BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB1933 (PAB1933) DE:STOMATIN-LIKE PROTEIN
(268 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||B75107 stomatin-like protein PAB1933 - Pyrococcus abyssi (s... 509 e-143
sp|O59180|YF11_PYRHO HYPOTHETICAL PROTEIN PH1511 >gi|7447604|pir... 483 e-136
gi|11499015 membrane protein [Archaeoglobus fulgidus] >gi|664798... 314 5e-85
pir||F70378 erythrocyte band 7 homolog - Aquifex aeolicus >gi|29... 296 2e-79
pir||D72522 probable erythrocyte band 7 integral membrane protei... 273 1e-72
pir||A83590 probable stomatin-like protein PA0452 [imported] - P... 263 2e-69
pir||G69104 stomatin-like protein - Methanobacterium thermoautot... 250 1e-65
gb|AAF48928.1| (AE003511) CG7635 gene product [Drosophila melano... 245 3e-64
gb|AAC64873.1| (AF034831) stomatin like protein [Rhizobium etli] 242 3e-63
pir||T34691 hypothetical protein SC1B5.13c SC1B5.13c - Streptomy... 240 2e-62
emb|CAA73876.1| (Y13473) stomatin [Danio rerio] 236 1e-61
gb|AAA58432.1| (M81635) stomatin peptide [Homo sapiens] 236 3e-61
gi|4758276 erythrocyte membrane protein band 7.2 (stomatin) [Hom... 236 3e-61
gb|AAC50296.1| (U33931) band 7.2b stomatin [Homo sapiens] >gi|15... 236 3e-61
sp|Q27433|MEC2_CAEEL MECHANOSENSORY PROTEIN 2 >gi|2133486|pir||S... 235 3e-61
gb|AAK42367.1| Erythrocyte band 7 membrane protein homolog [Sulf... 234 1e-60
gb|AAC64173.1| (AF093620) stomatin [Mus musculus] 231 5e-60
gi|7710018 erythrocyte protein band 7.2; protein 7.2b [Mus muscu... 231 5e-60
sp|P54116|BAN7_MOUSE ERYTHROCYTE BAND 7 INTEGRAL MEMBRANE PROTEI... 231 5e-60
pir||JC5221 stomatin - mouse >gi|975689|emb|CAA62503.1| (X91043)... 231 5e-60
pir||T27365 hypothetical protein Y71H9A.2 - Caenorhabditis elega... 228 7e-59
emb|CAB76415.1| (Z66565) contains similarity to Pfam domain: PF0... 228 7e-59
emb|CAC12423.1| (AL445067) membrane protein 7, erythrocyte (huma... 227 1e-58
gb|AAF48927.1| (AE003511) CG7633 gene product [Drosophila melano... 225 5e-58
sp|Q19200|STO1_CAEEL STO-1 PROTEIN >gi|7447613|pir||T15971 hypot... 217 8e-56
sp|Q21190|UNC1_CAEEL UNC-1 PROTEIN >gi|7494583|pir||T34324 eryth... 217 8e-56
sp|Q19958|STO2_CAEEL STO-2 PROTEIN >gi|7500297|pir||T16240 hypot... 216 2e-55
sp|Q22165|STO4_CAEEL STO-4 PROTEIN 206 2e-52
gb|AAF54744.1| (AE003694) CG17424 gene product [Drosophila melan... 205 5e-52
gb|AAB18857.1| (U50999) stomatin [Mus musculus] 194 9e-49
pir||E72322 conserved hypothetical protein - Thermotoga maritima... 193 2e-48
pir||A71159 probable membrane protein - Pyrococcus horikoshii >g... 193 2e-48
sp|Q20657|STO3_CAEEL STO-3 PROTEIN >gi|7503947|pir||T22502 hypot... 192 3e-48
pir||F75003 stomatin-like protein PAB1324 - Pyrococcus abyssi (s... 191 8e-48
gi|7657615 podocin [Homo sapiens] >gi|7363002|emb|CAB83216.1| (A... 188 7e-47
gb|AAF54746.1| (AE003694) CG14736 gene product [Drosophila melan... 184 8e-46
sp|Q58237|Y827_METJA HYPOTHETICAL PROTEIN MJ0827 >gi|2129105|pir... 180 1e-44
gb|AAF52157.1| (AE003607) CG14644 gene product [Drosophila melan... 180 1e-44
sp|O26788|Y692_METTH HYPOTHETICAL PROTEIN MTH692 >gi|7447611|pir... 165 4e-40
gb|AAG18899.1| (AE004992) bifunctional short chain isoprenyl dip... 158 7e-38
gi|10955528 77 pct identical to sp:YBBK_ECOLI[hypothetical 33kd ... 157 9e-38
pir||D75311 conserved hypothetical protein - Deinococcus radiodu... 157 1e-37
pir||F82256 conserved hypothetical protein VC0976 [imported] - V... 155 6e-37
sp|P71768|YE88_MYCTU HYPOTHETICAL 41.2 KDA PROTEIN RV1488 >gi|74... 154 1e-36
sp|P77367|YBBK_ECOLI HYPOTHETICAL 33.7 KD PROTEIN IN USHA-TESA I... 152 4e-36
gb|AAF09169.1|AF065260_1 (AF065260) HflC homolog [Clostridium di... 151 7e-36
emb|CAB94650.1| (AL359215) putative secreted protein. [Streptomy... 149 3e-35
pir||A82838 conserved hypothetical protein XF0185 [imported] - X... 149 3e-35
gb|AAC46209.1| (AF002133) MAV266 [Mycobacterium avium] 147 1e-34
pir||T36857 conserved hypothetical protein SCI5.04c - Streptomyc... 143 2e-33
gb|AAF44771.1|AF235154_1 (AF235154) GNA1220 [Neisseria gonorrhoe... 141 1e-32
pir||F81107 stomatin/Mec-2 family protein NMB1220 [imported] - N... 140 1e-32
gb|AAF42660.1|AF226511_1 (AF226511) membrane protein GNA1220 [Ne... 140 1e-32
pir||H81907 probable periplasmic protein NMA1382 [imported] - Ne... 140 1e-32
gb|AAF42668.1|AF226519_1 (AF226519) membrane protein GNA1220 [Ne... 140 1e-32
gb|AAF42663.1|AF226514_1 (AF226514) membrane protein GNA1220 [Ne... 139 2e-32
gb|AAF42676.1|AF226528_1 (AF226528) membrane protein GNA1220 [Ne... 139 2e-32
gb|AAF42675.1|AF226527_1 (AF226527) membrane protein GNA1220 [Ne... 139 4e-32
gb|AAF47921.1| (AE003481) CG7468 gene product [Drosophila melano... 137 1e-31
gb|AAF68388.1|AF236372_1 (AF236372) stomatin-like protein [Zea m... 137 2e-31
sp|P72655|YB28_SYNY3 HYPOTHETICAL 35.7 KD PROTEIN SLR1128 >gi|74... 135 4e-31
pir||T39599 conserved hypothetical protein SPBC16G5.07c - fissio... 133 2e-30
pir||T21562 hypothetical protein F30A10.5 - Caenorhabditis elega... 130 2e-29
pir||T05863 hypothetical protein T29A15.70 - Arabidopsis thalian... 130 2e-29
pir||T18493 hypothetical protein C0800w - malaria parasite (Plas... 129 3e-29
gi|7305503 stomatin-like protein 2 [Homo sapiens] >gi|6456118|gb... 129 3e-29
gi|11429564 stomatin-like protein 2 [Homo sapiens] 129 3e-29
dbj|BAA97132.1| (AB018115) contains similarity to stomatin like ... 129 4e-29
gb|AAF47110.1| (AE003462) CG2970 gene product [Drosophila melano... 128 8e-29
gb|AAF29073.1|AF161458_1 (AF161458) HSPC108 [Homo sapiens] 127 1e-28
pir||B71689 hypothetical protein RP328 - Rickettsia prowazekii >... 126 3e-28
gi|11426631 podocin [Homo sapiens] 124 1e-27
pir||T02246 hypothetical protein P1.11659_4 - human >gi|2984585|... 119 3e-26
gb|AAF14646.1|AF163772_6 (AF163772) 7138.6 [Leishmania major] 105 6e-22
pir||I39620 hypothetical protein X - Anabaena variabilis (fragme... 101 9e-21
gi|4759148 stomatin-like protein 1 [Homo sapiens] >gi|4160546|em... 99 6e-20
emb|CAB52016.1| (AL109665) SLP-1 [Homo sapiens] 99 6e-20
gb|AAF06960.1| (AF156557) stomatin related protein [Homo sapiens... 99 6e-20
gi|11432457 stomatin-like protein 1 [Homo sapiens] 99 6e-20
pir||B83072 conserved hypothetical protein PA4582 [imported] - P... 90 3e-17
gb|AAD42031.1|AF074953_1 (AF074953) stomatin-like protein UNC24 ... 86 5e-16
pir||B72207 ftsH proteinase activity modulator HflC - Thermotoga... 85 1e-15
pir||A83028 proteinase subunit HflC PA4941 [imported] - Pseudomo... 82 9e-15
pir||T32977 unc-24 protein - Caenorhabditis elegans >gi|1353669|... 78 1e-13
pir||A71722 hflC protein (hflC) RP123 - Rickettsia prowazekii >g... 78 1e-13
sp|O32076|YUAG_BACSU HYPOTHETICAL 56.0 KD PROTEIN IN GLGB-GBSB I... 73 4e-12
pir||B83028 proteinase subunit HflK PA4942 [imported] - Pseudomo... 69 4e-11
>pir||B75107 stomatin-like protein PAB1933 - Pyrococcus abyssi (strain Orsay)
>gi|5458082|emb|CAB49571.1| (AJ248285) STOMATIN-LIKE
PROTEIN [Pyrococcus abyssi]
Length = 268
Score = 509 bits (1297), Expect = e-143
Identities = 268/268 (100%), Positives = 268/268 (100%)
Query: 1 MILPTNFFVTTIILLFILIFLASAIKIVKEYERAVIFRLGRVVGARGPGLFFIIPIFEKA 60
MILPTNFFVTTIILLFILIFLASAIKIVKEYERAVIFRLGRVVGARGPGLFFIIPIFEKA
Sbjct: 1 MILPTNFFVTTIILLFILIFLASAIKIVKEYERAVIFRLGRVVGARGPGLFFIIPIFEKA 60
Query: 61 VIVDLRTQVLDVPVQETITKDNVPVRVNAVVYFRVVDPVKAVTQVKNYIMATSQISQTTL 120
VIVDLRTQVLDVPVQETITKDNVPVRVNAVVYFRVVDPVKAVTQVKNYIMATSQISQTTL
Sbjct: 61 VIVDLRTQVLDVPVQETITKDNVPVRVNAVVYFRVVDPVKAVTQVKNYIMATSQISQTTL 120
Query: 121 RSVIGQAHLDELLSERDKLNMQLQRIIDEATDPWGIKVTAVEIKDVELPAGMQRAMAKQA 180
RSVIGQAHLDELLSERDKLNMQLQRIIDEATDPWGIKVTAVEIKDVELPAGMQRAMAKQA
Sbjct: 121 RSVIGQAHLDELLSERDKLNMQLQRIIDEATDPWGIKVTAVEIKDVELPAGMQRAMAKQA 180
Query: 181 EAERERRARITLAEAERQAAEKLREAAEIISEHPMALQLRTLQTISDVASDKSNVIVLML 240
EAERERRARITLAEAERQAAEKLREAAEIISEHPMALQLRTLQTISDVASDKSNVIVLML
Sbjct: 181 EAERERRARITLAEAERQAAEKLREAAEIISEHPMALQLRTLQTISDVASDKSNVIVLML 240
Query: 241 PMEMLKLFKSLSDAAQVYAKKEKEKEKE 268
PMEMLKLFKSLSDAAQVYAKKEKEKEKE
Sbjct: 241 PMEMLKLFKSLSDAAQVYAKKEKEKEKE 268
>sp|O59180|YF11_PYRHO HYPOTHETICAL PROTEIN PH1511 >gi|7447604|pir||C71027 probable
erythrocyte band7 integral membrane protein - Pyrococcus
horikoshii >gi|3257936|dbj|BAA30619.1| (AP000006) 266aa
long hypothetical erythrocyte band7 integral membrane
protein [Pyrococcus horikoshii]
Length = 266
Score = 483 bits (1230), Expect = e-136
Identities = 252/266 (94%), Positives = 261/266 (97%)
Query: 1 MILPTNFFVTTIILLFILIFLASAIKIVKEYERAVIFRLGRVVGARGPGLFFIIPIFEKA 60
M+ TNFFVT+IILLFILIFLASAIKIVKEYERAVIFRLGRVVGARGPGLFFIIPIFEKA
Sbjct: 1 MMFATNFFVTSIILLFILIFLASAIKIVKEYERAVIFRLGRVVGARGPGLFFIIPIFEKA 60
Query: 61 VIVDLRTQVLDVPVQETITKDNVPVRVNAVVYFRVVDPVKAVTQVKNYIMATSQISQTTL 120
VIVDLRTQVLDVPVQETITKDNVPVRVNAVVYFRVVDPVKAVTQVKNYIMATSQISQTTL
Sbjct: 61 VIVDLRTQVLDVPVQETITKDNVPVRVNAVVYFRVVDPVKAVTQVKNYIMATSQISQTTL 120
Query: 121 RSVIGQAHLDELLSERDKLNMQLQRIIDEATDPWGIKVTAVEIKDVELPAGMQRAMAKQA 180
RSVIGQAHLDELLSERDKLNMQLQRIIDEATDPWGIKVTAVEIKDVELPAGMQ+AMA+QA
Sbjct: 121 RSVIGQAHLDELLSERDKLNMQLQRIIDEATDPWGIKVTAVEIKDVELPAGMQKAMARQA 180
Query: 181 EAERERRARITLAEAERQAAEKLREAAEIISEHPMALQLRTLQTISDVASDKSNVIVLML 240
EAERERRARITLAEAERQAAEKLREAAEIISEHPMALQLRTLQTISDVA DKSNVIVLML
Sbjct: 181 EAERERRARITLAEAERQAAEKLREAAEIISEHPMALQLRTLQTISDVAGDKSNVIVLML 240
Query: 241 PMEMLKLFKSLSDAAQVYAKKEKEKE 266
PMEMLKLFKSLSDAA+ Y KK++E++
Sbjct: 241 PMEMLKLFKSLSDAAEAYMKKKEEEK 266
>gi|11499015 membrane protein [Archaeoglobus fulgidus]
>gi|6647985|sp|O28852|YE20_ARCFU HYPOTHETICAL PROTEIN
AF1420 >gi|7447605|pir||C69427 membrane protein homolog
- Archaeoglobus fulgidus >gi|2649154|gb|AAB89829.1|
(AE001006) membrane protein [Archaeoglobus fulgidus]
Length = 249
Score = 314 bits (797), Expect = 5e-85
Identities = 155/236 (65%), Positives = 200/236 (84%)
Query: 13 ILLFILIFLASAIKIVKEYERAVIFRLGRVVGARGPGLFFIIPIFEKAVIVDLRTQVLDV 72
+L+ +++FL SA++IVKEYER VIFRLGR+VGARGPGLFFIIPI E V+VDLRT DV
Sbjct: 8 LLIVVVLFLLSAVRIVKEYERGVIFRLGRLVGARGPGLFFIIPILENMVVVDLRTVTYDV 67
Query: 73 PVQETITKDNVPVRVNAVVYFRVVDPVKAVTQVKNYIMATSQISQTTLRSVIGQAHLDEL 132
P QE +TKDNV V+VNAVVY+RVVDP KAVT+V +Y AT+Q++QTTLRS+IGQA LDE+
Sbjct: 68 PSQEVVTKDNVTVKVNAVVYYRVVDPAKAVTEVFDYQYATAQLAQTTLRSIIGQAELDEV 127
Query: 133 LSERDKLNMQLQRIIDEATDPWGIKVTAVEIKDVELPAGMQRAMAKQAEAERERRARITL 192
LSERDKLN++LQ+IIDE T+PWGIKVTAVEIKDVELP M+R MA QAEAERERR++I
Sbjct: 128 LSERDKLNVKLQQIIDEETNPWGIKVTAVEIKDVELPEEMRRIMAMQAEAERERRSKIIR 187
Query: 193 AEAERQAAEKLREAAEIISEHPMALQLRTLQTISDVASDKSNVIVLMLPMEMLKLF 248
AE E QAA KLREAA+++++ A+ LR LQT+++++++++ IV+ +P+E+LK F
Sbjct: 188 AEGEYQAAMKLREAADVLAQSEGAILLRYLQTLNEISAEQNTTIVMPIPVELLKFF 243
>pir||F70378 erythrocyte band 7 homolog - Aquifex aeolicus
>gi|2983432|gb|AAC07014.1| (AE000713) erythrocyte band 7
homolog [Aquifex aeolicus]
Length = 253
Score = 296 bits (750), Expect = 2e-79
Identities = 141/237 (59%), Positives = 191/237 (80%)
Query: 13 ILLFILIFLASAIKIVKEYERAVIFRLGRVVGARGPGLFFIIPIFEKAVIVDLRTQVLDV 72
I + +L+FLASAIK++ EYERAV+FRLGRV+GA+GPGL +IPI ++ V V LRT LDV
Sbjct: 11 IAILVLLFLASAIKVIPEYERAVVFRLGRVIGAKGPGLIIVIPIIDRIVRVSLRTVTLDV 70
Query: 73 PVQETITKDNVPVRVNAVVYFRVVDPVKAVTQVKNYIMATSQISQTTLRSVIGQAHLDEL 132
P Q+ ITKDNV V+V+AVVYFRVVDPVKA+ +V++Y ATSQI+QTTLRSV G+A LDEL
Sbjct: 71 PTQDVITKDNVTVQVDAVVYFRVVDPVKAIVEVEDYFYATSQIAQTTLRSVCGEAELDEL 130
Query: 133 LSERDKLNMQLQRIIDEATDPWGIKVTAVEIKDVELPAGMQRAMAKQAEAERERRARITL 192
LS+R+K+NM+LQ IID TDPWG+KV AVE+K ++LP +++A+A+QAEAERERRA+I
Sbjct: 131 LSQREKINMKLQEIIDRQTDPWGVKVIAVELKKIDLPEELRKALARQAEAERERRAKIIS 190
Query: 193 AEAERQAAEKLREAAEIISEHPMALQLRTLQTISDVASDKSNVIVLMLPMEMLKLFK 249
AEAE QAA+KL EAA I+++ P+A+QLR L+T+ + + ++ P+E+++ K
Sbjct: 191 AEAEYQAAQKLLEAARILAQEPIAIQLRYLETLHTIGLHNAKTVIFPFPLELVEFMK 247
>pir||D72522 probable erythrocyte band 7 integral membrane protein APE2153 -
Aeropyrum pernix (strain K1) >gi|5105852|dbj|BAA81164.1|
(AP000063) 278aa long hypothetical erythrocyte band 7
integral membrane protein [Aeropyrum pernix]
Length = 278
Score = 273 bits (691), Expect = 1e-72
Identities = 139/231 (60%), Positives = 178/231 (76%)
Query: 12 IILLFILIFLASAIKIVKEYERAVIFRLGRVVGARGPGLFFIIPIFEKAVIVDLRTQVLD 71
+ LL +LI L+ +IKIV+EYERAVIFRLGR++G +GPGLF IIP + V VDLR +D
Sbjct: 26 VALLIVLILLSMSIKIVREYERAVIFRLGRLIGVKGPGLFLIIPFVDTLVKVDLRIVTVD 85
Query: 72 VPVQETITKDNVPVRVNAVVYFRVVDPVKAVTQVKNYIMATSQISQTTLRSVIGQAHLDE 131
+P Q TITKDNV V V+AVVY++V DP KAV +++NY A ++QTTLR VIGQ LD+
Sbjct: 86 IPEQRTITKDNVTVGVDAVVYYKVFDPEKAVVRIENYHYAVVMLAQTTLRDVIGQVELDD 145
Query: 132 LLSERDKLNMQLQRIIDEATDPWGIKVTAVEIKDVELPAGMQRAMAKQAEAERERRARIT 191
LL++R+++N +LQ I+D+ TDPWGIKVTAV IK+V+LP M RAMAKQAEAER RRARI
Sbjct: 146 LLTKREEINKKLQEILDQLTDPWGIKVTAVTIKEVKLPESMLRAMAKQAEAERWRRARII 205
Query: 192 LAEAERQAAEKLREAAEIISEHPMALQLRTLQTISDVASDKSNVIVLMLPM 242
AE ERQAA+ + EAAE +HP AL+LR LQT+ +VA +K+ V+V L M
Sbjct: 206 EAEGERQAAKIMAEAAEFYEKHPAALRLRELQTLIEVAKEKNLVVVTPLRM 256
>pir||A83590 probable stomatin-like protein PA0452 [imported] - Pseudomonas
aeruginosa (strain PAO1)
>gi|9946311|gb|AAG03841.1|AE004482_8 (AE004482) probable
stomatin-like protein [Pseudomonas aeruginosa]
Length = 264
Score = 263 bits (665), Expect = 2e-69
Identities = 126/233 (54%), Positives = 182/233 (78%)
Query: 12 IILLFILIFLASAIKIVKEYERAVIFRLGRVVGARGPGLFFIIPIFEKAVIVDLRTQVLD 71
++L+F+ + L SA++I++EYER V+F+LGR +GPGL +IP ++ V +DLRT VLD
Sbjct: 10 MLLVFLALLLFSALRILREYERGVVFQLGRFWKVKGPGLVLVIPAIQQMVRIDLRTIVLD 69
Query: 72 VPVQETITKDNVPVRVNAVVYFRVVDPVKAVTQVKNYIMATSQISQTTLRSVIGQAHLDE 131
VP Q+ I++DNV V+VNAVVYFRV+DP KA+ QV+NY+ ATSQ++QTTLR+V+G+ LDE
Sbjct: 70 VPPQDVISRDNVSVKVNAVVYFRVLDPQKAIIQVENYLAATSQLAQTTLRAVLGKHELDE 129
Query: 132 LLSERDKLNMQLQRIIDEATDPWGIKVTAVEIKDVELPAGMQRAMAKQAEAERERRARIT 191
+L+ER++LN+ +Q+++D TD WGIKV VEIK V+L M RA+A+QAEAERERRA++
Sbjct: 130 MLAERERLNLDIQQVLDAQTDAWGIKVANVEIKHVDLNESMVRAIARQAEAERERRAKVI 189
Query: 192 LAEAERQAAEKLREAAEIISEHPMALQLRTLQTISDVASDKSNVIVLMLPMEM 244
AE E QA+EKL +AA+++ A+QLR +QT+ +A DKS+ IV +P+E+
Sbjct: 190 HAEGELQASEKLMQAAQMLGRQSGAMQLRYMQTLGAIAGDKSSTIVFPMPIEL 242
>pir||G69104 stomatin-like protein - Methanobacterium thermoautotrophicum
(strain Delta H) >gi|2622911|gb|AAB86246.1| (AE000933)
stomatin-like protein [Methanobacterium
thermoautotrophicum]
Length = 297
Score = 250 bits (632), Expect = 1e-65
Identities = 120/226 (53%), Positives = 175/226 (77%)
Query: 12 IILLFILIFLASAIKIVKEYERAVIFRLGRVVGARGPGLFFIIPIFEKAVIVDLRTQVLD 71
++ I++ ++ ++KIVK+YER V+FRLG+V+G R PGL IIPI ++ V V LR +
Sbjct: 51 LLAAVIIVIISLSLKIVKQYERGVVFRLGKVIGVREPGLRIIIPIIDRMVRVSLRIVTMP 110
Query: 72 VPVQETITKDNVPVRVNAVVYFRVVDPVKAVTQVKNYIMATSQISQTTLRSVIGQAHLDE 131
+P Q+ IT+DNV + V AV YF+V DP++AV +++Y A +QISQTT+R+VIGQ LDE
Sbjct: 111 IPSQKIITQDNVSIDVAAVAYFKVADPLRAVVAIEDYYGAVNQISQTTVRNVIGQFVLDE 170
Query: 132 LLSERDKLNMQLQRIIDEATDPWGIKVTAVEIKDVELPAGMQRAMAKQAEAERERRARIT 191
+LSE ++N +++ IIDE ++PWGI VT VEIKD++LP GMQRAMA+QAEAER++RA+I
Sbjct: 171 VLSETARINEKIKEIIDEHSEPWGINVTTVEIKDIKLPEGMQRAMARQAEAERDKRAKII 230
Query: 192 LAEAERQAAEKLREAAEIISEHPMALQLRTLQTISDVASDKSNVIV 237
AE E +A KL EAA++I +HP+ALQLR LQ ++++A++K++ IV
Sbjct: 231 TAEGEYFSAAKLGEAADVIEKHPVALQLRNLQVLAEIATEKNSTIV 276
>gb|AAF48928.1| (AE003511) CG7635 gene product [Drosophila melanogaster]
Length = 350
Score = 245 bits (620), Expect = 3e-64
Identities = 124/240 (51%), Positives = 176/240 (72%), Gaps = 7/240 (2%)
Query: 7 FFVTTIILLFILIFLASAIKIVKEYERAVIFRLGRVV-GARGPGLFFIIPIFEKAVIVDL 65
F +T+ I +FI K+V EYERA+IFRLGR+ GARGPG+FFI+P ++ VDL
Sbjct: 77 FIITSPIAIFI------CFKVVAEYERAIIFRLGRLSGGARGPGMFFILPCIDEYRKVDL 130
Query: 66 RTQVLDVPVQETITKDNVPVRVNAVVYFRVVDPVKAVTQVKNYIMATSQISQTTLRSVIG 125
RT +VP QE +TKD+V V V+AVVY+R+ DP+ AV QV++Y M+T ++ TTLR+++G
Sbjct: 131 RTVTFNVPQQEMLTKDSVTVTVDAVVYYRISDPLYAVIQVEDYSMSTRLLAATTLRNIVG 190
Query: 126 QAHLDELLSERDKLNMQLQRIIDEATDPWGIKVTAVEIKDVELPAGMQRAMAKQAEAERE 185
+L ELL+ER+ L +Q +DEAT+PWG+ V VEIKDV LP MQRAMA +AEA R+
Sbjct: 191 TRNLSELLTERETLAHNMQATLDEATEPWGVMVERVEIKDVSLPVSMQRAMAAEAEAARD 250
Query: 186 RRARITLAEAERQAAEKLREAAEIISEHPMALQLRTLQTISDVASDKSNVIVLMLPMEML 245
RA++ AE E+++A L+EA+++IS P ALQLR LQT+S ++++K++ I+ LPME+L
Sbjct: 251 ARAKVIAAEGEKKSATALKEASDVISASPSALQLRYLQTLSSISAEKNSTIIFPLPMELL 310
>gb|AAC64873.1| (AF034831) stomatin like protein [Rhizobium etli]
Length = 222
Score = 242 bits (612), Expect = 3e-63
Identities = 119/211 (56%), Positives = 163/211 (76%)
Query: 34 AVIFRLGRVVGARGPGLFFIIPIFEKAVIVDLRTQVLDVPVQETITKDNVPVRVNAVVYF 93
A F LGR G +GPGL +IP ++ + VDLRT+VLDVP Q+ I+ DNV VRV+AV+YF
Sbjct: 3 AASFTLGRFTGVKGPGLILLIPYVQQMIRVDLRTRVLDVPSQDVISHDNVSVRVSAVIYF 62
Query: 94 RVVDPVKAVTQVKNYIMATSQISQTTLRSVIGQAHLDELLSERDKLNMQLQRIIDEATDP 153
RV+DP K+ QV++++MATSQ++QTTLRSV+G+ LDE+L+ERD+LN +Q I+D TD
Sbjct: 63 RVIDPEKSTIQVEDFMMATSQLAQTTLRSVLGKHDLDEMLAERDRLNSDIQEILDAQTDA 122
Query: 154 WGIKVTAVEIKDVELPAGMQRAMAKQAEAERERRARITLAEAERQAAEKLREAAEIISEH 213
WGIKV VEIK V++ M RA+A+QAEAERERRA++ AE E+QAA KL EAAEI+++
Sbjct: 123 WGIKVATVEIKHVDINESMIRAIARQAEAERERRAKVINAEGEQQAAAKLLEAAEILAKQ 182
Query: 214 PMALQLRTLQTISDVASDKSNVIVLMLPMEM 244
P A+QLR L T++ +AS+K++ I+ PME+
Sbjct: 183 PEAMQLRYLSTLNVIASEKTSTILFPFPMEL 213
>pir||T34691 hypothetical protein SC1B5.13c SC1B5.13c - Streptomyces coelicolor
>gi|3130017|emb|CAA18987.1| (AL023517) hypothetical
protein SC1B5.13c [Streptomyces coelicolor A3(2)]
Length = 262
Score = 240 bits (605), Expect = 2e-62
Identities = 121/237 (51%), Positives = 177/237 (74%), Gaps = 1/237 (0%)
Query: 18 LIFLASAIKIVKEYERAVIFRLGRVVG-ARGPGLFFIIPIFEKAVIVDLRTQVLDVPVQE 76
++++ASA ++VK+YER V+FRLGR+ G ARGPG I+P ++ V+++ L VP QE
Sbjct: 17 VLYVASAARVVKQYERGVVFRLGRLAGQARGPGFTMIVPFVDRLHKVNMQIITLPVPAQE 76
Query: 77 TITKDNVPVRVNAVVYFRVVDPVKAVTQVKNYIMATSQISQTTLRSVIGQAHLDELLSER 136
IT+DNV VRV+AVVYF+VVD A+ +V++Y A SQ++QT+LRS+IG++ LD+LLS+R
Sbjct: 77 GITRDNVTVRVDAVVYFKVVDAANALVRVEDYRFAVSQMAQTSLRSIIGKSDLDDLLSDR 136
Query: 137 DKLNMQLQRIIDEATDPWGIKVTAVEIKDVELPAGMQRAMAKQAEAERERRARITLAEAE 196
+KLN L+ +ID WG+++ VEIKDV LP M+R+MA+QAEA+RERRAR+ A+AE
Sbjct: 137 EKLNQGLELMIDSPAVGWGVQIDRVEIKDVSLPDTMKRSMARQAEADRERRARVINADAE 196
Query: 197 RQAAEKLREAAEIISEHPMALQLRTLQTISDVASDKSNVIVLMLPMEMLKLFKSLSD 253
QA++ L EAA +SE P ALQLR LQT+ VA++K++ +VL P+E+L+ + +
Sbjct: 197 LQASKVLAEAAREMSETPAALQLRLLQTVVAVAAEKNSTLVLPFPVELLRFLEKAQE 253
>emb|CAA73876.1| (Y13473) stomatin [Danio rerio]
Length = 284
Score = 236 bits (597), Expect = 1e-61
Identities = 120/243 (49%), Positives = 174/243 (71%), Gaps = 2/243 (0%)
Query: 8 FVTTIILLFILIFLASAIKIVKEYERAVIFRLGRVV--GARGPGLFFIIPIFEKAVIVDL 65
F + LL + + + IKIVKEYERA+IFRLGR++ GA+GPGLFFI+P + + VD+
Sbjct: 39 FSILLTLLTLPLSIWMCIKIVKEYERAIIFRLGRILRGGAKGPGLFFILPCTDSFINVDM 98
Query: 66 RTQVLDVPVQETITKDNVPVRVNAVVYFRVVDPVKAVTQVKNYIMATSQISQTTLRSVIG 125
RT D+P QE +TKD+V V V+ VVY+RV + AV + N AT ++QTTLR+V+G
Sbjct: 99 RTITFDIPPQEVLTKDSVTVSVDGVVYYRVQNATLAVANITNADAATRLLAQTTLRNVLG 158
Query: 126 QAHLDELLSERDKLNMQLQRIIDEATDPWGIKVTAVEIKDVELPAGMQRAMAKQAEAERE 185
+L E+LS+R+++ +Q +D+ATD WGIKV VEIKDV+LP +QRAMA +AEA RE
Sbjct: 159 TKNLAEILSDREEIAHSMQSTLDDATDDWGIKVERVEIKDVKLPLQLQRAMAAEAEASRE 218
Query: 186 RRARITLAEAERQAAEKLREAAEIISEHPMALQLRTLQTISDVASDKSNVIVLMLPMEML 245
RA++ AE E A+ L+EA+ +I+E P ALQLR LQT++ +A++K++ I+ LP++M+
Sbjct: 219 ARAKVIAAEGEMNASRALKEASLVIAESPSALQLRYLQTLNTIAAEKNSTIIFPLPIDMM 278
Query: 246 KLF 248
+ F
Sbjct: 279 QSF 281
>gb|AAA58432.1| (M81635) stomatin peptide [Homo sapiens]
Length = 288
Score = 236 bits (595), Expect = 3e-61
Identities = 122/247 (49%), Positives = 177/247 (71%), Gaps = 4/247 (1%)
Query: 2 ILPTNFFVTTIILLFILIFLASAIKIVKEYERAVIFRLGRVV--GARGPGLFFIIPIFEK 59
IL F+ T+I I I++ IKI+KEYERA+IFRLGR++ GA+GPGLFFI+P +
Sbjct: 33 ILVAFSFLFTVITFPISIWMC--IKIIKEYERAIIFRLGRILQGGAKGPGLFFILPCTDS 90
Query: 60 AVIVDLRTQVLDVPVQETITKDNVPVRVNAVVYFRVVDPVKAVTQVKNYIMATSQISQTT 119
+ VD+RT D+P QE +TKD+V + V+ VVY+RV + AV + N AT ++QTT
Sbjct: 91 FIKVDMRTISFDIPPQEILTKDSVTISVDGVVYYRVQNATLAVANITNADSATRLLAQTT 150
Query: 120 LRSVIGQAHLDELLSERDKLNMQLQRIIDEATDPWGIKVTAVEIKDVELPAGMQRAMAKQ 179
LR+V+G +L ++LS+R+++ +Q +D+ATD WGIKV VEIKDV+LP +QRAMA +
Sbjct: 151 LRNVLGTKNLSQILSDREEIAHNMQSTLDDATDAWGIKVERVEIKDVKLPVQLQRAMAAE 210
Query: 180 AEAERERRARITLAEAERQAAEKLREAAEIISEHPMALQLRTLQTISDVASDKSNVIVLM 239
AEA RE RA++ AE E A+ L+EA+ +I+E P ALQLR LQT++ +A++K++ IV
Sbjct: 211 AEASREARAKVIAAEGEMNASRALKEASMVITESPAALQLRYLQTLTTIAAEKNSTIVFP 270
Query: 240 LPMEMLK 246
LP++ML+
Sbjct: 271 LPIDMLQ 277
>gi|4758276 erythrocyte membrane protein band 7.2 (stomatin) [Homo sapiens]
>gi|11427638|ref|XP_005343.1| erythrocyte membrane
protein band 7.2 (stomatin) [Homo sapiens]
>gi|114823|sp|P27105|BAN7_HUMAN ERYTHROCYTE BAND 7
INTEGRAL MEMBRANE PROTEIN (STOMATIN) (PROTEIN 7.2B)
>gi|88143|pir||S17659 membrane protein 7, erythrocyte -
human >gi|31069|emb|CAA42671.1| (X60067) erythrocyte
band 7 integral membrane protein [Homo sapiens]
>gi|1161562|emb|CAA59436.1| (X85116) stomatin [Homo
sapiens] >gi|1586566|prf||2204264A band 7 integral
membrane protein [Homo sapiens]
Length = 288
Score = 236 bits (595), Expect = 3e-61
Identities = 122/247 (49%), Positives = 177/247 (71%), Gaps = 4/247 (1%)
Query: 2 ILPTNFFVTTIILLFILIFLASAIKIVKEYERAVIFRLGRVV--GARGPGLFFIIPIFEK 59
IL F+ T+I I I++ IKI+KEYERA+IFRLGR++ GA+GPGLFFI+P +
Sbjct: 33 ILVAFSFLFTVITFPISIWMC--IKIIKEYERAIIFRLGRILQGGAKGPGLFFILPCTDS 90
Query: 60 AVIVDLRTQVLDVPVQETITKDNVPVRVNAVVYFRVVDPVKAVTQVKNYIMATSQISQTT 119
+ VD+RT D+P QE +TKD+V + V+ VVY+RV + AV + N AT ++QTT
Sbjct: 91 FIKVDMRTISFDIPPQEILTKDSVTISVDGVVYYRVQNATLAVANITNADSATRLLAQTT 150
Query: 120 LRSVIGQAHLDELLSERDKLNMQLQRIIDEATDPWGIKVTAVEIKDVELPAGMQRAMAKQ 179
LR+V+G +L ++LS+R+++ +Q +D+ATD WGIKV VEIKDV+LP +QRAMA +
Sbjct: 151 LRNVLGTKNLSQILSDREEIAHNMQSTLDDATDAWGIKVERVEIKDVKLPVQLQRAMAAE 210
Query: 180 AEAERERRARITLAEAERQAAEKLREAAEIISEHPMALQLRTLQTISDVASDKSNVIVLM 239
AEA RE RA++ AE E A+ L+EA+ +I+E P ALQLR LQT++ +A++K++ IV
Sbjct: 211 AEASREARAKVIAAEGEMNASRALKEASMVITESPAALQLRYLQTLTTIAAEKNSTIVFP 270
Query: 240 LPMEMLK 246
LP++ML+
Sbjct: 271 LPIDMLQ 277
>gb|AAC50296.1| (U33931) band 7.2b stomatin [Homo sapiens]
>gi|1585683|prf||2201444A membrane protein band 7.2b
[Homo sapiens]
Length = 296
Score = 236 bits (595), Expect = 3e-61
Identities = 122/247 (49%), Positives = 177/247 (71%), Gaps = 4/247 (1%)
Query: 2 ILPTNFFVTTIILLFILIFLASAIKIVKEYERAVIFRLGRVV--GARGPGLFFIIPIFEK 59
IL F+ T+I I I++ IKI+KEYERA+IFRLGR++ GA+GPGLFFI+P +
Sbjct: 41 ILVAFSFLFTVITFPISIWMC--IKIIKEYERAIIFRLGRILQGGAKGPGLFFILPCTDS 98
Query: 60 AVIVDLRTQVLDVPVQETITKDNVPVRVNAVVYFRVVDPVKAVTQVKNYIMATSQISQTT 119
+ VD+RT D+P QE +TKD+V + V+ VVY+RV + AV + N AT ++QTT
Sbjct: 99 FIKVDMRTISFDIPPQEILTKDSVTISVDGVVYYRVQNATLAVANITNADSATRLLAQTT 158
Query: 120 LRSVIGQAHLDELLSERDKLNMQLQRIIDEATDPWGIKVTAVEIKDVELPAGMQRAMAKQ 179
LR+V+G +L ++LS+R+++ +Q +D+ATD WGIKV VEIKDV+LP +QRAMA +
Sbjct: 159 LRNVLGTKNLSQILSDREEIAHNMQSTLDDATDAWGIKVERVEIKDVKLPVQLQRAMAAE 218
Query: 180 AEAERERRARITLAEAERQAAEKLREAAEIISEHPMALQLRTLQTISDVASDKSNVIVLM 239
AEA RE RA++ AE E A+ L+EA+ +I+E P ALQLR LQT++ +A++K++ IV
Sbjct: 219 AEASREARAKVIAAEGEMNASRALKEASMVITESPAALQLRYLQTLTTIAAEKNSTIVFP 278
Query: 240 LPMEMLK 246
LP++ML+
Sbjct: 279 LPIDMLQ 285
>sp|Q27433|MEC2_CAEEL MECHANOSENSORY PROTEIN 2 >gi|2133486|pir||S60260 stomatin-like
protein - Caenorhabditis elegans
>gi|973210|gb|AAA87551.1| (U26735) MEC-2 [Caenorhabditis
elegans] >gi|973212|gb|AAA87552.1| (U26736) MEC-2
[Caenorhabditis elegans] >gi|1086680|gb|AAA82333.1|
(U41021) C. elegans mec-2 (GB:U26735) [Caenorhabditis
elegans] >gi|1585780|prf||2201490A stomatin-like protein
[Caenorhabditis elegans]
Length = 481
Score = 235 bits (594), Expect = 3e-61
Identities = 118/244 (48%), Positives = 177/244 (72%), Gaps = 8/244 (3%)
Query: 13 ILLFILIFLA------SAIKIVKEYERAVIFRLGRVV--GARGPGLFFIIPIFEKAVIVD 64
IL ++LIF IK+V+EYERAVIFRLGR++ GA+GPG+FFI+P + VD
Sbjct: 123 ILSYLLIFFTLPISACMCIKVVQEYERAVIFRLGRLMPGGAKGPGIFFIVPCIDTYRKVD 182
Query: 65 LRTQVLDVPVQETITKDNVPVRVNAVVYFRVVDPVKAVTQVKNYIMATSQISQTTLRSVI 124
LR +VP QE ++KD+V V V+AVVYFR+ + +VT V++ +T ++QTTLR+++
Sbjct: 183 LRVLSFEVPPQEILSKDSVTVAVDAVVYFRISNATISVTNVEDAARSTKLLAQTTLRNIL 242
Query: 125 GQAHLDELLSERDKLNMQLQRIIDEATDPWGIKVTAVEIKDVELPAGMQRAMAKQAEAER 184
G L E+LS+R+ ++ Q+Q +DEAT+PWG+KV VE+KDV LP +QRAMA +AEA R
Sbjct: 243 GTKTLAEMLSDREAISHQMQTTLDEATEPWGVKVERVEVKDVRLPVQLQRAMAAEAEAAR 302
Query: 185 ERRARITLAEAERQAAEKLREAAEIISEHPMALQLRTLQTISDVASDKSNVIVLMLPMEM 244
E RA++ +AE E++A+ L+EAAE+I+E P ALQLR LQT++ ++++K++ I+ P+++
Sbjct: 303 EARAKVIVAEGEQKASRALKEAAEVIAESPSALQLRYLQTLNSISAEKNSTIIFPFPIDL 362
Query: 245 LKLF 248
L F
Sbjct: 363 LSAF 366
>gb|AAK42367.1| Erythrocyte band 7 membrane protein homolog [Sulfolobus
solfataricus]
Length = 267
Score = 234 bits (590), Expect = 1e-60
Identities = 112/226 (49%), Positives = 166/226 (72%)
Query: 13 ILLFILIFLASAIKIVKEYERAVIFRLGRVVGARGPGLFFIIPIFEKAVIVDLRTQVLDV 72
+++ I+IF+A + ++V+E+ERAV+ RLGR + +GPG+ F+IP ++ ++VDLR ++V
Sbjct: 14 LIIIIIIFIAMSFRVVREWERAVVLRLGRFLRVKGPGIIFLIPFVDRPLVVDLRVNTVEV 73
Query: 73 PVQETITKDNVPVRVNAVVYFRVVDPVKAVTQVKNYIMATSQISQTTLRSVIGQAHLDEL 132
P Q +TKDNV V V+AVVY++VVDP KAV V NY +A ++QT+LR ++GQ LDEL
Sbjct: 74 PPQTILTKDNVTVSVDAVVYYKVVDPQKAVLSVFNYNVAVLNLAQTSLRDIVGQMELDEL 133
Query: 133 LSERDKLNMQLQRIIDEATDPWGIKVTAVEIKDVELPAGMQRAMAKQAEAERERRARITL 192
LS+R+++N ++Q I+D T+ WGIKVTAV I+D+ L + AMAKQAEAER RRA++ L
Sbjct: 134 LSKREEINKRIQEILDVTTEGWGIKVTAVTIRDIRLSQDLLSAMAKQAEAERLRRAKVIL 193
Query: 193 AEAERQAAEKLREAAEIISEHPMALQLRTLQTISDVASDKSNVIVL 238
+E ERQAA L +A+ +P ALQLR L+T+SD++ +IV+
Sbjct: 194 SEGERQAASILADASAYYKNNPSALQLRFLETLSDISQRGGLIIVV 239
>gb|AAC64173.1| (AF093620) stomatin [Mus musculus]
Length = 284
Score = 231 bits (584), Expect = 5e-60
Identities = 121/247 (48%), Positives = 173/247 (69%), Gaps = 4/247 (1%)
Query: 2 ILPTNFFVTTIILLFILIFLASAIKIVKEYERAVIFRLGRVV--GARGPGLFFIIPIFEK 59
IL F II I I++ IKIVKEYER +IFRLGR++ GA+GPGLFFI+P +
Sbjct: 33 ILVAASFFFVIITFPISIWIC--IKIVKEYERVIIFRLGRILQGGAKGPGLFFILPCTDS 90
Query: 60 AVIVDLRTQVLDVPVQETITKDNVPVRVNAVVYFRVVDPVKAVTQVKNYIMATSQISQTT 119
+ VD+RT D+P QE +TKD+V + V+ VVY+RV + AV + N AT ++QTT
Sbjct: 91 LIKVDMRTISFDIPPQEVLTKDSVTISVDGVVYYRVQNATLAVANITNADSATRLLAQTT 150
Query: 120 LRSVIGQAHLDELLSERDKLNMQLQRIIDEATDPWGIKVTAVEIKDVELPAGMQRAMAKQ 179
LR+ +G +L ++LS+R+++ +Q +D+ATD WGIKV VEIKDV+LP +QRAMA +
Sbjct: 151 LRNALGTKNLSQILSDREEIAHHMQSTLDDATDDWGIKVERVEIKDVKLPVQLQRAMAAE 210
Query: 180 AEAERERRARITLAEAERQAAEKLREAAEIISEHPMALQLRTLQTISDVASDKSNVIVLM 239
AEA RE RA++ AE E A+ L+EA+ +I+E P ALQLR LQT++ +A++K++ IV
Sbjct: 211 AEAAREARAKVIAAEGEMNASRALKEASMVITESPAALQLRYLQTLTTIAAEKNSTIVFP 270
Query: 240 LPMEMLK 246
LP++ML+
Sbjct: 271 LPVDMLQ 277
>gi|7710018 erythrocyte protein band 7.2; protein 7.2b [Mus musculus]
>gi|972907|gb|AAA75024.1| (U17297) integral membrane
phosphoprotein band 7.2b [Mus musculus]
>gi|1582614|prf||2119189A band 7.2b protein [Mus
musculus]
Length = 284
Score = 231 bits (584), Expect = 5e-60
Identities = 121/247 (48%), Positives = 173/247 (69%), Gaps = 4/247 (1%)
Query: 2 ILPTNFFVTTIILLFILIFLASAIKIVKEYERAVIFRLGRVV--GARGPGLFFIIPIFEK 59
IL F II I I++ IKIVKEYER +IFRLGR++ GA+GPGLFFI+P +
Sbjct: 33 ILVAASFFFVIITFPISIWIC--IKIVKEYERVIIFRLGRILQGGAKGPGLFFILPCTDS 90
Query: 60 AVIVDLRTQVLDVPVQETITKDNVPVRVNAVVYFRVVDPVKAVTQVKNYIMATSQISQTT 119
+ VD+RT D+P QE +TKD+V + V+ VVY+RV + AV + N AT ++QTT
Sbjct: 91 LIKVDMRTISFDIPPQEVLTKDSVTISVDGVVYYRVQNATLAVANITNADSATRLLAQTT 150
Query: 120 LRSVIGQAHLDELLSERDKLNMQLQRIIDEATDPWGIKVTAVEIKDVELPAGMQRAMAKQ 179
LR+ +G +L ++LS+R+++ +Q +D+ATD WGIKV VEIKDV+LP +QRAMA +
Sbjct: 151 LRNALGTKNLSQILSDREEIAHHMQSTLDDATDDWGIKVERVEIKDVKLPVQLQRAMAAE 210
Query: 180 AEAERERRARITLAEAERQAAEKLREAAEIISEHPMALQLRTLQTISDVASDKSNVIVLM 239
AEA RE RA++ AE E A+ L+EA+ +I+E P ALQLR LQT++ +A++K++ IV
Sbjct: 211 AEAAREARAKVIAAEGEMNASRALKEASMVITESPAALQLRYLQTLTTIAAEKNSTIVFP 270
Query: 240 LPMEMLK 246
LP++ML+
Sbjct: 271 LPVDMLQ 277
>sp|P54116|BAN7_MOUSE ERYTHROCYTE BAND 7 INTEGRAL MEMBRANE PROTEIN (STOMATIN) (PROTEIN
7.2B)
Length = 284
Score = 231 bits (584), Expect = 5e-60
Identities = 120/247 (48%), Positives = 174/247 (69%), Gaps = 4/247 (1%)
Query: 2 ILPTNFFVTTIILLFILIFLASAIKIVKEYERAVIFRLGRVV--GARGPGLFFIIPIFEK 59
IL F+ +I I I++ IKIVKEYER +IFRLGR++ GA+GPGLFFI+P +
Sbjct: 33 ILVAVSFIFVLITFPISIWIC--IKIVKEYERVIIFRLGRILQGGAKGPGLFFILPCTDS 90
Query: 60 AVIVDLRTQVLDVPVQETITKDNVPVRVNAVVYFRVVDPVKAVTQVKNYIMATSQISQTT 119
+ VD+RT D+P QE +TKD+V + V+ VVY+RV + AV + N AT ++QTT
Sbjct: 91 FIKVDMRTISFDIPPQEVLTKDSVTISVDGVVYYRVQNATLAVANITNADSATRLLAQTT 150
Query: 120 LRSVIGQAHLDELLSERDKLNMQLQRIIDEATDPWGIKVTAVEIKDVELPAGMQRAMAKQ 179
LR+ +G +L ++LS+R+++ +Q +D+ATD WGIKV VEIKDV+LP +QRAMA +
Sbjct: 151 LRNALGTKNLSQILSDREEIAHHMQSTLDDATDDWGIKVERVEIKDVKLPVQLQRAMAAE 210
Query: 180 AEAERERRARITLAEAERQAAEKLREAAEIISEHPMALQLRTLQTISDVASDKSNVIVLM 239
AEA RE RA++ AE E A+ L+EA+ +I+E P ALQLR LQT++ +A++K++ IV
Sbjct: 211 AEAAREARAKVIAAEGEMNASRALKEASMVITESPAALQLRYLQTLTTIAAEKNSTIVFP 270
Query: 240 LPMEMLK 246
LP++ML+
Sbjct: 271 LPVDMLQ 277
>pir||JC5221 stomatin - mouse >gi|975689|emb|CAA62503.1| (X91043) erthyrocyte
band 7 integral membrane protein, protein 7.2B, stomatin
[Mus musculus]
Length = 284
Score = 231 bits (584), Expect = 5e-60
Identities = 120/247 (48%), Positives = 174/247 (69%), Gaps = 4/247 (1%)
Query: 2 ILPTNFFVTTIILLFILIFLASAIKIVKEYERAVIFRLGRVV--GARGPGLFFIIPIFEK 59
IL F+ +I I I++ IKIVKEYER +IFRLGR++ GA+GPGLFFI+P +
Sbjct: 33 ILVAVSFIFVLITFPISIWIC--IKIVKEYERVIIFRLGRILQGGAKGPGLFFILPCTDS 90
Query: 60 AVIVDLRTQVLDVPVQETITKDNVPVRVNAVVYFRVVDPVKAVTQVKNYIMATSQISQTT 119
+ VD+RT D+P QE +TKD+V + V+ VVY+RV + AV + N AT ++QTT
Sbjct: 91 FIKVDMRTISFDIPPQEVLTKDSVTISVDGVVYYRVQNATLAVANITNADSATRLLAQTT 150
Query: 120 LRSVIGQAHLDELLSERDKLNMQLQRIIDEATDPWGIKVTAVEIKDVELPAGMQRAMAKQ 179
LR+ +G +L ++LS+R+++ +Q +D+ATD WGIKV VEIKDV+LP +QRAMA +
Sbjct: 151 LRNALGTKNLSQILSDREEIAHHMQSTLDDATDDWGIKVERVEIKDVKLPVQLQRAMAAE 210
Query: 180 AEAERERRARITLAEAERQAAEKLREAAEIISEHPMALQLRTLQTISDVASDKSNVIVLM 239
AEA RE RA++ AE E A+ L+EA+ +I+E P ALQLR LQT++ +A++K++ IV
Sbjct: 211 AEAAREARAKVIAAEGEMNASRALKEASMVITESPAALQLRYLQTLTTIAAEKNSTIVFP 270
Query: 240 LPMEMLK 246
LP++ML+
Sbjct: 271 LPIDMLQ 277
>pir||T27365 hypothetical protein Y71H9A.2 - Caenorhabditis elegans
>gi|3881292|emb|CAA21750.1| (AL032659) predicted using
Genefinder~contains similarity to Pfam domain: PF01145
(SPFH domain / Band 7 family), Score=350.2,
E-value=7.4e-102, N=1 [Caenorhabditis elegans]
Length = 298
Score = 228 bits (574), Expect = 7e-59
Identities = 117/249 (46%), Positives = 171/249 (67%), Gaps = 4/249 (1%)
Query: 2 ILPTNFFVTTIILLFILIFLASAIKIVKEYERAVIFRLGRVV--GARGPGLFFIIPIFEK 59
IL ++ ++ L I +FL +K+ +EYERAVIFRLGRV GARGPGLFF++P +
Sbjct: 34 ILTIFSYILAVLTLPISVFLC--VKVAQEYERAVIFRLGRVKPGGARGPGLFFVVPCIDS 91
Query: 60 AVIVDLRTQVLDVPVQETITKDNVPVRVNAVVYFRVVDPVKAVTQVKNYIMATSQISQTT 119
+DLRT +VP QE ++KD V V V+AVV+FR+ + +V +++ +T ++QTT
Sbjct: 92 YKKIDLRTLSFEVPPQELLSKDAVTVAVDAVVFFRISNATISVINIEDAARSTKLLAQTT 151
Query: 120 LRSVIGQAHLDELLSERDKLNMQLQRIIDEATDPWGIKVTAVEIKDVELPAGMQRAMAKQ 179
LR+++G L E+LS+RD +++Q+Q +DE T PWG+KV VE+KDV LP +QR MA +
Sbjct: 152 LRNILGTKTLTEMLSDRDVISLQMQATLDETTIPWGVKVERVEMKDVRLPYQLQRVMAAE 211
Query: 180 AEAERERRARITLAEAERQAAEKLREAAEIISEHPMALQLRTLQTISDVASDKSNVIVLM 239
AEA R+ A+I AE E+ A+ L EAA++IS P A+QLR LQT++ ++S+K+N IV
Sbjct: 212 AEATRDAMAKIIAAEGEKNASTALAEAADVISMSPCAIQLRYLQTLNSISSEKNNTIVFP 271
Query: 240 LPMEMLKLF 248
PMEM+ F
Sbjct: 272 FPMEMMSRF 280
>emb|CAB76415.1| (Z66565) contains similarity to Pfam domain: PF01145 (SPFH domain /
Band 7 family), Score=369.9, E-value=8.6e-108, N=1~cDNA
EST yk67b6.5 comes from this gene~cDNA EST yk82a9.5
comes from this gene~cDNA EST yk392b12.3 comes from this
gene~cDNA EST yk440> >gi|7321105|emb|CAB82215.1|
(AL032659) contains similarity to Pfam domain: PF01145
(SPFH domain / Band 7 family), Score=369.9,
E-value=8.6e-108, N=1~cDNA EST yk67b6.5 comes from this
gene~cDNA EST yk82a9.5 comes from this gene~cDNA EST
yk392b12.3 comes from this gene~cDNA EST yk4>
Length = 281
Score = 228 bits (574), Expect = 7e-59
Identities = 118/243 (48%), Positives = 169/243 (68%), Gaps = 3/243 (1%)
Query: 9 VTTIILLFILIFLAS-AIKIVKEYERAVIFRLGRVV--GARGPGLFFIIPIFEKAVIVDL 65
++ +++LF L A +K+V+EYERAVIFRLGR+ GARGPG+FFIIP E +DL
Sbjct: 33 ISYLVVLFTLPLSAFFCLKVVQEYERAVIFRLGRLKHGGARGPGIFFIIPCIESFKKIDL 92
Query: 66 RTQVLDVPVQETITKDNVPVRVNAVVYFRVVDPVKAVTQVKNYIMATSQISQTTLRSVIG 125
R DVP QE ++KD+V V V+AV+YFR+ + +V V++ +T ++QTTLR+ +G
Sbjct: 93 RVVSFDVPPQEILSKDSVTVSVDAVIYFRISNATVSVINVEDAARSTKLLAQTTLRNFLG 152
Query: 126 QAHLDELLSERDKLNMQLQRIIDEATDPWGIKVTAVEIKDVELPAGMQRAMAKQAEAERE 185
L E+LS RD ++MQ+Q +DEATDPWG+KV VEIKDV LP +QRAMA +AEA R
Sbjct: 153 TRTLAEMLSSRDAISMQMQAALDEATDPWGVKVERVEIKDVRLPIQLQRAMAAEAEAARA 212
Query: 186 RRARITLAEAERQAAEKLREAAEIISEHPMALQLRTLQTISDVASDKSNVIVLMLPMEML 245
A+I AE E+ A+ L +AA++I+ P A+QLR LQT++ ++S+K+N I+ P E++
Sbjct: 213 AGAKIIAAEGEQLASRALADAADVIATSPCAIQLRYLQTLNSISSEKNNTIIFPFPTELI 272
Query: 246 KLF 248
F
Sbjct: 273 AKF 275
>emb|CAC12423.1| (AL445067) membrane protein 7, erythrocyte (human) related protein
[Thermoplasma acidophilum]
Length = 274
Score = 227 bits (573), Expect = 1e-58
Identities = 114/234 (48%), Positives = 168/234 (71%), Gaps = 3/234 (1%)
Query: 12 IILLFILIFLASAIKIVKEYERAVIFRLGRVVGARGPGLFFIIPIFEKAVIVDLRTQVLD 71
II++ LI L S I ++KE+ERA++ LGR G RGPG+ FI PI + + V R Q +
Sbjct: 10 IIIIIALIILLSGIHVLKEWERAIVLTLGRYGGIRGPGIIFITPIVSRGIYVSTRIQPVQ 69
Query: 72 VPVQETITKDNVPVRVNAVVYFRVVDPVKAVTQVKNYIMATSQISQTTLRSVIGQAHLDE 131
+ T TKDNVPV V+A++Y++V+DP KAV ++NY + T+ +QTTLR VIG++ DE
Sbjct: 70 FKTEATFTKDNVPVNVDAIMYYQVIDPQKAVLNIENYSVGTNYAAQTTLREVIGKSMFDE 129
Query: 132 LLSERDKLNMQLQRIIDEATDPWGIKVTAVEIKDVELPAGMQRAMAKQAEAERERRARIT 191
LLSER+K+ + IID+ T+ WG+KV +VEI+DV +P+ +Q AM++QA AERERR+R+T
Sbjct: 130 LLSEREKIGETAREIIDQKTEAWGVKVASVEIRDVLVPSQLQEAMSRQASAERERRSRVT 189
Query: 192 LAEAERQAAEKLREAAEIISEHPMALQLRTLQTISDVASD-KSNVIVLMLPMEM 244
LA+AE +AA+K+ EA+ E+P+ LQLR +Q I +V + KS++I M+P E+
Sbjct: 190 LAQAEVEAAQKMVEASRQYVENPIGLQLRWMQIIYEVGLEGKSSMI--MIPSEV 241
>gb|AAF48927.1| (AE003511) CG7633 gene product [Drosophila melanogaster]
Length = 339
Score = 225 bits (567), Expect = 5e-58
Identities = 121/224 (54%), Positives = 161/224 (71%), Gaps = 5/224 (2%)
Query: 2 ILPTNFFVTTIILLF-ILIFLASAIKIVKEYERAVIFRLGRVV--GARGPGLFFIIPIFE 58
IL T V ++L F I +F+ K+V EYERAVIFR+GR+ GARGPG+FF++P +
Sbjct: 6 ILATVVSVLIMVLTFPISVFIC--FKVVSEYERAVIFRMGRLRSGGARGPGVFFVLPCVD 63
Query: 59 KAVIVDLRTQVLDVPVQETITKDNVPVRVNAVVYFRVVDPVKAVTQVKNYIMATSQISQT 118
VDLRT DVP QE ++KD+V V V+AVVY+R+ DP+KAV QV NY +TS ++ T
Sbjct: 64 DYYPVDLRTVSFDVPPQEVLSKDSVTVTVDAVVYYRISDPLKAVIQVYNYSHSTSLLAAT 123
Query: 119 TLRSVIGQAHLDELLSERDKLNMQLQRIIDEATDPWGIKVTAVEIKDVELPAGMQRAMAK 178
TLR+V+G +L ELL+ER+ ++ +Q +DEATDPWG+KV VEIKDV LP +QRAMA
Sbjct: 124 TLRNVLGTRNLSELLTERETISHTMQMSLDEATDPWGVKVERVEIKDVSLPTALQRAMAA 183
Query: 179 QAEAERERRARITLAEAERQAAEKLREAAEIISEHPMALQLRTL 222
+AEA RE RA++ AE E +++ LREA+EIIS P ALQL+ L
Sbjct: 184 EAEAAREARAKVIAAEGEMKSSRALREASEIISASPSALQLQIL 227
>sp|Q19200|STO1_CAEEL STO-1 PROTEIN >gi|7447613|pir||T15971 hypothetical protein F08C6.4
- Caenorhabditis elegans >gi|868187|gb|AAA68723.1|
(U29378) similar to erythrocyte band 7 integral membrane
protein (SP:BAN7_HUMAN, P27105) [Caenorhabditis elegans]
Length = 281
Score = 217 bits (548), Expect = 8e-56
Identities = 111/234 (47%), Positives = 167/234 (70%), Gaps = 4/234 (1%)
Query: 16 FILIFLASAIKI---VKEYERAVIFRLGRVV-GARGPGLFFIIPIFEKAVIVDLRTQVLD 71
++LIFL + + +KEY+RAV+FRLGR+V +GPG+FFIIP + + +DLR +
Sbjct: 3 YVLIFLTFPVSVFMCIKEYQRAVVFRLGRLVPDVKGPGIFFIIPCIDTFLNIDLRVASYN 62
Query: 72 VPVQETITKDNVPVRVNAVVYFRVVDPVKAVTQVKNYIMATSQISQTTLRSVIGQAHLDE 131
VP QE +++D+V V V+AVVYF+V DP+ +V V N +T ++QTTLR+++G L E
Sbjct: 63 VPSQEILSRDSVTVSVDAVVYFKVFDPITSVVGVGNATDSTKLLAQTTLRTILGTHTLSE 122
Query: 132 LLSERDKLNMQLQRIIDEATDPWGIKVTAVEIKDVELPAGMQRAMAKQAEAERERRARIT 191
+LS+R+K++ ++ +DEAT+PWGIKV VE++DV LP+ MQRAMA +AEA R+ A+I
Sbjct: 123 ILSDREKISADMKISLDEATEPWGIKVERVELRDVRLPSQMQRAMAAEAEATRDAGAKII 182
Query: 192 LAEAERQAAEKLREAAEIISEHPMALQLRTLQTISDVASDKSNVIVLMLPMEML 245
AE E +A+ L EAA IIS+ A+QLR L T++ ++S+K++ I+ PME+L
Sbjct: 183 AAEGELRASAALAEAATIISKSEGAMQLRYLHTLNAISSEKTSTIIFPFPMEIL 236
>sp|Q21190|UNC1_CAEEL UNC-1 PROTEIN >gi|7494583|pir||T34324 erythrocyte band 7 intergral
membrane protein homolog unc-1 - Caenorhabditis elegans
>gi|1280125|gb|AAC69044.1| (U55375) Erythrocyte band 7
intergral membrane protein [Caenorhabditis elegans]
Length = 282
Score = 217 bits (548), Expect = 8e-56
Identities = 110/240 (45%), Positives = 164/240 (67%), Gaps = 5/240 (2%)
Query: 14 LLFILIF---LASAIKIVKEYERAVIFRLGRVV--GARGPGLFFIIPIFEKAVIVDLRTQ 68
+L I+ F + +K++KEYER VIFR+GR+V GARGPG+ FIIP + +DLR
Sbjct: 38 ILIIVTFPFSMCVCLKVIKEYERVVIFRIGRLVFGGARGPGMIFIIPCIDTYRKIDLRVV 97
Query: 69 VLDVPVQETITKDNVPVRVNAVVYFRVVDPVKAVTQVKNYIMATSQISQTTLRSVIGQAH 128
VP QE ++KD+V V V+AVVYFR DP+ +V V + I +T ++QTTLR+ +G
Sbjct: 98 SYAVPPQEILSKDSVTVSVDAVVYFRTSDPIASVNNVDDAIYSTKLLAQTTLRNALGMKT 157
Query: 129 LDELLSERDKLNMQLQRIIDEATDPWGIKVTAVEIKDVELPAGMQRAMAKQAEAERERRA 188
L E+L+ER+ + + I+DE T+ WG+KV VE+KD+ LP + RAMA +AEA RE RA
Sbjct: 158 LTEMLTEREAIAQLCETILDEGTEHWGVKVERVEVKDIRLPQQLTRAMAAEAEAAREARA 217
Query: 189 RITLAEAERQAAEKLREAAEIISEHPMALQLRTLQTISDVASDKSNVIVLMLPMEMLKLF 248
++ AE E++A+ L+EAA++I +P+ALQLR LQ ++ +A++ ++ IV +P+EM F
Sbjct: 218 KVVAAEGEQKASRALKEAADVIQANPVALQLRHLQALNSIAAEHNSTIVFPVPVEMFGAF 277
>sp|Q19958|STO2_CAEEL STO-2 PROTEIN >gi|7500297|pir||T16240 hypothetical protein F32A6.5
- Caenorhabditis elegans >gi|1065452|gb|AAA81390.1|
(U40409) similar C. elegans stomatin-like protein MEC-2,
Genbank accession # U26735, and to erythrocyte band 7
integral membrane protein SP:BAN7_HUMAN [Caenorhabditis
elegans]
Length = 280
Score = 216 bits (545), Expect = 2e-55
Identities = 109/210 (51%), Positives = 153/210 (71%), Gaps = 2/210 (0%)
Query: 25 IKIVKEYERAVIFRLGRVVG--ARGPGLFFIIPIFEKAVIVDLRTQVLDVPVQETITKDN 82
+K+V+EYERAVIFRLGR++G A+GPG+FF++P E VDLRT VP QE +TKD+
Sbjct: 59 MKVVQEYERAVIFRLGRLIGGGAKGPGIFFVLPCIESYTKVDLRTVSFSVPPQEILTKDS 118
Query: 83 VPVRVNAVVYFRVVDPVKAVTQVKNYIMATSQISQTTLRSVIGQAHLDELLSERDKLNMQ 142
V V+AV+Y+R+ + +V V+N +T ++QTTLR+++G L E+LS+R+ L
Sbjct: 119 VTTSVDAVIYYRISNATVSVANVENAHHSTRLLAQTTLRNMLGTRSLSEILSDRETLAAS 178
Query: 143 LQRIIDEATDPWGIKVTAVEIKDVELPAGMQRAMAKQAEAERERRARITLAEAERQAAEK 202
+Q I+DEAT+ WGIKV VEIKDV LP +QRAMA +AEA RE RA++ AE E++A+
Sbjct: 179 MQTILDEATESWGIKVERVEIKDVRLPIQLQRAMAAEAEATREARAKVIAAEGEQKASRA 238
Query: 203 LREAAEIISEHPMALQLRTLQTISDVASDK 232
LR+AA +I++ P ALQLR LQT++ VA +K
Sbjct: 239 LRDAASVIAQSPAALQLRYLQTLNSVAREK 268
>sp|Q22165|STO4_CAEEL STO-4 PROTEIN
Length = 213
Score = 206 bits (520), Expect = 2e-52
Identities = 106/205 (51%), Positives = 146/205 (70%), Gaps = 2/205 (0%)
Query: 26 KIVKEYERAVIFRLGRVV--GARGPGLFFIIPIFEKAVIVDLRTQVLDVPVQETITKDNV 83
++V+EYERAVIFRLGR+ GARGPG+FFIIP E +DLR DVP QE ++KD+V
Sbjct: 8 QVVQEYERAVIFRLGRLKHGGARGPGIFFIIPCIESFKKIDLRVVSFDVPPQEILSKDSV 67
Query: 84 PVRVNAVVYFRVVDPVKAVTQVKNYIMATSQISQTTLRSVIGQAHLDELLSERDKLNMQL 143
V V+AV+YFR+ + +V V++ +T ++QTTLR+ +G L E+LS RD ++MQ+
Sbjct: 68 TVSVDAVIYFRISNATVSVINVEDAARSTKLLAQTTLRNFLGTRTLAEMLSSRDAISMQM 127
Query: 144 QRIIDEATDPWGIKVTAVEIKDVELPAGMQRAMAKQAEAERERRARITLAEAERQAAEKL 203
Q +DEATDPWG+KV VEIKDV LP +QRAMA +AEA R A+I AE E+ A+ L
Sbjct: 128 QAALDEATDPWGVKVERVEIKDVRLPIQLQRAMAAEAEAARAAGAKIIAAEGEQLASRAL 187
Query: 204 REAAEIISEHPMALQLRTLQTISDV 228
+AA++I+ P A+QLR LQT++ +
Sbjct: 188 ADAADVIATSPCAIQLRYLQTLNSI 212
>gb|AAF54744.1| (AE003694) CG17424 gene product [Drosophila melanogaster]
Length = 474
Score = 205 bits (516), Expect = 5e-52
Identities = 102/253 (40%), Positives = 173/253 (68%), Gaps = 4/253 (1%)
Query: 8 FVTTIILLFILIF-LASAIKIVKEYERAVIFRLGRVVGARGPGLFFIIPIFEKAVIVDLR 66
FV+ I++L +L F L + I E+ R VIFRLGR+ GPGL F++P + VD+R
Sbjct: 34 FVSWILVLILLPFSLCCCLTIAYEFHRLVIFRLGRIRSCLGPGLVFLLPCIDSFNTVDIR 93
Query: 67 TQVLDVPVQETITKDNVPVRVNAVVYFRVVDPVKAVTQVKNYIMATSQISQTTLRSVIGQ 126
T V++V QE +TKD+V + VNAVV++ + DP+ ++ +V + AT +ISQ TLR+++G
Sbjct: 94 TDVVNVDPQEMLTKDSVSITVNAVVFYCIYDPINSIIKVDDARDATERISQVTLRNIVGS 153
Query: 127 AHLDELLSERDKLNMQLQRIIDEATDPWGIKVTAVEIKDVELPAGMQRAMAKQAEAERER 186
L ELL+ R +L++++Q+ + + T+ WG++V V++ ++ LP+ ++R++A +AEA RE
Sbjct: 154 KGLHELLASRQQLSLEIQQAVAKITERWGVRVERVDLMEISLPSSLERSLASEAEATREA 213
Query: 187 RARITLAEAERQAAEKLREAAEIISEHPMALQLRTLQTISDVASDKSNVIVLMLPMEMLK 246
RA+I LAE E +A++ L+E ++++SE+ + LQLR LQ + +AS++ ++ +P+E++
Sbjct: 214 RAKIILAEGEAKASKALKECSDVMSENQITLQLRHLQILCSMASERRVNVLFPIPLEIMA 273
Query: 247 LF---KSLSDAAQ 256
F K SDAAQ
Sbjct: 274 PFMDGKDSSDAAQ 286
>gb|AAB18857.1| (U50999) stomatin [Mus musculus]
Length = 259
Score = 194 bits (488), Expect = 9e-49
Identities = 105/229 (45%), Positives = 155/229 (66%), Gaps = 13/229 (5%)
Query: 20 FLASAIKIVKEYERAVIFRLGRVV--GARGPGLFFIIPIFEKAVIVDLRTQVLDVPVQET 77
+L + IVKEYER +IFRLGR++ GA+GPG+ F+ +A+ R VL
Sbjct: 35 WLPRSFSIVKEYERVIIFRLGRILQGGAKGPGVCFLSC---RALTASSRWTVL------- 84
Query: 78 ITKDNVPVRVNAVVYFRVVDPVKAVTQVKNYIMATSQISQTTLRSVIGQAHLDELLSERD 137
TKD+V + V+ VVY+RV + AV + N AT ++QTTLR+ +G +L ++LS+R+
Sbjct: 85 -TKDSVTISVDGVVYYRVQNATLAVANITNADSATRLLAQTTLRNALGTKNLSQILSDRE 143
Query: 138 KLNMQLQRIIDEATDPWGIKVTAVEIKDVELPAGMQRAMAKQAEAERERRARITLAEAER 197
++ +Q +D+ATD WGIKV VEIKDV+LP +QRAMA +AEA RE RA++ AE E
Sbjct: 144 EIAHHMQSTLDDATDDWGIKVERVEIKDVKLPVQLQRAMAAEAEAAREARAKVIAAEGEM 203
Query: 198 QAAEKLREAAEIISEHPMALQLRTLQTISDVASDKSNVIVLMLPMEMLK 246
A+ L+EA+ +I+E P ALQLR LQT++ +A++K++ IV LP++ML+
Sbjct: 204 NASRALKEASMVITESPAALQLRYLQTLTTIAAEKNSTIVFPLPVDMLQ 252
>pir||E72322 conserved hypothetical protein - Thermotoga maritima (strain MSB8)
>gi|4981401|gb|AAD35948.1|AE001753_4 (AE001753)
conserved hypothetical protein [Thermotoga maritima]
Length = 305
Score = 193 bits (486), Expect = 2e-48
Identities = 106/301 (35%), Positives = 177/301 (58%), Gaps = 46/301 (15%)
Query: 12 IILLFILIFLASAIKIVKEYERAVIFRLGRVVGARGPGLFFIIPIFEKAVIVDLRTQVLD 71
+++ F+++ AS+I+IV+ YER ++ RLG+ G G+ FIIP FE+ + VD+R +V+D
Sbjct: 7 VLVFFLIVLAASSIRIVRPYERGLVERLGKFKREVGAGVHFIIPFFERMIKVDMREKVID 66
Query: 72 VPVQETITKDNVPVRVNAVVYFRVVDPVKAVTQVKNYIMATSQISQTTLRSVIGQAHLDE 131
VP QE IT+DNV V V+AV+Y+ + D + V V N+ MAT +++QT LR+VIG+ LD+
Sbjct: 67 VPPQEVITRDNVVVTVDAVIYYEITDAYRVVYNVSNFEMATIKLAQTNLRNVIGELELDQ 126
Query: 132 LLSERDKLNMQLQRIIDEATDPWGIKVTAVEIKDVELPAGMQRAMAKQAEAERERRARIT 191
L+ R+++NM+L+ ++DEATD WG+++T VEIK ++ P + AM+KQ +AER +RA I
Sbjct: 127 TLTSRERINMKLRTVLDEATDKWGVRITRVEIKKIDPPQDITDAMSKQMKAERTKRAAIL 186
Query: 192 LAEAERQA---------------AEKLREAAEIISEHPM--------------------- 215
AE +QA AE EA + ++E M
Sbjct: 187 EAEGYKQAEILKAEGQKNAAILRAEGEAEAIKRVAEANMQKLILEARGQAEAIKLVFNAI 246
Query: 216 --------ALQLRTLQTISDVASDKSNVIVLMLPMEMLKLFKSLSDAAQVYAKKEKEKEK 267
L +R L+T+ ++A+ ++ I LP E + SL ++++ K+E ++++
Sbjct: 247 HEGNPTKDLLTVRYLETLKEMANGQATKI--FLPFEASSILASLGAISEIFKKEENKRDE 304
Query: 268 E 268
+
Sbjct: 305 K 305
>pir||A71159 probable membrane protein - Pyrococcus horikoshii
>gi|3256875|dbj|BAA29558.1| (AP000002) 298aa long
hypothetical membrane protein [Pyrococcus horikoshii]
Length = 298
Score = 193 bits (485), Expect = 2e-48
Identities = 96/195 (49%), Positives = 141/195 (72%), Gaps = 2/195 (1%)
Query: 12 IILLFILIFLASAIKIVKEYERAVIFRLGRVVGARGPGLFFIIPIFEKAVIVDLRTQVLD 71
I+ LF+LI L ++K+++ Y++ ++ RLG+ PG+ FIIP E+ IVDLR V+D
Sbjct: 15 ILGLFLLIMLLLSVKVIRPYQKGLVERLGKFNRLLDPGIHFIIPFMERVKIVDLREHVID 74
Query: 72 VPVQETITKDNVPVRVNAVVYFRVVDPVKAVTQVKNYIMATSQISQTTLRSVIGQAHLDE 131
VP QE I KDNV V V+AVVY++V+DPVKAV V +++MA +++QT LR++IG+ LDE
Sbjct: 75 VPPQEVICKDNVVVTVDAVVYYQVIDPVKAVYNVSDFLMAIVKLAQTNLRAIIGEMELDE 134
Query: 132 LLSERDKLNMQLQRIIDEATDPWGIKVTAVEIKDVELPAGMQRAMAKQAEAERERRARIT 191
LS RD +N +L+ +D+ TD WG+K+T VEI+ ++ P +Q AMAKQ AERE+RA I
Sbjct: 135 TLSGRDIINARLREELDKITDRWGVKITRVEIQRIDPPKDIQEAMAKQMTAEREKRAMIL 194
Query: 192 LAEAERQAAEKLREA 206
+AE +++AA +REA
Sbjct: 195 IAEGKKEAA--IREA 207
>sp|Q20657|STO3_CAEEL STO-3 PROTEIN >gi|7503947|pir||T22502 hypothetical protein F52D10.5
- Caenorhabditis elegans >gi|3877420|emb|CAA91476.1|
(Z66564) contains similarity to Pfam domain: PF01145
(SPFH domain / Band 7 family), Score=393.1,
E-value=8.8e-115, N=1 [Caenorhabditis elegans]
Length = 267
Score = 192 bits (484), Expect = 3e-48
Identities = 100/236 (42%), Positives = 156/236 (65%), Gaps = 2/236 (0%)
Query: 13 ILLFILIFLASAIKIVKEYERAVIFRLGRVV--GARGPGLFFIIPIFEKAVIVDLRTQVL 70
+LL + + +KIVKEY+R VIFRLGR+ RGPG+ ++P + VDLR
Sbjct: 27 LLLTFPVSIFFCVKIVKEYDRMVIFRLGRLWQDNPRGPGIVLVLPFIDSHKTVDLRVMSY 86
Query: 71 DVPVQETITKDNVPVRVNAVVYFRVVDPVKAVTQVKNYIMATSQISQTTLRSVIGQAHLD 130
DVP QE +T+D+V + V+A VY+R DP+ ++ +V + M+T Q++Q++LR+V+G L
Sbjct: 87 DVPTQEMLTRDSVTIGVDAAVYYRTSDPIASLARVNDAHMSTRQLAQSSLRNVLGTRSLA 146
Query: 131 ELLSERDKLNMQLQRIIDEATDPWGIKVTAVEIKDVELPAGMQRAMAKQAEAERERRARI 190
EL+++R + +Q++ I+D AT WGI V VEIKD+ LP M RAMA +AEA+RE A++
Sbjct: 147 ELMTDRHGIAVQVKYILDSATLFWGIHVERVEIKDIRLPREMCRAMAAEAEAQRESDAKV 206
Query: 191 TLAEAERQAAEKLREAAEIISEHPMALQLRTLQTISDVASDKSNVIVLMLPMEMLK 246
A+ E A+ ++AA+ ++ P ALQLR LQT+ +++ ++ IV+ PME +K
Sbjct: 207 VTAQGELDASMAFQKAADELAGSPTALQLRYLQTLVKISAHDNHTIVVPFPMEYIK 262
>pir||F75003 stomatin-like protein PAB1324 - Pyrococcus abyssi (strain Orsay)
>gi|5458982|emb|CAB50468.1| (AJ248288) STOMATIN-LIKE
PROTEIN [Pyrococcus abyssi]
Length = 299
Score = 191 bits (480), Expect = 8e-48
Identities = 96/199 (48%), Positives = 143/199 (71%), Gaps = 3/199 (1%)
Query: 9 VTTIIL-LFILIFLASAIKIVKEYERAVIFRLGRVVGARGPGLFFIIPIFEKAVIVDLRT 67
V IIL +F+LI L ++K+++ Y++ ++ RLG+ PG+ FIIP E+ +VDLR
Sbjct: 8 VALIILGIFLLIMLLLSVKVIRPYQKGLVERLGKFNRLLDPGIHFIIPFMERVKVVDLRE 67
Query: 68 QVLDVPVQETITKDNVPVRVNAVVYFRVVDPVKAVTQVKNYIMATSQISQTTLRSVIGQA 127
V+DVP QE I KDNV V V+AVVY++++DPVKAV V +++MA +++QT LR++IG+
Sbjct: 68 HVIDVPPQEVICKDNVVVTVDAVVYYQILDPVKAVYNVSDFLMAIVKLAQTNLRAIIGEM 127
Query: 128 HLDELLSERDKLNMQLQRIIDEATDPWGIKVTAVEIKDVELPAGMQRAMAKQAEAERERR 187
LDE LS RD +N +L+ +D+ TD WG+K+T VEI+ ++ P +Q AMAKQ AERE+R
Sbjct: 128 ELDETLSGRDIINAKLREELDKITDRWGVKITRVEIQRIDPPKDIQEAMAKQMTAEREKR 187
Query: 188 ARITLAEAERQAAEKLREA 206
A I +AE +++AA +REA
Sbjct: 188 AMILIAEGKKEAA--IREA 204
>gi|7657615 podocin [Homo sapiens] >gi|7363002|emb|CAB83216.1| (AJ279254)
podocin [Homo sapiens] >gi|7363472|emb|CAB83272.1|
(AJ279246) podocin [Homo sapiens]
Length = 383
Score = 188 bits (472), Expect = 7e-47
Identities = 100/256 (39%), Positives = 159/256 (62%), Gaps = 6/256 (2%)
Query: 7 FFVTTIILLFILIFLASAI----KIVKEYERAVIFRLGRVVG--ARGPGLFFIIPIFEKA 60
+ + I LLFI++ +I K+V+EYER +IFRLG ++ A+GPGLFF +P +
Sbjct: 103 WLLVLISLLFIIMTFPFSIWFCVKVVQEYERVIIFRLGHLLPGRAKGPGLFFFLPCLDTY 162
Query: 61 VIVDLRTQVLDVPVQETITKDNVPVRVNAVVYFRVVDPVKAVTQVKNYIMATSQISQTTL 120
VDLR Q L++P E +TKD + ++A+ Y+R+ + ++ + + A + QTT+
Sbjct: 163 HKVDLRLQTLEIPFHEIVTKDMFIMEIDAICYYRMENASLLLSSLAHVSKAVQFLVQTTM 222
Query: 121 RSVIGQAHLDELLSERDKLNMQLQRIIDEATDPWGIKVTAVEIKDVELPAGMQRAMAKQA 180
+ ++ L E+L ER + + +D T WGIKV +EIKDV LPAG+Q ++A +A
Sbjct: 223 KRLLAHRSLTEILLERKSIAQDAKVALDSVTCIWGIKVERIEIKDVRLPAGLQHSLAVEA 282
Query: 181 EAERERRARITLAEAERQAAEKLREAAEIISEHPMALQLRTLQTISDVASDKSNVIVLML 240
EA+R+ + R+ AEAE+ A+E LR AAEI+S P A+QLR L T+ ++++K + +VL L
Sbjct: 283 EAQRQAKVRMIAAEAEKAASESLRMAAEILSGTPAAVQLRYLHTLQSLSTEKPSTVVLPL 342
Query: 241 PMEMLKLFKSLSDAAQ 256
P ++L S S+ Q
Sbjct: 343 PFDLLNCLSSPSNRTQ 358
>gb|AAF54746.1| (AE003694) CG14736 gene product [Drosophila melanogaster]
Length = 368
Score = 184 bits (463), Expect = 8e-46
Identities = 91/217 (41%), Positives = 150/217 (68%), Gaps = 1/217 (0%)
Query: 35 VIFRLGRV-VGARGPGLFFIIPIFEKAVIVDLRTQVLDVPVQETITKDNVPVRVNAVVYF 93
+I RLGR+ G RGPGL FI+P ++ VD+RT V +V Q+ +TKD+V + VNAVVY+
Sbjct: 2 IILRLGRLRKGLRGPGLVFILPCIDETHRVDMRTDVTNVRPQDVLTKDSVTITVNAVVYY 61
Query: 94 RVVDPVKAVTQVKNYIMATSQISQTTLRSVIGQAHLDELLSERDKLNMQLQRIIDEATDP 153
+ P+ ++ QV + AT ISQ TLR+++G L+ LL+ R +L+ ++Q+ + T
Sbjct: 62 CIYSPIDSIIQVDDAKQATQLISQVTLRNIVGSKTLNVLLTSRQQLSREIQQAVAGITYR 121
Query: 154 WGIKVTAVEIKDVELPAGMQRAMAKQAEAERERRARITLAEAERQAAEKLREAAEIISEH 213
WG++V V++ D+ LP ++R++A +AEA RE RA+I LAE E +A++ L+EA++++SE+
Sbjct: 122 WGVRVERVDVMDITLPTSLERSLASEAEAVREARAKIILAEGELKASKALKEASDVMSEN 181
Query: 214 PMALQLRTLQTISDVASDKSNVIVLMLPMEMLKLFKS 250
+ LQLR LQ +S +AS++ I+ +P+E+++ F S
Sbjct: 182 KITLQLRHLQILSSIASERRVRIIYPIPLEIMEPFMS 218
>sp|Q58237|Y827_METJA HYPOTHETICAL PROTEIN MJ0827 >gi|2129105|pir||C64403 membrane
protein homolog - Methanococcus jannaschii
>gi|1591514|gb|AAB98826.1| (U67526) membrane protein,
putative regulator of cation conductance [Methanococcus
jannaschii]
Length = 199
Score = 180 bits (453), Expect = 1e-44
Identities = 90/191 (47%), Positives = 134/191 (70%), Gaps = 3/191 (1%)
Query: 7 FFVTTIILLFILIFLASAIKIVKEYERAVIFRLGRVVGARGPGLFFIIPIFEKAVIVDLR 66
+ + II LFI++ AI IV +YE +IFRLGRV+G PG+ IIP + V VD+R
Sbjct: 10 WLILGIIALFIIV---KAIVIVNQYEGGLIFRLGRVIGKLKPGINIIIPFLDVPVKVDMR 66
Query: 67 TQVLDVPVQETITKDNVPVRVNAVVYFRVVDPVKAVTQVKNYIMATSQISQTTLRSVIGQ 126
T+V D+P QE ITKDN V+V+AVVY+RV+D KA+ +V++Y A ++QTTLR++IG
Sbjct: 67 TRVTDIPPQEMITKDNAVVKVDAVVYYRVIDVEKAILEVEDYEYAIINLAQTTLRAIIGS 126
Query: 127 AHLDELLSERDKLNMQLQRIIDEATDPWGIKVTAVEIKDVELPAGMQRAMAKQAEAERER 186
LDE+L++R+ +N +L I+D TD WG+++ VE+K+++ P ++ AMA+Q +AER +
Sbjct: 127 MELDEVLNKREYINSKLLEILDRETDAWGVRIEKVEVKEIDPPEDIKNAMAQQMKAERLK 186
Query: 187 RARITLAEAER 197
RA I AE E+
Sbjct: 187 RAAILEAEGEK 197
>gb|AAF52157.1| (AE003607) CG14644 gene product [Drosophila melanogaster]
Length = 225
Score = 180 bits (452), Expect = 1e-44
Identities = 89/221 (40%), Positives = 148/221 (66%), Gaps = 2/221 (0%)
Query: 28 VKEYERAVIFRLGRV--VGARGPGLFFIIPIFEKAVIVDLRTQVLDVPVQETITKDNVPV 85
+ EYERAVI RLGR+ RGPG+ F++P + +VD+RT+ D+ QE +T+D V +
Sbjct: 1 MSEYERAVILRLGRLRPKPPRGPGVIFLVPCIDDLAVVDIRTRSFDLHRQEILTRDMVTI 60
Query: 86 RVNAVVYFRVVDPVKAVTQVKNYIMATSQISQTTLRSVIGQAHLDELLSERDKLNMQLQR 145
++ VVY+ + P A+ QV + AT +++ TTLR+V G L +LLS ++ L+ Q++
Sbjct: 61 SIDGVVYYSIKSPFDAMLQVYDPEEATEKLAMTTLRNVAGTHKLMDLLSSKEYLSNQIEG 120
Query: 146 IIDEATDPWGIKVTAVEIKDVELPAGMQRAMAKQAEAERERRARITLAEAERQAAEKLRE 205
I+ +T+PWGI+V VEIK++ +P ++RA+A + EA RE +A++ A+ ER A L+E
Sbjct: 121 ILYNSTEPWGIRVERVEIKEIFMPDQLKRALAVEQEAMREAKAKVAAAQGERDAVTALKE 180
Query: 206 AAEIISEHPMALQLRTLQTISDVASDKSNVIVLMLPMEMLK 246
AA+I+ +P+ALQLR LQT++ + +D + V P+++++
Sbjct: 181 AADIMETNPIALQLRYLQTLNSICNDDTRSYVFPFPVDIVR 221
>sp|O26788|Y692_METTH HYPOTHETICAL PROTEIN MTH692 >gi|7447611|pir||C69192 stomatin-like
protein - Methanobacterium thermoautotrophicum (strain
Delta H) >gi|2621777|gb|AAB85197.1| (AE000848)
stomatin-like protein [Methanobacterium
thermoautotrophicum]
Length = 318
Score = 165 bits (414), Expect = 4e-40
Identities = 85/194 (43%), Positives = 125/194 (63%)
Query: 12 IILLFILIFLASAIKIVKEYERAVIFRLGRVVGARGPGLFFIIPIFEKAVIVDLRTQVLD 71
II+L +L+ ++KI++ YE+ V+ RLG+ GL IIP E VD+R QV+D
Sbjct: 6 IIVLVLLVLAFKSLKILRPYEKGVVERLGKYQRTVESGLVVIIPFIEAIKKVDMREQVVD 65
Query: 72 VPVQETITKDNVPVRVNAVVYFRVVDPVKAVTQVKNYIMATSQISQTTLRSVIGQAHLDE 131
VP QE ITKDN V V+ V+++ VVDP AV V ++ A ++++QT LR++IG LD+
Sbjct: 66 VPPQEVITKDNTVVVVDCVIFYEVVDPFNAVYNVVDFYQAITKLAQTNLRNIIGDLELDQ 125
Query: 132 LLSERDKLNMQLQRIIDEATDPWGIKVTAVEIKDVELPAGMQRAMAKQAEAERERRARIT 191
L+ R+ +N QL+ ++DEATD WG +V VEI+ +E P + AM+KQ +AER +RA I
Sbjct: 126 TLTSREMINTQLREVLDEATDKWGTRVVRVEIQRIEPPGDIVEAMSKQMKAERMKRAAIL 185
Query: 192 LAEAERQAAEKLRE 205
AE +Q+ K E
Sbjct: 186 EAEGYKQSEIKRAE 199
>gb|AAG18899.1| (AE004992) bifunctional short chain isoprenyl diphosphate synthase;
Ids [Halobacterium sp. NRC-1]
Length = 392
Score = 158 bits (395), Expect = 7e-38
Identities = 85/205 (41%), Positives = 126/205 (61%), Gaps = 7/205 (3%)
Query: 3 LPTNFF---VTTIILLFILIFLA----SAIKIVKEYERAVIFRLGRVVGARGPGLFFIIP 55
LP F +TT++ L +L+ LA ++IV YE+ + G G PG+ I P
Sbjct: 18 LPAAIFGGSLTTVVGLLLLVLLAVVVYETVQIVDAYEKQALTVFGEYRGLLEPGINVIPP 77
Query: 56 IFEKAVIVDLRTQVLDVPVQETITKDNVPVRVNAVVYFRVVDPVKAVTQVKNYIMATSQI 115
+ D+RTQ +DVP QE IT+DN PV +AVVY RV D +A +V +Y A S +
Sbjct: 78 FVSRTYTFDMRTQTIDVPRQEAITRDNSPVTADAVVYIRVRDAKRAFLEVDDYKTAVSNL 137
Query: 116 SQTTLRSVIGQAHLDELLSERDKLNMQLQRIIDEATDPWGIKVTAVEIKDVELPAGMQRA 175
+QTTLR+V+G LD+ L++R ++N +++ +DE TD WGI+V +VE+++V +Q+A
Sbjct: 138 AQTTLRAVLGDMELDDTLNKRQEINSRIRTELDEPTDEWGIRVESVEVREVNPSQEVQQA 197
Query: 176 MAKQAEAERERRARITLAEAERQAA 200
M +Q AER RRA I A+ ERQ+A
Sbjct: 198 MEQQTSAERRRRAMILEAQGERQSA 222
>gi|10955528 77 pct identical to sp:YBBK_ECOLI[hypothetical 33kd protein of E.
coli] [Escherichia coli] >gi|9971722|dbj|BAB12673.1|
(AP002527) 77 pct identical to
sp:YBBK_ECOLI[hypothetical 33kd protein of E. coli]
[Escherichia coli]
Length = 325
Score = 157 bits (394), Expect = 9e-38
Identities = 80/189 (42%), Positives = 122/189 (64%), Gaps = 1/189 (0%)
Query: 12 IILLFILIFLASAIKIVKEYERAVIFRLGRVVGARGPGLFFIIPIFEK-AVIVDLRTQVL 70
+++L LIF+ SA+KIV + + R G+ PGL F+IP ++ +++ VL
Sbjct: 17 LLILVALIFVKSAVKIVPQGNAWTVERFGKYTHTLSPGLHFLIPFMDRIGQRINMMETVL 76
Query: 71 DVPVQETITKDNVPVRVNAVVYFRVVDPVKAVTQVKNYIMATSQISQTTLRSVIGQAHLD 130
DVP QE I+KDN V ++AV + +V+D KA +V N A S + T +R+V+G +LD
Sbjct: 77 DVPKQEVISKDNANVTIDAVCFIQVIDAAKAAYEVDNLASAISNLVMTNIRTVVGGMNLD 136
Query: 131 ELLSERDKLNMQLQRIIDEATDPWGIKVTAVEIKDVELPAGMQRAMAKQAEAERERRARI 190
++LS+RD +N +L ++D ATDPWGIKVT +EI+DV+ P + +AM Q +AER +RA+I
Sbjct: 137 DMLSQRDSINSKLLTVVDYATDPWGIKVTRIEIRDVKPPEELTKAMNAQMKAERTKRAQI 196
Query: 191 TLAEAERQA 199
AE RQ+
Sbjct: 197 LEAEGIRQS 205
>pir||D75311 conserved hypothetical protein - Deinococcus radiodurans (strain
R1) >gi|6459936|gb|AAF11687.1|AE002048_7 (AE002048)
conserved hypothetical protein [Deinococcus radiodurans]
Length = 344
Score = 157 bits (393), Expect = 1e-37
Identities = 88/194 (45%), Positives = 123/194 (63%), Gaps = 2/194 (1%)
Query: 8 FVTTIILLFILIFLASAIKIVKEYERAVIFRLGRVVGARGPGLFFIIPIFEK-AVIVDLR 66
FV ++LL I+ LA IK V + R G+ PGL IIP ++ V++
Sbjct: 6 FVVVLVLLVIITLLAG-IKSVPQGNEWTQERFGKFQRTLKPGLNLIIPYIDRIGRKVNMM 64
Query: 67 TQVLDVPVQETITKDNVPVRVNAVVYFRVVDPVKAVTQVKNYIMATSQISQTTLRSVIGQ 126
QV DVP QE ITKDN V V+AVV+++V+D KA +V+N A ++ T +R+V G
Sbjct: 65 EQVFDVPSQEIITKDNALVTVDAVVFYQVLDAAKASYEVRNLEQAVLNLTMTNIRTVTGS 124
Query: 127 AHLDELLSERDKLNMQLQRIIDEATDPWGIKVTAVEIKDVELPAGMQRAMAKQAEAERER 186
LDELLS RD +N +L ++DEAT+PWG+KVT +E+KD++ PA + +MA+Q +AERE+
Sbjct: 125 MDLDELLSNRDTINAKLLVVVDEATEPWGVKVTRIEVKDIKPPADLVASMARQMKAEREK 184
Query: 187 RARITLAEAERQAA 200
RA I AE RQAA
Sbjct: 185 RANILDAEGFRQAA 198
>pir||F82256 conserved hypothetical protein VC0976 [imported] - Vibrio cholerae
(group O1 strain N16961) >gi|9655437|gb|AAF94138.1|
(AE004179) conserved hypothetical protein [Vibrio
cholerae]
Length = 306
Score = 155 bits (387), Expect = 6e-37
Identities = 79/189 (41%), Positives = 119/189 (62%), Gaps = 1/189 (0%)
Query: 12 IILLFILIFLASAIKIVKEYERAVIFRLGRVVGARGPGLFFIIPIFEKAVI-VDLRTQVL 70
+++L ++IF++SA+K V + + R GR PGL IIP ++ +++ QVL
Sbjct: 11 VLVLAVVIFISSAVKTVPQGNNWTVERFGRYTQTLKPGLNLIIPFIDRVGHKINMMEQVL 70
Query: 71 DVPVQETITKDNVPVRVNAVVYFRVVDPVKAVTQVKNYIMATSQISQTTLRSVIGQAHLD 130
D+P QE I+KDN V ++AV + +V+D KA +V A ++ T +R+V+G LD
Sbjct: 71 DIPAQEVISKDNANVVIDAVCFVQVIDAAKAAYEVSQLQHAIRNLTLTNMRTVLGSMELD 130
Query: 131 ELLSERDKLNMQLQRIIDEATDPWGIKVTAVEIKDVELPAGMQRAMAKQAEAERERRARI 190
E+LS+RD +N +L I+D AT PWG+KVT +EIKDV+ PA + AM Q +AER +RA +
Sbjct: 131 EMLSQRDMINTKLLSIVDHATSPWGVKVTRIEIKDVQPPADLTAAMNAQMKAERNKRAEV 190
Query: 191 TLAEAERQA 199
AE RQA
Sbjct: 191 LEAEGVRQA 199
>sp|P71768|YE88_MYCTU HYPOTHETICAL 41.2 KDA PROTEIN RV1488 >gi|7476783|pir||C70711
hypothetical protein Rv1488 - Mycobacterium tuberculosis
(strain H37RV) >gi|1524234|emb|CAB02038.1| (Z79701)
hypothetical protein Rv1488 [Mycobacterium tuberculosis]
Length = 381
Score = 154 bits (385), Expect = 1e-36
Identities = 76/195 (38%), Positives = 126/195 (63%), Gaps = 1/195 (0%)
Query: 12 IILLFILIFLASAIKIVKEYERAVIFRLGRVVGARGPGLFFIIPIFEKA-VIVDLRTQVL 70
++++F +I +A ++ ++ + E AVI RLGR L ++P ++ VDLR +V+
Sbjct: 13 VLVIFAIIVVAKSVALIPQAEAAVIERLGRYSRTVSGQLTLLVPFIDRVRARVDLRERVV 72
Query: 71 DVPVQETITKDNVPVRVNAVVYFRVVDPVKAVTQVKNYIMATSQISQTTLRSVIGQAHLD 130
P Q IT+DN+ + ++ VVYF+V P AV ++ NYI+ Q++ TTLR+V+G L+
Sbjct: 73 SFPPQPVITEDNLTLNIDTVVYFQVTVPQAAVYEISNYIVGVEQLTTTTLRNVVGGMTLE 132
Query: 131 ELLSERDKLNMQLQRIIDEATDPWGIKVTAVEIKDVELPAGMQRAMAKQAEAERERRARI 190
+ L+ RD++N QL+ ++DEAT WG++V VE++ ++ P +Q +M KQ +A+RE+RA I
Sbjct: 133 QTLTSRDQINAQLRGVLDEATGRWGLRVARVELRSIDPPPSIQASMEKQMKADREKRAMI 192
Query: 191 TLAEAERQAAEKLRE 205
AE R+AA K E
Sbjct: 193 LTAEGTREAAIKQAE 207
>sp|P77367|YBBK_ECOLI HYPOTHETICAL 33.7 KD PROTEIN IN USHA-TESA INTERGENIC REGION
>gi|7447609|pir||H64779 probable membrane protein ybbK -
Escherichia coli >gi|1773171|gb|AAB40243.1| (U82664)
similar to M. tuberculosis MTCY277.09 [Escherichia coli]
>gi|1786697|gb|AAC73591.1| (AE000155) putative protease
[Escherichia coli K12]
Length = 305
Score = 152 bits (380), Expect = 4e-36
Identities = 79/189 (41%), Positives = 122/189 (63%), Gaps = 2/189 (1%)
Query: 13 ILLFI-LIFLASAIKIVKEYERAVIFRLGRVVGARGPGLFFIIPIFEK-AVIVDLRTQVL 70
IL+F+ L+ + + +KIV + + + R GR PGL ++P ++ +++ QVL
Sbjct: 7 ILIFVALVIVGAGVKIVPQGYQWTVERFGRYTKTLQPGLSLVVPFMDRIGRKINMMEQVL 66
Query: 71 DVPVQETITKDNVPVRVNAVVYFRVVDPVKAVTQVKNYIMATSQISQTTLRSVIGQAHLD 130
D+P QE I+KDN V ++AV + +V+D +A +V N +A ++ T +R+V+G LD
Sbjct: 67 DIPSQEVISKDNANVTIDAVCFIQVIDAPRAAYEVSNLELAIINLTMTNIRTVLGSMELD 126
Query: 131 ELLSERDKLNMQLQRIIDEATDPWGIKVTAVEIKDVELPAGMQRAMAKQAEAERERRARI 190
E+LS+RD +N +L RI+DEAT+PWGIKVT +EI+DV PA + +M Q +AER +RA I
Sbjct: 127 EMLSQRDSINSRLLRIVDEATNPWGIKVTRIEIRDVRPPAELISSMNAQMKAERTKRAYI 186
Query: 191 TLAEAERQA 199
AE RQA
Sbjct: 187 LEAEGIRQA 195
>gb|AAF09169.1|AF065260_1 (AF065260) HflC homolog [Clostridium difficile]
Length = 320
Score = 151 bits (378), Expect = 7e-36
Identities = 79/194 (40%), Positives = 124/194 (63%), Gaps = 2/194 (1%)
Query: 9 VTTIILLFILIFLA-SAIKIVKEYERAVIFRLGRVVGARGPGLFFIIPIFEK-AVIVDLR 66
V +I+L+ +++ ++ + I+++K+ + +I RLG+ G+ F+IP +K A ++DLR
Sbjct: 6 VLSIVLIVVVVAISLTCIRVIKQSKVGIIMRLGKFQKVAETGVHFLIPFLDKMAYVIDLR 65
Query: 67 TQVLDVPVQETITKDNVPVRVNAVVYFRVVDPVKAVTQVKNYIMATSQISQTTLRSVIGQ 126
V+D P Q ITKDNV ++++ VVY++V DPV+ V ++ N I A ++ TTLR++IG+
Sbjct: 66 EIVIDFPPQPVITKDNVTMQIDTVVYYKVTDPVRYVFEIANPIAAIENLTATTLRNIIGE 125
Query: 127 AHLDELLSERDKLNMQLQRIIDEATDPWGIKVTAVEIKDVELPAGMQRAMAKQAEAERER 186
LDE L+ + + + DEATD WGIKV VE+K++ P +Q AM KQ AERER
Sbjct: 126 LDLDETLTSQRYNKCKNENYPDEATDKWGIKVNRVELKNIMPPQDIQVAMEKQMRAERER 185
Query: 187 RARITLAEAERQAA 200
R I AE + AA
Sbjct: 186 REAILQAEGNKSAA 199
>emb|CAB94650.1| (AL359215) putative secreted protein. [Streptomyces coelicolor
A3(2)]
Length = 343
Score = 149 bits (373), Expect = 3e-35
Identities = 80/212 (37%), Positives = 131/212 (61%), Gaps = 6/212 (2%)
Query: 7 FFVTTIILLFILIF-LASAIKIVKEYERAVIFRLGRVVGARGPGLFFIIPIFEKAV-IVD 64
F + +I+ + +F + A++IV + + RLGR PGL +IP ++ ++D
Sbjct: 8 FLIAGVIVALLAVFTVVRAVRIVPQARARNVERLGRYHRTLKPGLSVVIPYIDRVYPVID 67
Query: 65 LRTQVLDVPVQETITKDNVPVRVNAVVYFRVVDPVKAVTQVKNYIMATSQISQTTLRSVI 124
LR QV+ Q IT+DN+ V ++ V+YF+V DP A ++ N++ A Q++ TTLR+V+
Sbjct: 68 LREQVVSFKPQPVITEDNLVVEIDTVLYFQVTDPRAAFYEIANFLQAVEQLTVTTLRNVV 127
Query: 125 GQAHLDELLSERDKLNMQLQRIIDEATDPWGIKVTAVEIKDVELPAGMQRAMAKQAEAER 184
G L++ L+ RD +N QL+ ++DEAT WG++V VEIK ++ P ++ AM KQ AER
Sbjct: 128 GSMDLEKTLTSRDTINSQLRGVLDEATGKWGLRVNRVEIKAIDPPQSIKDAMQKQMRAER 187
Query: 185 ERRARITLAEAERQA----AEKLREAAEIISE 212
++RA I AE +RQ+ AE ++AA + +E
Sbjct: 188 DKRAAILGAEGQRQSQILTAEGDKQAAVLRAE 219
>pir||A82838 conserved hypothetical protein XF0185 [imported] - Xylella
fastidiosa (strain 9a5c)
>gi|9104984|gb|AAF82998.1|AE003872_9 (AE003872)
conserved hypothetical protein [Xylella fastidiosa]
Length = 337
Score = 149 bits (373), Expect = 3e-35
Identities = 80/200 (40%), Positives = 120/200 (60%), Gaps = 2/200 (1%)
Query: 2 ILPTNFFVTTIILLFILIFLASAIKIVKEYERAVIFRLGRVVGARGPGLFFIIP-IFEKA 60
+LP N +++ +++ S I + + YE V + GR PGL F+IP I+
Sbjct: 20 MLPNNVLALIVLVAGVILLFKSVIMVPQGYEWTVE-KFGRYTDTMKPGLHFLIPLIYSVG 78
Query: 61 VIVDLRTQVLDVPVQETITKDNVPVRVNAVVYFRVVDPVKAVTQVKNYIMATSQISQTTL 120
V + QVL VP QE ITKDN VRV+ VV+F+V+D KA +V N +A + QT +
Sbjct: 79 RKVSMMEQVLAVPSQEVITKDNAGVRVDGVVFFQVLDAAKAAYEVANLEIAMIALVQTNI 138
Query: 121 RSVIGQAHLDELLSERDKLNMQLQRIIDEATDPWGIKVTAVEIKDVELPAGMQRAMAKQA 180
R+V+G DE LS+R+ +N +L +++ AT PWG+KVT ++IKD++ P + +M +Q
Sbjct: 139 RTVVGSIDFDESLSQRETINAKLLSVVEHATSPWGVKVTRIDIKDIQPPHNLAESMQQQK 198
Query: 181 EAERERRARITLAEAERQAA 200
AE+ RRA I AE RQ+A
Sbjct: 199 MAEQTRRATILEAEGVRQSA 218
>gb|AAC46209.1| (AF002133) MAV266 [Mycobacterium avium]
Length = 266
Score = 147 bits (368), Expect = 1e-34
Identities = 71/192 (36%), Positives = 124/192 (63%), Gaps = 1/192 (0%)
Query: 12 IILLFILIFLASAIKIVKEYERAVIFRLGRVVGARGPGLFFIIPIFEKA-VIVDLRTQVL 70
++++F ++ +A ++ ++ E AVI RLGR + ++P ++ VDLR +V+
Sbjct: 13 VLVIFAIVVVAKSVALIPLAEAAVIERLGRYSRTVSGSVTLLVPFIDRIRARVDLRERVV 72
Query: 71 DVPVQETITKDNVPVRVNAVVYFRVVDPVKAVTQVKNYIMATSQISQTTLRSVIGQAHLD 130
P Q IT+DN+ + ++ VVYF+V P AV ++ NYI+ Q++ TT+R+V+G L+
Sbjct: 73 SFPPQPVITEDNLTLNIDTVVYFQVTVPQAAVYEISNYIVGVEQLTTTTVRNVVGGMTLE 132
Query: 131 ELLSERDKLNMQLQRIIDEATDPWGIKVTAVEIKDVELPAGMQRAMAKQAEAERERRARI 190
+ L+ RD++N QL+ ++DEAT WG++V VE++ ++ P +Q +M KQ +A+RE+RA I
Sbjct: 133 QTLTSRDQINGQLRGVLDEATGRWGLRVARVELRSIDPPPSIQASMEKQMKADREKRAMI 192
Query: 191 TLAEAERQAAEK 202
AE R++A K
Sbjct: 193 LTAEGSRESAIK 204
>pir||T36857 conserved hypothetical protein SCI5.04c - Streptomyces coelicolor
>gi|5123532|emb|CAB45288.1| (AL079332) conserved
hypothetical protein [Streptomyces coelicolor A3(2)]
Length = 319
Score = 143 bits (357), Expect = 2e-33
Identities = 76/203 (37%), Positives = 123/203 (60%), Gaps = 4/203 (1%)
Query: 9 VTTIILLFILIFLA--SAIKIVKEYERAVIFRLGRVVGARGPGLFFIIPIFEKAVI-VDL 65
+ +I+L +L+F+A I+++ + A++ R GR GL ++P + +DL
Sbjct: 5 IIVLIILVVLVFIALIKTIQVIPQASAAIVERFGRYTRTLNAGLNIVVPFIDTIRNRIDL 64
Query: 66 RTQVLDVPVQETITKDNVPVRVNAVVYFRVVDPVKAVTQVKNYIMATSQISQTTLRSVIG 125
R QV+ P Q IT+DN+ V ++ V+Y++V D A +V +YI A Q++ TTLR++IG
Sbjct: 65 REQVVPFPPQPVITQDNLVVNIDTVIYYQVTDARAATYEVASYIQAIEQLTVTTLRNIIG 124
Query: 126 QAHLDELLSERDKLNMQLQRIIDEATDPWGIKVTAVEIKDVELPAGMQRAMAKQAEAERE 185
L+ L+ R+++N L+ ++DEAT WGI+V VE+K +E P +Q +M KQ A+R+
Sbjct: 125 GMDLERTLTSREEINAALRGVLDEATGKWGIRVNRVELKAIEPPTSIQDSMEKQMRADRD 184
Query: 186 RRARITLAEAERQAAEKLREAAE 208
+RA I AE RQ +E LR E
Sbjct: 185 KRAAILQAEGVRQ-SEILRAEGE 206
>gb|AAF44771.1|AF235154_1 (AF235154) GNA1220 [Neisseria gonorrhoeae]
>gi|7274434|gb|AAF44772.1|AF235155_1 (AF235155) GNA1220
[Neisseria gonorrhoeae]
>gi|7274436|gb|AAF44773.1|AF235156_1 (AF235156) GNA1220
[Neisseria gonorrhoeae]
Length = 315
Score = 141 bits (351), Expect = 1e-32
Identities = 84/202 (41%), Positives = 121/202 (59%), Gaps = 5/202 (2%)
Query: 7 FFVTTIILLFILIFLASAIKIVKEYERAVIFRLGRVVGARGPGLFFIIPIFEK-AVIVDL 65
FF+ I+L + +F + ++ + E V+ RLGR A GL +IP ++ A L
Sbjct: 3 FFI--ILLAAVAVFGFKSFVVIPQQEVHVVERLGRFHRALTAGLNILIPFIDRVAYRHSL 60
Query: 66 RTQVLDVPVQETITKDNVPVRVNAVVYFRVVDPVKAVTQVKNYIMATSQISQTTLRSVIG 125
+ LDVP Q IT+DN + V+ ++YF+V DP A NYIMA +Q++QTTLRSVIG
Sbjct: 61 KEIPLDVPSQVCITRDNTQLTVDGIIYFQVTDPKLASYGSSNYIMAITQLAQTTLRSVIG 120
Query: 126 QAHLDELLSERDKLNMQLQRIIDEATDPWGIKVTAVEIKDVELPAGMQRAMAKQAEAERE 185
+ LD+ ERD++N + +DEA WG+KV EIKD+ P + RAM Q AERE
Sbjct: 121 RMELDKTFEERDEINSTVVSALDEAAGAWGVKVLRYEIKDLVPPQEILRAMQAQITAERE 180
Query: 186 RRARITLAEAERQAAEKLREAA 207
+RARI AE+E + E++ A+
Sbjct: 181 KRARI--AESEGRKIEQINLAS 200
>pir||F81107 stomatin/Mec-2 family protein NMB1220 [imported] - Neisseria
meningitidis (group B strain MD58)
>gi|7226459|gb|AAF41602.1| (AE002470) stomatin/Mec-2
family protein [Neisseria meningitidis MC58]
>gi|7228873|gb|AAF42670.1|AF226522_1 (AF226522) membrane
protein GNA1220 [Neisseria meningitidis]
>gi|7228877|gb|AAF42672.1|AF226524_1 (AF226524) membrane
protein GNA1220 [Neisseria meningitidis]
>gi|7228879|gb|AAF42673.1|AF226525_1 (AF226525) membrane
protein GNA1220 [Neisseria meningitidis]
>gi|7228881|gb|AAF42674.1|AF226526_1 (AF226526) membrane
protein GNA1220 [Neisseria meningitidis]
>gi|7228887|gb|AAF42677.1|AF226529_1 (AF226529) membrane
protein GNA1220 [Neisseria meningitidis]
>gi|7228889|gb|AAF42678.1|AF226530_1 (AF226530) membrane
protein GNA1220 [Neisseria meningitidis]
>gi|7228893|gb|AAF42680.1|AF226532_1 (AF226532) membrane
protein GNA1220 [Neisseria meningitidis]
>gi|7228899|gb|AAF42683.1|AF226535_1 (AF226535) membrane
protein GNA1220 [Neisseria meningitidis]
>gi|7228905|gb|AAF42686.1|AF226538_1 (AF226538) membrane
protein GNA1220 [Neisseria meningitidis]
>gi|7228909|gb|AAF42688.1|AF226540_1 (AF226540) membrane
protein GNA1220 [Neisseria meningitidis]
Length = 315
Score = 140 bits (350), Expect = 1e-32
Identities = 83/202 (41%), Positives = 122/202 (60%), Gaps = 5/202 (2%)
Query: 7 FFVTTIILLFILIFLASAIKIVKEYERAVIFRLGRVVGARGPGLFFIIPIFEK-AVIVDL 65
FF+ I+L+ + +F + ++ + E V+ RLGR A GL +IP ++ A L
Sbjct: 3 FFI--ILLVAVAVFGFKSFVVIPQQEVHVVERLGRFHRALTAGLNILIPFIDRVAYRHSL 60
Query: 66 RTQVLDVPVQETITKDNVPVRVNAVVYFRVVDPVKAVTQVKNYIMATSQISQTTLRSVIG 125
+ LDVP Q IT+DN + V+ ++YF+V DP A NYIMA +Q++QTTLRSVIG
Sbjct: 61 KEIPLDVPSQVCITRDNTQLTVDGIIYFQVTDPKLASYGSSNYIMAITQLAQTTLRSVIG 120
Query: 126 QAHLDELLSERDKLNMQLQRIIDEATDPWGIKVTAVEIKDVELPAGMQRAMAKQAEAERE 185
+ LD+ ERD++N + +DEA WG+KV EIKD+ P + R+M Q AERE
Sbjct: 121 RMELDKTFEERDEINSTVVAALDEAAGAWGVKVLRYEIKDLVPPQEILRSMQAQITAERE 180
Query: 186 RRARITLAEAERQAAEKLREAA 207
+RARI AE+E + E++ A+
Sbjct: 181 KRARI--AESEGRKIEQINLAS 200
>gb|AAF42660.1|AF226511_1 (AF226511) membrane protein GNA1220 [Neisseria meningitidis]
>gi|7228856|gb|AAF42662.1|AF226513_1 (AF226513) membrane
protein GNA1220 [Neisseria meningitidis]
>gi|7228860|gb|AAF42664.1|AF226515_1 (AF226515) membrane
protein GNA1220 [Neisseria meningitidis]
>gi|7228864|gb|AAF42666.1|AF226517_1 (AF226517) membrane
protein GNA1220 [Neisseria meningitidis]
>gi|7228866|gb|AAF42667.1|AF226518_1 (AF226518) membrane
protein GNA1220 [Neisseria meningitidis]
>gi|7228871|gb|AAF42669.1|AF226521_1 (AF226521) membrane
protein GNA1220 [Neisseria meningitidis]
>gi|7228875|gb|AAF42671.1|AF226523_1 (AF226523) membrane
protein GNA1220 [Neisseria meningitidis]
>gi|7228891|gb|AAF42679.1|AF226531_1 (AF226531) membrane
protein GNA1220 [Neisseria meningitidis]
>gi|7228901|gb|AAF42684.1|AF226536_1 (AF226536) membrane
protein GNA1220 [Neisseria meningitidis]
>gi|7228903|gb|AAF42685.1|AF226537_1 (AF226537) membrane
protein GNA1220 [Neisseria meningitidis]
>gi|7228907|gb|AAF42687.1|AF226539_1 (AF226539) membrane
protein GNA1220 [Neisseria meningitidis]
Length = 315
Score = 140 bits (350), Expect = 1e-32
Identities = 83/202 (41%), Positives = 122/202 (60%), Gaps = 5/202 (2%)
Query: 7 FFVTTIILLFILIFLASAIKIVKEYERAVIFRLGRVVGARGPGLFFIIPIFEK-AVIVDL 65
FF+ I+L+ + +F + ++ + E V+ RLGR A GL +IP ++ A L
Sbjct: 3 FFI--ILLVAVAVFGFKSFVVIPQQEVHVVERLGRFHRALTAGLNILIPFIDRVAYRHSL 60
Query: 66 RTQVLDVPVQETITKDNVPVRVNAVVYFRVVDPVKAVTQVKNYIMATSQISQTTLRSVIG 125
+ LDVP Q IT+DN + V+ ++YF+V DP A NYIMA +Q++QTTLRSVIG
Sbjct: 61 KEIPLDVPSQVCITRDNTQLTVDGIIYFQVTDPKLASYGSSNYIMAITQLAQTTLRSVIG 120
Query: 126 QAHLDELLSERDKLNMQLQRIIDEATDPWGIKVTAVEIKDVELPAGMQRAMAKQAEAERE 185
+ LD+ ERD++N + +DEA WG+KV EIKD+ P + R+M Q AERE
Sbjct: 121 RMELDKTFEERDEINSTVVSALDEAAGAWGVKVLRYEIKDLVPPQEILRSMQAQITAERE 180
Query: 186 RRARITLAEAERQAAEKLREAA 207
+RARI AE+E + E++ A+
Sbjct: 181 KRARI--AESEGRKIEQINLAS 200
>pir||H81907 probable periplasmic protein NMA1382 [imported] - Neisseria
meningitidis (group A strain Z2491)
>gi|7228854|gb|AAF42661.1|AF226512_1 (AF226512) membrane
protein GNA1220 [Neisseria meningitidis]
>gi|7228911|gb|AAF42689.1|AF226541_1 (AF226541) membrane
protein GNA1220 [Neisseria meningitidis]
>gi|7380050|emb|CAB84628.1| (AL162755) putative
periplasmic protein [Neisseria meningitidis Z2491]
Length = 315
Score = 140 bits (350), Expect = 1e-32
Identities = 83/202 (41%), Positives = 122/202 (60%), Gaps = 5/202 (2%)
Query: 7 FFVTTIILLFILIFLASAIKIVKEYERAVIFRLGRVVGARGPGLFFIIPIFEK-AVIVDL 65
FF+ I+L +++F + ++ + E V+ RLGR A GL +IP ++ A L
Sbjct: 3 FFI--ILLAAVVVFGFKSFVVIPQQEVHVVERLGRFHRALTAGLNILIPFIDRVAYRHSL 60
Query: 66 RTQVLDVPVQETITKDNVPVRVNAVVYFRVVDPVKAVTQVKNYIMATSQISQTTLRSVIG 125
+ LDVP Q IT+DN + V+ ++YF+V DP A NYIMA +Q++QTTLRSVIG
Sbjct: 61 KEIPLDVPSQVCITRDNTQLTVDGIIYFQVTDPKLASYGSSNYIMAITQLAQTTLRSVIG 120
Query: 126 QAHLDELLSERDKLNMQLQRIIDEATDPWGIKVTAVEIKDVELPAGMQRAMAKQAEAERE 185
+ LD+ ERD++N + +DEA WG+KV EIKD+ P + R+M Q AERE
Sbjct: 121 RMELDKTFEERDEINSTVVSALDEAAGAWGVKVLRYEIKDLVPPQEILRSMQAQITAERE 180
Query: 186 RRARITLAEAERQAAEKLREAA 207
+RARI AE+E + E++ A+
Sbjct: 181 KRARI--AESEGRKIEQINLAS 200
>gb|AAF42668.1|AF226519_1 (AF226519) membrane protein GNA1220 [Neisseria meningitidis]
Length = 315
Score = 140 bits (350), Expect = 1e-32
Identities = 83/202 (41%), Positives = 122/202 (60%), Gaps = 5/202 (2%)
Query: 7 FFVTTIILLFILIFLASAIKIVKEYERAVIFRLGRVVGARGPGLFFIIPIFEK-AVIVDL 65
FF+ I+L +++F + ++ + E V+ RLGR A GL +IP ++ A L
Sbjct: 3 FFI--ILLAAVVVFGFKSFVVIPQQEVHVVERLGRFHRALTAGLNILIPFIDRVAYRHSL 60
Query: 66 RTQVLDVPVQETITKDNVPVRVNAVVYFRVVDPVKAVTQVKNYIMATSQISQTTLRSVIG 125
+ LDVP Q IT+DN + V+ ++YF+V DP A NYIMA +Q++QTTLRSVIG
Sbjct: 61 KEIPLDVPSQVCITRDNTQLTVDGIIYFQVTDPKLASYGSSNYIMAITQLAQTTLRSVIG 120
Query: 126 QAHLDELLSERDKLNMQLQRIIDEATDPWGIKVTAVEIKDVELPAGMQRAMAKQAEAERE 185
+ LD+ ERD++N + +DEA WG+KV EIKD+ P + R+M Q AERE
Sbjct: 121 RMELDKTFEERDEINSTVVAALDEAAGAWGVKVLRYEIKDLVPPQEILRSMQAQITAERE 180
Query: 186 RRARITLAEAERQAAEKLREAA 207
+RARI AE+E + E++ A+
Sbjct: 181 KRARI--AESEGRKIEQINLAS 200
>gb|AAF42663.1|AF226514_1 (AF226514) membrane protein GNA1220 [Neisseria meningitidis]
>gi|7228862|gb|AAF42665.1|AF226516_1 (AF226516) membrane
protein GNA1220 [Neisseria meningitidis]
>gi|7228897|gb|AAF42682.1|AF226534_1 (AF226534) membrane
protein GNA1220 [Neisseria meningitidis]
Length = 315
Score = 139 bits (348), Expect = 2e-32
Identities = 83/202 (41%), Positives = 121/202 (59%), Gaps = 5/202 (2%)
Query: 7 FFVTTIILLFILIFLASAIKIVKEYERAVIFRLGRVVGARGPGLFFIIPIFEK-AVIVDL 65
FF+ I+L + +F + ++ + E V+ RLGR A GL +IP ++ A L
Sbjct: 3 FFI--ILLAAVAVFGFKSFVVIPQQEVHVVERLGRFHRALTAGLNILIPFIDRVAYRHSL 60
Query: 66 RTQVLDVPVQETITKDNVPVRVNAVVYFRVVDPVKAVTQVKNYIMATSQISQTTLRSVIG 125
+ LDVP Q IT+DN + V+ ++YF+V DP A NYIMA +Q++QTTLRSVIG
Sbjct: 61 KEIPLDVPSQVCITRDNTQLTVDGIIYFQVTDPKLASYGSSNYIMAITQLAQTTLRSVIG 120
Query: 126 QAHLDELLSERDKLNMQLQRIIDEATDPWGIKVTAVEIKDVELPAGMQRAMAKQAEAERE 185
+ LD+ ERD++N + +DEA WG+KV EIKD+ P + R+M Q AERE
Sbjct: 121 RMELDKTFEERDEINSTVVAALDEAAGAWGVKVLRYEIKDLVPPQEILRSMQAQITAERE 180
Query: 186 RRARITLAEAERQAAEKLREAA 207
+RARI AE+E + E++ A+
Sbjct: 181 KRARI--AESEGRKIEQINLAS 200
>gb|AAF42676.1|AF226528_1 (AF226528) membrane protein GNA1220 [Neisseria meningitidis]
>gi|7228895|gb|AAF42681.1|AF226533_1 (AF226533) membrane
protein GNA1220 [Neisseria meningitidis]
Length = 315
Score = 139 bits (348), Expect = 2e-32
Identities = 83/202 (41%), Positives = 122/202 (60%), Gaps = 5/202 (2%)
Query: 7 FFVTTIILLFILIFLASAIKIVKEYERAVIFRLGRVVGARGPGLFFIIPIFEK-AVIVDL 65
FF+ I+L+ + +F + ++ + E V+ RLGR A GL +IP ++ A L
Sbjct: 3 FFI--ILLVAVAVFGFKSFVVIPQQEVHVVERLGRFHRALTAGLNILIPFIDRVAYRHSL 60
Query: 66 RTQVLDVPVQETITKDNVPVRVNAVVYFRVVDPVKAVTQVKNYIMATSQISQTTLRSVIG 125
+ LDVP Q IT+DN + V+ ++YF+V DP A NYIMA +Q++QTTLRSVIG
Sbjct: 61 KEIPLDVPSQVCITRDNTQLTVDGIIYFQVTDPKLASYGSSNYIMAITQLAQTTLRSVIG 120
Query: 126 QAHLDELLSERDKLNMQLQRIIDEATDPWGIKVTAVEIKDVELPAGMQRAMAKQAEAERE 185
+ LD+ ERD++N + +DEA WG+KV EIKD+ P + R+M Q AERE
Sbjct: 121 RMELDKTFEERDEINSIVVSALDEAAGAWGVKVLRYEIKDLVPPQEILRSMQAQITAERE 180
Query: 186 RRARITLAEAERQAAEKLREAA 207
+RARI AE+E + E++ A+
Sbjct: 181 KRARI--AESEGRKIEQINLAS 200
>gb|AAF42675.1|AF226527_1 (AF226527) membrane protein GNA1220 [Neisseria meningitidis]
Length = 315
Score = 139 bits (346), Expect = 4e-32
Identities = 83/202 (41%), Positives = 121/202 (59%), Gaps = 5/202 (2%)
Query: 7 FFVTTIILLFILIFLASAIKIVKEYERAVIFRLGRVVGARGPGLFFIIPIFEK-AVIVDL 65
FF+ I+L + +F + ++ + E V+ RLGR A GL +IP ++ A L
Sbjct: 3 FFI--ILLAAVAVFGFKSFVVIPQQEVHVVERLGRFHRALTAGLNILIPFIDRVAYRHSL 60
Query: 66 RTQVLDVPVQETITKDNVPVRVNAVVYFRVVDPVKAVTQVKNYIMATSQISQTTLRSVIG 125
+ LDVP Q IT+DN + V+ ++YF+V DP A NYIMA +Q++QTTLRSVIG
Sbjct: 61 KEIPLDVPSQVCITRDNTQLTVDGIIYFQVTDPKLASYGSSNYIMAITQLAQTTLRSVIG 120
Query: 126 QAHLDELLSERDKLNMQLQRIIDEATDPWGIKVTAVEIKDVELPAGMQRAMAKQAEAERE 185
+ LD+ ERD++N + +DEA WG+KV EIKD+ P + R+M Q AERE
Sbjct: 121 RMELDKTFEERDEINSIVVSALDEAAGAWGVKVLRYEIKDLVPPQEILRSMQAQITAERE 180
Query: 186 RRARITLAEAERQAAEKLREAA 207
+RARI AE+E + E++ A+
Sbjct: 181 KRARI--AESEGRKIEQINLAS 200
>gb|AAF47921.1| (AE003481) CG7468 gene product [Drosophila melanogaster]
Length = 382
Score = 137 bits (342), Expect = 1e-31
Identities = 100/295 (33%), Positives = 149/295 (49%), Gaps = 66/295 (22%)
Query: 26 KIVKEYERAVIFRLGRVV--GARGPGLFFIIPIFEKAVIVDLRTQVLDVPVQETITKDNV 83
K+V+EYERAVIFRLGR++ GA+GPG+FFI+P + VDLRT+ DVP QE +TKD+V
Sbjct: 12 KVVQEYERAVIFRLGRLMQGGAKGPGIFFILPCIDSYARVDLRTRTYDVPPQEVLTKDSV 71
Query: 84 PVRVNAVVYFRVVDPVKAVTQVKNYIMATSQISQTTLRSVIGQAHLDELLSERDKLNMQL 143
V V+AVVY+RV + ++ V+N +T ++QTTLR+ +G HL E+LSER ++ +
Sbjct: 72 TVSVDAVVYYRVSNATVSIANVENAHHSTRLLAQTTLRNTMGTRHLHEILSERMTISGTM 131
Query: 144 QRIIDE-----------------------------ATDPWGI-------KVTAVEIKDVE 167
Q I T W + V + KD
Sbjct: 132 QFKIRRKSRASPSAAAAAAGARRCANMCKMPSCHGCTASWLLSLPSTMPSVAFLVFKDAV 191
Query: 168 LPA-GMQRAMAKQA---EAER----ERRARITLAEAERQAAEKLREA------------- 206
P +Q A A + ER + R + L A AE REA
Sbjct: 192 RPTNNVQLDEATDAWGIKVERVEIKDVRLPVQLQRAMAAEAEAAREARAKVIAAEGEQKA 251
Query: 207 -------AEIISEHPMALQLRTLQTISDVASDKSNVIVLMLPMEMLKLFKSLSDA 254
+E+I + P ALQLR LQT++ ++++K++ IV LP++++ F ++A
Sbjct: 252 SRALREASEVIGDSPAALQLRYLQTLNTISAEKNSTIVFPLPIDLITYFLKTNEA 306
>gb|AAF68388.1|AF236372_1 (AF236372) stomatin-like protein [Zea mays]
Length = 394
Score = 137 bits (341), Expect = 2e-31
Identities = 73/199 (36%), Positives = 121/199 (60%), Gaps = 4/199 (2%)
Query: 25 IKIVKEYERAVIFRLGRVVGARGPGLFFIIPIFEK-AVIVDLRTQVLDVPVQETITKDNV 83
+ IV E + V+ R G+ + G G +IP ++ A + L+ + + +P Q ITKDNV
Sbjct: 58 VSIVPEKKAYVVERFGKYLKTLGSGFHLLIPAVDRIAYVHSLKEETIPIPHQNAITKDNV 117
Query: 84 PVRVNAVVYFRVVDPVKAVTQVKNYIMATSQISQTTLRSVIGQAHLDELLSERDKLNMQL 143
+++++V+Y +++DP A V+N I A Q++QTT+RS +G+ LD+ ERD LN ++
Sbjct: 118 TIQIDSVIYVKIMDPYLASYGVENPIYAVLQLAQTTMRSELGKITLDKTFEERDALNEKI 177
Query: 144 QRIIDEATDPWGIKVTAVEIKDVELPAGMQRAMAKQAEAERERRARITLAEAERQA---A 200
I+EA WG+K EI+D+ PAG+++AM QAEAER++RA+I +E +QA
Sbjct: 178 VSAINEAATDWGLKCIRYEIRDINPPAGIRQAMEMQAEAERKKRAQILESEGMKQAQILE 237
Query: 201 EKLREAAEIISEHPMALQL 219
+ ++ A+I+ L L
Sbjct: 238 SEGKKTAQILESEGAMLDL 256
>sp|P72655|YB28_SYNY3 HYPOTHETICAL 35.7 KD PROTEIN SLR1128 >gi|7447608|pir||S74505
erthyrocyte band 7 integral membrane protein -
Synechocystis sp. (strain PCC 6803)
>gi|1651729|dbj|BAA16657.1| (D90899) erthyrocyte band 7
integral membrane protein, protein 7.2B, stomatin
[Synechocystis sp.]
Length = 321
Score = 135 bits (337), Expect = 4e-31
Identities = 77/191 (40%), Positives = 113/191 (58%), Gaps = 5/191 (2%)
Query: 15 LFILIFLASAI----KIVKEYERAVIFRLGRVVGARGPGLFFIIPIFEKAVIVD-LRTQV 69
LF L+F SAI KIV E ++ RLG PGL F +PI ++ V R +V
Sbjct: 6 LFFLVFFGSAIGTSVKIVNEKNEYLVERLGSYNKKLTPGLNFTVPILDRVVFKQTTREKV 65
Query: 70 LDVPVQETITKDNVPVRVNAVVYFRVVDPVKAVTQVKNYIMATSQISQTTLRSVIGQAHL 129
+D+P Q ITKDNV + +AVVY+R++D KA +V+N A + T +RS IG+ L
Sbjct: 66 IDIPPQSCITKDNVAITADAVVYWRIIDMEKAYYKVENLQSAMVNLVLTQIRSEIGKLEL 125
Query: 130 DELLSERDKLNMQLQRIIDEATDPWGIKVTAVEIKDVELPAGMQRAMAKQAEAERERRAR 189
D+ + R ++N L R +D +TDPWG+KVT VE++D+ + +M Q AER++RA
Sbjct: 126 DQTFTARTEINELLLRELDISTDPWGVKVTRVELRDIMPSKAVLDSMELQMTAERKKRAA 185
Query: 190 ITLAEAERQAA 200
I +E +R +A
Sbjct: 186 ILTSEGQRDSA 196
>pir||T39599 conserved hypothetical protein SPBC16G5.07c - fission yeast
(Schizosaccharomyces pombe) >gi|3133101|emb|CAA19027.1|
(AL023554) conserved hypothetical protein.
[Schizosaccharomyces pombe]
Length = 354
Score = 133 bits (331), Expect = 2e-30
Identities = 82/224 (36%), Positives = 127/224 (56%), Gaps = 9/224 (4%)
Query: 25 IKIVKEYERAVIFRLGRVVGARGPGLFFIIPIFEK-AVIVDLRTQVLDVPVQETITKDNV 83
IK V + V+ R+GR PG+ F+ PI +K A I L+ + L++P Q IT DNV
Sbjct: 53 IKFVPQQVAYVVERMGRFSRILTPGVAFLAPIIDKIAYIHSLKERALEIPTQSAITLDNV 112
Query: 84 PVRVNAVVYFRVVDPVKAVTQVKNYIMATSQISQTTLRSVIGQAHLDELLSERDKLNMQL 143
+ ++ V+Y +V DP KA V++ A SQ++QTT+RS IG+ LD +L ER LN+ +
Sbjct: 113 SLGLDGVLYIQVYDPYKASYGVEDADYAISQLAQTTMRSEIGRLTLDHVLRERQSLNIHI 172
Query: 144 QRIIDEATDPWGIKVTAVEIKDVELPAGMQRAMAKQAEAERERRARITLAEAERQAAEKL 203
I++A + WGI+ EI+D+ P + AM +Q AER++RA I +E +RQAA +
Sbjct: 173 TDAINKAAESWGIRCLRHEIRDIRPPESVVMAMHQQVSAERQKRAEILESEGKRQAAINV 232
Query: 204 REA---AEIISEHPMALQ-----LRTLQTISDVASDKSNVIVLM 239
E AEI+ ++ L Q I + AS ++ I ++
Sbjct: 233 AEGDKQAEILDSEGQKIKTINSALAEAQAIREKASATASGIAVL 276
>pir||T21562 hypothetical protein F30A10.5 - Caenorhabditis elegans
>gi|3876548|emb|CAB03018.1| (Z81072) predicted using
Genefinder~Similarity to Human erythrocyte band 7
integral membrane protein (SW:BAN7_HUMAN), contains
similarity to Pfam domain: PF01145 (SPFH domain / Band 7
family), Score=170.0, E-value=1.3e-47, N=1~cDNA EST
yk543b6.3 comes >
Length = 334
Score = 130 bits (323), Expect = 2e-29
Identities = 80/224 (35%), Positives = 132/224 (58%), Gaps = 15/224 (6%)
Query: 23 SAIKIVKEYERAVIFRLGRVVGARGPGLFFIIPIFEKAVIV-DLRTQVLDVPVQETITKD 81
+ I V + E V+ R+G+ PGL F++PI +K V +LR +++P Q IT D
Sbjct: 43 TVINFVPQQEAWVVERMGKFYKILEPGLNFLLPIIDKIKFVQNLREIAIEIPEQGAITID 102
Query: 82 NVPVRVNAVVYFRVVDPVKAVTQ---VKNYIMATSQISQTTLRSVIGQAHLDELLSERDK 138
NV +R++ V+Y RV DP KA V + A +Q++QTT+RS +G+ +LD + ER+
Sbjct: 103 NVQLRLDGVLYLRVFDPYKACDASYGVDDPEFAVTQLAQTTMRSEVGKINLDTVFKEREL 162
Query: 139 LNMQLQRIIDEATDPWGIKVTAVEIKDVELPAGMQRAMAKQAEAERERRARITLAEAERQ 198
LN + I++A+ PWGI+ EI+D+++P+ +Q AM Q EAER++RA I +E R+
Sbjct: 163 LNENIVFAINKASAPWGIQCMRYEIRDMQMPSKIQEAMQMQVEAERKKRAAILESEGIRE 222
Query: 199 A----AEKLREAAEIISEHPMALQLRTLQTISDVASDKSNVIVL 238
A AE +++A + SE A ++ +VA ++ ++L
Sbjct: 223 AAINRAEGDKKSAILASEAVQAERI-------NVAKGEAEAVIL 259
>pir||T05863 hypothetical protein T29A15.70 - Arabidopsis thaliana
>gi|4469009|emb|CAB38270.1| (AL035602) putative protein
[Arabidopsis thaliana] >gi|7269612|emb|CAB81408.1|
(AL161571) putative protein [Arabidopsis thaliana]
Length = 515
Score = 130 bits (323), Expect = 2e-29
Identities = 69/176 (39%), Positives = 109/176 (61%), Gaps = 1/176 (0%)
Query: 25 IKIVKEYERAVIFRLGRVVGARGPGLFFIIPIFEK-AVIVDLRTQVLDVPVQETITKDNV 83
I+IV E + VI R G+ G+ F+IP ++ A + L+ + + +P Q ITKDNV
Sbjct: 63 IRIVPERKAFVIERFGKYATTLPSGIHFLIPFVDRIAYVHSLKEEAIPIPNQTAITKDNV 122
Query: 84 PVRVNAVVYFRVVDPVKAVTQVKNYIMATSQISQTTLRSVIGQAHLDELLSERDKLNMQL 143
+ ++ V+Y ++VDP A V++ I A Q++QTT+RS +G+ LD+ ERD LN ++
Sbjct: 123 SIHIDGVLYVKIVDPKLASYGVESPIYAVVQLAQTTMRSELGKITLDKTFEERDTLNEKI 182
Query: 144 QRIIDEATDPWGIKVTAVEIKDVELPAGMQRAMAKQAEAERERRARITLAEAERQA 199
I+ A WG++ EI+D+ P G++ AM QAEAER++RA+I +E ERQ+
Sbjct: 183 VEAINVAAKDWGLQCLRYEIRDIMPPHGVRAAMEMQAEAERKKRAQILESEGERQS 238
>pir||T18493 hypothetical protein C0800w - malaria parasite (Plasmodium
falciparum) >gi|3758847|emb|CAB11132.1| (Z98551) band
7-related protein [Plasmodium falciparum]
Length = 374
Score = 129 bits (322), Expect = 3e-29
Identities = 75/239 (31%), Positives = 133/239 (55%), Gaps = 14/239 (5%)
Query: 27 IVKEYERAVIFRLGRVVGARGPGLFFIIPIFEK-AVIVDLRTQVLDVPVQETITKDNVPV 85
I+ + ++ RLG+ G+ F+IP +K A + L+ + + +P Q ITKDNV +
Sbjct: 81 IIPQETAYIVERLGKYNKTLLAGIHFLIPFIDKIAYVFSLKEETITIPNQTAITKDNVTL 140
Query: 86 RVNAVVYFRVVDPVKAVTQVKNYIMATSQISQTTLRSVIGQAHLDELLSERDKLNMQLQR 145
++ V+Y + +P + +++ + A +Q++Q T+RS +G+ LD ERD LN +L +
Sbjct: 141 NIDGVLYIKCDNPYNSSYAIEDAVFAVTQLAQVTMRSELGKLTLDATFLERDNLNEKLVK 200
Query: 146 IIDEATDPWGIKVTAVEIKDVELPAGMQRAMAKQAEAERERRARITLAEAERQ-----AA 200
I+E+ WGIK EI+D+ LP ++ AM KQAEAER +RA I +E ER+ A
Sbjct: 201 AINESAKNWGIKCMRYEIRDIILPVNIKNAMEKQAEAERRKRAEILQSEGERESEINIAI 260
Query: 201 EKLREAAEIISEHPMALQLR---TLQTISDVAS-----DKSNVIVLMLPMEMLKLFKSL 251
K R++ I A++ + T + I +++ D +N I L++ + + +F ++
Sbjct: 261 GKKRKSILIAEGQSFAIKAKADATAEAIEIISNKIKKLDSNNAISLLVAEQYIDVFSNI 319
>gi|7305503 stomatin-like protein 2 [Homo sapiens]
>gi|6456118|gb|AAF09142.1|AF190167_1 (AF190167) membrane
associated protein SLP-2 [Homo sapiens]
>gi|9652259|gb|AAF91466.1|AF282596_1 (AF282596)
stomatin-like protein 2 [Homo sapiens]
Length = 356
Score = 129 bits (321), Expect = 3e-29
Identities = 71/215 (33%), Positives = 124/215 (57%), Gaps = 3/215 (1%)
Query: 23 SAIKIVKEYERAVIFRLGRVVGARGPGLFFIIPIFEKAVIVD-LRTQVLDVPVQETITKD 81
+ + V + E V+ R+GR PGL +IP+ ++ V L+ V++VP Q +T D
Sbjct: 36 TVVLFVPQQEAWVVERMGRFHRILEPGLNILIPVLDRIRYVQSLKEIVINVPEQSAVTLD 95
Query: 82 NVPVRVNAVVYFRVVDPVKAVTQVKNYIMATSQISQTTLRSVIGQAHLDELLSERDKLNM 141
NV ++++ V+Y R++DP KA V++ A +Q++QTT+RS +G+ LD++ ER+ LN
Sbjct: 96 NVTLQIDGVLYLRIMDPYKASYGVEDPEYAVTQLAQTTMRSELGKLSLDKVFRERESLNA 155
Query: 142 QLQRIIDEATDPWGIKVTAVEIKDVELPAGMQRAMAKQAEAERERRARITLAEAERQAAE 201
+ I++A D WGI+ EIKD+ +P ++ +M Q EAER +RA + +E R++A
Sbjct: 156 SIVDAINQAADCWGIRCLRYEIKDIHVPPRVKESMQMQVEAERRKRATVLESEGTRESAI 215
Query: 202 KLREAAEIISEHPMALQLRTLQTISDVASDKSNVI 236
+ E + +A + + I+ A + S V+
Sbjct: 216 NVAEGKK--QAQILASEAEKAEQINQAAGEASAVL 248
>gi|11429564 stomatin-like protein 2 [Homo sapiens]
Length = 377
Score = 129 bits (321), Expect = 3e-29
Identities = 71/215 (33%), Positives = 124/215 (57%), Gaps = 3/215 (1%)
Query: 23 SAIKIVKEYERAVIFRLGRVVGARGPGLFFIIPIFEKAVIVD-LRTQVLDVPVQETITKD 81
+ + V + E V+ R+GR PGL +IP+ ++ V L+ V++VP Q +T D
Sbjct: 57 TVVLFVPQQEAWVVERMGRFHRILEPGLNILIPVLDRIRYVQSLKEIVINVPEQSAVTLD 116
Query: 82 NVPVRVNAVVYFRVVDPVKAVTQVKNYIMATSQISQTTLRSVIGQAHLDELLSERDKLNM 141
NV ++++ V+Y R++DP KA V++ A +Q++QTT+RS +G+ LD++ ER+ LN
Sbjct: 117 NVTLQIDGVLYLRIMDPYKASYGVEDPEYAVTQLAQTTMRSELGKLSLDKVFRERESLNA 176
Query: 142 QLQRIIDEATDPWGIKVTAVEIKDVELPAGMQRAMAKQAEAERERRARITLAEAERQAAE 201
+ I++A D WGI+ EIKD+ +P ++ +M Q EAER +RA + +E R++A
Sbjct: 177 SIVDAINQAADCWGIRCLRYEIKDIHVPPRVKESMQMQVEAERRKRATVLESEGTRESAI 236
Query: 202 KLREAAEIISEHPMALQLRTLQTISDVASDKSNVI 236
+ E + +A + + I+ A + S V+
Sbjct: 237 NVAEGKK--QAQILASEAEKAEQINQAAGEASAVL 269
>dbj|BAA97132.1| (AB018115) contains similarity to stomatin like
protein~gene_id:MJP23.8 [Arabidopsis thaliana]
Length = 401
Score = 129 bits (320), Expect = 4e-29
Identities = 75/204 (36%), Positives = 119/204 (57%), Gaps = 5/204 (2%)
Query: 25 IKIVKEYERAVIFRLGRVVGARGPGLFFIIPIFEK-AVIVDLRTQVLDVPVQETITKDNV 83
I+IV E + VI R G+ G+ F++P ++ A + L+ + + + Q ITKDNV
Sbjct: 106 IRIVPERKACVIERFGKFHTTLPAGIHFLVPFVDRIAYVHSLKEEAIPIGNQTAITKDNV 165
Query: 84 PVRVNAVVYFRVVDPVKAVTQVKNYIMATSQISQTTLRSVIGQAHLDELLSERDKLNMQL 143
+ ++ V+Y ++VDP A V+N I A Q++QTT+RS +G+ LD+ ERD LN ++
Sbjct: 166 SIHIDGVLYVKIVDPKLASYGVENPIYAVMQLAQTTMRSELGKITLDKTFEERDTLNEKI 225
Query: 144 QRIIDEATDPWGIKVTAVEIKDVELPAGMQRAMAKQAEAERERRARITLAEAERQA---- 199
I+ A WG++ EI+D+ P G++ AM QAEAER++RA+I +E ERQA
Sbjct: 226 VEAINVAAKDWGLQCLRYEIRDIMPPNGVRVAMEMQAEAERKKRAQILESEGERQAHINR 285
Query: 200 AEKLREAAEIISEHPMALQLRTLQ 223
A+ + + + SE M Q+ Q
Sbjct: 286 ADGKKSSVILESEAAMMDQVNRAQ 309
>gb|AAF47110.1| (AE003462) CG2970 gene product [Drosophila melanogaster]
Length = 323
Score = 128 bits (318), Expect = 8e-29
Identities = 75/228 (32%), Positives = 126/228 (54%), Gaps = 5/228 (2%)
Query: 28 VKEYERAVIFRLGRVVGARGPGLFFIIPIFEKAVIVD-LRTQVLDVPVQETITKDNVPVR 86
V + E V+ R+GR PGL ++P+ +K V L+ +DVP Q IT DNV +
Sbjct: 3 VPQQEAWVVERMGRFHRILDPGLNILVPVADKIKYVQSLKEIAIDVPKQSAITSDNVTLS 62
Query: 87 VNAVVYFRVVDPVKAVTQVKNYIMATSQISQTTLRSVIGQAHLDELLSERDKLNMQLQRI 146
++ V+Y R++DP KA V++ A +Q++QTT+RS +G+ +D++ ER+ LN+ +
Sbjct: 63 IDGVLYLRIIDPYKASYGVEDPEFAITQLAQTTMRSELGKMSMDKVFRERESLNVSIVDS 122
Query: 147 IDEATDPWGIKVTAVEIKDVELPAGMQRAMAKQAEAERERRARITLAEAERQAAEKLREA 206
I++A++ WGI EI+D+ LP + AM Q EAER +RA I +E R+A + E
Sbjct: 123 INKASEAWGIACLRYEIRDIRLPTRVHEAMQMQVEAERRKRAAILESEGVREAEINIAEG 182
Query: 207 AEIISEHPMALQLRTLQTISDVASDKSNVIVL--MLPMEMLKLFKSLS 252
+A + + I+ + + + +I + +L + KSLS
Sbjct: 183 KR--KSRILASEAERQEHINKASGEAAAIIAVADARARSLLAIAKSLS 228
>gb|AAF29073.1|AF161458_1 (AF161458) HSPC108 [Homo sapiens]
Length = 342
Score = 127 bits (316), Expect = 1e-28
Identities = 70/215 (32%), Positives = 123/215 (56%), Gaps = 3/215 (1%)
Query: 23 SAIKIVKEYERAVIFRLGRVVGARGPGLFFIIPIFEKAVIVD-LRTQVLDVPVQETITKD 81
+ + V + E V+ R+GR PGL +IP+ ++ V L+ V++VP Q +T D
Sbjct: 22 TVVLFVPQQEAWVVERMGRFHRILEPGLNILIPVLDRIRYVQSLKEIVINVPEQSAVTLD 81
Query: 82 NVPVRVNAVVYFRVVDPVKAVTQVKNYIMATSQISQTTLRSVIGQAHLDELLSERDKLNM 141
NV ++++ V+Y R++DP KA V++ A +Q++QTT+RS +G+ LD++ ER+ LN
Sbjct: 82 NVTLQIDGVLYLRIMDPYKASYGVEDPEYAVTQLAQTTMRSELGKLSLDKVFRERESLNA 141
Query: 142 QLQRIIDEATDPWGIKVTAVEIKDVELPAGMQRAMAKQAEAERERRARITLAEAERQAAE 201
+ I++A D WGI+ EIKD+ +P ++ +M Q EAER +R + +E R++A
Sbjct: 142 SIVDAINQAADCWGIRCLRYEIKDIHVPPRVKESMQMQVEAERRKRPTVLESEGTRESAI 201
Query: 202 KLREAAEIISEHPMALQLRTLQTISDVASDKSNVI 236
+ E + +A + + I+ A + S V+
Sbjct: 202 NVAEGKK--QAQILASEAEKAEQINQAAGEASAVL 234
>pir||B71689 hypothetical protein RP328 - Rickettsia prowazekii
>gi|3860888|emb|CAA14788.1| (AJ235271) unknown
[Rickettsia prowazekii]
Length = 311
Score = 126 bits (313), Expect = 3e-28
Identities = 66/193 (34%), Positives = 111/193 (57%), Gaps = 1/193 (0%)
Query: 8 FVTTIILLFILIFLASAIKIVKEYERAVIFRLGRVVGARGPGLFFIIPIFEKAVIVD-LR 66
+ I + ++ + +K+V + + V+ +LG+ PGL +IPI ++ L+
Sbjct: 3 YALLIFSIITILVIIQMVKVVPQQQAWVVEKLGKFDKVLQPGLNLLIPIIQRVAYKHTLK 62
Query: 67 TQVLDVPVQETITKDNVPVRVNAVVYFRVVDPVKAVTQVKNYIMATSQISQTTLRSVIGQ 126
+ +DV Q I+ DNV + ++ V+Y +++DP+ A V N A +Q++QTT+RS IG+
Sbjct: 63 EEAIDVTAQTAISNDNVTLSIDGVLYVKIIDPMAASYGVNNPYYAITQLAQTTMRSEIGK 122
Query: 127 AHLDELLSERDKLNMQLQRIIDEATDPWGIKVTAVEIKDVELPAGMQRAMAKQAEAERER 186
LD ERD LN+ + I++A WGI+ EIKD++ P + +AM Q AER++
Sbjct: 123 LPLDRTFEERDTLNVAIVSAINQAAINWGIQCMRYEIKDIQPPQTILKAMELQVAAERQK 182
Query: 187 RARITLAEAERQA 199
RA+I +E RQA
Sbjct: 183 RAQILESEGNRQA 195
>gi|11426631 podocin [Homo sapiens]
Length = 189
Score = 124 bits (308), Expect = 1e-27
Identities = 62/166 (37%), Positives = 103/166 (61%)
Query: 85 VRVNAVVYFRVVDPVKAVTQVKNYIMATSQISQTTLRSVIGQAHLDELLSERDKLNMQLQ 144
+ ++A+ Y+R+ + ++ + + A + QTT++ ++ L E+L ER + +
Sbjct: 4 MEIDAICYYRMENASLLLSSLAHVSKAVQFLVQTTMKRLLAHRSLTEILLERKSIAQDAK 63
Query: 145 RIIDEATDPWGIKVTAVEIKDVELPAGMQRAMAKQAEAERERRARITLAEAERQAAEKLR 204
+D T WGIKV +EIKDV LPAG+Q ++A +AEA+R+ + R+ AEAE A+E LR
Sbjct: 64 VALDSVTCIWGIKVERIEIKDVRLPAGLQHSLAVEAEAQRQAKVRMIAAEAENAASESLR 123
Query: 205 EAAEIISEHPMALQLRTLQTISDVASDKSNVIVLMLPMEMLKLFKS 250
AAEI+S P A+QLR L T+ ++++K + +VL LP ++L S
Sbjct: 124 MAAEILSGTPAAVQLRYLHTLQSLSTEKPSTVVLPLPFDLLNCLSS 169
>pir||T02246 hypothetical protein P1.11659_4 - human >gi|2984585|gb|AAC07983.1|
(AC004472) P1.11659_4 [Homo sapiens]
Length = 357
Score = 119 bits (296), Expect = 3e-26
Identities = 71/229 (31%), Positives = 124/229 (54%), Gaps = 17/229 (7%)
Query: 23 SAIKIVKEYERAVIFRLGRVVGARGPGLFFIIPIFEKAVIVD-LRTQVLDVPVQETITKD 81
+ + V + E V+ R+GR PGL +IP+ ++ V L+ V++VP Q +T D
Sbjct: 23 TVVLFVPQQEAWVVERMGRFHRILEPGLNILIPVLDRIRYVQSLKEIVINVPEQSAVTLD 82
Query: 82 NVPVRVNAVVYFRVVDPVKAVTQVKNYIMATSQISQTTLRSVIGQAHLDELLSERDKLNM 141
NV ++++ V+Y R++DP KA V++ A +Q++QTT+RS +G+ LD++ ER+ LN
Sbjct: 83 NVTLQIDGVLYLRIMDPYKASYGVEDPEYAVTQLAQTTMRSELGKLSLDKVFRERESLNA 142
Query: 142 QLQRIIDEATDPWGIKVTAVEIKDVELPAGMQRAMAKQ--------------AEAERERR 187
+ I++A D WGI+ EIKD+ +P ++ +M Q EAER +R
Sbjct: 143 SIVDAINQAADCWGIRCLRYEIKDIHVPPRVKESMQMQVGAKEGWEKGLRAPVEAERRKR 202
Query: 188 ARITLAEAERQAAEKLREAAEIISEHPMALQLRTLQTISDVASDKSNVI 236
A + +E R++A + E + +A + + I+ A + S V+
Sbjct: 203 ATVLESEGTRESAINVAEGKK--QAQILASEAEKAEQINQAAGEASAVL 249
>gb|AAF14646.1|AF163772_6 (AF163772) 7138.6 [Leishmania major]
Length = 357
Score = 105 bits (259), Expect = 6e-22
Identities = 58/174 (33%), Positives = 96/174 (54%), Gaps = 1/174 (0%)
Query: 27 IVKEYERAVIFRLGRVVGARGPGLFFIIPIFEKAVI-VDLRTQVLDVPVQETITKDNVPV 85
IV + V+ RLGR G + ++P +K +++ Q +++P Q IT DNV V
Sbjct: 64 IVPQGHEYVVERLGRYHRTLDSGWWVVVPFIDKIRYNYNVKEQGIEIPNQSAITSDNVMV 123
Query: 86 RVNAVVYFRVVDPVKAVTQVKNYIMATSQISQTTLRSVIGQAHLDELLSERDKLNMQLQR 145
++ V++ ++VD KA ++N + ++QTT+RS IG+ LD L ER LN
Sbjct: 124 EIDGVLFLKIVDSCKASYNIENPVFNLINLAQTTMRSEIGRMSLDSLFRERASLNQSTVE 183
Query: 146 IIDEATDPWGIKVTAVEIKDVELPAGMQRAMAKQAEAERERRARITLAEAERQA 199
++ + WGI+ EI+D+ + ++R+M QAEAER++R I +E E A
Sbjct: 184 VLRREANEWGIECKRYEIRDIVVSELVRRSMDLQAEAERKKRKLILESEGESTA 237
>pir||I39620 hypothetical protein X - Anabaena variabilis (fragment)
>gi|600250|dbj|BAA04562.1| (D17710) orfX [Anabaena
variabilis]
Length = 293
Score = 101 bits (249), Expect = 9e-21
Identities = 51/171 (29%), Positives = 99/171 (57%), Gaps = 6/171 (3%)
Query: 62 IVDLRTQVLDVPVQETITKDNVPVRVNAVVYFRVVDPVKA---VTQVKNYIMATSQISQT 118
+ DLR Q L+V Q+ ++KD VP+R+N +R++DP++A ++ + NY+ Q +
Sbjct: 101 VFDLRQQTLEVSGQDILSKDKVPLRLNLTAGYRLLDPLRARNGLSDILNYLYKELQFA-- 158
Query: 119 TLRSVIGQAHLDELLSERDKLNMQLQRIIDEATDPWGIKVTAVEIKDVELPAGMQRAMAK 178
LR +G+ LD LL ++ ++ + I + T +GI+V +V +KD+ LP ++ ++K
Sbjct: 159 -LRGAVGERSLDALLEDKGTIDRSIFEYIRQKTADYGIEVDSVGVKDIILPGEIKTILSK 217
Query: 179 QAEAERERRARITLAEAERQAAEKLREAAEIISEHPMALQLRTLQTISDVA 229
EAE+ +A + E A + A ++ ++P+AL+L+ L+ + +A
Sbjct: 218 VVEAEKAAQANVVRRREETAATRSMLNTARVMEDNPVALRLKELEVLERIA 268
>gi|4759148 stomatin-like protein 1 [Homo sapiens] >gi|4160546|emb|CAA76271.1|
(Y16522) SLP-1 protein [Homo sapiens]
Length = 394
Score = 98.7 bits (242), Expect = 6e-20
Identities = 56/153 (36%), Positives = 88/153 (56%), Gaps = 3/153 (1%)
Query: 14 LLFILIFLAS---AIKIVKEYERAVIFRLGRVVGARGPGLFFIIPIFEKAVIVDLRTQVL 70
LL ++ F S A+KIV YER ++FRLGR+ +GPG+ ++P + VDLRT+
Sbjct: 65 LLLLVTFPISGWFALKIVPTYERMIVFRLGRIRTPQGPGMVLLLPFIDSFQRVDLRTRAF 124
Query: 71 DVPVQETITKDNVPVRVNAVVYFRVVDPVKAVTQVKNYIMATSQISQTTLRSVIGQAHLD 130
+VP + +KD + V A V FR+ DPV +V VK+ AT +Q + + + L
Sbjct: 125 NVPPCKLASKDGAVLSVGADVQFRIWDPVLSVMTVKDLNTATRMTAQNAMTKALLKRPLR 184
Query: 131 ELLSERDKLNMQLQRIIDEATDPWGIKVTAVEI 163
E+ E+ K++ QL I++ T WG++V VE+
Sbjct: 185 EIQMEKLKISDQLLLEINDVTRAWGLEVDRVEL 217
>emb|CAB52016.1| (AL109665) SLP-1 [Homo sapiens]
Length = 390
Score = 98.7 bits (242), Expect = 6e-20
Identities = 56/153 (36%), Positives = 88/153 (56%), Gaps = 3/153 (1%)
Query: 14 LLFILIFLAS---AIKIVKEYERAVIFRLGRVVGARGPGLFFIIPIFEKAVIVDLRTQVL 70
LL ++ F S A+KIV YER ++FRLGR+ +GPG+ ++P + VDLRT+
Sbjct: 58 LLLLVTFPISGWFALKIVPTYERMIVFRLGRIRTPQGPGMVLLLPFIDSFQRVDLRTRAF 117
Query: 71 DVPVQETITKDNVPVRVNAVVYFRVVDPVKAVTQVKNYIMATSQISQTTLRSVIGQAHLD 130
+VP + +KD + V A V FR+ DPV +V VK+ AT +Q + + + L
Sbjct: 118 NVPPCKLASKDGAVLSVGADVQFRIWDPVLSVMTVKDLNTATRMTAQNAMTKALLKRPLR 177
Query: 131 ELLSERDKLNMQLQRIIDEATDPWGIKVTAVEI 163
E+ E+ K++ QL I++ T WG++V VE+
Sbjct: 178 EIQMEKLKISDQLLLEINDVTRAWGLEVDRVEL 210
>gb|AAF06960.1| (AF156557) stomatin related protein [Homo sapiens]
>gi|6671068|gb|AAF23080.1| (AF156564) stomatin related
protein [Homo sapiens]
Length = 398
Score = 98.7 bits (242), Expect = 6e-20
Identities = 56/153 (36%), Positives = 88/153 (56%), Gaps = 3/153 (1%)
Query: 14 LLFILIFLAS---AIKIVKEYERAVIFRLGRVVGARGPGLFFIIPIFEKAVIVDLRTQVL 70
LL ++ F S A+KIV YER ++FRLGR+ +GPG+ ++P + VDLRT+
Sbjct: 65 LLLLVTFPISGWFALKIVPTYERMIVFRLGRIRTPQGPGMVLLLPFIDSFQRVDLRTRAF 124
Query: 71 DVPVQETITKDNVPVRVNAVVYFRVVDPVKAVTQVKNYIMATSQISQTTLRSVIGQAHLD 130
+VP + +KD + V A V FR+ DPV +V VK+ AT +Q + + + L
Sbjct: 125 NVPPCKLASKDGAVLSVGADVQFRIWDPVLSVMTVKDLNTATRMTAQNAMTKALLKRPLR 184
Query: 131 ELLSERDKLNMQLQRIIDEATDPWGIKVTAVEI 163
E+ E+ K++ QL I++ T WG++V VE+
Sbjct: 185 EIQMEKLKISDQLLLEINDVTRAWGLEVDRVEL 217
>gi|11432457 stomatin-like protein 1 [Homo sapiens]
Length = 267
Score = 98.7 bits (242), Expect = 6e-20
Identities = 56/153 (36%), Positives = 88/153 (56%), Gaps = 3/153 (1%)
Query: 14 LLFILIFLAS---AIKIVKEYERAVIFRLGRVVGARGPGLFFIIPIFEKAVIVDLRTQVL 70
LL ++ F S A+KIV YER ++FRLGR+ +GPG+ ++P + VDLRT+
Sbjct: 65 LLLLVTFPISGWFALKIVPTYERMIVFRLGRIRTPQGPGMVLLLPFIDSFQRVDLRTRAF 124
Query: 71 DVPVQETITKDNVPVRVNAVVYFRVVDPVKAVTQVKNYIMATSQISQTTLRSVIGQAHLD 130
+VP + +KD + V A V FR+ DPV +V VK+ AT +Q + + + L
Sbjct: 125 NVPPCKLASKDGAVLSVGADVQFRIWDPVLSVMTVKDLNTATRMTAQNAMTKALLKRPLR 184
Query: 131 ELLSERDKLNMQLQRIIDEATDPWGIKVTAVEI 163
E+ E+ K++ QL I++ T WG++V VE+
Sbjct: 185 EIQMEKLKISDQLLLEINDVTRAWGLEVDRVEL 217
>pir||B83072 conserved hypothetical protein PA4582 [imported] - Pseudomonas
aeruginosa (strain PAO1)
>gi|9950830|gb|AAG07970.1|AE004872_1 (AE004872)
conserved hypothetical protein [Pseudomonas aeruginosa]
Length = 381
Score = 89.7 bits (219), Expect = 3e-17
Identities = 49/168 (29%), Positives = 91/168 (54%)
Query: 62 IVDLRTQVLDVPVQETITKDNVPVRVNAVVYFRVVDPVKAVTQVKNYIMATSQISQTTLR 121
+VD R Q L+V QE +T+D V +R+N +R D + A +++ + + Q LR
Sbjct: 189 LVDTRIQALEVSGQEILTRDKVSLRLNLAANWRYSDVLTAFSRLSKPLEYLYRELQFGLR 248
Query: 122 SVIGQAHLDELLSERDKLNMQLQRIIDEATDPWGIKVTAVEIKDVELPAGMQRAMAKQAE 181
+ +G LDELL + ++ + + + G++V+ + ++D+ LP M+ +A+ E
Sbjct: 249 AAVGTRTLDELLENKQSIDEAVSAHLAAKLEDNGLEVSGLGVRDIILPGEMKTLLAQVVE 308
Query: 182 AERERRARITLAEAERQAAEKLREAAEIISEHPMALQLRTLQTISDVA 229
AE+ +A + E A L A+++ E+P AL+L+ L+T+ VA
Sbjct: 309 AEKAAQANVIRRREETSATRSLLNTAKVMEENPTALRLKELETLERVA 356
>gb|AAD42031.1|AF074953_1 (AF074953) stomatin-like protein UNC24 [Homo sapiens]
Length = 393
Score = 85.8 bits (209), Expect = 5e-16
Identities = 53/162 (32%), Positives = 86/162 (52%), Gaps = 6/162 (3%)
Query: 14 LLFILIFLAS---AIKIVKEYERAVIFRLGRVVGARGPGLFFIIPIFEKAVIVDLRTQVL 70
LL ++ F S A+KIV YER ++FRLGR+ +GPG+ ++P + VDLRT+
Sbjct: 60 LLLLVTFPISGWFALKIVPTYERMIVFRLGRIRTPQGPGMVLLLPFIDSFQRVDLRTRAF 119
Query: 71 DVPVQETITKDNVPVRVNAVVYFRVVDPVKAVTQVKNYIMATSQISQTTLRSVIGQAHLD 130
+VP + +KD + V A V FR+ DPV +V VK+ AT +Q + + + L
Sbjct: 120 NVPPCKLASKDGAVLSVGADVQFRIWDPVLSVMTVKDLNTATRMTAQNAMTKALLKRPLR 179
Query: 131 ELLSERDKLNMQL---QRIIDEATDPWGIKVTAVEIKDVELP 169
E+ E+ K++ QL + D+ W + + ++ V P
Sbjct: 180 EIQMEKLKISDQLLLEDQRCDQGLGGWEVDRVELAVEAVLQP 221
>pir||B72207 ftsH proteinase activity modulator HflC - Thermotoga maritima
(strain MSB8) >gi|4982405|gb|AAD36886.1|AE001819_9
(AE001819) ftsH protease activity modulator HflC
[Thermotoga maritima]
Length = 283
Score = 84.7 bits (206), Expect = 1e-15
Identities = 56/209 (26%), Positives = 113/209 (53%), Gaps = 8/209 (3%)
Query: 7 FFVTTIILLFIL--IFLASAIKIVKEYERAVIFRLGRVVGARG-PGLFFIIPIFEKAVIV 63
+ ++ +I+L ++ I L S+ ++ + ++AV+ R G++V PGL F P + V
Sbjct: 4 WMISLLIILIVVGAILLFSSFYVLDQTQQAVVLRFGKIVAVETEPGLHFKQPFVDNVVRF 63
Query: 64 DLRTQVLDVPVQETITKDNVPVRVNAVVYFRVVDP---VKAVTQVKNYIMATSQISQTTL 120
D R + D+ ++ I D + ++ V +R+ D +K++ VK + + + +
Sbjct: 64 DKRILLYDIEPEKIIAADKKTLVIDTYVLWRIKDAEAFIKSLKSVKLALPRIDDVVYSHV 123
Query: 121 RSVIGQAHLDELLSE-RDKLNMQLQRIIDEATDPWGIKVTAVEIKDVELPAGMQRAMAKQ 179
R++ +A+ DE++SE R+ L ++ + E +GI+V V +K +LPA ++A+ ++
Sbjct: 124 RNIFAKANFDEIISEKREDLLREVTALSREDLKDFGIEVVDVRVKHADLPAENEKAVYER 183
Query: 180 AEAERERRARITLAEAERQAAEKLREAAE 208
+AER A AE E++ A K+R A+
Sbjct: 184 MKAERYSIAAQIRAEGEKE-ARKIRAEAD 211
>pir||A83028 proteinase subunit HflC PA4941 [imported] - Pseudomonas aeruginosa
(strain PAO1) >gi|9951221|gb|AAG08326.1|AE004907_4
(AE004907) protease subunit HflC [Pseudomonas
aeruginosa]
Length = 289
Score = 81.5 bits (198), Expect = 9e-15
Identities = 66/207 (31%), Positives = 106/207 (50%), Gaps = 8/207 (3%)
Query: 9 VTTIILLFILIFLASAIKIVKEYERAVIFRLGRVVGAR-GPGLFFIIPIFEKAVIVDLRT 67
+ I+ + I L +++ +V++ ERAV+ R GRVV + PGL F IP + D R
Sbjct: 7 IALIVGVVAAIVLWNSVYVVQQTERAVMLRFGRVVESDVKPGLHFKIPYVNQVRKFDARL 66
Query: 68 QVLDVPVQETITKDNVPVRVNAVVYFRVVDPVKAVTQVKNY-IMATSQIS---QTTLRSV 123
LD P Q +T + V V+A +RV D + T +A ++S + LR
Sbjct: 67 LTLDAPTQRFLTLEKKAVMVDAYAKWRVADAERFYTATSGLKQIADERLSRRLEAGLRDQ 126
Query: 124 IGQAHLDELLS-ERDKLNMQLQRIIDE-ATDPWGIKVTAVEIKDVELPAGMQRAMAKQAE 181
G+ L E++S ERD L + ++ A GI+V V +K ++LP + R++ ++
Sbjct: 127 FGKRTLHEVVSGERDALMGDITASLNRMAQKELGIEVIDVRVKAIDLPKEVNRSVFERMS 186
Query: 182 AERERRARITLAEAERQAAEKLREAAE 208
ERER AR A+ R+ AE +R A+
Sbjct: 187 TEREREAREHRAKG-RELAEGIRADAD 212
>pir||T32977 unc-24 protein - Caenorhabditis elegans >gi|1353669|gb|AAB06496.1|
(U42013) UNC-24 [Caenorhabditis elegans]
>gi|2854188|gb|AAC02604.1| (AF045644) C. elegans UNC-24
bipartite protein similar to both erythrocyte band 7.2
(stomatin) and nonspecific lipid transfer protein
(GB:U42013) [Caenorhabditis elegans]
Length = 415
Score = 78.0 bits (189), Expect = 1e-13
Identities = 46/170 (27%), Positives = 87/170 (51%), Gaps = 5/170 (2%)
Query: 1 MILPTNFFVTTIILLFILIFLASAIKIVKEYERAVIFRLGRVVGARGPGLFFIIPIFEKA 60
+I +F + + L+F A+K + E+ V+ RLGR RGPG+ +IP +
Sbjct: 67 LIFCVSFLFVVMTMPLSLLF---ALKFISTSEKLVVLRLGRAQKTRGPGITLVIPCIDTT 123
Query: 61 VIVDLRTQVLDVPVQETITKDNVPVRVNAVVYFRVVDPVKAVTQVKNYIMATSQISQTTL 120
V + +VP + IT D V + A V+ ++ DP+ AV V++ + ++ T L
Sbjct: 124 HKVTMSITAFNVPPLQIITTDRGLVELGATVFLKIRDPIAAVCGVQDRNASVRTLANTML 183
Query: 121 RSVIGQAHLDELLSERDK--LNMQLQRIIDEATDPWGIKVTAVEIKDVEL 168
I + + ++ S +D+ ++ L+ + T +G+++T VEI DV++
Sbjct: 184 YRYISKKRICDVTSSQDRRIISANLKDELGSFTCQFGVEITDVEISDVKI 233
>pir||A71722 hflC protein (hflC) RP123 - Rickettsia prowazekii
>gi|3860691|emb|CAA14592.1| (AJ235270) HFLC PROTEIN
(hflC) [Rickettsia prowazekii]
Length = 286
Score = 77.6 bits (188), Expect = 1e-13
Identities = 66/247 (26%), Positives = 116/247 (46%), Gaps = 11/247 (4%)
Query: 14 LLFILIFLASAIKIVKEYERAVIFRLGRVVGA-RGPGLFFIIPIFEKAVIVDLRTQVLDV 72
++F L+ +ASA+ V + + AV+F+ G + PGL IP + D R ++V
Sbjct: 12 IVFGLMLIASALFSVDQRQSAVVFQFGEAIRTIENPGLNIKIPFIQNVEFFDKRLLDVEV 71
Query: 73 PVQETITKDNVPVRVNAVVYFRVVDPVKAVTQVKNY----IMATSQISQTTLRSVIGQAH 128
+E D V V+A F++ +PV V +Y I T + ++++R VIG+
Sbjct: 72 EAKELTAADGKRVIVDAYAKFQINNPVMFYKTVHDYQGVKIRLTRNL-ESSMRKVIGKIS 130
Query: 129 LDELLS-ERDKLNMQLQRIIDEATDPWGIKVTAVEIKDVELPAGMQRAMAKQAEAERERR 187
L LLS ER + + + ++ +GI V V I +LP A+ ++ + RE+
Sbjct: 131 LSSLLSQERSNVMLNILNQVNGEAKSFGIDVVDVRILRADLPKENSAAIYRRMQTAREKE 190
Query: 188 ARITLAEAERQAAEKLREAAEIISEHPMALQLRTLQTISDVASDKSNVI---VLMLPMEM 244
A AE + ++ ++R A+ S+ +A R Q I +K+ I + E
Sbjct: 191 ATQIRAEGQEESV-RIRSKADKESKIILAKAYRDAQIIKGDGDEKAAKIYNAAYSVDPEF 249
Query: 245 LKLFKSL 251
K ++SL
Sbjct: 250 YKFYRSL 256
>sp|O32076|YUAG_BACSU HYPOTHETICAL 56.0 KD PROTEIN IN GLGB-GBSB INTERGENIC REGION
>gi|7474828|pir||A70006 epidermal surface antigen
homolog yuaG - Bacillus subtilis
>gi|2635585|emb|CAB15079.1| (Z99119) alternate gene
name: yuaH~similar to epidermal surface antigen
[Bacillus subtilis]
Length = 509
Score = 72.6 bits (175), Expect = 4e-12
Identities = 51/214 (23%), Positives = 96/214 (44%), Gaps = 21/214 (9%)
Query: 41 RVVGARGPGLFFIIPIFEKAVIVDLRTQVLDVPVQETITKDNVPVRVNAVVYFRVVDPVK 100
R+ RG G F ++P+F++A + L + LDV E T+ VPV + ++ +
Sbjct: 56 RIKIVRGGGTF-VLPVFQQAEPLSLLSSKLDVSTPEVYTEQGVPVMADGTAIIKIGGSIG 114
Query: 101 AVTQVKNYIMATS---------QISQTTLRSVIGQAHLDELLSERDKLNMQLQRIIDEAT 151
+ + S ++ + LRS++G ++E+ R+K + ++QR+ +
Sbjct: 115 EIATAAEQFLGKSKDDREQEAREVLEGHLRSILGSMTVEEIYKNREKFSQEVQRVASQDL 174
Query: 152 DPWGIKVTAVEIKDVELPAGMQRAMAKQ-----------AEAERERRARITLAEAERQAA 200
G+ + + IKDV G ++ K A AE ++ RI AEA++ A
Sbjct: 175 AKMGLVIVSFTIKDVRDKNGYLESLGKPRIAQVKRDADIATAEADKETRIKRAEADKDAK 234
Query: 201 EKLREAAEIISEHPMALQLRTLQTISDVASDKSN 234
+ E A I+E QL+ + + + K+N
Sbjct: 235 KSELERATEIAEAEKINQLKMAEFRREQDTAKAN 268
>pir||B83028 proteinase subunit HflK PA4942 [imported] - Pseudomonas aeruginosa
(strain PAO1) >gi|9951222|gb|AAG08327.1|AE004907_5
(AE004907) protease subunit HflK [Pseudomonas
aeruginosa]
Length = 400
Score = 69.5 bits (167), Expect = 4e-11
Identities = 56/207 (27%), Positives = 94/207 (45%), Gaps = 9/207 (4%)
Query: 13 ILLFILIFLASAIKIVKEYERAVIFRLGRVVGARGPGLFFIIPIFEKAVIVDLRTQVLDV 72
+ + +++L +AI +V E E+AVI R G+ GPGL F P +K ++ +
Sbjct: 80 LAILAVLWLYNAIYVVDEQEQAVILRFGKYYETVGPGLNFYFPPIDKRFQENVTRERAYS 139
Query: 73 PVQETITKDNVPVRVNAVVYFRVVDPVKAVTQVKNYIMATSQISQTTLRSVIGQAHLDEL 132
+ +T+D V V V +++ + V V ++ Q +++ LR V G +D +
Sbjct: 140 KQGQMLTEDENIVEVPLTVQYKISNLQDFVLNVDQPEVSLQQATESALRHVAGSTTMDRI 199
Query: 133 LSE-----RDKLNMQLQRIIDEATDPWGIKVTAVEIKDVELPAGMQRAMAKQAEAERERR 187
L+E ++ +LQR +D T GI VT V I+ + P +Q A A + +
Sbjct: 200 LTEGREQMATEVRERLQRFLD--TYRTGITVTQVNIQSAQAPREVQEAFDDVIRAREDEQ 257
Query: 188 ARITLAEAERQAA--EKLREAAEIISE 212
AEA E +A II E
Sbjct: 258 REKNQAEAYANGVVPEARGQAQRIIEE 284
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.321 0.135 0.358
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 75885848
Number of Sequences: 2977
Number of extensions: 2704947
Number of successful extensions: 12581
Number of sequences better than 1.0e-10: 87
Number of HSP's better than 0.0 without gapping: 81
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 12384
Number of HSP's gapped (non-prelim): 112
length of query: 268
length of database: 189,106,746
effective HSP length: 62
effective length of query: 206
effective length of database: 152,000,552
effective search space: 31312113712
effective search space used: 31312113712
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.9 bits)
S2: 164 (68.3 bits)