BLASTP 2.0.10 [Aug-26-1999]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= PAB2021 (phoC-like) DE:ACID PHOSPHATASE PRECURSOR (EC 3.1.3.2)
RELATED PROTEIN
         (185 letters)

Database: ./suso.pep; /banques/blast2/nr.pep
           598,487 sequences; 189,106,746 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

pir||C75169 acid phosphatase related protein PAB2021, precursor ...   371  e-102
pir||A71046 hypothetical protein PH1657 - Pyrococcus horikoshii ...   213  8e-55

>pir||C75169 acid phosphatase related protein PAB2021, precursor - Pyrococcus
           abyssi (strain Orsay) >gi|5457944|emb|CAB49434.1|
           (AJ248284) ACID PHOSPHATASE PRECURSOR (EC 3.1.3.2) RE
           LATED PROTEIN [Pyrococcus abyssi]
           Length = 185
           
 Score =  371 bits (942), Expect = e-102
 Identities = 185/185 (100%), Positives = 185/185 (100%)

Query: 1   MRWKLITLGSLSFAIALLQALGFFNGINEAINSLLPQGGDVVKAVTTLADTHVVLIIITA 60
           MRWKLITLGSLSFAIALLQALGFFNGINEAINSLLPQGGDVVKAVTTLADTHVVLIIITA
Sbjct: 1   MRWKLITLGSLSFAIALLQALGFFNGINEAINSLLPQGGDVVKAVTTLADTHVVLIIITA 60

Query: 61  VLAIRYHKNKGNAQEFLRPYLSFALVLITVGLLKLAYHTPRPITYGSGIGAFAFPSGHTA 120
           VLAIRYHKNKGNAQEFLRPYLSFALVLITVGLLKLAYHTPRPITYGSGIGAFAFPSGHTA
Sbjct: 61  VLAIRYHKNKGNAQEFLRPYLSFALVLITVGLLKLAYHTPRPITYGSGIGAFAFPSGHTA 120

Query: 121 KASMLANYLSDVFPKYKAIIWTFPVVIGATRLLLHVHWFSDVLFGLFYGAFIDEVVKVVM 180
           KASMLANYLSDVFPKYKAIIWTFPVVIGATRLLLHVHWFSDVLFGLFYGAFIDEVVKVVM
Sbjct: 121 KASMLANYLSDVFPKYKAIIWTFPVVIGATRLLLHVHWFSDVLFGLFYGAFIDEVVKVVM 180

Query: 181 KSELP 185
           KSELP
Sbjct: 181 KSELP 185


>pir||A71046 hypothetical protein PH1657 - Pyrococcus horikoshii
           >gi|3258086|dbj|BAA30769.1| (AP000006) 184aa long
           hypothetical protein [Pyrococcus horikoshii]
           Length = 184
           
 Score =  213 bits (538), Expect = 8e-55
 Identities = 106/178 (59%), Positives = 131/178 (73%)

Query: 4   KLITLGSLSFAIALLQALGFFNGINEAINSLLPQGGDVVKAVTTLADTHVVLIIITAVLA 63
           KLI LG LS  I LL+AL  FN IN  IN+ LP GG++  A T LADT  +L I+T V+ 
Sbjct: 3   KLILLGILSLIIGLLEALEAFNSINNVINAELPYGGNLTSATTKLADTSSILGILTLVVI 62

Query: 64  IRYHKNKGNAQEFLRPYLSFALVLITVGLLKLAYHTPRPITYGSGIGAFAFPSGHTAKAS 123
           +   + K   ++ +RPY+S  LVL TVG+LK+ YH PRPI+YG GI + AFPSGHTAKAS
Sbjct: 63  VETLRGKIKPKDAIRPYVSIFLVLATVGILKIIYHVPRPISYGKGIESLAFPSGHTAKAS 122

Query: 124 MLANYLSDVFPKYKAIIWTFPVVIGATRLLLHVHWFSDVLFGLFYGAFIDEVVKVVMK 181
            LANYL D++P+ + +I+ FPV IG TR+LLHVHWFSDVLF LFYGAFIDE VKVV +
Sbjct: 123 ALANYLGDLWPRARFLIYLFPVTIGITRILLHVHWFSDVLFSLFYGAFIDESVKVVWR 180


  Database: ./suso.pep
    Posted date:  Jul 6, 2001  5:57 PM
  Number of letters in database: 840,471
  Number of sequences in database:  2977
  
  Database: /banques/blast2/nr.pep
    Posted date:  Dec 14, 2000 12:46 PM
  Number of letters in database: 188,266,275
  Number of sequences in database:  595,510
  
Lambda     K      H
   0.327    0.143    0.429 

Gapped
Lambda     K      H
   0.270   0.0470    0.230 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 65230258
Number of Sequences: 2977
Number of extensions: 2509659
Number of successful extensions: 7227
Number of sequences better than 1.0e-10: 2
Number of HSP's better than  0.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 7225
Number of HSP's gapped (non-prelim): 2
length of query: 185
length of database: 189,106,746
effective HSP length: 50
effective length of query: 135
effective length of database: 159,182,396
effective search space: 21489623460
effective search space used: 21489623460
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 40 (21.7 bits)
S2: 163 (67.9 bits)