BLASTP 2.0.10 [Aug-26-1999]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= PAB2010 (PAB2010) DE:Hypothetical protein
         (379 letters)

Database: ./suso.pep; /banques/blast2/nr.pep
           598,487 sequences; 189,106,746 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

pir||G75170 hypothetical protein PAB2010 - Pyrococcus abyssi (st...   729  0.0
pir||E71221 hypothetical protein PH0032 - Pyrococcus horikoshii ...   265  5e-70
pir||C82449 conserved hypothetical protein VCA0526 [imported] - ...   146  5e-34
sp|P37019|YADQ_ECOLI HYPOTHETICAL 46.0 KD PROTEIN IN HEML-PFS IN...   145  1e-33
pir||C64739 yadQ protein - Escherichia coli >gi|1552733|gb|AAB08...   145  1e-33
pir||S76449 hypothetical protein - Synechocystis sp. (strain PCC...   116  4e-25
pir||S74833 hypothetical protein sll0855 - Synechocystis sp. (st...   109  7e-23
sp|Q57753|Y305_METJA HYPOTHETICAL PROTEIN MJ0305 >gi|2128226|pir...   106  6e-22
dbj|BAA15316.1| (D90801) ORF_ID:o311#6; similar to [SwissProt Ac...   102  7e-21
pir||B64915 probable membrane protein b1592 - Escherichia coli >...   102  7e-21
gb|AAG19829.1| (AE005067) chloride channel; Clc [Halobacterium s...    98  2e-19
gb|AAF79509.1|AC002328_17 (AC002328) F20N2.5 [Arabidopsis thaliana]    90  4e-17
gi|11499010 chloride channel, putative [Archaeoglobus fulgidus] ...    90  5e-17
gb|AAK43299.1| Conserved hypothetical protein [Sulfolobus solfat...    84  2e-15
gb|AAF49542.1| (AE003528) CG5284 gene product [Drosophila melano...    84  2e-15
pir||T39817 hypothetical protein SPBC19C7.11 - fission yeast  (S...    84  3e-15
emb|CAC12582.1| (AL445067) chloride channel (CLC-3) related prot...    74  3e-12
gb|AAD53928.1|AF179611_12 (AF179611) chloride channel protein [Z...    70  4e-11

>pir||G75170 hypothetical protein PAB2010 - Pyrococcus abyssi (strain Orsay)
           >gi|5457956|emb|CAB49446.1| (AJ248284) hypothetical
           protein [Pyrococcus abyssi]
           Length = 379
           
 Score =  729 bits (1862), Expect = 0.0
 Identities = 379/379 (100%), Positives = 379/379 (100%)

Query: 1   MKAYTLVKIGVLAGVIVGAYKLLVKVIESYYLSLARNAQERPVLLVIWIVLTLFSYYIIS 60
           MKAYTLVKIGVLAGVIVGAYKLLVKVIESYYLSLARNAQERPVLLVIWIVLTLFSYYIIS
Sbjct: 1   MKAYTLVKIGVLAGVIVGAYKLLVKVIESYYLSLARNAQERPVLLVIWIVLTLFSYYIIS 60

Query: 61  RLLNREPNIARGGILQIKEVISGTRDYNPVRVIVGKIIGHLLALISGLSLGKAGPSIQLG 120
           RLLNREPNIARGGILQIKEVISGTRDYNPVRVIVGKIIGHLLALISGLSLGKAGPSIQLG
Sbjct: 61  RLLNREPNIARGGILQIKEVISGTRDYNPVRVIVGKIIGHLLALISGLSLGKAGPSIQLG 120

Query: 121 GSIAMIFSKKKVLIGAGAAAGLSAAFEAPIAGIVSTFEILRIEVTPPAILYLAIPSLISA 180
           GSIAMIFSKKKVLIGAGAAAGLSAAFEAPIAGIVSTFEILRIEVTPPAILYLAIPSLISA
Sbjct: 121 GSIAMIFSKKKVLIGAGAAAGLSAAFEAPIAGIVSTFEILRIEVTPPAILYLAIPSLISA 180

Query: 181 LISHYLFPVRPTLVYTPSEAKDYQYLILLGVTTGAYSSLFIWLIKHIRKIKLIIPFFESW 240
           LISHYLFPVRPTLVYTPSEAKDYQYLILLGVTTGAYSSLFIWLIKHIRKIKLIIPFFESW
Sbjct: 181 LISHYLFPVRPTLVYTPSEAKDYQYLILLGVTTGAYSSLFIWLIKHIRKIKLIIPFFESW 240

Query: 241 ILLPIMPLALGGGHALIFSLFTGNFGITFLLLLLLLKSIHTILSYTSGAPGGLFLPSLAI 300
           ILLPIMPLALGGGHALIFSLFTGNFGITFLLLLLLLKSIHTILSYTSGAPGGLFLPSLAI
Sbjct: 241 ILLPIMPLALGGGHALIFSLFTGNFGITFLLLLLLLKSIHTILSYTSGAPGGLFLPSLAI 300

Query: 301 GAIIGKLFVETFGVSNTFVLAGMVGVLSGTLRAPMTGAILMAEITKSPRGFLDFLVAGLS 360
           GAIIGKLFVETFGVSNTFVLAGMVGVLSGTLRAPMTGAILMAEITKSPRGFLDFLVAGLS
Sbjct: 301 GAIIGKLFVETFGVSNTFVLAGMVGVLSGTLRAPMTGAILMAEITKSPRGFLDFLVAGLS 360

Query: 361 SYATSYALKKVKLQKRTLR 379
           SYATSYALKKVKLQKRTLR
Sbjct: 361 SYATSYALKKVKLQKRTLR 379


>pir||E71221 hypothetical protein PH0032 - Pyrococcus horikoshii
           >gi|3256417|dbj|BAA29100.1| (AP000001) 370aa long
           hypothetical protein [Pyrococcus horikoshii]
           Length = 370
           
 Score =  265 bits (671), Expect = 5e-70
 Identities = 151/366 (41%), Positives = 225/366 (61%), Gaps = 18/366 (4%)

Query: 6   LVKIGVLAGVIVGAYKLLVKVIESYYLSLARNAQERPVLLVIWIVLTLFSYYIISRLLNR 65
           L+ +G+L G+IVGAYK+LV ++   Y +++   +      ++W + T+ + + +  +L +
Sbjct: 4   LILVGILVGLIVGAYKVLVCLVGDLYPAISEGIRRDIRFALLWFLFTVLAIFTVEVMLKK 63

Query: 66  EPNIARGGILQIKEVISGTRDYNPVRVIVGKIIGHLLALISGLSLGKAGPSIQLGGSIAM 125
           EP  + GGI Q+  V+ G   YNPV+VI+ KI G LL ++SG SLG+ GPS+QLGGS+AM
Sbjct: 64  EPAASSGGINQMYLVLHGILRYNPVKVILTKIFGSLLVIMSGFSLGRVGPSVQLGGSLAM 123

Query: 126 IFSKKKVLIGAGAAAGLSAAFEAPIAGIVSTFEILRIEVTPPAILYLAIPSLISALISHY 185
           +  +   LI AG AAG++A  EAPI G+V T E+ +I  T   I+ L   S+ +AL+S  
Sbjct: 124 VLGEG--LIDAGIAAGVAATLEAPITGVVFTLEVFKIRPTLYKIVTLLFASVPAALVSKL 181

Query: 186 LFPVR--PTLVYTPSEAKDYQYLILLGVTTGAYSSLFIWLIKHIRKI------KLIIPFF 237
           +FP+R  P+  Y+     DY  ++LLG+ TG YSS F+ L+  +RK       K +    
Sbjct: 182 MFPMRFWPSFEYSYG-LFDYLLILLLGIFTGLYSSAFMQLLFKLRKFLVKRSYKFVPSLL 240

Query: 238 ESWILLPIMPLALGGGHALIFSLFTGNF-GITFLLLLLLLKSIHTILSYTSGAPGGLFLP 296
            SW  + ++P  LGGG  L++SL   +   +  L+LLL+LKSIHT+ S  S APGGLF P
Sbjct: 241 FSWFFILLLPQVLGGGKLLLWSLMKESIVSLDILILLLILKSIHTLFSAASDAPGGLFCP 300

Query: 297 SLAIGAIIGKLFVETFGVSNTFVLAGMVGVLSGTLRAPMTGAILMAEITKSPRGFLDFLV 356
           SLA+GAIIG +      +   FV+ GMVGVL+G  +AP+T  +LM E   +P+     L+
Sbjct: 301 SLAMGAIIGSI------LGKKFVVPGMVGVLAGVYKAPLTPILLMFETGVTPKVIPGLLL 354

Query: 357 AGLSSY 362
           + L SY
Sbjct: 355 SSLISY 360


>pir||C82449 conserved hypothetical protein VCA0526 [imported] - Vibrio cholerae
           (group O1 strain N16961) >gi|9657932|gb|AAF96429.1|
           (AE004383) conserved hypothetical protein [Vibrio
           cholerae]
           Length = 468
           
 Score =  146 bits (364), Expect = 5e-34
 Identities = 115/400 (28%), Positives = 193/400 (47%), Gaps = 56/400 (14%)

Query: 9   IGVLAGVIVGAYKLLVKVIESYYLSLARNAQERPVLLVIWIVLTLFS-------YYIISR 61
           +G+LAG++   ++  V ++        ++  E    L +W+   L S       Y+++ R
Sbjct: 40  VGILAGLVGTYFEQAVHLVSETRTDWLKS--EIGSFLPLWLAAFLISAFLAFIGYFLVHR 97

Query: 62  LLNREPNIARGGILQIKEVISGTRDYNPVRVIVGKIIGHLLALISGLSLGKAGPSIQLGG 121
                P  A  GI +I+  + G R     RV+  K  G + AL SG+ LG+ GP++Q+GG
Sbjct: 98  FA---PEAAGSGIPEIEGAMDGMRPVRWWRVLPVKFFGGMGALGSGMVLGREGPTVQMGG 154

Query: 122 SIAMIFSK---------KKVLIGAGAAAGLSAAFEAPIAGIVSTFEILRIEVTPPAILYL 172
           ++  + S          +  L+ AGAA GL+AAF AP+AGI+   E +R +     I   
Sbjct: 155 AVGRMISDIFRVKNEDTRHSLLAAGAAGGLAAAFNAPLAGIMFVIEEMRPQFRYTLISVR 214

Query: 173 AIPSLISALISHYLFPV---RPTLVYTPS----EAKDYQYLILLGVTTGAYSSLFIWLIK 225
           A+  +ISA+ ++ +F V   +  ++  P     E       +LLG   G +  LF +LI 
Sbjct: 215 AV--IISAVAANIVFRVINGQDAVITMPQYDAPELSTLGLFLLLGALFGVFGVLFNYLIT 272

Query: 226 HIRKIKLIIPFFES----------------WILLPIMPLALGGGHALIFSLFTGNFGITF 269
             +   L + F  +                 +LL  +P   GGG +LI ++  G +G   
Sbjct: 273 LAQD--LFVKFHRNDRKRYLLTGSMIGGCFGLLLLYVPELTGGGISLIPTITNGGYGAGI 330

Query: 270 LLLLLLLKSIHTILSYTSGAPGGLFLPSLAIGAIIG-------KLFVETFGVS-NTFVLA 321
           LLLL + +   T+L + SGAPGG+F P LA+G + G       K++     +    F +A
Sbjct: 331 LLLLFVGRIFTTLLCFGSGAPGGIFAPMLALGTLFGYAFGLIAKMWFPELNIEPGMFAIA 390

Query: 322 GMVGVLSGTLRAPMTGAILMAEITKSPRGFLDFLVAGLSS 361
           GM  + + T+RAP+TG +L+ E+T +    L  ++  L +
Sbjct: 391 GMGALFAATVRAPITGILLVIEMTNNYHLILPLIITSLGA 430


>sp|P37019|YADQ_ECOLI HYPOTHETICAL 46.0 KD PROTEIN IN HEML-PFS INTERGENIC REGION
           >gi|628807|pir||S45224 voltage-gated chloride channel
           protein homolog - Escherichia coli
           >gi|473814|dbj|BAA05603.1| (D26562) 'ORF' [Escherichia
           coli]
           Length = 436
           
 Score =  145 bits (361), Expect = 1e-33
 Identities = 110/394 (27%), Positives = 191/394 (47%), Gaps = 44/394 (11%)

Query: 9   IGVLAGVIVGAYKLLVKVIESYYL-SLARNAQERPVLLVIWI----VLTLFSYYIISRLL 63
           +G L G+   A+   V  +++  + +L   A   P+LL +      VL +F Y+++ +  
Sbjct: 5   VGTLVGLAAVAFDKGVAWLQNQRMGALVHTADNYPLLLTVAFLCSAVLAMFGYFLVRKYA 64

Query: 64  NREPNIARGGILQIKEVISGTRDYNPVRVIVGKIIGHLLALISGLSLGKAGPSIQLGGSI 123
              P     GI +I+  +   R     RV+  K  G L  L  G+ LG+ GP++Q+GG+I
Sbjct: 65  ---PEAGGSGIPEIEGALEDQRPVRWWRVLPVKFFGGLGTLGGGMVLGREGPTVQIGGNI 121

Query: 124 AMIF---------SKKKVLIGAGAAAGLSAAFEAPIAGIVSTFEILRIEVTPPAILYLAI 174
             +            +  L+  GAAAGL+AAF AP+AGI+   E +R +     I   A+
Sbjct: 122 GRMVLDIFRLKGDEARHTLLATGAAAGLAAAFNAPLAGILFIIEEMRPQFRYTLISIKAV 181

Query: 175 -PSLISALISHYLFPVRPTLV----YTPSEAKDYQYLILLGVTTGAYSSLFIWLIKHIRK 229
              +I + I + +F     L+     + +        ++LG+  G +  +F   +  ++ 
Sbjct: 182 FIGVIMSTIMYRIFNHEVALIDVGKLSDAPLNTLWLYLILGIIFGIFGPIFNKWVLGMQD 241

Query: 230 I--KLIIPFFESWILLP------------IMPLALGGGHALIFSLFTGNFGITFLLLLLL 275
           +  ++       W+L+             + P   GGG  LI     GNF +  L+ + +
Sbjct: 242 LLHRVHGGNITKWVLMGGAIGGLCGLLGFVAPATSGGGFNLIPIATAGNFSMGMLVFIFV 301

Query: 276 LKSIHTILSYTSGAPGGLFLPSLAIGAIIGKLF----VETFG----VSNTFVLAGMVGVL 327
            + I T+L ++SGAPGG+F P LA+G ++G  F    VE F      + TF +AGM  +L
Sbjct: 302 ARVITTLLCFSSGAPGGIFAPMLALGTVLGTAFGMVAVELFPQYHLEAGTFAIAGMGALL 361

Query: 328 SGTLRAPMTGAILMAEITKSPRGFLDFLVAGLSS 361
           + ++RAP+TG IL+ E+T + +  L  ++ GL +
Sbjct: 362 AASIRAPLTGIILVLEMTDNYQLILPMIITGLGA 395


>pir||C64739 yadQ protein - Escherichia coli >gi|1552733|gb|AAB08585.1| (U70214)
           similar to voltage-gated chloride channel protein
           [Escherichia coli] >gi|1786350|gb|AAC73266.1| (AE000125)
           putative channel transporter [Escherichia coli K12]
           Length = 473
           
 Score =  145 bits (361), Expect = 1e-33
 Identities = 110/394 (27%), Positives = 191/394 (47%), Gaps = 44/394 (11%)

Query: 9   IGVLAGVIVGAYKLLVKVIESYYL-SLARNAQERPVLLVIWI----VLTLFSYYIISRLL 63
           +G L G+   A+   V  +++  + +L   A   P+LL +      VL +F Y+++ +  
Sbjct: 42  VGTLVGLAAVAFDKGVAWLQNQRMGALVHTADNYPLLLTVAFLCSAVLAMFGYFLVRKYA 101

Query: 64  NREPNIARGGILQIKEVISGTRDYNPVRVIVGKIIGHLLALISGLSLGKAGPSIQLGGSI 123
              P     GI +I+  +   R     RV+  K  G L  L  G+ LG+ GP++Q+GG+I
Sbjct: 102 ---PEAGGSGIPEIEGALEDQRPVRWWRVLPVKFFGGLGTLGGGMVLGREGPTVQIGGNI 158

Query: 124 AMIF---------SKKKVLIGAGAAAGLSAAFEAPIAGIVSTFEILRIEVTPPAILYLAI 174
             +            +  L+  GAAAGL+AAF AP+AGI+   E +R +     I   A+
Sbjct: 159 GRMVLDIFRLKGDEARHTLLATGAAAGLAAAFNAPLAGILFIIEEMRPQFRYTLISIKAV 218

Query: 175 -PSLISALISHYLFPVRPTLV----YTPSEAKDYQYLILLGVTTGAYSSLFIWLIKHIRK 229
              +I + I + +F     L+     + +        ++LG+  G +  +F   +  ++ 
Sbjct: 219 FIGVIMSTIMYRIFNHEVALIDVGKLSDAPLNTLWLYLILGIIFGIFGPIFNKWVLGMQD 278

Query: 230 I--KLIIPFFESWILLP------------IMPLALGGGHALIFSLFTGNFGITFLLLLLL 275
           +  ++       W+L+             + P   GGG  LI     GNF +  L+ + +
Sbjct: 279 LLHRVHGGNITKWVLMGGAIGGLCGLLGFVAPATSGGGFNLIPIATAGNFSMGMLVFIFV 338

Query: 276 LKSIHTILSYTSGAPGGLFLPSLAIGAIIGKLF----VETFG----VSNTFVLAGMVGVL 327
            + I T+L ++SGAPGG+F P LA+G ++G  F    VE F      + TF +AGM  +L
Sbjct: 339 ARVITTLLCFSSGAPGGIFAPMLALGTVLGTAFGMVAVELFPQYHLEAGTFAIAGMGALL 398

Query: 328 SGTLRAPMTGAILMAEITKSPRGFLDFLVAGLSS 361
           + ++RAP+TG IL+ E+T + +  L  ++ GL +
Sbjct: 399 AASIRAPLTGIILVLEMTDNYQLILPMIITGLGA 432


>pir||S76449 hypothetical protein - Synechocystis sp. (strain PCC 6803)
           >gi|1653666|dbj|BAA18578.1| (D90915) chloride channel
           protein [Synechocystis sp.]
           Length = 899
           
 Score =  116 bits (288), Expect = 4e-25
 Identities = 100/334 (29%), Positives = 160/334 (46%), Gaps = 43/334 (12%)

Query: 72  GGILQIKEVISGTRDYNPVRVIVGKIIGHLLALISGLSLGKAGPSIQLGGSIAMIFSK-- 129
           GGI Q+K  ++        RV V K++G +L L  G++LG+  P++ +G ++A   S+  
Sbjct: 96  GGIPQVKAALARYPIPLDWRVAVVKLLGTVLVLGGGMTLGRRAPTVHIGAALAAQLSRWF 155

Query: 130 ------KKVLIGAGAAAGLSAAFEAPIAGIVSTFEILRIEVTPPAILYLAIPSLISALIS 183
                 ++ +I AGAAAGL+A F  PIAG++   E L  +V+   +    + S + A+ S
Sbjct: 156 PTSPEHRRQMIAAGAAAGLAAGFTTPIAGVLFVVEELMRDVSSLTLETAIVASFVGAVTS 215

Query: 184 ----------HYLFPVRPTLVYTPSEAKDYQYL-ILLGVTTGAYSSLFIWLIKHIRKIKL 232
                      +     PT+ +T  E   Y  L IL G+     +   + L    RK  L
Sbjct: 216 LVFQSSDLNLAHSLSNSPTVRFTTGEIPFYLLLGILAGILGVLLNRSILSLQNWQRKQNL 275

Query: 233 IIPFFESWILLPIMPLALGGGHALIFSLFTGNFGITF-----------LLLLLLLKSIHT 281
            +      I + ++ L  G   AL+ S F  N G+             ++L L+   I T
Sbjct: 276 SLV-----IRIGVVGLISGVAIALLPSFFRDNAGLREFVTSGELSWHQVVLTLVAHFILT 330

Query: 282 ILSYTSGAPGGLFLPSLAIGAIIGKLFVETFG-------VSNTFVLAGMVGVLSGTLRAP 334
           IL+Y++ APGGLF P+L +G+ +G L V  FG          TF LAGM    +  +R P
Sbjct: 331 ILAYSTDAPGGLFAPALVMGSALGYL-VGEFGSYWQDQVTQTTFALAGMGAFFTSVVRVP 389

Query: 335 MTGAILMAEITKSPRGFLDFLVAGLSSYATSYAL 368
           +T  I++ E+T +    L  +VA  +SY  + +L
Sbjct: 390 VTAIIIVFELTGNFNVVLPLMVACATSYLVAESL 423


>pir||S74833 hypothetical protein sll0855 - Synechocystis sp. (strain PCC 6803)
           >gi|1652876|dbj|BAA17794.1| (D90909) hypothetical
           protein [Synechocystis sp.]
           Length = 451
           
 Score =  109 bits (269), Expect = 7e-23
 Identities = 106/399 (26%), Positives = 180/399 (44%), Gaps = 40/399 (10%)

Query: 7   VKIGVLAGVIVGAYKLLVKVIESYYLSLARNAQERPVLLVIWIVLTLFSYYIISR---LL 63
           + +G++ GV+   +K  V  +  +   LA+     P L   W+V  L S  +++    L+
Sbjct: 36  IVVGLITGVLGAGFKSAVNNMLQWRSQLAQILAPIPPLA--WLVTALISGGMVALSFWLM 93

Query: 64  NR-EPNIARGGILQIKEVISGTRDYNPVRVIVGKIIGHLLALISGLSLGKAGPSIQLGGS 122
            R  P+ +  GI QI+  + G       RV+  K++G  L+L +G+  G  GP+IQ+GGS
Sbjct: 94  KRFAPDTSGSGIPQIEGHLEGKLPLVWQRVLPIKLVGGFLSLGAGMLAGFEGPTIQMGGS 153

Query: 123 IAMIF--------SKKKVLIGAGAAAGLSAAFEAPIAGIVSTFEILRIEVTPPAILY--L 172
           I  +           +++LI  GA AGL+ AF AP+AG+    E +        + Y  L
Sbjct: 154 IGQMTGGWFKATQENQRILIAVGAGAGLATAFNAPLAGVALIGEEMHPRFRSQTLAYHSL 213

Query: 173 AIPSLISALISHYLFPVRPTLVYTPSEAKDYQYL---ILLGVTTGAYSSLF-IWLIKHIR 228
               +++ +I   +      +  T  +      L   I+LG+  G     F   L K + 
Sbjct: 214 LFGCVMATIILRMIRGQSAIISLTEFKRVPLDSLWMFIILGILFGVMGYTFNRGLFKVLD 273

Query: 229 KIKLIIPFFESWI---------LLPIMPLAL--GGGHALIFSLFTGNFGITFLLLLLLLK 277
               + P    W          +L + PL L  GG +A++++ F      + L+L+   +
Sbjct: 274 WFDRLPPLATKWKGFLLGSIIGILSLFPLPLTDGGDNAVLWA-FNSQSHFSTLILVFCGR 332

Query: 278 SIHTILSYTSGAPGGLFLPSLAIGAIIG--------KLFVETFGVSNTFVLAGMVGVLSG 329
            + T++ Y SGA GG+F P L I +I+          LF           +AGM  +++ 
Sbjct: 333 FLLTLICYGSGAIGGIFAPMLGIASIVSVAMARHFHLLFPSQIPEPAVMAIAGMGALVAA 392

Query: 330 TLRAPMTGAILMAEITKSPRGFLDFLVAGLSSYATSYAL 368
           T+RAP+T  +L  E+T +    L  LV  L +   + AL
Sbjct: 393 TVRAPLTAILLTIEMTDNYFVILPLLVTCLVASVVAEAL 431


>sp|Q57753|Y305_METJA HYPOTHETICAL PROTEIN MJ0305 >gi|2128226|pir||B64338 hypothetical
           protein MJ0305 - Methanococcus jannaschii
           >gi|1499089|gb|AAB98292.1| (U67485) conserved
           hypothetical protein [Methanococcus jannaschii]
           Length = 395
           
 Score =  106 bits (261), Expect = 6e-22
 Identities = 107/397 (26%), Positives = 173/397 (42%), Gaps = 47/397 (11%)

Query: 1   MKAYTLVKIGVLAGVIVGAYKLLVKVIESYYLSLARNAQERPVLLV--IWIVLTLFSYYI 58
           +K    + I  L G++ G   +++ +I  Y+       ++  VLL+  ++ +  LF  YI
Sbjct: 13  IKIIKWIGIASLIGIVGGLSSVIIAIIIEYF------PEKHNVLLIPIVFFIAGLFVDYI 66

Query: 59  ISRLLNREPNIARGGILQIKEVISGTRDYNPVRVIVGKIIGHLLALISGLSLGKAGPSIQ 118
                     +   GI ++ + ++       +R ++  ++   +  + G S GK GP +Q
Sbjct: 67  YE--------LKGSGIDRVLKALNTNEKLTWIRGLLKVLLAGAVIAVGG-SAGKEGPCVQ 117

Query: 119 LGGSIA------MIFSKKKVLIGAGAAAGLSAAFEAPIAGIVSTFEILR------IEVTP 166
              S A      +    ++++I  G A GL  AF AP+   +   EI+       I + P
Sbjct: 118 SSASFADELYRLLKLKNRELVIITGIAGGLGGAFSAPLGTAILACEIIEHENFNYINLIP 177

Query: 167 PAILYLAIPSLISALISHYLFPVRPTLVYTPSEAKDYQYLILLGVTTGAYSSLFIWLIKH 226
           P I+   +  LI  LI+        TL YT +   D+   IL        +  +I   + 
Sbjct: 178 P-IIASVVGYLIFYLITGRKHLFNITLSYTIN-IHDFLLFILGAFFCSLIAHCYIKTYRK 235

Query: 227 IR------KIKLIIPFFESWILLPIM----PLALGGGHALIFSLFTGNFGITFLLLLLLL 276
           I       KI   I      IL+ ++    P  +G G  L   LF   F + FL+LLL+ 
Sbjct: 236 ISSTFDNLKIPYCIKTLIGGILVAVISYFIPEVMGMGLTLTKELFIMEFSLVFLVLLLIG 295

Query: 277 KSIHTILSYTSGAPGGLFLPSLAIGAIIGKLFVETFG-VSNTFVLAGMVGVLSGTLRAPM 335
           K + T  +  SG PGGL  PS+ IGAI G +F    G  S  +++ G+   LS T  AP+
Sbjct: 296 KILATSFTVGSGTPGGLVFPSMCIGAISGIIFGSLIGDCSAPYIVLGIATTLSATTNAPL 355

Query: 336 TGAILMAEITKSPRGFLDFLVAGLSSYATSYALKKVK 372
            GA+L  EI     GF DF V         Y + K++
Sbjct: 356 GGAVLCTEIF----GF-DFAVPASIGAVIGYQMTKLE 387


>dbj|BAA15316.1| (D90801) ORF_ID:o311#6; similar to [SwissProt Accession Number
           P37019] [Escherichia coli] >gi|1742626|dbj|BAA15326.1|
           (D90802) ORF_ID:o311#6; similar to [SwissProt Accession
           Number P37019] [Escherichia coli]
           Length = 430
           
 Score =  102 bits (252), Expect = 7e-21
 Identities = 95/410 (23%), Positives = 171/410 (41%), Gaps = 53/410 (12%)

Query: 20  YKLLVKVIESYYLSLARNAQERPVLLVIWIVLTLFSYYIISRLLNREP----------NI 69
           ++LL+  +     + A       +LL+ W+ L   S  +++   N  P           +
Sbjct: 15  HRLLIATVVGILAAFAVAGFRHAMLLLEWLFLNNDSGSLVNAATNLSPWRRLLTPALGGL 74

Query: 70  ARGGILQIKEVISGTRDYNPVRVIVG--------------KIIGHLLALISGLSLGKAGP 115
           A G +L   +  +  R + P   +                K +  LL + SG ++G+ G 
Sbjct: 75  AAGLLLMGWQKFTQQRPHAPTDYMEALQTDGQFDYAASLVKSLASLLVVTSGSAIGREGA 134

Query: 116 SIQLGGSIAMIFSKK-------KVLIGAGAAAGLSAAFEAPIAGIVSTFEIL----RIEV 164
            I L    A  F+++       K+ I  GAAAG++AA+ AP+AG +   E+L     +  
Sbjct: 135 MILLAALAASCFAQRFTPRQEWKLWIACGAAAGMAAAYRAPLAGSLFIAEVLFGTMMLAS 194

Query: 165 TPPAILYLAIPSLISALISHYLFPVRPTLVYTPSEAKDYQYLILLGVTTGAYSSLFIWLI 224
             P I+   +  L+S LI+H    +    +    +A+DY  +I  GV  G    L + L+
Sbjct: 195 LGPVIISAVVALLVSNLINHSDALLYNVQLSVTVQARDYALIISTGVLAGLCGPLLLTLM 254

Query: 225 KHIRKIKLIIPFFESW----------ILLPIMPLALGGGHALIFSLFTGNFGITFLLLLL 274
               +  + +     W          +L    P   G G++ + S  T    +  +  + 
Sbjct: 255 NACHRGFVSLKLAPPWQLALGGLIVGLLSLFTPAVWGNGYSTVQSFLTAPPLLMIIAGIF 314

Query: 275 LLKSIHTILSYTSGAPGGLFLPSLAIGAIIGKLFVETFG--------VSNTFVLAGMVGV 326
           L K    + S  SGAPGG+F P+L IG  IG L+  + G        ++    L GM  +
Sbjct: 315 LCKLCAVLASSGSGAPGGVFTPTLFIGLAIGMLYGRSLGLWFPDGEEITLLLGLTGMATL 374

Query: 327 LSGTLRAPMTGAILMAEITKSPRGFLDFLVAGLSSYATSYALKKVKLQKR 376
           L+ T  AP+   +++ E+T   +     L+A + +   S  L +  + ++
Sbjct: 375 LAATTHAPIMSTLMICEMTGEYQLLPGLLIACVIASVISRTLHRDSIYRQ 424


>pir||B64915 probable membrane protein b1592 - Escherichia coli
           >gi|1787876|gb|AAC74664.1| (AE000255) putative chloride
           channel [Escherichia coli K12]
           Length = 438
           
 Score =  102 bits (252), Expect = 7e-21
 Identities = 95/410 (23%), Positives = 171/410 (41%), Gaps = 53/410 (12%)

Query: 20  YKLLVKVIESYYLSLARNAQERPVLLVIWIVLTLFSYYIISRLLNREP----------NI 69
           ++LL+  +     + A       +LL+ W+ L   S  +++   N  P           +
Sbjct: 23  HRLLIATVVGILAAFAVAGFRHAMLLLEWLFLNNDSGSLVNAATNLSPWRRLLTPALGGL 82

Query: 70  ARGGILQIKEVISGTRDYNPVRVIVG--------------KIIGHLLALISGLSLGKAGP 115
           A G +L   +  +  R + P   +                K +  LL + SG ++G+ G 
Sbjct: 83  AAGLLLMGWQKFTQQRPHAPTDYMEALQTDGQFDYAASLVKSLASLLVVTSGSAIGREGA 142

Query: 116 SIQLGGSIAMIFSKK-------KVLIGAGAAAGLSAAFEAPIAGIVSTFEIL----RIEV 164
            I L    A  F+++       K+ I  GAAAG++AA+ AP+AG +   E+L     +  
Sbjct: 143 MILLAALAASCFAQRFTPRQEWKLWIACGAAAGMAAAYRAPLAGSLFIAEVLFGTMMLAS 202

Query: 165 TPPAILYLAIPSLISALISHYLFPVRPTLVYTPSEAKDYQYLILLGVTTGAYSSLFIWLI 224
             P I+   +  L+S LI+H    +    +    +A+DY  +I  GV  G    L + L+
Sbjct: 203 LGPVIISAVVALLVSNLINHSDALLYNVQLSVTVQARDYALIISTGVLAGLCGPLLLTLM 262

Query: 225 KHIRKIKLIIPFFESW----------ILLPIMPLALGGGHALIFSLFTGNFGITFLLLLL 274
               +  + +     W          +L    P   G G++ + S  T    +  +  + 
Sbjct: 263 NACHRGFVSLKLAPPWQLALGGLIVGLLSLFTPAVWGNGYSTVQSFLTAPPLLMIIAGIF 322

Query: 275 LLKSIHTILSYTSGAPGGLFLPSLAIGAIIGKLFVETFG--------VSNTFVLAGMVGV 326
           L K    + S  SGAPGG+F P+L IG  IG L+  + G        ++    L GM  +
Sbjct: 323 LCKLCAVLASSGSGAPGGVFTPTLFIGLAIGMLYGRSLGLWFPDGEEITLLLGLTGMATL 382

Query: 327 LSGTLRAPMTGAILMAEITKSPRGFLDFLVAGLSSYATSYALKKVKLQKR 376
           L+ T  AP+   +++ E+T   +     L+A + +   S  L +  + ++
Sbjct: 383 LAATTHAPIMSTLMICEMTGEYQLLPGLLIACVIASVISRTLHRDSIYRQ 432


>gb|AAG19829.1| (AE005067) chloride channel; Clc [Halobacterium sp. NRC-1]
           Length = 792
           
 Score = 97.9 bits (240), Expect = 2e-19
 Identities = 79/335 (23%), Positives = 145/335 (42%), Gaps = 47/335 (14%)

Query: 58  IISRLLNREPNIARG-GILQIKEVISGTRDYNPVRVIVGKIIGHLLALISGLSLGKAGPS 116
           I+  ++ R     RG G+ ++ E +         ++ V K +   +A+ SG SLG+ GP 
Sbjct: 251 IVGLVIRRTTTAIRGHGVPEVLESLMVHNGQIDPKIAVYKTVSSSIAIASGASLGREGPI 310

Query: 117 IQLGGSIAMIFSK------KKVLIGAGAAAGLSAAFEAPIAGIVSTFEILRIEVTPPAIL 170
           +Q+G +    F         + L+ AGA +G++A F  P+AG++   EIL  E     ++
Sbjct: 311 VQIGSAAGSYFGAFVHSRYTRTLVAAGAGSGIAATFNTPLAGVMFALEILLSEYALTNVV 370

Query: 171 YLAIPSLISALISH-------------YLFPVRPTLVYTPSEAKDYQYLILLGVTTGAYS 217
            + + ++ +  ++              +L P+   +V    E   Y  L ++    GA  
Sbjct: 371 TVVLSAVTATAVARSVLAFTAVPGVREFLVPITYHIVTPSLEFPLYAGLGVVAAGIGAAV 430

Query: 218 SLFIWLIKHIRKIKLIIPFFES---------------WILLPIMPLA-----LGGGHALI 257
              ++  +H+ + +  +P + +                +LL   PL       G G+  I
Sbjct: 431 VRLLYASEHLFQDRWDLPGYLTPAIGGALLGVSVLLTAVLLDASPLQSATWLFGVGYGTI 490

Query: 258 FSLFTGNFGITFLLLLLLLKSIHTILSYTSGAPGGLFLPSLAIGAIIGKLFVETFGV--- 314
            S   G+  +  L+ L +LK +   LS  SG  GG+F P+L +GA+ G  F         
Sbjct: 491 HSSIAGDLTLLVLVALAVLKVVGFSLSIGSGNSGGVFSPTLYVGAMAGGAFGVLVNAAFA 550

Query: 315 ----SNTFVLAGMVGVLSGTLRAPMTGAILMAEIT 345
               +  + L G  GV + T  AP+T  +++ E+T
Sbjct: 551 GTASAGAYALVGTAGVFAATASAPLTATLIIFELT 585


>gb|AAF79509.1|AC002328_17 (AC002328) F20N2.5 [Arabidopsis thaliana]
           Length = 784
           
 Score = 90.1 bits (220), Expect = 4e-17
 Identities = 98/327 (29%), Positives = 140/327 (41%), Gaps = 60/327 (18%)

Query: 96  KIIGHLLALISGLSLGKAGPSIQLGGSIAMIFS--------KKKVLIGAGAAAGLSAAFE 147
           K I   + L +G SLG  GPS+ +G S A  F+        ++  L  AGAA+G+++ F 
Sbjct: 230 KAIQAAVTLGTGCSLGPEGPSVDIGKSCANGFALMMENNRERRIALTAAGAASGIASGFN 289

Query: 148 APIAGIVSTFEI----LRIEVTPP---AILYLAIPSLISALISHYLFPVRPTLV---YTP 197
           A +AG     E     LR E +PP   A++ LA  S+IS+ +S+ L   +       Y  
Sbjct: 290 AAVAGCFFAIETVLRPLRAENSPPFTTAMIILA--SVISSTVSNALLGTQSAFTVPSYDL 347

Query: 198 SEAKDYQYLILLGVTTGAYSSLFIWLIKHIRKIKLIIPFFESWILLP-IMPLALGGGHAL 256
             A +    ++LG+  GA S +F  L+    K      F +    LP I+  ALGG  A 
Sbjct: 348 KSAAELPLYLILGMLCGAVSVVFSRLVTWFTKS---FDFIKDKFGLPAIVCPALGGLGAG 404

Query: 257 IFSL-----------------FTGNF----GITFLLLLLLLKSIHTILSYTSGAPGGLFL 295
           I +L                  TG      GI  L  L   K + T L   SG  GGL+ 
Sbjct: 405 IIALKYPGILYWGFTNVEEILHTGKSASAPGIWLLAQLAAAKVVATALCKGSGLVGGLYA 464

Query: 296 PSLAIGAIIGKLF--------------VETFGVSNTFVLAGMVGVLSGTLRAPMTGAILM 341
           PSL IGA +G +F                       + L GM   L+     P+T  +L+
Sbjct: 465 PSLMIGAAVGAVFGGSAAEIINRAIPGNAAVAQPQAYALVGMAATLASMCSVPLTSVLLL 524

Query: 342 AEITKSPRGFLDFLVA-GLSSYATSYA 367
            E+TK  R  L  + A GL+ +  S A
Sbjct: 525 FELTKDYRILLPLMGAVGLAIWVPSVA 551


>gi|11499010 chloride channel, putative [Archaeoglobus fulgidus]
           >gi|7482945|pir||F69426 chloride channel, probable,
           homolog - Archaeoglobus fulgidus
           >gi|2649157|gb|AAB89832.1| (AE001006) chloride channel,
           putative [Archaeoglobus fulgidus]
           Length = 589
           
 Score = 89.7 bits (219), Expect = 5e-17
 Identities = 68/292 (23%), Positives = 127/292 (43%), Gaps = 38/292 (13%)

Query: 91  RVIVGKIIGHLLALISGLSLGKAGPSIQLG-------GSIAMIFSK-KKVLIGAGAAAGL 142
           RV + K I   + + SG S G+ GP  Q+G       G +  +  K +++L+  G A G+
Sbjct: 115 RVPIVKTIASAITIGSGGSAGREGPIAQIGAGFGSFVGELLRLSDKDRRILVICGVAGGI 174

Query: 143 SAAFEAPIAGIVSTFEIL-----RIEVTPPAILYLAIPSLISALISHY----------LF 187
            + F +P  G +   E+L      +E   PA +   +  ++  +I  Y          +F
Sbjct: 175 GSIFRSPFGGAMFGIEVLYKRDNEVEAIVPAFVSSIVAFIVFDVIMSYFANTPFGVLPIF 234

Query: 188 PVRPTLVYTPSEAKDYQYLILLGVTTGAYSSLFIWLIKHIRKIKLIIPFFE-------SW 240
            +    +++P E   Y  + +L    G       + + +  K   I P+F+       + 
Sbjct: 235 KIPQVTIHSPLEFPIYAIVSVLAAFFGIIYVKVFYTVHNYSKRVSIPPYFKPAIGGFFTG 294

Query: 241 ILLPIMPLALGGGHALIFSLFTGNFGITFLLLLLLLKSIHTILSYTSGAPGGLFLPSLAI 300
           ++   +P  LG G+  +     G   +T +LLL+  K + T L+  +G  GG+F PS+ I
Sbjct: 295 VIGLFLPGVLGMGYGYVQMAIDGKLAVTVMLLLIFGKIVATSLTVGTGGSGGVFAPSIVI 354

Query: 301 GAIIG--------KLFVETFGVSNTFVLAGMVGVLSGTLRAPMTGAILMAEI 344
           G+++G         LF         FVL GM   ++   + P+   +++ E+
Sbjct: 355 GSMVGGFVGYSFHYLFPNVIVQPEAFVLIGMSAFVAAVAKTPIAAILMVLEM 406


>gb|AAK43299.1| Conserved hypothetical protein [Sulfolobus solfataricus]
           Length = 595
           
 Score = 84.3 bits (205), Expect = 2e-15
 Identities = 84/315 (26%), Positives = 135/315 (42%), Gaps = 44/315 (13%)

Query: 92  VIVGKIIGHLLALISGLSLGKAGPSIQLGGSIAMIFSK--------KKVLIGAGAAAGLS 143
           VI  KII   + + SG S G+ GP+ Q    +  + +         ++  +  G  AG+ 
Sbjct: 130 VIPVKIIASAITIGSGGSAGREGPTAQFSAGVGSVIADLLHLSPEDRRRAVAVGIGAGIG 189

Query: 144 AAFEAPIAGIVSTFEILRIEVTPPAILYLAIPSLISALISHYLF-------PVRP--TLV 194
             F+ PI G +   EIL      P ++Y   P+LI++ I + +F       PV    T  
Sbjct: 190 TIFKTPIGGAILAAEILYRRDLEPEVIY---PALIASAIGYTIFGSIFGFTPVFGYYTGT 246

Query: 195 YTPSEAKDYQYLILL-GVTTGAYSSLFIWLIKHIRKIKLI------IPFFESWILLPIMP 247
           + P     Y  L L+ G+    Y   F  +    +K+++       I    + ++  + P
Sbjct: 247 FDPLRLPMYAVLGLVSGLVAILYPKTFYGINSLFKKLRITDHVKPAIGGLVTGVIALLAP 306

Query: 248 LALGGGHALI--------FSLFTGNFGITFLLLLL-LLKSIHTILSYTSGAPGGLFLPSL 298
             LG G+  I        F+L++       L+++L  LK I T  S  SG  GG+F P L
Sbjct: 307 EILGTGYGWINLVEYEKFFALYSPVLPAIILIVILPFLKIIATSFSVGSGGSGGVFAPGL 366

Query: 299 AIGAIIGK--------LFVETFGVSNTFVLAGMVGVLSGTLRAPMTGAILMAEITKSPRG 350
            IGA IG         LF         FV+ GM+   +G  + P++  I++ E+T S + 
Sbjct: 367 FIGAYIGASIGLMFHYLFPSVVPDIAPFVIIGMMSFFAGAGKVPLSVLIMVTEMTSSLQL 426

Query: 351 FLDFLVAGLSSYATS 365
               +VA   SY  S
Sbjct: 427 LPGAMVAVAISYLVS 441


>gb|AAF49542.1| (AE003528) CG5284 gene product [Drosophila melanogaster]
           Length = 732
           
 Score = 84.3 bits (205), Expect = 2e-15
 Identities = 98/386 (25%), Positives = 163/386 (41%), Gaps = 77/386 (19%)

Query: 34  LARNAQERPVLLVIWIVLTLFSYYIISRLLNR--EPNIARGGILQIKEVISG--TRDYNP 89
           L RN     ++  IW VL    +  +S  L R   P     GI +IK ++SG   R Y  
Sbjct: 150 LDRNGTGPYIVAYIWYVLWALLFASLSASLVRMFAPYACGSGIPEIKTILSGFIIRGYLG 209

Query: 90  VRVIVGKIIGHLLALISGLSLGKAGPSIQLGGSIAMIFS-----------KKKVLIGAGA 138
              ++ K +G +L++ +GL+LGK GP + +   I  IFS           KK+ ++ A A
Sbjct: 210 KWTLLIKSVGLMLSVSAGLTLGKEGPMVHIASCIGNIFSHVFPKYGRNEAKKREILSAAA 269

Query: 139 AAGLSAAFEAPIAGIVSTFEILRIEVTPPAILYLAIPSLISALISHYLFPV--RPTLVYT 196
           AAG+S AF API G++ + E +        +      +LI+A +   L P     ++++ 
Sbjct: 270 AAGVSVAFGAPIGGVLFSLEEVSYYFPLKTLWRSFFCALIAAFVLRSLTPFGNEHSVLFF 329

Query: 197 PSEAKDYQY-----LILLGVTTGAYSSLFI----WLIKHIRKIK---------LIIPFFE 238
               K + +      + LG+  G   + FI    W  ++ +  K         L +    
Sbjct: 330 VEYNKPWIFFELIPFVFLGIMGGVIGTFFIKANLWWCRYRKFSKLGQYPVMEVLFVTLVT 389

Query: 239 SWILLPIMPLALGGGHALIF---------------------SLFTGN------------- 264
           + I  P  P      + LIF                     ++ +GN             
Sbjct: 390 AIICYP-NPFTRMNMNELIFLLVSKCSPGDVTNPLCDYKRMNITSGNSFIEVTEPGPGVY 448

Query: 265 FGITFLLLLLLLKSIHTILSYTSGAPGGLFLPSLAIGAIIGKLF---VETFGVS--NTFV 319
             I  L+L  +LK   TI ++    P GLF+PSL +GAI+G++    VE F  S  N + 
Sbjct: 449 SSIWLLMLTFILKLALTIFTFGMKVPAGLFIPSLLLGAIMGRIVGIGVEQFAYSYPNIWF 508

Query: 320 LAGMVGVLSGTLR--APMTGAILMAE 343
              ++  L+G +R   P+  A + ++
Sbjct: 509 FTVIMFELTGGVRYIVPLMAAAMASK 534


>pir||T39817 hypothetical protein SPBC19C7.11 - fission yeast
           (Schizosaccharomyces pombe) >gi|3218415|emb|CAA19579.1|
           (AL023859) chloride channel [Schizosaccharomyces pombe]
           Length = 812
           
 Score = 83.9 bits (204), Expect = 3e-15
 Identities = 106/404 (26%), Positives = 173/404 (42%), Gaps = 106/404 (26%)

Query: 48  WIVLTLFS--YYIISRLLNRE--PNIARGGILQIKEVISG-TRD-YNPVRVIVGKIIGHL 101
           +++ T F+  + + + ++ R+  P  A  GI +IK +ISG  RD +   RV++ K +G  
Sbjct: 180 YLIYTAFALLFVLCAAIMVRDVAPLAAGSGISEIKCIISGFLRDSFLSFRVMLVKCVGLP 239

Query: 102 LALISGLSLGKAGPSIQL----GGSIAMIFS-------KKKVLIGAGAAAGLSAAFEAPI 150
           LA+ SGLS+GK GPS+ L    G +I+ IF        + + +  A AA+G++ AF +PI
Sbjct: 240 LAIASGLSVGKEGPSVHLATTIGHNISKIFKYAREGSIRYRDICVASAASGVAVAFGSPI 299

Query: 151 AGIVSTFEILR-IEV------------TPPAILYLAIPSLISALISHYLFPVRPTLV--- 194
            G++   E+ + IE+             P  I+Y     L +  + H L P R   V   
Sbjct: 300 GGVLFGIEVGKFIEILTNSFKEMSGGYDPKMIVYSFFCCLSAVGVLHMLNPFRTGQVVLF 359

Query: 195 ---YTPS----EAKDYQYLILLGVTTGAYSSLFIWLIKHIRK----------------IK 231
              Y+ S    E   + +L + G   G +     +LI+ +RK                I 
Sbjct: 360 EVRYSGSWHFFELLFFCFLGIFGGLYGEFVMRLFFLIQKLRKKYLSRWGVLDAAFVTVIT 419

Query: 232 LIIPFFESWILLPIMPLALGGGHALIF-----------------SLFTGNFGITFLLLLL 274
            ++ F   W+ L +       G  L+F                 SL T N     LL+  
Sbjct: 420 SLVSFLNPWLRLDMTL-----GMELLFQECKSSSSPELINLCDPSLRTKN--TILLLIAT 472

Query: 275 LLKSIHTILSYTSGAPGGLFLPSLAIGAIIG-----------------KLFVETFG---- 313
             ++I    SY +  P G+F+PS+A+GA  G                  LF+   G    
Sbjct: 473 FARTIFVTFSYGAKVPAGIFVPSMAVGASFGYMIGLIAEMIYQRFPNSVLFLACHGSESC 532

Query: 314 -VSNTFVLAGMVGVLSGTLRAPMTGAILMAEITKSPRGFLDFLV 356
               T+ L G    LSG +   +T  ++M E+T    G L+F++
Sbjct: 533 ITPGTYALLGAAASLSGIMHLTVTIVVIMFELT----GALNFIL 572


>emb|CAC12582.1| (AL445067) chloride channel (CLC-3) related protein [Thermoplasma
           acidophilum]
           Length = 589
           
 Score = 73.7 bits (178), Expect = 3e-12
 Identities = 77/316 (24%), Positives = 137/316 (42%), Gaps = 44/316 (13%)

Query: 91  RVIVGKIIGHLLALISGLSLGKAGPSIQ----LGGSIAMIF----SKKKVLIGAGAAAGL 142
           R+ V K I   + + SG S G+ GP+ Q    LG  +A +     S +++ +  G  +G+
Sbjct: 120 RIPVVKTIASAITIGSGGSAGREGPTAQISAGLGSMVADLLGLSDSDRRIAVAVGIGSGI 179

Query: 143 SAAFEAPIAGIVSTFEILRIEVTPPAILYLAIPSLISALISHYLFP----VRPTL-VYTP 197
              F+ PI G +   EIL         +Y   PSL++  I + +F       P    YT 
Sbjct: 180 GTIFKTPIGGTMLGAEILYKRDLETQAIY---PSLVANAIGYSIFASVVGFEPIFGYYTG 236

Query: 198 S-EAKDYQYLILLGVTTGA----YSSLFIWLIKHIRKIKL------IIPFFESWILLPIM 246
           S   +   Y  +LGV +G     Y   F +++   +++++      +I    + ++    
Sbjct: 237 SFNVERIPYYAILGVISGLFAIFYVRFFYFMVSVFKRMRISNYYKPVIGGAVTGLIALAF 296

Query: 247 PLALGGGHA----LIFSLFT--GNFGITFLLLLLLL---KSIHTILSYTSGAPGGLFLPS 297
           P  +  G+     L+F  F     FGI  L++L+ L   K   T  +  SG  GG++ P 
Sbjct: 297 PEIMSTGYGWVDLLMFQKFQYFPTFGIPILIILIALPFVKVFATSFTVGSGGSGGVYAPG 356

Query: 298 LAIGAIIGKLFVETF--------GVSNTFVLAGMVGVLSGTLRAPMTGAILMAEITKSPR 349
           + IGA +G +    F         +   FV+ GM+       + P++  +++ E+T S +
Sbjct: 357 IFIGASLGAVAGLAFHYATPSLVPIITPFVIVGMISFFGAAGKVPLSVILMVVEMTGSLQ 416

Query: 350 GFLDFLVAGLSSYATS 365
                ++A   SY  S
Sbjct: 417 LLPAAMIAVFISYLVS 432


>gb|AAD53928.1|AF179611_12 (AF179611) chloride channel protein [Zymomonas mobilis]
           Length = 425
           
 Score = 70.2 bits (169), Expect = 4e-11
 Identities = 71/328 (21%), Positives = 137/328 (41%), Gaps = 33/328 (10%)

Query: 74  ILQIKEVISGTRDYNPVRVIVGKIIGHLLALISGLSLGKAGPSIQLGGSIAMIFS----- 128
           ++ I + ++  +   P    +  ++  ++ +  G  LG+     +LG  I   F+     
Sbjct: 85  LVSITQAVAANKRVMPFWTTIIHVLLQIVTVGLGSPLGREVAPRELGSLIGERFAFWGGL 144

Query: 129 ---KKKVLIGAGAAAGLSAAFEAPIAGIVSTFEILRIEVTPPAILYLAIPSLISALISHY 185
              ++++L+  GA AG ++ +  P++G +   E L +    P ++   + S +SA ++  
Sbjct: 145 SENQRRILVACGAGAGFASVYNVPLSGALFALEALLMTWASPVVIVALLTSALSARMAWI 204

Query: 186 LFPVRPTLVYT----PSEAKDYQYLILLGVTTGAYSSLF-IWL-------IKHIRKIKL- 232
           L  +  ++VY     P + +     +L G   G  +  F  W        IK  R++ L 
Sbjct: 205 L--LGNSMVYHVPAWPVDTRLMLLALLAGPIFGIAAHYFRFWSQKITASRIKDNRRLALV 262

Query: 233 -IIPFFESWILLPIMPLALGGGHALIFSLFTGNFGITFLLLLLLLKSIHTILSYTSGAPG 291
            I+ F    +L    P  LG G   +   F  N        L   K +   L+  +GA G
Sbjct: 263 AILCFAAIGLLSMWFPEILGNGKGPVSLAFNDNLSGMKAGELFCFKILAVFLALWAGAYG 322

Query: 292 GLFLPSLAIGAIIGKLFVETFGV------SNTFVLAGMVGVLSGTLRAPMTGAILMAEIT 345
           GL  P ++ GA++  +    + +         F + G    L+ +++ P+T   L+ E  
Sbjct: 323 GLLTPGISFGALLAVVIGHLWNMWLPPVPIGAFAIIGGAAFLASSMKMPITAMALVIEFA 382

Query: 346 KSPRGFL---DFLVAGLSSYATSYALKK 370
           ++   FL    F VAG  + +  Y  KK
Sbjct: 383 RTGHDFLIPIAFAVAGSIAISQFYDQKK 410


  Database: ./suso.pep
    Posted date:  Jul 6, 2001  5:57 PM
  Number of letters in database: 840,471
  Number of sequences in database:  2977
  
  Database: /banques/blast2/nr.pep
    Posted date:  Dec 14, 2000 12:46 PM
  Number of letters in database: 188,266,275
  Number of sequences in database:  595,510
  
Lambda     K      H
   0.326    0.144    0.412 

Gapped
Lambda     K      H
   0.270   0.0470    0.230 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 134568336
Number of Sequences: 2977
Number of extensions: 5836014
Number of successful extensions: 19534
Number of sequences better than 1.0e-10: 18
Number of HSP's better than  0.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 19461
Number of HSP's gapped (non-prelim): 25
length of query: 379
length of database: 189,106,746
effective HSP length: 55
effective length of query: 324
effective length of database: 156,189,961
effective search space: 50605547364
effective search space used: 50605547364
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 40 (21.6 bits)
S2: 166 (69.1 bits)