2633145|emb|CAB12650.1| (Z99108) similar
to ABC transporter (ATP-binding protein) [Bacillus
subtilis]
Length = 573
Score = 71.0 bits (171), Expect = 4e-11
Identities = 59/220 (26%), Positives = 107/220 (47%), Gaps = 35/220 (15%)
Query: 429 RHRVIQRPVLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGYWEEKYRPTSGKIE 488
R+ + R LRN++F+ P E +A++GA+G+GK+TL +LI Y+P SG+I
Sbjct: 338 RYPEMDREALRNVSFSAKPRETIAILGATGSGKSTLFQLI--------PRLYQPDSGRIY 389
Query: 489 VPKNAKVSVLIPGEIEPEFG---------SETILEHVY--RKIRDLNAAVEVLNRAGLSD 537
+ + + G + + G S TI E++ ++ L+ ++ A + +
Sbjct: 390 IDEKPVQDIPAEG-LRRQIGYVPQEVLLFSGTIKENIAWGKENASLDEIMDAAKLAQIHE 448
Query: 538 AVL-----YRAKFSE----LSTGQKERAKIASLLAERPNVLLIDEFAAHLDTLTAMRVAR 588
+L Y + LS GQK+R IA L +P +LL+D+ + LD ++
Sbjct: 449 TILKLPNGYDTVLGQRGVNLSGGQKQRISIARALIRKPAILLLDDSTSALD----LQTEA 504
Query: 589 KVSEIVREAGITAVIITHRPEVVKALDPDKVLFVGYGTVI 628
K+ E + T +IIT + + A+ D++L + G +I
Sbjct: 505 KLLEAISTYHCTTLIITQK--ITTAMKADQILLLEDGELI 542
>pir||E69771 ABC transporter (ATP-binding protein) homolog ydbJ - Bacillus
subtilis >gi|1881259|dbj|BAA19286.1| (AB001488) PROBABLE
TRANSPORT ATP BINDING PROTEIN. [Bacillus subtilis]
>gi|2632749|emb|CAB12256.1| (Z99106) similar to ABC
transporter (ATP-binding protein) [Bacillus subtilis]
Length = 308
Score = 71.0 bits (171), Expect = 4e-11
Identities = 56/220 (25%), Positives = 102/220 (45%), Gaps = 10/220 (4%)
Query: 420 QDLLKAFGVRHRVIQRPVLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIK---GYW 476
+ +L G+ ++ + +L+ ++ + GE++ ++G +G+GKTTL+R+I+G +K G
Sbjct: 3 EPILHIEGLDKKIGSKQILKQISMDVMEGEIIGLLGPNGSGKTTLIRIIVGLLKQNSGSV 62
Query: 477 EEKYRPTSGKIEVPKNAKVSVLIPGEIEPEFGSETILEH---VYRKIRDLNAAVEVLNRA 533
+ E A +++ E P L+H +++KI D EV+ R
Sbjct: 63 TISGFQHDTEFEKAMEAVGAIVENPEFYPYLTGWENLKHFANMHKKIAD-ERLDEVVERV 121
Query: 534 GLSDAVLYRAKFSELSTGQKERAKIASLLAERPNVLLIDEFAAHLDTLTAMRVARKVSEI 593
GL+ A+ K S G ++R IA + RP +L++DE LD + E+
Sbjct: 122 GLTSAI--HDKVKTYSLGMRQRLGIAQAILHRPKLLILDEPTNGLDPAGMKDFRDHIKEL 179
Query: 594 VREAGITAVIITHRPEVVKALDPDKVLFVGYGTVIVRKSL 633
G + TH V+ L D+V+ + G + SL
Sbjct: 180 AEMEGTAVLFATHLLREVEDL-CDRVIIIQKGEIKAEVSL 218
>gb|AAF50669.1| (AE003563) Mdr65 gene product [Drosophila melanogaster]
>gi|7767568|gb|AAF69146.1|AF251286_1 (AF251286)
P-glycoprotein [Drosophila melanogaster]
>gi|7767570|gb|AAF69147.1|AF251287_1 (AF251287)
P-glycoprotein [Drosophila melanogaster]
Length = 1302
Score = 71.0 bits (171), Expect = 4e-11
Identities = 65/231 (28%), Positives = 112/231 (48%), Gaps = 36/231 (15%)
Query: 418 EIQDLLKAFGVRHRVIQRPVLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGYWE 477
E QD+ + R VI V R LN I G+ VA+VG+SG GK+T ++L+ +
Sbjct: 406 EFQDVFFRYPSRPEVI---VHRGLNIRIRAGQTVALVGSSGCGKSTCVQLL--------Q 454
Query: 478 EKYRPTSGKI-----EVPKN----AKVSVLIPGEIEPEFGSETILEHV-YRKIRDLNAAV 527
Y P G + ++ K + ++ + G+ EP TI +++ Y K +
Sbjct: 455 RFYDPVFGSVLLDDLDIRKYNIQWLRSNIAVVGQ-EPVLFLGTIAQNISYGKPGATQKEI 513
Query: 528 EVL-NRAGLSDAVL-----YRAKF----SELSTGQKERAKIASLLAERPNVLLIDEFAAH 577
E +AG + + YR+ S+LS GQK+R IA L + P +LL+DE +
Sbjct: 514 EAAATQAGAHEFITNLPESYRSMIGERGSQLSGGQKQRIAIARALIQNPKILLLDEATSA 573
Query: 578 LDTLTAMRVARKVSEIVREAGITAVIITHRPEVVKALDPDKVLFVGYGTVI 628
LD + +V + + + G T ++++HR ++ DK++F+ G V+
Sbjct: 574 LDYQSEKQVQQALD--LASKGRTTIVVSHRLSAIRG--ADKIVFIHDGKVL 620
>gb|AAG32538.1| (AY005472) SalT [Streptococcus salivarius]
Length = 722
Score = 71.0 bits (171), Expect = 4e-11
Identities = 66/250 (26%), Positives = 111/250 (44%), Gaps = 33/250 (13%)
Query: 404 KVFESELDIKGLPQEIQDL------------LKAFGVRHRVIQRPVLRNLNFTINPGEVV 451
K +E L+I L E D LK ++ + VL +N ++ GE V
Sbjct: 449 KHYERVLEISTLDNETNDTYKLSEDTDIEINLKNINYQYELNGAKVLNGINLKVHSGEFV 508
Query: 452 AVVGASGAGKTTLLRLILGAIK-GYWEEKYRPTS-GKIEVPKNAKVSVLIPGEIEPEFGS 509
A++G SG+GKTTL +++LG + + Y S KI+ +S + + P F
Sbjct: 509 AIIGKSGSGKTTLAKMLLGYVSPSSGDITYNNISYSKIDKKDFRNISAFV-SQDSPMFDG 567
Query: 510 ETILE-HVYRKIRDLNAAVEVLNRAGLSD----------AVLYRAKFSELSTGQKERAKI 558
+ + + R+ +E R + D +L+R S +S GQK+R +
Sbjct: 568 DVMYNISLGRESVSGEQVIETCKRVSIYDDIRSMPMKFHTLLFRDNPS-ISGGQKQRISL 626
Query: 559 ASLLAERPNVLLIDEFAAHLDTLTAMRVARKVSEIVREAGITAVIITHRPEVVKALDPDK 618
A L P +L++DE + LD ++ R + + V T V++THR V+ DK
Sbjct: 627 ARELVTTPRILVLDEPTSALD----VKTERIIQKNVEALHCTRVLVTHRLNTVE--KADK 680
Query: 619 VLFVGYGTVI 628
+L + G +I
Sbjct: 681 ILIMDNGKII 690
>emb|CAA08835.1| (AJ009799) ABC transporter protein [Gallus gallus]
Length = 1288
Score = 70.6 bits (170), Expect = 5e-11
Identities = 67/232 (28%), Positives = 106/232 (44%), Gaps = 34/232 (14%)
Query: 407 ESELDIKGLPQEIQDLLKAFGVRHRVIQRP---VLRNLNFTINPGEVVAVVGASGAGKTT 463
+S D P I+ L+ V RP +L+ LN +N G+ VA+VG SG GK+T
Sbjct: 384 DSYSDAGHKPDHIKGNLEFQNVFFNYPSRPDVEILKGLNLKVNCGQTVALVGGSGCGKST 443
Query: 464 LLRLILGAIKGYWEEKYRPTSGKIEVP----KNAKVSVL--IPGEIEPE----------- 506
++LI + Y P G I + K+ V L I G + E
Sbjct: 444 TVQLI--------QRFYDPKEGTITIDGQDLKSLNVRYLREIIGVVNQEPVLFATTIAEN 495
Query: 507 --FGSETI-LEHVYRKIRDLNAAVEVLNRAGLSDAVLYRAKFSELSTGQKERAKIASLLA 563
+G E + +E + R ++ NA ++ + V+ + +++S GQK+R IA L
Sbjct: 496 IRYGREDVTMEEIERATKEANAYDFIMKLPKKFETVV-GERGAQMSGGQKQRIAIARALV 554
Query: 564 ERPNVLLIDEFAAHLDTLTAMRVARKVSEIVREAGITAVIITHRPEVVKALD 615
P +LL+DE + LDT + V + + RE G T V++ HR V+ D
Sbjct: 555 HNPKILLLDEATSALDT-ESESVVQAALDKARE-GRTTVVVAHRLSTVRNAD 604
>emb|CAB37661.1| (AJ224479) cdd4-like protein [Bacillus sphaericus]
Length = 311
Score = 70.6 bits (170), Expect = 5e-11
Identities = 61/228 (26%), Positives = 102/228 (43%), Gaps = 29/228 (12%)
Query: 418 EIQDLLKAFGVRHRVIQRPVLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGYWE 477
+ Q+L K FG V N+N I GE+ +G +GAGKTT +R++LG +K
Sbjct: 14 QTQNLSKNFGKEQAV------SNINLQIRKGEIYGFLGPNGAGKTTTIRMLLGLMK---- 63
Query: 478 EKYRPTSGKIEVPKN--AKVSVLIPGEIEPEFGSETILEHV--YRKIRDLNAAV------ 527
P+SG I++ + K + I + + + H+ Y + L +
Sbjct: 64 ----PSSGTIKIFQKDIVKDRIQILANVGSLVENPSYYPHLTAYENLEALRKILGVPKTR 119
Query: 528 --EVLNRAGLSDAVLYRAKFSELSTGQKERAKIASLLAERPNVLLIDEFAAHLDTLTAMR 585
EVL L +A K S G K+R IA+ L P +L++DE LD +
Sbjct: 120 IDEVLQTVRLKEAA--NKKVKGFSLGMKQRLGIAAALLHNPELLILDEPTNGLDPSGIIE 177
Query: 586 VARKVSEIVREAGITAVIITHRPEVVKALDPDKVLFVGYGTVIVRKSL 633
+ + + +E G+T +I +H + + +V V GT+I + S+
Sbjct: 178 IRNLIKRLPKEYGMTIIISSHLLSEIDQM-ATQVGIVSKGTLIFQDSI 224
>dbj|BAA96370.1| (AB035331) ABC protein [Physarum polycephalum]
Length = 325
Score = 70.6 bits (170), Expect = 5e-11
Identities = 66/243 (27%), Positives = 112/243 (45%), Gaps = 39/243 (16%)
Query: 407 ESELDIKGLPQEIQDLLKAFGVRHRVIQRPVLRNLNFTINPGEVVAVVGASGAGKTTLLR 466
++ L KGL + +++ A+ R VI VL+ ++ PG+VVA+VG SG GK+T++
Sbjct: 72 DTPLQFKGLIR-YENVFFAYPSRPDVI---VLKGVDLECKPGQVVALVGPSGGGKSTMVA 127
Query: 467 LILGAIKGYWEEKYRPTSGKIEVPKNAKVSVLIPGEIEPEFG-------------SETIL 513
L+ E Y P SG + + + L P + + G S+ I
Sbjct: 128 LL--------EAFYYPVSGHLTI-DGVDIRDLDPEFLHDKVGLVSQEPTLFAASISDNIA 178
Query: 514 EHVYRKIRDLNAAVEVLNRAGLSDAV---------LYRAKFSELSTGQKERAKIASLLAE 564
+ K +++ +E A D + L + LS GQK+R IA + +
Sbjct: 179 YGIKGKKVSIDSIIEAAKHANAHDFITSLPQGYDTLVGERGVRLSGGQKQRVAIARAVLK 238
Query: 565 RPNVLLIDEFAAHLDTLTAMRVARKVSEIVREAGITAVIITHRPEVVKALDPDKVLFVGY 624
P +LL+DE + LD + V + + E+++ T ++I HR VK + KV+ V
Sbjct: 239 DPTILLLDEATSALDAESEYLVKKALDELMQHR--TTLVIAHRLSTVK--NAHKVVVVES 294
Query: 625 GTV 627
GT+
Sbjct: 295 GTI 297
>pir||DVHY1C multidrug resistance protein 1 - Chinese hamster
>gi|191155|gb|AAA37004.1| (M59253) p-glycoprotein
[Cricetulus sp.]
Length = 1276
Score = 70.2 bits (169), Expect = 6e-11
Identities = 67/264 (25%), Positives = 116/264 (43%), Gaps = 59/264 (22%)
Query: 389 KVEMLEGPIVFKNVTKVFESELDIKGLPQEIQDLLKAFGVRHRVIQRPVLRNLNFTINPG 448
K + ++G + FKN+ + S D++ +L+ LN + G
Sbjct: 381 KPDNIKGNLEFKNIHFSYPSRKDVQ-----------------------ILKGLNLKVQSG 417
Query: 449 EVVAVVGASGAGKTTLLRLILGAIKGYWEEKYRPTSGKIEVPK------NAKVSVLIPGE 502
+ VA+VG SG GK+T ++L+ + Y PT G + + N + I G
Sbjct: 418 QTVALVGNSGCGKSTTVQLL--------QRLYDPTEGVVSIDGQDIRTINVRYLREIIGV 469
Query: 503 IEPE-------------FGSETI-LEHVYRKIRDLNAAVEVLNRAGLSDAVLYRAKFSEL 548
+ E +G E + ++ + + +++ NA ++ D L + ++L
Sbjct: 470 VSQEPVLFATTIAENIRYGRENVTMDEIEKAVKEANAYDFIMKLPHKFDT-LVGERGAQL 528
Query: 549 STGQKERAKIASLLAERPNVLLIDEFAAHLDTLTAMRVARKVSEIVREAGITAVIITHRP 608
S GQK+R IA L P +LL+DE + LDT + V + + RE G T ++I HR
Sbjct: 529 SGGQKQRIAIARALVRNPKILLLDEATSALDT-ESEAVVQAALDKARE-GRTTIVIAHRL 586
Query: 609 EVVKALDPDKVLFVGY-GTVIVRK 631
V+ D + G+ G VIV +
Sbjct: 587 STVRNAD----IIAGFDGGVIVEQ 606
>sp|P21448|MDR1_CRIGR MULTIDRUG RESISTANCE PROTEIN 1 (P-GLYCOPROTEIN 1)
>gi|191165|gb|AAA68883.1| (M60040) p-glycoprotein
isoform I [Cricetulus griseus]
Length = 1276
Score = 70.2 bits (169), Expect = 6e-11
Identities = 67/264 (25%), Positives = 116/264 (43%), Gaps = 59/264 (22%)
Query: 389 KVEMLEGPIVFKNVTKVFESELDIKGLPQEIQDLLKAFGVRHRVIQRPVLRNLNFTINPG 448
K + ++G + FKN+ + S D++ +L+ LN + G
Sbjct: 381 KPDNIKGNLEFKNIHFSYPSRKDVQ-----------------------ILKGLNLKVQSG 417
Query: 449 EVVAVVGASGAGKTTLLRLILGAIKGYWEEKYRPTSGKIEVPK------NAKVSVLIPGE 502
+ VA+VG SG GK+T ++L+ + Y PT G + + N + I G
Sbjct: 418 QTVALVGNSGCGKSTTVQLL--------QRLYDPTEGVVSIDGQDIRTINVRYLREIIGV 469
Query: 503 IEPE-------------FGSETI-LEHVYRKIRDLNAAVEVLNRAGLSDAVLYRAKFSEL 548
+ E +G E + ++ + + +++ NA ++ D L + ++L
Sbjct: 470 VSQEPVLFATTIAENIRYGRENVTMDEIEKAVKEANAYDFIMKLPHKFDT-LVGERGAQL 528
Query: 549 STGQKERAKIASLLAERPNVLLIDEFAAHLDTLTAMRVARKVSEIVREAGITAVIITHRP 608
S GQK+R IA L P +LL+DE + LDT + V + + RE G T ++I HR
Sbjct: 529 SGGQKQRIAIARALVRNPKILLLDEATSALDT-ESEAVVQAALDKARE-GRTTIVIAHRL 586
Query: 609 EVVKALDPDKVLFVGY-GTVIVRK 631
V+ D + G+ G VIV +
Sbjct: 587 STVRNAD----IIAGFDGGVIVEQ 606
>gb|AAA37005.1| (M59254) p-glycoprotein [Cricetulus sp.]
Length = 1169
Score = 70.2 bits (169), Expect = 6e-11
Identities = 67/264 (25%), Positives = 116/264 (43%), Gaps = 59/264 (22%)
Query: 389 KVEMLEGPIVFKNVTKVFESELDIKGLPQEIQDLLKAFGVRHRVIQRPVLRNLNFTINPG 448
K + ++G + FKN+ + S D++ +L+ LN + G
Sbjct: 274 KPDNIKGNLEFKNIHFSYPSRKDVQ-----------------------ILKGLNLKVQSG 310
Query: 449 EVVAVVGASGAGKTTLLRLILGAIKGYWEEKYRPTSGKIEVPK------NAKVSVLIPGE 502
+ VA+VG SG GK+T ++L+ + Y PT G + + N + I G
Sbjct: 311 QTVALVGNSGCGKSTTVQLL--------QRLYDPTEGVVSIDGQDIRTINVRYLREIIGV 362
Query: 503 IEPE-------------FGSETI-LEHVYRKIRDLNAAVEVLNRAGLSDAVLYRAKFSEL 548
+ E +G E + ++ + + +++ NA ++ D L + ++L
Sbjct: 363 VSQEPVLFATTIAENIRYGRENVTMDEIEKAVKEANAYDFIMKLPHKFDT-LVGERGAQL 421
Query: 549 STGQKERAKIASLLAERPNVLLIDEFAAHLDTLTAMRVARKVSEIVREAGITAVIITHRP 608
S GQK+R IA L P +LL+DE + LDT + V + + RE G T ++I HR
Sbjct: 422 SGGQKQRIAIARALVRNPKILLLDEATSALDT-ESEAVVQAALDKARE-GRTTIVIAHRL 479
Query: 609 EVVKALDPDKVLFVGY-GTVIVRK 631
V+ D + G+ G VIV +
Sbjct: 480 STVRNAD----IIAGFDGGVIVEQ 499
>sp|P75790|YBIT_ECOLI HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PROTEIN YBIT
>gi|7445681|pir||D64819 probable ABC-type transport
protein ybiT - Escherichia coli
>gi|1787041|gb|AAC73907.1| (AE000184) putative
ATP-binding component of a transport system [Escherichia
coli K12] >gi|4062387|dbj|BAA35501.1| (D90719)
Hypothetical protein HI0658 [Escherichia coli]
>gi|4062394|dbj|BAA35508.1| (D90720) Hypothetical
protein HI0658 [Escherichia coli]
Length = 530
Score = 70.2 bits (169), Expect = 6e-11
Identities = 62/232 (26%), Positives = 112/232 (47%), Gaps = 34/232 (14%)
Query: 389 KVEMLEGPIV-FKNVTKVFESELDIKGLPQEIQDLLKAFGVRHRVIQRPVLRNLNFTINP 447
K + P + F+ K+F + L+++GL + + P+ +NLN +
Sbjct: 298 KASSRQNPFIRFEQDKKLFRNALEVEGLTKGFDN-------------GPLFKNLNLLLEV 344
Query: 448 GEVVAVVGASGAGKTTLLRLILGAIKGYWEEKYRPTSGKIEVPKNAKVSVLIPGEIEPEF 507
GE +AV+G +G GK+TLL+ ++G + +P SG ++ +NA++ + E EF
Sbjct: 345 GEKLAVLGTNGVGKSTLLKTLVGDL--------QPDSGTVKWSENARIGYYAQ-DHEYEF 395
Query: 508 GSE-TILEHV---YRKIRDLNAAVEVLNRAGLS-DAVLYRAKFSELSTGQKERAKIASLL 562
++ T+ E + ++ D A +L R S D + AK LS G+K R L+
Sbjct: 396 ENDLTVFEWMSQWKQEGDDEQAVRSILGRLLFSQDDIKKPAKV--LSGGEKGRMLFGKLM 453
Query: 563 AERPNVLLIDEFAAHLDTLTAMRVARKVSEIVREAGITAVIITHRPEVVKAL 614
++PN+L++DE HLD M ++ + T + ++H E V +L
Sbjct: 454 MQKPNILIMDEPTNHLD----MESIESLNMALELYQGTLIFVSHDREFVSSL 501
>gi|11497838 branched-chain amino acid ABC transporter, ATP-binding protein
(braF-1) [Archaeoglobus fulgidus]
>gi|7445740|pir||F69277 branched-chain amino acid ABC
transporter, ATP-binding protein (braF-1) homolog -
Archaeoglobus fulgidus >gi|2650419|gb|AAB91010.1|
(AE001090) branched-chain amino acid ABC transporter,
ATP-binding protein (braF-1) [Archaeoglobus fulgidus]
Length = 281
Score = 70.2 bits (169), Expect = 6e-11
Identities = 66/237 (27%), Positives = 113/237 (46%), Gaps = 18/237 (7%)
Query: 405 VFESELDIKGLPQEIQDLLKAFGVRHRVIQRPVLRNLNFTINPGEVVAVVGASGAGKTTL 464
V+ S+ L + ++ +LK V R + VL +N I+ E V ++G +GAGKTTL
Sbjct: 38 VWISKAKYLNLAETVKSMLKVRNVHKRFGECSVLEGVNLEIDKSERVGIIGPNGAGKTTL 97
Query: 465 LRLILGAIK---GYWEEKYRPTSGKIEVPKNAKVSVLIPGEIEPEFGSETILEHVYRKIR 521
+I G +K G + R +G ++ + AK+ ++ +I F + T+ +++
Sbjct: 98 FNIITGFLKPDRGEIRFRSRDITG-LKPNQLAKMGIVRTFQIVKVFSNMTVEQNMLTVSD 156
Query: 522 DLNAAVEVLNRAGLSDAVLYRAKFSELSTGQKERAKIASLLAERPNVLLIDEFAAHLDTL 581
DL + L GL + A + LS G+ + IA LA P +LL+DE + L
Sbjct: 157 DL----DYLREFGLWEKRHELA--ANLSYGELRKLSIALALAPNPKLLLLDEPFSGLSPK 210
Query: 582 TAMRVARKVSEIVREAGITAVIITHR-------PEVVKALDPDKVLFVGYGTVIVRK 631
A +A + E + G + II HR E V L+ +++F G+ +VR+
Sbjct: 211 EARDLA-GIIESINHNGQSIAIIEHRLKDLFNVAERVVVLNSGRIIFEGHPEEVVRE 266
>pir||B71676 probable ABC transporter msbA2 - Rickettsia prowazekii
>gi|3861232|emb|CAA15132.1| (AJ235272) PROBABLE
TRANSPORT ATP-BINDING PROTEIN MSBA (msbA2) [Rickettsia
prowazekii]
Length = 576
Score = 70.2 bits (169), Expect = 6e-11
Identities = 61/216 (28%), Positives = 104/216 (47%), Gaps = 33/216 (15%)
Query: 437 VLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGYWEEKYRPTSGKIEVPKNAKVS 496
V+ N++ IN + V +VG SGAGK+TL++L+L YR +G I + N +S
Sbjct: 353 VINNMSLKINSNKFVGIVGRSGAGKSTLIQLLL--------RFYRQENGTILI-NNQDIS 403
Query: 497 VLIPGEI---------EPEFGSETILEHVY---RKIRD--LNAAVEVLN----RAGLSDA 538
+ P +I E S+TI ++ K D +N +++ L D
Sbjct: 404 FVKPTDIRKFIAYVPQEASIFSDTIKSNIIFGNNKASDYEINEIIKITGIEEFSTKLHDG 463
Query: 539 VLYRA--KFSELSTGQKERAKIASLLAERPNVLLIDEFAAHLDTLTAMRVARKVSEIVRE 596
+ + K LS GQK+R IA L +P +LL+DE + LDT++ ++ + +I++
Sbjct: 464 INTKIGEKGVRLSGGQKQRIAIARALLRKPKILLLDEAMSALDTMSEQKLLNAIKKIMK- 522
Query: 597 AGITAVIITHRPEVVKALDPDKVLFVGYGTVIVRKS 632
G + I HR +++ D +L + G V+ S
Sbjct: 523 -GNIIISIAHRISSIES--ADYILVIDKGGVVTEGS 555
>pir||T21266 hypothetical protein F22E10.1 - Caenorhabditis elegans
>gi|3876291|emb|CAA91799.1| (Z67882) contains similarity
to Pfam domain: PF00005 (ABC transporter), Score=427.5,
E-value=3.8e-125, N=2; PF00664 (ABC transporter
transmembrane region.), Score=255.6, E-value=2.1e-73,
N=2~cDNA EST yk10e8.3 comes from this gene~cDNA EST
yk10e8.5 come>
Length = 1318
Score = 70.2 bits (169), Expect = 6e-11
Identities = 70/268 (26%), Positives = 130/268 (48%), Gaps = 41/268 (15%)
Query: 385 PSYGKVEMLEGPIVFKNVTKVFESELDIKGLPQEIQDLLKAFGVRHRVIQRP---VLRNL 441
P + K + G ++FK + + ++ ++G EI+ + V+ QRP V+ +L
Sbjct: 1040 PEFVKAKTAAG-MLFKLIYRKSKTGDVMEGNNTEIRGNVLFESVKFSYPQRPMQPVMTDL 1098
Query: 442 NFTINPGEVVAVVGASGAGKTTLLRLILGAIKGYWEEKYRPTSGKIEVP---------KN 492
+F+ + G+ VA+VG SG GK+T + ++ E Y + G + + +
Sbjct: 1099 HFSAHSGQTVALVGPSGTGKSTCIAML--------ERFYDVSGGALRIDGQNIKSLSLHH 1150
Query: 493 AKVSVLIPGEIEPEFGSETILEHVYRKIRDLNA-----AVEVLNR--------AGLSDAV 539
+ + + G+ EP + TI E+V ++D++ A+E+ N AG+ V
Sbjct: 1151 LRTQMALVGQ-EPRLFAGTIKENVCFGLKDVSVEKVHQALELANASRFLANLPAGIDTEV 1209
Query: 540 LYRAKFSELSTGQKERAKIASLLAERPNVLLIDEFAAHLDTLTAMRVARKVSEIVREAGI 599
K +LS GQK+R IA L P +LL+DE + LD+ + R ++ + RE G
Sbjct: 1210 --GEKGGQLSGGQKQRIAIARALVRDPKILLLDEATSALDS-ESERAVQEALDRARE-GR 1265
Query: 600 TAVIITHRPEVVKALDPDKVLFVGYGTV 627
T + I HR ++ + D ++++ +G V
Sbjct: 1266 TCITIAHRLSSIQ--NSDLIVYIDHGMV 1291
>pir||E75302 ABC transporter, ATP-binding protein - Deinococcus radiodurans
(strain R1) >gi|6460001|gb|AAF11747.1|AE002053_2
(AE002053) ABC transporter, ATP-binding protein
[Deinococcus radiodurans]
Length = 248
Score = 70.2 bits (169), Expect = 6e-11
Identities = 64/200 (32%), Positives = 95/200 (47%), Gaps = 28/200 (14%)
Query: 441 LNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGYWEEKYRPTSGKIEV---PKNAKVSV 497
LN + PGE + VVG SG+GK+TLL L+ G + RP G+I + P N
Sbjct: 43 LNLHVEPGEFLCVVGPSGSGKSTLLSLLAGFL--------RPQQGEIRLGGDPVNGPHPA 94
Query: 498 LIPGEIEPE-FGSETILEHVYRKIRDLNAA------VEVLNRAGLSDAVLYRAKFSELST 550
L + E F T+ +V ++ ++ A + L GLS R ELS
Sbjct: 95 LTLVQQEAALFPWLTVGGNVAFGLKGVSGAEKAARVADALRLVGLSGYEARRPH--ELSG 152
Query: 551 GQKERAKIASLLAERPNVLLIDEFAAHLDTLTAMRVARKVSEIVREAGITAVIITHRPEV 610
GQ++R IA LA RP +LL+DE + LD T +A ++ I + +T V +TH+
Sbjct: 153 GQRQRVSIARALAVRPGLLLLDEPFSALDHATRTTLADELLAIWWQQKVTVVFVTHQ--- 209
Query: 611 VKALDPDKVLFVGYGTVIVR 630
D+ L +G V +R
Sbjct: 210 -----LDEALHLGQRVVALR 224
>emb|CAA57938.1| (X82612) ATM1 [Saccharomyces cerevisiae]
Length = 694
Score = 69.9 bits (168), Expect = 8e-11
Identities = 68/254 (26%), Positives = 118/254 (45%), Gaps = 43/254 (16%)
Query: 400 KNVTKVFESELDI---KGLPQEIQDLLKAFGVRHRVIQRPVLRNLNFTINPGEVVAVVGA 456
KN K+ +E + + +P +I FG R +L+N +FTI G A+VG+
Sbjct: 418 KNEVKIKNAERPLMLPENVPYDITFENVTFGYHP---DRKILKNASFTIPAGWKTAIVGS 474
Query: 457 SGAGKTTLLRLILGAIKGYWEEKYRPTSGKI----------EVPKNAKVSVLIPGEIEPE 506
SG+GK+T+L+L+ Y P SG+I ++ KV ++P + P
Sbjct: 475 SGSGKSTILKLVF--------RFYDPESGRILINGRDIKEYDIDALRKVIGVVPQD-TPL 525
Query: 507 FGSETILEHVYRKIRDLNA----AVEVLNRAGLSDAV---------LYRAKFSELSTGQK 553
F ++TI E+V K ++A + V+ +A L+ + + + +S G+K
Sbjct: 526 F-NDTIWENV--KFGRIDATDEEVITVVEKAQLAPLIKKLPQGFDTIVGERGLMISGGEK 582
Query: 554 ERAKIASLLAERPNVLLIDEFAAHLDTLTAMRVARKVSEIVREAGITAVIITHRPEVVKA 613
+R IA +L + ++ DE + LDT T + R + + T+V I HR +
Sbjct: 583 QRLAIARVLLKNARIMFFDEATSALDTHTEQALLRTIRDNFTSGSRTSVYIAHRLRTI-- 640
Query: 614 LDPDKVLFVGYGTV 627
D DK++ + G V
Sbjct: 641 ADADKIIVLDNGRV 654
>gi|6323959 mitochondrial ABC transporter protein; Atm1p [Saccharomyces
cerevisiae] >gi|1352002|sp|P40416|ATM1_YEAST
MITOCHONDRIAL TRANSPORTER ATM1 PRECURSOR
>gi|1078103|pir||S54211 ATM1 protein precursor - yeast
(Saccharomyces cerevisiae) >gi|793877|emb|CAA57359.1|
(X81715) MDYp [Saccharomyces cerevisiae]
>gi|798943|emb|CAA89134.1| (Z49212) Atm1p [Saccharomyces
cerevisiae]
Length = 690
Score = 69.9 bits (168), Expect = 8e-11
Identities = 68/254 (26%), Positives = 118/254 (45%), Gaps = 43/254 (16%)
Query: 400 KNVTKVFESELDI---KGLPQEIQDLLKAFGVRHRVIQRPVLRNLNFTINPGEVVAVVGA 456
KN K+ +E + + +P +I FG R +L+N +FTI G A+VG+
Sbjct: 414 KNEVKIKNAERPLMLPENVPYDITFENVTFGYHP---DRKILKNASFTIPAGWKTAIVGS 470
Query: 457 SGAGKTTLLRLILGAIKGYWEEKYRPTSGKI----------EVPKNAKVSVLIPGEIEPE 506
SG+GK+T+L+L+ Y P SG+I ++ KV ++P + P
Sbjct: 471 SGSGKSTILKLVF--------RFYDPESGRILINGRDIKEYDIDALRKVIGVVPQD-TPL 521
Query: 507 FGSETILEHVYRKIRDLNA----AVEVLNRAGLSDAV---------LYRAKFSELSTGQK 553
F ++TI E+V K ++A + V+ +A L+ + + + +S G+K
Sbjct: 522 F-NDTIWENV--KFGRIDATDEEVITVVEKAQLAPLIKKLPQGFDTIVGERGLMISGGEK 578
Query: 554 ERAKIASLLAERPNVLLIDEFAAHLDTLTAMRVARKVSEIVREAGITAVIITHRPEVVKA 613
+R IA +L + ++ DE + LDT T + R + + T+V I HR +
Sbjct: 579 QRLAIARVLLKNARIMFFDEATSALDTHTEQALLRTIRDNFTSGSRTSVYIAHRLRTI-- 636
Query: 614 LDPDKVLFVGYGTV 627
D DK++ + G V
Sbjct: 637 ADADKIIVLDNGRV 650
>gb|AAB63643.1| (AC001645) ABC transporter (PDR5-like) isolog [Arabidopsis thaliana]
>gi|9279716|dbj|BAB01273.1| (AB023046) ABC transporter
[Arabidopsis thaliana]
Length = 1416
Score = 69.9 bits (168), Expect = 8e-11
Identities = 65/229 (28%), Positives = 103/229 (44%), Gaps = 27/229 (11%)
Query: 399 FKNVTKVFESELDIKGLPQEIQDLLKAFGVRHRVIQRPVLRNLNFTINPGEVVAVVGASG 458
F +T F++ +P+E +K GV +Q +L+ + PG + A++G SG
Sbjct: 809 FTPLTMSFDNVNYYVDMPKE----MKEQGVSKDKLQ--LLKEVTGVFRPGVLTALMGVSG 862
Query: 459 AGKTTLLRLILGAIKGYWEEKYRPTSGKIEVPKNAKVSVLIPGEIEPE---FGSETILEH 515
AGKTTL+ ++ G G + E SG PK + I G E T+ E
Sbjct: 863 AGKTTLMDVLAGRKTGGYIEGDIRISG---FPKRQETFARISGYCEQNDIHSPQVTVKES 919
Query: 516 V--------------YRKIRDLNAAVEVLNRAGLSDAVLYRAKFSELSTGQKERAKIASL 561
+ Y K+R ++ +E++ L DAV+ + LST Q++R IA
Sbjct: 920 LIYSAFLRLPKEVTKYEKMRFVDEVMELVELESLKDAVVGLPGITGLSTEQRKRLTIAVE 979
Query: 562 LAERPNVLLIDEFAAHLDTLTAMRVARKVSEIVREAGITAVIITHRPEV 610
L P+++ +DE + LD A V R V V + G T V H+P +
Sbjct: 980 LVANPSIIFMDEPTSGLDARAAAIVMRTVRNTV-DTGRTVVCTIHQPSI 1027
>gb|AAC98048.1| (AC005896) putative ABC transporter [Arabidopsis thaliana]
Length = 1413
Score = 69.9 bits (168), Expect = 8e-11
Identities = 81/304 (26%), Positives = 129/304 (41%), Gaps = 51/304 (16%)
Query: 333 YNPFFEKVGFKFVWETASGRPVLIYPLTQEAKEYLERYFKEDPYAPKEPLWKPSYGKVEM 392
+N F + F+ S RP++ E + + K++ KP ++
Sbjct: 748 FNTIFT-LALSFLKSPTSSRPMISQDKLSELQGTKDSSVKKN---------KPLDSSIKT 797
Query: 393 LEGP----IVFKNVTKVFESELDIKGLPQEIQDLLKAFGVRHRVIQRPVLRNLNFTINPG 448
E P + FK +T F+ +P E +K G + +Q +L + PG
Sbjct: 798 NEDPGKMILPFKPLTITFQDLNYYVDVPVE----MKGQGYNEKKLQ--LLSEITGAFRPG 851
Query: 449 EVVAVVGASGAGKTTLLRLILGA-IKGYWEEKYRPTSGKIEVPKN-AKVS-------VLI 499
+ A++G SGAGKTTLL ++ G GY E + R SG ++V + A+VS +
Sbjct: 852 VLTALMGISGAGKTTLLDVLAGRKTSGYIEGEIR-ISGFLKVQETFARVSGYCEQTDIHS 910
Query: 500 PG-------------EIEPEFGSETILEHVYRKIRDLNAAVEVLNRAGLSDAVLYRAKFS 546
P + PE +T KIR + +E + + DA++ A S
Sbjct: 911 PSITVEESLIYSAWLRLVPEINPQT-------KIRFVKQVLETIELEEIKDALVGVAGVS 963
Query: 547 ELSTGQKERAKIASLLAERPNVLLIDEFAAHLDTLTAMRVARKVSEIVREAGITAVIITH 606
LST Q++R +A L P+++ +DE LD A V R V V E G T V H
Sbjct: 964 GLSTEQRKRLTVAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKN-VAETGRTIVCTIH 1022
Query: 607 RPEV 610
+P +
Sbjct: 1023 QPSI 1026
>pir||G72598 probable ABC transporter ATP-binding protein APE1255 - Aeropyrum
pernix (strain K1) >gi|5104931|dbj|BAA80245.1|
(AP000061) 253aa long hypothetical ABC transporter
ATP-binding protein [Aeropyrum pernix]
Length = 253
Score = 69.9 bits (168), Expect = 8e-11
Identities = 61/215 (28%), Positives = 105/215 (48%), Gaps = 24/215 (11%)
Query: 414 GLPQEIQDLLKAFGVRHRVIQRPVLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIK 473
GL Q ++A GV R+ R VL++++ T+ G V VVG +GAGKTTL R +LG
Sbjct: 4 GLGGAGQPAVEAEGVWKRLGGRWVLKDVSLTVPRGSVYGVVGPNGAGKTTLFRTLLGL-- 61
Query: 474 GYWEEKYRPTSGKI----EVPKNAKVSVLIPGEIEPEFGS--ETILEHVYRK-------I 520
YR G++ E + A S+ PE G + H + + +
Sbjct: 62 ------YRADRGRVALLGEPVERAGGSLFRRVAYLPEDGEPYRNMTGHEFLRLYASIYGV 115
Query: 521 RDLNAAVEVLNR-AGLSDAVLYRAKFSELSTGQKERAKIASLLAERPNVLLIDEFAAHLD 579
DL +E +R +GL + R + S G + R +A++LA +P++ ++DE A LD
Sbjct: 116 EDLEGYLEEASRLSGLGGRLGERVR--SYSKGMRRRLLVAAMLALKPSLAVLDEPTAGLD 173
Query: 580 TLTAMRVARKVSEIVREAGITAVIITHRPEVVKAL 614
+ ++ + R + E G+T ++ +H V+++
Sbjct: 174 PVYSVGIRRLLKEYSERHGVTVLLSSHNMYEVESV 208
>gb|AAD47141.1|AF078777_1 (AF078777) ABC transporter [Homo sapiens]
Length = 748
Score = 69.9 bits (168), Expect = 8e-11
Identities = 62/216 (28%), Positives = 107/216 (48%), Gaps = 37/216 (17%)
Query: 437 VLRNLNFTINPGEVVAVVGASGAGKTTLLRLILGAIKGYWEEKYRPTSGKI-----EVPK 491
VL ++F + G+ VA+VG SG+GK+T++RL+ Y P G I +
Sbjct: 483 VLSGISFEVPAGKKVAIVGGSGSGKSTIVRLLF--------RFYEPQKGSIYLAGQNIQD 534
Query: 492 NAKVSVLIPGEIEPEFGSETILEH--VYRKI--RDLNAAVE----VLNRAGLSDAVL--- 540
+ VS+ + P+ + +L H +Y + +++A+ E V AGL DA+L
Sbjct: 535 VSLVSLRRAVGVVPQ---DAVLFHNTIYYNLLYGNISASPEEVYAVAKLAGLHDAILRMP 591
Query: 541 --YRAKFSE----LSTGQKERAKIASLLAERPNVLLIDEFAAHLDTLTAMRVARKVSEIV 594
Y + E LS G+K+R IA + + P V+L DE + LD++T + + ++V
Sbjct: 592 HGYDTQVGERGLKLSGGEKQRVAIARAILKDPPVILYDEATSSLDSITEETILGAMKDVV 651
Query: 595 REAGITAVIITHRPEVVKALDPDKVLFVGYGTVIVR 630
+ T++ I HR V +D D+++ + G V R
Sbjct: 652 KHR--TSIFIAHRLSTV--VDADEIIVLDQGKVAER 683
>pir||D83419 probable ATP-binding component of ABC transporter PA1807 [imported]
- Pseudomonas aeruginosa (strain PAO1)
>gi|9947791|gb|AAG05196.1|AE004607_2 (AE004607) probable
ATP-binding component of ABC transporter [Pseudomonas
aeruginosa]
Length = 536
Score = 69.9 bits (168), Expect = 8e-11
Identities = 65/233 (27%), Positives = 108/233 (45%), Gaps = 21/233 (9%)
Query: 419 IQDLLKAFGVRHRVIQRPV-----LRNLNFTINPGEVVAVVGASGAGKTTL----LRLI- 468
+ DL F +R V +R V + +NF + G+ + +VG SG+GK+TL LRL+
Sbjct: 277 VDDLRVWFPIRKGVFRRTVDHVKAVDGVNFELPRGQTLGIVGESGSGKSTLGLAILRLLE 336
Query: 469 -LGAIK-------GYWEEKYRPTSGKIEVPKNAKVSVLIPGEIEPEFGSETILEH-VYRK 519
G I+ G + RP +++V L P E E + H + +
Sbjct: 337 SQGGIRFEGTRLDGLAQHDVRPLRREMQVVFQDPYGSLSPRMCVGEIVGEGLRIHRIGSE 396
Query: 520 IRDLNAAVEVLNRAGLSDAVLYRAKFSELSTGQKERAKIASLLAERPNVLLIDEFAAHLD 579
A ++ L GL YR E S GQ++R IA L +P ++L+DE + LD
Sbjct: 397 AEQEQAIIDALVEVGLDPQTRYRYPH-EFSGGQRQRIAIARALVLKPALILLDEPTSALD 455
Query: 580 TLTAMRVARKVSEIVREAGITAVIITHRPEVVKALDPDKVLFVGYGTVIVRKS 632
+V + ++ + +T + I+H VVKAL +++ V +G V+ + S
Sbjct: 456 RTVQRQVVELLRQLQGKYNLTYLFISHDLAVVKALS-HQLMVVRHGKVVEQGS 507
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.319 0.138 0.405
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 236841823
Number of Sequences: 2977
Number of extensions: 10347079
Number of successful extensions: 42123
Number of sequences better than 1.0e-10: 287
Number of HSP's better than 0.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 284
Number of HSP's that attempted gapping in prelim test: 41660
Number of HSP's gapped (non-prelim): 434
length of query: 633
length of database: 189,106,746
effective HSP length: 57
effective length of query: 576
effective length of database: 154,992,987
effective search space: 89275960512
effective search space used: 89275960512
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 168 (69.9 bits)