BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB2013 (PAB2013) DE:Hypothetical protein
(451 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||D75170 hypothetical protein PAB2013 - Pyrococcus abyssi (st... 890 0.0
pir||E71044 hypothetical protein PH1645 - Pyrococcus horikoshii ... 753 0.0
gb|AAD48400.1|AF127909_1 (AF127909) phosphofructokinase [Pyrococ... 691 0.0
gb|AAF97356.1| (AY005811) ADP-dependent phosphofructokinase [The... 613 e-174
pir||C64500 hypothetical protein MJ1604 - Methanococcus jannasch... 436 e-121
gb|AAD48401.1|AF127910_1 (AF127910) glucokinase [Pyrococcus furi... 191 1e-47
pir||B75058 hypothetical protein PAB0967 - Pyrococcus abyssi (st... 189 6e-47
pir||A71174 hypothetical protein PH0589 - Pyrococcus horikoshii ... 185 1e-45
>pir||D75170 hypothetical protein PAB2013 - Pyrococcus abyssi (strain Orsay)
>gi|5457953|emb|CAB49443.1| (AJ248284) hypothetical
protein [Pyrococcus abyssi]
Length = 451
Score = 890 bits (2274), Expect = 0.0
Identities = 451/451 (100%), Positives = 451/451 (100%)
Query: 1 MSVPQDVSIFTAYNANVDAITKLNGETIQKLINEFGEKEIAERIEEYPREIREPIDFVAR 60
MSVPQDVSIFTAYNANVDAITKLNGETIQKLINEFGEKEIAERIEEYPREIREPIDFVAR
Sbjct: 1 MSVPQDVSIFTAYNANVDAITKLNGETIQKLINEFGEKEIAERIEEYPREIREPIDFVAR 60
Query: 61 LIHALRLGKPTAVPLVDESLNSWFDEKFEYELERLGGQAGIIANVLAGLGIKKVIAYTPF 120
LIHALRLGKPTAVPLVDESLNSWFDEKFEYELERLGGQAGIIANVLAGLGIKKVIAYTPF
Sbjct: 61 LIHALRLGKPTAVPLVDESLNSWFDEKFEYELERLGGQAGIIANVLAGLGIKKVIAYTPF 120
Query: 121 LPKRLADLFKEGVLYPTVENGELKLKPIREAYRDEDPLKINRIFEFRKGTKFKFLGESVE 180
LPKRLADLFKEGVLYPTVENGELKLKPIREAYRDEDPLKINRIFEFRKGTKFKFLGESVE
Sbjct: 121 LPKRLADLFKEGVLYPTVENGELKLKPIREAYRDEDPLKINRIFEFRKGTKFKFLGESVE 180
Query: 181 VPASGRFIVSARFESISKIETKEELRPFLDDIGKEVDGAIFSGYQGLRLKYSDGKDANYY 240
VPASGRFIVSARFESISKIETKEELRPFLDDIGKEVDGAIFSGYQGLRLKYSDGKDANYY
Sbjct: 181 VPASGRFIVSARFESISKIETKEELRPFLDDIGKEVDGAIFSGYQGLRLKYSDGKDANYY 240
Query: 241 LRRAKEDIISLKEEDVKVHVELASIQDRKLRKKVITNILPIADSVGIDEAEIAQLLSVLG 300
LRRAKEDIISLKEEDVKVHVELASIQDRKLRKKVITNILPIADSVGIDEAEIAQLLSVLG
Sbjct: 241 LRRAKEDIISLKEEDVKVHVELASIQDRKLRKKVITNILPIADSVGIDEAEIAQLLSVLG 300
Query: 301 YRDLADRIFTYNRLEDSILGGMIILDELNFEILQVHTIYYLMYITHRDNPLSEEELMKSL 360
YRDLADRIFTYNRLEDSILGGMIILDELNFEILQVHTIYYLMYITHRDNPLSEEELMKSL
Sbjct: 301 YRDLADRIFTYNRLEDSILGGMIILDELNFEILQVHTIYYLMYITHRDNPLSEEELMKSL 360
Query: 361 EFGTTLAAARASLGDINRPEDYEIGLKVPFNERSEYVKLRFEEAKTKLRMREYKVVVIPT 420
EFGTTLAAARASLGDINRPEDYEIGLKVPFNERSEYVKLRFEEAKTKLRMREYKVVVIPT
Sbjct: 361 EFGTTLAAARASLGDINRPEDYEIGLKVPFNERSEYVKLRFEEAKTKLRMREYKVVVIPT 420
Query: 421 RLVPNPVLTVGLGDTISAGAFITYVNYLKRH 451
RLVPNPVLTVGLGDTISAGAFITYVNYLKRH
Sbjct: 421 RLVPNPVLTVGLGDTISAGAFITYVNYLKRH 451
>pir||E71044 hypothetical protein PH1645 - Pyrococcus horikoshii
>gi|3258074|dbj|BAA30757.1| (AP000006) 450aa long
hypothetical protein [Pyrococcus horikoshii]
Length = 450
Score = 753 bits (1924), Expect = 0.0
Identities = 368/449 (81%), Positives = 408/449 (89%)
Query: 3 VPQDVSIFTAYNANVDAITKLNGETIQKLINEFGEKEIAERIEEYPREIREPIDFVARLI 62
+P+ +SI+TAYNAN+DAI KLN ETIQ LIN F E+ RIEEYPREI EPIDFVARL+
Sbjct: 2 IPEHLSIYTAYNANIDAIVKLNQETIQNLINAFDPDEVKRRIEEYPREINEPIDFVARLV 61
Query: 63 HALRLGKPTAVPLVDESLNSWFDEKFEYELERLGGQAGIIANVLAGLGIKKVIAYTPFLP 122
H L+LGKP AVPLV+E +N WFD+ F YE ERLGGQAGIIAN LAGL I+KVIAYTPFLP
Sbjct: 62 HTLKLGKPAAVPLVNEKMNEWFDKTFRYEEERLGGQAGIIANTLAGLKIRKVIAYTPFLP 121
Query: 123 KRLADLFKEGVLYPTVENGELKLKPIREAYRDEDPLKINRIFEFRKGTKFKFLGESVEVP 182
KRLA+LFK+GVLYP VENGEL+ KPI+EAYR+ DPLKINRIFEFRKG KFK E++E+P
Sbjct: 122 KRLAELFKKGVLYPVVENGELQFKPIQEAYREGDPLKINRIFEFRKGLKFKLGDETIEIP 181
Query: 183 ASGRFIVSARFESISKIETKEELRPFLDDIGKEVDGAIFSGYQGLRLKYSDGKDANYYLR 242
SGRFIVSARFESIS+IET+E+++PFL +IGKEVDGAIFSGYQGLR KYSDGKDANYYLR
Sbjct: 182 NSGRFIVSARFESISRIETREDIKPFLGEIGKEVDGAIFSGYQGLRTKYSDGKDANYYLR 241
Query: 243 RAKEDIISLKEEDVKVHVELASIQDRKLRKKVITNILPIADSVGIDEAEIAQLLSVLGYR 302
RAKEDII KE+DVK+HVE AS+QDRKLRKK+ITNILP DSVGIDEAEIAQ+LSVLGYR
Sbjct: 242 RAKEDIIEFKEKDVKIHVEFASVQDRKLRKKIITNILPFVDSVGIDEAEIAQILSVLGYR 301
Query: 303 DLADRIFTYNRLEDSILGGMIILDELNFEILQVHTIYYLMYITHRDNPLSEEELMKSLEF 362
+LADRIFTYNRLEDSILGGMIILDELNFEILQVHT YYLMYITHRDNPLSEEEL KSLEF
Sbjct: 302 ELADRIFTYNRLEDSILGGMIILDELNFEILQVHTTYYLMYITHRDNPLSEEELAKSLEF 361
Query: 363 GTTLAAARASLGDINRPEDYEIGLKVPFNERSEYVKLRFEEAKTKLRMREYKVVVIPTRL 422
GTTLAAARASLGDI P+DY++GLKVPFNERSEYVKLRFEEAK++LRMREYKVVVIPTRL
Sbjct: 362 GTTLAAARASLGDIRGPDDYKVGLKVPFNERSEYVKLRFEEAKSRLRMREYKVVVIPTRL 421
Query: 423 VPNPVLTVGLGDTISAGAFITYVNYLKRH 451
V NPVLTVGLGDTISAGAF+TY+ +LKRH
Sbjct: 422 VQNPVLTVGLGDTISAGAFLTYLEFLKRH 450
>gb|AAD48400.1|AF127909_1 (AF127909) phosphofructokinase [Pyrococcus furiosus]
Length = 454
Score = 691 bits (1764), Expect = 0.0
Identities = 333/448 (74%), Positives = 393/448 (87%), Gaps = 1/448 (0%)
Query: 5 QDVSIFTAYNANVDAITKLNGETIQKLINEFGEKEIAERIEEYPREIREPIDFVARLIHA 64
+++ I+TAYNANVDAI LN E IQ+LI EFG +I R+EEYPREI EP+DFVARL+HA
Sbjct: 6 RELGIYTAYNANVDAIVNLNAEIIQRLIEEFGPDKIKRRLEEYPREINEPLDFVARLVHA 65
Query: 65 LRLGKPTAVPLVDESLNSWFDEKFEYELERLGGQAGIIANVLAGLGIKKVIAYTPFLPKR 124
L+ GKP AVPLV+E L+ WFD+ F+Y+ ER+GGQAGIIAN+L GL +KKVIAYTPFLPKR
Sbjct: 66 LKTGKPMAVPLVNEELHQWFDKTFKYDTERIGGQAGIIANILVGLKVKKVIAYTPFLPKR 125
Query: 125 LADLFKEGVLYPTVENGELKLKPIREAYRDEDPLKINRIFEFRKGTKFKFLGESVEVPAS 184
LA+LFKEG+LYP VE +L LKPI+ AYR+ DPLK+NRIFEFRKGT+FK E +EVP S
Sbjct: 126 LAELFKEGILYPVVEEDKLVLKPIQSAYREGDPLKVNRIFEFRKGTRFKLGDEVIEVPHS 185
Query: 185 GRFIVSARFESISKIETKEELRPFLDDIGKEVDGAIFSGYQGLRLKYSDGKDANYYLRRA 244
GRFIVS+RFESIS+IETK+ELR FL +IG+ VDGAI SGYQG+RL+YSDGKDANYYLRRA
Sbjct: 186 GRFIVSSRFESISRIETKDELRKFLPEIGEMVDGAILSGYQGIRLQYSDGKDANYYLRRA 245
Query: 245 KEDIISLKE-EDVKVHVELASIQDRKLRKKVITNILPIADSVGIDEAEIAQLLSVLGYRD 303
KEDI LK+ +D+K+HVE ASIQDR+LRKKV+ NI P+ DSVG+DEAEIA +LSVLGY D
Sbjct: 246 KEDIRLLKKNKDIKIHVEFASIQDRRLRKKVVNNIFPMVDSVGMDEAEIAYILSVLGYSD 305
Query: 304 LADRIFTYNRLEDSILGGMIILDELNFEILQVHTIYYLMYITHRDNPLSEEELMKSLEFG 363
LADRIF YNR+ED+ILGGMIILDELNFEILQVHTIYYLMYITHRDNPLSEEELM+SL+FG
Sbjct: 306 LADRIFMYNRIEDAILGGMIILDELNFEILQVHTIYYLMYITHRDNPLSEEELMRSLDFG 365
Query: 364 TTLAAARASLGDINRPEDYEIGLKVPFNERSEYVKLRFEEAKTKLRMREYKVVVIPTRLV 423
T LAA RASLGDIN P D ++G+ VP+NERSEY+KLRFEEAK KLR++EYKVV++PTRLV
Sbjct: 366 TILAATRASLGDINDPRDVKVGMSVPYNERSEYIKLRFEEAKRKLRLKEYKVVIVPTRLV 425
Query: 424 PNPVLTVGLGDTISAGAFITYVNYLKRH 451
PNPV TVGLGDTIS G F++Y++ L+RH
Sbjct: 426 PNPVSTVGLGDTISTGTFLSYLSLLRRH 453
>gb|AAF97356.1| (AY005811) ADP-dependent phosphofructokinase [Thermococcus
zilligii]
Length = 461
Score = 613 bits (1563), Expect = e-174
Identities = 303/446 (67%), Positives = 368/446 (81%), Gaps = 4/446 (0%)
Query: 7 VSIFTAYNANVDAITKLNGETIQKLINEFGEKEIAERIEEYPREIREPIDFVARLIHALR 66
+SI+TAYN NVDAI LNGET+Q+LI+EFG + +R+E+YPREI EP+DFVARL+HAL+
Sbjct: 12 LSIYTAYNTNVDAIVYLNGETVQRLIDEFGADAVRKRMEDYPREINEPLDFVARLVHALK 71
Query: 67 LGKPTAVPLVDESLNSWFDEKFEYELERLGGQAGIIANVLAGLGIKKVIAYTPFLPKRLA 126
GKP AVPLV+E L++WFD F Y++ER+GGQAGIIAN+L+ L ++VI YTP L KR A
Sbjct: 72 TGKPMAVPLVNEELHTWFDSHFRYDVERMGGQAGIIANLLSNLDFREVIVYTPHLAKRQA 131
Query: 127 DLF--KEGVLYPTVENGELKLKPIREAYRDEDPLKINRIFEFRKGTKFKFLGESVEVPAS 184
++F K + YP VE G L LK EAYR+ DP+K+NRIFEFR GT FK E + VP S
Sbjct: 132 EMFVRKPNLFYPVVEGGRLVLKHPWEAYREGDPVKVNRIFEFRAGTAFKLGDERIVVPFS 191
Query: 185 GRFIVSARFESISKIETKEELRPFLDDIGKEVDGAIFSGYQGLRLKYSDGKDANYYLRRA 244
GRFIVSARFESI +I T+ LRPFL +IG+ VDGAI SGYQG+ L+YSDGKDANYYLR+A
Sbjct: 192 GRFIVSARFESI-RIYTEPGLRPFLPEIGERVDGAILSGYQGINLRYSDGKDANYYLRKA 250
Query: 245 KEDIISLK-EEDVKVHVELASIQDRKLRKKVITNILPIADSVGIDEAEIAQLLSVLGYRD 303
KEDI+ LK E+D+KVH+E ASIQ R+LRKKVI N+ P+ADSVG+DEAEIA +LS LGY +
Sbjct: 251 KEDIMLLKREKDLKVHLEFASIQSRELRKKVIYNLFPLADSVGMDEAEIAYVLSALGYDE 310
Query: 304 LADRIFTYNRLEDSILGGMIILDELNFEILQVHTIYYLMYITHRDNPLSEEELMKSLEFG 363
LADRIFTYNR+ED++LGG I+LDE+N ++LQ+HTIYY+MYITH DNPLSEEEL +SLE
Sbjct: 311 LADRIFTYNRIEDTVLGGKILLDEMNLDVLQIHTIYYIMYITHADNPLSEEELRRSLELA 370
Query: 364 TTLAAARASLGDINRPEDYEIGLKVPFNERSEYVKLRFEEAKTKLRMREYKVVVIPTRLV 423
TTLAA+RASLGDI P+ EIGL+VP+NER EYVKLRFEEAK KLR +EYK+V+IPTRLV
Sbjct: 371 TTLAASRASLGDITSPDQIEIGLRVPYNERGEYVKLRFEEAKRKLRTKEYKLVIIPTRLV 430
Query: 424 PNPVLTVGLGDTISAGAFITYVNYLK 449
NPV TVGLGDTIS GAF +Y+ LK
Sbjct: 431 QNPVSTVGLGDTISTGAFASYLAMLK 456
>pir||C64500 hypothetical protein MJ1604 - Methanococcus jannaschii
>gi|1500501|gb|AAB99627.1| (U67600) M. jannaschii
predicted coding region MJ1604 [Methanococcus
jannaschii]
Length = 462
Score = 436 bits (1109), Expect = e-121
Identities = 227/447 (50%), Positives = 315/447 (69%), Gaps = 12/447 (2%)
Query: 9 IFTAYNANVDAITKLNGETIQKLINEFGEKEIAERIEEYPREIREPIDFVARLIHALRLG 68
+FTAYN NVDAI L E +QKL++EF K+I ER+EEYPR I EP+DFVARL+H+++ G
Sbjct: 19 LFTAYNTNVDAIKYLKDEDVQKLVDEFNHKDIIERMEEYPRIIEEPLDFVARLVHSIKTG 78
Query: 69 KPTAVPLVDE-SLNSWFDEKFEYELERLGGQAGIIANVLAGLGIKKVIAYTPFLPKRLAD 127
KP VP+ D+ L+ WFD + +Y+ ER+GGQAGI++N++A L I K+I YTPFL K+ A+
Sbjct: 79 KPAEVPIKDDKKLHEWFD-RIKYDEERMGGQAGIVSNLMATLQIDKIIVYTPFLSKKQAE 137
Query: 128 LF--KEGVLYPTVENGELKLKPIREAYRDEDPLKINRIFEFRKGTKFKFLGESVEVPASG 185
+F + +LYP VENG L LK +REAYRD DP+KINRIFEF+KG KFK GE + S
Sbjct: 138 MFVDYDNLLYPLVENGNLVLKKVREAYRD-DPIKINRIFEFKKGLKFKLNGEEITAKQST 196
Query: 186 RFIVSARFESISKIETKEELRPFLDDIGKEVDGAIFSGYQGLRLKYSDGKDANYYLRRAK 245
RFIV++R E++ +IE K+++R FL IG+ VD A SGYQ ++ +Y DGK A YY RA+
Sbjct: 197 RFIVASRPEAL-RIEIKDDVRKFLPKIGEAVDCAFLSGYQAIKEEYRDGKTAKYYFERAE 255
Query: 246 EDIISLKE-EDVKVHVELASIQDRKLRKKVITNILPIADSVGIDEAEIAQLLSVLGYRDL 304
EDI LK+ +++K H+E ASI + ++RK V+ IL +SVG+DE EIA +L +LGY +L
Sbjct: 256 EDIKLLKKNKNIKTHLEFASISNIEIRKMVVDYILSNVESVGMDETEIANVLHILGYDEL 315
Query: 305 ADRIFTYNRLEDSILGGMIILDEL-NFEILQVHTIYYLMYITHRDNPLSEEELMKSLEFG 363
++ I + +ED I G I+LD+ N E++QVHTIYY++++ DNPLS+EEL + LEF
Sbjct: 316 SNNILKDSFIEDVIEGAKILLDKFKNLEVVQVHTIYYILFVCRADNPLSKEELEECLEFS 375
Query: 364 TTLAAARASLGDINRPEDYEIGLKVPFNERSEYVKLRFEEAKTKLRMREYKVVVIPTRLV 423
T LA+ +A LG+I +D GLK+P N+ + +K E K YK+ + P+R V
Sbjct: 376 TILASTKAKLGNIRAIDDLHEGLKIPHNKYGDLLK----EIAEKFNDNNYKIALSPSRYV 431
Query: 424 PNPVLTVGLGDTISAGAFITYVNYLKR 450
P TVGLGDTIS+GAF+ YV+ L +
Sbjct: 432 EKPKSTVGLGDTISSGAFVYYVSLLNK 458
>gb|AAD48401.1|AF127910_1 (AF127910) glucokinase [Pyrococcus furiosus]
Length = 455
Score = 191 bits (481), Expect = 1e-47
Identities = 141/454 (31%), Positives = 244/454 (53%), Gaps = 36/454 (7%)
Query: 2 SVPQDVSIFTAYNANVDAITKLNGETIQKLINEFGEKEIAERIEEYPREIREPIDFVARL 61
SVP+ + YN N+DAI L+ + +++ I + G++E+ + EE P +I + +
Sbjct: 18 SVPKVKGVLLGYNTNIDAIKYLDSKDLEERIIKAGKEEVIKYSEELPDKINTVSQLLGSI 77
Query: 62 IHALRLGKPTAVPLVDESLNSWFDEKFEYELERLGGQAGIIANVLAGLGIKKVIAYTPFL 121
+ ++R GK A V+ ++ +++ + R+GGQAGI+AN+L G+ VI + P L
Sbjct: 78 LWSIRRGK-AAELFVESCPVRFYMKRWGWNELRMGGQAGIMANLLGGVYGVPVIVHVPQL 136
Query: 122 PKRLADLFKEGVLY-PTVENGELKLKPIREAYRDEDPLKINRIFEFRKGTK-FKFLGESV 179
+ A+LF +G +Y PT+ENGE+KL +E DE+ I+ I+EF +G + F+F
Sbjct: 137 SRLQANLFLDGPIYVPTLENGEVKLIHPKEFSGDEENC-IHYIYEFPRGFRVFEF----- 190
Query: 180 EVPASGRFIVSARFESISKIETKEELRPFLDDIGKEVDGAIFSGYQGLRLKYSDGKDANY 239
E P RFI SA + + + +EE R ++ K V AI SG Q L + NY
Sbjct: 191 EAPRENRFIGSAD-DYNTTLFIREEFRESFSEVIKNVQLAILSGLQALTKE-------NY 242
Query: 240 Y--LRRAKEDIISLKEEDVKVHVELASIQDRKLRKKVITNILPIADSVGIDEAEIAQLLS 297
K ++ L E ++ VH+E A D K+R++++ N+L + SVG++E E+A ++
Sbjct: 243 KEPFEIVKSNLEVLNEREIPVHLEFAFTPDEKVREEIL-NVLGMFYSVGLNEVELASIME 301
Query: 298 VLGYRDLADRIFTYNRLED-SILGGMI-ILDELNFEILQVHTIYYLMYITHRDNPLSEEE 355
+LG + LA + ++ ++ ++ M+ + + + + HT Y + +T E
Sbjct: 302 ILGEKKLAKELLAHDPVDPIAVTEAMLKLAKKTGVKRIHFHTYGYYLALTE----YKGEH 357
Query: 356 LMKSLEFGTTLAAARASLGDINRPEDYEIGLKVPFNERSEYVKLRFEEAKTKLRMRE--- 412
+ +L F AAA+A G+I E+ VP NE++ V+ E+ + + ++E
Sbjct: 358 VRDALLFAALAAAAKAMKGNITSLEEIREATSVPVNEKATQVE---EKLRAEYGIKEGIG 414
Query: 413 ----YKVVVIPTRLVPNPVLTVGLGDTISAGAFI 442
Y++ IPT++V P TVG+GDTIS+ AFI
Sbjct: 415 EVEGYQIAFIPTKIVAKPKSTVGIGDTISSSAFI 448
>pir||B75058 hypothetical protein PAB0967 - Pyrococcus abyssi (strain Orsay)
>gi|5458872|emb|CAB50359.1| (AJ248287) hypothetical
protein [Pyrococcus abyssi]
Length = 452
Score = 189 bits (475), Expect = 6e-47
Identities = 137/449 (30%), Positives = 237/449 (52%), Gaps = 26/449 (5%)
Query: 2 SVPQDVSIFTAYNANVDAITKLNGETIQKLINEFGEKEIAERIEEYPREIREPIDFVARL 61
S+ + + AYN N+DAI L E +++ I E G+ E+ +E P++I + +
Sbjct: 17 SIGKIKGVMLAYNTNIDAIKYLKREDLERRIEEAGKDEVLRYSDELPKKINTIQQLLGSI 76
Query: 62 IHALRLGKPTAVPLVDESLNSWFDEKFEYELERLGGQAGIIANVLAGLGIKKVIAYTPFL 121
+ +++ GK + + D + ++ ++ ++ R+GGQ GI+AN+L G+ VIA+ P +
Sbjct: 77 LWSVKRGKAAELLVEDREVRNYM-RQWGWDELRMGGQVGIMANLLGGVYGIPVIAHVPQI 135
Query: 122 PKRLADLFKEGVLY-PTVENGELKLKPIREAYRDEDPLKINRIFEFRKGTKFKFLGESVE 180
K A LF +G +Y PT E G + P +ED I+ I+EF +G FK L +
Sbjct: 136 SKLQASLFLDGPIYVPTFEEGLKLVHPRNFEGNEEDC--IHYIYEFPRG--FKVL--NFT 189
Query: 181 VPASGRFIVSARFESISKIETKEELRPFLDDIGKEVDGAIFSGYQGLRLK-YSDGKDANY 239
P RFI +A + KE + F ++I + + AI SG L + Y +
Sbjct: 190 APRENRFIGAADDYNPRLYIRKEWVERF-EEIAERAELAIVSGLHSLTEETYREP----- 243
Query: 240 YLRRAKEDIISLKEEDVKVHVELASIQDRKLRKKVITNILPIADSVGIDEAEIAQLLSVL 299
++ +E + LK+ ++K H+E A D K+R++++ +L + SVG++E E+A +L ++
Sbjct: 244 -IKVVREHLKVLKDLNIKTHLEFAFTADEKVRREIL-GLLSLVYSVGLNEVELASVLEIM 301
Query: 300 GYRDLADRIFTYNRLED-SILGGMIILDELNFEILQVHTIYYLMYITHRDNPLSEEELMK 358
R+LADRI + + +++ G++ L E E + HT Y + IT E +
Sbjct: 302 NERELADRILAKDPADPVAVIEGLMKLIEEGVERIHFHTYGYYLAITKYRG----EHVRD 357
Query: 359 SLEFGTTLAAARASLGDINRPEDYEIGLKVPFNERS----EYVKLRFEEAKTKLRMREYK 414
+L F AA +A LG+I + +D GL+VP + E VK F K + +Y+
Sbjct: 358 ALLFSALAAATKAMLGNIEKLDDLRKGLEVPIGRQGLEVYEVVKREFNVEKGIGEVGDYQ 417
Query: 415 VVVIPTRLVPNPVLTVGLGDTISAGAFIT 443
+ +PT++V P TVG+GDTIS+ AF++
Sbjct: 418 IAFVPTKIVEKPKSTVGIGDTISSSAFVS 446
>pir||A71174 hypothetical protein PH0589 - Pyrococcus horikoshii
>gi|3256995|dbj|BAA29678.1| (AP000002) 457aa long
hypothetical protein [Pyrococcus horikoshii]
Length = 457
Score = 185 bits (464), Expect = 1e-45
Identities = 137/443 (30%), Positives = 236/443 (52%), Gaps = 26/443 (5%)
Query: 9 IFTAYNANVDAITKLNGETIQKLINEFGEKEIAERIEEYPREIREPIDFVARLIHALRLG 68
+ AYN N+DAI L E ++K I + G++E+ EE P+EI + ++ +++ G
Sbjct: 28 VLLAYNTNIDAIKYLKREDLEKRIEKVGKEEVLRYSEELPKEIETIPQLLGSILWSIKRG 87
Query: 69 KPTAVPLVDESLNSWFDEKFEYELERLGGQAGIIANVLAGLGIKKVIAYTPFLPKRLADL 128
K + +V + + K+ ++ R+GGQ GI+AN+L G+ VIA+ P L + A L
Sbjct: 88 KAAELLVVSREVREYM-RKWGWDELRMGGQVGIMANLLGGVYGIPVIAHVPQLSELQASL 146
Query: 129 FKEGVLY-PTVENGELKLKPIREAYRDEDPLKINRIFEFRKGTKFKFLGESVEVPASGRF 187
F +G +Y PT E GEL+L RE + E+ I+ I+EF + FK L E P RF
Sbjct: 147 FLDGPIYVPTFERGELRLIHPREFRKGEEDC-IHYIYEFPR--NFKVL--DFEAPRENRF 201
Query: 188 IVSARFESISKIETKEELRPFLDDIGKEVDGAIFSGYQGLRLKYSDGKDANYYLRRAKED 247
I A + + +EE ++I K + AI SG L + + GK ++ +E
Sbjct: 202 I-GAADDYNPILYVREEWIERFEEIAKRSELAIISGLHPL-TQENHGKP----IKLVREH 255
Query: 248 IISLKEEDVKVHVELASIQDRKLRKKVITNILPIADSVGIDEAEIAQLLSVLGYRDLADR 307
+ L + ++ H+E A D +R +++ +L SVG++E E+A ++SV+G ++LA+R
Sbjct: 256 LKILNDLGIRAHLEFAFTPDEVVRLEIV-KLLKHFYSVGLNEVELASVVSVMGEKELAER 314
Query: 308 IFTYNRLED-SILGGMI-ILDELNFEILQVHTIYYLMYITHRDNPLSEEELMKSLEFGTT 365
I + + + +++ G++ ++ E + + HT Y + +T E + +L F
Sbjct: 315 IISKDPADPIAVIEGLLKLIKETGVKRIHFHTYGYYLALTREKG----EHVRDALLFSAL 370
Query: 366 LAAARASLGDINRPEDYEIGLKVPFNERSEYVKLRFEEAKTKLR-----MREYKVVVIPT 420
AA +A G+I + D GL VP E+ V+ + E + LR + +Y++ IPT
Sbjct: 371 AAATKAMKGNIEKLSDIREGLAVPIGEQGLEVE-KILEKEFSLRDGIGSIEDYQLTFIPT 429
Query: 421 RLVPNPVLTVGLGDTISAGAFIT 443
++V P TVG+GDTIS+ AF++
Sbjct: 430 KVVKKPKSTVGIGDTISSSAFVS 452
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.319 0.140 0.390
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 162305609
Number of Sequences: 2977
Number of extensions: 7019887
Number of successful extensions: 19768
Number of sequences better than 1.0e-10: 8
Number of HSP's better than 0.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 19735
Number of HSP's gapped (non-prelim): 8
length of query: 451
length of database: 189,106,746
effective HSP length: 58
effective length of query: 393
effective length of database: 154,394,500
effective search space: 60677038500
effective search space used: 60677038500
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 166 (69.1 bits)