BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB1945 (PAB1945) DE:ATP-BINDING PROTEIN
(335 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|Q9V103|YJ45_PYRAB HYPOTHETICAL ATP-BINDING PROTEIN PAB1945 >g... 663 0.0
sp|Q9V050|Y634_PYRAB HYPOTHETICAL ATP-BINDING PROTEIN PAB0634 >g... 434 e-121
sp|O58276|Y541_PYRHO HYPOTHETICAL ATP-BINDING PROTEIN PH0541 >gi... 339 4e-92
sp|Q59053|YG59_METJA HYPOTHETICAL ATP-BINDING PROTEIN MJ1659 >gi... 323 2e-87
sp|Q9UZE8|Y800_PYRAB HYPOTHETICAL ATP-BINDING PROTEIN PAB0800 >g... 308 7e-83
sp|Q60380|Y074_METJA HYPOTHETICAL ATP-BINDING PROTEIN MJ0074 >gi... 277 2e-73
sp|Q57881|Y439_METJA HYPOTHETICAL ATP-BINDING PROTEIN MJ0439 >gi... 272 4e-72
sp|Q58049|Y632_METJA HYPOTHETICAL ATP-BINDING PROTEIN MJ0632 >gi... 270 2e-71
sp|Q58697|YD01_METJA HYPOTHETICAL ATP-BINDING PROTEIN MJ1301 >gi... 257 9e-68
sp|Q58416|YA10_METJA HYPOTHETICAL ATP-BINDING PROTEIN MJ1010 >gi... 256 2e-67
sp|Q57611|Y147_METJA HYPOTHETICAL ATP-BINDING PROTEIN MJ0147 >gi... 242 5e-63
sp|Q60388|Y075_METJA HYPOTHETICAL ATP-BINDING PROTEIN MJ0075 >gi... 238 5e-62
sp|Q58211|Y801_METJA HYPOTHETICAL ATP-BINDING PROTEIN MJ0801 >gi... 229 3e-59
gi|10954506 M. jannaschii predicted coding region MJECL15 [Metha... 215 6e-55
sp|Q59004|YG09_METJA HYPOTHETICAL ATP-BINDING PROTEIN MJ1609 >gi... 214 1e-54
sp|Q58042|Y625_METJA HYPOTHETICAL ATP-BINDING PROTEIN MJ0625 >gi... 168 7e-41
gi|10954515 M. jannaschii predicted coding region MJECL26 [Metha... 166 3e-40
sp|Q58412|YA06_METJA HYPOTHETICAL ATP-BINDING PROTEIN MJ1006 >gi... 160 2e-38
gi|10954505 M. jannaschii predicted coding region MJECL14 [Metha... 157 1e-37
sp|Q58476|YA76_METJA HYPOTHETICAL ATP-BINDING PROTEIN MJ1076 >gi... 152 4e-36
>sp|Q9V103|YJ45_PYRAB HYPOTHETICAL ATP-BINDING PROTEIN PAB1945 >gi|7514286|pir||E75183
ATP-binding protein PAB1945 - Pyrococcus abyssi (strain
Orsay) >gi|5458058|emb|CAB49548.1| (AJ248284)
ATP-BINDING PROTEIN [Pyrococcus abyssi]
Length = 335
Score = 663 bits (1691), Expect = 0.0
Identities = 335/335 (100%), Positives = 335/335 (100%)
Query: 1 MFFDREKELSKLLKIIESEPSLITFIYGPINSGKTALIQEFIRKMPDHYVAFYINLRATP 60
MFFDREKELSKLLKIIESEPSLITFIYGPINSGKTALIQEFIRKMPDHYVAFYINLRATP
Sbjct: 1 MFFDREKELSKLLKIIESEPSLITFIYGPINSGKTALIQEFIRKMPDHYVAFYINLRATP 60
Query: 61 ITKYEDFIDILFSIEFENPIKNLKEALSLVISAGKEILGIPIPNDFLKQILSENKPKNAF 120
ITKYEDFIDILFSIEFENPIKNLKEALSLVISAGKEILGIPIPNDFLKQILSENKPKNAF
Sbjct: 61 ITKYEDFIDILFSIEFENPIKNLKEALSLVISAGKEILGIPIPNDFLKQILSENKPKNAF 120
Query: 121 LYITKLLTEVKRRGKRPILILDELQVIGDLRINGPLIYEIFNFFIHLTKEAHLSHVFTIT 180
LYITKLLTEVKRRGKRPILILDELQVIGDLRINGPLIYEIFNFFIHLTKEAHLSHVFTIT
Sbjct: 121 LYITKLLTEVKRRGKRPILILDELQVIGDLRINGPLIYEIFNFFIHLTKEAHLSHVFTIT 180
Query: 181 SDSLFMERIYSEAMLQGRADYFLVDDFDEKTALNFLKSQGLTEEEANLALEYFGGKPPYL 240
SDSLFMERIYSEAMLQGRADYFLVDDFDEKTALNFLKSQGLTEEEANLALEYFGGKPPYL
Sbjct: 181 SDSLFMERIYSEAMLQGRADYFLVDDFDEKTALNFLKSQGLTEEEANLALEYFGGKPPYL 240
Query: 241 IEAIKHREELEDYCKKALAMRTRQVYSFAYGKRRIIKLLTEFKNKEEVPFTGKVTRTLEE 300
IEAIKHREELEDYCKKALAMRTRQVYSFAYGKRRIIKLLTEFKNKEEVPFTGKVTRTLEE
Sbjct: 241 IEAIKHREELEDYCKKALAMRTRQVYSFAYGKRRIIKLLTEFKNKEEVPFTGKVTRTLEE 300
Query: 301 AVKANILFVDPLNGIIKPQGRLELLAIREALRMLT 335
AVKANILFVDPLNGIIKPQGRLELLAIREALRMLT
Sbjct: 301 AVKANILFVDPLNGIIKPQGRLELLAIREALRMLT 335
>sp|Q9V050|Y634_PYRAB HYPOTHETICAL ATP-BINDING PROTEIN PAB0634 >gi|7517902|pir||C75069
hypothetical protein PAB0634 - Pyrococcus abyssi (strain
Orsay) >gi|5458368|emb|CAB49856.1| (AJ248286)
hypothetical protein [Pyrococcus abyssi]
Length = 339
Score = 434 bits (1104), Expect = e-121
Identities = 204/339 (60%), Positives = 269/339 (79%), Gaps = 6/339 (1%)
Query: 1 MFFDREKELSKLLKIIESEPSLITFIYGPINSGKTALIQEFIRKMPDHYVAFYINLRATP 60
MFF+RE+EL KLL+++ +EP+LITF+YGPINSGKTAL+ EFI+K+PD ++AFYINLR TP
Sbjct: 1 MFFNRERELEKLLRLVSTEPNLITFVYGPINSGKTALMMEFIKKLPDDHIAFYINLRRTP 60
Query: 61 ITKYEDFIDILFSIEFENPIKNLKEALSLVISAGKEILGIPIPNDFLKQILSENKPKNAF 120
IT Y DF+D+LFS+EF N +K LKEA+SLV+SAGKE G P+P + L +I E KPKNAF
Sbjct: 61 ITSYSDFVDVLFSVEFRNKVKTLKEAVSLVLSAGKETFGFPVPTELLARITKEKKPKNAF 120
Query: 121 LYITKLLTEVKRRGKRPILILDELQVIGDLRINGPLIYEIFNFFIHLTKEAHLSHVFTIT 180
YI L+ EV++ GKRPILILDELQVIGDL+++G LIYE+FNFFIHLTKE+HLSHVF +T
Sbjct: 121 AYIVTLMEEVRKAGKRPILILDELQVIGDLKVDGSLIYELFNFFIHLTKESHLSHVFVVT 180
Query: 181 SDSLFMERIYSEAMLQGRADYFLVDDFDEKTALNFLKSQGLTEEEANLALEYFGGKPPYL 240
SDSLF+ER+YSEAMLQGRA+YFLVDDF +TAL FLK+ GL+++EA L YFGGKP YL
Sbjct: 181 SDSLFIERVYSEAMLQGRAEYFLVDDFKRETALRFLKNNGLSDDEAELVWNYFGGKPVYL 240
Query: 241 IEAIKHREELEDYCKKALAMRTRQVYSFAYGK-----RRIIKLLTEFKNKEEVPFTGKVT 295
E IKHR+EL+++C++ L +RT Q+ Y +++KL F+ +E VP+ ++
Sbjct: 241 AETIKHRDELKEWCERMLKLRTSQILDELYALEKELFEKVVKLFFAFEKQESVPYR-SLS 299
Query: 296 RTLEEAVKANILFVDPLNGIIKPQGRLELLAIREALRML 334
+ AVK NILF +P++ +++PQGRLELLAI+ L ++
Sbjct: 300 EEILWAVKRNILFAEPVDRVLRPQGRLELLAIKRILDII 338
>sp|O58276|Y541_PYRHO HYPOTHETICAL ATP-BINDING PROTEIN PH0541 >gi|7518700|pir||A71168
hypothetical protein PH0541 - Pyrococcus horikoshii
>gi|3256947|dbj|BAA29630.1| (AP000002) 321aa long
hypothetical protein [Pyrococcus horikoshii]
Length = 321
Score = 339 bits (859), Expect = 4e-92
Identities = 172/335 (51%), Positives = 235/335 (69%), Gaps = 18/335 (5%)
Query: 1 MFFDREKELSKLLKIIESEPSLITFIYGPINSGKTALIQEFIRKMPDHYVAFYINLRATP 60
MFFDRE+E+ +LL+ I EP+++TF+YGPINSGKT LIQEF+++ + YV FYIN R TP
Sbjct: 1 MFFDREEEIERLLEDISYEPNMVTFVYGPINSGKTTLIQEFLKRTSEKYVGFYINFRKTP 60
Query: 61 ITKYEDFIDILFSIEFENPIKNLKEALSLVISAGKEILGIPIPNDFLKQILSENKPKNAF 120
+ YE+F +LFS F++ IK +K+ +S++ GK IPIP + L IL + +P NAF
Sbjct: 61 VANYEEFSRVLFS--FDSRIKMIKDVISIL---GKVNPWIPIPREVLNDILRDKEPINAF 115
Query: 121 LYITKLLTEVKRRGKRPILILDELQVIGDLRINGPLIYEIFNFFIHLTKEAHLSHVFTIT 180
Y+ ++L E++ GK PIL+ DELQVI DL++NG LIY++FNF IHL+KEAHL+HVF +T
Sbjct: 116 SYLREVLEEIRSSGKMPILVFDELQVIKDLKVNGSLIYQLFNFLIHLSKEAHLAHVFAVT 175
Query: 181 SDSLFMERIYSEAMLQGRADYFLVDDFDEKTALNFLKSQGLTEEEANLALEYFGGKPPYL 240
SDSLF+ I+ A L GRA YF V D E+ A+ FL L+EEE+ L +EYFGGKP YL
Sbjct: 176 SDSLFISEIFGNAKLSGRASYFPVYDLPEEKAIEFLLRLNLSEEESRLVVEYFGGKPSYL 235
Query: 241 IEAIKHREELEDYCKKALAMRTRQVYSFAYGKRRIIKLLTEFKNKEEVPFTGKVTRTLEE 300
+EA KHR+ L ++C++ L +R R++ F LL EF ++EEV +V EE
Sbjct: 236 VEAPKHRKHLREWCERELTLRAREIRRFK------SNLLLEFMDEEEV----EVEELSEE 285
Query: 301 A---VKANILFVDPLNGIIKPQGRLELLAIREALR 332
A V ANILF DPL G ++PQG+LELLAIR+ ++
Sbjct: 286 AINLVNANILFYDPLRGTLRPQGKLELLAIRKVIK 320
>sp|Q59053|YG59_METJA HYPOTHETICAL ATP-BINDING PROTEIN MJ1659 >gi|2129000|pir||A64507
hypothetical protein MJ1659 - Methanococcus jannaschii
>gi|1592240|gb|AAB99686.1| (U67606) M. jannaschii
predicted coding region MJ1659 [Methanococcus
jannaschii]
Length = 361
Score = 323 bits (819), Expect = 2e-87
Identities = 174/351 (49%), Positives = 234/351 (66%), Gaps = 22/351 (6%)
Query: 2 FFDREKELSKLLKIIESEPSLITFIYGPINSGKTALIQEFIRKMPDH--YVAFYINLRAT 59
FFDREKE++ L+K++ EP+LI FIYGPINSGKT LI+ I D YV FYINLR
Sbjct: 7 FFDREKEINYLVKVLSFEPNLIYFIYGPINSGKTTLIKHIIENKLDRDKYVVFYINLREH 66
Query: 60 PITKYEDFIDILFSIEFENPIKNLKE-ALSLVISAGKEI-------LGIPIPNDFLKQIL 111
I+KYEDFI++LF+ E I+ LK+ LS + K I GIP+P + L + L
Sbjct: 67 FISKYEDFIEVLFNTYEETFIEKLKKYLLSFINDLPKNIDVKSTILTGIPVPKNTLNEFL 126
Query: 112 SENKPKNAFLYITKLLTEVKRRGKRPILILDELQVIGDLRINGPLIYEIFNFFIHLTKEA 171
S +N F Y+TK+ ++K++GK+PILI+DELQ IGDL+ING LIYE+FNFFI LTKE
Sbjct: 127 STKNSENVFEYLTKIFEDIKKKGKQPILIIDELQKIGDLKINGFLIYELFNFFIDLTKEK 186
Query: 172 HLSHVFTITSDSLFMERIYSEAMLQGRADYFLVDDFDEKTALNFLKSQGLTEEEANLALE 231
HL HV ++SDSLF+ER+Y+E L+ R Y+LVDDFD KT FLK +EE ++
Sbjct: 187 HLCHVLCLSSDSLFIERVYNEGTLKDRCKYYLVDDFDYKTTKAFLKKHNFNDEEIDIVWH 246
Query: 232 YFGGKPPYLIEAIKHR---EELEDYCKKALAMRTRQVYSFAYGK--------RRIIKLLT 280
YFGGKP L+EAI+ + E+++++CKK+L +R RQ+ Y R+IKL
Sbjct: 247 YFGGKPIKLVEAIQEKLLGEDVKEFCKKSLRVRKRQLKDLLYSLEDDNKELFERVIKLFE 306
Query: 281 EFKNKEEVPFTGKVTRTLEEAVKANILFVDPLNGIIKPQGRLELLAIREAL 331
FKN++E+ F K++ + VK NILFV+ GI+KPQ +L+LLAIRE L
Sbjct: 307 NFKNRDEI-FYEKISEEIVWTVKKNILFVNIEEGILKPQSKLDLLAIREIL 356
>sp|Q9UZE8|Y800_PYRAB HYPOTHETICAL ATP-BINDING PROTEIN PAB0800 >gi|7520929|pir||B75101
probable ATP-binding protein PAB0800 - Pyrococcus abyssi
(strain Orsay) >gi|5458623|emb|CAB50111.1| (AJ248286)
hypothetical ATP-BINDING PROTEIN [Pyrococcus abyssi]
Length = 326
Score = 308 bits (780), Expect = 7e-83
Identities = 167/341 (48%), Positives = 228/341 (65%), Gaps = 26/341 (7%)
Query: 1 MFFDREKELSKLLKIIESEPSLITFIYGPINSGKTALIQEFIRKMPDHYVAFYINLRATP 60
MFFDREKEL +L ++ S+PS+ITF YGPINSGKT L+ EF +++P Y+ F INLR
Sbjct: 1 MFFDREKELEELTDLVSSKPSMITFTYGPINSGKTTLLIEFSKRLPREYIVFNINLRGRF 60
Query: 61 ITKYEDFIDILFSIEFENP-IKNLKEALSLVISAGKEILGIPIPNDFLKQILSENKPKNA 119
I + +DFI +LF + E+ IKN + GIPIP L +IL +N
Sbjct: 61 IREEKDFIKVLFMKKEESESIKNSYK-------------GIPIPEGILNEIL-----ENP 102
Query: 120 FLYITKLLTEVKRRGKRPILILDELQVIGDLRINGPLIYEIFNFFIHLTKEAHLSHVFTI 179
FL++ + E+ G+ P+LILDELQVIGDLRI+ LIY++FNFF+ LTKE HL+HVF
Sbjct: 103 FLFLEEYFEEINNSGRIPVLILDELQVIGDLRIDDLLIYKLFNFFVRLTKELHLAHVFVA 162
Query: 180 TSDSLFMERIYSEAMLQGRADYFLVDDFDEKTALNFLKSQGLTEEEANLALEYFGGKPPY 239
TSDSLF+ER++ EAML GR+ + LVDDFDE+T L FL S GL+EEEA +A Y GGKP Y
Sbjct: 163 TSDSLFLERVHGEAMLHGRSRFMLVDDFDERTTLEFLTSNGLSEEEAKIAWHYLGGKPSY 222
Query: 240 LIEAI-KHREELEDYCKKALAMRTRQVYSFAY---GK--RRIIKLLTEFKNKEEVPFTGK 293
L++ + + R +EDYCK+AL RT Q+ Y G+ R++I+LL++F+ +E+ + G
Sbjct: 223 LVDLLQRSRIRVEDYCKEALKWRTSQILDSLYTLKGRKLRKVIELLSKFRENDEITY-GP 281
Query: 294 VTRTLEEAVKANILFVDPLNGIIKPQGRLELLAIREALRML 334
++ + +V+ NILF DP ++PQGRLE AI AL L
Sbjct: 282 LSEEIVWSVRNNILFADPRERKLRPQGRLEKHAIELALEKL 322
>sp|Q60380|Y074_METJA HYPOTHETICAL ATP-BINDING PROTEIN MJ0074 >gi|2128114|pir||B64309
hypothetical protein MJ0074 - Methanococcus jannaschii
>gi|1590860|gb|AAB98056.1| (U67464) M. jannaschii
predicted coding region MJ0074 [Methanococcus
jannaschii]
Length = 358
Score = 277 bits (700), Expect = 2e-73
Identities = 162/361 (44%), Positives = 217/361 (59%), Gaps = 36/361 (9%)
Query: 2 FFDREKELSKLLKIIESEPSLITFIYGPINSGKTALIQEFI--RKMPDHYVAFYINLRAT 59
FFDREKE++++L I+ EP + FIYGPINSGKTALI E I R D YV FY +LR
Sbjct: 3 FFDREKEIAEILHILNREPDDVYFIYGPINSGKTALINEIINNRLDKDKYVVFYFDLREI 62
Query: 60 PITKYEDFIDILFSIEFENPIKNLKEALSLVISAGKEILGIPIPNDFLKQILSENKPKNA 119
I+KY+DFI++LF E+E K + E + +I + GIP P + L++IL + KN
Sbjct: 63 FISKYDDFIEVLFE-EYEGNKKPV-EIIKSLIKDVPSLCGIPAPKNTLEEILKKKTTKNV 120
Query: 120 FLYITKLLTEVKRRGKRPILILDELQVIGDLRINGPLIYEIFNFFIHLTKEAHLSHVFTI 179
F YITK+L ++K+ GK+PILI+DELQ IGD++ING LIYE+FN+F+ LTK HL HVF +
Sbjct: 121 FRYITKVLMDIKKEGKQPILIIDELQKIGDMKINGFLIYELFNYFVSLTKHKHLCHVFCL 180
Query: 180 TSDSLFMERIYSEAMLQGRADYFLVDDFDEKTALNFL------KSQGLTEEEANLALEYF 233
+SDSLF+ER+Y+EAML GRA Y LVDDFD++TAL F+ + LT E+ L Y
Sbjct: 181 SSDSLFIERVYNEAMLDGRAKYLLVDDFDKETALKFMDFLAKENNISLTNEDKELIYNYV 240
Query: 234 GGKP---PYLIEAIKHRE--------------------ELEDYCKKALAMRTRQVYSFAY 270
GGKP Y++E ++ E+ DY K + + +
Sbjct: 241 GGKPKDIKYVVEESNFKDLKEVLDYLLNDEISKLDMFLEILDYSKPRVEVGNEVI---EI 297
Query: 271 GKRRIIKLLTEFKNKEEVPFTGKVTRTLEEAVKANILFVDPLNGIIKPQGRLELLAIREA 330
K IIK L FK+K E+P T VK NILF++P I+KPQ L AI+
Sbjct: 298 NKEDIIKALRLFKDKYEIPKKDIPTPVYVYLVKENILFLNPQKRILKPQSYLVWNAIKRL 357
Query: 331 L 331
L
Sbjct: 358 L 358
>sp|Q57881|Y439_METJA HYPOTHETICAL ATP-BINDING PROTEIN MJ0439 >gi|2128324|pir||G64354
hypothetical protein MJ0439 - Methanococcus jannaschii
>gi|1591143|gb|AAB98434.1| (U67495) M. jannaschii
predicted coding region MJ0439 [Methanococcus
jannaschii]
Length = 361
Score = 272 bits (688), Expect = 4e-72
Identities = 156/352 (44%), Positives = 222/352 (62%), Gaps = 27/352 (7%)
Query: 2 FFDREKELSKLLKIIESEPSLITFIYGPINSGKTALIQEFIRKMPDH--YVAFYINLRAT 59
FF+REKE++++L I+E P L+ F+YGP+NSGKTALI E I D YV FYINLR
Sbjct: 15 FFNREKEITEILSILEGNPDLVYFVYGPLNSGKTALISEIINNRIDKNKYVVFYINLRGI 74
Query: 60 PITKYEDFIDILFSIEFENPIKNLKEALSLVISAGKEILGIPIPNDFLKQILSENKPKNA 119
I+KY+DFI++LF E+E K + E + +I + GIP P + L++IL + KN
Sbjct: 75 FISKYKDFIEVLFE-EYEEDRKPV-EIIKSLIKDVPSLCGIPTPKNTLEEILKKKTTKNV 132
Query: 120 FLYITKLLTEVKRRGKRPILILDELQVIGDLRINGPLIYEIFNFFIHLTKEAHLSHVFTI 179
F YIT +L ++K+ GK+PI+I+DELQ IGD++ING LIYE+FN+F+ LTKE HL HVF +
Sbjct: 133 FKYITNVLMDIKKEGKQPIIIIDELQKIGDMKINGFLIYELFNYFVDLTKELHLCHVFCL 192
Query: 180 TSDSLFMERIYSEAMLQGRADYFLVDDFDEKTALNFLK-------SQGLTEEEANLALEY 232
+SDSLF+E++YSEAML+ R DY LVDDFD++TAL F+ ++ L+++E L Y
Sbjct: 193 SSDSLFIEQVYSEAMLKDRVDYILVDDFDKETALKFMDFLAEEILNKKLSDDEKELIYSY 252
Query: 233 FGGKPPYLIEAIKH------REELEDYCK------KALAMRTRQVYSFAYGKRRIIKLLT 280
GGKP +I+ IK +E L++ + K ++ +Y K I L
Sbjct: 253 VGGKPILIIKVIKKLKIKGLKETLDEMLRDEMQKLKYFLEDIKEKDEESYNK--IADALE 310
Query: 281 EFKNKEEVPFTGKVTRTLEE-AVKANILFVDPLNGIIKPQGRLELLAIREAL 331
FK+ E+ K+ + + E VK NILF++P G +KPQ L AI+ L
Sbjct: 311 IFKDSYEIEDI-KIPKNIREFLVKKNILFLNPQKGTLKPQSYLVWNAIKRLL 361
>sp|Q58049|Y632_METJA HYPOTHETICAL ATP-BINDING PROTEIN MJ0632 >gi|2128418|pir||H64378
hypothetical protein MJ0632 - Methanococcus jannaschii
>gi|1591343|gb|AAB98624.1| (U67510) replication
initiator protein, putative (dnaA) [Methanococcus
jannaschii]
Length = 363
Score = 270 bits (683), Expect = 2e-71
Identities = 158/363 (43%), Positives = 219/363 (59%), Gaps = 35/363 (9%)
Query: 2 FFDREKELSKLLKIIESEPSLITFIYGPINSGKTALIQEFI--RKMPDHYVAFYINLRAT 59
FF+REKE+ ++L IIESEP I FI+G INSGKTALI E I R D YV FY +LR
Sbjct: 3 FFNREKEIEEILHIIESEPQRINFIFGSINSGKTALINEIINNRLNKDKYVVFYFDLREI 62
Query: 60 PITKYEDFIDILFSIEFENP-IKNLKEALSLVISAGKEIL-------------GIPIPND 105
I+KY+DFI++LF E+E P I +K +I +++ IPIP +
Sbjct: 63 FISKYDDFIEVLFE-EYEEPFIDKVKRLFLSLIKDYPDVIKSYALLNITGVVDSIPIPKN 121
Query: 106 FLKQILSENKPKNAFLYITKLLTEVKRRGKRPILILDELQVIGDLRINGPLIYEIFNFFI 165
L ++L + KN F YIT +L ++KR GK+PI+I+DELQ IGDL++NG LIYE+FN+F+
Sbjct: 122 TLNELLKKRNVKNVFRYITSVLIKIKREGKQPIIIIDELQKIGDLKLNGFLIYELFNYFV 181
Query: 166 HLTKEAHLSHVFTITSDSLFMERIYSEAMLQGRADYFLVDDFDEKTALNFL------KSQ 219
LTK HL HVF ++SDSLF+ER+Y+EAML+GR Y LVDDFD +TAL F+ +
Sbjct: 182 SLTKHKHLCHVFCLSSDSLFIERVYNEAMLEGRCKYILVDDFDRETALKFMDFLAKENNI 241
Query: 220 GLTEEEANLALEYFGGKP---PYLIEAIKHREELEDYCKKALAMRTRQVYSFAYG----- 271
LT E+ L Y GGKP Y+I +K++ +LED L T+++ F
Sbjct: 242 NLTNEDKELIYNYVGGKPIDIIYVINEMKYK-KLEDILTSMLKEETQKLKYFLENVKEED 300
Query: 272 ---KRRIIKLLTEFKNKEEVPFTGKVTRTLEEAVKANILFVDPLNGIIKPQGRLELLAIR 328
++++ L FK+ E+ + E VK NILF++P+ G +KPQ L AI+
Sbjct: 301 EELYKKVVDALKIFKDSYEIEDIKIPKKLREFLVKKNILFLNPIEGTLKPQSFLVWNAIK 360
Query: 329 EAL 331
L
Sbjct: 361 RIL 363
>sp|Q58697|YD01_METJA HYPOTHETICAL ATP-BINDING PROTEIN MJ1301 >gi|2128773|pir||D64462
hypothetical protein MJ1301 - Methanococcus jannaschii
>gi|1592328|gb|AAB99326.1| (U67571) M. jannaschii
predicted coding region MJ1301 [Methanococcus
jannaschii]
Length = 400
Score = 257 bits (651), Expect = 9e-68
Identities = 157/393 (39%), Positives = 216/393 (54%), Gaps = 65/393 (16%)
Query: 2 FFDREKELSKLLKIIESEPSLITFIYGPINSGKTALIQEFIRKMPDH--YVAFYINLRAT 59
FF+REKE+ K+L IIE EP+LI FIYG INSGKTALI E I D Y+ FY +LR
Sbjct: 10 FFNREKEIHKILSIIEGEPNLIYFIYGSINSGKTALINEIINNRLDKNKYIVFYFDLREI 69
Query: 60 PITKYEDFIDILFSIEFENPIKNLKEALSLVISAGKEILGIPIPNDFLKQILSENKPKNA 119
I+KY+DFI++LF E+E K+ E + +I+ + GIPIP + L +I + KN
Sbjct: 70 FISKYDDFIEVLFE-EYEGD-KSPIEVIKAIINDLPSLYGIPIPKNTLNEIFKKKTTKNV 127
Query: 120 FLYITKLLTEVKRRGKRPILILDELQVIGDLRINGPLIYEIFNFFIHLTKEAHLSHVFTI 179
F YIT +L ++KR GK+PI+I+DELQ IGD++ING LIYE+FN+F+ LTK HL HVF +
Sbjct: 128 FRYITNVLMDIKREGKQPIIIIDELQKIGDMKINGFLIYELFNYFVSLTKHKHLCHVFCL 187
Query: 180 TSDSLFMERIYSEAMLQGRAD--------------------------------------- 200
+SDSLF+ER+Y+EAML+ R D
Sbjct: 188 SSDSLFIERVYNEAMLEDRVDYILVDDHRGGYAPSIGILPQIESGVAFGNPALEYSNRGF 247
Query: 201 ------YFLVDDFDEKTALNFL------KSQGLTEEEANLALEYFGGKPPYLIEAIK--H 246
Y LVDDFD++TAL F+ + LT E+ L Y GGKP +I+ I
Sbjct: 248 ASMRGEYILVDDFDKETALKFMDFLAKENNMSLTNEDKELIYNYVGGKPVLIIKVIDKLR 307
Query: 247 REELEDYCKKALAMRTRQVYSFAYG--------KRRIIKLLTEFKNKEEVPFTGKVTRTL 298
E L D L T+++ F ++++ L FK E+ +
Sbjct: 308 YENLNDILDFMLKDATQKLKYFLEDVKEEDEELYKKVVDALKLFKEDYEIEDIKIPKKIR 367
Query: 299 EEAVKANILFVDPLNGIIKPQGRLELLAIREAL 331
E +K NILF++P+ GI+KPQ L AI++ L
Sbjct: 368 EFLIKRNILFLNPIEGILKPQSFLVWNAIKKVL 400
>sp|Q58416|YA10_METJA HYPOTHETICAL ATP-BINDING PROTEIN MJ1010 >gi|2128629|pir||A64426
hypothetical protein MJ1010 - Methanococcus jannaschii
>gi|1591669|gb|AAB99015.1| (U67543) M. jannaschii
predicted coding region MJ1010 [Methanococcus
jannaschii]
Length = 377
Score = 256 bits (648), Expect = 2e-67
Identities = 158/375 (42%), Positives = 215/375 (57%), Gaps = 48/375 (12%)
Query: 2 FFDREKELSKLLKIIESEPSLITFIYGPINSGKTALIQEFIRKMPDH--YVAFYINLRAT 59
FF+R +E+ ++L I+E EP+LI FIYGPINSGKTALI E I D YV FYI+LR
Sbjct: 6 FFNRVEEIKEILSILEEEPNLIYFIYGPINSGKTALINEIINNRLDKNKYVVFYIDLREI 65
Query: 60 PITKYEDF---------------IDILFSIEFENPIKNLKEALSLVISAGKEILGIPIPN 104
I+KY++F I++LF E+E+ K ++ SL+ A + GIP P
Sbjct: 66 FISKYDEFEAKLRATKTFGFRLIIEVLFE-EYEDDKKPIEIIRSLIKDA-PSLCGIPTPK 123
Query: 105 DFLKQILSENKPKNAFLYITKLLTEVKRRGKRPILILDELQVIGDLRINGPLIYEIFNFF 164
+ L++IL + KN F YIT +L ++KR GK+PI+I+DELQ IGD++ING LIYE+FN+F
Sbjct: 124 NTLEEILKKKTTKNVFKYITNILMDIKREGKQPIIIIDELQKIGDMKINGFLIYELFNYF 183
Query: 165 IHLTKEAHLSHVFTITSDSLFMERIYSEAMLQGRADYFLVDDFDEKTALNFLK------- 217
+ LTK HL HVF ++SDSLF+ER+Y+EAML+ R DY LVDDFD++TAL F+
Sbjct: 184 VSLTKHKHLCHVFCLSSDSLFIERVYNEAMLKERVDYILVDDFDKETALKFIDFLSEEIL 243
Query: 218 SQGLTEEEANLALEYFGGKPPYLIEAI---KHREELEDYCKKALAMRTRQVYSFAYG--- 271
++ L++E+ L Y GGKP +I I KH+ L+D L ++ F
Sbjct: 244 NKKLSDEDKELIYSYVGGKPILIINVIGKLKHK-NLKDVLNILLMDEISKLKDFLSNLDY 302
Query: 272 ---------------KRRIIKLLTEFKNKEEVPFTGKVTRTLEEAVKANILFVDPLNGII 316
K II L FK K E+ VK NILF+ P G +
Sbjct: 303 IKPKVNIEEEIIEIRKEDIINALKLFKGKYEIEVDKIPKAVYVYLVKKNILFLYPQRGTL 362
Query: 317 KPQGRLELLAIREAL 331
KPQ L AI+ L
Sbjct: 363 KPQSFLVWNAIKRVL 377
>sp|Q57611|Y147_METJA HYPOTHETICAL ATP-BINDING PROTEIN MJ0147 >gi|2128154|pir||D64318
hypothetical protein MJ0147 - Methanococcus jannaschii
>gi|1590908|gb|AAB98139.1| (U67472) M. jannaschii
predicted coding region MJ0147 [Methanococcus
jannaschii]
Length = 371
Score = 242 bits (611), Expect = 5e-63
Identities = 152/365 (41%), Positives = 214/365 (57%), Gaps = 38/365 (10%)
Query: 2 FFDREKELSKLLKIIESEPSLITFIYGPINSGKTALIQEFIR-KMPDHYVAFYINLRATP 60
FF+REKE+ ++L I+E EP++I FIYGP+NSGKTALI+ I K+ D Y FYIN R
Sbjct: 7 FFNREKEIHEILSILEGEPNIIYFIYGPLNSGKTALIKHIIENKLSDDYKVFYINFRTYL 66
Query: 61 ITKYEDFIDILFSI---EFENPIKNLKEALSLVISAGKEILGIPIPN-DFLKQILSENKP 116
I++ +FI+ +F+ +F IK+ E L+L+ K + GIPIP +F K L E K
Sbjct: 67 ISEKREFIEAIFTTKKDDFFEKIKDKSEVLNLITKGAKILTGIPIPEVEFDK--LFEEKI 124
Query: 117 KNAFLYITKLLTEVKRRGKRPILILDELQVIGDLRINGP--LIYEIFNFFIHLTKEAHLS 174
+AF Y+ +L EVK+ GK+P+LILDELQ+I D+ +N L+ E+F F + LTKE HL
Sbjct: 125 NDAFQYLNSILLEVKKSGKQPVLILDELQMIKDVVLNWQKYLLKELFQFLVSLTKEQHLC 184
Query: 175 HVFTITSDSLFMERIYSEAMLQGRADYFLVDDFDEKTALNFLK-------SQGLTEEEAN 227
HVF ++SDSLF+E +YS L+GRA Y LVDDFD++TAL F+ ++ L++E+
Sbjct: 185 HVFCLSSDSLFIEYVYSAGELEGRAKYLLVDDFDKETALKFMDFLAKEILNKKLSDEDKE 244
Query: 228 LALEYFGGKPPYL---IEAIKHREELEDYCKKALAMRTRQVYSF---------------- 268
L Y GGKP Y+ I+ +++R +LED L T+++ F
Sbjct: 245 LIYNYVGGKPVYIYSVIDEMRYR-KLEDILNLMLKEETQKLKYFLKELDYIKPKVELKDE 303
Query: 269 --AYGKRRIIKLLTEFKNKEEVPFTGKVTRTLEEAVKANILFVDPLNGIIKPQGRLELLA 326
K II L FK EV VK NILF++P+ GI+KPQ L A
Sbjct: 304 IIEIKKDDIINALKLFKENYEVSDDDIPEPVYIYLVKKNILFLNPIEGILKPQSFLIWNA 363
Query: 327 IREAL 331
I++ L
Sbjct: 364 IKKLL 368
>sp|Q60388|Y075_METJA HYPOTHETICAL ATP-BINDING PROTEIN MJ0075 >gi|2128115|pir||C64309
hypothetical protein MJ0075 - Methanococcus jannaschii
>gi|1590862|gb|AAB98065.1| (U67465) M. jannaschii
predicted coding region MJ0075 [Methanococcus
jannaschii]
Length = 365
Score = 238 bits (602), Expect = 5e-62
Identities = 139/359 (38%), Positives = 210/359 (57%), Gaps = 30/359 (8%)
Query: 2 FFDREKELSKLLKIIESEPSLITFIYGPINSGKTALIQEFIRKMPDH--YVAFYINLRAT 59
FFDRE+E++++L I++ P I FIYGPINSGKT L+ E I ++ D Y FY NLR
Sbjct: 5 FFDREREINEILGILDETPDNIYFIYGPINSGKTTLMMEIINRLKDDKKYRIFYYNLRGV 64
Query: 60 PITKYEDFIDILFSIEFENPIKNLKEALSLVISAGKEIL--------GIPIPNDFLKQIL 111
I+ Y DF DI+F I +N K + + +++ K I I +P+D K IL
Sbjct: 65 RISSYSDFFDIMFEIREDNKFKQMVKDADVLVEGIKFIEKTAKLFNESIILPSDLAKVIL 124
Query: 112 SENKPKNAFLYITKLLTEVKRRGKRPILILDELQVIGDLRINGPLIYEIFNFFIHLTKEA 171
S+ K + F Y+ ++ E+ ++G +P++I+DELQ + L+ NG LI ++FNFF+ LTKE
Sbjct: 125 SKQKGFDVFRYLERVFREMNKKGLKPVIIIDELQRLKGLKSNGELIDDLFNFFVRLTKEL 184
Query: 172 HLSHVFTITSDSLFMERIYSEAMLQGRADYFLVDDFDEKTALNFLK-------SQGLTEE 224
H++H F ++SDSLF+E +Y A L+GRADY LVDDFD++TAL F+ + L+E+
Sbjct: 185 HITHCFCLSSDSLFIEYVYDRAELRGRADYILVDDFDKETALKFMDFLSEDILGRKLSED 244
Query: 225 EANLALEYFGGKPPYLIEAI---KHREELEDYCKKALAMRTRQVYSFAYGKR-------- 273
E L Y GGKP + + I K +EL+D + L +++ F +
Sbjct: 245 EKELIYSYVGGKPKDVYDVIIKLKLGKELKDILEFMLKEEIQKLKYFLEDVKEDDEELYN 304
Query: 274 RIIKLLTEFKNKEEVPFTGKVTRTLEE-AVKANILFVDPLNGIIKPQGRLELLAIREAL 331
+I+ L FK E+ K+ + + E VK NILF++P+ G +KPQ L AI++ L
Sbjct: 305 KIVDALKIFKENYEIEDI-KIPKNIREFLVKKNILFLNPIEGTLKPQSFLVWNAIKKLL 362
>sp|Q58211|Y801_METJA HYPOTHETICAL ATP-BINDING PROTEIN MJ0801 >gi|2128513|pir||A64400
hypothetical protein MJ0801 - Methanococcus jannaschii
>gi|1499623|gb|AAB98799.1| (U67524) M. jannaschii
predicted coding region MJ0801 [Methanococcus
jannaschii]
Length = 379
Score = 229 bits (579), Expect = 3e-59
Identities = 151/379 (39%), Positives = 208/379 (54%), Gaps = 51/379 (13%)
Query: 2 FFDREKELSKLLKIIESEPSLITFIYGPINSGKTALIQEFIR-KMPDHYVAFYINLRATP 60
FFDRE+E++++L I+ EP I FIYGP+NSGKTALI+ I K+ D Y FYIN R
Sbjct: 3 FFDREREINEILHILNREPDDIYFIYGPLNSGKTALIKHIIENKLSDDYKVFYINFRTYL 62
Query: 61 ITKYEDFIDILFSI---EFENPIKNLKEALSLVISAGKEILGIPIPN-DFLKQILSENKP 116
I++ +FI+ +F+ +F IK+ E L+L+ + + GIPIP +F K L E K
Sbjct: 63 ISEKREFIEAIFTTKKDDFFEKIKDKDEVLNLITKGVRILTGIPIPEVEFDK--LFEEKI 120
Query: 117 KNAFLYITKLLTEVKRRGKRPILILDELQVIGDLRINGP------------------LIY 158
+AF Y+ LL EVK+ GK+PILI DELQ+I D+ +N L+
Sbjct: 121 NDAFQYLNSLLLEVKKSGKKPILIFDELQMIKDVVLNTENQRFSAFPSLRFGNGQKYLLK 180
Query: 159 EIFNFFIHLTKEAHLSHVFTITSDSLFMERIYSEAMLQGRADYFLVDDFDEKTALNFL-- 216
E+F F + LTKE HL HVF ++SDSLF+E +YS L+GRA Y LVDDFD++TAL F+
Sbjct: 181 ELFQFLVSLTKEQHLCHVFCLSSDSLFIEYVYSTGELEGRAKYLLVDDFDKETALKFMDF 240
Query: 217 ----KSQGLTEEEANLALEYFGGKP---PYLIEAIKH---REELEDYCKKALAMRTRQVY 266
+ LT E+ L Y GGKP Y++E K RE LE K A+ +
Sbjct: 241 LAVENNINLTNEDKELIYSYVGGKPKDIKYVVEESKFKDLREILEFMLKDAVQKLDMFLD 300
Query: 267 SFAYGKRR--------------IIKLLTEFKNKEEVPFTGKVTRTLEEAVKANILFVDPL 312
Y K + +I+ L FK++ EV +K NILF++P+
Sbjct: 301 MLNYSKPKVDVGDEVIEIKKDNVIEALKLFKDEYEVSKKHIPVPVYTYLIKRNILFLNPI 360
Query: 313 NGIIKPQGRLELLAIREAL 331
GI+KPQ L AI+ L
Sbjct: 361 EGILKPQSYLVWNAIKRLL 379
>gi|10954506 M. jannaschii predicted coding region MJECL15 [Methanococcus
jannaschii] >gi|2496257|sp|Q60277|YZ15_METJA
HYPOTHETICAL ATP-BINDING PROTEIN MJECL15
>gi|2129032|pir||G64511 hypothetical protein MJECL15 -
Methanococcus jannaschii plasmid pURB800
>gi|1522655|gb|AAC37088.1| (L77118) M. jannaschii
predicted coding region MJECL15 [Methanococcus
jannaschii]
Length = 365
Score = 215 bits (542), Expect = 6e-55
Identities = 136/366 (37%), Positives = 207/366 (56%), Gaps = 39/366 (10%)
Query: 2 FFDREKELSKLLKIIESEPSLITFIYGPINSGKTALIQEFIRKMPDH--YVAFYINLRAT 59
FF+REKE++++L I+E EP+ I FIYGP+NSGK+ LI+E I D Y+ F+I+ R
Sbjct: 3 FFNREKEINEILLILEEEPNNIYFIYGPLNSGKSTLIREVITNRLDKSKYIPFFIDFRTR 62
Query: 60 PITKYEDFIDILFSIEFENPIKNLKE----ALSLVISAGKEI----LGIPI--PNDFLKQ 109
I ++FI+ LF ++ ++ I + +E L++ +EI LG+PI P F +
Sbjct: 63 NILNVDNFIECLFEVDEKSKIDDFREYAKSLADLLVKGSEEISKYYLGMPIKVPKPFFDR 122
Query: 110 ILSE-NKPKNAFLYITKLLTEVKRRGKRPILILDELQVIGDLRINGP--LIYEIFNFFIH 166
I S+ +K + + YI L ++ +GK+PILI DELQ+I ++ +NG L++ +F F +
Sbjct: 123 IFSKRDKSADVYQYIEYLFAKLNEKGKKPILIFDELQMIREITLNGNRLLLWSLFQFLVA 182
Query: 167 LTKEAHLSHVFTITSDSLFMERIYSEAMLQGRADYFLVDDFDEKTALNFL------KSQG 220
LTK HL HVF ++SDSLF+E IY +A L+G DY LVDDFD+KTAL F+ K+
Sbjct: 183 LTKVQHLCHVFCLSSDSLFIEYIYGKAELKGGVDYILVDDFDKKTALKFMDFLAKQKNIN 242
Query: 221 LTEEEANLALEYFGGKPPYLIEAI--------------KHREELEDYCKKALAMRTRQVY 266
LT E+ L Y GGK Y+ + I EE ++ ++ L
Sbjct: 243 LTNEDKELIYSYVGGKAKYIYDVIVKLKAVKDLKYILETKLEEERNHLEELLEKVEEDYE 302
Query: 267 SFAYGKRRIIKLLTEFKNKEEVPFTGKVTRTLE-EAVKANILFVDPLNGIIKPQGRLELL 325
Y + +++ L FK+ E+P K+ R + +K NILF++P G +KPQ L
Sbjct: 303 GINYDE--VLEALKLFKDNYELP-KSKIKRKIRIFLIKENILFLNPQKGTLKPQSYLVWN 359
Query: 326 AIREAL 331
AI+ L
Sbjct: 360 AIKRML 365
>sp|Q59004|YG09_METJA HYPOTHETICAL ATP-BINDING PROTEIN MJ1609 >gi|2128966|pir||H64500
hypothetical protein MJ1609 - Methanococcus jannaschii
>gi|1500507|gb|AAB99636.1| (U67601) M. jannaschii
predicted coding region MJ1609 [Methanococcus
jannaschii]
Length = 374
Score = 214 bits (540), Expect = 1e-54
Identities = 136/372 (36%), Positives = 206/372 (54%), Gaps = 42/372 (11%)
Query: 2 FFDREKELSKLLKIIESEPSLITFIYGPINSGKTALIQEFIRKMPD--HYVAFYINLRAT 59
FF+REKE++K+L IIE EP+ I FIYG +NSGK+ L++E + D Y+ F+I+ R
Sbjct: 3 FFNREKEINKILSIIEGEPNNIYFIYGSLNSGKSTLMREIVVNRLDISKYIPFFIDFRTR 62
Query: 60 PITKYEDFIDILFSIEFENPIKNLKE----ALSLVISAGKEI----LGIPI--PNDFLKQ 109
I ++FI+ LF ++ ++ I + +E L++ +EI LG+PI P F +
Sbjct: 63 NILNVDNFIECLFEVDEKSEIDDFREYAKSLADLLVKGSEEISKYYLGMPIKIPKPFFDK 122
Query: 110 ILSE-NKPKNAFLYITKLLTEVKRRGKRPILILDELQVIGDLRING--PLIYEIFNFFIH 166
I ++ +K + + YI L ++ +GK+PILI DELQ+I ++ +NG L++ +F F +
Sbjct: 123 IFNKKDKSADVYQYIEYLFAKLNEKGKKPILIFDELQMIKEITLNGNRKLLWSLFQFLVA 182
Query: 167 LTKEAHLSHVFTITSDSLFMERIYSEAMLQGRADYFLVDDFDEKTALNFLK-------SQ 219
LTK HL HVF ++SDSLF+E +Y L+GRADY LVDDFD++TAL F+ ++
Sbjct: 183 LTKVQHLCHVFCLSSDSLFIEYVYKTGELEGRADYILVDDFDKQTALKFIDFLAKEILNK 242
Query: 220 GLTEEEANLALEYFGGKPPYLIEAIK--HREELEDYCKKALAMRTRQVYSF--------- 268
L ++E L Y GGKP +I+ I E L D L T+++ F
Sbjct: 243 KLPKDEKELIYSYVGGKPVLIIKVIDKLRYENLNDILDFMLKDATQKLKYFLNDLDYIKP 302
Query: 269 ---------AYGKRRIIKLLTEFKNKEEVPFTGKVTRTLEEAVKANILFVDPLNGIIKPQ 319
K I+K L FK+ E+ + VK NILF++P+ GI+KPQ
Sbjct: 303 KVEVGDEVIELKKEDIVKALKLFKDSYEISDSEVAKPIYVYLVKKNILFLNPIEGILKPQ 362
Query: 320 GRLELLAIREAL 331
L AI+ L
Sbjct: 363 SFLIWNAIKRLL 374
>sp|Q58042|Y625_METJA HYPOTHETICAL ATP-BINDING PROTEIN MJ0625 >gi|2128413|pir||A64378
hypothetical protein MJ0625 - Methanococcus jannaschii
>gi|1591336|gb|AAB98625.1| (U67510) M. jannaschii
predicted coding region MJ0625 [Methanococcus
jannaschii]
Length = 336
Score = 168 bits (422), Expect = 7e-41
Identities = 108/345 (31%), Positives = 189/345 (54%), Gaps = 25/345 (7%)
Query: 2 FFDREKELSKLLKIIESEPSLITFIYGPINSGKTALIQEFIRKMPD-HYVAFYINLRATP 60
F++REKEL+ L + +P+ I F+YGP +SGK+ +++ I+++ D + V FY NLR
Sbjct: 3 FYNREKELNYLKTYCQLDPNSILFVYGPKSSGKSTVMRRVIKELEDSNIVFFYYNLRKYA 62
Query: 61 ITKYEDFIDILFSIEFENPIKNLKEALSLVISAGKEILGIPIPNDFLKQILSENKPKNAF 120
E+F+ + F + + N L ++ G G+ DF + K + F
Sbjct: 63 TYSKEEFLRVFFEKSEKKYLLN-----KLELNLGVFKFGVEENFDF-----NNLKLNDVF 112
Query: 121 LYITKLLTEVKRRGKRPILILDELQVIGDLRING--PLIYEIFNFFIHLTKEAHLSHVFT 178
I + + V GK+P+LI+DELQ + ++ NG L+ E+FN F+ LTK HL HV
Sbjct: 113 AKINESINAVVEDGKKPVLIIDELQKLKNIYFNGGKSLLNELFNLFVSLTKMEHLCHVIC 172
Query: 179 ITSDSLFMERIYSEAMLQGRADYFLVDDFDEKTALNFLKSQGLTEEEANLALEYFGGKPP 238
+TSD+LF+E IY + L+ + Y+L+D + T N LK +G +EEE N L+Y P
Sbjct: 173 LTSDTLFIEEIYQSSTLENTSKYYLIDWLRKGTIRNILKEEGFSEEEINYCLDYL-SLPY 231
Query: 239 YLIEAIKHRE---ELEDYCKKALAMRTRQVY----SFAYGKRRIIKLLTEFKNKEEVPFT 291
+++ I++++ +E+ ++ + + ++ + + + K+L++FK+K ++ +
Sbjct: 232 EIVDLIENKKLGLSVEETIRQWINIEKDKIKYLIDTTDLDEEELYKVLSKFKDKIKISYE 291
Query: 292 GKVTRT----LEEAVKANILFVDPLNGIIKPQGRLELLAIREALR 332
+V + + +K ILF D +NGIIKP + AIRE L+
Sbjct: 292 KEVKKEEMKYFKFLIKNEILFYDVINGIIKPTSVKKWYAIREILK 336
>gi|10954515 M. jannaschii predicted coding region MJECL26 [Methanococcus
jannaschii] >gi|2496258|sp|Q60285|YZ26_METJA
HYPOTHETICAL ATP-BINDING PROTEIN MJECL26
>gi|2129041|pir||A64513 hypothetical protein MJECL26 -
Methanococcus jannaschii plasmid pURB800
>gi|1522663|gb|AAC37097.1| (L77118) M. jannaschii
predicted coding region MJECL26 [Methanococcus
jannaschii]
Length = 343
Score = 166 bits (416), Expect = 3e-40
Identities = 112/348 (32%), Positives = 189/348 (54%), Gaps = 27/348 (7%)
Query: 2 FFDREKELSKLLKIIESEPSLITFIYGPINSGKTALIQEFIRKMPD-HYVAFYINLRATP 60
F+DREKEL+ L + EP+ I F+YGP +SGK+ +++ I+++ + + V FY NLR
Sbjct: 7 FYDREKELNYLKTYCQLEPNSILFVYGPKSSGKSTVMRRVIKELENSNIVFFYYNLRKYA 66
Query: 61 ITKYEDFIDILFSIEFENPIKNLKEALSLVISAGKEILGIPIPNDFLKQILSENKPKNAF 120
++F+ + F ++ K L L L + K GI DF L++ F
Sbjct: 67 TPTRDEFLRVFFE---KSDKKYLLNKLELNLGVCK--FGIEENFDFNNLCLND-----VF 116
Query: 121 LYITKLLTEVKRRGKRPILILDELQVIGDLRING--PLIYEIFNFFIHLTKEAHLSHVFT 178
I + + V GK+P+LI+DELQ + ++ NG L+ E+FN F+ LTK HL HV
Sbjct: 117 AKINESINAVVEEGKKPVLIIDELQKLKNIYFNGGKSLLNELFNLFVSLTKMEHLCHVIC 176
Query: 179 ITSDSLFMERIYSEAMLQGRADYFLVDDFDEKTALNFLKSQGLTEEEANLALEYFGGKPP 238
+TSD+LF++ IY + L+ ++Y+L+D + T N LK +G +EEE N AL+Y P
Sbjct: 177 LTSDTLFIDEIYRNSTLKNASEYYLIDWLRKGTIRNILKEEGFSEEEINYALDYL--SLP 234
Query: 239 YLIEAIKHREEL----EDYCKKALAMR----TRQVYSFAYGKRRIIKLLTEFKNKEEVPF 290
Y I + + ++L E K+ + + + + + + +L++FK+K ++ +
Sbjct: 235 YEISQLINNKKLGLSVEQTIKQWINVEKDGLKYLIDTTDLDEEGLYNVLSKFKDKIKISY 294
Query: 291 TGKVTRT----LEEAVKANILFVDPLNGIIKPQGRLELLAIREALRML 334
+V + L+ ++ ILF D +NGIIKP +E AI+E + +
Sbjct: 295 DKEVKKEEMKYLKFLIENEILFYDVINGIIKPTSIIEWHAIKEIINAM 342
>sp|Q58412|YA06_METJA HYPOTHETICAL ATP-BINDING PROTEIN MJ1006 >gi|2128628|pir||E64425
hypothetical protein MJ1006 - Methanococcus jannaschii
>gi|1591665|gb|AAB99014.1| (U67543) M. jannaschii
predicted coding region MJ1006 [Methanococcus
jannaschii]
Length = 359
Score = 160 bits (401), Expect = 2e-38
Identities = 115/351 (32%), Positives = 183/351 (51%), Gaps = 33/351 (9%)
Query: 2 FFDREKELSKLLKIIESEPSLITFIYGPINSGKTALIQEFIRKMP--DHYVAFYINLRAT 59
F++REKEL+ L ++ EP+ I F+YGP +SGK+ ++ I ++ D V FY +LR
Sbjct: 20 FYNREKELNYLKNYVQLEPNSILFVYGPKSSGKSTVMLRVIEELSKKDDLVFFYYDLREY 79
Query: 60 PITKYEDFIDILFSIEFENPIKNLKEALSLVISAGKEILGIPIPNDFLKQILSENKPKNA 119
E+F++I F + K L + + K GI DF K +
Sbjct: 80 ATPTKEEFLEIFFE---KGDKKYLLNRFEINLKIFK--FGIEEKFDF-----DNIKLNDV 129
Query: 120 FLYITKLLTEVKRRGKRPILILDELQVIGDLRINGP------LIYEIFNFFIHLTKEAHL 173
F + + + V + GK+PILI+DELQ + + NG L+ E+FN F+HLTK HL
Sbjct: 130 FSKMKESINAVIKDGKKPILIIDELQKLKSIYFNGEGKGDKSLLNELFNLFVHLTKVRHL 189
Query: 174 SHVFTITSDSLFMERIYSEAMLQGRADYFLVDDFDEKTALNFLKSQGLTEEEANLALEYF 233
HV +TSD+LF+E IY + L+ ++Y+L+D +++ N LK +G +EEE + L+Y
Sbjct: 190 CHVICLTSDTLFIEEIYRNSTLENTSEYYLIDWLRKESIRNILKEEGFSEEEVDYCLKYL 249
Query: 234 GGKPPYLIEAIKHREEL----EDYCKKALAM-RTRQVYSFAYGKR----RIIKLLTEFKN 284
PY I + + ++L E K+ + + R + +Y + K ++I L F+N
Sbjct: 250 --SLPYEISQLINNKKLGLSVEQTIKQWINIERDKILYLISTQKEFEMGKLIDALKLFEN 307
Query: 285 KEEVPFTGKVTRTLEEAV----KANILFVDPLNGIIKPQGRLELLAIREAL 331
K +V + L + V K ILF D +NGIIKP + AI+E +
Sbjct: 308 KIKVDIKEIIRDNLMDEVKFLIKNEILFYDVMNGIIKPTSVKKWYAIKEVI 358
>gi|10954505 M. jannaschii predicted coding region MJECL14 [Methanococcus
jannaschii] >gi|2496256|sp|Q60276|YZ14_METJA
HYPOTHETICAL PROTEIN MJECL14 >gi|2129031|pir||F64511
hypothetical protein MJECL14 - Methanococcus jannaschii
plasmid pURB800 >gi|1522654|gb|AAC37087.1| (L77118) M.
jannaschii predicted coding region MJECL14
[Methanococcus jannaschii]
Length = 314
Score = 157 bits (394), Expect = 1e-37
Identities = 100/310 (32%), Positives = 163/310 (52%), Gaps = 29/310 (9%)
Query: 50 VAFYINLRATPITKYEDFIDILFSIEFENPIKNLKEALSLVISAGKEIL----GIPIPND 105
++F + + T ++F++ LF I+ + K +K + +I+ GI IP
Sbjct: 2 LSFMLISESMIFTSMDNFVEALFEIDENSKEKKIKSYIESFTKGVNDIINLYYGIKIPEP 61
Query: 106 FLKQILSENKPKN-AFLYITKLLTEVKRRGKRPILILDELQVIGDLRING--PLIYEIFN 162
L + E + F +I L + ++G +P+ ILDELQ+I D+ +NG PL+ +F
Sbjct: 62 ILDKFFGEKEKGGLVFKFIRDLFMSLNKKGVQPVFILDELQMIKDIVMNGGKPLLKSLFQ 121
Query: 163 FFIHLTKEAHLSHVFTITSDSLFMERIYSEAMLQGRADYFLVDDFDEKTALNFLK----- 217
F + LTKE H++HVF ++SDSLF+E +Y+ L+GRA Y LVDDFD++T+L F+
Sbjct: 122 FLVSLTKERHIAHVFCLSSDSLFIEYVYNAGELEGRAKYLLVDDFDKETSLKFMDFLAVE 181
Query: 218 -SQGLTEEEANLALEYFGGKP---PYLIEAIKH-----------REELEDYCKKALAMRT 262
+ LT E+ L Y GGK Y+IE K ++E+ K + ++T
Sbjct: 182 GNINLTNEDKELIYSYVGGKAKDIKYVIEESKFKDLREVLDFMLKDEVSKLRKLLVKIKT 241
Query: 263 RQVYSFAYGKRRIIKLLTEFKNKEEVPFTGKVTRTLEEAVKANILFVDPLNGIIKPQGRL 322
+++ Y ++K L FK+ E+ T E +K NILF++P+ I+KPQ L
Sbjct: 242 KKIAEVEY--ENVVKALKLFKDNYEINEYLMDENTKEFLIKRNILFLNPVEEILKPQSYL 299
Query: 323 ELLAIREALR 332
AI+ L+
Sbjct: 300 VWNAIKRVLQ 309
>sp|Q58476|YA76_METJA HYPOTHETICAL ATP-BINDING PROTEIN MJ1076 >gi|2128655|pir||C64434
hypothetical protein MJ1076 - Methanococcus jannaschii
>gi|1591724|gb|AAB99081.1| (U67550) M. jannaschii
predicted coding region MJ1076 [Methanococcus
jannaschii]
Length = 337
Score = 152 bits (381), Expect = 4e-36
Identities = 102/345 (29%), Positives = 181/345 (51%), Gaps = 27/345 (7%)
Query: 2 FFDREKELSKLLKIIESEPSLITFIYGPINSGKTALIQEFIRKMPD-HYVAFYINLRATP 60
F++REKEL+ L ++ EP+ I F+YGP +SGK+ ++ I+++ + + V FY NLR
Sbjct: 3 FYNREKELNYLKNYVQLEPNSILFVYGPKSSGKSTVMMRVIKELENSNIVFFYYNLRKYA 62
Query: 61 ITKYEDFIDILFSIEFENPIKNLKEALSLVISAGKEILGIPIPNDFLKQILSENKPKNAF 120
++F+ I F K+ K+ L + +I I +F + K + F
Sbjct: 63 TPTKDEFLSIFFE-------KSDKKYLLNKLEINLKIFKFGIEENF---DFNNIKLNDVF 112
Query: 121 LYITKLLTEVKRRGKRPILILDELQVIGDLRING--PLIYEIFNFFIHLTKEAHLSHVFT 178
I + + V + GKRP+L++DELQ + ++ N L+ E+FN F+ LTK HL HV
Sbjct: 113 AKINESINTVIKDGKRPVLVIDELQKLKNIYFNSGKSLLNELFNLFVSLTKMEHLCHVIC 172
Query: 179 ITSDSLFMERIYSEAMLQGRADYFLVDDFDEKTALNFLKSQGLTEEEANLALEYFGGKPP 238
+TSD+LF++ +Y + L ++Y+L+D + LK +G ++E + L Y P
Sbjct: 173 LTSDTLFIDNVYRNSSLSEASEYYLIDWLKKDDIKKILKEEGFNKKEIDYCLNYL--SLP 230
Query: 239 YLIEAIKHREEL----EDYCKKALAMRTRQVY----SFAYGKRRIIKLLTEFKNKEEVPF 290
Y I + + ++L E+ K+ + + + + + I K+L++FK+K ++ +
Sbjct: 231 YEISQLINNKKLGLSVEETIKRWINIEADGIKYLIDTSDLNEEEIYKVLSKFKDKIKINY 290
Query: 291 TGKVTRT----LEEAVKANILFVDPLNGIIKPQGRLELLAIREAL 331
V + ++ ++ ILF D +NGIIKP + AI+E L
Sbjct: 291 KKDVKKEEMKYIKFLIENEILFYDVINGIIKPTSVKKWYAIKEIL 335
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.323 0.142 0.397
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 117874323
Number of Sequences: 2977
Number of extensions: 4889073
Number of successful extensions: 13455
Number of sequences better than 1.0e-10: 20
Number of HSP's better than 0.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 13356
Number of HSP's gapped (non-prelim): 22
length of query: 335
length of database: 189,106,746
effective HSP length: 56
effective length of query: 279
effective length of database: 155,591,474
effective search space: 43410021246
effective search space used: 43410021246
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.9 bits)
S2: 165 (68.7 bits)