BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB2040 (aif2G) DE:translation initiation factor aIF-2, subunit
gamma (aif2G)
(411 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||F75163 translation initiation factor aif-2, chain gamma (ai... 833 0.0
sp|O59410|IF2G_PYRHO PROBABLE TRANSLATION INITIATION FACTOR 2 GA... 824 0.0
sp|Q58657|IF2G_METJA PROBABLE TRANSLATION INITIATION FACTOR 2 GA... 588 e-167
sp|O26361|IF2G_METTH PROBABLE TRANSLATION INITIATION FACTOR 2 GA... 545 e-154
gi|11498200 translation initiation factor eIF-2, subunit gamma (... 534 e-151
sp|Q9Y9C1|IF2G_AERPE PROBABLE TRANSLATION INITIATION FACTOR 2 GA... 513 e-144
gb|AAG20211.1| (AE005097) translation initiation factor eIF-2 su... 488 e-137
gb|AAK40740.1| Translation initiation factor eiF 2 gamma (eif2G)... 473 e-132
emb|CAC11467.1| (AL445063) probable translation initiation facto... 472 e-132
sp|O93626|IF2G_HALHA PROBABLE TRANSLATION INITIATION FACTOR 2 GA... 469 e-131
gb|AAD08941.1| (AC005724) putative translation initiation factor... 391 e-107
sp|Q24208|IF2G_DROME EUKARYOTIC TRANSLATION INITIATION FACTOR 2 ... 383 e-105
sp|Q09130|IF2G_SCHPO EUKARYOTIC TRANSLATION INITIATION FACTOR 2 ... 377 e-104
emb|CAB98197.1| (AJ290961) eukaryotic translation initiation fac... 373 e-102
gi|4503507 eukaryotic translation initiation factor 2, subunit 3... 373 e-102
gi|6753738 eukaryotic translation initiation factor 2, subunit 3... 373 e-102
gi|6320863 gamma subunit of translational initiation factor eIF-... 371 e-102
gi|7242148 eukaryotic translation initiation factor 2, subunit 3... 369 e-101
emb|CAB94834.1| (AJ290964) eukaryotic translation initiation fac... 368 e-101
gi|11436023 similar to eukaryotic translation initiation factor ... 365 e-100
pir||T00956 translation initiation factor eIF-2 gamma chain F20D... 365 e-100
sp|O96719|IF2G_ENCCU EUKARYOTIC TRANSLATION INITIATION FACTOR 2 ... 363 2e-99
pir||T04935 translation initiation factor eIF-2 gamma chain T9A2... 354 1e-96
emb|CAB98196.1| (AJ290961) heterochromatin protein [Clytus arietis] 320 2e-86
emb|CAB94835.1| (AJ290965) heterochromatin protein [Leptinotarsa... 313 2e-84
emb|CAA09448.1| (AJ010980) translation initiation factor 2 gamma... 300 2e-80
emb|CAA07331.1| (AJ006932) retropseudogene [Homo sapiens] 217 2e-55
gb|AAD04235.1| (AF005077) translation initiation factor 2 gamma ... 207 2e-52
gb|AAD04233.1| (AF005075) translation initiation factor 2 gamma ... 192 8e-48
gb|AAD04234.1| (AF005076) translation initiation factor 2 gamma ... 187 2e-46
gb|AAD04236.1| (AF005078) translation initiation factor 2 gamma ... 181 2e-44
sp|O36041|IF2G_SPIVO EUKARYOTIC TRANSLATION INITIATION FACTOR 2 ... 179 4e-44
sp|Q46455|SELB_MOOTH SELENOCYSTEINE-SPECIFIC ELONGATION FACTOR (... 152 7e-36
sp|P42471|EFTU_BRELN ELONGATION FACTOR TU (EF-TU) >gi|2147347|pi... 146 5e-34
sp|O50293|EFTU_AQUPY ELONGATION FACTOR TU (EF-TU) >gi|2687828|em... 146 5e-34
sp|O66429|EFTU_AQUAE ELONGATION FACTOR TU (EF-TU) >gi|7443392|pi... 145 7e-34
sp|P40174|EFT1_STRCO ELONGATION FACTOR TU-1 (EF-TU-1) >gi|107606... 144 2e-33
prf||2021268A elongation factor [Streptomyces coelicolor] 144 2e-33
sp|O33594|EFTU_STRAU ELONGATION FACTOR TU (EF-TU) >gi|2246664|gb... 142 6e-33
pir||G70465 translation elongation factor EF-Tu - Aquifex aeolic... 142 6e-33
sp|P33170|EFTU_STROR ELONGATION FACTOR TU (EF-TU) >gi|320486|pir... 142 8e-33
sp|P42439|EFTU_CORGL ELONGATION FACTOR TU (EF-TU) >gi|560819|emb... 142 8e-33
sp|P29542|EFT1_STRRA ELONGATION FACTOR TU-1 (EF-TU-1) >gi|280337... 141 1e-32
gb|AAF22608.1|AF153618_2 (AF153618) elongation factor Tu1 [Strep... 141 1e-32
gb|AAF22606.1|AF153617_2 (AF153617) elongation factor Tu1 [Strep... 141 1e-32
sp|P33166|EFTU_BACSU ELONGATION FACTOR TU (EF-TU) (P-40) >gi|320... 141 2e-32
pir||PC4060 translation elongation factor EF-Tu1 - Streptomyces ... 139 4e-32
sp|Q53871|EFT1_STRCU ELONGATION FACTOR TU-1 (EF-TU-1) 139 4e-32
pir||A48314 translation elongation factor Tu - Thermotoga mariti... 139 5e-32
sp|P13537|EFTU_THEMA ELONGATION FACTOR TU (EF-TU) >gi|7443394|pi... 139 5e-32
sp|P26184|EFTU_FLESI ELONGATION FACTOR TU (EF-TU) >gi|625342|pir... 139 7e-32
sp|O50306|EFTU_BACST ELONGATION FACTOR TU (EF-TU) >gi|2661392|em... 139 7e-32
sp|P42477|EFTU_HERAU ELONGATION FACTOR TU (EF-TU) >gi|560835|emb... 138 9e-32
sp|P31501|EFTU_MYCTU ELONGATION FACTOR TU (EF-TU) >gi|282523|pir... 138 1e-31
emb|CAA45101.1| (X63539) orf [Mycobacterium tuberculosis] 138 1e-31
sp|P95724|EFTU_STRCJ ELONGATION FACTOR TU (EF-TU) >gi|1707675|em... 137 2e-31
sp|P42476|EFTU_FLAFE ELONGATION FACTOR TU (EF-TU) >gi|560831|emb... 137 3e-31
dbj|BAA88138.1| (AB035465) EF-Tu [Porphyromonas gingivalis] 137 3e-31
sp|Q9Z9L6|EFTU_BACHD ELONGATION FACTOR TU (EF-TU) >gi|11277705|p... 137 3e-31
gi|6324761 Translation elongation factor Tu, mitochondrial; Tuf1... 136 4e-31
sp|P42473|EFTU_CHLVI ELONGATION FACTOR TU (EF-TU) >gi|560825|emb... 136 5e-31
dbj|BAA88136.1| (AB035463) EF-Tu [Porphyromonas gingivalis] 136 6e-31
emb|CAB53235.1| (AJ245960) elongation factor SelB [Eubacterium a... 136 6e-31
dbj|BAA88135.1| (AB035462) EF-Tu [Porphyromonas gingivalis] >gi|... 135 8e-31
sp|Q46497|SELB_DESBA SELENOCYSTEINE-SPECIFIC ELONGATION FACTOR (... 135 8e-31
pir||D81234 translation elongation factor Tu NMB0139 [imported] ... 135 1e-30
sp|O69303|EFTU_CAMJE ELONGATION FACTOR TU (EF-TU) >gi|11277712|p... 135 1e-30
dbj|BAA88134.1| (AB035461) EF-Tu [Porphyromonas gingivalis] 135 1e-30
pir||A81235 translation elongation factor Tu NMB0124 [imported] ... 134 1e-30
pir||S17146 translation elongation factor EF-Tu.B [validated] - ... 134 2e-30
sp|P30768|EFTU_MYCLE ELONGATION FACTOR TU (EF-TU) >gi|479624|pir... 134 2e-30
pir||JC2262 translation elongation factor Tu - Mycobacterium leprae 134 2e-30
pdb|1AIP|E Chain E, Ef-Tu Ef-Ts Complex From Thermus Thermophilu... 134 2e-30
dbj|BAA02982.2| (D13869) elongation factor Tu [Mycobacterium lep... 134 2e-30
pdb|1EXM|A Chain A, Crystal Structure Of Thermus Thermophilus El... 134 2e-30
sp|P07157|EFTU_THETH ELONGATION FACTOR TU (EF-TU) >gi|77584|pir|... 134 2e-30
emb|CAA29397.1| (X05977) elongation factor Tu (AA 1 - 406) [Ther... 134 2e-30
sp|Q01698|EFTU_THEAQ ELONGATION FACTOR TU (EF-TU) >gi|478775|pir... 133 4e-30
pdb|1EFT| Elongation Factor Tu (Ef-Tu) Complexed With Guanosin... 133 4e-30
pdb|1B23|P Chain P, E. Coli Cysteinyl-Trna And T. Aquaticus Elon... 133 4e-30
sp|P74227|EFTU_SYNY3 ELONGATION FACTOR TU (EF-TU) >gi|7443388|pi... 132 5e-30
sp|P72231|EFTU_PLARO ELONGATION FACTOR TU (EF-TU) >gi|1679859|em... 132 5e-30
dbj|BAA88139.1| (AB035466) EF-Tu [Bacteroides forsythus] 132 5e-30
dbj|BAB13219.1| (AP001119) elongation factor EF-Tu [Buchnera sp.... 132 7e-30
sp|O31297|EFTU_BUCAI ELONGATION FACTOR TU (EF-TU) 132 7e-30
sp|P09953|EFTU_MICLU ELONGATION FACTOR TU (EF-TU) >gi|79832|pir|... 132 9e-30
sp|P33165|EFTU_BACFR ELONGATION FACTOR TU (EF-TU) >gi|320453|pir... 131 1e-29
sp|P13927|EFTU_MYCGE ELONGATION FACTOR TU (EF-TU) >gi|72862|pir|... 131 2e-29
pir||S57466 probable translation elongation factor EF-Tu - Toxop... 131 2e-29
pir||JC5385 translation elongation factor EF-Tu.1 - Planobispora... 131 2e-29
gi|11496548 elongation factor-Tu [Toxoplasma gondii] >gi|5231251... 131 2e-29
gi|11467799 translational elongation factor Tu [Nephroselmis oli... 131 2e-29
sp|P42479|EFTU_STIAU ELONGATION FACTOR TU (EF-TU) >gi|1084018|pi... 131 2e-29
pir||T01400 translation elongation factor EF-Tu precursor, mitoc... 131 2e-29
sp|P29543|EFT2_STRRA ELONGATION FACTOR TU-2 (EF-TU-2) >gi|280338... 130 3e-29
sp|P33169|EFTU_SHEPU ELONGATION FACTOR TU (EF-TU) >gi|320375|pir... 130 3e-29
sp|P56003|EFTU_HELPY ELONGATION FACTOR TU (EF-TU) >gi|7443389|pi... 130 3e-29
sp|P48865|EFTU_RICPR ELONGATION FACTOR TU (EF-TU) >gi|7443383|pi... 130 3e-29
gb|AAD32649.1|AF136604_1 (AF136604) EF-Tu [Coxiella burnetii] 130 3e-29
gb|AAG32661.1| (AF264877) translational elongation factor EF-TuM... 130 3e-29
sp|P48864|EFTU_NEIGO ELONGATION FACTOR TU (EF-TU) >gi|11277703|p... 129 8e-29
gi|11467443 elongation factor Tu [Odontella sinensis] >gi|135235... 128 1e-28
sp|P18906|EFTU_MYCGA ELONGATION FACTOR TU (EF-TU) >gi|72863|pir|... 128 1e-28
pir||S57945 probable translation elongation factor EF-Tu - Eimer... 128 1e-28
sp|P42474|EFTU_CYTLY ELONGATION FACTOR TU (EF-TU) >gi|2147348|pi... 127 2e-28
sp|P18668|EFTU_SYNP6 ELONGATION FACTOR TU (EF-TU) >gi|79628|pir|... 127 2e-28
sp|P50068|EFTU_UREPA ELONGATION FACTOR TU (EF-TU) >gi|2127672|pi... 127 2e-28
sp|P43926|EFTU_HAEIN ELONGATION FACTOR TU (EF-TU) >gi|1074052|pi... 127 2e-28
sp|P21694|EFTU_SALTY ELONGATION FACTOR TU (EF-TU) >gi|96717|pir|... 127 3e-28
pir||S13560 translation elongation factor EF-Tu.A - Salmonella t... 127 3e-28
sp|P33171|EFTU_SYNP7 ELONGATION FACTOR TU (EF-TU) 127 3e-28
sp|P42480|EFTU_TAXOC ELONGATION FACTOR TU (EF-TU) >gi|587581|emb... 127 3e-28
emb|CAA90881.1| (Z54170) elongation factor EF-Tu [Rickettsia pro... 127 3e-28
pir||S62701 translation elongation factor Tu precursor - Arabido... 127 3e-28
sp|P23568|EFTU_MYCPN ELONGATION FACTOR TU (EF-TU) >gi|2146121|pi... 127 3e-28
gi|11465449 unknown; elongation factor Tu [Cyanidium caldarium] ... 127 3e-28
pir||A82532 translation elongation factor EF-Tu XF2640 XF2628 [i... 127 3e-28
sp|P02990|EFTU_ECOLI ELONGATION FACTOR TU (EF-TU) (P-43) >gi|728... 126 4e-28
pir||EFECTA translation elongation factor EF-Tu.A [validated] - ... 126 4e-28
sp|P42482|EFTU_WOLSU ELONGATION FACTOR TU (EF-TU) >gi|587590|emb... 126 4e-28
sp|P46280|EFT2_SOYBN ELONGATION FACTOR TU, CHLOROPLAST PRECURSOR... 126 4e-28
pdb|1EFC|A Chain A, Intact Elongation Factor From E.Coli >gi|469... 126 4e-28
pir||C75110 translation elongation factor ef-1, chain alpha (tuf... 126 4e-28
pdb|1D8T|A Chain A, Crystal Structure Of Elongation Factor, Tu (... 126 4e-28
pir||I53499 P43 - human >gi|7443384|pir||S68466 translation elon... 126 5e-28
gi|11465753 elongation factor Tu [Porphyra purpurea] >gi|1706616... 126 5e-28
emb|CAA54197.1| (X76870) elongation factor Tu [Stigmatella auran... 125 7e-28
sp|Q9ZK19|EFTU_HELPJ ELONGATION FACTOR TU (EF-TU) >gi|7443412|pi... 125 7e-28
prf||1607332B elongation factor Tu [Chlamydomonas reinhardtii] 125 7e-28
gi|4507733 Tu translation elongation factor, mitochondrial [Homo... 125 7e-28
sp|P49411|EFTU_HUMAN ELONGATION FACTOR TU, MITOCHONDRIAL PRECURS... 125 7e-28
gi|11466416 translational elongation factor Tu [Mesostigma virid... 125 9e-28
pir||D82332 translation elongation factor EF-Tu VC0362 [imported... 125 9e-28
sp|P50373|EFTU_CYCME ELONGATION FACTOR TU (EF-TU) >gi|836836|gb|... 125 1e-27
sp|P17746|EFTU_CHLRE ELONGATION FACTOR TU (EF-TU) >gi|81261|pir|... 124 2e-27
sp|P14634|EFTU_ASTLO ELONGATION FACTOR TU (EF-TU) >gi|72866|pir|... 124 2e-27
gi|11467744 elongation factor EF-Tu [Guillardia theta] >gi|11919... 124 2e-27
sp|P33167|EFTU_BURCE ELONGATION FACTOR TU (EF-TU) >gi|320390|pir... 123 3e-27
gi|11466508 elongation factor [Reclinomonas americana] >gi|60150... 123 3e-27
sp|P13552|EFTU_SPIPL ELONGATION FACTOR TU (EF-TU) >gi|79739|pir|... 123 3e-27
sp|O50340|EFTU_FERIS ELONGATION FACTOR TU (EF-TU) >gi|2687830|em... 123 4e-27
sp|O59153|EF1A_PYRHO ELONGATION FACTOR 1-ALPHA (EF-1-ALPHA) (ELO... 123 4e-27
pir||C83112 elongation factor Tu PA4265 [imported] - Pseudomonas... 123 4e-27
sp|P26751|EF1A_PYRWO ELONGATION FACTOR 1-ALPHA (EF-1-ALPHA) (ELO... 122 6e-27
gi|7524809 protein synthesis elongation factor Tu [Chlorella vul... 122 6e-27
pir||F81685 translation elongation factor Tu TC0596 [imported] -... 122 6e-27
sp|P42481|EFTU_THICU ELONGATION FACTOR TU (EF-TU) >gi|587579|emb... 122 8e-27
sp|P41342|EFTU_TOBAC ELONGATION FACTOR TU, CHLOROPLAST PRECURSOR... 122 8e-27
pdb|1EFM| Trypsin-Modified Elongation Factor Tu (EF-Tu-GDP) 122 1e-26
gi|11466993 elongation factor Ef-Tu [Euglena gracilis] >gi|11920... 122 1e-26
gb|AAD40614.1| (AF115283) elongation factor Tu [Leptospira inter... 122 1e-26
pir||G82337 translation elongation factor EF-Tu VC0321 [imported... 122 1e-26
sp|P17745|EFTU_ARATH ELONGATION FACTOR TU, CHLOROPLAST PRECURSOR... 121 1e-26
emb|CAB53113.1| (AJ245645) protein synthesis elongation factor T... 121 1e-26
gb|AAG09263.1| (AF176664) Eftu [EDTA-degrading bacterium BNC1] 121 1e-26
pir||A49894 translation elongation factor Tu - Chlamydia trachom... 121 2e-26
pir||S36184 translation elongation factor EF-Tu.B precursor, chl... 121 2e-26
sp|P26622|EFTU_CHLTR ELONGATION FACTOR TU (EF-TU) >gi|7443382|pi... 121 2e-26
gb|AAB87734.1| (U78300) elongation factor Tu [Thiomonas cuprina] 120 2e-26
sp|P75022|EFTU_AGRTU ELONGATION FACTOR TU (EF-TU) >gi|1666548|em... 120 3e-26
dbj|BAA01975.1| (D11376) chloroplast elongation factor TuB (EF-T... 120 3e-26
dbj|BAA02028.1| (D11470) chloroplast elongation factor TuB(EF-Tu... 120 3e-26
sp|Q43467|EFT1_SOYBN ELONGATION FACTOR TU, CHLOROPLAST PRECURSOR... 120 4e-26
sp|O24310|EFTU_PEA ELONGATION FACTOR TU, CHLOROPLAST PRECURSOR (... 120 4e-26
gb|AAG35793.1|AF295387_1 (AF295387) translational elongation fac... 120 4e-26
sp|P42472|EFTU_CHLAU ELONGATION FACTOR TU (EF-TU) >gi|2119919|pi... 119 5e-26
emb|CAA36740.1| (X52497) tufA gene product (AA 1-409) [Cyanophor... 119 7e-26
gi|11467350 protein synthesis elongation factor Tu [Cyanophora p... 119 7e-26
sp|Q9Z9A7|EFTU_CHLPN ELONGATION FACTOR TU (EF-TU) >gi|7443413|pi... 119 7e-26
sp|P17197|EF1A_THECE ELONGATION FACTOR 1-ALPHA (EF-1-ALPHA) (ELO... 118 9e-26
emb|CAB95778.1| (AL359949) elongation factor TU-3 [Streptomyces ... 118 1e-25
pir||B70389 translation elongation factor EF-selB - Aquifex aeol... 118 2e-25
sp|P40175|EFT3_STRCO ELONGATION FACTOR TU-3 (EF-TU-3) >gi|107607... 117 2e-25
dbj|BAA01974.1| (D11375) chloroplast elongation factor TuA (EF-T... 116 3e-25
sp|P50372|EFTU_CODFR ELONGATION FACTOR TU (EF-TU) >gi|836830|gb|... 116 6e-25
gb|AAA62238.1| (M74221) elongation factor Tu [Chlamydia trachoma... 115 1e-24
dbj|BAA07492.1| (D38472) elongation factor Tu homologue precurso... 113 5e-24
dbj|BAA07491.1| (D38471) elongation factor Tu homologue precurso... 113 5e-24
sp|O63930|EFTU_GYMST CHLOROPLAST EF-TU >gi|3097302|dbj|BAA25891.... 113 5e-24
gb|AAC94985.1| (AF037999) elongation factor Tu [Eustigmatos magnus] 113 5e-24
sp|P14081|SELB_ECOLI SELENOCYSTEINE-SPECIFIC ELONGATION FACTOR (... 111 1e-23
gb|AAB18567.1| (U00039) CG Site No. 17890 [Escherichia coli] 111 1e-23
pir||JC1420 translation elongation factor EF-Tu - Chlamydia trac... 111 1e-23
gb|AAC94986.1| (AF038000) elongation factor Tu [Ophiocytium majus] 110 3e-23
gb|AAC94983.1| (AF037997) elongation factor Tu [Nannochloropsis ... 109 4e-23
pir||E71354 probable translation elongation factor EF-Tu (tuf) -... 109 7e-23
sp|O83217|EFTU_TREPA ELONGATION FACTOR TU (EF-TU) 109 7e-23
gb|AAC94984.1| (AF037998) elongation factor Tu [Monodus sp. CCMP... 108 2e-22
pir||S11997 translation elongation factor Tu - Mycoplasma pneumo... 106 4e-22
sp|Q9ZEU3|EFTU_APPPP ELONGATION FACTOR TU (EF-TU) >gi|4127382|em... 106 4e-22
gb|AAC94989.1| (AF038003) elongation factor Tu [Undaria pinnatif... 99 1e-19
dbj|BAA25893.1| (AB008010) chloroplast EF-Tu [Pyramimonas disomata] 97 4e-19
emb|CAA75382.1| (Y15108) translation elongation factor-TU [Glyci... 92 1e-17
gi|11498350 GTP-binding protein [Archaeoglobus fulgidus] >gi|748... 80 6e-14
pir||A69025 translation elongation factor, EF-1 alpha related pr... 71 2e-11
>pir||F75163 translation initiation factor aif-2, chain gamma (aif2g) PAB2040 -
Pyrococcus abyssi (strain Orsay)
>gi|5457899|emb|CAB49389.1| (AJ248284) translation
initiation factor aIF-2, subunit gamma (aif2G)
[Pyrococcus abyssi]
Length = 411
Score = 833 bits (2128), Expect = 0.0
Identities = 411/411 (100%), Positives = 411/411 (100%)
Query: 1 MGEKRKSRQAEVNIGMVGHVDHGKTTLTKALTGVWTDTHSEELRRGITIKIGFADAEIRR 60
MGEKRKSRQAEVNIGMVGHVDHGKTTLTKALTGVWTDTHSEELRRGITIKIGFADAEIRR
Sbjct: 1 MGEKRKSRQAEVNIGMVGHVDHGKTTLTKALTGVWTDTHSEELRRGITIKIGFADAEIRR 60
Query: 61 CPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMDGAILVIAANEP 120
CPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMDGAILVIAANEP
Sbjct: 61 CPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMDGAILVIAANEP 120
Query: 121 CPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALENYRQIKEFIEGTVAENAPIIPI 180
CPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALENYRQIKEFIEGTVAENAPIIPI
Sbjct: 121 CPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALENYRQIKEFIEGTVAENAPIIPI 180
Query: 181 SALHGANIDVLVKAIEDFIPTPKRDPNKPPKMLVLRSFDVNKPGTPPEKLVGGVLGGSIV 240
SALHGANIDVLVKAIEDFIPTPKRDPNKPPKMLVLRSFDVNKPGTPPEKLVGGVLGGSIV
Sbjct: 181 SALHGANIDVLVKAIEDFIPTPKRDPNKPPKMLVLRSFDVNKPGTPPEKLVGGVLGGSIV 240
Query: 241 QGKLKVGDEIEIRPGVPYEEHGRIKYEPITTEIVSLQAGGQFVEEAYPGGLVGVGTKLDP 300
QGKLKVGDEIEIRPGVPYEEHGRIKYEPITTEIVSLQAGGQFVEEAYPGGLVGVGTKLDP
Sbjct: 241 QGKLKVGDEIEIRPGVPYEEHGRIKYEPITTEIVSLQAGGQFVEEAYPGGLVGVGTKLDP 300
Query: 301 YLTKGDLMAGNVVGKPGKLPPVWDSLRLEVHLLERVVGTEQELKVEPIKRKEVLLLNVGT 360
YLTKGDLMAGNVVGKPGKLPPVWDSLRLEVHLLERVVGTEQELKVEPIKRKEVLLLNVGT
Sbjct: 301 YLTKGDLMAGNVVGKPGKLPPVWDSLRLEVHLLERVVGTEQELKVEPIKRKEVLLLNVGT 360
Query: 361 ARTMGLVTGLGKDEIEVKLQIPVCAEPGDRVAISRQIGSRWRLIGYGIIKE 411
ARTMGLVTGLGKDEIEVKLQIPVCAEPGDRVAISRQIGSRWRLIGYGIIKE
Sbjct: 361 ARTMGLVTGLGKDEIEVKLQIPVCAEPGDRVAISRQIGSRWRLIGYGIIKE 411
>sp|O59410|IF2G_PYRHO PROBABLE TRANSLATION INITIATION FACTOR 2 GAMMA SUBUNIT
(EIF-2-GAMMA) >gi|7428969|pir||E71178 translation
initiation factor aIF-2 gamma chain - Pyrococcus
horikoshii >gi|3258137|dbj|BAA30820.1| (AP000007) 411aa
long hypothetical translation initiation factor eIF-2
gamma [Pyrococcus horikoshii]
Length = 411
Score = 824 bits (2105), Expect = 0.0
Identities = 404/411 (98%), Positives = 410/411 (99%)
Query: 1 MGEKRKSRQAEVNIGMVGHVDHGKTTLTKALTGVWTDTHSEELRRGITIKIGFADAEIRR 60
MGE+RK+RQAEVNIGMVGHVDHGKTTLTKALTGVWTDTHSEELRRGITIKIGFADAEIRR
Sbjct: 1 MGERRKTRQAEVNIGMVGHVDHGKTTLTKALTGVWTDTHSEELRRGITIKIGFADAEIRR 60
Query: 61 CPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMDGAILVIAANEP 120
CPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMDGAILVIAANEP
Sbjct: 61 CPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMDGAILVIAANEP 120
Query: 121 CPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALENYRQIKEFIEGTVAENAPIIPI 180
CPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALENYRQIKEFI+GTVAENAPIIPI
Sbjct: 121 CPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALENYRQIKEFIKGTVAENAPIIPI 180
Query: 181 SALHGANIDVLVKAIEDFIPTPKRDPNKPPKMLVLRSFDVNKPGTPPEKLVGGVLGGSIV 240
SALHGANIDVLVKAIEDFIPTPKRDPNKPPKMLVLRSFDVNKPGTPPEKLVGGVLGGSIV
Sbjct: 181 SALHGANIDVLVKAIEDFIPTPKRDPNKPPKMLVLRSFDVNKPGTPPEKLVGGVLGGSIV 240
Query: 241 QGKLKVGDEIEIRPGVPYEEHGRIKYEPITTEIVSLQAGGQFVEEAYPGGLVGVGTKLDP 300
QGKLKVGDEIEIRPG+PYEEHGRI+YEPITTEIVSLQAGGQFVEEAYPGGLVGVGTKLDP
Sbjct: 241 QGKLKVGDEIEIRPGIPYEEHGRIRYEPITTEIVSLQAGGQFVEEAYPGGLVGVGTKLDP 300
Query: 301 YLTKGDLMAGNVVGKPGKLPPVWDSLRLEVHLLERVVGTEQELKVEPIKRKEVLLLNVGT 360
YLTKGDLMAGNVVGKPGKLPPVWDSLRLEVHLLERVVGTEQEL+VEPIKRKEVLLLNVGT
Sbjct: 301 YLTKGDLMAGNVVGKPGKLPPVWDSLRLEVHLLERVVGTEQELRVEPIKRKEVLLLNVGT 360
Query: 361 ARTMGLVTGLGKDEIEVKLQIPVCAEPGDRVAISRQIGSRWRLIGYGIIKE 411
ARTMGLVT LGKDEIEVKLQIPVCAEPGDRVAISRQIGSRWRLIGYGIIKE
Sbjct: 361 ARTMGLVTNLGKDEIEVKLQIPVCAEPGDRVAISRQIGSRWRLIGYGIIKE 411
>sp|Q58657|IF2G_METJA PROBABLE TRANSLATION INITIATION FACTOR 2 GAMMA SUBUNIT
(EIF-2-GAMMA) >gi|2129324|pir||D64457 translation
initiation factor aIF-2 gamma chain - Methanococcus
jannaschii >gi|1591895|gb|AAB99264.1| (U67566)
translation initiation factor aIF-2, subunit gamma
(aif2G) [Methanococcus jannaschii]
Length = 437
Score = 588 bits (1500), Expect = e-167
Identities = 275/410 (67%), Positives = 345/410 (84%)
Query: 1 MGEKRKSRQAEVNIGMVGHVDHGKTTLTKALTGVWTDTHSEELRRGITIKIGFADAEIRR 60
M +K++++QAEVNIGMVGHVDHGKT+LTKALTGVWTD HSEELRRGI+I++G+AD EIR+
Sbjct: 27 MAKKKQAKQAEVNIGMVGHVDHGKTSLTKALTGVWTDRHSEELRRGISIRLGYADCEIRK 86
Query: 61 CPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMDGAILVIAANEP 120
CP CG Y+T P CP C ETEF+RRVSF+D+PGHE LM TML+GASLMDGAILVIAANEP
Sbjct: 87 CPQCGTYTTKPRCPNCLAETEFLRRVSFVDSPGHETLMATMLSGASLMDGAILVIAANEP 146
Query: 121 CPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALENYRQIKEFIEGTVAENAPIIPI 180
CP+PQT+EHLMAL+I+G III QNKI+LVD+++A ENY QIKEF++GT+AENAPIIPI
Sbjct: 147 CPQPQTKEHLMALEILGIDKIIIVQNKIDLVDEKQAEENYEQIKEFVKGTIAENAPIIPI 206
Query: 181 SALHGANIDVLVKAIEDFIPTPKRDPNKPPKMLVLRSFDVNKPGTPPEKLVGGVLGGSIV 240
SA H ANIDVL+KAI+DFIPTPKRDP+ P+M V RSFD+NKPGT + L GGVLGG+I+
Sbjct: 207 SAHHEANIDVLLKAIQDFIPTPKRDPDATPRMYVARSFDINKPGTEIKDLKGGVLGGAII 266
Query: 241 QGKLKVGDEIEIRPGVPYEEHGRIKYEPITTEIVSLQAGGQFVEEAYPGGLVGVGTKLDP 300
QG KVGDEIEIRPG+ E + ++P+TT+IVSL AG + +A+PGGL+GVGT LDP
Sbjct: 267 QGVFKVGDEIEIRPGIKVTEGNKTFWKPLTTKIVSLAAGNTILRKAHPGGLIGVGTTLDP 326
Query: 301 YLTKGDLMAGNVVGKPGKLPPVWDSLRLEVHLLERVVGTEQELKVEPIKRKEVLLLNVGT 360
YLTK D + G+VVG PG LPP+ + + + +LL+RVVGT++ELK+EP++ EVL+LN+GT
Sbjct: 327 YLTKSDALTGSVVGLPGTLPPIREKITIRANLLDRVVGTKEELKIEPLRTGEVLMLNIGT 386
Query: 361 ARTMGLVTGLGKDEIEVKLQIPVCAEPGDRVAISRQIGSRWRLIGYGIIK 410
A T G++T D ++KL++P+CAE GDRVAISR++GSRWRLIGYG I+
Sbjct: 387 ATTAGVITSARGDIADIKLKLPICAEIGDRVAISRRVGSRWRLIGYGTIE 436
>sp|O26361|IF2G_METTH PROBABLE TRANSLATION INITIATION FACTOR 2 GAMMA SUBUNIT
(EIF-2-GAMMA) >gi|7428970|pir||H69132 translation
initiation factor aIF-2 gamma chain - Methanobacterium
thermoautotrophicum (strain Delta H)
>gi|2621311|gb|AAB84767.1| (AE000812) translation
initiation factor eIF-2, gamma subunit
[Methanobacterium thermoautotrophicum]
Length = 408
Score = 545 bits (1388), Expect = e-154
Identities = 255/405 (62%), Positives = 328/405 (80%), Gaps = 3/405 (0%)
Query: 9 QAEVNIGMVGHVDHGKTTLTKALTGVWTDTHSEELRRGITIKIGFADAEIRRCPNCGR-- 66
Q+E+NIG+VGHVDHGKTTLTKAL+GVWTDTHSEE +RGI+I++G+AD R+CP C
Sbjct: 4 QSEINIGLVGHVDHGKTTLTKALSGVWTDTHSEETKRGISIRLGYADITFRKCPQCEAPM 63
Query: 67 -YSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMDGAILVIAANEPCPRPQ 125
Y+T+ +C CG ETE +R+VSF+DAPGHE LM TML+GA+LMDGAILVIAANEPCP+PQ
Sbjct: 64 CYTTAEICERCGTETELLRKVSFVDAPGHETLMATMLSGAALMDGAILVIAANEPCPQPQ 123
Query: 126 TREHLMALQIIGQKNIIIAQNKIELVDKEKALENYRQIKEFIEGTVAENAPIIPISALHG 185
T+EHLMAL +IG K++I+ QNKI++V KE+ALE+YR+IKEF++GT AE+APIIP+SA G
Sbjct: 124 TKEHLMALDVIGVKDVIVVQNKIDIVSKERALESYREIKEFVKGTCAEDAPIIPVSAQQG 183
Query: 186 ANIDVLVKAIEDFIPTPKRDPNKPPKMLVLRSFDVNKPGTPPEKLVGGVLGGSIVQGKLK 245
ANID+L++ IE+ I TPKRD +KP +M V RSFD+NKPG PE L GGV+GGS+VQG+L+
Sbjct: 184 ANIDILIETIEERIKTPKRDVDKPARMYVARSFDINKPGADPEHLAGGVIGGSLVQGRLR 243
Query: 246 VGDEIEIRPGVPYEEHGRIKYEPITTEIVSLQAGGQFVEEAYPGGLVGVGTKLDPYLTKG 305
VGDEIEIRPG+ ++ G+ + + + I L AGG+ +EE PGGLVGVGT LDP LTK
Sbjct: 244 VGDEIEIRPGIQVKKDGKQTWMSLHSTITGLVAGGEEMEEVGPGGLVGVGTLLDPALTKA 303
Query: 306 DLMAGNVVGKPGKLPPVWDSLRLEVHLLERVVGTEQELKVEPIKRKEVLLLNVGTARTMG 365
D ++G+V G+PG LPPV S +E HLLERVVGT++E KVEPIK E L++NVGT T+G
Sbjct: 304 DSLSGSVAGEPGTLPPVRHSFTMETHLLERVVGTKEETKVEPIKTGEPLMINVGTTTTVG 363
Query: 366 LVTGLGKDEIEVKLQIPVCAEPGDRVAISRQIGSRWRLIGYGIIK 410
+V D+ +V L++P CAE G R+A+SR++G+RWRLIGYGIIK
Sbjct: 364 VVKSARADDADVVLKLPACAEEGQRIALSRRVGARWRLIGYGIIK 408
>gi|11498200 translation initiation factor eIF-2, subunit gamma (eif2G)
[Archaeoglobus fulgidus]
>gi|3122252|sp|O29663|IF2G_ARCFU PROBABLE TRANSLATION
INITIATION FACTOR 2 GAMMA SUBUNIT (EIF-2-GAMMA)
>gi|7428971|pir||H69323 translation initiation factor
aIF-2 gamma chain - Archaeoglobus fulgidus
>gi|2650032|gb|AAB90649.1| (AE001064) translation
initiation factor eIF-2, subunit gamma (eif2G)
[Archaeoglobus fulgidus]
Length = 424
Score = 534 bits (1361), Expect = e-151
Identities = 262/403 (65%), Positives = 323/403 (80%), Gaps = 6/403 (1%)
Query: 11 EVNIGMVGHVDHGKTTLTKALTGVWTDTHSEELRRGITIKIGFADAEIRRCPNCG---RY 67
EVNIG+VGHVDHGKTTL AL+GVWTD HSEEL+RGI+IK+G+ADA R+CP C Y
Sbjct: 25 EVNIGLVGHVDHGKTTLVAALSGVWTDRHSEELKRGISIKLGYADATFRKCPECEPPEAY 84
Query: 68 STSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMDGAILVIAANEPCPRPQTR 127
+ +CP G ETE +R VSF+D+PGHE LM TML+GA++MDGA+LVIAANE CPRPQT+
Sbjct: 85 TVEEICPIHGVETEILRTVSFVDSPGHEMLMATMLSGAAIMDGAVLVIAANEKCPRPQTK 144
Query: 128 EHLMALQIIGQKNIIIAQNKIELVDKEKALENYRQIKEFIEGTVAENAPIIPISALHGAN 187
EHLMALQIIG I+IAQNKI++V +E+ LENY++IKEF++GTVAENAPIIPISA N
Sbjct: 145 EHLMALQIIGIDKIVIAQNKIDIVSRERVLENYQEIKEFVKGTVAENAPIIPISAQQKVN 204
Query: 188 IDVLVKAIEDFIPTPKRDPNKPPKMLVLRSFDVNKPGTPPEKLVGGVLGGSIVQGKLKVG 247
+D L++AIE+ IPTP+RD + PP M V RSFDVNKPGTPPEKL+GGVLGGS+ +G+++VG
Sbjct: 205 MDALIEAIEETIPTPERDLDSPPLMHVARSFDVNKPGTPPEKLLGGVLGGSLSRGRIRVG 264
Query: 248 DEIEIRPGVPYEEHGRIKYEPITTEIVSLQAGGQFVEEAYPGGLVGVGTKLDPYLTKGDL 307
DEIEIRPGV E R + P+ TE+ S+ A G+FV+EA PGGLVG+ TKLDP LTK D
Sbjct: 265 DEIEIRPGVKDE---RGNWNPLFTEVQSIVASGRFVDEATPGGLVGIATKLDPTLTKSDA 321
Query: 308 MAGNVVGKPGKLPPVWDSLRLEVHLLERVVGTEQELKVEPIKRKEVLLLNVGTARTMGLV 367
+ GNVVG PG LP V S +EV+LLERVVG ++E++VE IK E L+L VGTA T+G+V
Sbjct: 322 LVGNVVGHPGNLPDVLTSFTMEVNLLERVVGLDEEMEVEKIKMNEPLMLAVGTAITLGVV 381
Query: 368 TGLGKDEIEVKLQIPVCAEPGDRVAISRQIGSRWRLIGYGIIK 410
T D +EVKL+ PVCA+ G RVAISR++GSRWRLIG GII+
Sbjct: 382 TSARDDIVEVKLRRPVCADKGSRVAISRRVGSRWRLIGAGIIR 424
>sp|Q9Y9C1|IF2G_AERPE PROBABLE TRANSLATION INITIATION FACTOR 2 GAMMA SUBUNIT
(EIF-2-GAMMA) >gi|7443487|pir||C72465 probable
translation initiation factor aIF-2 gamma subunit
APE2366 - Aeropyrum pernix (strain K1)
>gi|5106068|dbj|BAA81379.1| (AP000064) 420aa long
hypothetical eukaryotic translational initiation factor
2 gamma subunit [Aeropyrum pernix]
Length = 420
Score = 513 bits (1306), Expect = e-144
Identities = 255/409 (62%), Positives = 324/409 (78%), Gaps = 7/409 (1%)
Query: 8 RQAEVNIGMVGHVDHGKTTLTKALTGVWTDTHSEELRRGITIKIGFADAEIRRCPNCG-- 65
RQ EVNIG+VGHVDHGKTTL +ALTGVWT HSEE+RRG+TIK+G+AD E+ C CG
Sbjct: 13 RQPEVNIGVVGHVDHGKTTLVQALTGVWTMRHSEEIRRGMTIKLGYADGEVWECEGCGFP 72
Query: 66 -RYSTSPVCPYCGHETE--FVRRVSFIDAPGHEALMTTMLAGASLMDGAILVIAANEPCP 122
R+S PVC C + RRVS++DAPGHE LM TML+GA+LMDGA+LV+AANEPCP
Sbjct: 73 ERFSPEPVCE-CDPQASASLRRRVSYVDAPGHEILMATMLSGAALMDGALLVVAANEPCP 131
Query: 123 RPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALENYRQIKEFIEGTVAENAPIIPISA 182
+PQT+EHL+AL+IIG KNI+I QNK+++V +E+A E+Y++I FI+GT+AE +PIIP+SA
Sbjct: 132 QPQTKEHLVALEIIGIKNIVIVQNKVDVVSRERAKESYQEILNFIKGTIAEGSPIIPVSA 191
Query: 183 LHGANIDVLVKAIEDFIPTPKRDPNKPPKMLVLRSFDVNKPGTPPEKLVGGVLGGSIVQG 242
L ANID ++ AIE FIPTP RD +KPP M + RSFDVN+PGTPPE+LVGGV+GGSI+QG
Sbjct: 192 LKRANIDAVLAAIEKFIPTPPRDLDKPPVMYISRSFDVNRPGTPPERLVGGVVGGSIIQG 251
Query: 243 KLKVGDEIEIRPGVPYEE-HGRIKYEPITTEIVSLQAGGQFVEEAYPGGLVGVGTKLDPY 301
+VGDEIEI PGV + GR++Y + T I SL+ G VEEA PGGLV +GT+LDP
Sbjct: 252 VFRVGDEIEISPGVAVRKPGGRVEYVRLHTTITSLRFGSIEVEEARPGGLVAIGTQLDPS 311
Query: 302 LTKGDLMAGNVVGKPGKLPPVWDSLRLEVHLLERVVGTEQELKVEPIKRKEVLLLNVGTA 361
+TK D + GNVVGKPG+LP +LR+E HLLE+VVG ++E +VEPI+R E+L+L+VGTA
Sbjct: 312 VTKADNLVGNVVGKPGELPEPLTTLRIEHHLLEKVVGMKEEARVEPIRRGEMLMLSVGTA 371
Query: 362 RTMGLVTGLGKDEIEVKLQIPVCAEPGDRVAISRQIGSRWRLIGYGIIK 410
T+G+VT GKDEIEV+L+ PV P RVA+SR+I RWRLIG+G+IK
Sbjct: 372 ITLGVVTRAGKDEIEVQLRRPVVTWPKARVALSRRIMGRWRLIGWGLIK 420
>gb|AAG20211.1| (AE005097) translation initiation factor eIF-2 subunit gamma; Eif2g
[Halobacterium sp. NRC-1]
Length = 414
Score = 488 bits (1242), Expect = e-137
Identities = 230/407 (56%), Positives = 306/407 (74%), Gaps = 3/407 (0%)
Query: 8 RQAEVNIGMVGHVDHGKTTLTKALTGVWTDTHSEELRRGITIKIGFADAEIRRCPNCGR- 66
RQ EVNIG+VGHVDHGKTTL +AL+G WTD HSEE++RGI+I++G+ADA +RRCP+C
Sbjct: 6 RQPEVNIGLVGHVDHGKTTLVRALSGEWTDQHSEEMKRGISIRLGYADATLRRCPDCDEP 65
Query: 67 --YSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMDGAILVIAANEPCPRP 124
Y+ + CP TE R VSF+DAPGHE LM TML+GA+LMDGA+LV+ ANEP P+P
Sbjct: 66 ECYTVAETCPEHDTATEIERTVSFVDAPGHETLMATMLSGAALMDGAVLVVGANEPVPQP 125
Query: 125 QTREHLMALQIIGQKNIIIAQNKIELVDKEKALENYRQIKEFIEGTVAENAPIIPISALH 184
QT EHLMAL IIG +NI+IAQNK++LVD E+A +NY +I+ F+EGTVAE+AP++P+SA
Sbjct: 126 QTEEHLMALDIIGIENIVIAQNKVDLVDAEEARQNYEEIQAFVEGTVAEDAPVVPVSAEQ 185
Query: 185 GANIDVLVKAIEDFIPTPKRDPNKPPKMLVLRSFDVNKPGTPPEKLVGGVLGGSIVQGKL 244
N+D+++ A++ I TP RDP+ P + RSFD+N+PGT L+GGV+GGS+V G+L
Sbjct: 186 EINVDLVIDALQTEIATPDRDPSADPLLYAARSFDINRPGTEWGGLLGGVIGGSLVDGEL 245
Query: 245 KVGDEIEIRPGVPYEEHGRIKYEPITTEIVSLQAGGQFVEEAYPGGLVGVGTKLDPYLTK 304
+ GDE+E+RPG EE G+ ++ P+TT++ SLQAGG+ V+ A PGGL+GVGT LDP LTK
Sbjct: 246 EAGDELELRPGREVEEGGKTEWRPVTTDVRSLQAGGEDVDSASPGGLLGVGTGLDPSLTK 305
Query: 305 GDLMAGNVVGKPGKLPPVWDSLRLEVHLLERVVGTEQELKVEPIKRKEVLLLNVGTARTM 364
GD +AG V G PG LPP W+S ++V LLER+VG +++ I E L+L VGTA T+
Sbjct: 306 GDALAGQVAGPPGSLPPTWESFEMDVDLLERLVGAADGEQIDDISTGEPLMLTVGTATTV 365
Query: 365 GLVTGLGKDEIEVKLQIPVCAEPGDRVAISRQIGSRWRLIGYGIIKE 411
G VT E EV L+ PVCA G ++AI+R++G+RWRLIG G + E
Sbjct: 366 GSVTSARDGECEVALKRPVCAPAGAKIAINRRVGARWRLIGVGTLTE 412
>gb|AAK40740.1| Translation initiation factor eiF 2 gamma (eif2G) [Sulfolobus
solfataricus]
Length = 415
Score = 473 bits (1203), Expect = e-132
Identities = 233/408 (57%), Positives = 310/408 (75%), Gaps = 6/408 (1%)
Query: 9 QAEVNIGMVGHVDHGKTTLTKALTGVWTDTHSEELRRGITIKIGFADAEIRRCPNCGR-- 66
Q EVNIG+VGHVDHGKTTL +A+TG+WT HSEEL+RG+TIK+G+A+ I C +C +
Sbjct: 7 QPEVNIGVVGHVDHGKTTLVQAITGIWTSKHSEELKRGMTIKLGYAETNIGVCESCKKPE 66
Query: 67 -YSTSPVCPYCGHETE--FVRRVSFIDAPGHEALMTTMLAGASLMDGAILVIAANEPCPR 123
Y T P C CG + E F+RR+SFIDAPGHE LM TML+GA+LMDGAILV+AANEP P+
Sbjct: 67 AYVTEPSCKSCGSDDEPKFLRRISFIDAPGHEVLMATMLSGAALMDGAILVVAANEPFPQ 126
Query: 124 PQTREHLMALQIIGQKNIIIAQNKIELVDKEKALENYRQIKEFIEGTVAENAPIIPISAL 183
PQTREH +AL IIG KN+II QNK+++V KE+AL YRQIK+F +GT AEN PIIP+SAL
Sbjct: 127 PQTREHFVALGIIGVKNLIIVQNKVDVVSKEEALSQYRQIKQFTKGTWAENVPIIPVSAL 186
Query: 184 HGANIDVLVKAIEDFIPTPKRDPNKPPKMLVLRSFDVNKPGTPPEKLVGGVLGGSIVQGK 243
H NID L++ IE++I TP RD ++ P MLV+RSFDVNKPGT +L GGV+GGSI+QG
Sbjct: 187 HKINIDSLIEGIEEYIKTPYRDLSQKPVMLVIRSFDVNKPGTQFNELKGGVIGGSIIQGL 246
Query: 244 LKVGDEIEIRPGVPYEEHGRIKYEPITTEIVSLQAGGQFVEEAYPGGLVGVGTKLDPYLT 303
KV EI++ PG+ E+ G++ YEPI T+I S++ G + +EA PGGLV +GT LDP LT
Sbjct: 247 FKVDQEIKVLPGLRVEKQGKVSYEPIFTKISSIRFGDEEFKEAKPGGLVAIGTYLDPSLT 306
Query: 304 KGDLMAGNVVGKPGKLPPVWDSLRLEVHLLERVVGTEQELKVEPIKRKEVLLLNVGTART 363
K D + G+++ PV ++R++ +LLERVVG ++ LKV+PI+ KE L+L+VG++ T
Sbjct: 307 KADNLLGSIITLADAEVPVLWNIRIKYNLLERVVGAKEMLKVDPIRAKETLMLSVGSSTT 366
Query: 364 MGLVTGLGKDEIEVKLQIPVCAEPGD-RVAISRQIGSRWRLIGYGIIK 410
+G+VT + KDEIEV+L+ PV + R ISRQI RWR+IG+G+++
Sbjct: 367 LGIVTSVKKDEIEVELRRPVAVWSNNIRTVISRQIAGRWRMIGWGLVE 414
>emb|CAC11467.1| (AL445063) probable translation initiation factor aIF-2, gamma
chain [Thermoplasma acidophilum]
Length = 411
Score = 472 bits (1201), Expect = e-132
Identities = 236/413 (57%), Positives = 302/413 (72%), Gaps = 8/413 (1%)
Query: 1 MGEKRKSRQAEVNIGMVGHVDHGKTTLTKALTGVWTDTHSEELRRGITIKIGFADAEIRR 60
M K K Q VNIGMVGHVDHGK+TLT ALTG TDTHSEE++RGI+IK+G+AD I R
Sbjct: 1 MISKLKMPQPSVNIGMVGHVDHGKSTLTLALTGTKTDTHSEEIKRGISIKLGYADTPIYR 60
Query: 61 CPNCGRYSTSPVCPYC---GHETEFVRRVSFIDAPGHEALMTTMLAGASLMDGAILVIAA 117
C Y +S Y G + R +S +DAPGHE LM TML+G++LM+GA+LVIAA
Sbjct: 61 C-----YDSSGNVHYTREKGENCDLERVISIVDAPGHETLMATMLSGSALMNGALLVIAA 115
Query: 118 NEPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALENYRQIKEFIEGTVAENAPI 177
NE CP+PQTREHL AL+I+G KNIII QNKI+LV +E+A+E+YR+IK F++G++AENAPI
Sbjct: 116 NEHCPQPQTREHLTALEIMGIKNIIIVQNKIDLVTRERAIESYREIKNFVKGSIAENAPI 175
Query: 178 IPISALHGANIDVLVKAIEDFIPTPKRDPNKPPKMLVLRSFDVNKPGTPPEKLVGGVLGG 237
IP+SA H NID L +AIE +IP+PK + N P M + RSFD+N+PGTP +L GGV+GG
Sbjct: 176 IPVSAYHSTNIDALFEAIEKYIPSPKFNENDDPIMYIARSFDINRPGTPVSELKGGVIGG 235
Query: 238 SIVQGKLKVGDEIEIRPGVPYEEHGRIKYEPITTEIVSLQAGGQFVEEAYPGGLVGVGTK 297
S+ QG+ +GDEIEI PG+ + + + +TTE+VSL AG + PGGL +GTK
Sbjct: 236 SLTQGEFALGDEIEIVPGIQTTKGNKTVWNNVTTEVVSLMAGKYSYDRIRPGGLAAIGTK 295
Query: 298 LDPYLTKGDLMAGNVVGKPGKLPPVWDSLRLEVHLLERVVGTEQELKVEPIKRKEVLLLN 357
LDP+LTKGD G + G GK+PPV S+RLE HLL+RVVG++QEL VEPI+ KE L+
Sbjct: 296 LDPFLTKGDAFTGRIAGHVGKVPPVAFSMRLESHLLKRVVGSDQELNVEPIRPKETLMFT 355
Query: 358 VGTARTMGLVTGLGKDEIEVKLQIPVCAEPGDRVAISRQIGSRWRLIGYGIIK 410
V TA T+G+V + EIEV L+ PV A G RVAI R++ +RWRLIGYGII+
Sbjct: 356 VATANTVGVVNAMKGSEIEVSLKYPVAAFNGMRVAIGRRVMNRWRLIGYGIIQ 408
>sp|O93626|IF2G_HALHA PROBABLE TRANSLATION INITIATION FACTOR 2 GAMMA SUBUNIT
(EIF-2-GAMMA) >gi|11277752|pir||T43851 translation
initiation factor aIF-2 gamma chain [similarity] -
Halobacterium salinarum >gi|4001706|dbj|BAA35082.1|
(AB015764) eukarytoc initiation factor [Halobacterium
halobium]
Length = 414
Score = 469 bits (1194), Expect = e-131
Identities = 227/408 (55%), Positives = 304/408 (73%), Gaps = 5/408 (1%)
Query: 8 RQAEVNIGMVGHVDHGKTTLTKALTGVWTDTHSEELRRGITIKIGFADAEIRRCPNCGR- 66
RQ EVNIG+VGHVDHGKTTL +AL+G WTD HSEE++RGI+I++G+ADA +RRCP+C
Sbjct: 6 RQPEVNIGLVGHVDHGKTTLVRALSGEWTDQHSEEMKRGISIRLGYADATLRRCPDCDDP 65
Query: 67 --YSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMDGAILVIAANEPCPRP 124
Y+ + CP TE R VSF+DAPGHE LM TML+GA+LMDGA+LV+ ANEP P+P
Sbjct: 66 ECYTVAETCPEHDTATEIERTVSFVDAPGHETLMATMLSGAALMDGAVLVVGANEPVPQP 125
Query: 125 QTREHLMALQIIGQKNIIIAQNKIELVDKEKALENYRQIKEFIEGTVAENAPIIPISALH 184
QT EHLMAL IIG +NI+IAQNK++LVD E+A +NY +I+ F+EGTVAE+AP++P+SA
Sbjct: 126 QTEEHLMALDIIGIENIVIAQNKVDLVDAEEARQNYEEIQAFVEGTVAEDAPVVPVSAEQ 185
Query: 185 GANIDVLVKAIEDFIPTPKRDPNKPPKMLVLRSFDVNKPGTPPEKLVGGVLGGSIVQGKL 244
N+D+++ A++ I TP RDP+ P + RSFD+N+PGT L+GGV+GGS+V G+L
Sbjct: 186 EINVDLVIDALQTEIATPDRDPSADPLLYAARSFDINRPGTEWGGLLGGVIGGSLVDGEL 245
Query: 245 KVGDEIEIRPGVPYEEHGRIKYEPITTEIVSLQAGGQFVEEAYPGGLVGVGTKLDPYLTK 304
+ GDE+E+RPG EE G+ ++ P+TT++ SLQAGG+ V+ A PGGL+GVGT LDP LTK
Sbjct: 246 EAGDELELRPGREVEEGGKTEWRPVTTDVRSLQAGGEDVDSASPGGLLGVGTGLDPSLTK 305
Query: 305 GDLMAG-NVVGKPGKLPPVWDSLRLEVHLLERVVGTEQELKVEPIKRKEVLLLNVGTART 363
GD +AG G+P LPP W+S ++V LLER+VG +++ I E L+ VGTA T
Sbjct: 306 GDALAGPGRRGRPAGLPPTWESFEMDVDLLERLVGAAAAEQIDDISTGEPLMPTVGTATT 365
Query: 364 MGLVTGLGKDEIEVKLQIPVCAEPGDRVAISRQIGSRWRLIGYGIIKE 411
+G VT E EV L+ PVCA P ++AI+R++G+RWRLIG G + E
Sbjct: 366 VGSVTRPRDGECEVALKRPVCA-PAGKIAINRRVGARWRLIGVGTLTE 412
>gb|AAD08941.1| (AC005724) putative translation initiation factor eIF-2B gamma
subunit [Arabidopsis thaliana]
Length = 465
Score = 391 bits (993), Expect = e-107
Identities = 203/423 (47%), Positives = 283/423 (65%), Gaps = 19/423 (4%)
Query: 7 SRQAEVNIGMVGHVDHGKTTLTKALTGVWTDTHSEELRRGITIKIGFADAEIRRCPNCGR 66
SRQA +NIG +GHV HGK+T+ KA++GV T EL R ITIK+G+A+A+I +C C R
Sbjct: 29 SRQATINIGTIGHVAHGKSTIVKAVSGVHTVKFKSELERNITIKLGYANAKIYKCEKCPR 88
Query: 67 ----------YSTSPVCPYCGHET---EFVRRVSFIDAPGHEALMTTMLAGASLMDGAIL 113
+P C GHE + +R VSF+D PGH+ LM TML GA++MDGA+L
Sbjct: 89 PVAYKSFGSGKEDNPSCDVSGHEKYKMKLLRHVSFVDCPGHDILMATMLNGAAIMDGALL 148
Query: 114 VIAANEPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALENYRQIKEFIEGTVAE 173
+IAANE CP+PQT EHL ++ ++ K+III QNKI+L+ + +A++ + I+ FI T AE
Sbjct: 149 IIAANETCPQPQTAEHLASVDMMHLKDIIIIQNKIDLIQENEAIKQHEDIQRFITNTNAE 208
Query: 174 NAPIIPISALHGANIDVLVKAIEDFIPTPKRDPNKPPKMLVLRSFDVNKPGTPPEKLVGG 233
API+P+SA NIDVL + I IP P RD PP+M+V+RSFDVNKPG+ + + GG
Sbjct: 209 GAPIVPVSAQLKYNIDVLCEYIVKKIPLPVRDFVSPPRMIVIRSFDVNKPGSDYDGMKGG 268
Query: 234 VLGGSIVQGKLKVGDEIEIRPGVP-YEEHGRIKYEPITTEIVSLQAGGQFVEEAYPGGLV 292
V GGSI+QG LKVG IEIRPG+ +E+G K PI T I SL A ++ A PGGL+
Sbjct: 269 VAGGSILQGVLKVGHIIEIRPGITRKDENGDTKCTPIYTRITSLYAEQNELQFAVPGGLI 328
Query: 293 GVGTKLDPYLTKGDLMAGNVVGKPGKLPPVWDSLRLEVHLLERVVG-----TEQELKVEP 347
G+GT +DP LT+GD + G V+G+ G LP V+ L + LL R++G TE++++V
Sbjct: 329 GIGTSMDPTLTRGDRLVGQVLGEIGTLPDVYVELEVSFQLLTRLIGVKTKETERQMRVSK 388
Query: 348 IKRKEVLLLNVGTARTMGLVTGLGKDEIEVKLQIPVCAEPGDRVAISRQIGSRWRLIGYG 407
+ + E+L+LN+G+ T +V G+ KD ++V L +PVC G++VAISR++ WRLIG G
Sbjct: 389 LVKGEILMLNIGSMSTGAMVIGVKKDMVKVNLTLPVCTSIGEKVAISRRVDRHWRLIGRG 448
Query: 408 IIK 410
I+
Sbjct: 449 QIE 451
>sp|Q24208|IF2G_DROME EUKARYOTIC TRANSLATION INITIATION FACTOR 2 GAMMA SUBUNIT
(EIF-2-GAMMA) >gi|630857|pir||S46941 translation
initiation factor eIF-2 gamma chain - fruit fly
(Drosophila melanogaster) >gi|1079092|pir||S47005
hypothetical protein - fruit fly (Drosophila
melanogaster) >gi|516306|emb|CAA56375.1| (X80069) 51KDa
protein [Drosophila melanogaster]
>gi|7299981|gb|AAF55153.1| (AE003708) Su(var)3-9 gene
product [alt 2] [Drosophila melanogaster]
>gi|8346781|emb|CAB93767.1| (AJ290956) eukaryotic
translation initiation factor 2 gamma [Drosophila
melanogaster]
Length = 475
Score = 383 bits (972), Expect = e-105
Identities = 201/423 (47%), Positives = 278/423 (65%), Gaps = 20/423 (4%)
Query: 7 SRQAEVNIGMVGHVDHGKTTLTKALTGVWTDTHSEELRRGITIKIGFADAEIRRC--PNC 64
SRQA +NIG +GHV HGK+T+ KA++GV T EL R ITIK+G+A+A+I +C P C
Sbjct: 36 SRQATINIGTIGHVAHGKSTVVKAISGVQTVRFKNELERNITIKLGYANAKIYKCDNPKC 95
Query: 65 GRYST----------SPVCPY--CGHETEFVRRVSFIDAPGHEALMTTMLAGASLMDGAI 112
R ++ S C C VR VSF+D PGH+ LM TML GA++MD A+
Sbjct: 96 PRPASFVSDASSKDDSLPCTRLNCSGNFRLVRHVSFVDCPGHDILMATMLNGAAVMDAAL 155
Query: 113 LVIAANEPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALENYRQIKEFIEGTVA 172
L+IA NE CP+PQT EHL A++I+ K I+I QNKI+L+ + +A E Y +I +F++GTVA
Sbjct: 156 LLIAGNESCPQPQTSEHLAAIEIMKLKQILILQNKIDLIKESQAKEQYEEITKFVQGTVA 215
Query: 173 ENAPIIPISALHGANIDVLVKAIEDFIPTPKRDPNKPPKMLVLRSFDVNKPGTPPEKLVG 232
E APIIPISA NIDVL + I + IP P RD N PP+++V+RSFDVNKPG L G
Sbjct: 216 EGAPIIPISAQLKYNIDVLCEYIVNKIPVPPRDFNAPPRLIVIRSFDVNKPGCEVADLKG 275
Query: 233 GVLGGSIVQGKLKVGDEIEIRPG-VPYEEHGRIKYEPITTEIVSLQAGGQFVEEAYPGGL 291
GV GGSI+ G LKVG EIE+RPG V + G I PI + IVSL A ++ A PGGL
Sbjct: 276 GVAGGSILSGVLKVGQEIEVRPGVVTKDSDGNITCRPIFSRIVSLFAEQNELQYAVPGGL 335
Query: 292 VGVGTKLDPYLTKGDLMAGNVVGKPGKLPPVWDSLRLEVHLLERVVGTEQE-----LKVE 346
+GVGTK+DP L + D + G V+G G+LP ++ L + +LL R++G + +VE
Sbjct: 336 IGVGTKIDPTLCRADRLVGQVLGAVGQLPDIYQELEISYYLLRRLLGVRTDGDKKGARVE 395
Query: 347 PIKRKEVLLLNVGTARTMGLVTGLGKDEIEVKLQIPVCAEPGDRVAISRQIGSRWRLIGY 406
+++ E+LL+N+G+ T G ++ D ++ L PVC E G+++A+SR++ + WRLIG+
Sbjct: 396 KLQKNEILLVNIGSLSTGGRISATKGDLAKIVLTTPVCTEKGEKIALSRRVENHWRLIGW 455
Query: 407 GII 409
G I
Sbjct: 456 GQI 458
>sp|Q09130|IF2G_SCHPO EUKARYOTIC TRANSLATION INITIATION FACTOR 2 GAMMA SUBUNIT
(EIF-2-GAMMA) >gi|7490539|pir||T39732 translation
initiation factor eIF-2 gamma subunit [imported] -
fission yeast (Schizosaccharomyces pombe)
>gi|1049318|gb|AAC49675.1| (U37354) initiation factor
eIF-2 gamma subunit [Schizosaccharomyces pombe]
>gi|5738530|emb|CAB52807.1| (AL109846) eukaryotic
translation initiation factor 2 gamma subunit
[Schizosaccharomyces pombe]
Length = 446
Score = 377 bits (959), Expect = e-104
Identities = 199/422 (47%), Positives = 278/422 (65%), Gaps = 17/422 (4%)
Query: 7 SRQAEVNIGMVGHVDHGKTTLTKALTGVWTDTHSEELRRGITIKIGFADAEIRRC----- 61
SRQA +NIG +GHV HGK+T+ KA++GV T EL R ITIK+G+A+A+I +C
Sbjct: 19 SRQATINIGTIGHVAHGKSTVVKAISGVHTVRFKNELERNITIKLGYANAKIYKCSNEEC 78
Query: 62 --PNCGR-YSTS----PVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMDGAILV 114
P C R YS++ P C C VR VSF+D PGH+ LM TML GA++MD A+L+
Sbjct: 79 PRPGCYRSYSSNKEDHPPCEICNSPMNLVRHVSFVDCPGHDILMATMLNGAAVMDAALLL 138
Query: 115 IAANEPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALENYRQIKEFIEGTVAEN 174
IA NE CP+PQT EHL A++I+ K+III QNK++L+ + A E+Y+ I +FI+GTVAEN
Sbjct: 139 IAGNESCPQPQTSEHLAAIEIMQLKHIIILQNKVDLIRESAAEEHYQSILKFIKGTVAEN 198
Query: 175 APIIPISALHGANIDVLVKAIEDFIPTPKRDPNKPPKMLVLRSFDVNKPGTPPEKLVGGV 234
+PI+PISA NID +++ I IP P RD P+++V+RSFDVNKPG + L GGV
Sbjct: 199 SPIVPISAQLKYNIDAILEYIVKKIPIPVRDFTTAPRLIVIRSFDVNKPGAEVDDLKGGV 258
Query: 235 LGGSIVQGKLKVGDEIEIRPG-VPYEEHGRIKYEPITTEIVSLQAGGQFVEEAYPGGLVG 293
GGSI+ G L++ DEIEIRPG V ++ GRI+ +PI + I+SL A ++ A PGGL+G
Sbjct: 259 AGGSILTGVLRLNDEIEIRPGIVTKDDDGRIRCQPIFSRIISLFAEHNDLKIAVPGGLIG 318
Query: 294 VGTKLDPYLTKGDLMAGNVVGKPGKLPPVWDSLRLEVHLLERVVGT----EQELKVEPIK 349
VGT +DP L + D + G V+G G LP V+ L + LL R++G + KV+ +
Sbjct: 319 VGTTVDPTLCRADRLVGQVLGSKGNLPEVYTELEINYFLLRRLLGVKSGDKNTTKVQKLA 378
Query: 350 RKEVLLLNVGTARTMGLVTGLGKDEIEVKLQIPVCAEPGDRVAISRQIGSRWRLIGYGII 409
+ EVL++N+G+ T G V + D ++ L P C E G++VA+SR+I WRLIG+ +
Sbjct: 379 KNEVLMVNIGSTSTGGRVMMVKADMAKILLTAPACTEIGEKVALSRRIEKHWRLIGWAKV 438
Query: 410 KE 411
E
Sbjct: 439 VE 440
>emb|CAB98197.1| (AJ290961) eukaryotic translation initiation factor 2 gamma [Clytus
arietis]
Length = 473
Score = 373 bits (948), Expect = e-102
Identities = 199/424 (46%), Positives = 275/424 (63%), Gaps = 20/424 (4%)
Query: 7 SRQAEVNIGMVGHVDHGKTTLTKALTGVWTDTHSEELRRGITIKIGFADAEIRRCPNC-- 64
SRQA +NIG +GHV HGK+T+ KA++GV T EL R ITIK+G+A+A+I +C N
Sbjct: 38 SRQATINIGTIGHVAHGKSTVVKAISGVQTVRFKNELERNITIKLGYANAKIYKCDNAKC 97
Query: 65 ---GRYSTSP---------VCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMDGAI 112
G Y + + P C + VR VSF+D PGH+ LM TML GA++MD A+
Sbjct: 98 PRPGCYISGSSSKDDNFPCLRPACSGRFQLVRHVSFVDCPGHDILMATMLNGAAVMDAAL 157
Query: 113 LVIAANEPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALENYRQIKEFIEGTVA 172
L+IA NE CP+PQT EHL A++I+ K+III QNKI+LV + +A E + QI +F++GTVA
Sbjct: 158 LLIAGNESCPQPQTSEHLAAIEIMKLKHIIILQNKIDLVKEGQAKEQHEQIVKFVQGTVA 217
Query: 173 ENAPIIPISALHGANIDVLVKAIEDFIPTPKRDPNKPPKMLVLRSFDVNKPGTPPEKLVG 232
E APIIPISA NI+VL + I IP P RD P+++V+RSFDVNKPG L G
Sbjct: 218 EGAPIIPISAQLKYNIEVLCEYITKKIPIPVRDFTSEPRLIVIRSFDVNKPGCEVNDLKG 277
Query: 233 GVLGGSIVQGKLKVGDEIEIRPG-VPYEEHGRIKYEPITTEIVSLQAGGQFVEEAYPGGL 291
GV GGSI++G LKVG EIE+RPG V + G++ PI + IVSL ++ A PGGL
Sbjct: 278 GVAGGSILRGVLKVGQEIEVRPGLVSKDAEGKLTCRPIFSRIVSLYTEQNELQFAVPGGL 337
Query: 292 VGVGTKLDPYLTKGDLMAGNVVGKPGKLPPVWDSLRLEVHLLERVVGTEQE-----LKVE 346
+GVGTK++P L + D + G V+G G LP ++ L + +LL+R++G E KV+
Sbjct: 338 IGVGTKIEPTLCRADRLVGQVLGAVGALPSIFIELEVSYYLLKRLLGVRMEGDKKGAKVQ 397
Query: 347 PIKRKEVLLLNVGTARTMGLVTGLGKDEIEVKLQIPVCAEPGDRVAISRQIGSRWRLIGY 406
+ + EVLL+N+G+ T G V D ++ L PVC E G+++A+SR++ WRLIG+
Sbjct: 398 RLSKSEVLLVNIGSLSTGGRVVATKADLCKIALTNPVCTEIGEKIALSRRVEKHWRLIGW 457
Query: 407 GIIK 410
G I+
Sbjct: 458 GQIR 461
>gi|4503507 eukaryotic translation initiation factor 2, subunit 3 (gamma,
52kD); eukaryotic translation initiation factor 2G [Homo
sapiens] >gi|729816|sp|P41091|IF2G_HUMAN EUKARYOTIC
TRANSLATION INITIATION FACTOR 2 GAMMA SUBUNIT
(EIF-2-GAMMA) >gi|1082870|pir||A53048 translation
initiation factor eIF-2 gamma chain [validated] - human
>gi|306900|gb|AAA19696.1| (L19161) translation
initiation factor eIF-2 gamma subunit [Homo sapiens]
Length = 472
Score = 373 bits (947), Expect = e-102
Identities = 202/428 (47%), Positives = 279/428 (64%), Gaps = 28/428 (6%)
Query: 7 SRQAEVNIGMVGHVDHGKTTLTKALTGVWTDTHSEELRRGITIKIGFADAEIRRC--PNC 64
SRQA +NIG +GHV HGK+T+ KA++GV T EL R ITIK+G+A+A+I + P+C
Sbjct: 37 SRQATINIGTIGHVAHGKSTVVKAISGVHTVRFKNELERNITIKLGYANAKIYKLDDPSC 96
Query: 65 GRYSTSPVC-PYCGHET---------------EFVRRVSFIDAPGHEALMTTMLAGASLM 108
R P C CG T + VR VSF+D PGH+ LM TML GA++M
Sbjct: 97 PR----PECYRSCGSSTPDEFPTDIPGTKGNFKLVRHVSFVDCPGHDILMATMLNGAAVM 152
Query: 109 DGAILVIAANEPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALENYRQIKEFIE 168
D A+L+IA NE CP+PQT EHL A++I+ K+I+I QNKI+LV + +A E Y QI F++
Sbjct: 153 DAALLLIAGNESCPQPQTSEHLAAIEIMKLKHILILQNKIDLVKESQAKEQYEQILAFVQ 212
Query: 169 GTVAENAPIIPISALHGANIDVLVKAIEDFIPTPKRDPNKPPKMLVLRSFDVNKPGTPPE 228
GTVAE APIIPISA NI+V+ + I IP P RD P+++V+RSFDVNKPG +
Sbjct: 213 GTVAEGAPIIPISAQLKYNIEVVCEYIVKKIPVPPRDFTSEPRLIVIRSFDVNKPGCEVD 272
Query: 229 KLVGGVLGGSIVQGKLKVGDEIEIRPG-VPYEEHGRIKYEPITTEIVSLQAGGQFVEEAY 287
L GGV GGSI++G LKVG EIE+RPG V + G++ +PI ++IVSL A ++ A
Sbjct: 273 DLKGGVAGGSILKGVLKVGQEIEVRPGIVSKDSEGKLMCKPIFSKIVSLFAEHNDLQYAA 332
Query: 288 PGGLVGVGTKLDPYLTKGDLMAGNVVGKPGKLPPVWDSLRLEVHLLERVVGTEQE----- 342
PGGL+GVGTK+DP L + D M G V+G G LP ++ L + LL R++G E
Sbjct: 333 PGGLIGVGTKIDPTLCRADRMVGQVLGAVGALPEIFTELEISYFLLRRLLGVRTEGDKKA 392
Query: 343 LKVEPIKRKEVLLLNVGTARTMGLVTGLGKDEIEVKLQIPVCAEPGDRVAISRQIGSRWR 402
KV+ + + EVL++N+G+ T G V+ + D ++ L PVC E G+++A+SR++ WR
Sbjct: 393 AKVQKLSKNEVLMVNIGSLSTGGRVSAVKADLGKIVLTNPVCTEVGEKIALSRRVEKHWR 452
Query: 403 LIGYGIIK 410
LIG+G I+
Sbjct: 453 LIGWGQIR 460
>gi|6753738 eukaryotic translation initiation factor 2, subunit 3, structural
gene X-linked [Mus musculus]
>gi|7674080|sp|Q9Z0N1|IF2G_MOUSE EUKARYOTIC TRANSLATION
INITIATION FACTOR 2 GAMMA SUBUNIT X-LINKED (EIF-2-GAMMA
X) >gi|3790184|emb|CAA07099.1| (AJ006587) eIF2 gamma
[Mus musculus]
Length = 472
Score = 373 bits (947), Expect = e-102
Identities = 202/428 (47%), Positives = 279/428 (64%), Gaps = 28/428 (6%)
Query: 7 SRQAEVNIGMVGHVDHGKTTLTKALTGVWTDTHSEELRRGITIKIGFADAEIRRC--PNC 64
SRQA +NIG +GHV HGK+T+ KA++GV T EL R ITIK+G+A+A+I + P+C
Sbjct: 37 SRQATINIGTIGHVAHGKSTVVKAISGVHTVRFKNELERNITIKLGYANAKIYKLDDPSC 96
Query: 65 GRYSTSPVC-PYCGHET---------------EFVRRVSFIDAPGHEALMTTMLAGASLM 108
R P C CG T + VR VSF+D PGH+ LM TML GA++M
Sbjct: 97 PR----PECYRSCGSSTPDEFPTDIPGTKGNFKLVRHVSFVDCPGHDILMATMLNGAAVM 152
Query: 109 DGAILVIAANEPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALENYRQIKEFIE 168
D A+L+IA NE CP+PQT EHL A++I+ K+I+I QNKI+LV + +A E Y QI F++
Sbjct: 153 DAALLLIAGNESCPQPQTSEHLAAIEIMKLKHILILQNKIDLVKESQAKEQYEQILAFVQ 212
Query: 169 GTVAENAPIIPISALHGANIDVLVKAIEDFIPTPKRDPNKPPKMLVLRSFDVNKPGTPPE 228
GTVAE APIIPISA NI+V+ + I IP P RD P+++V+RSFDVNKPG +
Sbjct: 213 GTVAEGAPIIPISAQLKYNIEVVCEYIVKKIPVPPRDFTSEPRLIVIRSFDVNKPGCEVD 272
Query: 229 KLVGGVLGGSIVQGKLKVGDEIEIRPG-VPYEEHGRIKYEPITTEIVSLQAGGQFVEEAY 287
L GGV GGSI++G LKVG EIE+RPG V + G++ +PI ++IVSL A ++ A
Sbjct: 273 DLKGGVAGGSILKGVLKVGQEIEVRPGIVSKDSEGKLMCKPIFSKIVSLFAEHNDLQYAA 332
Query: 288 PGGLVGVGTKLDPYLTKGDLMAGNVVGKPGKLPPVWDSLRLEVHLLERVVGTEQE----- 342
PGGL+GVGTK+DP L + D M G V+G G LP ++ L + LL R++G E
Sbjct: 333 PGGLIGVGTKIDPTLCRADRMVGQVLGAVGALPEIFTELEISYFLLRRLLGVRTEGDKKA 392
Query: 343 LKVEPIKRKEVLLLNVGTARTMGLVTGLGKDEIEVKLQIPVCAEPGDRVAISRQIGSRWR 402
KV+ + + EVL++N+G+ T G V+ + D ++ L PVC E G+++A+SR++ WR
Sbjct: 393 AKVQKLSKNEVLMVNIGSLSTGGRVSAVKADLGKIVLTNPVCTEVGEKIALSRRVEKHWR 452
Query: 403 LIGYGIIK 410
LIG+G I+
Sbjct: 453 LIGWGQIR 460
>gi|6320863 gamma subunit of translational initiation factor eIF-2; Gcd11p
[Saccharomyces cerevisiae]
>gi|417179|sp|P32481|IF2G_YEAST EUKARYOTIC TRANSLATION
INITIATION FACTOR 2 GAMMA SUBUNIT (EIF-2-GAMMA)
>gi|477114|pir||A48117 translation initiation factor
eIF-2 gamma chain - yeast (Saccharomyces cerevisiae)
>gi|171571|gb|AAA34633.1| (L04268) negative regulator of
GCN4 [Saccharomyces cerevisiae]
>gi|603617|gb|AAB64558.1| (U18778) Gcd11p: subunit gamma
of translational initiation factor eIF2 [Saccharomyces
cerevisiae]
Length = 527
Score = 371 bits (943), Expect = e-102
Identities = 195/424 (45%), Positives = 280/424 (65%), Gaps = 19/424 (4%)
Query: 7 SRQAEVNIGMVGHVDHGKTTLTKALTGVWTDTHSEELRRGITIKIGFADAEIRRC----- 61
+RQA +NIG +GHV HGK+T+ +A++GV T +EL R ITIK+G+A+A+I +C
Sbjct: 96 NRQATINIGTIGHVAHGKSTVVRAISGVQTVRFKDELERNITIKLGYANAKIYKCQEPTC 155
Query: 62 --PNCGRY-----STSPVC--PYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMDGAI 112
P+C R SP C P C + VR VSF+D PGH+ LM+TML+GA++MD A+
Sbjct: 156 PEPDCYRSFKSDKEISPKCQRPGCPGRYKLVRHVSFVDCPGHDILMSTMLSGAAVMDAAL 215
Query: 113 LVIAANEPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALENYRQIKEFIEGTVA 172
L+IA NE CP+PQT EHL A++I+ K++II QNK++L+ +E ALE+ + I +FI GT+A
Sbjct: 216 LLIAGNESCPQPQTSEHLAAIEIMKLKHVIILQNKVDLMREESALEHQKSILKFIRGTIA 275
Query: 173 ENAPIIPISALHGANIDVLVKAIEDFIPTPKRDPNKPPKMLVLRSFDVNKPGTPPEKLVG 232
+ API+PISA NID + + I IP P RD P+++V+RSFDVNKPG E L G
Sbjct: 276 DGAPIVPISAQLKYNIDAVNEFIVKTIPVPPRDFMISPRLIVIRSFDVNKPGAEIEDLKG 335
Query: 233 GVLGGSIVQGKLKVGDEIEIRPG-VPYEEHGRIKYEPITTEIVSLQAGGQFVEEAYPGGL 291
GV GGSI+ G K+GDEIEIRPG V ++ G+I+ +PI + IVSL A ++ A PGGL
Sbjct: 336 GVAGGSILNGVFKLGDEIEIRPGIVTKDDKGKIQCKPIFSNIVSLFAEQNDLKFAVPGGL 395
Query: 292 VGVGTKLDPYLTKGDLMAGNVVGKPGKLPPVWDSLRLEVHLLERVVGT----EQELKVEP 347
+GVGTK+DP L + D + G VVG G LP ++ + + LL R++G +++ KV
Sbjct: 396 IGVGTKVDPTLCRADRLVGQVVGAKGHLPNIYTDIEINYFLLRRLLGVKTDGQKQAKVRK 455
Query: 348 IKRKEVLLLNVGTARTMGLVTGLGKDEIEVKLQIPVCAEPGDRVAISRQIGSRWRLIGYG 407
++ EVL++N+G+ T V + D ++L P C E +++A+SR+I WRLIG+
Sbjct: 456 LEPNEVLMVNIGSTATGARVVAVKADMARLQLTSPACTEINEKIALSRRIEKHWRLIGWA 515
Query: 408 IIKE 411
IK+
Sbjct: 516 TIKK 519
>gi|7242148 eukaryotic translation initiation factor 2, subunit 3, structural
gene Y-linked [Mus musculus]
>gi|7674081|sp|Q9Z0N2|IF2H_MOUSE EUKARYOTIC TRANSLATION
INITIATION FACTOR 2 GAMMA SUBUNIT Y-LINKED (EIF-2-GAMMA
Y) >gi|3790165|emb|CAA07097.1| (AJ006584) eIF2 gamma
[Mus musculus]
Length = 472
Score = 369 bits (938), Expect = e-101
Identities = 198/424 (46%), Positives = 277/424 (64%), Gaps = 20/424 (4%)
Query: 7 SRQAEVNIGMVGHVDHGKTTLTKALTGVWTDTHSEELRRGITIKIGFADAEIRR-----C 61
SRQA +NIG +GHV HGK+T+ KA++GV T EL R ITIK+G+A+A+I + C
Sbjct: 37 SRQATINIGTIGHVAHGKSTVVKAISGVHTVRFKNELERNITIKLGYANAKIYKLDDSSC 96
Query: 62 P------NCGRYSTSPV---CPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMDGAI 112
P +CG + P VR VSF+D PGH+ LM TML GA++MD A+
Sbjct: 97 PRPECYRSCGSSTPDEFPSDIPGTKGNFRLVRHVSFVDCPGHDILMATMLNGAAVMDAAL 156
Query: 113 LVIAANEPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALENYRQIKEFIEGTVA 172
L+IA NE CP+PQT EHL A++I+ K+I+I QNKI+LV + +A E Y QI F++GTVA
Sbjct: 157 LLIAGNESCPQPQTSEHLAAIEIMKLKHILILQNKIDLVKESQAKEQYEQILAFVQGTVA 216
Query: 173 ENAPIIPISALHGANIDVLVKAIEDFIPTPKRDPNKPPKMLVLRSFDVNKPGTPPEKLVG 232
E APIIPISA NI+V+ + I IP P RD P+++V+RSFDVNKPG + L G
Sbjct: 217 EGAPIIPISAQLKYNIEVVCEYIVKKIPVPLRDFTSEPRLIVIRSFDVNKPGCEVDDLKG 276
Query: 233 GVLGGSIVQGKLKVGDEIEIRPGVPYEE-HGRIKYEPITTEIVSLQAGGQFVEEAYPGGL 291
GV GGSI++G LKVG EIE+RPG+ ++ G++ +PI ++IVSL A ++ A PGGL
Sbjct: 277 GVAGGSILKGVLKVGQEIEVRPGIVSKDGEGKLMCKPIFSKIVSLFAEHNDLQYAAPGGL 336
Query: 292 VGVGTKLDPYLTKGDLMAGNVVGKPGKLPPVWDSLRLEVHLLERVVGTEQE-----LKVE 346
+GVGTK+DP L + D M G V+G G LP ++ L + LL R++G E KV+
Sbjct: 337 IGVGTKIDPTLCRADRMVGQVLGAVGALPEIFTELEISYFLLRRLLGVRTEGDKKAAKVQ 396
Query: 347 PIKRKEVLLLNVGTARTMGLVTGLGKDEIEVKLQIPVCAEPGDRVAISRQIGSRWRLIGY 406
+ + EVL++N+G+ T G V+ + D ++ L PVC E G+++A+SR++ WRLIG+
Sbjct: 397 KLSKNEVLMVNIGSLSTGGRVSAVKADLGKIVLTNPVCTEVGEKIALSRRVEKHWRLIGW 456
Query: 407 GIIK 410
G I+
Sbjct: 457 GQIR 460
>emb|CAB94834.1| (AJ290964) eukaryotic translation initiation factor 2 gamma
[Leptinotarsa decemlineata]
Length = 471
Score = 368 bits (934), Expect = e-101
Identities = 200/428 (46%), Positives = 273/428 (63%), Gaps = 28/428 (6%)
Query: 7 SRQAEVNIGMVGHVDHGKTTLTKALTGVWTDTHSEELRRGITIKIGFADAEIRRC--PNC 64
SRQA +NIG +GHV HGK+T+ KA++GV T EL R ITIK+G+A+A+I C P C
Sbjct: 38 SRQATINIGTIGHVAHGKSTVVKAISGVQTVRFKNELERNITIKLGYANAKIYHCDNPKC 97
Query: 65 GRYSTSPVC----------------PYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLM 108
R PVC C + VR VSF+D PGH+ LM TML GA++M
Sbjct: 98 PR----PVCFTSGSSSKDDNFPCTRQSCTGRFQLVRHVSFVDCPGHDILMATMLNGAAVM 153
Query: 109 DGAILVIAANEPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALENYRQIKEFIE 168
D A+L+IA NE CP+PQT EHL A++I+ K+III QNKI+LV + +A E QI +F++
Sbjct: 154 DAALLLIAGNESCPQPQTSEHLAAIEIMKLKHIIILQNKIDLVKEGQAKEQQEQIVKFVQ 213
Query: 169 GTVAENAPIIPISALHGANIDVLVKAIEDFIPTPKRDPNKPPKMLVLRSFDVNKPGTPPE 228
GTVAE APIIPISA N +VL + I IP P RD P+++V+RSFDVNKPG
Sbjct: 214 GTVAEGAPIIPISAQLKYNTEVLCEYIIKKIPVPLRDFTSEPRLIVIRSFDVNKPGCEVN 273
Query: 229 KLVGGVLGGSIVQGKLKVGDEIEIRPG-VPYEEHGRIKYEPITTEIVSLQAGGQFVEEAY 287
L GGV GGSI++G L+VG EIE+RPG V + G++ PI + IVSL A ++ A
Sbjct: 274 DLKGGVAGGSILRGVLRVGQEIEVRPGLVSKDPEGKLTCRPIFSRIVSLFAEQNELQFAV 333
Query: 288 PGGLVGVGTKLDPYLTKGDLMAGNVVGKPGKLPPVWDSLRLEVHLLERVVGTEQE----- 342
PGGL+GVGTK++P L + D + G V+G G LP ++ L + +LL+R++G E
Sbjct: 334 PGGLIGVGTKIEPTLCRADRLVGQVLGAVGALPSIFIELEVSYYLLKRLLGVRTEGDKKG 393
Query: 343 LKVEPIKRKEVLLLNVGTARTMGLVTGLGKDEIEVKLQIPVCAEPGDRVAISRQIGSRWR 402
KV+ + + EVLL+N+G+ T G V D ++ L PVC E G+++A+SR++ WR
Sbjct: 394 AKVQRLTKSEVLLVNIGSLSTGGRVAATKADLCKIALTNPVCTEVGEKIALSRRVEKHWR 453
Query: 403 LIGYGIIK 410
LIG+G I+
Sbjct: 454 LIGWGHIR 461
>gi|11436023 similar to eukaryotic translation initiation factor 2, subunit 3
(gamma, 52kD) (H. sapiens) [Homo sapiens]
Length = 472
Score = 365 bits (928), Expect = e-100
Identities = 196/424 (46%), Positives = 273/424 (64%), Gaps = 20/424 (4%)
Query: 7 SRQAEVNIGMVGHVDHGKTTLTKALTGVWTDTHSEELRRGITIKIGFADAEIRRC--PNC 64
SRQA +NIG +GHV HGK+T+ KA++GV T EL R ITIK+G+A+A+I + P+C
Sbjct: 37 SRQATINIGTIGHVAHGKSTVVKAISGVHTVRFKNELERNITIKLGYANAKIYQLDDPSC 96
Query: 65 GRYSTSPVC------------PYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMDGAI 112
R C P VR VSF+D PGH+ LM TML GA++MD A+
Sbjct: 97 PRPECYRSCGSSMPDEFPTDIPGTKGNFRLVRHVSFVDCPGHDILMATMLNGAAVMDAAL 156
Query: 113 LVIAANEPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALENYRQIKEFIEGTVA 172
L+IA NE CP+PQT EHL A++I+ K+I+I QNKI+LV + +A E Y QI F++GTVA
Sbjct: 157 LLIAGNESCPQPQTSEHLAAIEIMKLKHILILQNKIDLVKERQAKEQYEQILAFVQGTVA 216
Query: 173 ENAPIIPISALHGANIDVLVKAIEDFIPTPKRDPNKPPKMLVLRSFDVNKPGTPPEKLVG 232
E APIIPISA NI+V+ + I IP P RD P+++V+RSFDVNKPG + L G
Sbjct: 217 EGAPIIPISAQLKYNIEVVCEYIVKKIPVPPRDFTSEPRLIVIRSFDVNKPGCEVDDLKG 276
Query: 233 GVLGGSIVQGKLKVGDEIEIRPG-VPYEEHGRIKYEPITTEIVSLQAGGQFVEEAYPGGL 291
GV GGSI++G LKVG E E+RPG V + G++ + I ++IVSL A ++ A PGGL
Sbjct: 277 GVAGGSILKGVLKVGQETEVRPGIVSKDSEGKLMCKSIFSKIVSLFAEHNDLQYAAPGGL 336
Query: 292 VGVGTKLDPYLTKGDLMAGNVVGKPGKLPPVWDSLRLEVHLLERVVGTEQE-----LKVE 346
+GVGTK+DP L + D M G ++G G LP ++ L + LL R++G E KV+
Sbjct: 337 IGVGTKIDPTLCRADRMVGQILGAVGALPEIFTELEISYFLLRRLLGVRTEGDKKAAKVQ 396
Query: 347 PIKRKEVLLLNVGTARTMGLVTGLGKDEIEVKLQIPVCAEPGDRVAISRQIGSRWRLIGY 406
+ + EVL++N+G+ T G V+ + D ++ L PVC E G+++A+SR++ WRLIG+
Sbjct: 397 KLSKNEVLMVNIGSLSTGGRVSAVKADLGKIVLTNPVCTEVGEKIALSRRVEKHWRLIGW 456
Query: 407 GIIK 410
G I+
Sbjct: 457 GQIR 460
>pir||T00956 translation initiation factor eIF-2 gamma chain F20D22.6 -
Arabidopsis thaliana >gi|3142294|gb|AAC16745.1|
(AC002411) Strong similarity to initiation factor eIF-2,
gb|U37354 from S. pombe. ESTs gb|T41979, gb|N37284 and
gb|N37529 come from this gene. [Arabidopsis thaliana]
Length = 465
Score = 365 bits (927), Expect = e-100
Identities = 198/426 (46%), Positives = 280/426 (65%), Gaps = 23/426 (5%)
Query: 7 SRQAEVNIGMVGHVDHGKTTLTKALTGVWTDTHSEELRRGITIKIGFADAEIRRC----- 61
SRQA +NIG +GHV HGK+T+ KA++GV T EL R ITIK+G+A+A+I +C
Sbjct: 29 SRQATINIGTIGHVAHGKSTVVKAISGVQTVRFKNELERNITIKLGYANAKIYKCEDEKC 88
Query: 62 --PNC------GRYSTSPVCPYCGHET---EFVRRVSFIDAPGHEALMTTMLAGASLMDG 110
P C G+ T P C G E + +R VSF+D PGH+ LM TML GA++MDG
Sbjct: 89 PRPMCYKAYGSGKEDT-PNCDVPGFENSKMKLLRHVSFVDCPGHDILMATMLNGAAIMDG 147
Query: 111 AILVIAANEPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALENYRQIKEFIEGT 170
A+L+IAANE CP+PQT EHL A++I+ K+III QNKI+L+ + A+ + I++FI T
Sbjct: 148 ALLLIAANETCPQPQTSEHLAAVEIMQLKHIIILQNKIDLIQENVAINQHEAIQKFIMNT 207
Query: 171 VAENAPIIPISALHGANIDVLVKAIEDFIPTPKRDPNKPPKMLVLRSFDVNKPGTPPEKL 230
VA+ API+P+SA NIDV+ + I IP P+R+ PP M+V+RSFDVNKPG +++
Sbjct: 208 VADAAPIVPVSAQLKYNIDVVCEYIVKKIPIPERNFVSPPNMIVIRSFDVNKPGYEVDEI 267
Query: 231 VGGVLGGSIVQGKLKVGDEIEIRPG-VPYEEHGRIKYEPITTEIVSLQAGGQFVEEAYPG 289
GGV GGSI++G L+V IEIRPG V +E G K PI + I+SL A ++ A PG
Sbjct: 268 KGGVAGGSILRGVLRVNQLIEIRPGIVTKDERGNSKCTPIYSRIISLYAEQNELQFAVPG 327
Query: 290 GLVGVGTKLDPYLTKGDLMAGNVVGKPGKLPPVWDSLRLEVHLLERVV-----GTEQELK 344
GL+GVGT +DP LT+ D + G V+G+ G LP V+ L + LL R++ G+E++ K
Sbjct: 328 GLIGVGTTMDPTLTRADRLVGQVLGEIGSLPDVFVELEVNFFLLRRLLGVRTKGSEKQGK 387
Query: 345 VEPIKRKEVLLLNVGTARTMGLVTGLGKDEIEVKLQIPVCAEPGDRVAISRQIGSRWRLI 404
V + + E+L+LN+G+ T V G+ D +++L PVC G++VA+SR++ WRLI
Sbjct: 388 VSKLTKGEILMLNIGSMSTGAKVVGVKVDLAKLQLTAPVCTSKGEKVALSRRVEKHWRLI 447
Query: 405 GYGIIK 410
G+G I+
Sbjct: 448 GWGQIQ 453
>sp|O96719|IF2G_ENCCU EUKARYOTIC TRANSLATION INITIATION FACTOR 2 GAMMA SUBUNIT
(EIF-2-GAMMA) >gi|11277751|pir||T43813 translation
elongation factor eEF-2 [imported] - Encephalitozoon
cuniculi >gi|3776045|emb|CAA07260.1| (AJ006823)
elongation factor 2 [Encephalitozoon cuniculi]
Length = 439
Score = 363 bits (923), Expect = 2e-99
Identities = 191/417 (45%), Positives = 272/417 (64%), Gaps = 20/417 (4%)
Query: 8 RQAEVNIGMVGHVDHGKTTLTKALTGVWTDTHSEELRRGITIKIGFADAEIRRC------ 61
RQA +NIG +GHV HGK+T+ KA++G+ T EL R ITIK+G+A+A+I +C
Sbjct: 10 RQATLNIGTIGHVAHGKSTIVKAISGISTIKFKAELERNITIKLGYANAKIYKCDSKCVR 69
Query: 62 PNCGRY--STSP---VCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMDGAILVIA 116
PNC + S+SP C CG + VR VSF+D PGH+ LM TML G ++MD +L+IA
Sbjct: 70 PNCYQSFGSSSPDRLSCKKCGGTLKLVRHVSFVDCPGHDVLMATMLNGTAIMDAVLLLIA 129
Query: 117 ANEPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALENYRQIKEFIEGTVAENAP 176
ANEPCP+PQT EHL A++I+ K +++ QNKI+LV +E+ALE + QI++F++ T + P
Sbjct: 130 ANEPCPQPQTTEHLFAVEIMDLKKVLVVQNKIDLVSREQALEQHDQIQKFLK-TSNVSGP 188
Query: 177 IIPISALHGANIDVLVKAIEDFIPTPKRDPNKPPKMLVLRSFDVNKPGTPPEKLVGGVLG 236
+IP +A G NI L+ I ++IP P RD PKM+V+RSFDVN+PGT ++ GGV+G
Sbjct: 189 VIPTAAQIGVNIPALLDFIVNYIPEPVRDSTARPKMIVIRSFDVNRPGTRVCEMSGGVIG 248
Query: 237 GSIVQGKLKVGDEIEIRPGVPYEEHGRIKYEPITTEIVSLQAGGQFVEEAYPGGLVGVGT 296
GS+V G L+VGD+IEIRPG+ + R P +EIV L+A + EAYPGGL+GVGT
Sbjct: 249 GSLVTGMLRVGDKIEIRPGLVIRKGNRFVCRPFVSEIVFLKAESIDLSEAYPGGLIGVGT 308
Query: 297 KLDPYLTKGDLMAGNVVGKPGKLPPVWDSLRLEVHLLER--VVGTEQELKVEPIKRKEVL 354
+DP K D + G V+GK G LP ++ + +E L + + G+ +K E +
Sbjct: 309 TMDPSFCKADKLVGQVMGKLGFLPSIFHKITVEYSLFPKTTIQGSSN------LKEGEHV 362
Query: 355 LLNVGTARTMGLVTGLGKDEIEVKLQIPVCAEPGDRVAISRQIGSRWRLIGYGIIKE 411
LLN+G+ T ++ + + E L P C E G+R+AISR+I + WRLIG+G IK+
Sbjct: 363 LLNIGSTTTGSVIGRINETSGEFDLVKPACCEIGERIAISRKINNHWRLIGHGEIKD 419
>pir||T04935 translation initiation factor eIF-2 gamma chain T9A21.180 -
Arabidopsis thaliana >gi|2832707|emb|CAA16805.1|
(AL021713) translation initiation factor eIF-2 gamma
chain-like protein [Arabidopsis thaliana]
>gi|7268626|emb|CAB78835.1| (AL161548) translation
initiation factor eIF-2 gamma chain-like protein
[Arabidopsis thaliana]
Length = 471
Score = 354 bits (898), Expect = 1e-96
Identities = 192/424 (45%), Positives = 274/424 (64%), Gaps = 21/424 (4%)
Query: 7 SRQAEVNIGMVGHVDHGKTTLTKALTGVWTDTHSEELRRGITIKIGFADAEIRRC----- 61
SRQA +NIG +GHV HGK+T+ KA++GV T EL R ITIK+G+A+A+I +C
Sbjct: 35 SRQATINIGTIGHVAHGKSTIVKAISGVQTVRFKNELERNITIKLGYANAKIYKCEDDKC 94
Query: 62 --PNCGRYSTS-----PVCPYCGHET---EFVRRVSFIDAPGHEALMTTMLAGASLMDGA 111
P C + S P C G E R VS +D PGH+ LM TML GA+++DGA
Sbjct: 95 PRPMCYKSYGSGKEDNPTCDVPGFENCKMTLRRHVSCVDCPGHDILMATMLNGAAIVDGA 154
Query: 112 ILVIAANEPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALENYRQIKEFIEGTV 171
+L+IAANE CP+PQT EHL ++ ++ K+III QNKI+L++++ A E + I++FI T
Sbjct: 155 LLLIAANESCPQPQTAEHLASVDMMRLKHIIILQNKIDLINEKAATEQHEAIQKFITNTN 214
Query: 172 AENAPIIPISALHGANIDVLVKAIEDFIPTPKRDPNKPPKMLVLRSFDVNKPGTPPEKLV 231
AE+API+P+SA NIDV+ + I IP P RD PPKM+V+RSFDVNKPG+ ++
Sbjct: 215 AEDAPIVPVSAQLKYNIDVVSEYIVKKIPIPVRDFVSPPKMIVIRSFDVNKPGSAGHEMK 274
Query: 232 GGVLGGSIVQGKLKVGDEIEIRPGVP-YEEHGRIKYEPITTEIVSLQAGGQFVEEAYPGG 290
G ++ S+ G LKV IEIRPG+ +EHG K PI + I SL A ++ A PGG
Sbjct: 275 GVLICVSLCLGVLKVNQLIEIRPGITGKDEHGNSKCTPIYSRITSLYAEQNELQFAVPGG 334
Query: 291 LVGVGTKLDPYLTKGDLMAGNVVGKPGKLPPVWDSLRLEVHLLERVVGT-----EQELKV 345
L+GVGT +DP LT+ D + G V+G+ G LP V+ L + LL R++G E+++KV
Sbjct: 335 LIGVGTTMDPTLTRADRLVGQVLGEMGTLPDVFVELEVSYQLLTRLIGVRTKEKEKQMKV 394
Query: 346 EPIKRKEVLLLNVGTARTMGLVTGLGKDEIEVKLQIPVCAEPGDRVAISRQIGSRWRLIG 405
+ ++E+L++N+G+ T V G+ KD ++++L PVC G++VA+SR++ WRLIG
Sbjct: 395 SKLTKEEILMVNIGSMSTGAKVIGVKKDMVKLQLTSPVCTTIGEKVALSRRVDRHWRLIG 454
Query: 406 YGII 409
G I
Sbjct: 455 KGQI 458
>emb|CAB98196.1| (AJ290961) heterochromatin protein [Clytus arietis]
Length = 947
Score = 320 bits (812), Expect = 2e-86
Identities = 180/423 (42%), Positives = 258/423 (60%), Gaps = 22/423 (5%)
Query: 8 RQAEVNIGMVGHVDHGKTTLTKALTGVWTDTHSEELRRGITIKIGFADAEIRRCPNC--- 64
R EV + ++D T + + T ++ ++ G I +A+A+I +C N
Sbjct: 515 RDEEVTFDYMMNIDPVVPTTPEKSRFLHTPDKNQVIQNGRNIC--YANAKIYKCDNAKCP 572
Query: 65 --GRYSTSP---------VCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMDGAIL 113
G Y + + P C + VR VSF+D PGH+ LM TML GA++MD A+L
Sbjct: 573 RPGCYISGSSSKDDNFPCLRPACSGRFQLVRHVSFVDCPGHDILMATMLNGAAVMDAALL 632
Query: 114 VIAANEPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALENYRQIKEFIEGTVAE 173
+IA NE CP+PQT EHL A++I+ K+III QNKI+LV + +A E + QI +F++GTVAE
Sbjct: 633 LIAGNESCPQPQTSEHLAAIEIMKLKHIIILQNKIDLVKEGQAKEQHEQIVKFVQGTVAE 692
Query: 174 NAPIIPISALHGANIDVLVKAIEDFIPTPKRDPNKPPKMLVLRSFDVNKPGTPPEKLVGG 233
APIIPISA NI+VL + I IP P RD P+++V+RSFDVNKPG L GG
Sbjct: 693 GAPIIPISAQLKYNIEVLCEYITKKIPIPVRDFTSEPRLIVIRSFDVNKPGCEVNDLKGG 752
Query: 234 VLGGSIVQGKLKVGDEIEIRPG-VPYEEHGRIKYEPITTEIVSLQAGGQFVEEAYPGGLV 292
V GGSI++G LKVG EIE+RPG V + G++ PI + IVSL ++ A PGGL+
Sbjct: 753 VAGGSILRGVLKVGQEIEVRPGLVSKDAEGKLTCRPIFSRIVSLYTEQNELQFAVPGGLI 812
Query: 293 GVGTKLDPYLTKGDLMAGNVVGKPGKLPPVWDSLRLEVHLLERVVGTEQE-----LKVEP 347
GVGTK++P L + D + G V+G G LP ++ L + +LL+R++G E KV+
Sbjct: 813 GVGTKIEPTLCRADRLVGQVLGAVGALPSIFIELEVSYYLLKRLLGVRMEGDKKGAKVQR 872
Query: 348 IKRKEVLLLNVGTARTMGLVTGLGKDEIEVKLQIPVCAEPGDRVAISRQIGSRWRLIGYG 407
+ + EVLL+N+G+ T G V D ++ L PVC E G+++A+SR++ WRLIG+G
Sbjct: 873 LSKSEVLLVNIGSLSTGGRVVATKADLCKIALTNPVCTEIGEKIALSRRVEKHWRLIGWG 932
Query: 408 IIK 410
I+
Sbjct: 933 QIR 935
>emb|CAB94835.1| (AJ290965) heterochromatin protein [Leptinotarsa decemlineata]
Length = 955
Score = 313 bits (794), Expect = 2e-84
Identities = 173/382 (45%), Positives = 239/382 (62%), Gaps = 28/382 (7%)
Query: 53 FADAEIRRC--PNCGRYSTSPVC----------------PYCGHETEFVRRVSFIDAPGH 94
+A+A+I C P C R PVC C + VR VSF+D PGH
Sbjct: 568 YANAKIYHCDNPKCPR----PVCFTSGSSSKDDNFPCTRQSCTGRFQLVRHVSFVDCPGH 623
Query: 95 EALMTTMLAGASLMDGAILVIAANEPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKE 154
+ LM TML GA++MD A+L+IA NE CP+PQT EHL A++I+ K+III QNKI+LV +
Sbjct: 624 DILMATMLNGAAVMDAALLLIAGNESCPQPQTSEHLAAIEIMKLKHIIILQNKIDLVKEG 683
Query: 155 KALENYRQIKEFIEGTVAENAPIIPISALHGANIDVLVKAIEDFIPTPKRDPNKPPKMLV 214
+A E QI +F++GTVAE APIIPISA N +VL + I IP P RD P+++V
Sbjct: 684 QAKEQQEQIVKFVQGTVAEGAPIIPISAQLKYNTEVLCEYIIKKIPVPLRDFTSEPRLIV 743
Query: 215 LRSFDVNKPGTPPEKLVGGVLGGSIVQGKLKVGDEIEIRPG-VPYEEHGRIKYEPITTEI 273
+RSFDVNKPG L GGV GGSI++G L+VG EIE+RPG V + G++ PI + I
Sbjct: 744 IRSFDVNKPGCEVNDLKGGVAGGSILRGVLRVGQEIEVRPGLVSKDPEGKLTCRPIFSRI 803
Query: 274 VSLQAGGQFVEEAYPGGLVGVGTKLDPYLTKGDLMAGNVVGKPGKLPPVWDSLRLEVHLL 333
VSL A ++ A PGGL+GVGTK++P L + D + G V+G G LP ++ L + +LL
Sbjct: 804 VSLFAEQNELQFAVPGGLIGVGTKIEPTLCRADRLVGQVLGAVGALPSIFIELEVSYYLL 863
Query: 334 ERVVGTEQE-----LKVEPIKRKEVLLLNVGTARTMGLVTGLGKDEIEVKLQIPVCAEPG 388
+R++G E KV+ + + EVLL+N+G+ T G V D ++ L PVC E G
Sbjct: 864 KRLLGVRTEGDKKGAKVQRLTKSEVLLVNIGSLSTGGRVAATKADLCKIALTNPVCTEVG 923
Query: 389 DRVAISRQIGSRWRLIGYGIIK 410
+++A+SR++ WRLIG+G I+
Sbjct: 924 EKIALSRRVEKHWRLIGWGHIR 945
>emb|CAA09448.1| (AJ010980) translation initiation factor 2 gamma [Dictyostelium
discoideum]
Length = 325
Score = 300 bits (761), Expect = 2e-80
Identities = 152/317 (47%), Positives = 222/317 (69%), Gaps = 5/317 (1%)
Query: 100 TMLAGASLMDGAILVIAANEPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALEN 159
TML GA++MD A+L+IA NE CP+PQT EH+ A++I+ KNIII QNKI++V + A E
Sbjct: 4 TMLNGAAVMDAALLLIAGNESCPQPQTSEHIAAIEIMNLKNIIILQNKIDMVKEAAAQEQ 63
Query: 160 YRQIKEFIEGTVAENAPIIPISALHGANIDVLVKAIEDFIPTPKRDPNKPPKMLVLRSFD 219
Y QI +FI+GT+AENAPIIPISA NIDV+ + I IP P RD P+M+ +RSFD
Sbjct: 64 YGQILKFIQGTIAENAPIIPISAQMKYNIDVICEYIVKKIPIPVRDFTSDPRMIDIRSFD 123
Query: 220 VNKPGTPPEKLVGGVLGGSIVQGKLKVGDEIEIRPGVPYEE-HGRIKYEPITTEIVSLQA 278
VNKPG+ +++ GGV GGSI++G LK+GDEIE+RPGV +E G+IK PI + I+SL A
Sbjct: 124 VNKPGSRVDEIKGGVAGGSILKGALKIGDEIEVRPGVISKELDGKIKCSPIFSRIISLFA 183
Query: 279 GGQFVEEAYPGGLVGVGTKLDPYLTKGDLMAGNVVGKPGKLPPVWDSLRLEVHLLERVVG 338
++ A PGGL+GVGTK+DP L + D + G V+G GKLP ++ +L + LL R++G
Sbjct: 184 EENELQYAVPGGLIGVGTKIDPTLCRADRLVGQVLGSVGKLPEIFVALEVNFFLLRRLLG 243
Query: 339 T----EQELKVEPIKRKEVLLLNVGTARTMGLVTGLGKDEIEVKLQIPVCAEPGDRVAIS 394
+ + KV+ + +++ L++N+G+ T V + D +++L PVC++ G+++A+S
Sbjct: 244 VKSDGDNQSKVKKLSKEDTLMVNIGSTSTGCRVVAVKHDLAKLQLLTPVCSQEGEKIALS 303
Query: 395 RQIGSRWRLIGYGIIKE 411
R++ WRLIG+G IK+
Sbjct: 304 RRVDKNWRLIGWGEIKK 320
>emb|CAA07331.1| (AJ006932) retropseudogene [Homo sapiens]
Length = 248
Score = 217 bits (547), Expect = 2e-55
Identities = 118/240 (49%), Positives = 155/240 (64%), Gaps = 14/240 (5%)
Query: 31 LTGVWTDTHSEELRRGITIKIGFADAEIRRC--PNCGRYSTSPVC------------PYC 76
++GV T EL R ITIK+G+A+A+I + P+C R C P
Sbjct: 1 ISGVHTVRFKNELERNITIKLGYANAKIYQLDDPSCPRPECYRSCGSSMPDEFPTDIPGT 60
Query: 77 GHETEFVRRVSFIDAPGHEALMTTMLAGASLMDGAILVIAANEPCPRPQTREHLMALQII 136
VR VSF+D PGH+ LM TML GA++MD A+L+IA NE CP+PQT EHL A++I+
Sbjct: 61 KGNFRLVRHVSFVDCPGHDILMATMLNGAAVMDAALLLIAGNESCPQPQTSEHLAAIEIM 120
Query: 137 GQKNIIIAQNKIELVDKEKALENYRQIKEFIEGTVAENAPIIPISALHGANIDVLVKAIE 196
K+I+I QNKI+LV + +A E Y QI F++GTVAE APIIPISA NI+V+ + I
Sbjct: 121 KLKHILILQNKIDLVKERQAKEQYEQILAFVQGTVAEGAPIIPISAQLKYNIEVVCEYIV 180
Query: 197 DFIPTPKRDPNKPPKMLVLRSFDVNKPGTPPEKLVGGVLGGSIVQGKLKVGDEIEIRPGV 256
IP P RD P+++ +RSFDVNKPG + L GGV GGSI++G LKVG E E+RPG+
Sbjct: 181 KKIPVPPRDFTSEPRLIGIRSFDVNKPGCEVDDLKGGVTGGSILKGVLKVGHETEVRPGL 240
>gb|AAD04235.1| (AF005077) translation initiation factor 2 gamma subunit
[Monocercomonas ATCC50210]
Length = 211
Score = 207 bits (522), Expect = 2e-52
Identities = 103/211 (48%), Positives = 147/211 (68%), Gaps = 10/211 (4%)
Query: 17 VGHVDHGKTTLTKALTGVWTDTHSEELRRGITIKIGFADAEIRRCPNC-------GRYST 69
+GHV HGK+T+ +A++GV T +EL R ITI++G+A+A+I +CP C + ST
Sbjct: 1 IGHVAHGKSTVVRAISGVTTIKWKKELERNITIRLGYANAKIYQCPKCPSPDCFISKPST 60
Query: 70 ---SPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMDGAILVIAANEPCPRPQT 126
+P CP C + VR +SF+D PGH+ LM TML G ++MD A+L+IAANE CP+PQT
Sbjct: 61 VIENPTCPKCSSPIDLVRHISFVDCPGHDVLMATMLNGTAVMDSALLLIAANETCPQPQT 120
Query: 127 REHLMALQIIGQKNIIIAQNKIELVDKEKALENYRQIKEFIEGTVAENAPIIPISALHGA 186
EHL A+QI+ +N+II QNKI+LV +E+A ++Y I ++I TVA+ AP+IPISA G
Sbjct: 121 SEHLAAVQIMNLRNLIILQNKIDLVRQEEAQDHYTAILKYISTTVAKGAPVIPISAQLGY 180
Query: 187 NIDVLVKAIEDFIPTPKRDPNKPPKMLVLRS 217
NI+ +V+ I IP P RD + P+M+V+RS
Sbjct: 181 NINYVVEHIVKNIPVPPRDYSASPRMIVIRS 211
>gb|AAD04233.1| (AF005075) translation initiation factor 2 gamma subunit
[Trichomonas vaginalis]
Length = 211
Score = 192 bits (482), Expect = 8e-48
Identities = 95/211 (45%), Positives = 137/211 (64%), Gaps = 10/211 (4%)
Query: 17 VGHVDHGKTTLTKALTGVWTDTHSEELRRGITIKIGFADAEIRRCPNC----------GR 66
+GHV HGK+T+ A++G T +EL R ITI++G+A+A+I +CP C
Sbjct: 1 IGHVAHGKSTVVYAISGESTIRWKKELERNITIRLGYANAKIYKCPQCPAPQCYISRNSE 60
Query: 67 YSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMDGAILVIAANEPCPRPQT 126
T P CP+C E +R VSF+D PGH+ LM TML G ++MD A+L+IAANE CP+PQT
Sbjct: 61 ILTDPRCPHCSSPIELIRHVSFVDCPGHDVLMATMLNGTAVMDAALLLIAANEHCPQPQT 120
Query: 127 REHLMALQIIGQKNIIIAQNKIELVDKEKALENYRQIKEFIEGTVAENAPIIPISALHGA 186
EHL A++I+ K+III QNKI+LV +++A + Y+ I ++ T A +P+IPISA
Sbjct: 121 CEHLAAVEIMNLKHIIILQNKIDLVRQDEAADQYQAILKYTATTAARGSPVIPISAQLTF 180
Query: 187 NIDVLVKAIEDFIPTPKRDPNKPPKMLVLRS 217
+D V+ I + IP P RD + +M+V+RS
Sbjct: 181 GVDAAVERIVETIPIPVRDYSASARMVVIRS 211
>gb|AAD04234.1| (AF005076) translation initiation factor 2 gamma subunit [Nosema
locustae]
Length = 215
Score = 187 bits (471), Expect = 2e-46
Identities = 92/215 (42%), Positives = 137/215 (62%), Gaps = 14/215 (6%)
Query: 17 VGHVDHGKTTLTKALTGVWTDTHSEELRRGITIKIGFADAEI-----RRCPNCGRYST-- 69
+GHV HGK+TL A++GV T EL + ITIK+G+A+ +I CP GRY +
Sbjct: 1 IGHVAHGKSTLVNAISGVRTVRFKSELEKNITIKLGYANTKIYACDSEECPRPGRYRSFK 60
Query: 70 -----SPVCPY--CGHETEFVRRVSFIDAPGHEALMTTMLAGASLMDGAILVIAANEPCP 122
CP C V+ VSF+D PGH+ LM+TM+ G ++MD AIL++AANEPCP
Sbjct: 61 SSAKDGKKCPRHGCTGRLWLVKHVSFVDCPGHDVLMSTMINGTAIMDSAILLVAANEPCP 120
Query: 123 RPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALENYRQIKEFIEGTVAENAPIIPISA 182
+PQT+EHL AL+ +II+ QNKI+L+ +E+ L +++EF+ T A N+PI+P+S
Sbjct: 121 QPQTQEHLFALERTDISHIIVVQNKIDLISRERCLNQRDRVQEFLARTKACNSPIVPVSG 180
Query: 183 LHGANIDVLVKAIEDFIPTPKRDPNKPPKMLVLRS 217
+ N+D ++ I ++IP RD PP+M+++RS
Sbjct: 181 QYKINVDAVIDLIVNYIPQTVRDTGAPPRMVIIRS 215
>gb|AAD04236.1| (AF005078) translation initiation factor 2 gamma subunit [Giardia
intestinalis]
Length = 215
Score = 181 bits (454), Expect = 2e-44
Identities = 93/215 (43%), Positives = 137/215 (63%), Gaps = 14/215 (6%)
Query: 17 VGHVDHGKTTLTKALTGVWTDTHSEELRRGITIKIGFADAEIRRCPNCGR----YSTSPV 72
+GHV HGK+TL KA+TG+ T E+ R ITIK+G+A+A+I +CP C + TS
Sbjct: 1 IGHVAHGKSTLVKAITGITTGRFHSEMERNITIKLGYANAKIFKCPKCPEPHNYFPTSSS 60
Query: 73 ------CPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMDGAILVIAANEPCPRPQT 126
C CG VR +SF+D PGH+ M TML GA +MD A+L+IAA +PCP+ QT
Sbjct: 61 MPDNSKCKMCGSVGTLVRHISFVDCPGHDFYMATMLTGACVMDAALLLIAAEQPCPQSQT 120
Query: 127 REHLMALQIIG---QKNIIIAQNKIELVDKEKALENYRQIKEFIEGTV-AENAPIIPISA 182
+EHL A+ I G +II QNKI+L+ +++A +++QI ++ ++ +N IIP SA
Sbjct: 121 KEHLAAIDIAGITKADRVIIVQNKIDLIKEQEAKSHHQQIVNYLNISLKTKNPHIIPTSA 180
Query: 183 LHGANIDVLVKAIEDFIPTPKRDPNKPPKMLVLRS 217
+ G N+D+++ I + +P PKRD PP +V+RS
Sbjct: 181 VSGYNVDLVLHHIVNKLPIPKRDLTLPPLFMVIRS 215
>sp|O36041|IF2G_SPIVO EUKARYOTIC TRANSLATION INITIATION FACTOR 2 GAMMA SUBUNIT
(EIF-2-GAMMA) >gi|2522346|gb|AAB81022.1| (U94408)
translation initiation factor-2 gamma subunit
[Spironucleus vortens]
Length = 210
Score = 179 bits (450), Expect = 4e-44
Identities = 95/212 (44%), Positives = 135/212 (62%), Gaps = 13/212 (6%)
Query: 17 VGHVDHGKTTLTKALTGVWTDTHSEELRRGITIKIGFADAEIRRCPNCG-------RYST 69
+GHV HGK+TL K LTGV + E ITIK+GFA+A+I C +C + S+
Sbjct: 1 IGHVAHGKSTLCKVLTGVDPIKFAAEKVNNITIKLGFANAKIFECKDCAAPKNYFSQKSS 60
Query: 70 SP---VCPYC-GHETEFVRRVSFIDAPGHEALMTTMLAGASLMDGAILVIAANEPCPRPQ 125
SP CP C G T+ +R +S ID PGH MTTML+G + MDG +L+I+A + CP+ Q
Sbjct: 61 SPDQPPCPTCKGTHTQLLRHISIIDCPGHHDYMTTMLSGVAAMDGTLLLISAEQRCPQEQ 120
Query: 126 TREHLMALQIIGQKNIIIAQNKIELVDKEKALENYRQIKEFIEGTVAENAPIIPISALHG 185
TREH A+Q GQK IIIAQNKI+LV +++A NY++I+ F+ G N ++PISA+
Sbjct: 121 TREHFQAIQATGQKKIIIAQNKIDLVTEQQAQNNYQEIQAFVHGISDIN--VVPISAIQN 178
Query: 186 ANIDVLVKAIEDFIPTPKRDPNKPPKMLVLRS 217
NID ++K + + I P+R+ P+ ++RS
Sbjct: 179 LNIDYILKHLVETITPPRRNLKAHPRFTIIRS 210
>sp|Q46455|SELB_MOOTH SELENOCYSTEINE-SPECIFIC ELONGATION FACTOR (SELB TRANSLATION FACTOR)
>gi|1483309|emb|CAA68147.1| (X99830) elongation factor
[Moorella thermoacetica] >gi|2465115|emb|CAA75097.1|
(Y14814) elongation factor SelB [Moorella thermoacetica]
Length = 634
Score = 152 bits (380), Expect = 7e-36
Identities = 129/405 (31%), Positives = 192/405 (46%), Gaps = 67/405 (16%)
Query: 14 IGMVGHVDHGKTTLTKALTGVWTDTHSEELRRGITIKIGFADAEIRRCPNCGRYSTSPVC 73
+G GHVDHGKT L KALTGV TD EE RGI+I++GFA P+
Sbjct: 6 VGTAGHVDHGKTVLVKALTGVDTDRLKEEKERGISIELGFA----------------PLT 49
Query: 74 PYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMDGAILVIAANEPCPRPQTREHLMAL 133
G R++ +D PGHE + MLAG MD +LV+AA+E PQTREHL +
Sbjct: 50 LPSG------RQLGLVDVPGHERFIRQMLAGVGGMDLVMLVVAADEGV-MPQTREHLAII 102
Query: 134 QIIGQKNIIIAQNKIELVDKEKALENYRQIKEFIEGTVAENAPIIPISALHGANIDVLVK 193
++ K II KI+LV+ + ++++ ++GTV E+AP++ +SAL G I L +
Sbjct: 103 DLLQIKKGIIVITKIDLVEADWLELVREEVRQAVKGTVLEDAPLVEVSALTGEGIAELRE 162
Query: 194 AIEDFIP-TPKRDPNKPPKMLVLRSFDVNKPGTPPEKLVGGVLGGSIVQGKLKVGDEIEI 252
++ TP R ++ + R F V GT V+ G++ G +KVGDE+E+
Sbjct: 163 QLDALAAVTPPRPAAGRVRLPIDRVFSVTGFGT--------VVTGTLWSGTIKVGDELEV 214
Query: 253 RPGVPYEEHGRIKYEPITTEIVSLQAGGQFVEEAYPGGLVGVGTKLDPYLTKGDLMAGNV 312
+P E + T +LQ G+ V+EA G V V + + G+
Sbjct: 215 QP------------EGLKTRARNLQVHGRTVKEARAGQRVAVNL---AGIETEAVHRGSS 259
Query: 313 VGKPGKLPPVWDSLRLEVHLLERVVGTEQELKVEPIKRKEVLLLNVGTARTMGLVTGLGK 372
+ PG L P + L LL P+ ++ + +GT+ +G V L +
Sbjct: 260 LLTPGFLTPTY-RLDASFKLLN---------GARPLANRDRVHFYLGTSEALGRVVLLDR 309
Query: 373 DE--------IEVKLQIPVCAEPGDRVAISRQIGSRWRLIGYGII 409
DE I++ ++ PV A DR + S IG GII
Sbjct: 310 DELNGGEEALIQLLMEKPVVASREDRFILRSY--SPMETIGGGII 352
>sp|P42471|EFTU_BRELN ELONGATION FACTOR TU (EF-TU) >gi|2147347|pir||I40216 translation
elongation factor EF-Tu - Brevibacterium linens
>gi|560805|emb|CAA54192.1| (X76863) elongation factor Tu
[Brevibacterium linens]
Length = 397
Score = 146 bits (364), Expect = 5e-34
Identities = 114/356 (32%), Positives = 175/356 (49%), Gaps = 77/356 (21%)
Query: 12 VNIGMVGHVDHGKTTLTKALTGVWTDTH---------------SEELRRGITIKIGFADA 56
VNIG +GHVDHGKTTLT A+T V D + EE RGITI + +
Sbjct: 13 VNIGTIGHVDHGKTTLTAAITKVLADQYPDLNEARAFDQVDNAPEEKERGITINVSHVE- 71
Query: 57 EIRRCPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMDGAILVIA 116
++TE R + +DAPGH + M+ GA+ MDGAILV+A
Sbjct: 72 ---------------------YQTE-KRHYAHVDAPGHADYVKNMITGAAQMDGAILVVA 109
Query: 117 ANEPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALENYR-QIKEFI--EGTVAE 173
A + P PQTREH++ + +G I++A NK ++VD E+ LE ++++ + + +
Sbjct: 110 ATDG-PMPQTREHVLLARQVGVPYIVVALNKSDMVDDEELLELVEFEVRDLLSSQDFDGD 168
Query: 174 NAPIIPISALHG--------ANIDVLVKAIEDFIPTPKRDPNKPPKMLVLRSFDVNKPGT 225
NAP+IP+SAL ++ L+ A++D +P P+RD +KP M V F + GT
Sbjct: 169 NAPVIPVSALKALEGDEKWVKSVQDLMAAVDDNVPEPERDVDKPFLMPVEDVFTITGRGT 228
Query: 226 PPEKLVGGVLGGSIVQGKLKVGDEIEIRPGVPYEEHGRIKYEPITTEIVSLQAGGQFVEE 285
V+ G + +G L DEIEI IK + T + +++ + + +
Sbjct: 229 --------VVTGRVERGVLLPNDEIEI---------VGIKEKSSKTTVTAIEMFRKTLPD 271
Query: 286 AYPGGLVGV---GTKLDPYLTKGDLMAGNVVGKPGKLPPVWDSLRLEVHLLERVVG 338
A G VG+ GTK + D+ G V+ KPG + P +V++L + G
Sbjct: 272 ARAGENVGLLLRGTK------REDVERGQVIVKPGSITP-HTKFEAQVYILSKDEG 320
>sp|O50293|EFTU_AQUPY ELONGATION FACTOR TU (EF-TU) >gi|2687828|emb|CAA75781.1| (Y15787)
elongation factor Tu [Aquifex pyrophilus]
Length = 405
Score = 146 bits (364), Expect = 5e-34
Identities = 130/446 (29%), Positives = 207/446 (46%), Gaps = 88/446 (19%)
Query: 3 EKRKSRQAEVNIGMVGHVDHGKTTLTKALTGVWT-----------------DTHSEELRR 45
EK + + VN+G +GHVDHGK+TLT A+T V D EE R
Sbjct: 4 EKFERTKEHVNVGTIGHVDHGKSTLTSAITCVLAAGLVEGGKAKCFKYEEIDKAPEEKER 63
Query: 46 GITIKIGFADAEIRRCPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGA 105
GITI I + E + R + +D PGH + M+ GA
Sbjct: 64 GITINITHVEYETAK-----------------------RHYAHVDCPGHADYIKNMITGA 100
Query: 106 SLMDGAILVIAANEPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALENYR-QIK 164
+ MDGAILV++A + P PQTREH++ + + I++ NK ++VD E+ LE +++
Sbjct: 101 AQMDGAILVVSAADG-PMPQTREHVLLARQVNVPYIVVFMNKCDMVDDEELLELVELEVR 159
Query: 165 EFIE--GTVAENAPIIPISALHG-------------ANIDVLVKAIEDFIPTPKRDPNKP 209
E + + P+I SAL +I L+ A++++IPTP+R+ +KP
Sbjct: 160 ELLSKYEYPGDEVPVIRGSALGALQELEQNSPGKWVGSIKELLNAMDEYIPTPEREVDKP 219
Query: 210 PKMLVLRSFDVNKPGTPPEKLVGGVLGGSIVQGKLKVGDEIEIRPGVPYEEHGRIKYEPI 269
M + F ++ GT V+ G + +G L+ GDE+EI ++ EP+
Sbjct: 220 FLMPIEDVFSISGRGT--------VVTGRVERGVLRPGDEVEI---------VGLREEPL 262
Query: 270 TTEIVSLQAGGQFVEEAYPGGLVGVGTKLDPYLTKGDLMAGNVVGKPGKLPPVWDSLRLE 329
T S++ + ++EA PG +GV L + K D+ G V+ +PG + R +
Sbjct: 263 KTVATSIEMFRKVLDEALPGDNIGV---LLRGVGKDDVERGQVLAQPGSV-KAHRKFRAQ 318
Query: 330 VHLLERVVG---TEQELKVEP---IKRKEVLLLNVGTARTMGLVTGLGKDEIEVKLQIPV 383
V++L + G T + P + +V V + +V E+EV+L PV
Sbjct: 319 VYVLSKEEGGRHTPFFVNYRPQFYFRTADVTGTVVKLPEGVEMVMPGDNVELEVELIAPV 378
Query: 384 CAEPGDRVAISRQIGSRWRLIGYGII 409
E G R AI R+ G R +G G++
Sbjct: 379 ALEEGLRFAI-REGG---RTVGAGVV 400
>sp|O66429|EFTU_AQUAE ELONGATION FACTOR TU (EF-TU) >gi|7443392|pir||B70300 translation
elongation factor EF-Tu - Aquifex aeolicus
>gi|2982777|gb|AAC06403.1| (AE000669) elongation factor
EF-Tu [Aquifex aeolicus]
Length = 405
Score = 145 bits (363), Expect = 7e-34
Identities = 130/446 (29%), Positives = 207/446 (46%), Gaps = 88/446 (19%)
Query: 3 EKRKSRQAEVNIGMVGHVDHGKTTLTKALTGVWT-----------------DTHSEELRR 45
EK + + VN+G +GHVDHGK+TLT A+T V D EE R
Sbjct: 4 EKFERTKEHVNVGTIGHVDHGKSTLTSAITCVLAAGLVEGGKAKCFKYEEIDKAPEEKER 63
Query: 46 GITIKIGFADAEIRRCPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGA 105
GITI I + E + R + +D PGH + M+ GA
Sbjct: 64 GITINITHVEYETAK-----------------------RHYAHVDCPGHADYIKNMITGA 100
Query: 106 SLMDGAILVIAANEPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALENYR-QIK 164
+ MDGAILV++A + P PQTREH++ + + I++ NK ++VD E+ LE +++
Sbjct: 101 AQMDGAILVVSAADG-PMPQTREHVLLARQVNVPYIVVFMNKCDMVDDEELLELVELEVR 159
Query: 165 EFIE--GTVAENAPIIPISALHG-------------ANIDVLVKAIEDFIPTPKRDPNKP 209
E + + P+I SAL +I L+ A++++IPTP+R+ +KP
Sbjct: 160 ELLSKYEYPGDEVPVIRGSALGALQELEQNSPGKWVESIKELLNAMDEYIPTPQREVDKP 219
Query: 210 PKMLVLRSFDVNKPGTPPEKLVGGVLGGSIVQGKLKVGDEIEIRPGVPYEEHGRIKYEPI 269
M + F ++ GT V+ G + +G L+ GDE+EI ++ EP+
Sbjct: 220 FLMPIEDVFSISGRGT--------VVTGRVERGVLRPGDEVEI---------VGLREEPL 262
Query: 270 TTEIVSLQAGGQFVEEAYPGGLVGVGTKLDPYLTKGDLMAGNVVGKPGKLPPVWDSLRLE 329
T S++ + ++EA PG +GV L + K D+ G V+ +PG + R +
Sbjct: 263 KTVATSIEMFRKVLDEALPGDNIGV---LLRGVGKDDVERGQVLAQPGSV-KAHKRFRAQ 318
Query: 330 VHLLERVVG---TEQELKVEP---IKRKEVLLLNVGTARTMGLVTGLGKDEIEVKLQIPV 383
V++L + G T + P + +V V + +V E+EV+L PV
Sbjct: 319 VYVLSKEEGGRHTPFFVNYRPQFYFRTADVTGTVVKLPEGVEMVMPGDNVELEVELIAPV 378
Query: 384 CAEPGDRVAISRQIGSRWRLIGYGII 409
E G R AI R+ G R +G G++
Sbjct: 379 ALEEGLRFAI-REGG---RTVGAGVV 400
>sp|P40174|EFT1_STRCO ELONGATION FACTOR TU-1 (EF-TU-1) >gi|1076069|pir||S50138
translation elongation factor EF-Tu.1 - Streptomyces
coelicolor >gi|581641|emb|CAA54329.1| (X77039) EFTu-1
[Streptomyces coelicolor A3(2)]
>gi|7288058|emb|CAB81853.1| (AL161691) elongation factor
TU-1 [Streptomyces coelicolor A3(2)]
Length = 397
Score = 144 bits (359), Expect = 2e-33
Identities = 103/329 (31%), Positives = 170/329 (51%), Gaps = 40/329 (12%)
Query: 4 KRKSRQAEVNIGMVGHVDHGKTTLTKALTGVWTDTHSEELRRGITIKIGFADAEIRRCPN 63
K + + VNIG +GH+DHGKTTLT A+T V D + + I A +I + P
Sbjct: 5 KFERTKPHVNIGTIGHIDHGKTTLTAAITKVLHDAYPD-------INEASAFDQIDKAPE 57
Query: 64 CGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMDGAILVIAANEPCPR 123
+ + + ++TE R + +D PGH + M+ GA+ MDGAILV+AA + P
Sbjct: 58 ERQRGITISIAHVEYQTE-ARHYAHVDCPGHADYIKNMITGAAQMDGAILVVAATDG-PM 115
Query: 124 PQTREHLMALQIIGQKNIIIAQNKIELVDKEKALENYR-QIKEFIE--GTVAENAPIIPI 180
PQT+EH++ + +G I++A NK ++VD E+ LE +++E + ++ P++ +
Sbjct: 116 PQTKEHVLLARQVGVPYIVVALNKADMVDDEEILELVELEVRELLSEYEFPGDDVPVVKV 175
Query: 181 SALH--------GANIDVLVKAIEDFIPTPKRDPNKPPKMLVLRSFDVNKPGTPPEKLVG 232
SAL G ++ L+KA+++ IP P+RD +KP M + F + GT
Sbjct: 176 SALKALEGDKEWGNSVLELMKAVDEAIPEPERDVDKPFLMPIEDVFTITGRGT------- 228
Query: 233 GVLGGSIVQGKLKVGDEIEIRPGVPYEEHGRIKYEPITTEIVSLQAGGQFVEEAYPGGLV 292
V+ G I +G LKV + ++I IK E TT + ++ + ++E G V
Sbjct: 229 -VVTGRIERGVLKVNETVDII---------GIKTEKTTTTVTGIEMFRKLLDEGQAGENV 278
Query: 293 GVGTKLDPYLTKGDLMAGNVVGKPGKLPP 321
G+ L + + D+ G V+ KPG + P
Sbjct: 279 GL---LLRGIKREDVERGQVIIKPGSVTP 304
>prf||2021268A elongation factor [Streptomyces coelicolor]
Length = 397
Score = 144 bits (359), Expect = 2e-33
Identities = 103/329 (31%), Positives = 170/329 (51%), Gaps = 40/329 (12%)
Query: 4 KRKSRQAEVNIGMVGHVDHGKTTLTKALTGVWTDTHSEELRRGITIKIGFADAEIRRCPN 63
K + + VNIG +GH+DHGKTTLT A+T V D + + I A +I + P
Sbjct: 5 KFERTKPHVNIGTIGHIDHGKTTLTAAITKVLHDAYPD-------INEASAFDQIDKAPE 57
Query: 64 CGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMDGAILVIAANEPCPR 123
+ + + ++TE R + +D PGH + M+ GA+ MDGAILV+AA + P
Sbjct: 58 ERQRGITISIAHVEYQTE-ARHYAHVDCPGHADYIKNMITGAAQMDGAILVVAATDG-PM 115
Query: 124 PQTREHLMALQIIGQKNIIIAQNKIELVDKEKALENYR-QIKEFIE--GTVAENAPIIPI 180
PQT+EH++ + +G I++A NK ++VD E+ LE +++E + ++ P++ +
Sbjct: 116 PQTKEHVLLARQVGVPYIVVALNKADMVDDEEILELVELEVRELLSEYEFPGDDVPVVKV 175
Query: 181 SALH--------GANIDVLVKAIEDFIPTPKRDPNKPPKMLVLRSFDVNKPGTPPEKLVG 232
SAL G ++ L+KA+++ IP P+RD +KP M + F + GT
Sbjct: 176 SALKALEGDKEWGNSVLELMKAVDEAIPEPERDVDKPFLMPIEDVFTITGRGT------- 228
Query: 233 GVLGGSIVQGKLKVGDEIEIRPGVPYEEHGRIKYEPITTEIVSLQAGGQFVEEAYPGGLV 292
V+ G I +G LKV + ++I IK E TT + ++ + ++E G V
Sbjct: 229 -VVTGRIERGVLKVNETVDII---------GIKTEKTTTTVTGIEMFRKLLDEGQAGENV 278
Query: 293 GVGTKLDPYLTKGDLMAGNVVGKPGKLPP 321
G+ L + + D+ G V+ KPG + P
Sbjct: 279 GL---LLRGIKREDVERGQVIIKPGSVTP 304
>sp|O33594|EFTU_STRAU ELONGATION FACTOR TU (EF-TU) >gi|2246664|gb|AAB62702.1| (AF007125)
elongation factor Tu [Streptomyces aureofaciens]
Length = 397
Score = 142 bits (355), Expect = 6e-33
Identities = 103/329 (31%), Positives = 168/329 (50%), Gaps = 40/329 (12%)
Query: 4 KRKSRQAEVNIGMVGHVDHGKTTLTKALTGVWTDTHSEELRRGITIKIGFADAEIRRCPN 63
K + + VNIG +GH+DHGKTTLT A+T V D + + + A +I + P
Sbjct: 5 KFERTKPHVNIGTIGHIDHGKTTLTAAITKVLHDKYPD-------LNAASAFDQIDKAPE 57
Query: 64 CGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMDGAILVIAANEPCPR 123
+ + + ++TE R + +D PGH + M+ GA+ MDGAILV+AA + P
Sbjct: 58 ERQRGITISIAHVEYQTE-ARHYAHVDCPGHADYIKNMITGAAQMDGAILVVAATDG-PM 115
Query: 124 PQTREHLMALQIIGQKNIIIAQNKIELVDKEKALENYR-QIKEFIE--GTVAENAPIIPI 180
PQT+EH++ + +G I++A NK ++VD E+ LE +++E + ++ P++ +
Sbjct: 116 PQTKEHVLLARQVGVPYIVVALNKADMVDDEEILELVELEVRELLSEYDFPGDDLPVVQV 175
Query: 181 SALH--------GANIDVLVKAIEDFIPTPKRDPNKPPKMLVLRSFDVNKPGTPPEKLVG 232
SAL G + L+ A+++ IPTP RD +KP M V F + GT
Sbjct: 176 SALKALEGDKEWGDKLLGLMDAVDEAIPTPPRDTDKPFLMPVEDVFTITGRGT------- 228
Query: 233 GVLGGSIVQGKLKVGDEIEIRPGVPYEEHGRIKYEPITTEIVSLQAGGQFVEEAYPGGLV 292
V+ G I +G LKV + ++I IK E TT + ++ + ++E G V
Sbjct: 229 -VVTGRIERGVLKVNETVDII---------GIKTEKTTTTVTGIEMFRKLLDEGQAGENV 278
Query: 293 GVGTKLDPYLTKGDLMAGNVVGKPGKLPP 321
G+ L + + D+ G V+ KPG + P
Sbjct: 279 GL---LLRGIKREDVERGQVIIKPGSVTP 304
>pir||G70465 translation elongation factor EF-Tu - Aquifex aeolicus
>gi|2984182|gb|AAC07714.1| (AE000763) elongation Factor
EF-Tu [Aquifex aeolicus]
Length = 405
Score = 142 bits (355), Expect = 6e-33
Identities = 128/446 (28%), Positives = 207/446 (45%), Gaps = 88/446 (19%)
Query: 3 EKRKSRQAEVNIGMVGHVDHGKTTLTKALTGVWT-----------------DTHSEELRR 45
EK + + VN+G +GHVDHGK+TLT A+T V D EE R
Sbjct: 4 EKFERTKEHVNVGTIGHVDHGKSTLTSAITCVLAAGLVEGGKAKCFKYEEIDKAPEEKER 63
Query: 46 GITIKIGFADAEIRRCPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGA 105
GITI I + E + R + +D PGH + M+ GA
Sbjct: 64 GITINITHVEYETAK-----------------------RHYAHVDCPGHADYIKNMITGA 100
Query: 106 SLMDGAILVIAANEPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALENYR-QIK 164
+ MDGAILV++A + P PQTREH++ + + I++ +K ++VD E+ LE +++
Sbjct: 101 AQMDGAILVVSAADG-PMPQTREHVLLARQVNVPYIVVFMSKCDMVDDEELLELVELEVR 159
Query: 165 EFIE--GTVAENAPIIPISALHG-------------ANIDVLVKAIEDFIPTPKRDPNKP 209
E + + P+I SAL +I L+ A++++IPTP+R+ +KP
Sbjct: 160 ELLSKYEYPGDEVPVIRGSALGALQELEQNSPGKWVESIKELLNAMDEYIPTPQREVDKP 219
Query: 210 PKMLVLRSFDVNKPGTPPEKLVGGVLGGSIVQGKLKVGDEIEIRPGVPYEEHGRIKYEPI 269
M + F ++ GT V+ G + +G L+ GDE+EI ++ EP+
Sbjct: 220 FLMPIEDVFSISGRGT--------VVTGRVERGVLRPGDEVEI---------VGLREEPL 262
Query: 270 TTEIVSLQAGGQFVEEAYPGGLVGVGTKLDPYLTKGDLMAGNVVGKPGKLPPVWDSLRLE 329
T S++ + ++EA PG +GV L + + D+ G V+ +PG + R +
Sbjct: 263 KTVATSIEMFRKVLDEALPGDNIGV---LLRGVGRDDVERGQVLAQPGSV-KAHKRFRAQ 318
Query: 330 VHLLERVVG---TEQELKVEP---IKRKEVLLLNVGTARTMGLVTGLGKDEIEVKLQIPV 383
V++L + G T + P + +V V + +V E+EV+L PV
Sbjct: 319 VYVLSKEEGGRHTPFFVNYRPQFYFRTADVTGTVVKLPEGVEMVMPGDNVELEVELIAPV 378
Query: 384 CAEPGDRVAISRQIGSRWRLIGYGII 409
E G R AI R+ G R +G G++
Sbjct: 379 ALEEGLRFAI-REGG---RTVGAGVV 400
>sp|P33170|EFTU_STROR ELONGATION FACTOR TU (EF-TU) >gi|320486|pir||F60663 translation
elongation factor EF-Tu - Streptococcus oralis
Length = 398
Score = 142 bits (354), Expect = 8e-33
Identities = 114/363 (31%), Positives = 169/363 (46%), Gaps = 72/363 (19%)
Query: 3 EKRKSRQAEVNIGMVGHVDHGKTTLTKALTGVWT----------------DTHSEELRRG 46
EK + VNIG +GHVDHGKTTLT A+T V D EE RG
Sbjct: 4 EKYDRSKPHVNIGTIGHVDHGKTTLTAAITTVLARRLPSAVNQPKDYASIDAAPEERERG 63
Query: 47 ITIKIGFADAEIRRCPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGAS 106
ITI + E + R + IDAPGH + M+ GA+
Sbjct: 64 ITINTAHVEYETEK-----------------------RHYAHIDAPGHADYVKNMITGAA 100
Query: 107 LMDGAILVIAANEPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALENYR-QIKE 165
MDGAILV+A+ + P PQTREH++ + +G K++I+ NKI+LVD E+ LE +I++
Sbjct: 101 QMDGAILVVASTDG-PMPQTREHILLSRQVGVKHLIVFMNKIDLVDDEELLELVEMEIRD 159
Query: 166 FIE--GTVAENAPIIPISALHGANID--------VLVKAIEDFIPTPKRDPNKPPKMLVL 215
+ ++ P+I SAL D L+ ++++IP P+RD KP + V
Sbjct: 160 LLSEYDFPGDDLPVIQGSALKALEGDSKYEDIIMELMNTVDEYIPEPERDTEKPLLLPVE 219
Query: 216 RSFDVNKPGTPPEKLVGGVLGGSIVQGKLKVGDEIEIRPGVPYEEHGRIKYEPITTEIVS 275
F + GT V G I +G ++V DEIEI IK E +
Sbjct: 220 DVFSITGRGT--------VASGRIDRGTVRVNDEIEI---------VGIKEETQKAVVTG 262
Query: 276 LQAGGQFVEEAYPGGLVGVGTKLDPYLTKGDLMAGNVVGKPGKLPPVWDSLRLEVHLLER 335
++ + ++E G VGV L + + ++ G V+ KPG + P + EV++L +
Sbjct: 263 VEMFRKQLDEGLAGDNVGV---LLRGVQRDEIERGQVIAKPGSINP-HTKFKGEVYILTK 318
Query: 336 VVG 338
G
Sbjct: 319 EEG 321
>sp|P42439|EFTU_CORGL ELONGATION FACTOR TU (EF-TU) >gi|560819|emb|CAA54323.1| (X77034)
elongation factor Tu [Corynebacterium glutamicum]
Length = 396
Score = 142 bits (354), Expect = 8e-33
Identities = 106/328 (32%), Positives = 166/328 (50%), Gaps = 39/328 (11%)
Query: 4 KRKSRQAEVNIGMVGHVDHGKTTLTKALTGVWTDTHSEELRRGITIKIGFADAEIRRCPN 63
K + + VNIG +GHVDHGKTT T A+T V DT+ E + FA I + P
Sbjct: 5 KFERTKPHVNIGTIGHVDHGKTTTTAAITKVLADTYPE-------LNEAFAFDSIDKAPE 57
Query: 64 CGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMDGAILVIAANEPCPR 123
+ + ++TE R + +DAPGH + M+ GA+ MDGAILV+AA + P
Sbjct: 58 EKERGITINISHVEYQTE-KRHYAHVDAPGHADYIKNMITGAAQMDGAILVVAATDG-PM 115
Query: 124 PQTREHLMALQIIGQKNIIIAQNKIELVDKEKALENYR-QIKEFI-EGTVAENAPIIPIS 181
PQTREH++ + +G I++A NK ++V+ E+ +E +++E + E E API+ IS
Sbjct: 116 PQTREHVLLARQVGVPYILVALNKCDMVEDEEIIELVEMEVRELLAEQDYDEEAPIVHIS 175
Query: 182 ALH--------GANIDVLVKAIEDFIPTPKRDPNKPPKMLVLRSFDVNKPGTPPEKLVGG 233
AL G I L++A +D IP P R+ +KP M + F + GT
Sbjct: 176 ALKALEGDEKWGKQILELMQACDDNIPDPVRETDKPFLMPIEDIFTITGRGT-------- 227
Query: 234 VLGGSIVQGKLKVGDEIEIRPGVPYEEHGRIKYEPITTEIVSLQAGGQFVEEAYPGGLVG 293
V+ G + +G L V D+++I IK + +T + ++ + ++ A G G
Sbjct: 228 VVTGRVERGTLNVNDDVDII---------GIKEKSTSTTVTGIEMFRKLLDSAEAGDNCG 278
Query: 294 VGTKLDPYLTKGDLMAGNVVGKPGKLPP 321
+ L + + D+ G V+ KPG P
Sbjct: 279 L---LLRGIKREDVERGQVIVKPGAYTP 303
>sp|P29542|EFT1_STRRA ELONGATION FACTOR TU-1 (EF-TU-1) >gi|280337|pir||S23908 translation
elongation factor EF-Tu.1 - Streptomyces ramocissimus
>gi|581731|emb|CAA47442.1| (X67057) elongation factor
Tu1 [Streptomyces ramocissimus]
Length = 397
Score = 141 bits (353), Expect = 1e-32
Identities = 106/344 (30%), Positives = 168/344 (48%), Gaps = 70/344 (20%)
Query: 4 KRKSRQAEVNIGMVGHVDHGKTTLTKALTGVWTDTH---------------SEELRRGIT 48
K + + VNIG +GH+DHGKTTLT A+T V D + EE +RGIT
Sbjct: 5 KFERTKPHVNIGTIGHIDHGKTTLTAAITKVLHDAYPDLNEATPFDNIDKAPEERQRGIT 64
Query: 49 IKIGFADAEIRRCPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLM 108
I I + ++TE R + +D PGH + M+ GA+ M
Sbjct: 65 ISIAHVE----------------------YQTE-ARHYAHVDCPGHADYIKNMITGAAQM 101
Query: 109 DGAILVIAANEPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALENYR-QIKEFI 167
DGAILV+AA + P PQT+EH++ + +G I++A NK ++VD E+ +E +++E +
Sbjct: 102 DGAILVVAATDG-PMPQTKEHVLLARQVGVPYIVVALNKADMVDDEEIMELVELEVRELL 160
Query: 168 E--GTVAENAPIIPISALHGANIDV--------LVKAIEDFIPTPKRDPNKPPKMLVLRS 217
++ P++ +SAL D L+KA+++ IP P+RD +KP M +
Sbjct: 161 SEYEFPGDDLPVVRVSALKALEGDAQWTQSVLDLMKAVDESIPEPERDVDKPFLMPIEDV 220
Query: 218 FDVNKPGTPPEKLVGGVLGGSIVQGKLKVGDEIEIRPGVPYEEHGRIKYEPITTEIVSLQ 277
F + GT V+ G I +G LKV + ++I IK E TT + ++
Sbjct: 221 FTITGRGT--------VVTGRIERGVLKVNETVDII---------GIKTEKTTTTVTGIE 263
Query: 278 AGGQFVEEAYPGGLVGVGTKLDPYLTKGDLMAGNVVGKPGKLPP 321
+ ++E G VG+ L + + D+ G V+ KPG + P
Sbjct: 264 MFRKLLDEGQAGENVGL---LLRGIKREDVERGQVIIKPGSVTP 304
>gb|AAF22608.1|AF153618_2 (AF153618) elongation factor Tu1 [Streptomyces netropsis]
Length = 397
Score = 141 bits (353), Expect = 1e-32
Identities = 110/361 (30%), Positives = 176/361 (48%), Gaps = 71/361 (19%)
Query: 4 KRKSRQAEVNIGMVGHVDHGKTTLTKALTGVWTDTH---------------SEELRRGIT 48
K + + VNIG +GH+DHGKTTLT A+T V D + EE +RGIT
Sbjct: 5 KFERTKPHVNIGTIGHIDHGKTTLTAAITKVLHDAYPDLNEASAFDQIDKAPEERQRGIT 64
Query: 49 IKIGFADAEIRRCPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLM 108
I I + ++TE R + +D PGH + M+ GA+ M
Sbjct: 65 ISIAHVE----------------------YQTE-SRHYAHVDCPGHADYIKNMITGAAQM 101
Query: 109 DGAILVIAANEPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALENYR-QIKEFI 167
DGAILV+AA + P PQT+EH++ + +G I++A NK ++VD E+ LE +++E +
Sbjct: 102 DGAILVVAATDG-PMPQTKEHVLLARQVGVPYIVVALNKADMVDDEEILELVELEVRELL 160
Query: 168 E--GTVAENAPIIPISALH--------GANIDVLVKAIEDFIPTPKRDPNKPPKMLVLRS 217
++ P++ +SAL G + L+KA+++ IP P+RD +KP M +
Sbjct: 161 SEYEFPGDDLPVVRVSALKALEGDKEWGEKLLGLMKAVDESIPQPERDVDKPFLMPIEDV 220
Query: 218 FDVNKPGTPPEKLVGGVLGGSIVQGKLKVGDEIEIRPGVPYEEHGRIKYEPITTEIVSLQ 277
F + GT V+ G I +G LKV + ++I IK E TT + ++
Sbjct: 221 FTITGRGT--------VVTGRIERGVLKVNETVDII---------GIKTEKTTTTVTGIE 263
Query: 278 AGGQFVEEAYPGGLVGVGTKLDPYLTKGDLMAGNVVGKPGKLPPVWDSLRLEVHLLERVV 337
+ ++E G VG+ L + + D+ G V+ KPG + P S + ++L +
Sbjct: 264 MFRKLLDEGQAGENVGL---LLRGIKREDVERGQVIIKPGSVTP-HTSFEAQAYILSKDE 319
Query: 338 G 338
G
Sbjct: 320 G 320
>gb|AAF22606.1|AF153617_2 (AF153617) elongation factor Tu1 [Streptomyces mobaraensis]
Length = 397
Score = 141 bits (352), Expect = 1e-32
Identities = 108/344 (31%), Positives = 168/344 (48%), Gaps = 70/344 (20%)
Query: 4 KRKSRQAEVNIGMVGHVDHGKTTLTKALTGVWTDTH---------------SEELRRGIT 48
K + + VNIG +GHVDHGKTTLT A+T V D H EE +RGIT
Sbjct: 5 KFERTKPHVNIGTIGHVDHGKTTLTAAITKVLHDAHPELNPFTPFDQIDKAPEERQRGIT 64
Query: 49 IKIGFADAEIRRCPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLM 108
I I + ++TE R + +D PGH + M+ GA+ M
Sbjct: 65 ISIAHVE----------------------YQTE-SRHYAHVDCPGHADYIKNMITGAAQM 101
Query: 109 DGAILVIAANEPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALENYR-QIKEFI 167
DGAILV+AA + P PQT+EH++ + G I++A NK ++VD E+ LE +++E +
Sbjct: 102 DGAILVVAATDG-PMPQTKEHVLLARQSGVPYIVVALNKADMVDDEEILELVELEVRELL 160
Query: 168 E--GTVAENAPIIPISALH--------GANIDVLVKAIEDFIPTPKRDPNKPPKMLVLRS 217
++AP++ +SAL G ++ L+ A+++ IP P+RD +KP M +
Sbjct: 161 NEYEFPGDDAPVVKVSALKALEGDAEWGQSVMNLMNAVDENIPQPERDVDKPFLMPIEDV 220
Query: 218 FDVNKPGTPPEKLVGGVLGGSIVQGKLKVGDEIEIRPGVPYEEHGRIKYEPITTEIVSLQ 277
F + GT V+ G I +G LKV + ++I IK E TT + ++
Sbjct: 221 FTITGRGT--------VVTGRIERGVLKVNETVDII---------GIKTEKTTTTVTGIE 263
Query: 278 AGGQFVEEAYPGGLVGVGTKLDPYLTKGDLMAGNVVGKPGKLPP 321
+ ++E G VG+ L + + D+ G + KPG + P
Sbjct: 264 MFRKLLDEGQAGENVGL---LLRGIKREDVERGQCIIKPGSVTP 304
>sp|P33166|EFTU_BACSU ELONGATION FACTOR TU (EF-TU) (P-40) >gi|320510|pir||A60663
translation elongation factor EF-Tu (tufA) - Bacillus
subtilis >gi|1644224|dbj|BAA11004.1| (D64127) elongation
factor Tu [Bacillus subtilis]
>gi|2632380|emb|CAB11889.1| (Z99104) elongation factor
Tu [Bacillus subtilis]
Length = 396
Score = 141 bits (351), Expect = 2e-32
Identities = 109/361 (30%), Positives = 174/361 (48%), Gaps = 70/361 (19%)
Query: 3 EKRKSRQAEVNIGMVGHVDHGKTTLTKALTGV--------------WTDTHSEELRRGIT 48
EK ++ NIG +GHVDHGKTTLT A+T V D EE RGIT
Sbjct: 4 EKFDRSKSHANIGTIGHVDHGKTTLTAAITTVLHKKSGKGTAMAYDQIDGAPEERERGIT 63
Query: 49 IKIGFADAEIRRCPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLM 108
I + +ETE R + +D PGH + M+ GA+ M
Sbjct: 64 ISTAHVE----------------------YETE-TRHYAHVDCPGHADYVKNMITGAAQM 100
Query: 109 DGAILVIAANEPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALENYR-QIKEFI 167
DGAILV++A + P PQTREH++ + +G I++ NK ++VD E+ LE ++++ +
Sbjct: 101 DGAILVVSAADG-PMPQTREHILLSKNVGVPYIVVFLNKCDMVDDEELLELVEMEVRDLL 159
Query: 168 E--GTVAENAPIIPISALHG--------ANIDVLVKAIEDFIPTPKRDPNKPPKMLVLRS 217
++ P++ SAL A I L+ A++++IPTP+RD KP M V
Sbjct: 160 SEYDFPGDDVPVVKGSALKALEGDAEWEAKIFELMDAVDEYIPTPERDTEKPFMMPVEDV 219
Query: 218 FDVNKPGTPPEKLVGGVLGGSIVQGKLKVGDEIEIRPGVPYEEHGRIKYEPITTEIVSLQ 277
F + GT V G + +G++KVGDE+EI + +E + T + ++
Sbjct: 220 FSITGRGT--------VATGRVERGQVKVGDEVEI---IGLQEENK------KTTVTGVE 262
Query: 278 AGGQFVEEAYPGGLVGVGTKLDPYLTKGDLMAGNVVGKPGKLPPVWDSLRLEVHLLERVV 337
+ ++ A G +G L +++ ++ G V+ KPG + P + EV++L +
Sbjct: 263 MFRKLLDYAEAGDNIGA---LLRGVSREEIQRGQVLAKPGTITP-HSKFKAEVYVLSKEE 318
Query: 338 G 338
G
Sbjct: 319 G 319
>pir||PC4060 translation elongation factor EF-Tu1 - Streptomyces collinus
(fragment) >gi|1113958|gb|AAC60496.1| (S79408)
elongation factor Tu1, EF-Tu1 [Streptomyces collinus,
BSM 40733, Peptide, 397 aa]
Length = 397
Score = 139 bits (348), Expect = 4e-32
Identities = 106/344 (30%), Positives = 169/344 (48%), Gaps = 70/344 (20%)
Query: 4 KRKSRQAEVNIGMVGHVDHGKTTLTKALTGVWTDTH---------------SEELRRGIT 48
K + + VNIG +GH+DHGKTTLT A+T V D EE +RGIT
Sbjct: 5 KFERTKPHVNIGTIGHIDHGKTTLTAAITKVLHDAFPDLNEASAFDQIDKAPEERQRGIT 64
Query: 49 IKIGFADAEIRRCPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLM 108
I I + ++TE R + +D PGH + M+ GA+ M
Sbjct: 65 ISIAHVE----------------------YQTE-TRHYAHVDCPGHADYIKNMITGAAQM 101
Query: 109 DGAILVIAANEPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALENYR-QIKEFI 167
DGAILV+AA + P PQT+EH++ + +G I++A NK ++VD E+ LE +++E +
Sbjct: 102 DGAILVVAATDG-PMPQTKEHVLLARQVGVPYIVVALNKADMVDDEEILELVELEVRELL 160
Query: 168 E--GTVAENAPIIPISALH--------GANIDVLVKAIEDFIPTPKRDPNKPPKMLVLRS 217
++ P++ +SAL G ++ L++A+++ IP P+RD +KP M +
Sbjct: 161 SEYEFPGDDLPVVRVSALKALEGDKEWGQSVLNLMQAVDENIPEPERDVDKPFLMPIEDV 220
Query: 218 FDVNKPGTPPEKLVGGVLGGSIVQGKLKVGDEIEIRPGVPYEEHGRIKYEPITTEIVSLQ 277
F + GT V+ G I +G LKV + ++I IK E TT + ++
Sbjct: 221 FTITGRGT--------VVTGRIERGVLKVNETVDII---------GIKTEKTTTTVTGIE 263
Query: 278 AGGQFVEEAYPGGLVGVGTKLDPYLTKGDLMAGNVVGKPGKLPP 321
+ ++E G VG+ L + + D+ G V+ KPG + P
Sbjct: 264 MFRKLLDEGQAGENVGL---LLRGIKREDVERGQVIIKPGSVTP 304
>sp|Q53871|EFT1_STRCU ELONGATION FACTOR TU-1 (EF-TU-1)
Length = 397
Score = 139 bits (348), Expect = 4e-32
Identities = 106/344 (30%), Positives = 169/344 (48%), Gaps = 70/344 (20%)
Query: 4 KRKSRQAEVNIGMVGHVDHGKTTLTKALTGVWTDTH---------------SEELRRGIT 48
K + + VNIG +GH+DHGKTTLT A+T V D EE +RGIT
Sbjct: 5 KFERTKPHVNIGTIGHIDHGKTTLTAAITKVLHDAFPDLNEASAFDQIDKAPEERQRGIT 64
Query: 49 IKIGFADAEIRRCPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLM 108
I I + ++TE R + +D PGH + M+ GA+ M
Sbjct: 65 ISIAHVE----------------------YQTE-TRHYAHVDCPGHADYIKNMITGAAQM 101
Query: 109 DGAILVIAANEPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALENYR-QIKEFI 167
DGAILV+AA + P PQT+EH++ + +G I++A NK ++VD E+ LE +++E +
Sbjct: 102 DGAILVVAATDG-PMPQTKEHVLLARQVGVPYIVVALNKADMVDDEEILELVELEVRELL 160
Query: 168 E--GTVAENAPIIPISALH--------GANIDVLVKAIEDFIPTPKRDPNKPPKMLVLRS 217
++ P++ +SAL G ++ L++A+++ IP P+RD +KP M +
Sbjct: 161 SEYEFPGDDLPVVRVSALKALEGDKEWGQSVLNLMQAVDENIPEPERDVDKPFLMPIEDV 220
Query: 218 FDVNKPGTPPEKLVGGVLGGSIVQGKLKVGDEIEIRPGVPYEEHGRIKYEPITTEIVSLQ 277
F + GT V+ G I +G LKV + ++I IK E TT + ++
Sbjct: 221 FTITGRGT--------VVTGRIERGVLKVNETVDII---------GIKTEKTTTTVTGIE 263
Query: 278 AGGQFVEEAYPGGLVGVGTKLDPYLTKGDLMAGNVVGKPGKLPP 321
+ ++E G VG+ L + + D+ G V+ KPG + P
Sbjct: 264 MFRKLLDEGQAGENVGL---LLRGIKREDVERGQVIIKPGSVTP 304
>pir||A48314 translation elongation factor Tu - Thermotoga maritima
>gi|552037|gb|AAA27415.1| (M27479) protein [Thermotoga
maritima] >gi|226378|prf||1509263A elongation factor Tu
[Thermotoga maritima]
Length = 400
Score = 139 bits (347), Expect = 5e-32
Identities = 122/443 (27%), Positives = 202/443 (45%), Gaps = 83/443 (18%)
Query: 3 EKRKSRQAEVNIGMVGHVDHGKTTLTKALTGVWT-------------DTHSEELRRGITI 49
EK + VN+G +GH+DHGK+TLT A+T + D EE RGITI
Sbjct: 4 EKFVRTKPHVNVGTIGHIDHGKSTLTAAITKYLSLKVLAQYIPYDQIDKAPEEKARGITI 63
Query: 50 KIGFADAEIRRCPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMD 109
I + E + R + ID PGH + M+ GA+ MD
Sbjct: 64 NITHVEYETEK-----------------------RHYAHIDCPGHADYIKNMITGAAQMD 100
Query: 110 GAILVIAANEPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALENYR-QIKEFIE 168
GAILV+AA + P PQTREH++ + + +I+ NK ++VD + ++ ++++ +
Sbjct: 101 GAILVVAATDG-PMPQTREHVLLARQVEVPYMIVFINKTDMVDDPELIDLVEMEVRDLLS 159
Query: 169 --GTVAENAPIIPISALHGAN------------IDVLVKAIEDFIPTPKRDPNKPPKMLV 214
G + P+I SAL I L+ A++++IP P+RD +KP M +
Sbjct: 160 QYGYPGDEVPVIRGSALKAVEAPNDPNHEAYKPIQELLDAMDNYIPDPQRDVDKPFLMPI 219
Query: 215 LRSFDVNKPGTPPEKLVGGVLGGSIVQGKLKVGDEIEIRPGVPYEEHGRIKYEPITTEIV 274
F + GT V+ G I +G+++ GDE+EI + YE T +
Sbjct: 220 EDVFSITGRGT--------VVTGRIERGRIRPGDEVEII---------GLSYEIKKTVVT 262
Query: 275 SLQAGGQFVEEAYPGGLVGVGTKLDPYLTKGDLMAGNVVGKPGKLPPVWDSLRLEVHLLE 334
S++ + ++E G VG L + K ++ G V+ PG + P + ++++L+
Sbjct: 263 SVEMFRKELDEGIAGDNVGC---LLRGIDKDEVERGQVLAAPGSIKP-HKRFKAQIYVLK 318
Query: 335 RVVGTEQELKVEPIKRKEVLLLNVGTARTMGLVTGL------GKDEIEVKLQIPVCAEPG 388
+ G + K + + T +GL G+ E+E++L PV E G
Sbjct: 319 KEEGGRHTPFTKGYKPQFYIRTADVTGEIVGLPEGVEMVMPGDHVEMEIELIYPVAIEKG 378
Query: 389 DRVAISRQIGSRWRLIGYGIIKE 411
R A+ R+ G R +G G++ E
Sbjct: 379 QRFAV-REGG---RTVGAGVVTE 397
>sp|P13537|EFTU_THEMA ELONGATION FACTOR TU (EF-TU) >gi|7443394|pir||G72243 translation
elongation factor EF-Tu - Thermotoga maritima (strain
MSB8) >gi|4982068|gb|AAD36569.1|AE001799_1 (AE001799)
translation elongation factor Tu [Thermotoga maritima]
Length = 400
Score = 139 bits (347), Expect = 5e-32
Identities = 122/443 (27%), Positives = 202/443 (45%), Gaps = 83/443 (18%)
Query: 3 EKRKSRQAEVNIGMVGHVDHGKTTLTKALTGVWT-------------DTHSEELRRGITI 49
EK + VN+G +GH+DHGK+TLT A+T + D EE RGITI
Sbjct: 4 EKFVRTKPHVNVGTIGHIDHGKSTLTAAITKYLSLKGLAQYIPYDQIDKAPEEKARGITI 63
Query: 50 KIGFADAEIRRCPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMD 109
I + E + R + ID PGH + M+ GA+ MD
Sbjct: 64 NITHVEYETEK-----------------------RHYAHIDCPGHADYIKNMITGAAQMD 100
Query: 110 GAILVIAANEPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALENYR-QIKEFIE 168
GAILV+AA + P PQTREH++ + + +I+ NK ++VD + ++ ++++ +
Sbjct: 101 GAILVVAATDG-PMPQTREHVLLARQVEVPYMIVFINKTDMVDDPELIDLVEMEVRDLLS 159
Query: 169 --GTVAENAPIIPISALHGAN------------IDVLVKAIEDFIPTPKRDPNKPPKMLV 214
G + P+I SAL I L+ A++++IP P+RD +KP M +
Sbjct: 160 QYGYPGDEVPVIRGSALKAVEAPNDPNHEAYKPIQELLDAMDNYIPDPQRDVDKPFLMPI 219
Query: 215 LRSFDVNKPGTPPEKLVGGVLGGSIVQGKLKVGDEIEIRPGVPYEEHGRIKYEPITTEIV 274
F + GT V+ G I +G+++ GDE+EI + YE T +
Sbjct: 220 EDVFSITGRGT--------VVTGRIERGRIRPGDEVEII---------GLSYEIKKTVVT 262
Query: 275 SLQAGGQFVEEAYPGGLVGVGTKLDPYLTKGDLMAGNVVGKPGKLPPVWDSLRLEVHLLE 334
S++ + ++E G VG L + K ++ G V+ PG + P + ++++L+
Sbjct: 263 SVEMFRKELDEGIAGDNVGC---LLRGIDKDEVERGQVLAAPGSIKP-HKRFKAQIYVLK 318
Query: 335 RVVGTEQELKVEPIKRKEVLLLNVGTARTMGLVTGL------GKDEIEVKLQIPVCAEPG 388
+ G + K + + T +GL G+ E+E++L PV E G
Sbjct: 319 KEEGGRHTPFTKGYKPQFYIRTADVTGEIVGLPEGVEMVMPGDHVEMEIELIYPVAIEKG 378
Query: 389 DRVAISRQIGSRWRLIGYGIIKE 411
R A+ R+ G R +G G++ E
Sbjct: 379 QRFAV-REGG---RTVGAGVVTE 397
>sp|P26184|EFTU_FLESI ELONGATION FACTOR TU (EF-TU) >gi|625342|pir||A54536 translation
elongation factor EF-Tu - Flexistipes sinusarabici
>gi|227969|prf||1714240A elongation factor Tu
[Flexistipes sinusarabici]
Length = 396
Score = 139 bits (346), Expect = 7e-32
Identities = 127/440 (28%), Positives = 204/440 (45%), Gaps = 81/440 (18%)
Query: 3 EKRKSRQAEVNIGMVGHVDHGKTTLTKALTGVWT-------------DTHSEELRRGITI 49
+K + ++ VN+G +GHVDHGKTTLT A+T V + D EE RGITI
Sbjct: 4 QKYERKKPHVNVGTIGHVDHGKTTLTAAMTHVLSLKGYADYIEFGNIDKAPEEKERGITI 63
Query: 50 KIGFADAEIRRCPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMD 109
+ E + R + +D PGH + M+ GA+ MD
Sbjct: 64 ATAHVEYESDK-----------------------RHYAHVDCPGHADYVKNMITGAAQMD 100
Query: 110 GAILVIAANEPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALENYR-QIKEFIE 168
GAILV++A + P PQTREH++ + +G +I++ NK ++VD E+ LE +I++ +
Sbjct: 101 GAILVVSAADG-PMPQTREHILLARQVGVPSIVVFMNKCDMVDDEELLELVELEIRDLLN 159
Query: 169 --GTVAENAPIIPISALHGAN----------IDVLVKAIEDFIPTPKRDPNKPPKMLVLR 216
++ PII SAL I L++A++D+IP P+RD +KP M +
Sbjct: 160 TYEFPGDDIPIIKGSALQALENAEDEEKTKCIWELLQAMDDYIPAPERDIDKPFLMPIED 219
Query: 217 SFDVNKPGTPPEKLVGGVLGGSIVQGKLKVGDEIEIRPGVPYEEHGRIKYEPITTEIVSL 276
F ++ GT V+ G + +GK++V DEIEI G+ + T + +
Sbjct: 220 VFSISGRGT--------VVTGRVERGKVRVQDEIEI-VGLT---------DTRKTVVTGV 261
Query: 277 QAGGQFVEEAYPGGLVGVGTKLDPYLTKGDLMAGNVVGKPGKLPPVWDSLRLEVHLLERV 336
+ + ++E G VGV L + K D+ G V+ KPG + P + E ++L +
Sbjct: 262 EMFRKILDEGEAGDNVGV---LLRGIKKDDVERGQVLAKPGSITP-HRKFKCEAYILTKE 317
Query: 337 VGTEQE-----LKVEPIKRKEVLLLNVGTARTMGLVTGLGKDEIEVKLQIPVCAEPGDRV 391
G + + R + + A + +V +V L P+ E G R
Sbjct: 318 EGGRHTPFFSGYRPQFYFRTTDVTGVITLAEGVEMVMPGDNISCDVDLIQPIAMEQGLRF 377
Query: 392 AISRQIGSRWRLIGYGIIKE 411
AI R+ G R +G G++ E
Sbjct: 378 AI-REGG---RTVGAGVVTE 393
>sp|O50306|EFTU_BACST ELONGATION FACTOR TU (EF-TU) >gi|2661392|emb|CAA03976.1| (AJ000260)
EF-Tu [Bacillus stearothermophilus]
Length = 395
Score = 139 bits (346), Expect = 7e-32
Identities = 125/441 (28%), Positives = 202/441 (45%), Gaps = 86/441 (19%)
Query: 4 KRKSRQAEVNIGMVGHVDHGKTTLTKALTGVWT-------------DTHSEELRRGITIK 50
K + + VNIG +GHVDHGKTTLT A+T V D EE RGITI
Sbjct: 5 KFERTKPHVNIGTIGHVDHGKTTLTAAITTVLAKQGKAEAKAYDQIDAAPEERERGITIS 64
Query: 51 IGFADAEIRRCPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMDG 110
+ +ETE R + +D PGH + M+ GA+ MDG
Sbjct: 65 TAHVE----------------------YETE-ARHYAHVDCPGHADYVKNMITGAAQMDG 101
Query: 111 AILVIAANEPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALENYR-QIKEFIE- 168
AILV++A + P PQTREH++ + +G I++ NK ++VD E+ LE ++++ +
Sbjct: 102 AILVVSAADG-PMPQTREHILLSRQVGVPYIVVFLNKCDMVDDEELLELVEMEVRDLLSE 160
Query: 169 -GTVAENAPIIPISALHGANID--------VLVKAIEDFIPTPKRDPNKPPKMLVLRSFD 219
+ P+I SAL D L+ A++++IPTP+R+ +KP M + F
Sbjct: 161 YDFPGDEVPVIKGSALKALEGDPKWEEKIIELMNAVDEYIPTPQREVDKPFMMPIEDVFS 220
Query: 220 VNKPGTPPEKLVGGVLGGSIVQGKLKVGDEIEIRPGVPYEEHGRIKYEPITTEIVSLQAG 279
+ GT V G + +G LKVGD +EI + EP T + ++
Sbjct: 221 ITGRGT--------VATGRVERGTLKVGDPVEII---------GLSDEPKATTVTGVEMF 263
Query: 280 GQFVEEAYPGGLVGVGTKLDPYLTKGDLMAGNVVGKPGKLPPVWDSLRLEVHLLERVVGT 339
+ +++A G +G L +++ ++ G V+ KPG + P + +V++L +
Sbjct: 264 RKLLDQAEAGDNIGA---LLRGVSRDEVERGQVLAKPGSITP-HTKFKAQVYVLTK---- 315
Query: 340 EQELKVEPIKRKEVLLLNVGTARTMGLVT-------GLGKDEIE--VKLQIPVCAEPGDR 390
E+ + P T G++T + D +E V+L P+ E G +
Sbjct: 316 EEGGRHTPFFSNYRPQFYFRTTDVTGIITLPEGVEMVMPGDNVEMTVELIAPIAIEEGTK 375
Query: 391 VAISRQIGSRWRLIGYGIIKE 411
+I R+ G R +G G + E
Sbjct: 376 FSI-REGG---RTVGAGSVSE 392
>sp|P42477|EFTU_HERAU ELONGATION FACTOR TU (EF-TU) >gi|560835|emb|CAA54196.1| (X76868)
elongation factor Tu [Herpetosiphon aurantiacus]
Length = 400
Score = 138 bits (345), Expect = 9e-32
Identities = 129/444 (29%), Positives = 204/444 (45%), Gaps = 85/444 (19%)
Query: 3 EKRKSRQAEVNIGMVGHVDHGKTTLTKALTGVWT-------------DTHSEELRRGITI 49
+K + + +NIG +GHVDHGKTTLT A+T D EE RGITI
Sbjct: 4 QKFERNKPHINIGTIGHVDHGKTTLTAAITKTMALRGRAEFRAFDQIDNAPEERARGITI 63
Query: 50 KIGFADAEIRRCPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMD 109
I + +ETE R + +D PGH + M+ GA+ MD
Sbjct: 64 SISHVE----------------------YETE-NRHYAHVDCPGHADYIKNMITGAAQMD 100
Query: 110 GAILVIAANEPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALENYR-QIKEFIE 168
GAILV++A + P PQTREH++ + +++ NK++++D + LE +++E +
Sbjct: 101 GAILVVSAPDG-PMPQTREHILLAGQVEVPAMVVFLNKVDMMDDPELLELVEMELRELLT 159
Query: 169 --GTVAENAPIIPIS---ALHGANIDV----------LVKAIEDFIPTPKRDPNKPPKML 213
G + PI+ S AL A+ D L++A++D+IPTP+R +KP M
Sbjct: 160 KYGFPGDEIPIVRGSAKGALDSASTDASQPEYQSIQELMQAVDDYIPTPERAIDKPFLMP 219
Query: 214 VLRSFDVNKPGTPPEKLVGGVLGGSIVQGKLKVGDEIEIRPGVPYEEHGRIKYEPITTEI 273
+ F + GT V+ G I +G +KVGD IEI P + TT +
Sbjct: 220 IEDVFSIKGRGT--------VVTGRIERGIVKVGDTIEIIGMGP---------DVRTTAV 262
Query: 274 VSLQAGGQFVEEAYPGGLVGVGTKLDPYLTKGDLMAGNVVGKPGKLPPVWDSLRLEVHLL 333
++ + ++E G VG L + + D+ G V+ KPG + P + EV++L
Sbjct: 263 TGVEMFKKLLDEGRAGDNVGA---LLRGIERTDVERGQVLAKPGSIKP-HTKFKAEVYVL 318
Query: 334 ERVVGTEQELKVEPIKRKEVLLLNVGTARTMGLVTGL------GKDEIEVKLQIPVCAEP 387
++ G R + + +GL G+ ++ V+L +PV E
Sbjct: 319 KKEEGGRHSPFFSGY-RPQFYVRTTDVTGAIGLPEGVEMVMPGDNIQMTVELIVPVAIEQ 377
Query: 388 GDRVAISRQIGSRWRLIGYGIIKE 411
G + AI R+ G R +G GI+ E
Sbjct: 378 GLKFAI-REGG---RTVGAGIVPE 397
>sp|P31501|EFTU_MYCTU ELONGATION FACTOR TU (EF-TU) >gi|282523|pir||A44795 translation
elongation factor EF-Tu - Mycobacterium tuberculosis
>gi|581383|emb|CAA45102.1| (X63539) elongation factor TU
[Mycobacterium tuberculosis] >gi|1806151|emb|CAB06471.1|
(Z84395) tuf [Mycobacterium tuberculosis]
Length = 396
Score = 138 bits (344), Expect = 1e-31
Identities = 108/345 (31%), Positives = 166/345 (47%), Gaps = 73/345 (21%)
Query: 4 KRKSRQAEVNIGMVGHVDHGKTTLTKALTGV---------------WTDTHSEELRRGIT 48
K + + VNIG +GHVDHGKTTLT A+T V D EE +RGIT
Sbjct: 5 KFQRTKPHVNIGTIGHVDHGKTTLTAAITKVLHDKFPDLNETKAFDQIDNAPEERQRGIT 64
Query: 49 IKIGFADAEIRRCPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLM 108
I I + Y T R + +DAPGH + M+ GA+ M
Sbjct: 65 INIAHVE-----------YQTDK------------RHYAHVDAPGHADYIKNMITGAAQM 101
Query: 109 DGAILVIAANEPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALENYR-QIKEFI 167
DGAILV+AA + P PQTREH++ + +G I++A NK + VD E+ LE +++E +
Sbjct: 102 DGAILVVAATDG-PMPQTREHVLLARQVGVPYILVALNKADAVDDEELLELVEMEVRELL 160
Query: 168 EG-TVAENAPIIPISALHG--------ANIDVLVKAIEDFIPTPKRDPNKPPKMLVLRSF 218
E+AP++ +SAL A+++ L+ A+++ IP P R+ +KP M V F
Sbjct: 161 AAQEFDEDAPVVRVSALKALEGDAKWVASVEELMNAVDESIPDPVRETDKPFLMPVEDVF 220
Query: 219 DVNKPGTPPEKLVGGVLGGSIVQGKLKVGDEIEIRPGVPYEEHGRIKYEPITTE--IVSL 276
+ GT V+ G + +G + V +E+EI + P TT+ + +
Sbjct: 221 TITGRGT--------VVTGRVERGVINVNEEVEI-----------VGIRPSTTKTTVTGV 261
Query: 277 QAGGQFVEEAYPGGLVGVGTKLDPYLTKGDLMAGNVVGKPGKLPP 321
+ + +++ G VG+ L + + D+ G VV KPG P
Sbjct: 262 EMFRKLLDQGQAGDNVGL---LLRGVKREDVERGQVVTKPGTTTP 303
>emb|CAA45101.1| (X63539) orf [Mycobacterium tuberculosis]
Length = 403
Score = 138 bits (344), Expect = 1e-31
Identities = 108/345 (31%), Positives = 166/345 (47%), Gaps = 73/345 (21%)
Query: 4 KRKSRQAEVNIGMVGHVDHGKTTLTKALTGV---------------WTDTHSEELRRGIT 48
K + + VNIG +GHVDHGKTTLT A+T V D EE +RGIT
Sbjct: 12 KFQRTKPHVNIGTIGHVDHGKTTLTAAITKVLHDKFPDLNETKAFDQIDNAPEERQRGIT 71
Query: 49 IKIGFADAEIRRCPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLM 108
I I + Y T R + +DAPGH + M+ GA+ M
Sbjct: 72 INIAHVE-----------YQTDK------------RHYAHVDAPGHADYIKNMITGAAQM 108
Query: 109 DGAILVIAANEPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALENYR-QIKEFI 167
DGAILV+AA + P PQTREH++ + +G I++A NK + VD E+ LE +++E +
Sbjct: 109 DGAILVVAATDG-PMPQTREHVLLARQVGVPYILVALNKADAVDDEELLELVEMEVRELL 167
Query: 168 EG-TVAENAPIIPISALHG--------ANIDVLVKAIEDFIPTPKRDPNKPPKMLVLRSF 218
E+AP++ +SAL A+++ L+ A+++ IP P R+ +KP M V F
Sbjct: 168 AAQEFDEDAPVVRVSALKALEGDAKWVASVEELMNAVDESIPDPVRETDKPFLMPVEDVF 227
Query: 219 DVNKPGTPPEKLVGGVLGGSIVQGKLKVGDEIEIRPGVPYEEHGRIKYEPITTE--IVSL 276
+ GT V+ G + +G + V +E+EI + P TT+ + +
Sbjct: 228 TITGRGT--------VVTGRVERGVINVNEEVEI-----------VGIRPSTTKTTVTGV 268
Query: 277 QAGGQFVEEAYPGGLVGVGTKLDPYLTKGDLMAGNVVGKPGKLPP 321
+ + +++ G VG+ L + + D+ G VV KPG P
Sbjct: 269 EMFRKLLDQGQAGDNVGL---LLRGVKREDVERGQVVTKPGTTTP 310
>sp|P95724|EFTU_STRCJ ELONGATION FACTOR TU (EF-TU) >gi|1707675|emb|CAA67349.1| (X98831)
elongation factor Tu [Streptomyces cinnamoneus]
Length = 397
Score = 137 bits (342), Expect = 2e-31
Identities = 107/344 (31%), Positives = 166/344 (48%), Gaps = 70/344 (20%)
Query: 4 KRKSRQAEVNIGMVGHVDHGKTTLTKALTGVW---------------TDTHSEELRRGIT 48
K + + VNIG +GHVDHGKTTLT A+T V D EE +RGIT
Sbjct: 5 KFERTKPHVNIGTIGHVDHGKTTLTAAITKVLHDAIPDLNPFTPFDEIDKAPEERQRGIT 64
Query: 49 IKIGFADAEIRRCPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLM 108
I I + ++TE R + +D PGH + M+ GA+ M
Sbjct: 65 ISIAHVE----------------------YQTE-SRHYAHVDCPGHADYIKNMITGAAQM 101
Query: 109 DGAILVIAANEPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALENYR-QIKEFI 167
DGAILV+AA + P PQT+EH++ + G I++A NK ++VD E+ +E +++E +
Sbjct: 102 DGAILVVAATDG-PMPQTKEHVLLARQSGVPYIVVALNKADMVDDEEIMELVELEVRELL 160
Query: 168 EGTV--AENAPIIPISALH--------GANIDVLVKAIEDFIPTPKRDPNKPPKMLVLRS 217
+N P++ +SAL G + L+KA+++ IP P+RD +KP M +
Sbjct: 161 SEYEFDGDNCPVVQVSALKALEGDKEWGEKLLGLMKAVDENIPQPERDVDKPFLMPIEDV 220
Query: 218 FDVNKPGTPPEKLVGGVLGGSIVQGKLKVGDEIEIRPGVPYEEHGRIKYEPITTEIVSLQ 277
F + GT V+ G I +G LKV + ++I IK E TT + ++
Sbjct: 221 FTITGRGT--------VVTGRIERGVLKVNETVDII---------GIKTEKTTTTVTGIE 263
Query: 278 AGGQFVEEAYPGGLVGVGTKLDPYLTKGDLMAGNVVGKPGKLPP 321
+ ++E G VG+ L + + D+ G + KPG + P
Sbjct: 264 MFRKLLDEGQAGENVGL---LLRGIKREDVERGQCIIKPGTVTP 304
>sp|P42476|EFTU_FLAFE ELONGATION FACTOR TU (EF-TU) >gi|560831|emb|CAA54195.1| (X76867)
elongation factor Tu [Flavobacterium ferrugineum]
Length = 395
Score = 137 bits (341), Expect = 3e-31
Identities = 132/442 (29%), Positives = 201/442 (44%), Gaps = 86/442 (19%)
Query: 3 EKRKSRQAEVNIGMVGHVDHGKTTLTKALTGVWT-------------DTHSEELRRGITI 49
E K + VNIG +GHVDHGKTTLT A+T + + D EE RGITI
Sbjct: 4 ETFKREKPHVNIGTIGHVDHGKTTLTAAITDILSKKGLAQAKKYDEIDGAPEEKERGITI 63
Query: 50 KIGFADAEIRRCPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMD 109
+ E R + +D PGH + M+ GA+ MD
Sbjct: 64 NTAHVEYETAN-----------------------RHYAHVDCPGHADYVKNMITGAAQMD 100
Query: 110 GAILVIAANEPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALENYR-QIKEFI- 167
GAILV+AA++ P PQT+EH++ +G +++ NK++LVD E+ LE +++E +
Sbjct: 101 GAILVVAASDG-PMPQTKEHILLAAQVGVPKMVVFLNKVDLVDDEELLELVEIEVREELT 159
Query: 168 -EGTVAENAPIIPISALHG--------ANIDVLVKAIEDFIPTPKRDPNKPPKMLVLRSF 218
G +N PII SA I+ L+ A++ +IP P R + P M V F
Sbjct: 160 KRGFDGDNTPIIKGSATGALAGEEKWVKEIENLMDAVDSYIPLPPRPVDLPFLMSVEDVF 219
Query: 219 DVNKPGTPPEKLVGGVLGGSIVQGKLKVGDEIEIRPGVPYEEHGRIKYEPITTEIVSLQA 278
+ GT V G I +G++KVG+ +EI V +E P+ + + ++
Sbjct: 220 SITGRGT--------VATGRIERGRIKVGEPVEI---VGLQE------SPLNSTVTGVEM 262
Query: 279 GGQFVEEAYPGGLVGVGTKLDPYLTKGDLMAGNVVGKPGKLPPVWDSLRLEVHLLERVVG 338
+ ++E G G+ L + K + G V+ KPG + P D + EV++L + G
Sbjct: 263 FRKLLDEGEAGDNAGL---LLRGVEKTQIRRGMVIVKPGSITPHTD-FKGEVYVLSKDEG 318
Query: 339 ---TEQELKVEP---IKRKEV---LLLNVGTARTMGLVTGLGKDEIEVKLQIPVCAEPGD 389
T K P + +V + LN GT +V + VKL P+ E G
Sbjct: 319 GRHTPFFNKYRPQFYFRTTDVTGEVELNAGTE----MVMPGDNTNLTVKLIQPIAMEKGL 374
Query: 390 RVAISRQIGSRWRLIGYGIIKE 411
+ AI R+ G R +G G + E
Sbjct: 375 KFAI-REGG---RTVGAGQVTE 392
>dbj|BAA88138.1| (AB035465) EF-Tu [Porphyromonas gingivalis]
Length = 395
Score = 137 bits (341), Expect = 3e-31
Identities = 129/434 (29%), Positives = 197/434 (44%), Gaps = 88/434 (20%)
Query: 12 VNIGMVGHVDHGKTTLTKALTGVWT-------------DTHSEELRRGITIKIGFADAEI 58
VN+G +GHVDHGKTTLT A+T V D EE RGITI +
Sbjct: 13 VNVGTIGHVDHGKTTLTAAITTVLAKRGLSELRSFDSIDNAPEEKERGITINTSHVE--- 69
Query: 59 RRCPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMDGAILVIAAN 118
Y T+ R + +D PGH + M+AGA+ MDGAI+V+AA
Sbjct: 70 --------YQTAN------------RHYAHVDCPGHADYVKNMVAGAAQMDGAIIVVAAT 109
Query: 119 EPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALE----NYRQIKEFIEGTVAEN 174
+ P PQTREH++ + + +++ NK ++VD E+ LE + R++ F + +N
Sbjct: 110 DG-PMPQTREHILLARQVNVPRLVVFMNKCDMVDDEEMLELVEMDMRELLSFYDFD-GDN 167
Query: 175 APIIPISALHGAN--------IDVLVKAIEDFIPTPKRDPNKPPKMLVLRSFDVNKPGTP 226
PII SAL N + L++A+++++P P+RD +KP M V F + GT
Sbjct: 168 TPIIRGSALGALNGEPQWEDKVMELMEAVDNWVPLPERDIDKPFLMPVEDVFSITGRGT- 226
Query: 227 PEKLVGGVLGGSIVQGKLKVGDEIEIRPGVPYEEHGRIKYEPITTEIVSLQAGGQFVEEA 286
V G I G +K GDE++I + E + + + ++ + ++E
Sbjct: 227 -------VATGRIETGIVKTGDEVQII---------GLGAEGMKSVVTGVEMFRKILDEG 270
Query: 287 YPGGLVGVGTKLDPYLTKGDLMAGNVVGKPGKLPPVWDSLRLEVHLLERVVGTEQELKVE 346
G VG+ L + K + G V+ PGK+ P + EV++L++ E+ +
Sbjct: 271 QAGDNVGL---LLRGIDKDQIKRGMVISHPGKITP-HKRFKAEVYILKK----EEGGRHT 322
Query: 347 PIKRKEVLLLNVGTARTMGLVTGLGKDE---------IEVKLQIPVCAEPGDRVAISRQI 397
P K + T G +T E I V+L PV G R AI R+
Sbjct: 323 PFHNKYRPQFYIRTLDVTGEITLPEGTEMVMPGDNVTITVELIYPVACNVGLRFAI-REG 381
Query: 398 GSRWRLIGYGIIKE 411
G R +G G I E
Sbjct: 382 G---RTVGAGQITE 392
>sp|Q9Z9L6|EFTU_BACHD ELONGATION FACTOR TU (EF-TU) >gi|11277705|pir||T44381 translation
elongation factor tufA [imported] - Bacillus halodurans
>gi|4512402|dbj|BAA75269.1| (AB017508) tufA homologue
(identity of 91% to B. subtilis ) [Bacillus halodurans]
>gi|10172744|dbj|BAB03851.1| (AP001507) translation
elongation factor Tu (EF-Tu) [Bacillus halodurans]
Length = 396
Score = 137 bits (341), Expect = 3e-31
Identities = 108/361 (29%), Positives = 171/361 (46%), Gaps = 70/361 (19%)
Query: 3 EKRKSRQAEVNIGMVGHVDHGKTTLTKALTGVWT--------------DTHSEELRRGIT 48
EK + NIG +GHVDHGKTTLT A+T V D EE RGIT
Sbjct: 4 EKFDRSKTHANIGTIGHVDHGKTTLTAAITTVLAKRSGKGVAMAYDAIDGAPEERERGIT 63
Query: 49 IKIGFADAEIRRCPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLM 108
I + +ET+ R + +D PGH + M+ GA+ M
Sbjct: 64 ISTAHVE----------------------YETD-NRHYAHVDCPGHADYVKNMITGAAQM 100
Query: 109 DGAILVIAANEPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALENYR-QIKEFI 167
DG ILV++A + P PQTREH++ + +G +++ NK ++VD E+ LE ++++ +
Sbjct: 101 DGGILVVSAADG-PMPQTREHILLSRQVGVPYLVVFLNKCDMVDDEELLELVEMEVRDLL 159
Query: 168 E--GTVAENAPIIPISALHGANIDV--------LVKAIEDFIPTPKRDPNKPPKMLVLRS 217
++ P+I SAL D L+ A++D+IPTP+RD KP M V
Sbjct: 160 SEYDFPGDDVPVIRGSALKALEGDAEWEEKIIELMAAVDDYIPTPERDTEKPFMMPVEDV 219
Query: 218 FDVNKPGTPPEKLVGGVLGGSIVQGKLKVGDEIEIRPGVPYEEHGRIKYEPITTEIVSLQ 277
F + GT V G + +G+L VGDE+EI + EE + T + ++
Sbjct: 220 FSITGRGT--------VATGRVERGQLNVGDEVEI---IGLEEEAK------KTTVTGVE 262
Query: 278 AGGQFVEEAYPGGLVGVGTKLDPYLTKGDLMAGNVVGKPGKLPPVWDSLRLEVHLLERVV 337
+ ++ A G +G L +++ ++ G V+ KPG + P + + EV++L +
Sbjct: 263 MFRKLLDYAEAGDNIGA---LLRGVSREEVQRGQVLAKPGTITP-HTNFKAEVYVLSKEE 318
Query: 338 G 338
G
Sbjct: 319 G 319
>gi|6324761 Translation elongation factor Tu, mitochondrial; Tuf1p
[Saccharomyces cerevisiae]
>gi|119216|sp|P02992|EFTU_YEAST ELONGATION FACTOR TU,
MITOCHONDRIAL PRECURSOR >gi|72868|pir||EFBYT translation
elongation factor EF-Tu precursor, mitochondrial - yeast
(Saccharomyces cerevisiae) >gi|1420449|emb|CAA99396.1|
(Z75095) ORF YOR187w [Saccharomyces cerevisiae]
Length = 437
Score = 136 bits (340), Expect = 4e-31
Identities = 106/332 (31%), Positives = 160/332 (47%), Gaps = 70/332 (21%)
Query: 12 VNIGMVGHVDHGKTTLTKALTGVWT-------------DTHSEELRRGITIKIGFADAEI 58
VNIG +GHVDHGKTTLT A+T D EE RGITI + E
Sbjct: 49 VNIGTIGHVDHGKTTLTAAITKTLAAKGGANFLDYAAIDKAPEERARGITISTAHVEYET 108
Query: 59 RRCPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMDGAILVIAAN 118
+ R S +D PGH + M+ GA+ MDGAI+V+AA
Sbjct: 109 AK-----------------------RHYSHVDCPGHADYIKNMITGAAQMDGAIIVVAAT 145
Query: 119 EPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALENYR-QIKEFIE--GTVAENA 175
+ PQTREHL+ + +G ++I++ NK++ +D + LE +++E + G +NA
Sbjct: 146 DG-QMPQTREHLLLARQVGVQHIVVFVNKVDTIDDPEMLELVEMEMRELLNEYGFDGDNA 204
Query: 176 PII---PISALHGANIDV-------LVKAIEDFIPTPKRDPNKPPKMLVLRSFDVNKPGT 225
PII + AL G ++ L+ A++++IPTP+RD NKP M V F ++ GT
Sbjct: 205 PIIMGSALCALEGRQPEIGEQAIMKLLDAVDEYIPTPERDLNKPFLMPVEDIFSISGRGT 264
Query: 226 PPEKLVGGVLGGSIVQGKLKVGDEIEIRPGVPYEEHGRIKYEPITTEIVSLQAGGQFVEE 285
V+ G + +G LK G+E+EI V + P+ T + ++ + ++
Sbjct: 265 --------VVTGRVERGNLKKGEELEI---VGHNS------TPLKTTVTGIEMFRKELDS 307
Query: 286 AYPGGLVGVGTKLDPYLTKGDLMAGNVVGKPG 317
A G GV L + + L G V+ KPG
Sbjct: 308 AMAGDNAGV---LLRGIRRDQLKRGMVLAKPG 336
>sp|P42473|EFTU_CHLVI ELONGATION FACTOR TU (EF-TU) >gi|560825|emb|CAA54322.1| (X77033)
elongation factor Tu [Chlorobium vibrioforme]
Length = 393
Score = 136 bits (339), Expect = 5e-31
Identities = 112/360 (31%), Positives = 168/360 (46%), Gaps = 71/360 (19%)
Query: 3 EKRKSRQAEVNIGMVGHVDHGKTTLTKALTGVWT-------------DTHSEELRRGITI 49
E K + VNIG +GHVDHGKTTLT A+T V D EE RGITI
Sbjct: 4 ESYKRDKPHVNIGTIGHVDHGKTTLTAAITSVLAKSGKAAAREFGDIDKAPEERERGITI 63
Query: 50 KIGFADAEIRRCPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMD 109
+ Y T R + ID PGH + M+ GA+ MD
Sbjct: 64 STAHVE-----------YQTDK------------RHYAHIDCPGHADYIKNMITGAAQMD 100
Query: 110 GAILVIAANEPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALENYRQIKEFIE- 168
GAILV+A + P PQTREH++ + + +++ NK+++ D E +++E +
Sbjct: 101 GAILVVAGTDG-PMPQTREHILLARQVNVPALVVFLNKVDIADPELLELVEMELRELLTE 159
Query: 169 -GTVAENAPIIPISALHGANID--------VLVKAIEDFIPTPKRDPNKPPKMLVLRSFD 219
G ++ PII SAL+ N D L+ A++D+IP P RD +KP M V F
Sbjct: 160 YGFPGDDIPIIKGSALNALNGDPEGEKAIMELMDAVDDYIPEPVRDVDKPFLMPVEDVFS 219
Query: 220 VNKPGTPPEKLVGGVLGGSIVQGKLKVGDEIEIRPGVPYEEHGRIKYEPITTEIVS-LQA 278
++ GT V G I +G +KVG+E+EI + +P T +V+ ++
Sbjct: 220 ISGRGT--------VGTGRIERGIIKVGNEVEI-----------VGIKPTTKSVVTGIEM 260
Query: 279 GGQFVEEAYPGGLVGVGTKLDPYLTKGDLMAGNVVGKPGKLPPVWDSLRLEVHLLERVVG 338
+ ++E G G+ L + K L G V+ KPG + P + EV++L++ G
Sbjct: 261 FQKTLDEGQAGDNAGL---LLRGVDKEALERGMVIAKPGSITP-HTKFKAEVYILKKEEG 316
>dbj|BAA88136.1| (AB035463) EF-Tu [Porphyromonas gingivalis]
Length = 395
Score = 136 bits (338), Expect = 6e-31
Identities = 107/352 (30%), Positives = 168/352 (47%), Gaps = 71/352 (20%)
Query: 12 VNIGMVGHVDHGKTTLTKALTGVWT-------------DTHSEELRRGITIKIGFADAEI 58
VN+G +GHVDHGKTTLT A+T V D EE RGITI +
Sbjct: 13 VNVGTIGHVDHGKTTLTAAITTVLAKRGLSELRSFDSIDNAPEEKERGITINTSHVE--- 69
Query: 59 RRCPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMDGAILVIAAN 118
Y T+ R + +D PGH + M+AGA+ MDGAI+V+AA
Sbjct: 70 --------YQTAN------------RHYAHVDCPGHADYVKNMVAGAAQMDGAIIVVAAT 109
Query: 119 EPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALE----NYRQIKEFIEGTVAEN 174
+ P PQTREH++ + + +++ NK ++VD E+ LE + R++ F + +N
Sbjct: 110 DG-PMPQTREHILLARQVNVPRLVVFMNKCDMVDDEEMLELVEMDMRELLSFYDFD-GDN 167
Query: 175 APIIPISALHGAN--------IDVLVKAIEDFIPTPKRDPNKPPKMLVLRSFDVNKPGTP 226
PII SAL N + L++A+++++P P+RD +KP M V F + GT
Sbjct: 168 TPIIRGSALGALNGEPQWEDKVMELMEAVDNWVPLPERDIDKPFLMPVEDVFSITGRGT- 226
Query: 227 PEKLVGGVLGGSIVQGKLKVGDEIEIRPGVPYEEHGRIKYEPITTEIVSLQAGGQFVEEA 286
V G I G +K GDE++I + E + + + ++ + ++E
Sbjct: 227 -------VATGRIETGIVKTGDEVQII---------GLGAEGMKSVVTGVEMFRKILDEG 270
Query: 287 YPGGLVGVGTKLDPYLTKGDLMAGNVVGKPGKLPPVWDSLRLEVHLLERVVG 338
G VG+ L + K + G V+ PGK+ P + EV++L++ G
Sbjct: 271 QAGDNVGL---LLRGIDKDQIKRGMVISHPGKITP-HKRFKAEVYILKKEEG 318
>emb|CAB53235.1| (AJ245960) elongation factor SelB [Eubacterium acidaminophilum]
Length = 626
Score = 136 bits (338), Expect = 6e-31
Identities = 112/391 (28%), Positives = 183/391 (46%), Gaps = 68/391 (17%)
Query: 14 IGMVGHVDHGKTTLTKALTGVWTDTHSEELRRGITIKIGFADAEIRRCPNCGRYSTSPVC 73
IG GH+DHGKTTL KALTG TD EE +RGI+I +GF + ++
Sbjct: 6 IGTAGHIDHGKTTLIKALTGKETDRLKEEKKRGISIDLGFTNFDL--------------- 50
Query: 74 PYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMDGAILVIAANEPCPRPQTREHLMAL 133
+R +D PGHE + MLAG MD +LV++A+E PQT EHL L
Sbjct: 51 -------PSGKRAGIVDVPGHEKFIKNMLAGVHGMDLVLLVVSADEGV-MPQTIEHLEIL 102
Query: 134 QIIGQKNIIIAQNKIELVDKEKALENYRQIKEFIEGTVAENAPIIPISALHGANIDVLVK 193
++ K +I K + VD + + E +EGT ENA I+ + ++ G I L +
Sbjct: 103 NLLDIKKGLIVITKADTVDTDFKELVKEDVMEKLEGTFLENADIVEVDSISGTGIKELTE 162
Query: 194 AIE---DFIPTPKRDPNKPPKMLVLRSFDVNKPGTPPEKLVGGVLGGSIVQGKLKVGDEI 250
I+ D + D N P++ + R F + GT V+ G++++GK+ + D++
Sbjct: 163 EIDRLTDEVEDKNIDAN--PRLSIDRVFSIKGFGT--------VVTGTLIEGKMNLDDDM 212
Query: 251 EIRPGVPYEEHGRIKYEPITTEIVSLQAGGQFVEEAYPGGLVGVGTKLDPYLTKGDLMAG 310
I PG I T+I SLQ G+ + AY G V + + ++ G
Sbjct: 213 MIYPG------------EIKTKIRSLQVHGESQKIAYAGQRVAINL---ANVRVEEIERG 257
Query: 311 NVVGKPGKLPPVWDSLRLEVHLLERVVGTEQELKVEPIKRKEVLLLNVGTARTMGLVTGL 370
+V+ KP + S+ ++V L+ + ++ L+ + + L G +G V L
Sbjct: 258 DVLAKPNSMQ---SSMMIDVK-LKLIKNLDRGLRY-----WDRIRLYHGAKEILGRVAFL 308
Query: 371 GKDEI--------EVKLQIPVCAEPGDRVAI 393
++E+ +++L+ + A+ DR I
Sbjct: 309 DREELAPGEECFCQIRLEDTIVAKKDDRFVI 339
>dbj|BAA88135.1| (AB035462) EF-Tu [Porphyromonas gingivalis]
>gi|6539458|dbj|BAA88137.1| (AB035464) EF-Tu
[Porphyromonas gingivalis]
Length = 395
Score = 135 bits (337), Expect = 8e-31
Identities = 128/434 (29%), Positives = 196/434 (44%), Gaps = 88/434 (20%)
Query: 12 VNIGMVGHVDHGKTTLTKALTGVWT-------------DTHSEELRRGITIKIGFADAEI 58
VN+G +GHVDHGKTTLT A+T V D EE RGITI +
Sbjct: 13 VNVGTIGHVDHGKTTLTAAITTVLAKRGLSELRSFDSIDNAPEEKERGITINTSHVE--- 69
Query: 59 RRCPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMDGAILVIAAN 118
Y T+ R + +D PGH + M+ GA+ MDGAI+V+AA
Sbjct: 70 --------YQTAN------------RHYAHVDCPGHADYVKNMVTGAAQMDGAIIVVAAT 109
Query: 119 EPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALE----NYRQIKEFIEGTVAEN 174
+ P PQTREH++ + + +++ NK ++VD E+ LE + R++ F + +N
Sbjct: 110 DG-PMPQTREHILLARQVNVPRLVVFMNKCDMVDDEEMLELVEMDMRELLSFYDFD-GDN 167
Query: 175 APIIPISALHGAN--------IDVLVKAIEDFIPTPKRDPNKPPKMLVLRSFDVNKPGTP 226
PII SAL N + L++A+++++P P+RD +KP M V F + GT
Sbjct: 168 TPIIRGSALGALNGEPQWEDKVMELMEAVDNWVPLPERDIDKPFLMPVEDVFSITGRGT- 226
Query: 227 PEKLVGGVLGGSIVQGKLKVGDEIEIRPGVPYEEHGRIKYEPITTEIVSLQAGGQFVEEA 286
V G I G +K GDE++I + E + + + ++ + ++E
Sbjct: 227 -------VATGRIETGIVKTGDEVQII---------GLGAEGMKSVVTGVEMFRKILDEG 270
Query: 287 YPGGLVGVGTKLDPYLTKGDLMAGNVVGKPGKLPPVWDSLRLEVHLLERVVGTEQELKVE 346
G VG+ L + K + G V+ PGK+ P + EV++L++ E+ +
Sbjct: 271 QAGDNVGL---LLRGIDKDQIKRGMVISHPGKITP-HKRFKAEVYILKK----EEGGRHT 322
Query: 347 PIKRKEVLLLNVGTARTMGLVTGLGKDE---------IEVKLQIPVCAEPGDRVAISRQI 397
P K + T G +T E I V+L PV G R AI R+
Sbjct: 323 PFHNKYRPQFYIRTLDVTGEITLPEGTEMVMPGDNVTITVELIYPVACNVGLRFAI-REG 381
Query: 398 GSRWRLIGYGIIKE 411
G R +G G I E
Sbjct: 382 G---RTVGAGQITE 392
>sp|Q46497|SELB_DESBA SELENOCYSTEINE-SPECIFIC ELONGATION FACTOR (SELB TRANSLATION FACTOR)
>gi|1487950|emb|CAA68184.1| (X99911)
selenocysteine-specific elongation factor
[Desulfomicrobium baculatum]
Length = 634
Score = 135 bits (337), Expect = 8e-31
Identities = 118/396 (29%), Positives = 185/396 (45%), Gaps = 74/396 (18%)
Query: 12 VNIGMVGHVDHGKTTLTKALTGVWTDTHSEELRRGITIKIGFADAEIRRCPNCGRYSTSP 71
V +G GH+DHGKT+L KALTG+ D +EE +RGITI++GFA ++ T
Sbjct: 3 VIMGTAGHIDHGKTSLIKALTGINCDRLAEEQKRGITIELGFAYLDL----------TPE 52
Query: 72 VCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMDGAILVIAANEPCPRPQTREHLM 131
V R+ ID PGHE + M++GA+ +D +LVIAA+E PQTREHL
Sbjct: 53 V------------RLGIIDVPGHERFVKNMVSGAAGIDFVLLVIAADEGI-MPQTREHLE 99
Query: 132 ALQIIGQKNIIIAQNKIELVDKEKALENYRQIKEFIEGTVAENAPIIPISALHGANIDVL 191
++G + ++A K ++V+++ + +++ ++ G+ E API+P+SA GA ++ L
Sbjct: 100 ICSLLGIRAGLVALTKTDMVEEDWLELVHEEVQTYLAGSFLEGAPIVPVSAHTGAGLEEL 159
Query: 192 VKAIED----FIPTPKRDPNKPPKMLVLRSFDVNKPGTPPEKLVGGVLGGSIVQGKLKVG 247
I + F P + D + P V R F + GT V+ G+ + G L++G
Sbjct: 160 KGYIAELSSTFAPDRRSDLFRLP---VDRVFTMKGHGT--------VVTGTSISGALRLG 208
Query: 248 DEIEIRPGVPYEEHGRIKYEPITTEIVSLQAGGQFVEEAYPGGLVGVGTKLDPYLTKGDL 307
+EIEI VP +++ LQ G E A G V L +L
Sbjct: 209 EEIEI---VPSGHRSKVR---------GLQVHGTAAEVARAGERTAVNLY---GLEVAEL 253
Query: 308 MAGNVVGKPGKL--PPVWDSLRLEVHLLERVVGTEQELKVEPIKRKEVLLLNVGTARTMG 365
G V+ P L PVWD V T P+K + + + G+ +
Sbjct: 254 ERGEVLAHPQTLFPSPVWD-----------VEMTCLSSSPNPLKHRTEVHFHHGSREILA 302
Query: 366 LVTGLGKDEIE--------VKLQIPVCAEPGDRVAI 393
+ L +D++E V+ P+ GDR +
Sbjct: 303 KLFFLDRDKLEPGETAVCQVRFPRPLPGVYGDRCIV 338
>pir||D81234 translation elongation factor Tu NMB0139 [imported] - Neisseria
meningitidis (group B strain MD58)
>gi|7225357|gb|AAF40598.1| (AE002372) translation
elongation factor Tu [Neisseria meningitidis MC58]
Length = 394
Score = 135 bits (336), Expect = 1e-30
Identities = 131/440 (29%), Positives = 201/440 (44%), Gaps = 87/440 (19%)
Query: 3 EKRKSRQAEVNIGMVGHVDHGKTTLTKALTGVWT-------------DTHSEELRRGITI 49
EK + + VN+G +GHVDHGKTTLT ALT + + D EE RGITI
Sbjct: 4 EKFERSKPHVNVGTIGHVDHGKTTLTAALTTILSKKFGGAAKAYDQIDNAPEEKARGITI 63
Query: 50 KIGFADAEIRRCPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMD 109
+ +ETE R + +D PGH + M+ GA+ MD
Sbjct: 64 NTSHVE----------------------YETE-TRHYAHVDCPGHADYVKNMITGAAQMD 100
Query: 110 GAILVIAANEPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALENYR-QIKEFIE 168
GAILV +A + P PQTREH++ + +G II+ NK ++VD + LE +I++ +
Sbjct: 101 GAILVCSAADG-PMPQTREHILLARQVGVPYIIVFMNKCDMVDDAELLELVEMEIRDLLS 159
Query: 169 G--TVAENAPIIPISALHGANIDV--------LVKAIEDFIPTPKRDPNKPPKMLVLRSF 218
++ PI+ SAL D L A++ +IPTP+R +KP + + F
Sbjct: 160 SYDFPGDDCPIVQGSALKALEGDAAYEEKIFELAAALDSYIPTPERAVDKPFLLPIEDVF 219
Query: 219 DVNKPGTPPEKLVGGVLGGSIVQGKLKVGDEIEIRPGVPYEEHGRIKYEPITTEIVSLQA 278
++ GT V+ G + +G + VGDEIEI V +E + T ++
Sbjct: 220 SISGRGT--------VVTGRVERGIIHVGDEIEI---VGLKETQK-------TTCTGVEM 261
Query: 279 GGQFVEEAYPGGLVGV---GTKLDPYLTKGDLMAGNVVGKPGKLPPVWDSLRLEVHLLER 335
+ ++E G VGV GTK + D+ G V+ KPG + P + EV++L +
Sbjct: 262 FRKLLDEGQAGDNVGVLLRGTK------REDVERGQVLAKPGTITP-HTKFKAEVYVLSK 314
Query: 336 VVGTEQELKVEPIKRKEVLLLNVGTARTMGLVTGL-----GKD-EIEVKLQIPVCAEPGD 389
G + R + + L G+ G++ I V+L P+ E G
Sbjct: 315 EEG-GRHTPFFANYRPQFYFRTTDVTGAVTLEEGVEMVMPGENVTITVELIAPIAMEEGL 373
Query: 390 RVAISRQIGSRWRLIGYGII 409
R AI R+ G R +G G++
Sbjct: 374 RFAI-REGG---RTVGAGVV 389
>sp|O69303|EFTU_CAMJE ELONGATION FACTOR TU (EF-TU) >gi|11277712|pir||A81392 translation
elongation factor EF-Tu Cj0470 [similarity] -
Campylobacter jejuni (strain NCTC 11168)
>gi|3114761|emb|CAA76676.1| (Y17167) EF-Tu protein
[Campylobacter jejuni] >gi|6967941|emb|CAB75108.1|
(AL139075) elongation factor TU [Campylobacter jejuni]
Length = 399
Score = 135 bits (336), Expect = 1e-30
Identities = 134/446 (30%), Positives = 205/446 (45%), Gaps = 90/446 (20%)
Query: 3 EKRKSRQAEVNIGMVGHVDHGKTTLTKALTGVWT-------------DTHSEELRRGITI 49
EK + VNIG +GHVDHGKTTLT A++ V + D EE RGITI
Sbjct: 4 EKFSRNKPHVNIGTIGHVDHGKTTLTAAISAVLSRRGLAELKDYDNIDNAPEEKERGITI 63
Query: 50 KIGFADAEIRRCPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMD 109
+TS + +ET+ R + +D PGH + M+ GA+ MD
Sbjct: 64 ------------------ATS----HIEYETD-NRHYAHVDCPGHADYVKNMITGAAQMD 100
Query: 110 GAILVIAANEPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALENYR-QIKEFIE 168
GAILV++A + P PQTREH++ + +G I++ NK ++VD + LE +I+E +
Sbjct: 101 GAILVVSAADG-PMPQTREHILLSRQVGVPYIVVFMNKADMVDDAELLELVEMEIRELLS 159
Query: 169 G--TVAENAPIIPISALH-------------GANIDVLVKAIEDFIPTPKRDPNKPPKML 213
++ PII SAL A I L+ A++ +IPTP RD K M
Sbjct: 160 SYDFPGDDTPIISGSALKALEEAKAGQDGEWSAKIMDLMAAVDSYIPTPTRDTEKDFLMP 219
Query: 214 VLRSFDVNKPGTPPEKLVGGVLGGSIVQGKLKVGDEIEIRPGVPYEEHGRIKYEPITTEI 273
+ F ++ GT V+ G I +G +KVGD IEI G+ + TT +
Sbjct: 220 IEDVFSISGRGT--------VVTGRIEKGVVKVGDTIEI-VGIK---------DTQTTTV 261
Query: 274 VSLQAGGQFVEEAYPGGLVGV---GTKLDPYLTKGDLMAGNVVGKPGKLPPVWDSLRLEV 330
++ + +++ G VGV GTK K +++ G V+ KP + P D EV
Sbjct: 262 TGVEMFRKEMDQGEAGDNVGVLLRGTK------KEEVIRGMVLAKPKSITPHTD-FEAEV 314
Query: 331 HLLERVVGTE-----QELKVEPIKRKEVLLLNVGTARTMGLVTGLGKDEIEVKLQIPVCA 385
++L + G + + R + ++ A + +V I V L PV
Sbjct: 315 YILNKDEGGRHTPFFNNYRPQFYVRTTDVTGSIKLADGVEMVMPGENVRITVSLIAPVAL 374
Query: 386 EPGDRVAISRQIGSRWRLIGYGIIKE 411
E G R AI R+ G + +G G++ +
Sbjct: 375 EEGTRFAI-REGG---KTVGSGVVSK 396
>dbj|BAA88134.1| (AB035461) EF-Tu [Porphyromonas gingivalis]
Length = 395
Score = 135 bits (336), Expect = 1e-30
Identities = 128/434 (29%), Positives = 196/434 (44%), Gaps = 88/434 (20%)
Query: 12 VNIGMVGHVDHGKTTLTKALTGVWT-------------DTHSEELRRGITIKIGFADAEI 58
VN+G +GHVDHGKTTLT A+T V D EE RGITI +
Sbjct: 13 VNVGTIGHVDHGKTTLTAAITTVLAKRGLSELRSFDSIDNAPEEKERGITINTSHVE--- 69
Query: 59 RRCPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMDGAILVIAAN 118
Y T+ R + +D PGH + M+AGA+ MDGAI+V+AA
Sbjct: 70 --------YQTAN------------RHYAHVDCPGHADYVKNMVAGAAQMDGAIIVVAAT 109
Query: 119 EPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALE----NYRQIKEFIEGTVAEN 174
+ P PQTREH++ + + +++ NK ++VD E+ LE + R++ F + +N
Sbjct: 110 DG-PMPQTREHILLARQVNVPRLVVFMNKCDMVDDEEMLELVEMDMRELLSFYDFD-GDN 167
Query: 175 APIIPISALHGAN--------IDVLVKAIEDFIPTPKRDPNKPPKMLVLRSFDVNKPGTP 226
PII SAL N + L++A+++++P P+RD + P M V F + GT
Sbjct: 168 TPIIRGSALGALNGEPQWEDKVMELMEAVDNWVPLPERDIDNPFLMPVEDVFSITGRGT- 226
Query: 227 PEKLVGGVLGGSIVQGKLKVGDEIEIRPGVPYEEHGRIKYEPITTEIVSLQAGGQFVEEA 286
V G I G +K GDE++I + E + + + ++ + ++E
Sbjct: 227 -------VATGRIETGIVKTGDEVQII---------GLGAEGMKSVVTGVEMFRKILDEG 270
Query: 287 YPGGLVGVGTKLDPYLTKGDLMAGNVVGKPGKLPPVWDSLRLEVHLLERVVGTEQELKVE 346
G VG+ L + K + G V+ PGK+ P + EV++L++ E+ +
Sbjct: 271 QAGDNVGL---LLRGIDKDQIKRGMVISHPGKITP-HKRFKAEVYILKK----EEGGRHT 322
Query: 347 PIKRKEVLLLNVGTARTMGLVTGLGKDE---------IEVKLQIPVCAEPGDRVAISRQI 397
P K + T G +T E I V+L PV G R AI R+
Sbjct: 323 PFHNKYRPQFYIRTLDVTGEITLPEGTEMVMPGDNVTITVELIYPVACNVGLRFAI-REG 381
Query: 398 GSRWRLIGYGIIKE 411
G R +G G I E
Sbjct: 382 G---RTVGAGQITE 392
>pir||A81235 translation elongation factor Tu NMB0124 [imported] - Neisseria
meningitidis (group B strain MD58, group A strain Z2491)
>gi|7225341|gb|AAF40583.1| (AE002371) translation
elongation factor Tu [Neisseria meningitidis MC58]
>gi|7378906|emb|CAB83449.1| (AL162752) elongation factor
TU [Neisseria meningitidis Z2491]
>gi|7378921|emb|CAB83464.1| (AL162752) elongation factor
TU [Neisseria meningitidis Z2491]
Length = 394
Score = 134 bits (335), Expect = 1e-30
Identities = 131/440 (29%), Positives = 200/440 (44%), Gaps = 87/440 (19%)
Query: 3 EKRKSRQAEVNIGMVGHVDHGKTTLTKALTGVWT-------------DTHSEELRRGITI 49
EK + + VN+G +GHVDHGKTTLT ALT + D EE RGITI
Sbjct: 4 EKFERSKPHVNVGTIGHVDHGKTTLTAALTTILAKKFGGAAKAYDQIDNAPEEKARGITI 63
Query: 50 KIGFADAEIRRCPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMD 109
+ +ETE R + +D PGH + M+ GA+ MD
Sbjct: 64 NTSHVE----------------------YETE-TRHYAHVDCPGHADYVKNMITGAAQMD 100
Query: 110 GAILVIAANEPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALENYR-QIKEFIE 168
GAILV +A + P PQTREH++ + +G II+ NK ++VD + LE +I++ +
Sbjct: 101 GAILVCSAADG-PMPQTREHILLARQVGVPYIIVFMNKCDMVDDAELLELVEMEIRDLLS 159
Query: 169 G--TVAENAPIIPISALHGANIDV--------LVKAIEDFIPTPKRDPNKPPKMLVLRSF 218
++ PI+ SAL D L A++ +IPTP+R +KP + + F
Sbjct: 160 SYDFPGDDCPIVQGSALKALEGDAAYEEKIFELAAALDSYIPTPERAVDKPFLLPIEDVF 219
Query: 219 DVNKPGTPPEKLVGGVLGGSIVQGKLKVGDEIEIRPGVPYEEHGRIKYEPITTEIVSLQA 278
++ GT V+ G + +G + VGDEIEI V +E + T ++
Sbjct: 220 SISGRGT--------VVTGRVERGIIHVGDEIEI---VGLKETQK-------TTCTGVEM 261
Query: 279 GGQFVEEAYPGGLVGV---GTKLDPYLTKGDLMAGNVVGKPGKLPPVWDSLRLEVHLLER 335
+ ++E G VGV GTK + D+ G V+ KPG + P + EV++L +
Sbjct: 262 FRKLLDEGQAGDNVGVLLRGTK------REDVERGQVLAKPGTITP-HTKFKAEVYVLSK 314
Query: 336 VVGTEQELKVEPIKRKEVLLLNVGTARTMGLVTGL-----GKD-EIEVKLQIPVCAEPGD 389
G + R + + L G+ G++ I V+L P+ E G
Sbjct: 315 EEG-GRHTPFFANYRPQFYFRTTDVTGAVTLEEGVEMVMPGENVTITVELIAPIAMEEGL 373
Query: 390 RVAISRQIGSRWRLIGYGII 409
R AI R+ G R +G G++
Sbjct: 374 RFAI-REGG---RTVGAGVV 389
>pir||S17146 translation elongation factor EF-Tu.B [validated] - Thermus
aquaticus >gi|312960|emb|CAA43956.1| (X61957) elongation
factor Tu [Thermus thermophilus]
>gi|228025|prf||1715213A elongation factor Tu [Thermus
aquaticus thermophilus]
Length = 406
Score = 134 bits (334), Expect = 2e-30
Identities = 107/345 (31%), Positives = 161/345 (46%), Gaps = 79/345 (22%)
Query: 12 VNIGMVGHVDHGKTTLTKALTGVWT--------------DTHSEELRRGITIKIGFADAE 57
VN+G +GHVDHGKTTLT ALT V D EE RGITI + E
Sbjct: 13 VNVGTIGHVDHGKTTLTAALTFVTAAENPNVEVKDYGDIDKAPEERARGITINTAHVEYE 72
Query: 58 IRRCPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMDGAILVIAA 117
+ R S +D PGH + M+ GA+ MDGAILV++A
Sbjct: 73 TAK-----------------------RHYSHVDCPGHADYIKNMITGAAQMDGAILVVSA 109
Query: 118 NEPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALENYR-QIKEFI--------E 168
+ P PQTREH++ + +G I++ NK+++VD + L+ ++++ + E
Sbjct: 110 ADG-PMPQTREHILLARQVGVPYIVVFMNKVDMVDDPELLDLVEMEVRDLLNQYEFPGDE 168
Query: 169 GTVAENAPIIPISALH-------GAN-----IDVLVKAIEDFIPTPKRDPNKPPKMLVLR 216
V + ++ + +H G N I L+ AI+++IPTP RD +KP M V
Sbjct: 169 VPVIRGSALLALEQMHRNPKTRRGENEWVDKIWELLDAIDEYIPTPVRDVDKPFLMPVED 228
Query: 217 SFDVNKPGTPPEKLVGGVLGGSIVQGKLKVGDEIEIRPGVPYEEHGRIKYEPITTEIVSL 276
F + GT V G I +GK+KVGDE+EI P E T + +
Sbjct: 229 VFTITGRGT--------VATGRIERGKVKVGDEVEIVGLAP---------ETRKTVVTGV 271
Query: 277 QAGGQFVEEAYPGGLVGVGTKLDPYLTKGDLMAGNVVGKPGKLPP 321
+ + ++E G VGV L +++ ++ G V+ KPG + P
Sbjct: 272 EMHRKTLQEGIAGDNVGV---LLRGVSREEVERGQVLAKPGSITP 313
>sp|P30768|EFTU_MYCLE ELONGATION FACTOR TU (EF-TU) >gi|479624|pir||S34954 elongation
factor Tu - Mycobacterium leprae
>gi|293242|gb|AAA71969.1| (L13276) peptide elongation
factor Tu [Mycobacterium leprae]
Length = 396
Score = 134 bits (334), Expect = 2e-30
Identities = 107/343 (31%), Positives = 163/343 (47%), Gaps = 69/343 (20%)
Query: 4 KRKSRQAEVNIGMVGHVDHGKTTLTKALTGV---------------WTDTHSEELRRGIT 48
K + + VNIG +GHVDHGKTTLT A+T V D EE +RGIT
Sbjct: 5 KFERTKPHVNIGTIGHVDHGKTTLTAAITKVLHDKFPNLNESRAFDQIDNAPEERQRGIT 64
Query: 49 IKIGFADAEIRRCPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLM 108
I I + ++TE R + +DAPGH + M+ GA+ M
Sbjct: 65 INISHVE----------------------YQTE-KRHYAHVDAPGHADYIKNMITGAAQM 101
Query: 109 DGAILVIAANEPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALENYR-QIKEFI 167
DGAILV+AA + P PQTREH++ + +G I++A NK + VD E+ LE +++E +
Sbjct: 102 DGAILVVAATDG-PMPQTREHVLLARQVGVPYILVALNKSDAVDDEELLELVEMEVRELL 160
Query: 168 EG-TVAENAPIIPISALHGANIDV--------LVKAIEDFIPTPKRDPNKPPKMLVLRSF 218
E+AP++ +SAL D L+ A+++ IP P R+ +KP M V F
Sbjct: 161 AAQEFDEDAPVVRVSALKALEGDAKWVESVTQLMDAVDESIPAPVRETDKPFLMPVEDVF 220
Query: 219 DVNKPGTPPEKLVGGVLGGSIVQGKLKVGDEIEIRPGVPYEEHGRIKYEPITTEIVSLQA 278
+ GT V+ G + +G + V +E+EI I+ T + ++
Sbjct: 221 TITGRGT--------VVTGRVERGVVNVNEEVEI---------VGIRQTTTKTTVTGVEM 263
Query: 279 GGQFVEEAYPGGLVGVGTKLDPYLTKGDLMAGNVVGKPGKLPP 321
+ +++ G VG+ L + + D+ G VV KPG P
Sbjct: 264 FRKLLDQGQAGDNVGL---LLRGIKREDVERGQVVIKPGTTTP 303
>pir||JC2262 translation elongation factor Tu - Mycobacterium leprae
Length = 396
Score = 134 bits (334), Expect = 2e-30
Identities = 107/343 (31%), Positives = 163/343 (47%), Gaps = 69/343 (20%)
Query: 4 KRKSRQAEVNIGMVGHVDHGKTTLTKALTGV---------------WTDTHSEELRRGIT 48
K + + VNIG +GHVDHGKTTLT A+T V D EE +RGIT
Sbjct: 5 KFERTKPHVNIGTIGHVDHGKTTLTAAITKVLHDKFPNLNESRAFDQIDNAPEERQRGIT 64
Query: 49 IKIGFADAEIRRCPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLM 108
I I + ++TE R + +DAPGH + M+ GA+ M
Sbjct: 65 INISHVE----------------------YQTE-KRHYAHVDAPGHADYIKNMITGAAQM 101
Query: 109 DGAILVIAANEPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALENYR-QIKEFI 167
DGAILV+AA + P PQTREH++ + +G I++A NK + VD E+ LE +++E +
Sbjct: 102 DGAILVVAATDG-PMPQTREHVLLARQVGVPYILVALNKSDAVDDEELLELVEMEVRELL 160
Query: 168 EG-TVAENAPIIPISALHGANIDV--------LVKAIEDFIPTPKRDPNKPPKMLVLRSF 218
E+AP++ +SAL D L+ A+++ IP P R+ +KP M V F
Sbjct: 161 AAQEFDEDAPVVRVSALKALEGDAKWVESVTQLMDAVDESIPAPVRETDKPFLMPVEDVF 220
Query: 219 DVNKPGTPPEKLVGGVLGGSIVQGKLKVGDEIEIRPGVPYEEHGRIKYEPITTEIVSLQA 278
+ GT V+ G + +G + V +E+EI I+ T + ++
Sbjct: 221 TITGRGT--------VVTGRVERGVVNVNEEVEI---------VGIRQTTTKTTVTGVEM 263
Query: 279 GGQFVEEAYPGGLVGVGTKLDPYLTKGDLMAGNVVGKPGKLPP 321
+ +++ G VG+ L + + D+ G VV KPG P
Sbjct: 264 FRKLLDQGQAGDNVGL---LLRGIKREDVERGQVVIKPGTTTP 303
>pdb|1AIP|E Chain E, Ef-Tu Ef-Ts Complex From Thermus Thermophilus
>gi|2624671|pdb|1AIP|A Chain A, Ef-Tu Ef-Ts Complex From
Thermus Thermophilus >gi|2624672|pdb|1AIP|B Chain B,
Ef-Tu Ef-Ts Complex From Thermus Thermophilus
>gi|2624676|pdb|1AIP|F Chain F, Ef-Tu Ef-Ts Complex From
Thermus Thermophilus
Length = 405
Score = 134 bits (334), Expect = 2e-30
Identities = 107/345 (31%), Positives = 161/345 (46%), Gaps = 79/345 (22%)
Query: 12 VNIGMVGHVDHGKTTLTKALTGVWT--------------DTHSEELRRGITIKIGFADAE 57
VN+G +GHVDHGKTTLT ALT V D EE RGITI + E
Sbjct: 12 VNVGTIGHVDHGKTTLTAALTYVTAAENPNVEVKDYGDIDKAPEERARGITINTAHVEYE 71
Query: 58 IRRCPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMDGAILVIAA 117
+ R S +D PGH + M+ GA+ MDGAILV++A
Sbjct: 72 TAK-----------------------RHYSHVDCPGHADYIKNMITGAAQMDGAILVVSA 108
Query: 118 NEPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALENYR-QIKEFI--------E 168
+ P PQTREH++ + +G I++ NK+++VD + L+ ++++ + E
Sbjct: 109 ADG-PMPQTREHILLARQVGVPYIVVFMNKVDMVDDPELLDLVEMEVRDLLNQYEFPGDE 167
Query: 169 GTVAENAPIIPISALH-------GAN-----IDVLVKAIEDFIPTPKRDPNKPPKMLVLR 216
V + ++ + +H G N I L+ AI+++IPTP RD +KP M V
Sbjct: 168 VPVIRGSALLALEQMHRNPKTRRGENEWVDKIWELLDAIDEYIPTPVRDVDKPFLMPVED 227
Query: 217 SFDVNKPGTPPEKLVGGVLGGSIVQGKLKVGDEIEIRPGVPYEEHGRIKYEPITTEIVSL 276
F + GT V G I +GK+KVGDE+EI P E T + +
Sbjct: 228 VFTITGRGT--------VATGRIERGKVKVGDEVEIVGLAP---------ETRRTVVTGV 270
Query: 277 QAGGQFVEEAYPGGLVGVGTKLDPYLTKGDLMAGNVVGKPGKLPP 321
+ + ++E G VGV L +++ ++ G V+ KPG + P
Sbjct: 271 EMHRKTLQEGIAGDNVGV---LLRGVSREEVERGQVLAKPGSITP 312
>dbj|BAA02982.2| (D13869) elongation factor Tu [Mycobacterium leprae]
Length = 396
Score = 134 bits (334), Expect = 2e-30
Identities = 107/343 (31%), Positives = 163/343 (47%), Gaps = 69/343 (20%)
Query: 4 KRKSRQAEVNIGMVGHVDHGKTTLTKALTGV---------------WTDTHSEELRRGIT 48
K + + VNIG +GHVDHGKTTLT A+T V D EE +RGIT
Sbjct: 5 KFERTKPHVNIGTIGHVDHGKTTLTAAITKVLHDKFPNLNESRAFDQIDNAPEERQRGIT 64
Query: 49 IKIGFADAEIRRCPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLM 108
I I + ++TE R + +DAPGH + M+ GA+ M
Sbjct: 65 INISHVE----------------------YQTE-KRHYAHVDAPGHADYIKNMITGAAQM 101
Query: 109 DGAILVIAANEPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALENYR-QIKEFI 167
DGAILV+AA + P PQTREH++ + +G I++A NK + VD E+ LE +++E +
Sbjct: 102 DGAILVVAATDG-PMPQTREHVLLARQVGVPYILVALNKSDAVDDEELLELVEMEVRELL 160
Query: 168 EG-TVAENAPIIPISALHGANIDV--------LVKAIEDFIPTPKRDPNKPPKMLVLRSF 218
E+AP++ +SAL D L+ A+++ IP P R+ +KP M V F
Sbjct: 161 AAQEFDEDAPVVRVSALKALEGDAKWVESVTQLMDAVDESIPAPVRETDKPFLMPVEDVF 220
Query: 219 DVNKPGTPPEKLVGGVLGGSIVQGKLKVGDEIEIRPGVPYEEHGRIKYEPITTEIVSLQA 278
+ GT V+ G + +G + V +E+EI I+ T + ++
Sbjct: 221 TITGRGT--------VVTGRVERGVVNVNEEVEI---------VGIRQTTTKTTVTGVEM 263
Query: 279 GGQFVEEAYPGGLVGVGTKLDPYLTKGDLMAGNVVGKPGKLPP 321
+ +++ G VG+ L + + D+ G VV KPG P
Sbjct: 264 FRKLLDQGQAGDNVGL---LLRGIKREDVERGQVVIKPGTTTP 303
>pdb|1EXM|A Chain A, Crystal Structure Of Thermus Thermophilus Elongation
Factor Tu (Ef-Tu) In Complex With The Gtp Analogue
Gppnhp
Length = 405
Score = 134 bits (334), Expect = 2e-30
Identities = 107/345 (31%), Positives = 161/345 (46%), Gaps = 79/345 (22%)
Query: 12 VNIGMVGHVDHGKTTLTKALTGVWT--------------DTHSEELRRGITIKIGFADAE 57
VN+G +GHVDHGKTTLT ALT V D EE RGITI + E
Sbjct: 12 VNVGTIGHVDHGKTTLTAALTFVTAAENPNVEVKDYGDIDKAPEERARGITINTAHVEYE 71
Query: 58 IRRCPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMDGAILVIAA 117
+ R S +D PGH + M+ GA+ MDGAILV++A
Sbjct: 72 TAK-----------------------RHYSHVDCPGHADYIKNMITGAAQMDGAILVVSA 108
Query: 118 NEPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALENYR-QIKEFI--------E 168
+ P PQTREH++ + +G I++ NK+++VD + L+ ++++ + E
Sbjct: 109 ADG-PMPQTREHILLARQVGVPYIVVFMNKVDMVDDPELLDLVEMEVRDLLNQYEFPGDE 167
Query: 169 GTVAENAPIIPISALH-------GAN-----IDVLVKAIEDFIPTPKRDPNKPPKMLVLR 216
V + ++ + +H G N I L+ AI+++IPTP RD +KP M V
Sbjct: 168 VPVIRGSALLALEQMHRNPKTRRGENEWVDKIWELLDAIDEYIPTPVRDVDKPFLMPVED 227
Query: 217 SFDVNKPGTPPEKLVGGVLGGSIVQGKLKVGDEIEIRPGVPYEEHGRIKYEPITTEIVSL 276
F + GT V G I +GK+KVGDE+EI P E T + +
Sbjct: 228 VFTITGRGT--------VATGRIERGKVKVGDEVEIVGLAP---------ETRKTVVTGV 270
Query: 277 QAGGQFVEEAYPGGLVGVGTKLDPYLTKGDLMAGNVVGKPGKLPP 321
+ + ++E G VGV L +++ ++ G V+ KPG + P
Sbjct: 271 EMHRKTLQEGIAGDNVGV---LLRGVSREEVERGQVLAKPGSITP 312
>sp|P07157|EFTU_THETH ELONGATION FACTOR TU (EF-TU) >gi|77584|pir||S00229 translation
elongation factor EF-Tu.A version 1 [validated] -
Thermus aquaticus >gi|48286|emb|CAA29856.1| (X06657)
elongation factor Tu (AA 1-406) [Thermus thermophilus]
>gi|225912|prf||1403291A tuf gene [Thermus aquaticus
thermophilus]
Length = 406
Score = 134 bits (333), Expect = 2e-30
Identities = 107/345 (31%), Positives = 161/345 (46%), Gaps = 79/345 (22%)
Query: 12 VNIGMVGHVDHGKTTLTKALTGVWT--------------DTHSEELRRGITIKIGFADAE 57
VN+G +GHVDHGKTTLT ALT V D EE RGITI + E
Sbjct: 13 VNVGTIGHVDHGKTTLTAALTYVAAAENPNVEVKDYGDIDKAPEERARGITINTAHVEYE 72
Query: 58 IRRCPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMDGAILVIAA 117
+ R S +D PGH + M+ GA+ MDGAILV++A
Sbjct: 73 TAK-----------------------RHYSHVDCPGHADYIKNMITGAAQMDGAILVVSA 109
Query: 118 NEPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALENYR-QIKEFI--------E 168
+ P PQTREH++ + +G I++ NK+++VD + L+ ++++ + E
Sbjct: 110 ADG-PMPQTREHILLARQVGVPYIVVFMNKVDMVDDPELLDLVEMEVRDLLNQYEFPGDE 168
Query: 169 GTVAENAPIIPISALH-------GAN-----IDVLVKAIEDFIPTPKRDPNKPPKMLVLR 216
V + ++ + +H G N I L+ AI+++IPTP RD +KP M V
Sbjct: 169 VPVIRGSALLALEQMHRNPKTRRGENEWVDKIWELLDAIDEYIPTPVRDVDKPFLMPVED 228
Query: 217 SFDVNKPGTPPEKLVGGVLGGSIVQGKLKVGDEIEIRPGVPYEEHGRIKYEPITTEIVSL 276
F + GT V G I +GK+KVGDE+EI P E T + +
Sbjct: 229 VFTITGRGT--------VATGRIERGKVKVGDEVEIVGLAP---------ETRRTVVTGV 271
Query: 277 QAGGQFVEEAYPGGLVGVGTKLDPYLTKGDLMAGNVVGKPGKLPP 321
+ + ++E G VGV L +++ ++ G V+ KPG + P
Sbjct: 272 EMHRKTLQEGIAGDNVGV---LLRGVSREEVERGQVLAKPGSITP 313
>emb|CAA29397.1| (X05977) elongation factor Tu (AA 1 - 406) [Thermus thermophilus]
Length = 406
Score = 134 bits (333), Expect = 2e-30
Identities = 107/345 (31%), Positives = 161/345 (46%), Gaps = 79/345 (22%)
Query: 12 VNIGMVGHVDHGKTTLTKALTGVWT--------------DTHSEELRRGITIKIGFADAE 57
VN+G +GHVDHGKTTLT ALT V D EE RGITI + E
Sbjct: 13 VNVGTIGHVDHGKTTLTAALTYVAAAENPNVEVKDYGDIDKAPEERARGITINTAHVEYE 72
Query: 58 IRRCPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMDGAILVIAA 117
+ R S +D PGH + M+ GA+ MDGAILV++A
Sbjct: 73 TAK-----------------------RHYSHVDCPGHADYIKNMITGAAQMDGAILVVSA 109
Query: 118 NEPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALENYR-QIKEFI--------E 168
+ P PQTREH++ + +G I++ NK+++VD + L+ ++++ + E
Sbjct: 110 ADG-PMPQTREHILLARQVGVPYIVVFMNKVDMVDDPELLDLVEMEVRDLLNQYEFPGDE 168
Query: 169 GTVAENAPIIPISALH-------GAN-----IDVLVKAIEDFIPTPKRDPNKPPKMLVLR 216
V + ++ + +H G N I L+ AI+++IPTP RD +KP M V
Sbjct: 169 VPVIRGSALLALEQMHRNPKTRRGENEWVDKIWELLDAIDEYIPTPVRDVDKPFLMPVED 228
Query: 217 SFDVNKPGTPPEKLVGGVLGGSIVQGKLKVGDEIEIRPGVPYEEHGRIKYEPITTEIVSL 276
F + GT V G I +GK+KVGDE+EI P E T + +
Sbjct: 229 VFTITGRGT--------VATGRIERGKVKVGDEVEIVGLAP---------ETRRTVVTGV 271
Query: 277 QAGGQFVEEAYPGGLVGVGTKLDPYLTKGDLMAGNVVGKPGKLPP 321
+ + ++E G VGV L +++ ++ G V+ KPG + P
Sbjct: 272 EMHRKTLQEGIAGDNVGV---LLRGVSREEVERGQVLAKPGSITP 313
>sp|Q01698|EFTU_THEAQ ELONGATION FACTOR TU (EF-TU) >gi|478775|pir||S29293 translation
elongation factor EF-Tu.A version 2 [validated] -
Thermus aquaticus >gi|49098|emb|CAA46998.1| (X66322)
elongation factor Tu [Thermus aquaticus]
Length = 406
Score = 133 bits (331), Expect = 4e-30
Identities = 109/362 (30%), Positives = 168/362 (46%), Gaps = 80/362 (22%)
Query: 12 VNIGMVGHVDHGKTTLTKALTGVWT--------------DTHSEELRRGITIKIGFADAE 57
VN+G +GHVDHGKTTLT ALT V D EE RGITI + E
Sbjct: 13 VNVGTIGHVDHGKTTLTAALTYVAAAENPNVEVKDYGDIDKAPEERARGITINTAHVEYE 72
Query: 58 IRRCPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMDGAILVIAA 117
+ R S +D PGH + M+ GA+ MDGAILV++A
Sbjct: 73 TAK-----------------------RHYSHVDCPGHADYIKNMITGAAQMDGAILVVSA 109
Query: 118 NEPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALENYR-QIKEFI--------E 168
+ P PQTREH++ + +G I++ NK+++VD + L+ ++++ + E
Sbjct: 110 ADG-PMPQTREHILLARQVGVPYIVVFMNKVDMVDDPELLDLVEMEVRDLLNQYEFPGDE 168
Query: 169 GTVAENAPIIPISALH-------GAN-----IDVLVKAIEDFIPTPKRDPNKPPKMLVLR 216
V + ++ + +H G N I L+ AI+++IPTP RD +KP M V
Sbjct: 169 VPVIRGSALLALEEMHKNPKTKRGENEWVDKIWELLDAIDEYIPTPVRDVDKPFLMPVED 228
Query: 217 SFDVNKPGTPPEKLVGGVLGGSIVQGKLKVGDEIEIRPGVPYEEHGRIKYEPITTEIVSL 276
F + GT V G I +GK+KVGDE+EI P E T + +
Sbjct: 229 VFTITGRGT--------VATGRIERGKVKVGDEVEIVGLAP---------ETRKTVVTGV 271
Query: 277 QAGGQFVEEAYPGGLVGVGTKLDPYLTKGDLMAGNVVGKPGKLPPVWDSLRLEVHLLERV 336
+ + ++E G VG+ L +++ ++ G V+ KPG + P V++L++
Sbjct: 272 EMHRKTLQEGIAGDNVGL---LLRGVSREEVERGQVLAKPGSITP-HTKFEASVYILKKE 327
Query: 337 VG 338
G
Sbjct: 328 EG 329
>pdb|1EFT| Elongation Factor Tu (Ef-Tu) Complexed With
Guanosine-5'-(Beta,Gamma-Imido) Triphosphate (Gdpnp)
Length = 405
Score = 133 bits (331), Expect = 4e-30
Identities = 106/345 (30%), Positives = 161/345 (45%), Gaps = 79/345 (22%)
Query: 12 VNIGMVGHVDHGKTTLTKALTGVWT--------------DTHSEELRRGITIKIGFADAE 57
VN+G +GHVDHGKTTLT ALT V D EE RGITI + E
Sbjct: 12 VNVGTIGHVDHGKTTLTAALTFVTAAENPNVEVKDYGDIDKAPEERARGITINTAHVEYE 71
Query: 58 IRRCPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMDGAILVIAA 117
+ R S +D PGH + M+ GA+ MDGAILV++A
Sbjct: 72 TAK-----------------------RHYSHVDCPGHADYIKNMITGAAQMDGAILVVSA 108
Query: 118 NEPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALENYR-QIKEFI--------E 168
+ P PQTREH++ + +G I++ NK+++VD + L+ ++++ + E
Sbjct: 109 ADG-PMPQTREHILLARQVGVPYIVVFMNKVDMVDDPELLDLVEMEVRDLLNQYEFPGDE 167
Query: 169 GTVAENAPIIPISALH-------GAN-----IDVLVKAIEDFIPTPKRDPNKPPKMLVLR 216
V + ++ + +H G N I L+ AI+++IPTP RD +KP M V
Sbjct: 168 VPVIRGSALLALEEMHKNPKTKRGENEWVDKIWELLDAIDEYIPTPVRDVDKPFLMPVED 227
Query: 217 SFDVNKPGTPPEKLVGGVLGGSIVQGKLKVGDEIEIRPGVPYEEHGRIKYEPITTEIVSL 276
F + GT V G I +GK+KVGDE+EI P E T + +
Sbjct: 228 VFTITGRGT--------VATGRIERGKVKVGDEVEIVGLAP---------ETRKTVVTGV 270
Query: 277 QAGGQFVEEAYPGGLVGVGTKLDPYLTKGDLMAGNVVGKPGKLPP 321
+ + ++E G VG+ L +++ ++ G V+ KPG + P
Sbjct: 271 EMHRKTLQEGIAGDNVGL---LLRGVSREEVERGQVLAKPGSITP 312
>pdb|1B23|P Chain P, E. Coli Cysteinyl-Trna And T. Aquaticus Elongation Factor
Ef-Tu:gtp Ternary Complex >gi|1942754|pdb|1TTT|A Chain
A, Phe-Trna, Elongation Factor Ef-Tu:gdpnp Ternary
Complex >gi|1942755|pdb|1TTT|B Chain B, Phe-Trna,
Elongation Factor Ef-Tu:gdpnp Ternary Complex
>gi|1942756|pdb|1TTT|C Chain C, Phe-Trna, Elongation
Factor Ef-Tu:gdpnp Ternary Complex
>gi|2392582|pdb|1TUI|A Chain A, Intact Elongation Factor
Tu In Complex With Gdp >gi|2392583|pdb|1TUI|B Chain B,
Intact Elongation Factor Tu In Complex With Gdp
>gi|2392584|pdb|1TUI|C Chain C, Intact Elongation Factor
Tu In Complex With Gdp
Length = 405
Score = 133 bits (331), Expect = 4e-30
Identities = 109/362 (30%), Positives = 168/362 (46%), Gaps = 80/362 (22%)
Query: 12 VNIGMVGHVDHGKTTLTKALTGVWT--------------DTHSEELRRGITIKIGFADAE 57
VN+G +GHVDHGKTTLT ALT V D EE RGITI + E
Sbjct: 12 VNVGTIGHVDHGKTTLTAALTYVAAAENPNVEVKDYGDIDKAPEERARGITINTAHVEYE 71
Query: 58 IRRCPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMDGAILVIAA 117
+ R S +D PGH + M+ GA+ MDGAILV++A
Sbjct: 72 TAK-----------------------RHYSHVDCPGHADYIKNMITGAAQMDGAILVVSA 108
Query: 118 NEPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALENYR-QIKEFI--------E 168
+ P PQTREH++ + +G I++ NK+++VD + L+ ++++ + E
Sbjct: 109 ADG-PMPQTREHILLARQVGVPYIVVFMNKVDMVDDPELLDLVEMEVRDLLNQYEFPGDE 167
Query: 169 GTVAENAPIIPISALH-------GAN-----IDVLVKAIEDFIPTPKRDPNKPPKMLVLR 216
V + ++ + +H G N I L+ AI+++IPTP RD +KP M V
Sbjct: 168 VPVIRGSALLALEEMHKNPKTKRGENEWVDKIWELLDAIDEYIPTPVRDVDKPFLMPVED 227
Query: 217 SFDVNKPGTPPEKLVGGVLGGSIVQGKLKVGDEIEIRPGVPYEEHGRIKYEPITTEIVSL 276
F + GT V G I +GK+KVGDE+EI P E T + +
Sbjct: 228 VFTITGRGT--------VATGRIERGKVKVGDEVEIVGLAP---------ETRKTVVTGV 270
Query: 277 QAGGQFVEEAYPGGLVGVGTKLDPYLTKGDLMAGNVVGKPGKLPPVWDSLRLEVHLLERV 336
+ + ++E G VG+ L +++ ++ G V+ KPG + P V++L++
Sbjct: 271 EMHRKTLQEGIAGDNVGL---LLRGVSREEVERGQVLAKPGSITP-HTKFEASVYILKKE 326
Query: 337 VG 338
G
Sbjct: 327 EG 328
>sp|P74227|EFTU_SYNY3 ELONGATION FACTOR TU (EF-TU) >gi|7443388|pir||S75862 translation
elongation factor EF-Tu - Synechocystis sp. (strain PCC
6803) >gi|1653407|dbj|BAA18321.1| (D90913) protein
synthesis elongation factor Tu [Synechocystis sp.]
Length = 399
Score = 132 bits (330), Expect = 5e-30
Identities = 129/438 (29%), Positives = 197/438 (44%), Gaps = 92/438 (21%)
Query: 12 VNIGMVGHVDHGKTTLTKALTGVWT-------------DTHSEELRRGITIKIGFADAEI 58
VNIG +GHVDHGKTTLT A+T D EE RGITI +
Sbjct: 13 VNIGTIGHVDHGKTTLTAAITMTLAELGGAKARKYEDIDAAPEEKARGITINTAHVE--- 69
Query: 59 RRCPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMDGAILVIAAN 118
+ET+ R + +D PGH + M+ GA+ MDGAILV++A
Sbjct: 70 -------------------YETDS-RHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAA 109
Query: 119 EPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALENYR-QIKEFIE--GTVAENA 175
+ P PQTREH++ + +G +++ NK ++VD E+ LE +++E + ++
Sbjct: 110 DG-PMPQTREHILLAKQVGVPKLVVFLNKKDMVDDEELLELVELEVRELLSDYDFPGDDI 168
Query: 176 PIIPISALHGAN--------IDVLVKAIEDFIPTPKRDPNKPPKMLVLRSFDVNKPGTPP 227
PI+ SAL I L+KA++D+I TP+R+ +KP M V F + GT
Sbjct: 169 PIVAGSALKAIEGEKEYKDAILELMKAVDDYIDTPEREVDKPFLMAVEDVFSITGRGT-- 226
Query: 228 EKLVGGVLGGSIVQGKLKVGDEIEIRPGVPYEEHGRIKYEPITTEIVSLQAGGQFVEEAY 287
V G I +GK+KVG+EI I G+ + + ++ + +EE
Sbjct: 227 ------VATGRIERGKVKVGEEISI-VGIK---------DTRKATVTGVEMFQKTLEEGM 270
Query: 288 PGGLVGVGTKLDPYLTKGDLMAGNVVGKPGKLPPVWDSLRLEVHLLERVVGTEQELKVEP 347
G VG+ L + K D+ G V+ KPG + P EV++L++ E+ + P
Sbjct: 271 AGDNVGL---LLRGIQKEDIERGMVLAKPGSITP-HTEFEGEVYVLKK----EEGGRHTP 322
Query: 348 IKRKEVLLLNVGTARTMGLVTGLGKDE--------------IEVKLQIPVCAEPGDRVAI 393
V T G + D+ + V+L P+ E G R AI
Sbjct: 323 FFANYRPQFYVRTTDVTGTIKSYTADDGSAVEMVMPGDRIKMTVELINPIAIEQGMRFAI 382
Query: 394 SRQIGSRWRLIGYGIIKE 411
R+ G R IG G++ +
Sbjct: 383 -REGG---RTIGAGVVSK 396
>sp|P72231|EFTU_PLARO ELONGATION FACTOR TU (EF-TU) >gi|1679859|emb|CAA67345.1| (X98830)
elongation factor Tu [Planobispora rosea]
Length = 397
Score = 132 bits (330), Expect = 5e-30
Identities = 102/346 (29%), Positives = 171/346 (48%), Gaps = 41/346 (11%)
Query: 4 KRKSRQAEVNIGMVGHVDHGKTTLTKALTGVWTDTHSEELRRGITIKIGFADAEIRRCPN 63
K + + +NIG +GH+DHGKTTLT A+T V D + E + KI A E R
Sbjct: 5 KLERTKPHMNIGTIGHIDHGKTTLTAAITKVLHDRYPELNKATPFDKIDKAPEEKAR--- 61
Query: 64 CGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMDGAILVIAANEPCPR 123
+ + ++TE R + +D PGH + M+ GA+ MDGAILV+AA + P
Sbjct: 62 ----GITISIAHVEYQTE-KRHYAHVDCPGHADYVKNMITGAAQMDGAILVVAATDG-PM 115
Query: 124 PQTREHLMALQIIGQKNIIIAQNKIELVDKEKALENYR-QIKEFIEGT--VAENAPIIPI 180
PQT+EH++ + +G I++A NK ++VD E+ LE +++E + ++ P++ +
Sbjct: 116 PQTKEHVLLARQVGVPYIVVALNKADMVDDEEILELVELEVRELLSAQEFPGDDLPVVRV 175
Query: 181 SALHGA--------NIDVLVKAIEDFIPTPKRDPNKPPKMLVLRSFDVNKPGTPPEKLVG 232
SAL +I L+ A+++ IP P RD +KP M + F + GT
Sbjct: 176 SALKALEGDEKWADSIIELMNAVDENIPEPPRDTDKPFLMPIEDVFSITGRGT------- 228
Query: 233 GVLGGSIVQGKLKVGDEIEIRPGVPYEEHGRIKYEPITTEIVSLQAGGQFVEEAYPGGLV 292
V+ G I +G +KV ++++I IK E TT + S++ + ++E + G
Sbjct: 229 -VVTGRIERGVVKVNEQVDII---------GIKSEKTTTTVTSIEMFNKMLDEGHAGDNA 278
Query: 293 GVGTKLDPYLTKGDLMAGNVVGKPGKLPPVWDSLRLEVHLLERVVG 338
+ L + + + G + KPG P +V++L + G
Sbjct: 279 AL---LLRGIKREQVERGQCIIKPGTTTP-HTEFEAQVYILSKDEG 320
>dbj|BAA88139.1| (AB035466) EF-Tu [Bacteroides forsythus]
Length = 395
Score = 132 bits (330), Expect = 5e-30
Identities = 127/434 (29%), Positives = 195/434 (44%), Gaps = 88/434 (20%)
Query: 12 VNIGMVGHVDHGKTTLTKALTGVWT-------------DTHSEELRRGITIKIGFADAEI 58
VN+G +GHVDHGKTTLT A+T V D EE RGITI +
Sbjct: 13 VNVGTIGHVDHGKTTLTAAITTVLAKRGLSELRSFDSIDNAPEEKERGITINTSHVE--- 69
Query: 59 RRCPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMDGAILVIAAN 118
Y T+ R + +D PGH + M+ GA+ MDGAI+V+AA
Sbjct: 70 --------YQTAN------------RHYAHVDCPGHADYVKNMVTGAAQMDGAIIVVAAT 109
Query: 119 EPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALE----NYRQIKEFIEGTVAEN 174
+ P PQTREH++ + + +++ NK ++VD E+ LE + R++ F + +
Sbjct: 110 DG-PMPQTREHILLARQVNVPRLVVFMNKCDMVDDEEMLELVEMDMRELLSFYDFD-GDX 167
Query: 175 APIIPISALHGAN--------IDVLVKAIEDFIPTPKRDPNKPPKMLVLRSFDVNKPGTP 226
PII SAL N + L++A+++++P P+RD +KP M V F + GT
Sbjct: 168 TPIIRGSALGALNGEPQWEDKVMELMEAVDNWVPLPERDIDKPFLMPVEDVFSITGRGT- 226
Query: 227 PEKLVGGVLGGSIVQGKLKVGDEIEIRPGVPYEEHGRIKYEPITTEIVSLQAGGQFVEEA 286
V G I G +K GDE++I + E + + + ++ + ++E
Sbjct: 227 -------VATGRIETGIVKTGDEVQII---------GLGAEGMKSVVTGVEMFRKILDEG 270
Query: 287 YPGGLVGVGTKLDPYLTKGDLMAGNVVGKPGKLPPVWDSLRLEVHLLERVVGTEQELKVE 346
G VG+ L + K + G V+ PGK+ P + EV++L++ E+ +
Sbjct: 271 QAGDNVGL---LLRGIDKDQIKRGMVISHPGKITP-HKRFKAEVYILKK----EEGGRHT 322
Query: 347 PIKRKEVLLLNVGTARTMGLVTGLGKDE---------IEVKLQIPVCAEPGDRVAISRQI 397
P K + T G +T E I V+L PV G R AI R+
Sbjct: 323 PFHNKYRPQFYIRTLDVTGEITLPEGTEMVMPGDNVTITVELIYPVACNVGLRFAI-REG 381
Query: 398 GSRWRLIGYGIIKE 411
G R +G G I E
Sbjct: 382 G---RTVGAGQITE 392
>dbj|BAB13219.1| (AP001119) elongation factor EF-Tu [Buchnera sp. APS]
Length = 423
Score = 132 bits (329), Expect = 7e-30
Identities = 111/363 (30%), Positives = 174/363 (47%), Gaps = 76/363 (20%)
Query: 3 EKRKSRQAEVNIGMVGHVDHGKTTLTKALTGVWT-------------DTHSEELRRGITI 49
EK + + +N+G +GHVDHGKTTLT A+T V + D EE RGITI
Sbjct: 33 EKFQRLKPHINVGTIGHVDHGKTTLTAAITTVLSKKFGGSARAFDQIDNAPEEKARGITI 92
Query: 50 KIGFADAEIRRCPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMD 109
+ ++TEF R + +D PGH + M+ GA+ MD
Sbjct: 93 NTSHVE----------------------YDTEF-RHYAHVDCPGHADYIKNMITGAAQMD 129
Query: 110 GAILVIAANEPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALENYR-QIKEFIE 168
GAILV+AA + P PQTREH++ + +G II+ NK ++VD E+ LE ++++ +
Sbjct: 130 GAILVVAATDG-PMPQTREHILLGRQVGVPYIIVFLNKCDMVDDEELLELVEMEVRDLLT 188
Query: 169 --GTVAENAPIIPISALHG--------ANIDVLVKAIEDFIPTPKRDPNKPPKMLVLRSF 218
++ PII SAL + I L K ++ +IP PKR ++P + + F
Sbjct: 189 QYDFPGDDTPIIRGSALKALEGDPEWESKIIDLSKFLDSYIPEPKRAVDQPFLLPIEDVF 248
Query: 219 DVNKPGTPPEKLVGGVLGGSIVQGKLKVGDEIEIRPGVPYEEHGRIKYEPITTEIVSLQA 278
++ GT V+ G + +G +KVG+E+EI G+ + T ++
Sbjct: 249 SISGRGT--------VVTGRVEKGIIKVGEEVEI-VGIK---------KTTKTTCTGVEM 290
Query: 279 GGQFVEEAYPGGLVGV---GTKLDPYLTKGDLMAGNVVGKPGKLPPVWDSLRLEVHLLER 335
+ ++E G VGV GTK D ++ G V+ KPG + P + EV++L +
Sbjct: 291 FRKLLDEGRAGENVGVLLRGTKRD------EIERGQVLAKPGSIHP-HTTFESEVYVLSK 343
Query: 336 VVG 338
G
Sbjct: 344 EEG 346
>sp|O31297|EFTU_BUCAI ELONGATION FACTOR TU (EF-TU)
Length = 394
Score = 132 bits (329), Expect = 7e-30
Identities = 111/363 (30%), Positives = 174/363 (47%), Gaps = 76/363 (20%)
Query: 3 EKRKSRQAEVNIGMVGHVDHGKTTLTKALTGVWT-------------DTHSEELRRGITI 49
EK + + +N+G +GHVDHGKTTLT A+T V + D EE RGITI
Sbjct: 4 EKFQRLKPHINVGTIGHVDHGKTTLTAAITTVLSKKFGGSARAFDQIDNAPEEKARGITI 63
Query: 50 KIGFADAEIRRCPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMD 109
+ ++TEF R + +D PGH + M+ GA+ MD
Sbjct: 64 NTSHVE----------------------YDTEF-RHYAHVDCPGHADYIKNMITGAAQMD 100
Query: 110 GAILVIAANEPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALENYR-QIKEFIE 168
GAILV+AA + P PQTREH++ + +G II+ NK ++VD E+ LE ++++ +
Sbjct: 101 GAILVVAATDG-PMPQTREHILLGRQVGVPYIIVFLNKCDMVDDEELLELVEMEVRDLLT 159
Query: 169 --GTVAENAPIIPISALHG--------ANIDVLVKAIEDFIPTPKRDPNKPPKMLVLRSF 218
++ PII SAL + I L K ++ +IP PKR ++P + + F
Sbjct: 160 QYDFPGDDTPIIRGSALKALEGDPEWESKIIDLSKFLDSYIPEPKRAVDQPFLLPIEDVF 219
Query: 219 DVNKPGTPPEKLVGGVLGGSIVQGKLKVGDEIEIRPGVPYEEHGRIKYEPITTEIVSLQA 278
++ GT V+ G + +G +KVG+E+EI G+ + T ++
Sbjct: 220 SISGRGT--------VVTGRVEKGIIKVGEEVEI-VGIK---------KTTKTTCTGVEM 261
Query: 279 GGQFVEEAYPGGLVGV---GTKLDPYLTKGDLMAGNVVGKPGKLPPVWDSLRLEVHLLER 335
+ ++E G VGV GTK D ++ G V+ KPG + P + EV++L +
Sbjct: 262 FRKLLDEGRAGENVGVLLRGTKRD------EIERGQVLAKPGSIHP-HTTFESEVYVLSK 314
Query: 336 VVG 338
G
Sbjct: 315 EEG 317
>sp|P09953|EFTU_MICLU ELONGATION FACTOR TU (EF-TU) >gi|79832|pir||D26956 translation
elongation factor EF-Tu - Micrococcus luteus
>gi|149854|gb|AAA25320.1| (M17788) elongation factor Tu
(gtg start codon) [Micrococcus luteus]
Length = 396
Score = 132 bits (328), Expect = 9e-30
Identities = 105/347 (30%), Positives = 169/347 (48%), Gaps = 77/347 (22%)
Query: 4 KRKSRQAEVNIGMVGHVDHGKTTLTKALTGVWTDTH---------------SEELRRGIT 48
K + +A VNIG +GHVDHGKTTLT A++ V D + EE +RGIT
Sbjct: 5 KFERTKAHVNIGTIGHVDHGKTTLTAAISKVLYDKYPDLNEARDFATIDSAPEERQRGIT 64
Query: 49 IKIGFADAEIRRCPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLM 108
I I + ++TE R + +DAPGH + M+ GA+ M
Sbjct: 65 INISHVE----------------------YQTE-KRHYAHVDAPGHADYIKNMITGAAQM 101
Query: 109 DGAILVIAANEPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALENYR-QIKEFI 167
DGAILV+AA + P QTREH++ + +G +++A NK ++V+ E+ LE ++++ +
Sbjct: 102 DGAILVVAATDG-PMAQTREHVLLARQVGVPALLVALNKSDMVEDEELLERVEMEVRQLL 160
Query: 168 EGTV--AENAPIIPISALHG--------ANIDVLVKAIEDFIPTPKRDPNKPPKMLVLRS 217
+ AP+I SAL +++ L+ A++++IP P RD +KP M +
Sbjct: 161 SSRSFDVDEAPVIRTSALKALEGDPQWVKSVEDLMDAVDEYIPDPVRDKDKPFLMPIEDV 220
Query: 218 FDVNKPGTPPEKLVGGVLGGSIVQGKLKVGDEIEIRPGVPYEEHGRIKYEPITTEIVSLQ 277
F + GT V+ G +G LK+ E+EI G+ + T + ++
Sbjct: 221 FTITGRGT--------VVTGRAERGTLKINSEVEI-VGI---------RDVQKTTVTGIE 262
Query: 278 AGGQFVEEAYPG---GLVGVGTKLDPYLTKGDLMAGNVVGKPGKLPP 321
+ ++EA+ G GL+ G K D D+ G V+ +PG + P
Sbjct: 263 MFHKQLDEAWAGENCGLLVRGLKRD------DVERGQVLVEPGSITP 303
>sp|P33165|EFTU_BACFR ELONGATION FACTOR TU (EF-TU) >gi|320453|pir||B60663 translation
elongation factor EF-Tu - Bacteroides fragilis
Length = 394
Score = 131 bits (327), Expect = 1e-29
Identities = 111/361 (30%), Positives = 168/361 (45%), Gaps = 72/361 (19%)
Query: 3 EKRKSRQAEVNIGMVGHVDHGKTTLTKALTGVWT-------------DTHSEELRRGITI 49
EK + + VNIG +GHVDHGKTTLT A+T V D EE RGITI
Sbjct: 4 EKFERTKPHVNIGTIGHVDHGKTTLTAAITTVLAKKGLSELRSFDSIDNAPEEKERGITI 63
Query: 50 KIGFADAEIRRCPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMD 109
+ E R + +D PGH + M+ GA+ MD
Sbjct: 64 NTSHVEYETAN-----------------------RHYAHVDCPGHADYVKNMVTGAAQMD 100
Query: 110 GAILVIAANEPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALE----NYRQIKE 165
GAI+V+AA + P PQTREH++ + + +++ NK ++V+ + LE R++
Sbjct: 101 GAIIVVAATDG-PMPQTREHILLARQVNVPKLVVFMNKCDMVEDAEMLELVEMEMRELLS 159
Query: 166 FIEGTVAENAPIIPISALHGAN--------IDVLVKAIEDFIPTPKRDPNKPPKMLVLRS 217
F + +N PII SAL N + L++A++ +IP P RD +KP M V
Sbjct: 160 FYDFD-GDNTPIIQGSALGALNGVEKWEDKVMELMEAVDTWIPLPPRDVDKPFLMPVEDV 218
Query: 218 FDVNKPGTPPEKLVGGVLGGSIVQGKLKVGDEIEIRPGVPYEEHGRIKYEPITTEIVSLQ 277
F + GT V G I G + VGDEIEI G+ G K +T ++
Sbjct: 219 FSITGRGT--------VATGRIETGVIHVGDEIEIL-GL-----GEDKKSVVT----GVE 260
Query: 278 AGGQFVEEAYPGGLVGVGTKLDPYLTKGDLMAGNVVGKPGKLPPVWDSLRLEVHLLERVV 337
+ +++ G VG+ L + K ++ G V+ KPG++ P + EV++L++
Sbjct: 261 MFRKLLDQGEAGDNVGL---LLRGVDKNEIKRGMVLCKPGQIKP-HSKFKAEVYILKKEE 316
Query: 338 G 338
G
Sbjct: 317 G 317
>sp|P13927|EFTU_MYCGE ELONGATION FACTOR TU (EF-TU) >gi|72862|pir||EFYMTG translation
elongation factor EF-Tu - Mycoplasma genitalium
>gi|44306|emb|CAA34483.1| (X16463) elongation factor tu
(AA 1-394) [Mycoplasma capricolum]
>gi|3845045|gb|AAC72471.1| (U39727) elongation factor Tu
(tuf) [Mycoplasma genitalium]
Length = 394
Score = 131 bits (326), Expect = 2e-29
Identities = 120/439 (27%), Positives = 199/439 (44%), Gaps = 81/439 (18%)
Query: 3 EKRKSRQAEVNIGMVGHVDHGKTTLTKALTGVWT-------------DTHSEELRRGITI 49
EK + VN+G +GH+DHGKTTLT A+ V D EE RGITI
Sbjct: 4 EKFDRSKPHVNVGTIGHIDHGKTTLTAAICTVLAKEGKSAATRYDEIDKAPEEKARGITI 63
Query: 50 KIGFADAEIRRCPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMD 109
+ YS+ R + +D PGH + M+ GA+ MD
Sbjct: 64 NSAHVE-----------YSSDK------------RHYAHVDCPGHADYIKNMITGAAQMD 100
Query: 110 GAILVIAANEPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALENY-RQIKEFIE 168
GAILV++A + PQTREH++ + +G +++ NK ++ E+ E ++++ +
Sbjct: 101 GAILVVSATDSV-MPQTREHILLARQVGVPKMVVFLNKCDIASDEEVQELVAEEVRDLLT 159
Query: 169 --GTVAENAPIIPISALHG--------ANIDVLVKAIEDFIPTPKRDPNKPPKMLVLRSF 218
G +N PII SAL A I L+KA++++IPTP R+ +KP + + +
Sbjct: 160 SYGFDGKNTPIIYGSALKALEGDPKWEAKIHDLIKAVDEWIPTPTREVDKPFLLAIEDTM 219
Query: 219 DVNKPGTPPEKLVGGVLGGSIVQGKLKVGDEIEIRPGVPYEEHGRIKYEPITTEIVS-LQ 277
+ GT V+ G + +G+LKVG E+EI + +PI +V+ ++
Sbjct: 220 TITGRGT--------VVTGRVERGELKVGQEVEI-----------VGLKPIRKAVVTGIE 260
Query: 278 AGGQFVEEAYPGGLVGVGTKLDPYLTKGDLMAGNVVGKPGKLPPVWDSLRLEVHLLE--- 334
+ ++ A G GV L + + ++ G V+ KPG + P + E++ L+
Sbjct: 261 MFKKELDSAMAGDNAGV---LLRGVERKEVERGQVLAKPGSIKP-HKKFKAEIYALKKEE 316
Query: 335 --RVVGTEQELKVEPIKRKEVLLLNVGTARTMGLVTGLGKDEIEVKLQIPVCAEPGDRVA 392
R G + + R + ++ A +V I V+L P+ E G + +
Sbjct: 317 GGRHTGFLNGYRPQFYFRTTDVTGSIALAENTEMVLPGDNASITVELIAPIACEKGSKFS 376
Query: 393 ISRQIGSRWRLIGYGIIKE 411
I R+ G R +G G + E
Sbjct: 377 I-REGG---RTVGAGTVTE 391
>pir||S57466 probable translation elongation factor EF-Tu - Toxoplasma gondii
>gi|871517|emb|CAA61254.1| (X88775) predicted elongation
factor Tu [Toxoplasma gondii]
>gi|3377955|emb|CAA72239.1| (Y11431) elongation factor
Tu [Toxoplasma gondii]
Length = 401
Score = 131 bits (326), Expect = 2e-29
Identities = 96/271 (35%), Positives = 138/271 (50%), Gaps = 58/271 (21%)
Query: 6 KSRQAEVNIGMVGHVDHGKTTLTKALTGVWT-------------DTHSEELRRGITIKIG 52
K ++ +NIG +GHVDHGKTTLT A+T V D EE+ RGITIK
Sbjct: 7 KKQKPHINIGTIGHVDHGKTTLTAAITYVLAKNNQAKLKTYKEIDCAPEEIARGITIKTS 66
Query: 53 FADAEIRRCPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMDGAI 112
+ Y T+ VR + ID PGH + M+ GA+ MDGAI
Sbjct: 67 HIE-----------YETA------------VRHYAHIDCPGHADYIKNMITGAAQMDGAI 103
Query: 113 LVIAANEPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALENYR-QIKEFIEG-T 170
LV++A + P PQT+EHL+ + IG NII+ NKI+L+D + LE + +E ++
Sbjct: 104 LVVSAVDG-PMPQTKEHLLLAKQIGISNIIVFLNKIDLIDDNEILELVELETRELLDKYN 162
Query: 171 VAENAPIIPISALHG------ANIDV-----LVKAIEDFIPTPKRDPNKPPKMLVLRSFD 219
+ + PII SAL +NI V L+ A++ +IP PKRD +KP + + F
Sbjct: 163 FSSDTPIITGSALKALDNNLTSNIWVDKIYELLTALDSYIPLPKRDLDKPFLLAIEDIFS 222
Query: 220 VNKPGTPPEKLVGGVLGGSIVQGKLKVGDEI 250
+ GT V+ G I +G +K+GD +
Sbjct: 223 ITGRGT--------VVTGKIERGSIKLGDTV 245
>pir||JC5385 translation elongation factor EF-Tu.1 - Planobispora rosea
>gi|1762982|gb|AAB39605.1| (U67308) elongation factor
Tu1 [Planobispora rosea]
Length = 397
Score = 131 bits (326), Expect = 2e-29
Identities = 102/346 (29%), Positives = 170/346 (48%), Gaps = 41/346 (11%)
Query: 4 KRKSRQAEVNIGMVGHVDHGKTTLTKALTGVWTDTHSEELRRGITIKIGFADAEIRRCPN 63
K + + +NIG +GH+DHGKTTLT A+T V D + E + KI A E R
Sbjct: 5 KFERTKPHMNIGTIGHIDHGKTTLTAAITKVLHDRYPELNKATPFDKIDKAPEEKAR--- 61
Query: 64 CGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMDGAILVIAANEPCPR 123
+ + ++TE R + +D PGH + M+ GA+ MDGAILV+AA P
Sbjct: 62 ----GITISIAHVEYQTE-KRHYAHVDCPGHADYVKNMITGAAQMDGAILVVAATAG-PM 115
Query: 124 PQTREHLMALQIIGQKNIIIAQNKIELVDKEKALENYR-QIKEFIEGT--VAENAPIIPI 180
PQT+EH++ + +G I++A NK ++VD E+ LE +++E + ++ P++ +
Sbjct: 116 PQTKEHVLLARQVGVPYIVVALNKADMVDDEEILELVELEVRELLSAQEFPGDDLPVVRV 175
Query: 181 SALHGA--------NIDVLVKAIEDFIPTPKRDPNKPPKMLVLRSFDVNKPGTPPEKLVG 232
SAL +I L+ A+++ IP P RD +KP M + F + GT
Sbjct: 176 SALKALEGDEKWADSIIELMNAVDENIPEPPRDTDKPFLMPIEDVFSITGRGT------- 228
Query: 233 GVLGGSIVQGKLKVGDEIEIRPGVPYEEHGRIKYEPITTEIVSLQAGGQFVEEAYPGGLV 292
V+ G I +G +KV ++++I IK E TT + S++ + ++E + G
Sbjct: 229 -VVTGRIERGVVKVNEQVDII---------GIKSEKTTTTVTSIEMFNKMLDEGHAGDNA 278
Query: 293 GVGTKLDPYLTKGDLMAGNVVGKPGKLPPVWDSLRLEVHLLERVVG 338
+ L + + + G + KPG P +V++L + G
Sbjct: 279 AL---LLRGIKREQVERGQCIIKPGTTTP-HTEFEAQVYILSKDEG 320
>gi|11496548 elongation factor-Tu [Toxoplasma gondii]
>gi|5231251|gb|AAD41145.1|U87145_14 (U87145) elongation
factor-Tu [Toxoplasma gondii]
Length = 401
Score = 131 bits (326), Expect = 2e-29
Identities = 96/271 (35%), Positives = 138/271 (50%), Gaps = 58/271 (21%)
Query: 6 KSRQAEVNIGMVGHVDHGKTTLTKALTGVWT-------------DTHSEELRRGITIKIG 52
K ++ +NIG +GHVDHGKTTLT A+T V D EE+ RGITIK
Sbjct: 7 KKQKPHINIGTIGHVDHGKTTLTAAITYVLAKNNQAKLKTYKEIDCAPEEIARGITIKTS 66
Query: 53 FADAEIRRCPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMDGAI 112
+ Y T+ VR + ID PGH + M+ GA+ MDGAI
Sbjct: 67 HIE-----------YETA------------VRHYAHIDCPGHADYIKNMITGAAQMDGAI 103
Query: 113 LVIAANEPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALENYR-QIKEFIEG-T 170
LV++A + P PQT+EHL+ + IG NII+ NKI+L+D + LE + +E ++
Sbjct: 104 LVVSAVDG-PMPQTKEHLLLAKQIGISNIIVFLNKIDLIDDNEILELVELETRELLDKYN 162
Query: 171 VAENAPIIPISALHG------ANIDV-----LVKAIEDFIPTPKRDPNKPPKMLVLRSFD 219
+ + PII SAL +NI V L+ A++ +IP PKRD +KP + + F
Sbjct: 163 FSSDTPIITGSALKALDNNLTSNIWVDKIYELLTALDSYIPLPKRDLDKPFLLAIEDIFS 222
Query: 220 VNKPGTPPEKLVGGVLGGSIVQGKLKVGDEI 250
+ GT V+ G I +G +K+GD +
Sbjct: 223 ITGRGT--------VVTGKIERGSIKLGDTV 245
>gi|11467799 translational elongation factor Tu [Nephroselmis olivacea]
>gi|5880728|gb|AAD54821.1|AF137379_44 (AF137379)
translational elongation factor Tu [Nephroselmis
olivacea]
Length = 410
Score = 131 bits (326), Expect = 2e-29
Identities = 108/354 (30%), Positives = 161/354 (44%), Gaps = 80/354 (22%)
Query: 3 EKRKSRQAEVNIGMVGHVDHGKTTLTKALTGVWT--------------DTHSEELRRGIT 48
EK + + VNIG +GHVDHGKTTLT A+T V D+ EE RGIT
Sbjct: 4 EKFERTKPHVNIGTIGHVDHGKTTLTAAITMVMACNTAGSKGKKYEDIDSAPEEKARGIT 63
Query: 49 IKIGFADAEIRRCPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLM 108
I + Y T+ R + +D PGH + M+ GA+ M
Sbjct: 64 INTAHVE-----------YETA------------TRHYAHVDCPGHADYVKNMITGAAQM 100
Query: 109 DGAILVIAANEPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALENYR-QIKEFI 167
DGAILV++ + P PQT+EH++ + +G NI++ NK + VD E+ LE +++E +
Sbjct: 101 DGAILVVSGADG-PMPQTKEHILLAKQVGVPNIVVFLNKQDQVDDEELLELVELEVRETL 159
Query: 168 EG--TVAENAPIIPISAL-------------HGAN-----IDVLVKAIEDFIPTPKRDPN 207
+ P++P SAL G N I L+ A++ +IPTPKRD +
Sbjct: 160 SNYEFPGDEVPVVPGSALLALEAMTENPSLKRGENEWVDKIFALMDAVDQYIPTPKRDTD 219
Query: 208 KPPKMLVLRSFDVNKPGTPPEKLVGGVLGGSIVQGKLKVGDEIEIRPGVPYEEHGRIKYE 267
K M V F + GT V G + +G +K+GD IEI P E
Sbjct: 220 KSFLMAVEDVFSITGRGT--------VATGRVERGSVKLGDTIEIVGLKPTRE------- 264
Query: 268 PITTEIVSLQAGGQFVEEAYPGGLVGVGTKLDPYLTKGDLMAGNVVGKPGKLPP 321
T + L+ + ++++ G VG+ L + K D+ G V+ P + P
Sbjct: 265 ---TTVTGLEMFQKTLDQSVAGDNVGI---LLRGIQKEDIQRGMVLAAPRTITP 312
>sp|P42479|EFTU_STIAU ELONGATION FACTOR TU (EF-TU) >gi|1084018|pir||S55281 translation
elongation factor EF-Tu - Stigmatella aurantiaca
>gi|609256|emb|CAA58029.1| (X82820) EF-Tu protein
[Stigmatella aurantiaca]
Length = 396
Score = 131 bits (325), Expect = 2e-29
Identities = 105/362 (29%), Positives = 171/362 (47%), Gaps = 72/362 (19%)
Query: 3 EKRKSRQAEVNIGMVGHVDHGKTTLTKALTGVWT-------------DTHSEELRRGITI 49
EK + + VNIG +GHVDHGKT+LT A+T V D EE RGITI
Sbjct: 4 EKFERNKPHVNIGTIGHVDHGKTSLTAAITKVLAKTGGATFLAYDQIDKAPEERERGITI 63
Query: 50 KIGFADAEIRRCPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMD 109
+ + + R + +D PGH + M+ GA+ MD
Sbjct: 64 STAHVEYQTKN-----------------------RHYAHVDCPGHADYVKNMITGAAQMD 100
Query: 110 GAILVIAANEPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALENYR-QIKEFIE 168
GAILV++A + P PQTREH++ + +G I++ NK++++D + E ++++ ++
Sbjct: 101 GAILVVSAADG-PMPQTREHILLARQVGVPYIVVFLNKVDMLDDPELRELVEMEVRDLLK 159
Query: 169 --GTVAENAPIIP---ISALHGANIDV-------LVKAIEDFIPTPKRDPNKPPKMLVLR 216
++ PIIP + AL G D+ L+ A++++IPTP+R +KP M V
Sbjct: 160 KYEFPGDSIPIIPGSALKALEGDTSDIGEGAILKLMAAVDEYIPTPQRATDKPFLMPVED 219
Query: 217 SFDVNKPGTPPEKLVGGVLGGSIVQGKLKVGDEIEIRPGVPYEEHGRIKYEPITTEIVSL 276
F + GT V G + +GK+KVG+E+EI P ++ T I +
Sbjct: 220 VFSIAGRGT--------VATGRVERGKIKVGEEVEIVGIRPTQK----------TVITGV 261
Query: 277 QAGGQFVEEAYPGGLVGVGTKLDPYLTKGDLMAGNVVGKPGKLPPVWDSLRLEVHLLERV 336
+ + ++E G +G L L + DL G V+ G + P + +V++L +
Sbjct: 262 EMFRKLLDEGMAGDNIGA---LLRGLKREDLERGQVLANWGSINP-HTKFKAQVYVLSKE 317
Query: 337 VG 338
G
Sbjct: 318 EG 319
>pir||T01400 translation elongation factor EF-Tu precursor, mitochondrial -
Arabidopsis thaliana >gi|3924612|gb|AAC79113.1|
(AF069442) mitochondrial elongation factor Tu
[Arabidopsis thaliana] >gi|4263511|gb|AAD15337.1|
(AC004044) mitochondrial elongation factor Tu
[Arabidopsis thaliana] >gi|7269778|emb|CAB77778.1|
(AL161495) mitochondrial elongation factor Tu
[Arabidopsis thaliana]
Length = 454
Score = 131 bits (325), Expect = 2e-29
Identities = 123/438 (28%), Positives = 196/438 (44%), Gaps = 92/438 (21%)
Query: 12 VNIGMVGHVDHGKTTLTKALTGVWT-------------DTHSEELRRGITIKIGFADAEI 58
VN+G +GHVDHGKTTLT A+T V D EE +RGITI + E
Sbjct: 68 VNVGTIGHVDHGKTTLTAAITKVLAEEGKAKAIAFDEIDKAPEEKKRGITIATAHVEYET 127
Query: 59 RRCPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMDGAILVIAAN 118
+ R + +D PGH + M+ GA+ MDG ILV++
Sbjct: 128 AK-----------------------RHYAHVDCPGHADYVKNMITGAAQMDGGILVVSGP 164
Query: 119 EPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALE----NYRQIKEFIEGTVAEN 174
+ P PQT+EH++ + +G +++ NK+++VD + LE R++ F + ++
Sbjct: 165 DG-PMPQTKEHILLARQVGVPSLVCFLNKVDVVDDPELLELVEMELRELLSFYK-FPGDD 222
Query: 175 APII---PISALHGANIDV-------LVKAIEDFIPTPKRDPNKPPKMLVLRSFDVNKPG 224
PII +SAL G N ++ L+ A++++IP P R +KP M + F + G
Sbjct: 223 IPIIRGSALSALQGTNDEIGRQAILKLMDAVDEYIPDPVRVLDKPFLMPIEDVFSIQGRG 282
Query: 225 TPPEKLVGGVLGGSIVQGKLKVGDEIEIRPGVPYEEHGRIKYEPITTEIVSLQAGGQFVE 284
T V G I QG +KVG+E+EI + E G P+ + + ++ + ++
Sbjct: 283 T--------VATGRIEQGVIKVGEEVEI---LGLREGG----VPLKSTVTGVEMFKKILD 327
Query: 285 EAYPGGLVGVGTKLDPYLTKGDLMAGNVVGKPGKLPPVWDSLRLEVHLLERVVGTEQE-- 342
G VG+ L L + D+ G V+ KPG + E+++L + G
Sbjct: 328 NGQAGDNVGL---LLRGLKREDIQRGMVIAKPGSC-KTYKKFEAEIYVLTKDEGGRHTAF 383
Query: 343 ---------LKVEPIKRKEVLLLNVGTARTMGLVTGLGKDEIEVKLQIPVCAEPGDRVAI 393
L+ I K L NV VT + +L +PV E G R A+
Sbjct: 384 FSNYRPQFYLRTADITGKVELPENVKMVMPGDNVTAV------FELIMPVPLETGQRFAL 437
Query: 394 SRQIGSRWRLIGYGIIKE 411
R+ G R +G G++ +
Sbjct: 438 -REGG---RTVGAGVVSK 451
>sp|P29543|EFT2_STRRA ELONGATION FACTOR TU-2 (EF-TU-2) >gi|280338|pir||S23909 translation
elongation factor EF-Tu.2 - Streptomyces ramocissimus
>gi|581732|emb|CAA47443.1| (X67058) elongation factor
Tu2 [Streptomyces ramocissimus]
Length = 397
Score = 130 bits (324), Expect = 3e-29
Identities = 104/344 (30%), Positives = 166/344 (48%), Gaps = 70/344 (20%)
Query: 4 KRKSRQAEVNIGMVGHVDHGKTTLTKALTGV---------------WTDTHSEELRRGIT 48
K + + VNIG +GH+DHGKTTLT A+T V D EE +RGIT
Sbjct: 5 KFQRTKPHVNIGTIGHIDHGKTTLTAAITKVLHDRFPDLNPFTPFDQIDKAPEERQRGIT 64
Query: 49 IKIGFADAEIRRCPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLM 108
I I + ++TE R + +D PGH + M+ GA+ M
Sbjct: 65 ISIAHVE----------------------YQTE-ARHYAHVDCPGHADYIKNMITGAAQM 101
Query: 109 DGAILVIAANEPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALENYR-QIKEFI 167
DGAILV+AA + P PQT+EH++ + +G I++A NK ++VD E+ LE +++E +
Sbjct: 102 DGAILVVAATDG-PMPQTKEHVLLARQVGVPYIVVALNKTDMVDDEEILELVELEVRELL 160
Query: 168 E--GTVAENAPIIPISALHGANID--------VLVKAIEDFIPTPKRDPNKPPKMLVLRS 217
++ P++ +SAL D L+ A+++F+P P RD ++P M +
Sbjct: 161 TEYEFPGDDVPVVKVSALRALEGDPRWTRSVLELLDAVDEFVPEPVRDVDRPFLMPIEDV 220
Query: 218 FDVNKPGTPPEKLVGGVLGGSIVQGKLKVGDEIEIRPGVPYEEHGRIKYEPITTEIVSLQ 277
F + GT V+ G I +G L V E+EI G+ +E+ R T + ++
Sbjct: 221 FTITGRGT--------VVTGRIERGTLNVNTEVEI-IGI-HEQRTR-------TTVTGIE 263
Query: 278 AGGQFVEEAYPGGLVGVGTKLDPYLTKGDLMAGNVVGKPGKLPP 321
+ ++E G VG+ L + + + G VV +PG + P
Sbjct: 264 MFRKLLDEGRAGENVGL---LLRGVKREQVERGQVVIRPGSVTP 304
>sp|P33169|EFTU_SHEPU ELONGATION FACTOR TU (EF-TU) >gi|320375|pir||E60663 translation
elongation factor EF-Tu - Shewanella putrefaciens
Length = 394
Score = 130 bits (323), Expect = 3e-29
Identities = 109/354 (30%), Positives = 166/354 (46%), Gaps = 76/354 (21%)
Query: 12 VNIGMVGHVDHGKTTLTKALTGVWTDTHS-------------EELRRGITIKIGFADAEI 58
VN+G +GHVDHGKTTLT A++ V T+ EE RGITI +
Sbjct: 13 VNVGTIGHVDHGKTTLTAAISHVLAKTYGGEAKDFSQIDNAPEERERGITINTSHIE--- 69
Query: 59 RRCPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMDGAILVIAAN 118
Y T R + +D PGH + M+ GA+ MDGAILV+A+
Sbjct: 70 --------YDTPS------------RHYAHVDCPGHADYVKNMITGAAQMDGAILVVAST 109
Query: 119 EPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALENYR-QIKEFIE--GTVAENA 175
+ P PQTREH++ + +G II+ NK ++VD E+ LE +++E + ++
Sbjct: 110 DG-PMPQTREHILLSRQVGVPFIIVFMNKCDMVDDEELLELVEMEVRELLSEYDFPGDDL 168
Query: 176 PIIPISALHG--------ANIDVLVKAIEDFIPTPKRDPNKPPKMLVLRSFDVNKPGTPP 227
P+I SAL A I L A++ +IP P+RD +KP + + F ++ GT
Sbjct: 169 PVIQGSALKALEGEPEWEAKILELAAALDSYIPEPQRDIDKPFLLPIEDVFSISGRGT-- 226
Query: 228 EKLVGGVLGGSIVQGKLKVGDEIEIRPGVPYEEHGRIKYEPITTEIVSLQAGGQFVEEAY 287
V+ G + +G ++VGDE+EI GV T ++ + ++E
Sbjct: 227 ------VVTGRVERGIVRVGDEVEI-VGV---------RATTKTTCTGVEMFRKLLDEGR 270
Query: 288 PGGLVGV---GTKLDPYLTKGDLMAGNVVGKPGKLPPVWDSLRLEVHLLERVVG 338
G G+ GTK D D+ G V+ KPG + P + EV++L + G
Sbjct: 271 AGENCGILLRGTKRD------DVERGQVLAKPGSINP-HTTFESEVYVLSKEEG 317
>sp|P56003|EFTU_HELPY ELONGATION FACTOR TU (EF-TU) >gi|7443389|pir||E64670 translation
elongation factor EF-Tu - Helicobacter pylori (strain
26695) >gi|2314366|gb|AAD08250.1| (AE000626) translation
elongation factor EF-Tu (tufB) [Helicobacter pylori
26695]
Length = 399
Score = 130 bits (323), Expect = 3e-29
Identities = 129/444 (29%), Positives = 205/444 (46%), Gaps = 90/444 (20%)
Query: 3 EKRKSRQAEVNIGMVGHVDHGKTTLTKALTGVWT-------------DTHSEELRRGITI 49
EK + VNIG +GHVDHGKTTL+ A++ V + D EE RGITI
Sbjct: 4 EKFNRTKPHVNIGTIGHVDHGKTTLSAAISAVLSLKGLAEMKDYDNIDNAPEEKERGITI 63
Query: 50 KIGFADAEIRRCPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMD 109
+TS + +ETE R + +D PGH + M+ GA+ MD
Sbjct: 64 ------------------ATS----HIEYETE-NRHYAHVDCPGHADYVKNMITGAAQMD 100
Query: 110 GAILVIAANEPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALENYR-QIKEFIE 168
GAILV++A + P PQTREH++ + +G +I++ NK ++VD ++ LE +++E +
Sbjct: 101 GAILVVSAADG-PMPQTREHILLSRQVGVPHIVVFLNKQDMVDDQELLELVEMEVRELLS 159
Query: 169 G--TVAENAPIIPISALH-------------GANIDVLVKAIEDFIPTPKRDPNKPPKML 213
++ PI+ SAL G + L+ ++ +IPTP+RD K M
Sbjct: 160 AYEFPGDDTPIVAGSALRALEEAKAGNVGEWGEKVLKLMAEVDAYIPTPERDTEKTFLMP 219
Query: 214 VLRSFDVNKPGTPPEKLVGGVLGGSIVQGKLKVGDEIEIRPGVPYEEHGRIKYEPITTEI 273
V F + GT V+ G I +G +KVGDE+EI P ++ T +
Sbjct: 220 VEDVFSIAGRGT--------VVTGRIERGVVKVGDEVEIVGIRPTQK----------TTV 261
Query: 274 VSLQAGGQFVEEAYPGGLVGV---GTKLDPYLTKGDLMAGNVVGKPGKLPPVWDSLRLEV 330
++ + +E+ G VGV GTK K ++ G V+ KPG + P E+
Sbjct: 262 TGVEMFRKELEKGEAGDNVGVLLRGTK------KEEVERGMVLCKPGSITP-HKKFEGEI 314
Query: 331 HLLERVVGTEQ-----ELKVEPIKRKEVLLLNVGTARTMGLVTGLGKDEIEVKLQIPVCA 385
++L + G + + R + ++ + +V +I V+L PV
Sbjct: 315 YVLSKEEGGRHTPFFTNYRPQFYVRTTDVTGSITLPEGVEMVMPGDNVKITVELISPVAL 374
Query: 386 EPGDRVAISRQIGSRWRLIGYGII 409
E G + AI R+ G R +G G++
Sbjct: 375 ELGTKFAI-REGG---RTVGAGVV 394
>sp|P48865|EFTU_RICPR ELONGATION FACTOR TU (EF-TU) >gi|7443383|pir||C71672 translation
elongation factor EF-Tu (tuf) RP661 - Rickettsia
prowazekii >gi|3861201|emb|CAA15101.1| (AJ235272)
ELONGATION FACTOR TU (tuf) [Rickettsia prowazekii]
Length = 394
Score = 130 bits (323), Expect = 3e-29
Identities = 107/362 (29%), Positives = 166/362 (45%), Gaps = 76/362 (20%)
Query: 4 KRKSRQAEVNIGMVGHVDHGKTTLTKALTGVWT-------------DTHSEELRRGITIK 50
K + + VNIG +GHVDHGKT+LT A+T + D EE RGITI
Sbjct: 5 KFERTKPHVNIGTIGHVDHGKTSLTAAITIILAKTGGAKATAYDQIDAAPEEKERGITIS 64
Query: 51 IGFADAEIRRCPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMDG 110
+ E + R + +D PGH + M+ GA+ MDG
Sbjct: 65 TAHVEYETQN-----------------------RHYAHVDCPGHADYVKNMITGAAQMDG 101
Query: 111 AILVIAANEPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALENYR-QIKEFIE- 168
AILV++A + P PQTREH++ + +G +++ NK+++VD LE +++E +
Sbjct: 102 AILVVSAADG-PMPQTREHILLAKQVGVPAMVVFLNKVDMVDDPDLLELVEMEVRELLSK 160
Query: 169 -GTVAENAPIIPISALHGAN--------IDVLVKAIEDFIPTPKRDPNKPPKMLVLRSFD 219
G PII SAL I+ L+ A++ +IP P R +KP M + F
Sbjct: 161 YGFPGNEIPIIKGSALQALEGKPEGEKAINELMNAVDSYIPQPIRATDKPFLMPIEDVFS 220
Query: 220 VNKPGTPPEKLVGGVLGGSIVQGKLKVGDEIEIRPGVPYEEHGRIKYEPITTEIVSLQAG 279
++ GT V+ G + G +KVG+EIEI G+ + T ++
Sbjct: 221 ISGRGT--------VVTGRVESGIIKVGEEIEI-VGLKNTQ---------KTTCTGVEMF 262
Query: 280 GQFVEEAYPGGLVGV---GTKLDPYLTKGDLMAGNVVGKPGKLPPVWDSLRLEVHLLERV 336
+ ++E G VG+ GTK + ++ G V+ KPG + P D EV++L +
Sbjct: 263 RKLLDEGQSGDNVGILLRGTK------REEVERGQVLAKPGSIKP-HDKFEAEVYVLSKE 315
Query: 337 VG 338
G
Sbjct: 316 EG 317
>gb|AAD32649.1|AF136604_1 (AF136604) EF-Tu [Coxiella burnetii]
Length = 358
Score = 130 bits (323), Expect = 3e-29
Identities = 103/352 (29%), Positives = 173/352 (48%), Gaps = 52/352 (14%)
Query: 3 EKRKSRQAEVNIGMVGHVDHGKTTLTKALTGVWTDTHSEELRRGITIKIGFADAEIRRCP 62
EK + VN+G +GHVDHGKTTLT ALT V ++ + E + A +I P
Sbjct: 4 EKFVREKPHVNVGTIGHVDHGKTTLTAALTKVLSEKYGGEKK---------AFDQIDNAP 54
Query: 63 NCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMDGAILVIAANEPCP 122
+ + ++++ R + +D PGH + M+ GA+ MDGAILV++A + P
Sbjct: 55 EERARGITIATSHVEYQSD-KRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADG-P 112
Query: 123 RPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALENYR-QIKEFIEG--TVAENAPII- 178
PQTREH++ + +G NI++ NK ++VD ++ LE ++++ + + PII
Sbjct: 113 MPQTREHIVLAKQVGVPNIVVYLNKADMVDDKELLELVEMEVRDLLNSYDFPGDETPIIV 172
Query: 179 --PISALHGANIDV-------LVKAIEDFIPTPKRDPNKPPKMLVLRSFDVNKPGTPPEK 229
+ AL G +V LV+ ++ + P P+R +KP M + F ++ GT
Sbjct: 173 GSALKALEGDKSEVGEPSIIKLVETMDTYFPQPERAIDKPFLMPIEDVFSISGRGT---- 228
Query: 230 LVGGVLGGSIVQGKLKVGDEIEIRPGVPYEEHGRIKYEPITTEIVSLQAGGQFVEEAYPG 289
V+ G + +G +KVGDEIEI G+ + T ++ + ++E G
Sbjct: 229 ----VVTGRVERGIIKVGDEIEI-VGIK---------DTTKTTCTGVEMFRKLLDEGQAG 274
Query: 290 GLVGV---GTKLDPYLTKGDLMAGNVVGKPGKLPPVWDSLRLEVHLLERVVG 338
VG+ GTK + ++ G V+ KPG + P E+++L + G
Sbjct: 275 DNVGILLRGTK------REEVERGQVLAKPGSITP-HKKFEAEIYVLSKEEG 319
>gb|AAG32661.1| (AF264877) translational elongation factor EF-TuM [Zea mays]
Length = 452
Score = 130 bits (323), Expect = 3e-29
Identities = 122/436 (27%), Positives = 192/436 (43%), Gaps = 89/436 (20%)
Query: 12 VNIGMVGHVDHGKTTLTKALTGVWT-------------DTHSEELRRGITIKIGFADAEI 58
V +G +GHVDHGKTTLT A+T V D EE RGITI + E
Sbjct: 67 VTVGTIGHVDHGKTTLTAAITKVLAEAGKAKAVAFDEIDKAPEEKARGITIATAHVEYET 126
Query: 59 RRCPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMDGAILVIAAN 118
+ R + +D PGH + M+ GA+ MDG ILV++A
Sbjct: 127 AK-----------------------RHYAHVDCPGHADYVKNMITGAAQMDGGILVVSAP 163
Query: 119 EPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALE----NYRQIKEFIEGTVAEN 174
+ P PQT+EH++ + +G +++ NK++ VD + LE R++ F + +
Sbjct: 164 DG-PMPQTKEHILLARQVGVPSLVCFLNKVDAVDDPELLELVEMELRELLSFYK-FPGDE 221
Query: 175 APII---PISALHGANIDV-------LVKAIEDFIPTPKRDPNKPPKMLVLRSFDVNKPG 224
PII +SAL G N ++ L+ A++++IP P R +KP M + F + G
Sbjct: 222 IPIIRGSALSALQGNNDEIGKNAILKLMDAVDEYIPDPVRQLDKPFLMPIEDVFSIQGRG 281
Query: 225 TPPEKLVGGVLGGSIVQGKLKVGDEIEIRPGVPYEEHGRIKYEPITTEIVSLQAGGQFVE 284
T V+ G + QG +K G+++EI G + P+ T + ++ + ++
Sbjct: 282 T--------VVTGRVEQGTIKTGEDVEIL--------GLAQTGPLKTTVTGVEMFKKILD 325
Query: 285 EAYPGGLVGVGTKLDPYLTKGDLMAGNVVGKPGKLPPVWDSLRLEVHLLERVVGTEQELK 344
G VG+ L L +GD+ G VV +PG E+++L + G
Sbjct: 326 HGKAGDNVGL---LLRGLKRGDVERGQVVCRPGYSEDC-KKFEAEIYVLTKDEGGRHTAF 381
Query: 345 VEPIKRKEVLLLNVGTARTMGLVTGLGK-------DEIEVKLQI--PVCAEPGDRVAISR 395
V + TA G V LG+ D + + PV EPG R AI R
Sbjct: 382 VTNYSPQ----FYFRTADVTGRVELLGEMKMVLPGDNVTANFDLISPVPLEPGQRFAI-R 436
Query: 396 QIGSRWRLIGYGIIKE 411
+ G R +G G++ +
Sbjct: 437 EGG---RTVGAGVVSK 449
>sp|P48864|EFTU_NEIGO ELONGATION FACTOR TU (EF-TU) >gi|11277703|pir||T10168 translation
elongation factor Tu - Neisseria gonorrhoeae
>gi|7264797|gb|AAB41517.2| (L36380) TufA [Neisseria
gonorrhoeae]
Length = 394
Score = 129 bits (320), Expect = 8e-29
Identities = 129/440 (29%), Positives = 198/440 (44%), Gaps = 87/440 (19%)
Query: 3 EKRKSRQAEVNIGMVGHVDHGKTTLTKALTGVWT-------------DTHSEELRRGITI 49
EK + + VN+G +GHVDHGKTTLT ALT + D EE RGITI
Sbjct: 4 EKFERSKPHVNVGTIGHVDHGKTTLTAALTTILAKKFGGAAKAYDQIDNAPEEKARGITI 63
Query: 50 KIGFADAEIRRCPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMD 109
+ +ETE R + +D PGH + M+ GA+ MD
Sbjct: 64 NTSHVE----------------------YETE-TRHYAHVDCPGHADYVKNMITGAAQMD 100
Query: 110 GAILVIAANEPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALENYR-QIKEFIE 168
GAILV +A + P PQTREH++ + +G II+ NK ++VD + + +I++ +
Sbjct: 101 GAILVCSAADG-PMPQTREHILLARQVGVPYIIVFMNKCDMVDDAELFQLVEMEIRDLLS 159
Query: 169 G--TVAENAPIIPISALHGANIDV--------LVKAIEDFIPTPKRDPNKPPKMLVLRSF 218
++ PI+ SAL D L A++ +IPTP+R +KP + + F
Sbjct: 160 SYDFPGDDCPIVQGSALKALEGDAAYEEKIFELATALDRYIPTPERAVDKPFLLPIEDVF 219
Query: 219 DVNKPGTPPEKLVGGVLGGSIVQGKLKVGDEIEIRPGVPYEEHGRIKYEPITTEIVSLQA 278
++ GT V+ G + +G + VGDEIEI V +E + T ++
Sbjct: 220 SISGRGT--------VVTGRVERGIIHVGDEIEI---VGLKETQK-------TTCTGVEM 261
Query: 279 GGQFVEEAYPGGLVGV---GTKLDPYLTKGDLMAGNVVGKPGKLPPVWDSLRLEVHLLER 335
+ ++E G VGV GTK + D+ G V+ K G + P + EV++L +
Sbjct: 262 FRKLLDEGQAGDNVGVLLRGTK------REDVERGQVLAKRGTITP-HTKFKAEVYVLSK 314
Query: 336 VVGTEQELKVEPIKRKEVLLLNVGTARTMGLVTGL-----GKD-EIEVKLQIPVCAEPGD 389
G R + T+ L G+ G++ I V+L P+ E G
Sbjct: 315 EEG-GPHTPFFANYRPQFYFRTTDVTGTITLEKGVEMVMPGENVTITVELIAPIAMEEGL 373
Query: 390 RVAISRQIGSRWRLIGYGII 409
R AI R+ G R +G G++
Sbjct: 374 RFAI-REGG---RTVGAGVV 389
>gi|11467443 elongation factor Tu [Odontella sinensis]
>gi|1352357|sp|P49462|EFTU_ODOSI ELONGATION FACTOR TU
(EF-TU) >gi|7443387|pir||S78248 translation elongation
factor EF-Tu - Odontella sinensis chloroplast
>gi|1185138|emb|CAA91621.1| (Z67753) elongation factor
Tu [Odontella sinensis]
Length = 409
Score = 128 bits (319), Expect = 1e-28
Identities = 132/457 (28%), Positives = 198/457 (42%), Gaps = 102/457 (22%)
Query: 3 EKRKSRQAEVNIGMVGHVDHGKTTLTKALTGVWT-------------DTHSEELRRGITI 49
EK + + VNIG +GHVDHGKTTLT A+T D EE RGITI
Sbjct: 4 EKFERTKPHVNIGTIGHVDHGKTTLTAAITATLALDGNAKVKDYPDIDGAPEERARGITI 63
Query: 50 KIGFADAEIRRCPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMD 109
+ E GH + +D PGH + M+ GA+ MD
Sbjct: 64 NTAHVEYETEN----------------GH-------YAHVDCPGHADYVKNMITGAAQMD 100
Query: 110 GAILVIAANEPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALENYR-QIKEFIE 168
GAILV++A + P PQTREH++ + +G +I++ NK + VD + LE +++E +
Sbjct: 101 GAILVVSAADG-PMPQTREHILLSKQVGVPDIVVFLNKEDQVDDAELLELVELEVRELLS 159
Query: 169 G--------TVAENAPIIPISAL-------HGAN-----IDVLVKAIEDFIPTPKRDPNK 208
A + + I A+ G N I L+ A++++IPTP+RD K
Sbjct: 160 AYDFQVMTFRFAPGSALQAIEAISSNPAIKRGDNPWVDKIFALMDAVDEYIPTPERDIEK 219
Query: 209 PPKMLVLRSFDVNKPGTPPEKLVGGVLGGSIVQGKLKVGDEIEIRPGVPYEEHGRIKYEP 268
M + F + GT V G I +G +KVGD +EI GV +
Sbjct: 220 TFLMAIEDVFSITGRGT--------VATGRIERGVVKVGDTVEI-VGVG---------DT 261
Query: 269 ITTEIVSLQAGGQFVEEAYPGGLVGVGTKLDPYLTKGDLMAGNVVGKPGKLPPVWDSLRL 328
TT I ++ + ++E + G VG+ L +T+ D+ AG V+ +PG + P +
Sbjct: 262 QTTTITGIEMFQKTLDEGFAGDNVGI---LLRGVTREDIEAGMVLSEPGTITP-HTNFES 317
Query: 329 EVHLLERVVGTEQELKVEPIKRKEVLLLNVGTARTMGLVTGLGKDE-------------- 374
EV++L + G P V T G +T D+
Sbjct: 318 EVYVLTKDEGGRH----TPFFTGYRPQFYVRTTDVTGAITQFTADDGSIVEMVMPGDRIK 373
Query: 375 IEVKLQIPVCAEPGDRVAISRQIGSRWRLIGYGIIKE 411
+ +L PV E G R AI R+ G R IG G++ +
Sbjct: 374 MTAELIYPVAIEEGMRFAI-REGG---RTIGAGVVSK 406
>sp|P18906|EFTU_MYCGA ELONGATION FACTOR TU (EF-TU) >gi|72863|pir||EFYMTS translation
elongation factor EF-Tu - Mycoplasma gallisepticum
>gi|44293|emb|CAA34482.1| (X16462) elongation factor tu
(AA 1-394) [Mycoplasma capricolum]
Length = 394
Score = 128 bits (318), Expect = 1e-28
Identities = 103/363 (28%), Positives = 173/363 (47%), Gaps = 71/363 (19%)
Query: 1 MGEKRKSR-QAEVNIGMVGHVDHGKTTLTKALTGVWT-------------DTHSEELRRG 46
M ++R R + VNIG +GH+DHGKTTLT A+ V + D EE RG
Sbjct: 1 MAKERFDRSKPHVNIGTIGHIDHGKTTLTAAICTVLSKAGTSEAKKYDEIDAAPEEKARG 60
Query: 47 ITIKIGFADAEIRRCPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGAS 106
ITI + Y+T R + +D PGH + M+ GA+
Sbjct: 61 ITINTAHVE-----------YATQN------------RHYAHVDCPGHADYVKNMITGAA 97
Query: 107 LMDGAILVIAANEPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALENYR-QIKE 165
MDG ILV++A + P PQTREH++ + +G +++ NK ++ D + E ++++
Sbjct: 98 QMDGGILVVSATDG-PMPQTREHILLARQVGVPKMVVFLNKCDVADDPEMQELVEMEVRD 156
Query: 166 FIE--GTVAENAPIIPISALHGAN--------IDVLVKAIEDFIPTPKRDPNKPPKMLVL 215
++ G +N P+I SAL N I L+KA++++IPTP R+ +KP + +
Sbjct: 157 LLKSYGFDGDNTPVIRGSALGALNGEPAWEEKIHELMKAVDEYIPTPDREVDKPFLLPIE 216
Query: 216 RSFDVNKPGTPPEKLVGGVLGGSIVQGKLKVGDEIEIRPGVPYEEHGRIKYEPITTEIVS 275
+ + GT V+ G + +G+LKVG+E+EI G+ + +
Sbjct: 217 DTMTITGRGT--------VVTGRVERGQLKVGEEVEI-VGIT---------DTRKVVVTG 258
Query: 276 LQAGGQFVEEAYPGGLVGVGTKLDPYLTKGDLMAGNVVGKPGKLPPVWDSLRLEVHLLER 335
++ + ++ A G G+ L + + D+ G V+ KPG + P R E++ L++
Sbjct: 259 IEMFRKELDAAMAGDNAGI---LLRGVDRKDVQRGQVLAKPGSITP-HKKFRAEIYALKK 314
Query: 336 VVG 338
G
Sbjct: 315 DEG 317
>pir||S57945 probable translation elongation factor EF-Tu - Eimeria tenella
>gi|899262|emb|CAA61615.1| (X89446) predicted elongation
factor Tu [Eimeria tenella] >gi|3378155|emb|CAA73000.1|
(Y12332) elongation factor Tu [Eimeria tenella]
Length = 403
Score = 128 bits (318), Expect = 1e-28
Identities = 128/441 (29%), Positives = 196/441 (44%), Gaps = 92/441 (20%)
Query: 9 QAEVNIGMVGHVDHGKTTLTKALTGVWT-------------DTHSEELRRGITIKIGFAD 55
+ +NIG +GHVDHGKTTLT A+T + D+ EE RGITI +
Sbjct: 10 KTHLNIGTIGHVDHGKTTLTAAITSYLSKINNTKAKSYSEIDSAPEEKARGITINTSHIE 69
Query: 56 AEIRRCPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMDGAILVI 115
E +R + ID PGH + M+ GA+ MDGAILV+
Sbjct: 70 YETN-----------------------LRHYAHIDCPGHADYIKNMITGAAQMDGAILVV 106
Query: 116 AANEPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALE----NYRQIKEFIEGTV 171
+A + P PQTREHL+ + +G NII+ NKI++V+ + LE R++ + E
Sbjct: 107 SATDG-PMPQTREHLLLAKQVGVPNIIVFLNKIDMVEDNELLELVELEVRELLDIYEYN- 164
Query: 172 AENAPIIPISALHG--------------ANIDVLVKAIEDFIPTPKRDPNKPPKMLVLRS 217
++ II SAL N+ L++A++ IP PKRD NKP + +
Sbjct: 165 GDSTSIIKGSALKALEYIEKNDLNNKWVKNLKNLIEALDKSIPEPKRDINKPFLLSIEDI 224
Query: 218 FDVNKPGTPPEKLVGGVLGGSIVQGKLKVGDEIEIRPGVPYEEHGRIKYEPITTEIVSLQ 277
F + GT V+ G I +GK+K+ D ++I +K TT + ++
Sbjct: 225 FSITGRGT--------VVTGKIERGKVKLNDTVDIL------GFNLLK----TTTVTGIE 266
Query: 278 AGGQFVEEAYPGGLVGVGTKLDPYLTKGDLMAGNVVGKPGKLPPVWDSLRLEVHLLERVV 337
+ + A G VG+ L + K ++ G V+ KP + + EV++L
Sbjct: 267 MFQKILNTAEAGDNVGI---LLRGIQKNEVRRGMVLAKPLSI-LTYSKFDAEVYILSSSE 322
Query: 338 GTEQELKVEPIKRKEVLLLNVGTARTMGLVTGLGKDEI-----EVKLQI----PVCAEPG 388
G ++ E K + T+ + K E+ +VKL+I + E G
Sbjct: 323 GGRKKPFFEGYK-PQFYFYTTDVTGTIEFLRNPEKPEMILPGDKVKLRISLMYSIALEKG 381
Query: 389 DRVAISRQIGSRWRLIGYGII 409
R AI R+ G + IG GII
Sbjct: 382 MRFAI-REGG---KTIGAGII 398
>sp|P42474|EFTU_CYTLY ELONGATION FACTOR TU (EF-TU) >gi|2147348|pir||I40828 translation
elongation factor EF-Tu - Cytophaga lytica
>gi|560821|emb|CAA54324.1| (X77035) elongation factor Tu
[Cytophaga lytica]
Length = 395
Score = 127 bits (317), Expect = 2e-28
Identities = 106/352 (30%), Positives = 162/352 (45%), Gaps = 71/352 (20%)
Query: 12 VNIGMVGHVDHGKTTLTKALTGVWT-------------DTHSEELRRGITIKIGFADAEI 58
+NIG +GHVDHGKTTLT A+T V D EE RGITI +
Sbjct: 13 LNIGTIGHVDHGKTTLTAAITTVLANAGLSELRSFDSIDNAPEEKERGITINTSHVE--- 69
Query: 59 RRCPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMDGAILVIAAN 118
YST+ R + +D PGH + M+ GA+ MDGAILV+AA
Sbjct: 70 --------YSTAN------------RHYAHVDCPGHADYVKNMVTGAAQMDGAILVVAAT 109
Query: 119 EPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALE----NYRQIKEFIEGTVAEN 174
+ P PQTREH++ + +G I++ NK+++VD E+ LE R++ F E +N
Sbjct: 110 DG-PMPQTREHILLGRQVGIPRIVVFLNKVDMVDDEELLELVEMEVRELLSFYEYD-GDN 167
Query: 175 APIIPISALHGAN--------IDVLVKAIEDFIPTPKRDPNKPPKMLVLRSFDVNKPGTP 226
P++ SAL N + L++A++++I PKRD +K M V F + GT
Sbjct: 168 GPVVSGSALGALNGEQKWVDTVMELMEAVDNWIELPKRDVDKDFLMPVEDVFTITGRGT- 226
Query: 227 PEKLVGGVLGGSIVQGKLKVGDEIEIRPGVPYEEHGRIKYEPITTEIVSLQAGGQFVEEA 286
V G I G GD ++I + + + + I ++ + ++
Sbjct: 227 -------VATGRIETGVANTGDAVDII---------GMGADKLASTITGVEMFRKILDRG 270
Query: 287 YPGGLVGVGTKLDPYLTKGDLMAGNVVGKPGKLPPVWDSLRLEVHLLERVVG 338
G VG+ L + K + G V+ KPG + P EV++L++ G
Sbjct: 271 EAGDNVGI---LLRGIEKSQISRGMVICKPGSVKP-HSKFEAEVYILKKEEG 318
>sp|P18668|EFTU_SYNP6 ELONGATION FACTOR TU (EF-TU) >gi|79628|pir||S04430 translation
elongation factor EF-Tu.A - Synechococcus sp
>gi|1405433|emb|CAA35496.1| (X17442) tufA [Synechococcus
PCC6301]
Length = 409
Score = 127 bits (316), Expect = 2e-28
Identities = 130/456 (28%), Positives = 204/456 (44%), Gaps = 102/456 (22%)
Query: 4 KRKSRQAEVNIGMVGHVDHGKTTLTKALTGVWT-------------DTHSEELRRGITIK 50
K + + NIG +GHVDHGKTTLT A+T V D EE RGITI
Sbjct: 5 KFERTKPHANIGTIGHVDHGKTTLTAAITTVLAKAGMAKARAYADIDAAPEEKARGITIN 64
Query: 51 IGFADAEIRRCPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMDG 110
+ E R + +D PGH + M+ GA+ MDG
Sbjct: 65 TAHVEYETGN-----------------------RHYAHVDCPGHADYVKNMITGAAQMDG 101
Query: 111 AILVIAANEPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALENYR-QIKEFIEG 169
AILV++A + P PQTREH++ + +G NI++ NK ++VD + LE +++E +
Sbjct: 102 AILVVSAADG-PMPQTREHILLAKQVGVPNIVVFLNKEDMVDDAELLELVELEVRELLSS 160
Query: 170 --TVAENAPIIPISALH-------GAN--------IDVLVKAIED---FIPTPKRDPNKP 209
++ PI+ SAL GA+ +D ++K +E+ +IPTP+R+ ++P
Sbjct: 161 YDFPGDDIPIVAGSALQALEAIQGGASGQKGDNPWVDKILKLMEEVDAYIPTPEREVDRP 220
Query: 210 PKMLVLRSFDVNKPGTPPEKLVGGVLGGSIVQGKLKVGDEIEIRPGVPYEEHGRIKYEPI 269
M V F + GT V G I +G +KVG+ IEI G+ +
Sbjct: 221 FLMAVEDVFTITGRGT--------VATGRIERGSVKVGETIEI-VGL---------RDTR 262
Query: 270 TTEIVSLQAGGQFVEEAYPGGLVGVGTKLDPYLTKGDLMAGNVVGKPGKLPPVWDSLRLE 329
+T + ++ + ++E G VG+ L + K D+ G V+ KPG + P E
Sbjct: 263 STTVTGVEMFQKTLDEGLAGDNVGL---LLRGIQKTDIERGMVLAKPGSITP-HTKFESE 318
Query: 330 VHLLERVVGTEQELKVEPIKRKEVLLLNVGTARTMGLVTGLGKDE--------------I 375
V++L++ G + P R + V T G ++ D+ +
Sbjct: 319 VYVLKKEEG-GRHTPFFPGYRPQ---FYVRTTDVTGAISDFTADDGSAAEMVIPGDRIKM 374
Query: 376 EVKLQIPVCAEPGDRVAISRQIGSRWRLIGYGIIKE 411
V+L P+ E G R AI R+ G R IG G++ +
Sbjct: 375 TVELINPIAIEQGMRFAI-REGG---RTIGAGVVSK 406
>sp|P50068|EFTU_UREPA ELONGATION FACTOR TU (EF-TU) >gi|2127672|pir||S62726 translation
elongation factor tu (EF-tu) UU522 [similarity] -
Ureaplasma urealyticum >gi|498791|emb|CAA84029.1|
(Z34275) elongation factor Tu [Ureaplasma urealyticum]
>gi|6899525|gb|AAF30935.1|AE002151_1 (AE002151)
translation elongation factor tu (EF-tu) [Ureaplasma
urealyticum]
Length = 394
Score = 127 bits (316), Expect = 2e-28
Identities = 120/425 (28%), Positives = 206/425 (48%), Gaps = 59/425 (13%)
Query: 4 KRKSRQAEVNIGMVGHVDHGKTTLTKALTGVWTDTHSEELRRGITIKIGFADAEIRRCPN 63
K + + VNIG +GHVDHGKTTLT A++ V ++G I +AD + + P
Sbjct: 5 KFERTKPHVNIGTIGHVDHGKTTLTAAISTVLA-------KKGQAIAQSYADVD--KTPE 55
Query: 64 CGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMDGAILVIAANEPCPR 123
+ + +ET+ R + +D PGH + M+ GA+ MDGAILVIAA++
Sbjct: 56 ERERGITINASHVEYETK-TRHYAHVDCPGHADYVKNMITGAAQMDGAILVIAASDGV-M 113
Query: 124 PQTREHLMALQIIGQKNIIIAQNKIELV---DKEKALENYRQIKEFIE--GTVAENAPII 178
QT+EH++ + +G I++ NK + + D + +E +++E + G +N P+I
Sbjct: 114 AQTKEHILLARQVGVPKIVVFLNKCDFMTDPDMQDLVE--MEVRELLSKYGFDGDNTPVI 171
Query: 179 ---PISALHG-----ANIDVLVKAIEDFIPTPKRDPNKPPKMLVLRSFDVNKPGTPPEKL 230
+ AL G A ID L+ A++ +IP P+R +KP + + F ++ GT
Sbjct: 172 RGSGLKALEGDPVWEAKIDELMDAVDSWIPLPERSTDKPFLLAIEDVFTISGRGT----- 226
Query: 231 VGGVLGGSIVQGKLKVGDEIEIRPGVPYEEHGRIKYEPITTEIVSLQAGGQFVEEAYPGG 290
V+ G + +G LKV DE+EI V ++ + T + ++ + +++A G
Sbjct: 227 ---VVTGRVERGVLKVNDEVEI---VGLKDTQK-------TVVTGIEMFRKSLDQAEAGD 273
Query: 291 LVGVGTKLDPYLTKGDLMAGNVVGKPGKLPPVWDSLRLEVHLLERVVGTEQELKVEPIKR 350
G+ L + K D+ G V+ KPG + P + +V++L++ G V R
Sbjct: 274 NAGI---LLRGIKKEDVERGQVLVKPGSIKP-HRTFTAKVYILKKEEGGRHTPIVSGY-R 328
Query: 351 KEVLLLNVGTARTMGLVTGL-----GKD-EIEVKLQIPVCAEPGDRVAISRQIGSRWRLI 404
+ + L G+ G D E+ V+L PV E G + +I R+ G + +
Sbjct: 329 PQFYFRTTDVTGAISLPAGVDLVMPGDDVEMTVELIAPVAIEDGSKFSI-REGG---KTV 384
Query: 405 GYGII 409
G+G +
Sbjct: 385 GHGSV 389
>sp|P43926|EFTU_HAEIN ELONGATION FACTOR TU (EF-TU) >gi|1074052|pir||E64078 translation
elongation factor EF-Tu - Haemophilus influenzae (strain
Rd KW20) >gi|1573560|gb|AAC22236.1| (U32739) elongation
factor Tu (tufA) [Haemophilus influenzae Rd]
>gi|1573634|gb|AAC22292.1| (U32746) elongation factor Tu
(tufB) [Haemophilus influenzae Rd]
Length = 394
Score = 127 bits (316), Expect = 2e-28
Identities = 107/363 (29%), Positives = 168/363 (45%), Gaps = 76/363 (20%)
Query: 3 EKRKSRQAEVNIGMVGHVDHGKTTLTKALTGVWT-------------DTHSEELRRGITI 49
EK + + VN+G +GHVDHGKTTLT A+T V D EE RGITI
Sbjct: 4 EKFERTKPHVNVGTIGHVDHGKTTLTAAITTVLAKHYGGAARAFDQIDNAPEEKARGITI 63
Query: 50 KIGFADAEIRRCPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMD 109
+ Y T R + +D PGH + M+ GA+ MD
Sbjct: 64 NTSHVE-----------YDTP------------TRHYAHVDCPGHADYVKNMITGAAQMD 100
Query: 110 GAILVIAANEPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALENYR-QIKEFIE 168
GAILV+AA + P PQTREH++ + +G II+ NK ++VD E+ LE +++E +
Sbjct: 101 GAILVVAATDG-PMPQTREHILLGRQVGVPYIIVFLNKCDMVDDEELLELVEMEVRELLS 159
Query: 169 --GTVAENAPIIPISALHGAN--------IDVLVKAIEDFIPTPKRDPNKPPKMLVLRSF 218
++ PI+ SAL N I L ++ +IP P+R ++P + + F
Sbjct: 160 QYDFPGDDTPIVRGSALQALNGVAEWEEKILELANHLDTYIPEPERAIDQPFLLPIEDVF 219
Query: 219 DVNKPGTPPEKLVGGVLGGSIVQGKLKVGDEIEIRPGVPYEEHGRIKYEPITTEIVSLQA 278
++ GT V+ G + +G ++ GDE+EI G+ + T + ++
Sbjct: 220 SISGRGT--------VVTGRVERGIIRTGDEVEI-VGIK---------DTAKTTVTGVEM 261
Query: 279 GGQFVEEAYPGGLVGV---GTKLDPYLTKGDLMAGNVVGKPGKLPPVWDSLRLEVHLLER 335
+ ++E G +G GTK + ++ G V+ KPG + P D EV++L +
Sbjct: 262 FRKLLDEGRAGENIGALLRGTK------REEIERGQVLAKPGSITPHTD-FESEVYVLSK 314
Query: 336 VVG 338
G
Sbjct: 315 DEG 317
>sp|P21694|EFTU_SALTY ELONGATION FACTOR TU (EF-TU) >gi|96717|pir||S13561 translation
elongation factor EF-Tu.B - Salmonella typhimurium
>gi|47948|emb|CAA38913.1| (X55117) elongation factor Tu
[Salmonella typhimurium] >gi|581776|emb|CAA38912.1|
(X55116) elongation factor Tu [Salmonella typhimurium]
>gi|6960353|gb|AAF33513.1| (AF170176) Salmonella
typhimurium translation elongation factors TU (EF-TU)
(SW:P21694); contains similarity to PFam domain PF00009
(GTP_EFTU, Score=541.8 E=4.6e-159, N=1 [Salmonella
typhimurium LT2]
Length = 394
Score = 127 bits (315), Expect = 3e-28
Identities = 108/360 (30%), Positives = 168/360 (46%), Gaps = 70/360 (19%)
Query: 3 EKRKSRQAEVNIGMVGHVDHGKTTLTKALTGVWTDTHS-------------EELRRGITI 49
EK + + VN+G +GHVDHGKTTLT A+T V T+ EE RGITI
Sbjct: 4 EKFERTKPHVNVGTIGHVDHGKTTLTAAITTVLAKTYGGAARAFDQIDNAPEEKARGITI 63
Query: 50 KIGFADAEIRRCPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMD 109
+ Y T R + +D PGH + M+ GA+ MD
Sbjct: 64 NTSHVE-----------YDTP------------TRHYAHVDCPGHADYVKNMITGAAQMD 100
Query: 110 GAILVIAANEPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALENYR-QIKEFIE 168
GAILV+AA + P PQTREH++ + +G II+ NK ++VD E+ LE +++E +
Sbjct: 101 GAILVVAATDG-PMPQTREHILLGRQVGVPYIIVFLNKCDMVDDEELLELVEMEVRELLS 159
Query: 169 --GTVAENAPIIPISALHG--------ANIDVLVKAIEDFIPTPKRDPNKPPKMLVLRSF 218
++ PI+ SAL A I L ++ +IP P+R +KP + + F
Sbjct: 160 QYDFPGDDTPIVRGSALKALEGDAEWEAKIIELAGFLDSYIPEPERAIDKPFLLPIEDVF 219
Query: 219 DVNKPGTPPEKLVGGVLGGSIVQGKLKVGDEIEIRPGVPYEEHGRIKYEPITTEIVSLQA 278
++ GT V+ G + +G +KVG+E+EI G+ E + ++
Sbjct: 220 SISGRGT--------VVTGRVERGIIKVGEEVEI-VGIK---------ETQKSTCTGVEM 261
Query: 279 GGQFVEEAYPGGLVGVGTKLDPYLTKGDLMAGNVVGKPGKLPPVWDSLRLEVHLLERVVG 338
+ ++E G VGV L + + ++ G V+ KPG + P EV++L + G
Sbjct: 262 FRKLLDEGRAGENVGV---LLRGIKREEIERGQVLAKPGTIKP-HTKFESEVYILSKDEG 317
>pir||S13560 translation elongation factor EF-Tu.A - Salmonella typhimurium
Length = 394
Score = 127 bits (315), Expect = 3e-28
Identities = 108/360 (30%), Positives = 168/360 (46%), Gaps = 70/360 (19%)
Query: 3 EKRKSRQAEVNIGMVGHVDHGKTTLTKALTGVWTDTHS-------------EELRRGITI 49
EK + + VN+G +GHVDHGKTTLT A+T V T+ EE RGITI
Sbjct: 4 EKFERTKPHVNVGTIGHVDHGKTTLTAAITTVLAKTYGGAARAFDQIDNAPEEKARGITI 63
Query: 50 KIGFADAEIRRCPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMD 109
+ Y T R + +D PGH + M+ GA+ MD
Sbjct: 64 NTSHVE-----------YDTP------------TRHYAHVDCPGHADYVKNMITGAAQMD 100
Query: 110 GAILVIAANEPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALENYR-QIKEFIE 168
GAILV+AA + P PQTREH++ + +G II+ NK ++VD E+ LE +++E +
Sbjct: 101 GAILVVAATDG-PMPQTREHILLGRQVGVPYIIVFLNKCDMVDDEELLELVEMEVRELLS 159
Query: 169 --GTVAENAPIIPISALHG--------ANIDVLVKAIEDFIPTPKRDPNKPPKMLVLRSF 218
++ PI+ SAL A I L ++ +IP P+R +KP + + F
Sbjct: 160 QYDFPGDDTPIVRGSALKALEGDAEWEAKIIELAGFLDSYIPEPERAIDKPFLLPIEDVF 219
Query: 219 DVNKPGTPPEKLVGGVLGGSIVQGKLKVGDEIEIRPGVPYEEHGRIKYEPITTEIVSLQA 278
++ GT V+ G + +G +KVG+E+EI G+ E + ++
Sbjct: 220 SISGRGT--------VVTGRVERGIIKVGEEVEI-VGIK---------ETQKSTCTGVEM 261
Query: 279 GGQFVEEAYPGGLVGVGTKLDPYLTKGDLMAGNVVGKPGKLPPVWDSLRLEVHLLERVVG 338
+ ++E G VGV L + + ++ G V+ KPG + P EV++L + G
Sbjct: 262 FRKLLDEGRAGENVGV---LLRGIKREEIERGQVLAKPGTIKP-HTKFESEVYILSKDEG 317
>sp|P33171|EFTU_SYNP7 ELONGATION FACTOR TU (EF-TU)
Length = 409
Score = 127 bits (315), Expect = 3e-28
Identities = 130/456 (28%), Positives = 204/456 (44%), Gaps = 102/456 (22%)
Query: 4 KRKSRQAEVNIGMVGHVDHGKTTLTKALTGVWT-------------DTHSEELRRGITIK 50
K + + NIG +GHVDHGKTTLT A+T V D EE RGITI
Sbjct: 5 KFERTKPHANIGTIGHVDHGKTTLTAAITTVLAKAGMAKARAYADIDAAPEEKARGITIN 64
Query: 51 IGFADAEIRRCPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMDG 110
+ E R + +D PGH + M+ GA+ MDG
Sbjct: 65 TAHVEYETGN-----------------------RHYAHVDCPGHADYVKNMITGAAQMDG 101
Query: 111 AILVIAANEPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALENYR-QIKEFIEG 169
AILV++A + P PQTREH++ + +G NI++ NK ++VD + LE +++E +
Sbjct: 102 AILVVSAADG-PMPQTREHILLAKQVGVPNIVVFLNKEDMVDDAELLELVELEVRELLSS 160
Query: 170 --TVAENAPIIPISALH-------GAN--------IDVLVKAIED---FIPTPKRDPNKP 209
++ PI+ SAL GA+ +D ++K +E+ +IPTP+R+ ++P
Sbjct: 161 YDFPGDDIPIVAGSALQALEAIQGGASGQKGDNPWVDKILKLMEEVDAYIPTPEREVDRP 220
Query: 210 PKMLVLRSFDVNKPGTPPEKLVGGVLGGSIVQGKLKVGDEIEIRPGVPYEEHGRIKYEPI 269
M V F + GT V G I +G +KVG+ IEI G+ +
Sbjct: 221 FLMAVEDVFTITGRGT--------VATGRIERGSVKVGETIEI-VGL---------RDTR 262
Query: 270 TTEIVSLQAGGQFVEEAYPGGLVGVGTKLDPYLTKGDLMAGNVVGKPGKLPPVWDSLRLE 329
+T + ++ + ++E G VG+ L + K D+ G V+ KPG + P E
Sbjct: 263 STTVTGVEMFQKTLDEGLAGDNVGL---LLRGIQKTDIERGMVLAKPGSITP-HTKFESE 318
Query: 330 VHLLERVVGTEQELKVEPIKRKEVLLLNVGTARTMGLVTGLGKDE--------------I 375
V++L++ G + P R + V T G ++ D+ +
Sbjct: 319 VYVLKKDEG-GRHTPFFPGYRPQ---FYVRTTDVTGAISDFTADDGSAAEMVIPGDRIKM 374
Query: 376 EVKLQIPVCAEPGDRVAISRQIGSRWRLIGYGIIKE 411
V+L P+ E G R AI R+ G R IG G++ +
Sbjct: 375 TVELINPIAIEQGMRFAI-REGG---RTIGAGVVSK 406
>sp|P42480|EFTU_TAXOC ELONGATION FACTOR TU (EF-TU) >gi|587581|emb|CAA54325.1| (X77036)
elongation factor Tu [Taxeobacter ocellatus]
Length = 395
Score = 127 bits (315), Expect = 3e-28
Identities = 104/352 (29%), Positives = 164/352 (46%), Gaps = 71/352 (20%)
Query: 12 VNIGMVGHVDHGKTTLTKALTGVWT-------------DTHSEELRRGITIKIGFADAEI 58
VNIG +GHVDHGKTTLT A+T V D EE RGITI +
Sbjct: 13 VNIGTIGHVDHGKTTLTAAITTVLANKGLAAKRDFSSIDNAPEEKERGITINTAHVE--- 69
Query: 59 RRCPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMDGAILVIAAN 118
YST+ R + +D PGH + M+ GA+ MDGAILV+AA
Sbjct: 70 --------YSTAN------------RHYAHVDCPGHADYVKNMVTGAAQMDGAILVVAAT 109
Query: 119 EPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALE----NYRQIKEFIEGTVAEN 174
+ P PQTREH++ + +G +++ NK+++VD + LE R++ F + +N
Sbjct: 110 DG-PMPQTREHILLARQVGVPQLVVFMNKVDMVDDPELLELVEMEIRELLSFYDFD-GDN 167
Query: 175 APIIPISALHGAN--------IDVLVKAIEDFIPTPKRDPNKPPKMLVLRSFDVNKPGTP 226
P++ SAL G N I+ L+ +++++IP P R ++P M V F + GT
Sbjct: 168 IPVVQGSALGGLNGDAKWVGTIEQLMDSVDNWIPIPPRLTDQPFLMPVEDVFSITGRGT- 226
Query: 227 PEKLVGGVLGGSIVQGKLKVGDEIEIRPGVPYEEHGRIKYEPITTEIVSLQAGGQFVEEA 286
V G I +G + G+ +EI + E + + + ++ + ++
Sbjct: 227 -------VATGRIERGVINSGEPVEIL---------GMGAENLKSTVTGVEMFRKILDRG 270
Query: 287 YPGGLVGVGTKLDPYLTKGDLMAGNVVGKPGKLPPVWDSLRLEVHLLERVVG 338
G VG+ L + K + G V+ KPG + P + EV++L + G
Sbjct: 271 EAGDNVGL---LLRGIEKEAIRRGMVICKPGSVTP-HKKFKAEVYVLSKEEG 318
>emb|CAA90881.1| (Z54170) elongation factor EF-Tu [Rickettsia prowazekii]
Length = 394
Score = 127 bits (315), Expect = 3e-28
Identities = 106/362 (29%), Positives = 165/362 (45%), Gaps = 76/362 (20%)
Query: 4 KRKSRQAEVNIGMVGHVDHGKTTLTKALTGVWT-------------DTHSEELRRGITIK 50
K + + VNIG +GHVDHGKT+LT A+T + D EE RGITI
Sbjct: 5 KFERTKPHVNIGTIGHVDHGKTSLTAAITIILAKTGGAKATAYDQIDAAPEEKERGITIS 64
Query: 51 IGFADAEIRRCPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMDG 110
+ E + R + +D PGH + M+ GA+ MDG
Sbjct: 65 TAHVEYETQN-----------------------RHYAHVDCPGHADYVKNMITGAAQMDG 101
Query: 111 AILVIAANEPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALENYR-QIKEFIE- 168
AILV++A + P PQTREH++ + +G +++ NK+++VD LE +++E +
Sbjct: 102 AILVVSAADG-PMPQTREHILLAKQVGVPAMVVFLNKVDMVDDPDLLELVEMEVRELLSK 160
Query: 169 -GTVAENAPIIPISALHGAN--------IDVLVKAIEDFIPTPKRDPNKPPKMLVLRSFD 219
G PII SAL I+ L+ A++ +IP P +KP M + F
Sbjct: 161 YGFPGNEIPIIKGSALQALEGKPEGEKAINELMNAVDTYIPQPIELQDKPFLMPIEDVFS 220
Query: 220 VNKPGTPPEKLVGGVLGGSIVQGKLKVGDEIEIRPGVPYEEHGRIKYEPITTEIVSLQAG 279
++ GT V+ G + G +KVG+EIEI G+ + T ++
Sbjct: 221 ISGRGT--------VVTGRVESGIIKVGEEIEI-VGLKNTQ---------KTTCTGVEMF 262
Query: 280 GQFVEEAYPGGLVGV---GTKLDPYLTKGDLMAGNVVGKPGKLPPVWDSLRLEVHLLERV 336
+ ++E G VG+ GTK + ++ G V+ KPG + P D EV++L +
Sbjct: 263 RKLLDEGQSGDNVGILLRGTK------REEVERGQVLAKPGSIKP-HDKFEAEVYVLSKE 315
Query: 337 VG 338
G
Sbjct: 316 EG 317
>pir||S62701 translation elongation factor Tu precursor - Arabidopsis thaliana
>gi|1149571|emb|CAA61511.1| (X89227) mitochondrial
elongation factor Tu [Arabidopsis thaliana]
Length = 471
Score = 127 bits (315), Expect = 3e-28
Identities = 123/438 (28%), Positives = 194/438 (44%), Gaps = 92/438 (21%)
Query: 12 VNIGMVGHVDHGKTTLTKALTGVWT-------------DTHSEELRRGITIKIGFADAEI 58
VN+G +GHVDHGKTTLT A+T V D EE +RGITI + E
Sbjct: 85 VNVGTIGHVDHGKTTLTAAITKVLAEEGKAKAIAFDEIDKAPEEKKRGITIATAHVEYET 144
Query: 59 RRCPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMDGAILVIAAN 118
+ R + +D PGH + M+ GA+ MDG ILV++
Sbjct: 145 AK-----------------------RHYAHVDCPGHADYVKNMITGAAQMDGGILVVSGP 181
Query: 119 EPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALE----NYRQIKEFIEGTVAEN 174
+ P PQT+EH++ + +G +++ NK+++VD + LE R++ F + ++
Sbjct: 182 DG-PMPQTKEHILLARQVGVPSLVCFLNKVDVVDDPELLELVEMELRELLSFYK-FPGDD 239
Query: 175 APII---PISALHGANIDV-------LVKAIEDFIPTPKRDPNKPPKMLVLRSFDVNKPG 224
PII +SAL G N ++ L+ A++++IP P R +KP M + F + G
Sbjct: 240 IPIIRGSALSALQGTNDEIGRQAILKLMDAVDEYIPDPVRVLDKPFLMPIEDVFSIQGRG 299
Query: 225 TPPEKLVGGVLGGSIVQGKLKVGDEIEIRPGVPYEEHGRIKYEPITTEIVSLQAGGQFVE 284
T V G I QG +KVG+E+EI + E G +T ++ + ++
Sbjct: 300 T--------VATGRIEQGVIKVGEEVEI---LGLREGGCSTKSTVT----GVEMFKKILD 344
Query: 285 EAYPGGLVGVGTKLDPYLTKGDLMAGNVVGKPGKLPPVWDSLRLEVHLLERVVGTEQE-- 342
G VG+ L L + D+ G V+ KPG + E+++L + G
Sbjct: 345 NGQAGDNVGL---LLRGLKREDIQRGMVIAKPGSC-KTYKKFEAEIYVLTKDEGGRHTAF 400
Query: 343 ---------LKVEPIKRKEVLLLNVGTARTMGLVTGLGKDEIEVKLQIPVCAEPGDRVAI 393
L+ I K L NV VT + +L +PV E G R A+
Sbjct: 401 FSNYRPQFYLRTADITGKVELPENVKMVMPGDNVTAV------FELIMPVPLETGQRFAL 454
Query: 394 SRQIGSRWRLIGYGIIKE 411
R+ G R +G G++ +
Sbjct: 455 -REGG---RTVGAGVVSK 468
>sp|P23568|EFTU_MYCPN ELONGATION FACTOR TU (EF-TU) >gi|2146121|pir||S73503 translation
elongation factor EF-Tu - Mycoplasma pneumoniae
>gi|1673840|gb|AAB95825.1| (AE000019) elongation factor
TU [Mycoplasma pneumoniae]
Length = 394
Score = 127 bits (315), Expect = 3e-28
Identities = 119/439 (27%), Positives = 197/439 (44%), Gaps = 81/439 (18%)
Query: 3 EKRKSRQAEVNIGMVGHVDHGKTTLTKALTGVWT-------------DTHSEELRRGITI 49
EK + VN+G +GH+DHGKTTLT A+ V D EE RGITI
Sbjct: 4 EKFDRSKPHVNVGTIGHIDHGKTTLTAAICTVLAKEGKSAATRYDQIDKAPEEKARGITI 63
Query: 50 KIGFADAEIRRCPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMD 109
+ YS+ R + +D PGH + M+ GA+ MD
Sbjct: 64 NSAHVE-----------YSSDK------------RHYAHVDCPGHADYIKNMITGAAQMD 100
Query: 110 GAILVIAANEPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALENY-RQIKEFIE 168
GAILV++A + PQTREH++ + +G +++ NK ++ E+ E ++++ +
Sbjct: 101 GAILVVSATDSV-MPQTREHILLARQVGVPRMVVFLNKCDIATDEEVQELVAEEVRDLLT 159
Query: 169 --GTVAENAPIIPISALHG--------ANIDVLVKAIEDFIPTPKRDPNKPPKMLVLRSF 218
G +N PII SAL A I L+ A++++IPTP+R+ +KP + + +
Sbjct: 160 SYGFDGKNTPIIYGSALKALEGDPKWEAKIHDLMNAVDEWIPTPEREVDKPFLLAIEDTM 219
Query: 219 DVNKPGTPPEKLVGGVLGGSIVQGKLKVGDEIEIRPGVPYEEHGRIKYEPITTEIVS-LQ 277
+ GT V+ G + +G+LKVG EIEI + PI +V+ ++
Sbjct: 220 TITGRGT--------VVTGRVERGELKVGQEIEI-----------VGLRPIRKAVVTGIE 260
Query: 278 AGGQFVEEAYPGGLVGVGTKLDPYLTKGDLMAGNVVGKPGKLPPVWDSLRLEVHLLE--- 334
+ ++ A G GV L + + ++ G V+ KPG + P + E++ L+
Sbjct: 261 MFKKELDSAMAGDNAGV---LLRGVDRKEVERGQVLAKPGSIKP-HKKFKAEIYALKKEE 316
Query: 335 --RVVGTEQELKVEPIKRKEVLLLNVGTARTMGLVTGLGKDEIEVKLQIPVCAEPGDRVA 392
R G + + R + ++ +V I V+L P+ E G + +
Sbjct: 317 GGRHTGFLNGYRPQFYFRTTDVTGSISLPENTEMVLPGDNTSITVELIAPIACEKGSKFS 376
Query: 393 ISRQIGSRWRLIGYGIIKE 411
I R+ G R +G G + E
Sbjct: 377 I-REGG---RTVGAGSVTE 391
>gi|11465449 unknown; elongation factor Tu [Cyanidium caldarium]
>gi|6466352|gb|AAF12934.1|AF022186_56 (AF022186)
unknown; elongation factor Tu [Cyanidium caldarium]
Length = 410
Score = 127 bits (315), Expect = 3e-28
Identities = 127/454 (27%), Positives = 197/454 (42%), Gaps = 97/454 (21%)
Query: 4 KRKSRQAEVNIGMVGHVDHGKTTLTKALTGVWT--------------DTHSEELRRGITI 49
K + + +NIG +GHVDHGKTTLT A++ V D EE RGITI
Sbjct: 5 KFERSKPHINIGTIGHVDHGKTTLTAAISAVLASIDNTVKLKKFDEIDAAPEEKARGITI 64
Query: 50 KIGFADAEIRRCPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMD 109
+ Y T +R + +D PGH + M+ GA+ MD
Sbjct: 65 NTSHVE-----------YQTP------------LRHYAHVDCPGHADYVKNMITGAAQMD 101
Query: 110 GAILVIAANEPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALENYR-QIKEFIE 168
GAILV++A + P PQTREH++ + +G +I++ NK +++D E+ LE +++E +
Sbjct: 102 GAILVVSAADG-PMPQTREHILLAKQVGVPSIVVFLNKADMIDDEELLELVELEVRELLS 160
Query: 169 --GTVAENAPIIPISALHGA------------------NIDVLVKAIEDFIPTPKRDPNK 208
E P + SAL I L+ ++ + PTP+RD +K
Sbjct: 161 KYDFPGEEVPFVAGSALLALEACLKNPTIGKGKDKWVDKIFELMDMVDKYFPTPERDIDK 220
Query: 209 PPKMLVLRSFDVNKPGTPPEKLVGGVLGGSIVQGKLKVGDEIEIRPGVPYEEHGRIKYEP 268
M V F + GT V G I +G +KVG+ +EI G+
Sbjct: 221 TFLMAVEDVFSITGRGT--------VATGRIERGAIKVGETVEI-VGLK---------ST 262
Query: 269 ITTEIVSLQAGGQFVEEAYPGGLVGVGTKLDPYLTKGDLMAGNVVGKPGKLPPVWDSLRL 328
+T + L+ + ++E G VGV L + K D+ G V+ KPG + P D
Sbjct: 263 ASTTVTGLEMFQKTLDEGLAGDNVGV---LLRGVQKQDIERGMVLAKPGSITP-HDKFEA 318
Query: 329 EVHLLERVVGTEQELKVEPIKRKEVLLLNVGTARTMGLVTG---------LGKDEIEVKL 379
EV++L + G + P R + + + T L D I++ +
Sbjct: 319 EVYVLNKEEG-GRHTPFFPGYRPQFYVRTTDVTGNISQFTTDDGGSAEMVLPGDRIKMTV 377
Query: 380 QI--PVCAEPGDRVAISRQIGSRWRLIGYGIIKE 411
++ PV E G R AI R+ G R +G GI+ +
Sbjct: 378 ELIHPVAIEQGMRFAI-REGG---RTVGAGIVSK 407
>pir||A82532 translation elongation factor EF-Tu XF2640 XF2628 [imported] -
Xylella fastidiosa (strain 9a5c)
>gi|9107855|gb|AAF85425.1|AE004069_6 (AE004069)
elongation factor Tu [Xylella fastidiosa]
>gi|9107871|gb|AAF85437.1|AE004071_5 (AE004071)
elongation factor Tu [Xylella fastidiosa]
Length = 396
Score = 127 bits (315), Expect = 3e-28
Identities = 110/366 (30%), Positives = 171/366 (46%), Gaps = 80/366 (21%)
Query: 3 EKRKSRQAEVNIGMVGHVDHGKTTLTKALTGVWT-------------DTHSEELRRGITI 49
+K K + VN+G +GHVDHGKTTLT ALT V D EE RGITI
Sbjct: 4 DKFKRTKLHVNVGTIGHVDHGKTTLTAALTKVGAERFGGEFKAYDAIDAAPEEKARGITI 63
Query: 50 KIGFADAEIRRCPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMD 109
+ +ETE VR + +D PGH + M+ GA+ MD
Sbjct: 64 STAHVE----------------------YETE-VRHYAHVDCPGHADYVKNMITGAAQMD 100
Query: 110 GAILVIAANEPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALENYR-QIKEFIE 168
GAILV +A + P PQTREH++ + +G I++ NK ++VD + LE +++E +
Sbjct: 101 GAILVCSAADG-PMPQTREHILLARQVGVPYIVVFLNKADMVDDAELLELVEMEVRELLS 159
Query: 169 --GTVAENAPII---PISALHGANIDV-------LVKAIEDFIPTPKRDPNKPPKMLVLR 216
++ PI+ + AL G ++ L +A++ IP P+R ++P M V
Sbjct: 160 KYDFPGDDTPIVRGSALKALEGDQSEIGVPAIIRLAEALDTHIPNPERAIDRPFLMPVED 219
Query: 217 SFDVNKPGTPPEKLVGGVLGGSIVQGKLKVGDEIEIRPGVPYEEHGRIKYEPITTEIVS- 275
F ++ GT V+ G + G +KVGDE+EI + P + IV+
Sbjct: 220 VFSISGRGT--------VVTGRVECGVIKVGDEVEI-----------VGIRPTSKTIVTG 260
Query: 276 LQAGGQFVEEAYPG---GLVGVGTKLDPYLTKGDLMAGNVVGKPGKLPPVWDSLRLEVHL 332
++ + +++ G GL+ GTK D ++ G V+ KPG + EV++
Sbjct: 261 VEMFRKLLDQGQAGDNAGLLLRGTKRD------EVERGQVLAKPGSI-KAHKEFEAEVYV 313
Query: 333 LERVVG 338
L + G
Sbjct: 314 LSKEEG 319
>sp|P02990|EFTU_ECOLI ELONGATION FACTOR TU (EF-TU) (P-43) >gi|72864|pir||EFECT
translation elongation factor EF-Tu.B [validated] -
Escherichia coli >gi|6573314|pdb|1DG1|G Chain G, Whole,
Unmodified, Ef-Tu(Elongation Factor Tu).
>gi|6573315|pdb|1DG1|H Chain H, Whole, Unmodified,
Ef-Tu(Elongation Factor Tu). >gi|147969|gb|AAA24669.1|
(J01717) elongation factor Tu [Escherichia coli]
>gi|297394|emb|CAA40370.1| (X57091) translation
elongation factor EF-Tu [Escherichia coli]
>gi|396319|gb|AAC43078.1| (U00006) elongation factor
EF-Tu (duplicate gene) [Escherichia coli]
>gi|1790412|gb|AAC76954.1| (AE000472) protein chain
elongation factor EF-Tu (duplicate of tufA) [Escherichia
coli K12]
Length = 394
Score = 126 bits (314), Expect = 4e-28
Identities = 108/360 (30%), Positives = 168/360 (46%), Gaps = 70/360 (19%)
Query: 3 EKRKSRQAEVNIGMVGHVDHGKTTLTKALTGVWTDTHS-------------EELRRGITI 49
EK + + VN+G +GHVDHGKTTLT A+T V T+ EE RGITI
Sbjct: 4 EKFERTKPHVNVGTIGHVDHGKTTLTAAITTVLAKTYGGAARAFDQIDNAPEEKARGITI 63
Query: 50 KIGFADAEIRRCPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMD 109
+ Y T R + +D PGH + M+ GA+ MD
Sbjct: 64 NTSHVE-----------YDTP------------TRHYAHVDCPGHADYVKNMITGAAQMD 100
Query: 110 GAILVIAANEPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALENYR-QIKEFIE 168
GAILV+AA + P PQTREH++ + +G II+ NK ++VD E+ LE +++E +
Sbjct: 101 GAILVVAATDG-PMPQTREHILLGRQVGVPYIIVFLNKCDMVDDEELLELVEMEVRELLS 159
Query: 169 --GTVAENAPIIPISALHG--------ANIDVLVKAIEDFIPTPKRDPNKPPKMLVLRSF 218
++ PI+ SAL A I L ++ +IP P+R +KP + + F
Sbjct: 160 QYDFPGDDTPIVRGSALKALEGDAEWEAKILELAGFLDSYIPEPERAIDKPFLLPIEDVF 219
Query: 219 DVNKPGTPPEKLVGGVLGGSIVQGKLKVGDEIEIRPGVPYEEHGRIKYEPITTEIVSLQA 278
++ GT V+ G + +G +KVG+E+EI G+ E + ++
Sbjct: 220 SISGRGT--------VVTGRVERGIIKVGEEVEI-VGIK---------ETQKSTCTGVEM 261
Query: 279 GGQFVEEAYPGGLVGVGTKLDPYLTKGDLMAGNVVGKPGKLPPVWDSLRLEVHLLERVVG 338
+ ++E G VGV L + + ++ G V+ KPG + P EV++L + G
Sbjct: 262 FRKLLDEGRAGENVGV---LLRGIKREEIERGQVLAKPGTIKP-HTKFESEVYILSKDEG 317
>pir||EFECTA translation elongation factor EF-Tu.A [validated] - Escherichia
coli >gi|147897|gb|AAA50993.1| (J01691) elongation
factor Tu [Escherichia coli] >gi|606273|gb|AAA58136.1|
(U18997) CG Site No. 61 [Escherichia coli]
>gi|1789737|gb|AAC76364.1| (AE000410) protein chain
elongation factor EF-Tu (duplicate of tufB) [Escherichia
coli K12]
Length = 394
Score = 126 bits (314), Expect = 4e-28
Identities = 108/360 (30%), Positives = 168/360 (46%), Gaps = 70/360 (19%)
Query: 3 EKRKSRQAEVNIGMVGHVDHGKTTLTKALTGVWTDTHS-------------EELRRGITI 49
EK + + VN+G +GHVDHGKTTLT A+T V T+ EE RGITI
Sbjct: 4 EKFERTKPHVNVGTIGHVDHGKTTLTAAITTVLAKTYGGAARAFDQIDNAPEEKARGITI 63
Query: 50 KIGFADAEIRRCPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMD 109
+ Y T R + +D PGH + M+ GA+ MD
Sbjct: 64 NTSHVE-----------YDTP------------TRHYAHVDCPGHADYVKNMITGAAQMD 100
Query: 110 GAILVIAANEPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALENYR-QIKEFIE 168
GAILV+AA + P PQTREH++ + +G II+ NK ++VD E+ LE +++E +
Sbjct: 101 GAILVVAATDG-PMPQTREHILLGRQVGVPYIIVFLNKCDMVDDEELLELVEMEVRELLS 159
Query: 169 --GTVAENAPIIPISALHG--------ANIDVLVKAIEDFIPTPKRDPNKPPKMLVLRSF 218
++ PI+ SAL A I L ++ +IP P+R +KP + + F
Sbjct: 160 QYDFPGDDTPIVRGSALKALEGDAEWEAKILELAGFLDSYIPEPERAIDKPFLLPIEDVF 219
Query: 219 DVNKPGTPPEKLVGGVLGGSIVQGKLKVGDEIEIRPGVPYEEHGRIKYEPITTEIVSLQA 278
++ GT V+ G + +G +KVG+E+EI G+ E + ++
Sbjct: 220 SISGRGT--------VVTGRVERGIIKVGEEVEI-VGIK---------ETQKSTCTGVEM 261
Query: 279 GGQFVEEAYPGGLVGVGTKLDPYLTKGDLMAGNVVGKPGKLPPVWDSLRLEVHLLERVVG 338
+ ++E G VGV L + + ++ G V+ KPG + P EV++L + G
Sbjct: 262 FRKLLDEGRAGENVGV---LLRGIKREEIERGQVLAKPGTIKP-HTKFESEVYILSKDEG 317
>sp|P42482|EFTU_WOLSU ELONGATION FACTOR TU (EF-TU) >gi|587590|emb|CAA54199.1| (X76872)
elongation factor Tu [Wolinella succinogenes]
Length = 400
Score = 126 bits (314), Expect = 4e-28
Identities = 129/436 (29%), Positives = 201/436 (45%), Gaps = 91/436 (20%)
Query: 12 VNIGMVGHVDHGKTTLTKALTGVWT-------------DTHSEELRRGITIKIGFADAEI 58
VNIG +GHVDHGKTTL+ A++ V D EE RGITI
Sbjct: 13 VNIGTIGHVDHGKTTLSAAISAVLATKGLCELKDYDAIDNAPEERERGITI--------- 63
Query: 59 RRCPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMDGAILVIAAN 118
+TS + +ETE R + +D PGH + M+ GA+ MDGAILV++A
Sbjct: 64 ---------ATS----HIEYETE-NRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAA 109
Query: 119 EPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALENYR-QIKEFIEG--TVAENA 175
+ P PQTREH++ + +G I++ NK ++VD + LE +++E + ++
Sbjct: 110 DG-PMPQTREHILLSRQVGVPYIVVFLNKEDMVDDAELLELVEMEVRELLSNYDFPGDDT 168
Query: 176 PIIPISALH--------------GANIDVLVKAIEDFIPTPKRDPNKPPKMLVLRSFDVN 221
PI+ SAL G + L+ ++ +IPTP+RD +KP M V F +
Sbjct: 169 PIVAGSALKALEEANDQENVGEWGEKVLKLMAEVDRYIPTPERDVDKPFLMPVEDVFSIA 228
Query: 222 KPGTPPEKLVGGVLGGSIVQGKLKVGDEIEIRPGVPYEEHGRIKYEPITTEIVSLQAGGQ 281
GT V+ G I +G +KVGDE+EI G+ + T + ++ +
Sbjct: 229 GRGT--------VVTGRIERGVVKVGDEVEI-VGIRNTQ---------KTTVTGVEMFRK 270
Query: 282 FVEEAYPGGLVGV---GTKLDPYLTKGDLMAGNVVGKPGKLPPVWDSLRLEVHLLERVVG 338
+++ G VGV GTK K D+ G V+ K G + P + EV++L + G
Sbjct: 271 ELDKGEAGDNVGVLLRGTK------KEDVERGMVLCKIGSITP-HTNFEGEVYVLSKEEG 323
Query: 339 TEQE-----LKVEPIKRKEVLLLNVGTARTMGLVTGLGKDEIEVKLQIPVCAEPGDRVAI 393
+ + R + ++ + +V +I V+L PV E G R AI
Sbjct: 324 GRHTPFFNGYRPQFYVRTTDVTGSISLPEGVEMVMPGDNVKINVELIAPVALEEGTRFAI 383
Query: 394 SRQIGSRWRLIGYGII 409
R+ G R +G G++
Sbjct: 384 -REGG---RTVGAGVV 395
>sp|P46280|EFT2_SOYBN ELONGATION FACTOR TU, CHLOROPLAST PRECURSOR (EF-TU)
>gi|2119915|pir||S60659 translation elongation factor
EF-Tu precursor, chloroplast - soybean
>gi|949873|emb|CAA61444.1| (X89058) EF-Tu protein
[Glycine max]
Length = 479
Score = 126 bits (314), Expect = 4e-28
Identities = 124/452 (27%), Positives = 204/452 (44%), Gaps = 96/452 (21%)
Query: 4 KRKSRQAEVNIGMVGHVDHGKTTLTKALTGVWT-------------DTHSEELRRGITIK 50
K + ++ VNIG +GHVDHGKTTLT ALT D EE RGITI
Sbjct: 75 KFERKKPHVNIGTIGHVDHGKTTLTAALTMALASLGNSAPKKYDEIDAAPEERARGITIN 134
Query: 51 IGFADAEIRRCPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMDG 110
+ +ETE R + +D PGH + M+ GA+ MDG
Sbjct: 135 TATVE----------------------YETE-NRHYAHVDCPGHADYVKNMITGAAQMDG 171
Query: 111 AILVIAANEPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALENYR-QIKEFIE- 168
AILV++ + P PQT+EH++ + +G NI++ NK + VD E+ L+ +++E +
Sbjct: 172 AILVVSGADG-PMPQTKEHILLAKQVGVPNIVVFLNKQDQVDDEELLQLVELEVRELLSK 230
Query: 169 -GTVAENAPIIPISAL-------------HGAN-----IDVLVKAIEDFIPTPKRDPNKP 209
++ PII SAL G N I L++A++D+IP P+R P
Sbjct: 231 YEFPGDDVPIISGSALLSLEALMANPSIKRGENQWVDKIYELMEAVDDYIPIPQRQTELP 290
Query: 210 PKMLVLRSFDVNKPGTPPEKLVGGVLGGSIVQGKLKVGDEIEIRPGVPYEEHGRIKYEPI 269
+ + F + GT V G + +G ++VG+ ++I GV +
Sbjct: 291 FLLAIEDVFTITGRGT--------VATGRVERGTIRVGETVDI-VGVK---------DTR 332
Query: 270 TTEIVSLQAGGQFVEEAYPGGLVGVGTKLDPYLTKGDLMAGNVVGKPGKLPPVWDSLRLE 329
T + ++ + ++EA G VG+ L + K D+ G V+ KPG + P
Sbjct: 333 NTTVTGVEMFQKILDEALAGDNVGL---LLRGIQKTDIQRGMVLAKPGTITP-HTKFSAI 388
Query: 330 VHLLERVVGTEQE-----------LKVEPIKRKEVLLLNVGTARTMGLVTGLGKDEIEVK 378
V++L++ G ++ + K ++N + ++ G + ++ V+
Sbjct: 389 VYVLKKEEGGRHSPFFSGYRPQFYMRTTDVTGKVTEIMNDKDEESKMVMPG-DRVKLVVE 447
Query: 379 LQIPVCAEPGDRVAISRQIGSRWRLIGYGIIK 410
L +PV E G R AI R+ G + +G G+I+
Sbjct: 448 LIVPVACEQGMRFAI-REGG---KTVGAGVIQ 475
>pdb|1EFC|A Chain A, Intact Elongation Factor From E.Coli
>gi|4699822|pdb|1EFC|B Chain B, Intact Elongation Factor
From E.Coli
Length = 393
Score = 126 bits (314), Expect = 4e-28
Identities = 108/360 (30%), Positives = 168/360 (46%), Gaps = 70/360 (19%)
Query: 3 EKRKSRQAEVNIGMVGHVDHGKTTLTKALTGVWTDTHS-------------EELRRGITI 49
EK + + VN+G +GHVDHGKTTLT A+T V T+ EE RGITI
Sbjct: 3 EKFERTKPHVNVGTIGHVDHGKTTLTAAITTVLAKTYGGAARAFDQIDNAPEEKARGITI 62
Query: 50 KIGFADAEIRRCPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMD 109
+ Y T R + +D PGH + M+ GA+ MD
Sbjct: 63 NTSHVE-----------YDTP------------TRHYAHVDCPGHADYVKNMITGAAQMD 99
Query: 110 GAILVIAANEPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALENYR-QIKEFIE 168
GAILV+AA + P PQTREH++ + +G II+ NK ++VD E+ LE +++E +
Sbjct: 100 GAILVVAATDG-PMPQTREHILLGRQVGVPYIIVFLNKCDMVDDEELLELVEMEVRELLS 158
Query: 169 --GTVAENAPIIPISALHG--------ANIDVLVKAIEDFIPTPKRDPNKPPKMLVLRSF 218
++ PI+ SAL A I L ++ +IP P+R +KP + + F
Sbjct: 159 QYDFPGDDTPIVRGSALKALEGDAEWEAKILELAGFLDSYIPEPERAIDKPFLLPIEDVF 218
Query: 219 DVNKPGTPPEKLVGGVLGGSIVQGKLKVGDEIEIRPGVPYEEHGRIKYEPITTEIVSLQA 278
++ GT V+ G + +G +KVG+E+EI G+ E + ++
Sbjct: 219 SISGRGT--------VVTGRVERGIIKVGEEVEI-VGIK---------ETQKSTCTGVEM 260
Query: 279 GGQFVEEAYPGGLVGVGTKLDPYLTKGDLMAGNVVGKPGKLPPVWDSLRLEVHLLERVVG 338
+ ++E G VGV L + + ++ G V+ KPG + P EV++L + G
Sbjct: 261 FRKLLDEGRAGENVGV---LLRGIKREEIERGQVLAKPGTIKP-HTKFESEVYILSKDEG 316
>pir||C75110 translation elongation factor ef-1, chain alpha (tuf) PAB0465 -
Pyrococcus abyssi (strain Orsay)
>gi|5458107|emb|CAB49596.1| (AJ248285) translation
elongation factor EF-1, subunit alpha (tuf) [Pyrococcus
abyssi]
Length = 428
Score = 126 bits (314), Expect = 4e-28
Identities = 110/394 (27%), Positives = 173/394 (42%), Gaps = 102/394 (25%)
Query: 12 VNIGMVGHVDHGKTTLT-------------------------KALTGVWT-DTHSEELRR 45
VNI +GHVDHGK+T K+ W D EE R
Sbjct: 8 VNIVFIGHVDHGKSTTIGRLLYDTGNIPETIIKKFEEMGEKGKSFKFAWVMDRLKEERER 67
Query: 46 GITIKIGFADAEIRRCPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGA 105
GITI + E R ++ IDAPGH + M+ GA
Sbjct: 68 GITIDVAHTKFETPH-----------------------RYITIIDAPGHRDFVKNMITGA 104
Query: 106 SLMDGAILVIAANEPCPRPQTREHLMALQIIGQKNIIIAQNKIELVD-KEKALENYR-QI 163
S D A+LV+AA + PQT+EH + +G K+II+ NK+++V+ +K E + Q+
Sbjct: 105 SQADAAVLVVAATDGV-MPQTKEHAFLARTLGIKHIIVTINKMDMVNYDQKVFEKVKAQV 163
Query: 164 KEFIEGTVAENAPIIPISALHGANI------------DVLVKAIEDFIPTPKRDPNKPPK 211
++ + ++ P+IP SA +G NI L++A+ D IP P++ +KP +
Sbjct: 164 EKLLRTLGYKDFPVIPTSAWNGDNIVKKSDKMPWYNGPTLIEAL-DQIPEPEKPVDKPLR 222
Query: 212 MLVLRSFDVNKPGTPPEKLVGGVLGGSIVQGKLKVGDEIEIRPGVPYEEHGRIKYEPITT 271
+ + + + GT P G + GKLKVGD + P I ++PI
Sbjct: 223 IPIQDVYSIKGVGTVPV--------GRVETGKLKVGDVVIFEPA------STIFHKPIQG 268
Query: 272 EIVSLQAGGQFVEEAYPGGLVGVGTKLDPYLTKGDLMAGNVVGKPGKLPPVWDSLRLEVH 331
E+ S++ + ++EA PG +G + ++K D+ G+V G P K P
Sbjct: 269 EVKSIEMHHEPLQEALPGDNIGFNVR---GVSKNDIKRGDVAGHPDKPP----------- 314
Query: 332 LLERVVGTEQELKVEPIKRKEVLLLNVGTARTMG 365
VV T+ K ++++LN TA T+G
Sbjct: 315 ---TVVRTKDTFKA------QIIVLNHPTAITVG 339
>pdb|1D8T|A Chain A, Crystal Structure Of Elongation Factor, Tu (Ef-Tu-Mggdp)
Complexed With Ge2270a, A Thiazolyl Peptide Antibiotic
>gi|11514298|pdb|1D8T|B Chain B, Crystal Structure Of
Elongation Factor, Tu (Ef-Tu-Mggdp) Complexed With
Ge2270a, A Thiazolyl Peptide Antibiotic
Length = 393
Score = 126 bits (314), Expect = 4e-28
Identities = 108/360 (30%), Positives = 168/360 (46%), Gaps = 70/360 (19%)
Query: 3 EKRKSRQAEVNIGMVGHVDHGKTTLTKALTGVWTDTHS-------------EELRRGITI 49
EK + + VN+G +GHVDHGKTTLT A+T V T+ EE RGITI
Sbjct: 3 EKFERTKPHVNVGTIGHVDHGKTTLTAAITTVLAKTYGGAARAFDQIDNAPEEKARGITI 62
Query: 50 KIGFADAEIRRCPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMD 109
+ Y T R + +D PGH + M+ GA+ MD
Sbjct: 63 NTSHVE-----------YDTP------------TRHYAHVDCPGHADYVKNMITGAAQMD 99
Query: 110 GAILVIAANEPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALENYR-QIKEFIE 168
GAILV+AA + P PQTREH++ + +G II+ NK ++VD E+ LE +++E +
Sbjct: 100 GAILVVAATDG-PMPQTREHILLGRQVGVPYIIVFLNKCDMVDDEELLELVEMEVRELLS 158
Query: 169 --GTVAENAPIIPISALHG--------ANIDVLVKAIEDFIPTPKRDPNKPPKMLVLRSF 218
++ PI+ SAL A I L ++ +IP P+R +KP + + F
Sbjct: 159 QYDFPGDDTPIVRGSALKALEGDAEWEAKILELAGFLDSYIPEPERAIDKPFLLPIEDVF 218
Query: 219 DVNKPGTPPEKLVGGVLGGSIVQGKLKVGDEIEIRPGVPYEEHGRIKYEPITTEIVSLQA 278
++ GT V+ G + +G +KVG+E+EI G+ E + ++
Sbjct: 219 SISGRGT--------VVTGRVERGIIKVGEEVEI-VGIK---------ETQKSTCTGVEM 260
Query: 279 GGQFVEEAYPGGLVGVGTKLDPYLTKGDLMAGNVVGKPGKLPPVWDSLRLEVHLLERVVG 338
+ ++E G VGV L + + ++ G V+ KPG + P EV++L + G
Sbjct: 261 FRKLLDEGRAGENVGV---LLRGIKREEIERGQVLAKPGTIKP-HTKFESEVYILSKDEG 316
>pir||I53499 P43 - human >gi|7443384|pir||S68466 translation elongation factor
EF-Tu-like protein P43 precursor, mitochondrial - human
>gi|833999|gb|AAC60647.1| (S75463) P43=mitochondrial
elongation factor homolog [human, liver, Peptide, 452
aa] [Homo sapiens]
Length = 452
Score = 126 bits (313), Expect = 5e-28
Identities = 109/352 (30%), Positives = 163/352 (45%), Gaps = 73/352 (20%)
Query: 12 VNIGMVGHVDHGKTTLTKALTGVWT-------------DTHSEELRRGITIKIGFADAEI 58
VN+G +GHVDHGKTTLT A+T + D EE RGITI +
Sbjct: 61 VNVGTIGHVDHGKTTLTAAITKILAEGGGAKFKKYEEIDNAPEERARGITINAAHVE--- 117
Query: 59 RRCPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMDGAILVIAAN 118
YST+ R + D PGH + M+ G + +DG ILV+AAN
Sbjct: 118 --------YSTA------------ARHYAHTDCPGHADYVKNMITGTAPLDGCILVVAAN 157
Query: 119 EPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALENYRQIKEFIE--GTVAENAP 176
+ P PQTREHL+ + IG +++++ NK + V + +E +I+E + G E P
Sbjct: 158 DG-PMPQTREHLLLARQIGVEHVVVYVNKADAVQDSEMVE--LEIRELLTEFGYKGEETP 214
Query: 177 IIPISALHG----------ANIDVLVKAIEDFIPTPKRDPNKPPKMLVLRSFDVNKPGTP 226
+I SAL ++ L+ A++ +IP P RD KP + V + V PG
Sbjct: 215 VIVGSALCALEGRDPELGLKSVQKLLDAVDTYIPVPARDLEKPFLLPVEAVYSV--PGR- 271
Query: 227 PEKLVGGVLGGSIVQGKLKVGDEIEIRPGVPYEEHGRIKYEPITTEIVSLQAGGQFVEEA 286
G V+ G++ +G LK GDE E+ G K I T + ++ + +E A
Sbjct: 272 -----GTVVTGTLERGILKKGDECELL--------GHSK--NIRTVVTGIEMFHKSLERA 316
Query: 287 YPGGLVGVGTKLDPYLTKGDLMAGNVVGKPGKLPPVWDSLRLEVHLLERVVG 338
G +G L L + DL G V+ KPG + P + +V++L + G
Sbjct: 317 EAGDNLGA---LVRGLKREDLRRGLVMVKPGSIKP-HQKVEAQVYILSKEEG 364
>gi|11465753 elongation factor Tu [Porphyra purpurea]
>gi|1706616|sp|P51287|EFTU_PORPU ELONGATION FACTOR TU
(EF-TU) >gi|2147349|pir||S73208 translation elongation
factor EF-Tu - red alga (Porphyra purpurea) chloroplast
>gi|1276753|gb|AAC08173.1| (U38804) elongation factor Tu
[Porphyra purpurea]
Length = 409
Score = 126 bits (313), Expect = 5e-28
Identities = 122/428 (28%), Positives = 189/428 (43%), Gaps = 88/428 (20%)
Query: 4 KRKSRQAEVNIGMVGHVDHGKTTLTKALTGVWT-------------DTHSEELRRGITIK 50
K + ++ VNIG +GHVDHGKTTLT A++ + D EE RGITI
Sbjct: 5 KFERKKPHVNIGTIGHVDHGKTTLTAAISATLSTLGSTAAKKFDEIDAAPEEKARGITIN 64
Query: 51 IGFADAEIRRCPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMDG 110
+ +ET+ R + +D PGH + M+ GA+ MDG
Sbjct: 65 TAHVE----------------------YETD-NRHYAHVDCPGHADYVKNMITGAAQMDG 101
Query: 111 AILVIAANEPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALE----NYRQIKE- 165
AILV++A + P PQTREH++ + +G +++ NK + VD E+ LE R++
Sbjct: 102 AILVVSAADG-PMPQTREHILLAKQVGVPTLVVFLNKEDQVDDEELLELVELEGRELLSQ 160
Query: 166 ---------FIEGT-------VAENAPIIPISALHGANIDVLVKAIEDFIPTPKRDPNKP 209
F+ G+ V +N I I L++A++ +IPTP+RD +K
Sbjct: 161 YDFPGDDIPFVAGSALLALEAVTKNTSIKKGEDKWVDKIFSLMEAVDTYIPTPERDVDKT 220
Query: 210 PKMLVLRSFDVNKPGTPPEKLVGGVLGGSIVQGKLKVGDEIEIRPGVPYEEHGRIKYEPI 269
M V F + GT V G I +G +KVGD IEI G+ E
Sbjct: 221 FLMAVEDVFSITGRGT--------VATGRIERGIIKVGDTIEI-VGL---------RETR 262
Query: 270 TTEIVSLQAGGQFVEEAYPGGLVGVGTKLDPYLTKGDLMAGNVVGKPGKLPPVWDSLRLE 329
TT I L+ + +EE G +G+ L + K D+ G V+ KPG + P E
Sbjct: 263 TTTITGLEMFQKTLEEGLAGDNIGI---LLRGVQKKDIERGMVLAKPGTITP-HTQFEAE 318
Query: 330 VHLLERVVGTEQELKVEPIKRKEVLLLNVGTARTMGLVTGLGKDEIEVKLQIPVCAEPGD 389
V++L + G + P R + + T+ T + E+ + PGD
Sbjct: 319 VYILTKEEG-GRHTPFFPGYRPQFYVRTTDVTGTINQFTADDGTDAEMVM-------PGD 370
Query: 390 RVAISRQI 397
R+ ++ ++
Sbjct: 371 RIKMTAEL 378
>emb|CAA54197.1| (X76870) elongation factor Tu [Stigmatella aurantiaca]
Length = 379
Score = 125 bits (312), Expect = 7e-28
Identities = 101/348 (29%), Positives = 164/348 (47%), Gaps = 72/348 (20%)
Query: 17 VGHVDHGKTTLTKALTGVWTDTHS-------------EELRRGITIKIGFADAEIRRCPN 63
+GHVDHGKT+LT A+T V T EE RGITI + + +
Sbjct: 1 IGHVDHGKTSLTAAITKVLAKTGGATFLAYDQIDKAPEERERGITISTAHVEYQTKN--- 57
Query: 64 CGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMDGAILVIAANEPCPR 123
R + +D PGH + M+ GA+ MDGAILV++A + P
Sbjct: 58 --------------------RHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADG-PM 96
Query: 124 PQTREHLMALQIIGQKNIIIAQNKIELVDKEKALENYR-QIKEFIE--GTVAENAPIIP- 179
PQTREH++ + +G I++ NK++++D + E ++++ ++ ++ PIIP
Sbjct: 97 PQTREHILLARQVGVPYIVVFLNKVDMLDDPELRELVEMEVRDLLKKYEFPGDSIPIIPG 156
Query: 180 --ISALHGANIDV-------LVKAIEDFIPTPKRDPNKPPKMLVLRSFDVNKPGTPPEKL 230
+ AL G D+ L+ A++++IPTP+R +KP M V F + GT
Sbjct: 157 SALKALEGDTSDIGEGAILKLMAAVDEYIPTPQRATDKPFLMPVEDVFSIAGRGT----- 211
Query: 231 VGGVLGGSIVQGKLKVGDEIEIRPGVPYEEHGRIKYEPITTEIVSLQAGGQFVEEAYPGG 290
V G + +GK+KVG+E+EI P ++ T I ++ + ++E G
Sbjct: 212 ---VATGRVERGKIKVGEEVEIVGIRPTQK----------TVITGVEMFRKLLDEGMAGD 258
Query: 291 LVGVGTKLDPYLTKGDLMAGNVVGKPGKLPPVWDSLRLEVHLLERVVG 338
+G L L DL G V+ KPG + P + +V++L + G
Sbjct: 259 NIGA---LLRGLKPEDLERGQVLAKPGSINP-HTKFKAQVYVLSKEEG 302
>sp|Q9ZK19|EFTU_HELPJ ELONGATION FACTOR TU (EF-TU) >gi|7443412|pir||E71844 translation
elongation factor EF-Tu (ef-tu) - Helicobacter pylori
(strain J99) >gi|4155731|gb|AAD06711.1| (AE001541)
ELONGATION FACTOR TU (EF-TU) [Helicobacter pylori J99]
Length = 399
Score = 125 bits (312), Expect = 7e-28
Identities = 125/444 (28%), Positives = 200/444 (44%), Gaps = 90/444 (20%)
Query: 3 EKRKSRQAEVNIGMVGHVDHGKTTLTKALTGVWT-------------DTHSEELRRGITI 49
EK VNIG +GHV HGKTTL+ A++ V + D +E RGITI
Sbjct: 4 EKFNRTNPHVNIGTIGHVYHGKTTLSAAISAVLSLKGLAEMKDYDNIDNAPQEKERGITI 63
Query: 50 KIGFADAEIRRCPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMD 109
+ +ETE R + +D PGH + M+ GA+ MD
Sbjct: 64 ATSHIE----------------------YETE-TRHYAHVDCPGHADYVKNMITGAAQMD 100
Query: 110 GAILVIAANEPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALENYR-QIKEFIE 168
GAILV++A + P PQTREH++ + +G +I++ NK ++VD ++ LE +++E +
Sbjct: 101 GAILVVSAADG-PMPQTREHILLSRQVGVPHIVVFLNKQDMVDDQELLELVEMEVRELLS 159
Query: 169 G--TVAENAPIIPISALH-------------GANIDVLVKAIEDFIPTPKRDPNKPPKML 213
++ PI+ SAL G + L+ ++ +IPTP+RD K M
Sbjct: 160 AYEFPGDDTPIVAGSALRALEEAKAGNVGEWGEKVLKLMAEVDSYIPTPERDTEKTFLMP 219
Query: 214 VLRSFDVNKPGTPPEKLVGGVLGGSIVQGKLKVGDEIEIRPGVPYEEHGRIKYEPITTEI 273
V F + GT V+ G I +G +KVGDE+EI G+ + T +
Sbjct: 220 VEDVFSIAGRGT--------VVTGRIERGVVKVGDEVEI-VGIRATQ---------KTTV 261
Query: 274 VSLQAGGQFVEEAYPGGLVGV---GTKLDPYLTKGDLMAGNVVGKPGKLPPVWDSLRLEV 330
++ + +E+ G VGV GTK K ++ G V+ KPG + P E+
Sbjct: 262 TGVEMFRKELEKGEAGDNVGVLLRGTK------KEEVERGMVLCKPGSITP-HKKFEEEI 314
Query: 331 HLLERVVGTEQ-----ELKVEPIKRKEVLLLNVGTARTMGLVTGLGKDEIEVKLQIPVCA 385
++L + G + + R + ++ + +V +I V+L PV
Sbjct: 315 YVLSKEEGGRHTPFFTNYRPQFYVRTTDVTGSITLPEGVEMVMPGDNVKITVELISPVAL 374
Query: 386 EPGDRVAISRQIGSRWRLIGYGII 409
E G + AI R+ G R +G G++
Sbjct: 375 ELGTKFAI-REGG---RTVGAGVV 394
>prf||1607332B elongation factor Tu [Chlamydomonas reinhardtii]
Length = 418
Score = 125 bits (312), Expect = 7e-28
Identities = 118/436 (27%), Positives = 196/436 (44%), Gaps = 95/436 (21%)
Query: 4 KRKSRQAEVNIGMVGHVDHGKTTLTKALTGVWT-------------DTHSEELRRGITIK 50
K + ++ VNIG +GHVDHGKTTLT A+T D+ EE RGITI
Sbjct: 5 KFERKKPHVNIGTIGHVDHGKTTLTAAITMTLAAAGGSVGKKYDEIDSAPEEKARGITIN 64
Query: 51 IGFADAEIRRCPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMDG 110
+ +ETE R + +D PGH + M+ GA+ MDG
Sbjct: 65 TATVE----------------------YETE-KRHYAHVDCPGHADYVKNMITGAAQMDG 101
Query: 111 AILVIAANEPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALENYR-QIKEFIE- 168
AILV++ + P PQT+EH++ + +G N+++ NK + VD ++ LE +++E ++
Sbjct: 102 AILVVSGADG-PMPQTKEHILLAKQVGVPNVVVFLNKEDQVDDKELLELVELEVRETLDK 160
Query: 169 -GTVAENAPIIPISAL-------------HGAN-----IDVLVKAIEDFIPTPKRDPNKP 209
+ P++P SAL G N I L+ ++ +IPTP+R+ +KP
Sbjct: 161 YEFPGDEIPVVPGSALLALETLIENPKTQRGENKWVDKIYQLMDNVDSYIPTPQRETDKP 220
Query: 210 PKMLVLRSFDVNKPGTPPEKLVGGVLGGSIVQGKLKVGDEIEIRPGVPYEEHGRIKYEPI 269
+ V + GT V G + +G L++ D +EI + P
Sbjct: 221 FLLAVEDVLSITGRGT--------VATGRVERGALRISDNVEI-----------VGLRPT 261
Query: 270 TTEIVS-LQAGGQFVEEAYPGGLVGVGTKLDPYLTKGDLMAGNVVGKPGKLPPVWDSLRL 328
T +V+ L+ + ++E G VGV L + K D+ G V+ KPG + P
Sbjct: 262 QTAVVTGLEMFKKTLDETLAGDNVGV---LLRGVQKADIERGMVIAKPGTITP-HTKFEA 317
Query: 329 EVHLLERVVGTEQELKVEPIKRKEVLLLNVGTARTMGLVTGLGKDEIEVKLQIPVCAE-- 386
+V++L++ G + + + V T G V G + I+++ V E
Sbjct: 318 QVYVLKKEEGGRHSAFMIGYQPQ----FYVRTTDVTGKVVGF--NHIQMRNPSSVAEEHS 371
Query: 387 -----PGDRVAISRQI 397
PGDR++++ ++
Sbjct: 372 NKMAMPGDRISMTVEL 387
>gi|4507733 Tu translation elongation factor, mitochondrial [Homo sapiens]
>gi|2136315|pir||S62767 translation elongation factor
EF-Tu precursor - human >gi|704416|gb|AAB00499.1|
(L38995) elongation factor Tu [Homo sapiens]
Length = 452
Score = 125 bits (312), Expect = 7e-28
Identities = 109/353 (30%), Positives = 163/353 (45%), Gaps = 72/353 (20%)
Query: 12 VNIGMVGHVDHGKTTLTKALTGVWT-------------DTHSEELRRGITIKIGFADAEI 58
VN+G +GHVDHGKTTLT A+T + D EE RGITI +
Sbjct: 58 VNVGTIGHVDHGKTTLTAAITKILAEGGGAKFKKYEEIDNAPEERARGITINAAHVE--- 114
Query: 59 RRCPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMDGAILVIAAN 118
YST+ R + D PGH + M+ G + +DG ILV+AAN
Sbjct: 115 --------YSTA------------ARHYAHTDCPGHADYVKNMITGTAPLDGCILVVAAN 154
Query: 119 EPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALENYR-QIKEFIE--GTVAENA 175
+ P PQTREHL+ + IG +++++ NK + V + +E +I+E + G E
Sbjct: 155 DG-PMPQTREHLLLARQIGVEHVVVYVNKADAVQDSEMVELVELEIRELLTEFGYKGEET 213
Query: 176 PIIPISALHG----------ANIDVLVKAIEDFIPTPKRDPNKPPKMLVLRSFDVNKPGT 225
P+I SAL ++ L+ A++ +IP P RD KP + V + V PG
Sbjct: 214 PVIVGSALCALEGRDPELGLKSVQKLLDAVDTYIPVPARDLEKPFLLPVEAVYSV--PGR 271
Query: 226 PPEKLVGGVLGGSIVQGKLKVGDEIEIRPGVPYEEHGRIKYEPITTEIVSLQAGGQFVEE 285
G V+ G++ +G LK GDE E+ G K I T + ++ + +E
Sbjct: 272 ------GTVVTGTLERGILKKGDECELL--------GHSK--NIRTVVTGIEMFHKSLER 315
Query: 286 AYPGGLVGVGTKLDPYLTKGDLMAGNVVGKPGKLPPVWDSLRLEVHLLERVVG 338
A G +G L L + DL G V+ KPG + P + +V++L + G
Sbjct: 316 AEAGDNLGA---LVRGLKREDLRRGLVMVKPGSIKP-HQKVEAQVYILSKEEG 364
>sp|P49411|EFTU_HUMAN ELONGATION FACTOR TU, MITOCHONDRIAL PRECURSOR (P43)
>gi|899285|emb|CAA59169.1| (X84694) mitochondrial
elongation factor Tu [Homo sapiens]
Length = 452
Score = 125 bits (312), Expect = 7e-28
Identities = 109/353 (30%), Positives = 163/353 (45%), Gaps = 72/353 (20%)
Query: 12 VNIGMVGHVDHGKTTLTKALTGVWT-------------DTHSEELRRGITIKIGFADAEI 58
VN+G +GHVDHGKTTLT A+T + D EE RGITI +
Sbjct: 58 VNVGTIGHVDHGKTTLTAAITKILAEGGGAKFKKYEEIDNAPEERARGITINAAHVE--- 114
Query: 59 RRCPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMDGAILVIAAN 118
YST+ R + D PGH + M+ G + +DG ILV+AAN
Sbjct: 115 --------YSTA------------ARHYAHTDCPGHADYVKNMITGTAPLDGCILVVAAN 154
Query: 119 EPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALENYR-QIKEFIE--GTVAENA 175
+ P PQTREHL+ + IG +++++ NK + V + +E +I+E + G E
Sbjct: 155 DG-PMPQTREHLLLARQIGVEHVVVYVNKADAVQDSEMVELVELEIRELLTEFGYKGEET 213
Query: 176 PIIPISALHG----------ANIDVLVKAIEDFIPTPKRDPNKPPKMLVLRSFDVNKPGT 225
P+I SAL ++ L+ A++ +IP P RD KP + V + V PG
Sbjct: 214 PVIVGSALCALEGRDPELGLKSVQKLLDAVDTYIPVPARDLEKPFLLPVEAVYSV--PGR 271
Query: 226 PPEKLVGGVLGGSIVQGKLKVGDEIEIRPGVPYEEHGRIKYEPITTEIVSLQAGGQFVEE 285
G V+ G++ +G LK GDE E+ G K I T + ++ + +E
Sbjct: 272 ------GTVVTGTLERGILKKGDECELL--------GHSK--NIRTVVTGIEMFHKSLER 315
Query: 286 AYPGGLVGVGTKLDPYLTKGDLMAGNVVGKPGKLPPVWDSLRLEVHLLERVVG 338
A G +G L L + DL G V+ KPG + P + +V++L + G
Sbjct: 316 AEAGDNLGA---LVRGLKREDLRRGLVMVKPGSIKP-HQKVEAQVYILSKEEG 364
>gi|11466416 translational elongation factor Tu [Mesostigma viride]
>gi|7259559|gb|AAF43860.1|AF166114_72 (AF166114)
translational elongation factor Tu [Mesostigma viride]
Length = 410
Score = 125 bits (311), Expect = 9e-28
Identities = 128/457 (28%), Positives = 198/457 (43%), Gaps = 101/457 (22%)
Query: 3 EKRKSRQAEVNIGMVGHVDHGKTTLTKALT---GVWT----------DTHSEELRRGITI 49
EK + ++ +NIG +GHVDHGKTTLT A+T V T D EE RGITI
Sbjct: 4 EKFERKKPHINIGTIGHVDHGKTTLTAAITMALAVGTGKSGKRYDEIDAAPEEKARGITI 63
Query: 50 KIGFADAEIRRCPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMD 109
+ +ETE R + +D PGH + M+ GA+ MD
Sbjct: 64 NTAHVE----------------------YETE-TRHYAHVDCPGHADYVKNMITGAAQMD 100
Query: 110 GAILVIAANEPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALENYR-QIKEFIE 168
GAILV++ + P PQT+EH++ + +G N+++ NK + VD + LE +++E +
Sbjct: 101 GAILVVSGADG-PMPQTKEHILLAKQVGVPNMVVFLNKEDQVDDPELLELVELEVRETLN 159
Query: 169 G--TVAENAPIIPISAL-------------HGAN-----IDVLVKAIEDFIPTPKRDPNK 208
+ P++ SAL G+N I L+ ++ +IPTP+RD +K
Sbjct: 160 SYDFPGDEIPVVAGSALMALEALTQDSKLARGSNPWVDKIYALMDQVDKYIPTPQRDTDK 219
Query: 209 PPKMLVLRSFDVNKPGTPPEKLVGGVLGGSIVQGKLKVGDEIEIRPGVPYEEHGRIKYEP 268
P M + F + GT V G + +GK+ VG+ ++I + P
Sbjct: 220 PFLMAIEDVFSITGRGT--------VATGRVERGKVVVGENVDI---------VGLANIP 262
Query: 269 ITTEIVSLQAGGQFVEEAYPGGLVGVGTKLDPYLTKGDLMAGNVVGKPGKLPPVWDSLRL 328
T + L+ + +EE+ G VGV L + K + G V+ KP + P +R
Sbjct: 263 QNTTVTGLEMFQKTLEESVAGDNVGV---LLRGIQKDQVERGMVLAKPNTIKP---HIRF 316
Query: 329 EVHLLERVVGTEQELKVEPIKRKEVLLLNVGTARTMGLVTGLGKDE-------------- 374
E + V+ E+ + P V T G + D+
Sbjct: 317 ESEVY--VLAKEEGGRHTPFFPGYRPQFYVRTTDVTGKIDSFKADDGSDTQMVMPGDRVK 374
Query: 375 IEVKLQIPVCAEPGDRVAISRQIGSRWRLIGYGIIKE 411
+ V L P+ E G R AI R+ G R +G GI+ E
Sbjct: 375 MVVSLIQPIAIEKGMRFAI-REGG---RTVGAGIVSE 407
>pir||D82332 translation elongation factor EF-Tu VC0362 [imported] - Vibrio
cholerae (group O1 strain N16961)
>gi|9654779|gb|AAF93535.1| (AE004124) elongation factor
TU [Vibrio cholerae]
Length = 394
Score = 125 bits (311), Expect = 9e-28
Identities = 110/363 (30%), Positives = 165/363 (45%), Gaps = 76/363 (20%)
Query: 3 EKRKSRQAEVNIGMVGHVDHGKTTLTKALTGVWT-------------DTHSEELRRGITI 49
EK + + VN+G +GHVDHGKTTLT A+ V D EE RGITI
Sbjct: 4 EKFERTKPHVNVGTIGHVDHGKTTLTAAICTVLAKVYGGKARDFASIDNAPEERERGITI 63
Query: 50 KIGFADAEIRRCPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMD 109
+ + PN R + +D PGH + M+ GA+ MD
Sbjct: 64 NTSHVEYD---TPN--------------------RHYAHVDCPGHADYVKNMITGAAQMD 100
Query: 110 GAILVIAANEPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALENYR-QIKEFIE 168
G ILV+AA + P PQTREH++ + +G II+ NK ++VD E+ LE +++E +
Sbjct: 101 GGILVVAATDG-PMPQTREHILLGRQVGIPYIIVFMNKCDMVDDEELLELVEMEVRELLS 159
Query: 169 --GTVAENAPIIPISALHGAN--------IDVLVKAIEDFIPTPKRDPNKPPKMLVLRSF 218
++ P+I SAL N I L +A++ +IP P+R + M + F
Sbjct: 160 EYDFPGDDLPVIQGSALGALNGEAQWEAKIVELAEALDTYIPEPERAVDMAFLMPIEDVF 219
Query: 219 DVNKPGTPPEKLVGGVLGGSIVQGKLKVGDEIEIRPGVPYEEHGRIKYEPITTEIVSLQA 278
+ GT V+ G I +G LKVGDE+ I G+ E + T ++
Sbjct: 220 SIQGRGT--------VVTGRIERGILKVGDEVAI-VGIK---------ETVKTTCTGVEM 261
Query: 279 GGQFVEEAYPGGLVGV---GTKLDPYLTKGDLMAGNVVGKPGKLPPVWDSLRLEVHLLER 335
+ ++E G VG GTK + ++ G V+ KPG + P EV++L +
Sbjct: 262 FRKLLDEGRAGENVGALLRGTK------REEVERGQVLAKPGSITP-HTKFESEVYVLSK 314
Query: 336 VVG 338
G
Sbjct: 315 DEG 317
>sp|P50373|EFTU_CYCME ELONGATION FACTOR TU (EF-TU) >gi|836836|gb|AAA87688.1| (U09430)
protein synthesis elongation factor Tu [Cyclotella
meneghiniana]
Length = 409
Score = 125 bits (310), Expect = 1e-27
Identities = 109/370 (29%), Positives = 166/370 (44%), Gaps = 80/370 (21%)
Query: 3 EKRKSRQAEVNIGMVGHVDHGKTTLTKALTGVWT-------------DTHSEELRRGITI 49
EK + +NIG +GHVDHGKTT T A+T D EE RGITI
Sbjct: 4 EKFARAKPHINIGTIGHVDHGKTTFTAAITATLANDGESFAKAYSDIDGAPEERARGITI 63
Query: 50 KIGFADAEIRRCPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMD 109
+ + R R + +D PGH + M+ GA+ MD
Sbjct: 64 NTAHVEYQTRD-----------------------RHYAHVDCPGHADYVKNMITGAAQMD 100
Query: 110 GAILVIAANEPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALENYR-QIKEFIE 168
GAILV++A + P PQTREH++ + +G +I++ NK + VD ++ LE +++E +
Sbjct: 101 GAILVVSAADG-PMPQTREHILLAKQVGVPHIVVFLNKQDQVDDDELLELVELEVRELLS 159
Query: 169 --GTVAENAPIIPISALHGA------------------NIDVLVKAIEDFIPTPKRDPNK 208
++ PI P S L I L+ A++ +IPTP+RD K
Sbjct: 160 TYDFPGDDIPICPGSRLQAIEAISSNPTLKRGDNPWVDKIYALMDAVDAYIPTPERDVEK 219
Query: 209 PPKMLVLRSFDVNKPGTPPEKLVGGVLGGSIVQGKLKVGDEIEIRPGVPYEEHGRIKYEP 268
M + F + GT V G I +G +KV D +EI G+ G K
Sbjct: 220 TFLMAIEDVFSITGRGT--------VATGRIERGVIKVVDNVEI-VGI-----GDTK--- 262
Query: 269 ITTEIVSLQAGGQFVEEAYPGGLVGVGTKLDPYLTKGDLMAGNVVGKPGKLPPVWDSLRL 328
TT I ++ + +EE + G VG+ L +T+ ++ G V+ KPG + P +
Sbjct: 263 -TTTITGIEMFQKTLEEGFAGDNVGI---LLRGVTRENIERGMVLAKPGTITP-HTNFES 317
Query: 329 EVHLLERVVG 338
EV++L + G
Sbjct: 318 EVYVLTKEEG 327
>sp|P17746|EFTU_CHLRE ELONGATION FACTOR TU (EF-TU) >gi|81261|pir||S09153 translation
elongation factor EF-Tu - Chlamydomonas reinhardtii
chloroplast >gi|14315|emb|CAA36499.1| (X52257)
elongation factor Tu (AA 1 to 418) [Chlamydomonas
reinhardtii]
Length = 418
Score = 124 bits (309), Expect = 2e-27
Identities = 118/436 (27%), Positives = 195/436 (44%), Gaps = 95/436 (21%)
Query: 4 KRKSRQAEVNIGMVGHVDHGKTTLTKALTGVWT-------------DTHSEELRRGITIK 50
K + ++ VNIG +GHVDHGKTTLT A+T D+ EE RGITI
Sbjct: 5 KFERKKPHVNIGTIGHVDHGKTTLTAAITMTLAAAGGSVGKKYDEIDSAPEEKARGITIN 64
Query: 51 IGFADAEIRRCPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMDG 110
+ +ETE R + +D PGH + M+ GA+ MDG
Sbjct: 65 TAHVE----------------------YETE-KRHYAHVDCPGHADYVKNMITGAAQMDG 101
Query: 111 AILVIAANEPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALENYR-QIKEFIE- 168
AILV++ + P PQT+EH++ + +G N+++ NK + VD ++ LE +++E ++
Sbjct: 102 AILVVSGADG-PMPQTKEHILLAKQVGVPNVVVFLNKEDQVDDKELLELVELEVRETLDK 160
Query: 169 -GTVAENAPIIPISAL-------------HGAN-----IDVLVKAIEDFIPTPKRDPNKP 209
+ P++P SAL G N I L+ ++ +IPTP+R+ +KP
Sbjct: 161 YEFPGDEIPVVPGSALLALEALIENPKTQRGENKWVDKIYQLMDNVDSYIPTPQRETDKP 220
Query: 210 PKMLVLRSFDVNKPGTPPEKLVGGVLGGSIVQGKLKVGDEIEIRPGVPYEEHGRIKYEPI 269
+ V + GT V G + +G L++ D +EI + P
Sbjct: 221 FLLAVEDVLSITGRGT--------VATGRVERGALRISDNVEI-----------VGLRPT 261
Query: 270 TTEIVS-LQAGGQFVEEAYPGGLVGVGTKLDPYLTKGDLMAGNVVGKPGKLPPVWDSLRL 328
T +V+ L+ + ++E G VGV L + K D+ G V+ KPG + P
Sbjct: 262 QTAVVTGLEMFKKTLDETLAGDNVGV---LLRGVQKKDIERGMVIAKPGTITP-HTKFEA 317
Query: 329 EVHLLERVVGTEQELKVEPIKRKEVLLLNVGTARTMGLVTGLGKDEIEVKLQIPVCAE-- 386
+V++L + G + + + V T G V G + I+++ V E
Sbjct: 318 QVYVLTKEEGGRHSAFMIGYQPQ----FYVRTTDVTGKVVGF--NHIQMRNPSSVAEEHS 371
Query: 387 -----PGDRVAISRQI 397
PGDR++++ ++
Sbjct: 372 NKMAMPGDRISMTVEL 387
>sp|P14634|EFTU_ASTLO ELONGATION FACTOR TU (EF-TU) >gi|72866|pir||EFITT translation
elongation factor EF-Tu - euglenid (Astasia longa)
plastid >gi|414923|emb|CAA53319.1| (X75652) elongation
factor Ef-Tu [Astasia longa] >gi|4468077|emb|CAB37997.1|
(X14385) elongation factor Tu [Astasia longa]
Length = 409
Score = 124 bits (308), Expect = 2e-27
Identities = 128/452 (28%), Positives = 200/452 (43%), Gaps = 96/452 (21%)
Query: 3 EKRKSRQAEVNIGMVGHVDHGKTTLTKALTGVWT-------------DTHSEELRRGITI 49
+K + + +NIG +GHVDHGKTTLT A+T + D+ EE RGITI
Sbjct: 4 QKFERIKPHINIGTIGHVDHGKTTLTAAITMALSVTGNTKSKKYEEIDSSPEEKARGITI 63
Query: 50 KIGFADAEIRRCPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMD 109
+ E + R + +D PGH + M+ GA+ MD
Sbjct: 64 NTAHVEYETKN-----------------------RHYAHVDCPGHADYIKNMITGAAQMD 100
Query: 110 GAILVIAANEPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALENYR-QIKEFIE 168
GAILVI+A + P PQT+EH++ + +G N+++ NK + +D + LE +I+E +
Sbjct: 101 GAILVISATDG-PMPQTKEHILLAKQVGVPNLVVFLNKEDQIDDNELLELIELEIRETLN 159
Query: 169 G--TVAENAPIIPISAL-------------HGAN-----IDVLVKAIEDFIPTPKRDPNK 208
+ PII SAL G N I L+ I+ +IPTP RD +K
Sbjct: 160 NYEFPGDEIPIITGSALLAIEALNKNPKIIKGENKWVDKILDLMDKIDSYIPTPIRDTDK 219
Query: 209 PPKMLVLRSFDVNKPGTPPEKLVGGVLGGSIVQGKLKVGDEIEIRPGVPYEEHGRIKYEP 268
+ + + GT V G I +GK+KVG+ +E+ I +
Sbjct: 220 DFLLAIEDVLSITGRGT--------VATGRIERGKIKVGETVEL-----------IGLKN 260
Query: 269 I-TTEIVSLQAGGQFVEEAYPGGLVGVGTKLDPYLTKGDLMAGNVVGKPGKLPPVWDSLR 327
I +T I L+ + ++EA G VGV L + K ++ G V+ KPG + P
Sbjct: 261 IKSTTITGLEMFQKSLDEAIAGDNVGV---LLRGIQKNEVERGMVIAKPGTIQP-HIKFN 316
Query: 328 LEVHLLERVVGTEQELKVEPIKRKEVLLLNVGTAR----------TMGLVTGLGKDEIEV 377
+V++L + G E K + + T + T+ +V K ++ V
Sbjct: 317 SQVYILTKEEGGRHTPFFEGYKPQFYVRTTDVTGKIESFKSDDGTTVQMVMPGDKIKMIV 376
Query: 378 KLQIPVCAEPGDRVAISRQIGSRWRLIGYGII 409
+L P+ E G R AI R+ G + +G G+I
Sbjct: 377 ELVQPIAIEKGMRFAI-REGG---KTVGAGVI 404
>gi|11467744 elongation factor EF-Tu [Guillardia theta]
>gi|119199|sp|P19457|EFTU_GUITH ELONGATION FACTOR TU
(EF-TU) >gi|3603069|gb|AAC35730.1| (AF041468) elongation
factor EF-Tu [Guillardia theta]
Length = 408
Score = 124 bits (308), Expect = 2e-27
Identities = 108/352 (30%), Positives = 159/352 (44%), Gaps = 78/352 (22%)
Query: 3 EKRKSRQAEVNIGMVGHVDHGKTTLTKALTGVWT------------DTHSEELRRGITIK 50
+K + + VNIG +GHVDHGKTTLT A++ + D+ EE RGITI
Sbjct: 4 DKFERSKPHVNIGTIGHVDHGKTTLTAAISATLSQYTGKSKKFDEIDSAPEERARGITIN 63
Query: 51 IGFADAEIRRCPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMDG 110
+ E + Y H +D PGH + M+ GA+ MDG
Sbjct: 64 TAHVEYETDKW-------------YYAH----------VDCPGHADYVKNMITGAAQMDG 100
Query: 111 AILVIAANEPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALENYR-QIKEFIE- 168
AILV +A P PQTREH++ + +G I++ NK ++VD E+ LE + +++E +E
Sbjct: 101 AILVCSAANG-PMPQTREHILLAKQVGVPYIVVFLNKADMVDDEELLELVQLEVQELLEK 159
Query: 169 -GTVAENAPIIPISALHGA------------------NIDVLVKAIEDFIPTPKRDPNKP 209
P + SAL I L+ ++++IPTP+R+ +K
Sbjct: 160 YDFPGSEIPFVAGSALLALEAVANNPTIKRGEDKWVDTIYQLMDKVDEYIPTPERETDKA 219
Query: 210 PKMLVLRSFDVNKPGTPPEKLVGGVLGGSIVQGKLKVGDEIEIRPGVPYEEHGRIKYEPI 269
M V F + GT V G I +GK+KVGD IEI G+ E
Sbjct: 220 FLMAVEDVFSITGRGT--------VATGRIERGKVKVGDTIEI-VGL---------RETR 261
Query: 270 TTEIVSLQAGGQFVEEAYPGGLVGVGTKLDPYLTKGDLMAGNVVGKPGKLPP 321
T I L+ + ++EA G VG+ L + K D+ G V+ PG + P
Sbjct: 262 NTTITGLEMFQKSLDEALAGDNVGI---LVRGIQKTDIERGMVLAAPGSITP 310
>sp|P33167|EFTU_BURCE ELONGATION FACTOR TU (EF-TU) >gi|320390|pir||D60663 translation
elongation factor EF-Tu - Pseudomonas cepacia
Length = 396
Score = 123 bits (307), Expect = 3e-27
Identities = 125/440 (28%), Positives = 191/440 (43%), Gaps = 87/440 (19%)
Query: 4 KRKSRQAEVNIGMVGHVDHGKTTLTKALTGVWT-------------DTHSEELRRGITIK 50
K + + VN+G +GHVDHGKTTLT A+T V T D EE RGITI
Sbjct: 5 KFERTKPHVNVGTIGHVDHGKTTLTAAITTVLTKKFGGEAKAYDQIDAAPEEKARGITIN 64
Query: 51 IGFADAEIRRCPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMDG 110
+ E R + +D PGH + M+ GA+ MDG
Sbjct: 65 TAHVEYETAN-----------------------RHYAHVDCPGHADYVKNMITGAAQMDG 101
Query: 111 AILVIAANEPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALENYR-QIKEFIE- 168
AILV +A + P PQTREH++ + +G II+ NK + VD + LE +++E +
Sbjct: 102 AILVCSAADG-PMPQTREHILLARQVGVPYIIVFLNKCDSVDDAELLELVEMEVRELLSK 160
Query: 169 -GTVAENAPIIPISA----------LHGANIDVLVKAIEDFIPTPKRDPNKPPKMLVLRS 217
++ PI+ SA L I L A++ +IPTP+R + M V
Sbjct: 161 YDFPGDDTPIVKGSAKLALEGDTGELGEVAIMSLADALDTYIPTPERAVDGAFLMPVEDV 220
Query: 218 FDVNKPGTPPEKLVGGVLGGSIVQGKLKVGDEIEIRPGVPYEEHGRIKYEPITTEIVSLQ 277
F ++ GT V+ G + +G +KVG+EIEI P + T ++
Sbjct: 221 FSISGRGT--------VVTGRVERGIVKVGEEIEIVGIKP----------TVKTTCTGVE 262
Query: 278 AGGQFVEEAYPGGLVGV---GTKLDPYLTKGDLMAGNVVGKPGKLPPVWDSLRLEVHLLE 334
+ +++ G VG+ GTK + D+ G V+ KPG + P EV++L
Sbjct: 263 MFRKLLDQGQAGDNVGILLRGTK------REDVERGQVLAKPGSITP-HTHFTAEVYVLS 315
Query: 335 RVVGTE-----QELKVEPIKRKEVLLLNVGTARTMGLVTGLGKDEIEVKLQIPVCAEPGD 389
+ G + + R + ++ + +V I VKL P+ E G
Sbjct: 316 KDEGGRHTPFFNNYRPQFYFRTTDVTGSIELPKDKEMVMPGDNVSITVKLIAPIAMEEGL 375
Query: 390 RVAISRQIGSRWRLIGYGII 409
R AI R+ G R +G G++
Sbjct: 376 RFAI-REGG---RTVGAGVV 391
>gi|11466508 elongation factor [Reclinomonas americana]
>gi|6015085|sp|O21245|EFTU_RECAM ELONGATION FACTOR TU,
MITOCHONDRIAL >gi|7443386|pir||S78139 translation
elongation factor EF-Tu.A - Reclinomonas americana (ATCC
50394) mitochondrion >gi|2258338|gb|AAD11872.1|
(AF007261) elongation factor [Reclinomonas americana]
Length = 394
Score = 123 bits (307), Expect = 3e-27
Identities = 86/274 (31%), Positives = 139/274 (50%), Gaps = 56/274 (20%)
Query: 3 EKRKSRQAEVNIGMVGHVDHGKTTLTKALTGVWTDTHS-------------EELRRGITI 49
EK + + NIG +GHVDHGKTTLT A+T V ++T EE +RGITI
Sbjct: 4 EKFERTKPHCNIGTIGHVDHGKTTLTAAITKVLSETGGAVFTDYDQIDKAPEEKKRGITI 63
Query: 50 KIGFADAEIRRCPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMD 109
+ E + R + ID PGHE + M+ GA+ MD
Sbjct: 64 STSHVEYETTK-----------------------RHYAHIDCPGHEDYVKNMITGAAQMD 100
Query: 110 GAILVIAANEPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALENYR-QIKEFIE 168
GAILV++A + P PQTREH++ + +G ++++ NK+++V+ + L+ +++E +
Sbjct: 101 GAILVVSAVDG-PMPQTREHILLSRQVGVPSLVVFLNKVDMVNDPEMLDLVEMEVRELLL 159
Query: 169 G--TVAENAPIIPISALHGANIDV--------LVKAIEDFIPTPKRDPNKPPKMLVLRSF 218
+ PII SAL ++ L++A++++IP P+R ++P M V F
Sbjct: 160 SYKYPGDEIPIIRGSALKALQGEIEYKKSILKLMEAVDNYIPQPERSFDRPFLMPVEDVF 219
Query: 219 DVNKPGTPPEKLVGGVLGGSIVQGKLKVGDEIEI 252
+ GT V+ G + QG++K+GD +EI
Sbjct: 220 SIAGRGT--------VVTGRVEQGQIKIGDAVEI 245
>sp|P13552|EFTU_SPIPL ELONGATION FACTOR TU (EF-TU) >gi|79739|pir||S04391 translation
elongation factor EF-Tu - Spirulina platensis
>gi|47451|emb|CAA33673.1| (X15646) translation
elongation factor EF-Tu (AA 1-410) [Spirulina platensis]
Length = 410
Score = 123 bits (306), Expect = 3e-27
Identities = 129/455 (28%), Positives = 199/455 (43%), Gaps = 103/455 (22%)
Query: 4 KRKSRQAEVNIGMVGHVDHGKTTLTKALTGVWT-------------DTHSEELRRGITIK 50
K + + VNIG +GHVDHGKTTLT A+T D EE +RGITI
Sbjct: 5 KFERNKPHVNIGTIGHVDHGKTTLTAAITMTLAASGGAKARKYDDIDAAPEEKQRGITIN 64
Query: 51 IGFADAEIRRCPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMDG 110
+ +ETE R + +D PGH + M+ GA+ MDG
Sbjct: 65 TAHVE----------------------YETE-QRHYAHVDCPGHADYVKNMITGAAQMDG 101
Query: 111 AILVIAANEPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALENYR-QIKEFIEG 169
AILV++A + P PQTREH++ + +G +I++ NK ++VD E+ LE +++E +
Sbjct: 102 AILVVSAADG-PMPQTREHILLAKQVGVPSIVVFLNKADMVDDEELLELVELEVRELLSS 160
Query: 170 --TVAENAPIIPISAL-------------HGAN-----IDVLVKAIEDFIPTPKRDPNKP 209
++ PI+ SAL G N I L+ ++ +IPTP+RD +K
Sbjct: 161 YDFPGDDIPIVSGSALKALDFLTENPKTTRGENDWVDKIHALMDEVDAYIPTPERDIDKG 220
Query: 210 -PKMLVLRSFDVNKPGTPPEKLVGGVLGGSIVQGKLKVGDEIEIRPGVPYEEHGRIKYEP 268
L F + GT V I +GK+KVGD +E+ G+ +
Sbjct: 221 LLDGLWEDVFSITGRGT--------VSTAGIERGKVKVGDTVEL-IGIK---------DT 262
Query: 269 ITTEIVSLQAGGQFVEEAYPGGLVGVGTKLDPYLTKGDLMAGNVVGKPGKLPPVWDSLRL 328
TT + + + +EE G VG+ L + K D+ G V+ KP + P
Sbjct: 263 RTTTVTGAEMFQKTLEEGMAGDNVGL---LLRGIQKNDVQRGMVIAKPKSITP-HTKFEA 318
Query: 329 EVHLLERVVGTEQELKVEPIKRKEVLLLNVGTARTMGLVTGLGKDE-------------- 374
EV++L++ E+ + P + V T G + D+
Sbjct: 319 EVYILKK----EEGGRHTPFFKGYRPQFYVRTTDVTGTIDEFTADDGSTPEMVIPGDRIN 374
Query: 375 IEVKLQIPVCAEPGDRVAISRQIGSRWRLIGYGII 409
+ V+L P+ E G R AI R+ G R +G G++
Sbjct: 375 MTVQLICPIAIEQGMRFAI-REGG---RTVGAGVV 405
>sp|O50340|EFTU_FERIS ELONGATION FACTOR TU (EF-TU) >gi|2687830|emb|CAA75782.1| (Y15788)
elongation factor Tu [Fervidobacterium islandicum]
Length = 399
Score = 123 bits (305), Expect = 4e-27
Identities = 122/431 (28%), Positives = 197/431 (45%), Gaps = 78/431 (18%)
Query: 12 VNIGMVGHVDHGKTTLTKALTGV-----WTD--------THSEELRRGITIKIGFADAEI 58
+N+G +G +DHGKTTLT A+T W D EE RGITI I + +
Sbjct: 13 MNVGTIGQIDHGKTTLTAAITKYCSFFGWADYTPYEMIDKAPEERARGITINITHVEYQT 72
Query: 59 RRCPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMDGAILVIAAN 118
+ R + ID PGH + M+ GA+ MDGAILV+AA
Sbjct: 73 EK-----------------------RHYAHIDCPGHADYIKNMITGAAQMDGAILVLAAT 109
Query: 119 EPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALENYRQIKEFIE--GTVAENAP 176
+ P PQTREH++ + + +I+ NK+++VD E ++++ + + P
Sbjct: 110 DG-PMPQTREHVLLARQVNVPAMIVFINKVDMVDPELVDLVEMEVRDLLSKYEFPGDEVP 168
Query: 177 IIPISALHGANIDVLVKAIEDFIPTPKRDPNKPPKMLVLRSFD---------VNKPGTPP 227
++ SAL KAIE P DP P +L + D V+KP P
Sbjct: 169 VVRGSAL---------KAIE--APNDPNDPAYKPIKELLDAMDTYFPDPVREVDKPFLMP 217
Query: 228 EKLVGGVLG-GSIVQGKLKVGDEIEIRPGVPYEEHGRIKYEPITTEIVSLQAGGQFVEEA 286
+ V + G G++V G+++ G I+PGV E G + YE T I S++ + ++EA
Sbjct: 218 IEDVFSITGRGTVVTGRIERG---VIKPGVEAEIIG-MSYEIKKTVITSVEMFRKELDEA 273
Query: 287 YPGGLVGVGTKLDPYLTKGDLMAGNVVGKPGKLPPVWDSLRLEVHLLERVVGTEQELKVE 346
G VG L +K ++ G V+ KPG + P+ + +++L++ G +
Sbjct: 274 IAGDNVGC---LLRGSSKDEVERGQVLAKPGSITPL-KKFKANIYVLKKEEGGRHTPFTK 329
Query: 347 PIKRKEVLLLNVGTARTMGLVTG----LGKDEIEVKLQI--PVCAEPGDRVAISRQIGSR 400
K + + T + L G + D +E+ +++ PV E G R A+ R+ G
Sbjct: 330 GYKPQFYIRTADVTGEIVDLPAGVEMVMPGDNVEMTIELIYPVAIEKGMRFAV-REGG-- 386
Query: 401 WRLIGYGIIKE 411
R +G G++ E
Sbjct: 387 -RTVGAGVVSE 396
>sp|O59153|EF1A_PYRHO ELONGATION FACTOR 1-ALPHA (EF-1-ALPHA) (ELONGATION FACTOR TU)
(EF-TU) >gi|7443397|pir||G71023 translation elongation
factor aEF-1 alpha chain - Pyrococcus horikoshii
>gi|3257908|dbj|BAA30591.1| (AP000006) 428aa long
hypothetical elongation factor 1-alpha [Pyrococcus
horikoshii]
Length = 428
Score = 123 bits (305), Expect = 4e-27
Identities = 108/394 (27%), Positives = 173/394 (43%), Gaps = 102/394 (25%)
Query: 12 VNIGMVGHVDHGKTTLT-------------------------KALTGVWT-DTHSEELRR 45
VNI +GHVDHGK+T K+ W D EE R
Sbjct: 8 VNIVFIGHVDHGKSTTIGRLLYDTGNIPETIIKKFEEMGEKGKSFKFAWVMDRLKEERER 67
Query: 46 GITIKIGFADAEIRRCPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGA 105
GITI + E R ++ IDAPGH + M+ GA
Sbjct: 68 GITIDVAHTKFETPH-----------------------RYITIIDAPGHRDFVKNMITGA 104
Query: 106 SLMDGAILVIAANEPCPRPQTREHLMALQIIGQKNIIIAQNKIELVD-KEKALENYR-QI 163
S D A+LV+AA + PQT+EH + +G K+II+ NK+++V+ +K E + Q+
Sbjct: 105 SQADAAVLVVAATDGV-MPQTKEHAFLARTLGIKHIIVTINKMDMVNYDQKVFEKVKAQV 163
Query: 164 KEFIEGTVAENAPIIPISALHGANI------------DVLVKAIEDFIPTPKRDPNKPPK 211
++ ++ ++ P+IP SA +G N+ L++A+ D IP P++ +KP +
Sbjct: 164 EKLLKTLGYKDFPVIPTSAWNGDNVVKKSDKMPWYNGPTLIEAL-DQIPEPEKPIDKPLR 222
Query: 212 MLVLRSFDVNKPGTPPEKLVGGVLGGSIVQGKLKVGDEIEIRPGVPYEEHGRIKYEPITT 271
+ + + + GT P G + GKLKVGD + P I ++PI
Sbjct: 223 IPIQDVYSIKGVGTVPV--------GRVETGKLKVGDVVIFEPA------STIFHKPIQG 268
Query: 272 EIVSLQAGGQFVEEAYPGGLVGVGTKLDPYLTKGDLMAGNVVGKPGKLPPVWDSLRLEVH 331
E+ S++ + ++EA PG +G + ++K D+ G+V G K P
Sbjct: 269 EVKSIEMHHEPLQEALPGDNIGFNVR---GVSKNDIKRGDVAGHTDKPP----------- 314
Query: 332 LLERVVGTEQELKVEPIKRKEVLLLNVGTARTMG 365
VV T+ K ++++LN TA T+G
Sbjct: 315 ---TVVRTKDTFKA------QIIVLNHPTAITVG 339
>pir||C83112 elongation factor Tu PA4265 [imported] - Pseudomonas aeruginosa
(strain PAO1) >gi|11348482|pir||F83111 elongation factor
Tu PA4277 [imported] - Pseudomonas aeruginosa (strain
PAO1) >gi|9950483|gb|AAG07653.1|AE004842_2 (AE004842)
elongation factor Tu [Pseudomonas aeruginosa]
>gi|9950496|gb|AAG07665.1|AE004843_7 (AE004843)
elongation factor Tu [Pseudomonas aeruginosa]
Length = 397
Score = 123 bits (305), Expect = 4e-27
Identities = 108/366 (29%), Positives = 169/366 (45%), Gaps = 79/366 (21%)
Query: 3 EKRKSRQAEVNIGMVGHVDHGKTTLTKALTGVWTDTHS-------------EELRRGITI 49
EK + + VN+G +GHVDHGKTTLT ALT V +DT EE RGITI
Sbjct: 4 EKFERNKPHVNVGTIGHVDHGKTTLTAALTKVCSDTWGGSARAFDQIDNAPEEKARGITI 63
Query: 50 KIGFADAEIRRCPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMD 109
+ + VR + +D PGH + M+ GA+ MD
Sbjct: 64 NTSHVEYD-----------------------SAVRHYAHVDCPGHADYVKNMITGAAQMD 100
Query: 110 GAILVIAANEPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALENYR-QIKEFIE 168
GAILV +A + P PQTREH++ + +G I++ NK ++VD + LE ++++ +
Sbjct: 101 GAILVCSAADG-PMPQTREHILLSRQVGVPYIVVFLNKADMVDDAELLELVEMEVRDLLN 159
Query: 169 --GTVAENAPII---PISALHGAN--------IDVLVKAIEDFIPTPKRDPNKPPKMLVL 215
++ PII + AL G + + LV+ ++ +IP P R ++P M +
Sbjct: 160 TYDFPGDDTPIIIGSALMALEGKDDNGIGVSAVQKLVETLDSYIPEPVRAIDQPFLMPIE 219
Query: 216 RSFDVNKPGTPPEKLVGGVLGGSIVQGKLKVGDEIEIRPGVPYEEHGRIKYEPITTEIVS 275
F ++ GT V+ G + +G +KV +E+EI IK TT
Sbjct: 220 DVFSISGRGT--------VVTGRVERGIIKVQEEVEI---------VGIKATTKTT-CTG 261
Query: 276 LQAGGQFVEEAYPGGLVGV---GTKLDPYLTKGDLMAGNVVGKPGKLPPVWDSLRLEVHL 332
++ + ++E G VG+ GTK + D+ G V+ KPG + P EV++
Sbjct: 262 VEMFRKLLDEGRAGENVGILLRGTK------REDVERGQVLAKPGTIKP-HTKFECEVYV 314
Query: 333 LERVVG 338
L + G
Sbjct: 315 LSKEEG 320
>sp|P26751|EF1A_PYRWO ELONGATION FACTOR 1-ALPHA (EF-1-ALPHA) (ELONGATION FACTOR TU)
(EF-TU) >gi|99234|pir||S19000 translation elongation
factor aEF-1 alpha chain - Pyrococcus woesei
>gi|45947|emb|CAA42517.1| (X59857) elongation factor
1alpha [Pyrococcus woesei]
Length = 430
Score = 122 bits (304), Expect = 6e-27
Identities = 109/402 (27%), Positives = 175/402 (43%), Gaps = 102/402 (25%)
Query: 4 KRKSRQAEVNIGMVGHVDHGKTTLT-------------------------KALTGVWT-D 37
K + VNI +GHVDHGK+T K+ W D
Sbjct: 2 KMPKDKPHVNIVFIGHVDHGKSTTIGRLLYDTGNIPEQIIKKFEEMGEKGKSFKFAWVMD 61
Query: 38 THSEELRRGITIKIGFADAEIRRCPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEAL 97
EE RGITI + E R ++ IDAPGH
Sbjct: 62 RLREERERGITIDVAHTKFETPH-----------------------RYITIIDAPGHRDF 98
Query: 98 MTTMLAGASLMDGAILVIAANEPCPRPQTREHLMALQIIGQKNIIIAQNKIELVD-KEKA 156
+ M+ GAS D A+LV+AA + PQT+EH + +G K+II+A NK+++V+ +K
Sbjct: 99 VKNMITGASQADAAVLVVAATDGV-MPQTKEHAFLARTLGIKHIIVAINKMDMVNYNQKR 157
Query: 157 LENYR-QIKEFIEGTVAENAPIIPISALHGANI------------DVLVKAIEDFIPTPK 203
E + Q+++ ++ ++ P+IPISA G N+ L++A+ D IP P+
Sbjct: 158 FEEVKAQVEKLLKMLGYKDFPVIPISAWEGENVVKKSDKMPWYNGPTLIEAL-DQIPEPE 216
Query: 204 RDPNKPPKMLVLRSFDVNKPGTPPEKLVGGVLGGSIVQGKLKVGDEIEIRPGVPYEEHGR 263
+ +KP ++ + + + GT P G + GKL+VG+ + P
Sbjct: 217 KPVDKPLRIPIQDVYSIKGVGTVPV--------GRVETGKLRVGEVVIFEPA------ST 262
Query: 264 IKYEPITTEIVSLQAGGQFVEEAYPGGLVGVGTKLDPYLTKGDLMAGNVVGKPGKLPPVW 323
I ++PI E+ S++ + +EEA PG +G + ++K D+ G+V G P
Sbjct: 263 IFHKPIQGEVKSIEMHHEPLEEALPGDNIGFNVR---GVSKNDIKRGDVAGHTTNPP--- 316
Query: 324 DSLRLEVHLLERVVGTEQELKVEPIKRKEVLLLNVGTARTMG 365
VV T+ K ++++LN TA T+G
Sbjct: 317 -----------TVVRTKDTFKA------QIIVLNHPTAITVG 341
>gi|7524809 protein synthesis elongation factor Tu [Chlorella vulgaris]
>gi|3023690|sp|P56292|EFTU_CHLVU ELONGATION FACTOR TU
(EF-TU) >gi|7443410|pir||T07239 translation elongation
factor EF-Tu - Chlorella vulgaris chloroplast
>gi|2224402|dbj|BAA57886.1| (AB001684) protein synthesis
elongation factor Tu [Chlorella vulgaris]
Length = 409
Score = 122 bits (304), Expect = 6e-27
Identities = 111/370 (30%), Positives = 170/370 (45%), Gaps = 80/370 (21%)
Query: 3 EKRKSRQAEVNIGMVGHVDHGKTTLTKALTGVWT-------------DTHSEELRRGITI 49
EK + ++ VNIG +GHVDHGKTTLT A+T D+ EE RGITI
Sbjct: 4 EKFQRKKPHVNIGTIGHVDHGKTTLTAAITMALAARGGAKGRKYDDIDSAPEEKARGITI 63
Query: 50 KIGFADAEIRRCPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMD 109
+ +ETE R + +D PGH + M+ GA+ MD
Sbjct: 64 NTAHVE----------------------YETE-NRHYAHVDCPGHADYVKNMITGAAQMD 100
Query: 110 GAILVIAANEPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALENYR-QIKEFIE 168
G ILV++ + P PQT+EHL+ + +G NI++ NK + VD + LE +I+E ++
Sbjct: 101 GGILVVSGADG-PMPQTKEHLLLAKQVGVPNIVVFLNKEDQVDDAELLELLELEIRETLD 159
Query: 169 --GTVAENAPIIPISAL-------------HGAN-----IDVLVKAIEDFIPTPKRDPNK 208
+ PII SAL G N I L+ ++ +IPTP+R+ K
Sbjct: 160 KYEFPGDEIPIISGSALLALEALTENPETKPGDNKWVDKIYNLMDQVDSYIPTPERETEK 219
Query: 209 PPKMLVLRSFDVNKPGTPPEKLVGGVLGGSIVQGKLKVGDEIEIRPGVPYEEHGRIKYEP 268
P M V F + GT V G + +G +K+GD +E+ G+ +
Sbjct: 220 PFLMAVEDVFSITGRGT--------VATGRVERGCVKIGDTVEL-VGL---------RDT 261
Query: 269 ITTEIVSLQAGGQFVEEAYPGGLVGVGTKLDPYLTKGDLMAGNVVGKPGKLPPVWDSLRL 328
TT + L+ + ++E+ G VG+ L + K D+ G V+ KPG + P
Sbjct: 262 KTTTVTGLEMFQKTLDESVAGDNVGI---LLRGVQKIDIERGMVLAKPGSILP-HTKFEA 317
Query: 329 EVHLLERVVG 338
+V++L + G
Sbjct: 318 QVYVLNKEEG 327
>pir||F81685 translation elongation factor Tu TC0596 [imported] - Chlamydia
muridarum (strain Nigg) >gi|7190634|gb|AAF39428.1|
(AE002328) translation elongation factor Tu [Chlamydia
muridarum]
Length = 399
Score = 122 bits (304), Expect = 6e-27
Identities = 131/446 (29%), Positives = 199/446 (44%), Gaps = 95/446 (21%)
Query: 3 EKRKSRQAEVNIGMVGHVDHGKTTLTKALTGVWT-------------DTHSEELRRGITI 49
E + + +NIG +GHVDHGKTTLT A+T + D EE RGITI
Sbjct: 9 ETFQRNKPHINIGTIGHVDHGKTTLTAAITRALSGDGLADFRDYSSIDNTPEEKARGITI 68
Query: 50 KIGFADAEIRRCPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMD 109
+ E PN R + +D PGH + M+ GA+ MD
Sbjct: 69 NASHVEYE---TPN--------------------RHYAHVDCPGHADYVKNMITGAAQMD 105
Query: 110 GAILVIAANEPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKA-----LENYRQIK 164
GAILV++A + PQT+EH++ + +G I++ NKI+++ +E A +E ++
Sbjct: 106 GAILVVSATDGA-MPQTKEHILLARQVGVPYIVVFLNKIDMISEEDAELVDLVE--MELS 162
Query: 165 EFIEGTVAENAPIIPISALHGANIDV--------LVKAIEDFIPTPKRDPNKPPKMLVLR 216
E +E + PII SAL D L++A++D IPTP+R+ +KP M +
Sbjct: 163 ELLEEKGYKGCPIIRGSALKALEGDAAYIEKVRELMQAVDDNIPTPEREIDKPFLMPIED 222
Query: 217 SFDVNKPGTPPEKLVGGVLGGSIVQGKLKVGDEIEIRPGVPYEEHGRIKYEPITTEIVSL 276
F ++ GT V+ G I +G +KV D++++ G+ R E I T
Sbjct: 223 VFSISGRGT--------VVTGRIERGIVKVSDKVQL-VGL------RDTKETIVT----- 262
Query: 277 QAGGQFVEEAYPGGLVG--VGTKLDPYLTKGDLMAGNVVGKPGKLPPVWDSLRLEVHLLE 334
G + + P G G VG L + K D+ G VV P + P + V++L+
Sbjct: 263 --GVEMFRKELPEGRAGENVGLLLRG-IGKNDVERGMVVCLPNSVKP-HTQFKCAVYVLQ 318
Query: 335 RVVGTEQELKVEPI---KRKEVLLLNVGTARTMGLVTGL------GKDEIEVKLQIPVCA 385
+ E+ + +P R + + L G+ E EV+L PV
Sbjct: 319 K----EEXGRHKPFFTGYRPQFFFRTTDVTGVVTLPEGVEMVMPGDNVEFEVQLISPVAL 374
Query: 386 EPGDRVAISRQIGSRWRLIGYGIIKE 411
E G R AI R+ G R IG G I +
Sbjct: 375 EEGMRFAI-REGG---RTIGAGTISK 396
>sp|P42481|EFTU_THICU ELONGATION FACTOR TU (EF-TU) >gi|587579|emb|CAA54198.1| (X76871)
elongation factor Tu [Thiomonas cuprina]
Length = 396
Score = 122 bits (303), Expect = 8e-27
Identities = 124/440 (28%), Positives = 193/440 (43%), Gaps = 87/440 (19%)
Query: 4 KRKSRQAEVNIGMVGHVDHGKTTLTKALTGVWT-------------DTHSEELRRGITIK 50
K + + VN+G +GHVDHGKTTLT A+T V + D EE RGITI
Sbjct: 5 KFERTKPHVNVGTIGHVDHGKTTLTAAITTVLSSKFGGEAKAYDQIDAAPEEKARGITIN 64
Query: 51 IGFADAEIRRCPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMDG 110
+ E R + +D PGH + M+ GA+ MDG
Sbjct: 65 TAHVEYETAN-----------------------RHYAHVDCPGHADYVKNMITGAAQMDG 101
Query: 111 AILVIAANEPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALENYR-QIKEFIE- 168
AILV++A + P PQTREH++ + +G II+ NK ++VD + LE +++E +
Sbjct: 102 AILVVSAADG-PMPQTREHILLARQVGVPYIIVFLNKCDMVDDAELLELVEMEVRELLSK 160
Query: 169 -GTVAENAPIIPISA----------LHGANIDVLVKAIEDFIPTPKRDPNKPPKMLVLRS 217
++ PII SA L I L +A++ +IPTP+R + M V
Sbjct: 161 YDFPGDDTPIIKGSAKLALEGDKGELGEGAILKLAEALDTYIPTPERAVDGAFLMPVEDV 220
Query: 218 FDVNKPGTPPEKLVGGVLGGSIVQGKLKVGDEIEIRPGVPYEEHGRIKYEPITTEIVSLQ 277
F ++ GT V+ G + +G +KVG+EIEI P + T ++
Sbjct: 221 FSISGRGT--------VVTGRVERGIIKVGEEIEIVGLKP----------TLKTTCTGVE 262
Query: 278 AGGQFVEEAYPGGLVGV---GTKLDPYLTKGDLMAGNVVGKPGKLPPVWDSLRLEVHLLE 334
+ +++ G VG+ GTK + ++ G V+ KPG + P EV++L
Sbjct: 263 MFRKLLDQGQAGDNVGILLRGTK------REEVERGQVLCKPGSIKP-HTHFTAEVYVLS 315
Query: 335 RVVGTE-----QELKVEPIKRKEVLLLNVGTARTMGLVTGLGKDEIEVKLQIPVCAEPGD 389
+ G + + R + + + +V I VKL P+ E G
Sbjct: 316 KDEGGRHTPFFNNYRPQFYFRTTDVTGAIELPKDKEMVMPGDNVSITVKLIAPIAMEEGL 375
Query: 390 RVAISRQIGSRWRLIGYGII 409
R AI R+ G R +G G++
Sbjct: 376 RFAI-REGG---RTVGAGVV 391
>sp|P41342|EFTU_TOBAC ELONGATION FACTOR TU, CHLOROPLAST PRECURSOR (EF-TU)
>gi|478398|pir||JQ2240 translation elongation factor
EF-Tu precursor - common tobacco chloroplast
>gi|480040|pir||S36183 translation elongation factor
EF-Tu.A precursor, chloroplast - wood tobacco
>gi|170344|gb|AAA18546.1| (M94204) translation
elongation factor EF-Tu [Nicotiana tabacum]
>gi|459239|dbj|BAA02027.1| (D11469) chloroplast
elongation factor TuA(EF-TuA) [Nicotiana sylvestris]
Length = 478
Score = 122 bits (303), Expect = 8e-27
Identities = 122/452 (26%), Positives = 199/452 (43%), Gaps = 94/452 (20%)
Query: 4 KRKSRQAEVNIGMVGHVDHGKTTLTKALTGVWT-------------DTHSEELRRGITIK 50
K + ++ VNIG +GHVDHGKTTLT ALT D EE RGITI
Sbjct: 74 KFERKKPHVNIGTIGHVDHGKTTLTAALTMALASMGNSAPKKYDEIDAAPEERARGITIN 133
Query: 51 IGFADAEIRRCPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMDG 110
+ +ETE R + +D PGH + M+ GA+ MDG
Sbjct: 134 TATVE----------------------YETE-NRHYAHVDCPGHADYVKNMITGAAQMDG 170
Query: 111 AILVIAANEPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALENYR-QIKEFIEG 169
AILV + + P PQT+EH++ + +G N+++ NK + VD E+ L+ +++E +
Sbjct: 171 AILVCSGADG-PMPQTKEHILLAKQVGVPNMVVFLNKQDQVDDEELLQLVELEVRELLSS 229
Query: 170 --TVAENAPIIPISAL-------------HGAN-----IDVLVKAIEDFIPTPKRDPNKP 209
++ PII SAL G N I L+ A++ +IP P R P
Sbjct: 230 YEFPGDDIPIISGSALLALEALMANPSIKRGENQWVDKIYELMDAVDSYIPIPVRQTELP 289
Query: 210 PKMLVLRSFDVNKPGTPPEKLVGGVLGGSIVQGKLKVGDEIEIRPGVPYEEHGRIKYEPI 269
M + F + GT V G + +G +++GD ++I G+ +
Sbjct: 290 FLMAIEDVFSITGRGT--------VATGRVERGTVRIGDTVDI-VGLK---------DTR 331
Query: 270 TTEIVSLQAGGQFVEEAYPGGLVGVGTKLDPYLTKGDLMAGNVVGKPGKLPPVWDSLRLE 329
+T + ++ + ++EA G VG+ L + K D+ G V+ KPG + P
Sbjct: 332 STTVTGVEMFQKILDEAMAGDNVGL---LLRGIQKIDIQRGMVLAKPGTITP-HTKFEAI 387
Query: 330 VHLLERVVGTEQELKVEPIKRKEVLLLNVGTARTMGLVTGLGKD----------EIEVKL 379
V++L++ G + + + T + + T G++ + V+L
Sbjct: 388 VYVLKKEEGGRHSPFFSGYRPQFYMRTTDVTGKVTSITTDKGEESKMVMPGDRVNLVVEL 447
Query: 380 QIPVCAEPGDRVAISRQIGSRWRLIGYGIIKE 411
+PV E G R AI R+ G + +G G+I++
Sbjct: 448 IMPVACEQGMRFAI-REGG---KTVGAGVIQK 475
>pdb|1EFM| Trypsin-Modified Elongation Factor Tu (EF-Tu-GDP)
Length = 393
Score = 122 bits (302), Expect = 1e-26
Identities = 103/349 (29%), Positives = 162/349 (45%), Gaps = 48/349 (13%)
Query: 3 EKRKSRQAEVNIGMVGHVDHGKTTLTKALTGVWTDTHSEELRRGITIKIGFADAEIRRCP 62
EK + + VN+G +GHVDHGKTTLT A+T V T+ R
Sbjct: 3 EKFERTKPHVNVGTIGHVDHGKTTLTAAITTVLAKTYGGAARXXXXXXXXXXXXXXGITI 62
Query: 63 NCG--RYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMDGAILVIAANEP 120
N Y T R + +D PGH + M+ GA+ MDGAILV+AA +
Sbjct: 63 NTSHVEYDTP------------TRHYAHVDCPGHADYVKNMITGAAQMDGAILVVAATDG 110
Query: 121 CPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALENYR-QIKEFIE--GTVAENAPI 177
P PQTREH++ + +G II+ NK ++VD E+ LE +++E + ++ PI
Sbjct: 111 -PMPQTREHILLGRQVGVPYIIVFLNKCDMVDDEELLELVEMEVRELLSQYDFPGDDTPI 169
Query: 178 IPISALHG--------ANIDVLVKAIEDFIPTPKRDPNKPPKMLVLRSFDVNKPGTPPEK 229
+ SAL A I L ++ +IP P+R +KP + + F ++ GT
Sbjct: 170 VRGSALKALEGDAEWEAKILELAGFLDSYIPEPERAIDKPFLLPIEDVFSISGRGT---- 225
Query: 230 LVGGVLGGSIVQGKLKVGDEIEIRPGVPYEEHGRIKYEPITTEIVSLQAGGQFVEEAYPG 289
V+ G + +G +KVG+E+EI G+ E + ++ + ++E G
Sbjct: 226 ----VVTGRVERGIIKVGEEVEI-VGIK---------ETQKSTCTGVEMFRKLLDEGRAG 271
Query: 290 GLVGVGTKLDPYLTKGDLMAGNVVGKPGKLPPVWDSLRLEVHLLERVVG 338
VGV L + + ++ G V+ KPG + P EV++L + G
Sbjct: 272 ENVGV---LLRGIKREEIERGQVLAKPGTIKP-HTKFESEVYILSKDEG 316
>gi|11466993 elongation factor Ef-Tu [Euglena gracilis]
>gi|119202|sp|P02991|EFTU_EUGGR ELONGATION FACTOR TU
(EF-TU) >gi|72865|pir||EFEGT translation elongation
factor EF-Tu - Euglena gracilis chloroplast
>gi|311712|emb|CAA24925.1| (X00044) elongation factor Tu
[Euglena gracilis] >gi|312223|emb|CAA29599.1| (X06254)
EF-Tu [Euglena gracilis] >gi|415743|emb|CAA50087.1|
(X70810) elongation factor Ef-Tu [Euglena gracilis]
>gi|1163049|emb|CAA77904.1| (Z11874) elongation factor
Tu [Euglena gracilis]
Length = 409
Score = 122 bits (302), Expect = 1e-26
Identities = 127/457 (27%), Positives = 199/457 (42%), Gaps = 106/457 (23%)
Query: 3 EKRKSRQAEVNIGMVGHVDHGKTTLTKALTGVWT-------------DTHSEELRRGITI 49
+K + + +NIG +GHVDHGKTTLT A+T D+ EE RGITI
Sbjct: 4 QKFERTKPHINIGTIGHVDHGKTTLTAAITMALAATGNSKAKRYEDIDSAPEEKARGITI 63
Query: 50 KIGFADAEIRRCPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMD 109
+ E + R + +D PGH + M+ GA+ MD
Sbjct: 64 NTAHVEYETKN-----------------------RHYAHVDCPGHADYVKNMITGAAQMD 100
Query: 110 GAILVIAANEPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALENYR-QIKEFIE 168
GAILV++A + P PQT+EH++ + +G NI++ NK + VD + LE +I+E +
Sbjct: 101 GAILVVSAADG-PMPQTKEHILLAKQVGVPNIVVFLNKEDQVDDSELLELVELEIRETLS 159
Query: 169 G--TVAENAPIIPISAL-------------HGAN-----IDVLVKAIEDFIPTPKRDPNK 208
++ P+IP SAL G N I L+ ++ +IPTP RD K
Sbjct: 160 NYEFPGDDIPVIPGSALLSVEALTKNPKITKGENKWVDKILNLMDQVDSYIPTPTRDTEK 219
Query: 209 PPKMLVLRSFDVNKPGTPPEKLVGGVLGGSIVQGKLKVGDEIEIRPGVPYEEHGRIKYEP 268
M + + GT V G + +G +KVG+ +E+ G+ +
Sbjct: 220 DFLMAIEDVLSITGRGT--------VATGRVERGTIKVGETVEL-VGLK---------DT 261
Query: 269 ITTEIVSLQAGGQFVEEAYPGGLVGVGTKLDPYLTKGDLMAGNVVGKPGKLPP--VWDSL 326
+T I L+ + ++EA G VGV L + K D+ G V+ KP + P +DS
Sbjct: 262 RSTTITGLEMFQKSLDEALAGDNVGV---LLRGIQKNDVERGMVLAKPRTINPHTKFDS- 317
Query: 327 RLEVHLLERVVGTEQELKVEPIKRKEVLLLNVGTARTMGLVTGLGKD------------- 373
+V++L + G E + + V T G + D
Sbjct: 318 --QVYILTKEEGGRHTPFFEGYRPQ----FYVRTTDVTGKIESFRSDNDNPAQMVMPGDR 371
Query: 374 -EIEVKLQIPVCAEPGDRVAISRQIGSRWRLIGYGII 409
+++V+L P+ E G R AI R+ G R +G G++
Sbjct: 372 IKMKVELIQPIAIEKGMRFAI-REGG---RTVGAGVV 404
>gb|AAD40614.1| (AF115283) elongation factor Tu [Leptospira interrogans]
Length = 401
Score = 122 bits (302), Expect = 1e-26
Identities = 119/450 (26%), Positives = 189/450 (41%), Gaps = 96/450 (21%)
Query: 3 EKRKSRQAEVNIGMVGHVDHGKTTLTKALTGVWT---------------DTHSEELRRGI 47
EK + +N+G +GHVDHGKTTLT A+T D EE RGI
Sbjct: 4 EKFDRSKPHLNVGTIGHVDHGKTTLTAAITTTLAKAIGGKNKAVAYDQIDNAPEEKARGI 63
Query: 48 TIKIGFADAEIRRCPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASL 107
TI + E R + +D PGH + M+ GA+
Sbjct: 64 TIATSHQEYETAN-----------------------RHYAHVDCPGHADYVKNMITGAAQ 100
Query: 108 MDGAILVIAANEPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALENYRQIKEFI 167
MD AILV++A + P PQT+EH++ + +G +I+ NK +++ ++ E ++ +
Sbjct: 101 MDAAILVVSATDG-PMPQTKEHILLARQVGVPYVIVFINKADMLAADERAEMIEMVEMDV 159
Query: 168 EGTV------AENAPII---PISALHGANIDV-------LVKAIEDFIPTPKRDPNKPPK 211
+ + PI+ + AL G ++ L++A++ F+P PKR +KP
Sbjct: 160 RELLNKYSFPGDTTPIVHGSAVKALEGDESEIGMPAILKLMEALDTFVPNPKRVIDKPFL 219
Query: 212 MLVLRSFDVNKPGTPPEKLVGGVLGGSIVQGKLKVGDEIEIRPGVPYEEHGRIKYEPIT- 270
M V F + GT V G + QG LKV DE+EI I P T
Sbjct: 220 MPVEDVFSITGRGT--------VATGRVEQGVLKVNDEVEI-----------IGIRPTTK 260
Query: 271 TEIVSLQAGGQFVEEAYPGGLVGV---GTKLDPYLTKGDLMAGNVVGKPGKLPPVWDSLR 327
T + ++ + +++A G +G GTK K ++ G V+ KPG + P
Sbjct: 261 TVVTGIEMFRKLLDQAEAGDNIGALLRGTK------KEEIERGQVLAKPGSITP-HKKFA 313
Query: 328 LEVHLLERVVGTEQELKVEPIKRKEVLLLNVGTARTMGLVTGL------GKDEIEVKLQI 381
EV++L + G + R + L G+ + V+L
Sbjct: 314 AEVYVLTKDEGGRHTPFINNY-RPQFYFRTTDVTGVCNLPNGVEMVMPGDNVSLTVELIS 372
Query: 382 PVCAEPGDRVAISRQIGSRWRLIGYGIIKE 411
P+ + G + AI R+ G R IG G++ E
Sbjct: 373 PIAMDKGLKFAI-REGG---RTIGSGVVAE 398
>pir||G82337 translation elongation factor EF-Tu VC0321 [imported] - Vibrio
cholerae (group O1 strain N16961)
>gi|9654734|gb|AAF93494.1| (AE004120) elongation factor
Tu [Vibrio cholerae]
Length = 394
Score = 122 bits (302), Expect = 1e-26
Identities = 109/363 (30%), Positives = 164/363 (45%), Gaps = 76/363 (20%)
Query: 3 EKRKSRQAEVNIGMVGHVDHGKTTLTKALTGVWT-------------DTHSEELRRGITI 49
EK + + VN+G +GHVDHGKTTLT A+ V D EE RGITI
Sbjct: 4 EKFERTKPHVNVGTIGHVDHGKTTLTAAICTVLAKVYGGKARDFASIDNAPEERERGITI 63
Query: 50 KIGFADAEIRRCPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMD 109
+ + PN R + +D PGH + M+ GA+ MD
Sbjct: 64 NTSHVEYD---TPN--------------------RHYAHVDCPGHADYVKNMITGAAQMD 100
Query: 110 GAILVIAANEPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALENYR-QIKEFIE 168
G ILV+AA + PQTREH++ + +G II+ NK ++VD E+ LE +++E +
Sbjct: 101 GGILVVAATDG-RMPQTREHILLGRQVGIPYIIVFMNKCDMVDDEELLELVEMEVRELLS 159
Query: 169 --GTVAENAPIIPISALHGAN--------IDVLVKAIEDFIPTPKRDPNKPPKMLVLRSF 218
++ P+I SAL N I L +A++ +IP P+R + M + F
Sbjct: 160 EYDFPGDDLPVIQGSALGALNGEAQWEAKIVELAEALDTYIPEPERAVDMAFLMPIEDVF 219
Query: 219 DVNKPGTPPEKLVGGVLGGSIVQGKLKVGDEIEIRPGVPYEEHGRIKYEPITTEIVSLQA 278
+ GT V+ G I +G LKVGDE+ I G+ E + T ++
Sbjct: 220 SIQGRGT--------VVTGRIERGILKVGDEVAI-VGIK---------ETVKTTCTGVEM 261
Query: 279 GGQFVEEAYPGGLVGV---GTKLDPYLTKGDLMAGNVVGKPGKLPPVWDSLRLEVHLLER 335
+ ++E G VG GTK + ++ G V+ KPG + P EV++L +
Sbjct: 262 FRKLLDEGRAGENVGALLRGTK------REEVERGQVLAKPGSITP-HTKFESEVYVLSK 314
Query: 336 VVG 338
G
Sbjct: 315 DEG 317
>sp|P17745|EFTU_ARATH ELONGATION FACTOR TU, CHLOROPLAST PRECURSOR (EF-TU)
>gi|81607|pir||S09152 translation elongation factor
EF-Tu precursor, chloroplast - Arabidopsis thaliana
>gi|22565|emb|CAA36498.1| (X52256) elongation factor Tu
precursor [Arabidopsis thaliana]
>gi|5738381|emb|CAB45802.2| (AL080253) translation
elongation factor EF-Tu precursor, chloroplast
[Arabidopsis thaliana] >gi|7268831|emb|CAB79036.1|
(AL161552) translation elongation factor EF-Tu
precursor, chloroplast [Arabidopsis thaliana]
>gi|226817|prf||1607332A elongation factor Tu
[Arabidopsis thaliana]
Length = 476
Score = 121 bits (301), Expect = 1e-26
Identities = 122/451 (27%), Positives = 201/451 (44%), Gaps = 96/451 (21%)
Query: 4 KRKSRQAEVNIGMVGHVDHGKTTLTKALTGVWT-------------DTHSEELRRGITIK 50
K + ++ VNIG +GHVDHGKTTLT ALT D EE RGITI
Sbjct: 72 KFERKKPHVNIGTIGHVDHGKTTLTAALTMALASIGSSVAKKYDEIDAAPEERARGITIN 131
Query: 51 IGFADAEIRRCPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMDG 110
+ +ETE R + +D PGH + M+ GA+ MDG
Sbjct: 132 TATVE----------------------YETE-NRHYAHVDCPGHADYVKNMITGAAQMDG 168
Query: 111 AILVIAANEPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALENYR-QIKEFIEG 169
AILV++ + P PQT+EH++ + +G ++++ NK + VD + LE +++E +
Sbjct: 169 AILVVSGADG-PMPQTKEHILLAKQVGVPDMVVFLNKEDQVDDAELLELVELEVRELLSS 227
Query: 170 TV--AENAPIIPISAL-------------HGAN-----IDVLVKAIEDFIPTPKRDPNKP 209
++ PII SAL G N I L+ A++D+IP P+R P
Sbjct: 228 YEFNGDDIPIISGSALLAVETLTENPKVKRGDNKWVDKIYELMDAVDDYIPIPQRQTELP 287
Query: 210 PKMLVLRSFDVNKPGTPPEKLVGGVLGGSIVQGKLKVGDEIEIRPGVPYEEHGRIKYEPI 269
+ V F + GT V G + +G +KVG+ +++ G+ E
Sbjct: 288 FLLAVEDVFSITGRGT--------VATGRVERGTVKVGETVDL-VGL---------RETR 329
Query: 270 TTEIVSLQAGGQFVEEAYPGGLVGVGTKLDPYLTKGDLMAGNVVGKPGKLPPVWDSLRLE 329
+ + ++ + ++EA G VG+ L + K D+ G V+ KPG + P
Sbjct: 330 SYTVTGVEMFQKILDEALAGDNVGL---LLRGIQKADIQRGMVLAKPGSITP-HTKFEAI 385
Query: 330 VHLLERVVGTEQE-----------LKVEPIKRKEVLLLNVGTARTMGLVTGLGKDEIEVK 378
+++L++ G ++ + K ++N + ++ G + +I V+
Sbjct: 386 IYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGKVTKIMNDKDEESKMVMPG-DRVKIVVE 444
Query: 379 LQIPVCAEPGDRVAISRQIGSRWRLIGYGII 409
L +PV E G R AI R+ G + +G G+I
Sbjct: 445 LIVPVACEQGMRFAI-REGG---KTVGAGVI 471
>emb|CAB53113.1| (AJ245645) protein synthesis elongation factor Tu [Prototheca
wickerhamii]
Length = 409
Score = 121 bits (301), Expect = 1e-26
Identities = 123/450 (27%), Positives = 201/450 (44%), Gaps = 94/450 (20%)
Query: 4 KRKSRQAEVNIGMVGHVDHGKTTLTKALTGVWT-------------DTHSEELRRGITIK 50
K + ++ VNIG +GHVDHGKTTLT A+T D+ EE RGITI
Sbjct: 5 KFERKKPHVNIGTIGHVDHGKTTLTAAITMALAARGGGKGKKYAEIDSAPEEKARGITIN 64
Query: 51 IGFADAEIRRCPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMDG 110
+ +ETE R + +D PGH + M+ GA+ MDG
Sbjct: 65 TAHVE----------------------YETE-SRHYAHVDCPGHADYVKNMITGAAQMDG 101
Query: 111 AILVIAANEPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALENYR-QIKEFIE- 168
AILV++ + P PQT+EH++ + +G NI++ NK + VD + +E +++E ++
Sbjct: 102 AILVVSGADG-PMPQTKEHILLAKQVGVPNIVVFINKEDQVDDIELIELVELEVRETLQR 160
Query: 169 -GTVAENAPIIPISAL-------------HGAN-----IDVLVKAIEDFIPTPKRDPNKP 209
+ P+IP SAL G N I L+ ++ +IPTPKR+ KP
Sbjct: 161 YDFPGDEVPMIPGSALMALTALTDNPKIKPGENKWVDKIYNLMDIVDSYIPTPKRNIEKP 220
Query: 210 PKMLVLRSFDVNKPGTPPEKLVGGVLGGSIVQGKLKVGDEIEIRPGVPYEEHGRIKYEPI 269
M + F + GT V G + +G +K+GD +EI G+ G K
Sbjct: 221 FLMAIEDVFSITGRGT--------VATGRVERGVVKIGDSVEI-VGL-----GATK---- 262
Query: 270 TTEIVSLQAGGQFVEEAYPGGLVGVGTKLDPYLTKGDLMAGNVVGKPGKLPPVWDSLRLE 329
T + L+ + ++E+ G VG+ L + K ++ G V+ KP + P + +
Sbjct: 263 ITTVTGLEMFQKTLDESIAGDNVGI---LLRGIQKTEIQRGMVLAKPKSITP-HTNFEAQ 318
Query: 330 VHLLERVVGTEQELKVEPIKRKEVLLLNVGTARTMGLVTGLGK--------DEIEVKLQI 381
V++L + G + + + T + T G+ D I++K ++
Sbjct: 319 VYVLNKEEGGRDTPFFSGYRPQFYVRTTDVTGKIESFCTDAGEPIKMVLPGDRIKMKAEL 378
Query: 382 --PVCAEPGDRVAISRQIGSRWRLIGYGII 409
P+ E R AI R+ G + +G G++
Sbjct: 379 IQPIAIERNMRFAI-REGG---KTVGAGVV 404
>gb|AAG09263.1| (AF176664) Eftu [EDTA-degrading bacterium BNC1]
Length = 391
Score = 121 bits (301), Expect = 1e-26
Identities = 100/356 (28%), Positives = 170/356 (47%), Gaps = 67/356 (18%)
Query: 4 KRKSRQAEVNIGMVGHVDHGKTTLTKALTGVW--------TDTHSEELRRGITIKIGFAD 55
K + + VNIG +GHVDHGKT+LT A+T + D EE RGITI +
Sbjct: 5 KFERTKPHVNIGTIGHVDHGKTSLTAAITKYFGEFKAYDQIDAAPEEKARGITISTAHVE 64
Query: 56 AEIRRCPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMDGAILVI 115
+ETE R + +D PGH + M+ GA+ MDGAILV+
Sbjct: 65 ----------------------YETE-NRHYAHVDCPGHADYVKNMITGAAQMDGAILVV 101
Query: 116 AANEPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALENYR-QIKEFIE--GTVA 172
+A + P PQTREH++ + +G I++ NK++ VD + LE +I+E +
Sbjct: 102 SAADG-PMPQTREHILLARQVGVPAIVVFLNKVDQVDDPELLELVELEIRELLSKYEFPG 160
Query: 173 ENAPII---PISALHGANIDV-------LVKAIEDFIPTPKRDPNKPPKMLVLRSFDVNK 222
++ PI+ ++AL +N ++ L+ ++ +IPTP+R ++P M + F ++
Sbjct: 161 DDIPIVKGSALAALEDSNKEIGEDAVRQLMAEVDKYIPTPERPIDQPFLMPIEDVFSISG 220
Query: 223 PGTPPEKLVGGVLGGSIVQGKLKVGDEIEIRPGVPYEEHGRIKYEPITTEIVSLQAGGQF 282
GT V+ G + +G +KVG+E+EI P + T + ++ +
Sbjct: 221 RGT--------VVTGRVERGVVKVGEEVEIVGIRPTSK----------TTVTGVEMFRKL 262
Query: 283 VEEAYPGGLVGVGTKLDPYLTKGDLMAGNVVGKPGKLPPVWDSLRLEVHLLERVVG 338
+++ G +G L + + + G V+ KPG + P + E ++L + G
Sbjct: 263 LDQGQAGDNIGA---LLRGIDREGVERGQVLAKPGSVTP-HTKFKAEAYILTKEEG 314
>pir||A49894 translation elongation factor Tu - Chlamydia trachomatis
>gi|431279|gb|AAA19798.1| (L22216) elongation factor Tu
[Chlamydia trachomatis]
Length = 394
Score = 121 bits (300), Expect = 2e-26
Identities = 128/442 (28%), Positives = 196/442 (43%), Gaps = 87/442 (19%)
Query: 3 EKRKSRQAEVNIGMVGHVDHGKTTLTKALTGVWT-------------DTHSEELRRGITI 49
E + + +NIG +GHVDHGKTTLT A+T + D EE RGITI
Sbjct: 4 ETFQRNKPHINIGTIGHVDHGKTTLTAAITRALSGDGLADFRDYSSIDNTPEEKARGITI 63
Query: 50 KIGFADAEIRRCPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMD 109
+ E R + +D PGH + M+ GA+ MD
Sbjct: 64 NASHVEYETAN-----------------------RHYAHVDCPGHADYVKNMITGAAQMD 100
Query: 110 GAILVIAANEPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKA-----LENYRQIK 164
GAILV++A + PQT+EH++ + +G I++ NKI+++ +E A +E ++
Sbjct: 101 GAILVVSATDGA-MPQTKEHILLARQVGVPYIVVFLNKIDMISEEDAELVDLVE--MELA 157
Query: 165 EFIEGTVAENAPIIPISALHGANIDV--------LVKAIEDFIPTPKRDPNKPPKMLVLR 216
E +E + PII SAL D L++A++D IPTP+R+ +KP M +
Sbjct: 158 ELLEEKGYKGCPIIRGSALKALEGDAAYIEKVRELMQAVDDNIPTPEREIDKPFLMPIED 217
Query: 217 SFDVNKPGTPPEKLVGGVLGGSIVQGKLKVGDEIEIRPGVPYEEHGRIKYEPITTEIVSL 276
F ++ GT V+ G I +G +KV D++++ G+ R E I T
Sbjct: 218 VFSISGRGT--------VVTGRIERGIVKVSDKVQL-VGL------RDTKETIVT----- 257
Query: 277 QAGGQFVEEAYPGGLVG--VGTKLDPYLTKGDLMAGNVVGKPGKLPPVWDSLRLEVHLLE 334
G + + P G G VG L + K D+ G VV P + P + V++L+
Sbjct: 258 --GVEMFRKELPEGRAGENVGLLLRG-IGKNDVERGMVVCLPNSVKP-HTQFKCAVYVLQ 313
Query: 335 RVVGTEQE-----LKVEPIKRKEVLLLNVGTARTMGLVTGLGKDEIEVKLQIPVCAEPGD 389
+ G + + + R + V + +V E EV+L PV E G
Sbjct: 314 KEEGGRHKPFFTGYRPQFFFRTTDVTGVVTLPEGVEMVMPGDNVEFEVQLISPVALEEGM 373
Query: 390 RVAISRQIGSRWRLIGYGIIKE 411
R AI R+ G R IG G I +
Sbjct: 374 RFAI-REGG---RTIGAGTISK 391
>pir||S36184 translation elongation factor EF-Tu.B precursor, chloroplast - wood
tobacco
Length = 485
Score = 121 bits (300), Expect = 2e-26
Identities = 127/456 (27%), Positives = 198/456 (42%), Gaps = 102/456 (22%)
Query: 4 KRKSRQAEVNIGMVGHVDHGKTTLTKALTGVWT-------------DTHSEELRRGITIK 50
K + ++ VNIG +GHVDHGKTTLT ALT D EE RGITI
Sbjct: 81 KFERKKPHVNIGTIGHVDHGKTTLTAALTMALASMGNSAPKKYDEIDAAPEERARGITIN 140
Query: 51 IGFADAEIRRCPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMDG 110
+ +ETE R + +D PGH + M+ GA+ MDG
Sbjct: 141 TATVE----------------------YETE-NRHYAHVDCPGHADYVKNMITGAAQMDG 177
Query: 111 AILVIAANEPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALENYR-QIKEFIEG 169
AILV++ + P PQT+EH++ + +G N+++ NK + VD E+ LE +++E +
Sbjct: 178 AILVVSGADG-PMPQTKEHILLAKQVGVPNMVVFLNKQDQVDDEELLELVELEVRELLSS 236
Query: 170 --TVAENAPIIPISAL-------------HGAN-----IDVLVKAIEDFIPTPKRDPNKP 209
+ PII SAL G N I L+ ++++IP P+R P
Sbjct: 237 YEFPGDEIPIISGSALLALEALMANPSIKRGENQWVDKIYQLMDNVDEYIPIPQRQTELP 296
Query: 210 PKMLVLRSFDVNKPGTPPEKLVGGVLGGSIVQGKLKVGDEIEIRPGVPYEEHGRIKYEPI 269
M + F + GT V G + +G +KVG+ ++I G+ +
Sbjct: 297 FLMAIEDVFSITGRGT--------VATGRVERGTVKVGEIVDI-VGLK---------DTR 338
Query: 270 TTEIVSLQAGGQFVEEAYPGGLVGVGTKLDPYLTKGDLMAGNVVGKPGKLPPVWDSLRLE 329
T + ++ + ++EA G VG+ L + K D+ G V+ KPG + P +
Sbjct: 339 NTTVTGVEMFQKILDEAMAGDNVGL---LLRGIQKIDIQRGMVLAKPGTITP-----HTK 390
Query: 330 VHLLERVVGTEQELKVEPIKRKEVLLLNVGTARTMGLVTGLGKDEIE------------- 376
L V+ E+ + P + T G VT + D+ E
Sbjct: 391 FEALVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGKVTVMSTDKGEESKMVMPGDRVML 450
Query: 377 -VKLQIPVCAEPGDRVAISRQIGSRWRLIGYGIIKE 411
V+L +PV E G R AI R+ G + +G G+I++
Sbjct: 451 VVELIMPVACEQGMRFAI-REGG---KTVGAGVIQK 482
>sp|P26622|EFTU_CHLTR ELONGATION FACTOR TU (EF-TU) >gi|7443382|pir||G71528 probable
translation elongation factor EF-Tu - Chlamydia
trachomatis (serotype D, strain UW3/Cx)
>gi|3328740|gb|AAC67915.1| (AE001305) Elongation Factor
Tu [Chlamydia trachomatis]
Length = 394
Score = 121 bits (300), Expect = 2e-26
Identities = 128/443 (28%), Positives = 194/443 (42%), Gaps = 89/443 (20%)
Query: 3 EKRKSRQAEVNIGMVGHVDHGKTTLTKALTGVWT-------------DTHSEELRRGITI 49
E + + +NIG +GHVDHGKTTLT A+T + D EE RGITI
Sbjct: 4 ETFQRNKPHINIGTIGHVDHGKTTLTAAITRALSGDGLADFRDYSSIDNTPEEKARGITI 63
Query: 50 KIGFADAEIRRCPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMD 109
+ E R + +D PGH + M+ GA+ MD
Sbjct: 64 NASHVEYETAN-----------------------RHYAHVDCPGHADYVKNMITGAAQMD 100
Query: 110 GAILVIAANEPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKA-----LENYRQIK 164
GAILV++A + PQT+EH++ + +G I++ NKI+++ +E A +E ++
Sbjct: 101 GAILVVSATDGA-MPQTKEHILLARQVGVPYIVVFLNKIDMISEEDAELVDLVE--MELV 157
Query: 165 EFIEGTVAENAPIIPISALHGANIDV--------LVKAIEDFIPTPKRDPNKPPKMLVLR 216
E +E + PII SAL D L++A++D IPTP+R+ +KP M +
Sbjct: 158 ELLEEKGYKGCPIIRGSALKALEGDAAYIEKVRELMQAVDDNIPTPEREIDKPFLMPIED 217
Query: 217 SFDVNKPGTPPEKLVGGVLGGSIVQGKLKVGDEIEIRPGVPYEEHGRIKYEPITTEIVSL 276
F ++ GT V+ G I +G +KV D++++ G+ R E I T
Sbjct: 218 VFSISGRGT--------VVTGRIERGIVKVSDKVQL-VGL------RDTKETIVT----- 257
Query: 277 QAGGQFVEEAYPGGLVG--VGTKLDPYLTKGDLMAGNVVGKPGKLPPVWDSLRLEVHLLE 334
G + + P G G VG L + K D+ G VV P + P + V++L+
Sbjct: 258 --GVEMFRKELPEGRAGENVGLLLRG-IGKNDVERGMVVCLPNSVKP-HTQFKCAVYVLQ 313
Query: 335 RVVGTEQELKVEPIKRKEVLLLNVGTARTMGLVTGL------GKDEIEVKLQIPVCAEPG 388
+ G + R + + L G+ E EV+L PV E G
Sbjct: 314 KEEGGRHKPFFTGY-RPQFFFRTTDVTGVVTLPEGIEMVMPGDNVEFEVQLISPVALEEG 372
Query: 389 DRVAISRQIGSRWRLIGYGIIKE 411
R AI R+ G R IG G I +
Sbjct: 373 MRFAI-REGG---RTIGAGTISK 391
>gb|AAB87734.1| (U78300) elongation factor Tu [Thiomonas cuprina]
Length = 396
Score = 120 bits (299), Expect = 2e-26
Identities = 107/364 (29%), Positives = 165/364 (44%), Gaps = 78/364 (21%)
Query: 4 KRKSRQAEVNIGMVGHVDHGKTTLTKALTGVWT-------------DTHSEELRRGITIK 50
K + + VN+G +GHVDHGKTTLT A+T V + D EE RGITI
Sbjct: 5 KFERTKPHVNVGTIGHVDHGKTTLTAAITTVLSSKFGGEAKAYDQIDAAPEEKARGITIN 64
Query: 51 IGFADAEIRRCPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMDG 110
+ E R + +D PGH + M+ GA+ MDG
Sbjct: 65 TAHVEYETAN-----------------------RHYAHVDCPGHADYVKNMITGAAQMDG 101
Query: 111 AILVIAANEPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALENYR-QIKEFIE- 168
AILV++A + P PQTREH++ + +G II+ NK ++VD + LE +++E +
Sbjct: 102 AILVVSAGDG-PMPQTREHILLARQVGVPYIIVFLNKCDMVDDAELLELVEMEVRELLSK 160
Query: 169 -GTVAENAPIIPISA----------LHGANIDVLVKAIEDFIPTPKRDPNKPPKMLVLRS 217
++ PII SA L I L +A++ +IPTP+R + M V
Sbjct: 161 YDFPGDDTPIIKGSAKLALEGDKGELGEGAILKLAEALDTYIPTPERAVDGAFLMPVEDV 220
Query: 218 FDVNKPGTPPEKLVGGVLGGSIVQGKLKVGDEIEIRPGVPYEEHGRIKYEPITTEIVSLQ 277
F ++ GT V+ G + +G +KVG+EIEI P + T ++
Sbjct: 221 FSISGRGT--------VVTGRVERGIIKVGEEIEIVGLKP----------TLKTTCTGVE 262
Query: 278 AGGQFVEEAYPGGLVGV---GTKLDPYLTKGDLMAGNVVGKPGKLPPVWDSLRLEVHLLE 334
+ +++ G VG+ GTK + ++ G V+ KPG + P EV++L
Sbjct: 263 MFRKLLDQGQAGDNVGILLRGTK------REEVERGQVLCKPGSIKP-HTHFTAEVYVLS 315
Query: 335 RVVG 338
+ G
Sbjct: 316 KDEG 319
>sp|P75022|EFTU_AGRTU ELONGATION FACTOR TU (EF-TU) >gi|1666548|emb|CAA67991.1| (X99673)
elongation factor EF-Tu [Agrobacterium tumefaciens]
>gi|1666550|emb|CAA67992.1| (X99674) elongation factor
EF-Tu [Agrobacterium tumefaciens]
Length = 391
Score = 120 bits (298), Expect = 3e-26
Identities = 117/432 (27%), Positives = 191/432 (44%), Gaps = 76/432 (17%)
Query: 4 KRKSRQAEVNIGMVGHVDHGKTTLTKALTGVW--------TDTHSEELRRGITIKIGFAD 55
K + + VNIG +GHVDHGKT+LT A+T + D EE RGITI +
Sbjct: 5 KFERNKPHVNIGTIGHVDHGKTSLTAAITKYFGEFKAYDQIDAAPEEKARGITISTAHVE 64
Query: 56 AEIRRCPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMDGAILVI 115
E R + +D PGH + M+ GA+ MDGAILV
Sbjct: 65 YETP-----------------------ARHYAHVDCPGHADYVKNMITGAAEMDGAILVC 101
Query: 116 AANEPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALENYR-QIKEFIEG--TVA 172
+A + P PQTREH++ + +G I++ NK++ VD + LE +++E +
Sbjct: 102 SAADG-PMPQTREHILLARQVGVPAIVVFLNKVDQVDDAELLELVELEVRELLSSYDFPG 160
Query: 173 ENAPIIPISALHGAN----------IDVLVKAIEDFIPTPKRDPNKPPKMLVLRSFDVNK 222
++ PII SAL I L+ A++ +IPTP+R ++P M + F ++
Sbjct: 161 DDIPIIKGSALAALEDSDKKIGEDAIRELMAAVDAYIPTPERPIDQPFLMPIEDVFSISG 220
Query: 223 PGTPPEKLVGGVLGGSIVQGKLKVGDEIEIRPGVPYEEHGRIKYEPITTEIVSLQAGGQF 282
GT V+ G + +G +KVG+E+EI P + T + ++ +
Sbjct: 221 RGT--------VVTGRVERGIVKVGEEVEIVGIRPTSK----------TTVTGVEMFRKL 262
Query: 283 VEEAYPGGLVGVGTKLDPYLTKGDLMAGNVVGKPGKLPPVWDSLRLEVHLLERVVGTEQ- 341
+++ G +G L +T+ + G ++ KPG + P E ++L + G
Sbjct: 263 LDQGQAGDNIGA---LVRGVTRDGVERGQILCKPGSVKP-HKKFMAEAYILTKEEGGRHT 318
Query: 342 ----ELKVEPIKRKEVLLLNVGTARTMGLVTGLGKDEIEVKLQIPVCAEPGDRVAISRQI 397
+ + R + V +V +EV+L +P+ E R AI R+
Sbjct: 319 PFFTNYRPQFYFRTTDVTGIVSLPEGTEMVMPGDNVTVEVELIVPIAMEEKLRFAI-REG 377
Query: 398 GSRWRLIGYGII 409
G R +G GI+
Sbjct: 378 G---RTVGAGIV 386
>dbj|BAA01975.1| (D11376) chloroplast elongation factor TuB (EF-TuB) [Nicotiana
sylvestris]
Length = 425
Score = 120 bits (298), Expect = 3e-26
Identities = 127/456 (27%), Positives = 198/456 (42%), Gaps = 102/456 (22%)
Query: 4 KRKSRQAEVNIGMVGHVDHGKTTLTKALTGVWT-------------DTHSEELRRGITIK 50
K + ++ VNIG +GHVDHGKTTLT ALT D EE RGITI
Sbjct: 21 KFERKKPHVNIGTIGHVDHGKTTLTAALTMALASMGNSAPKKYDEIDAAPEERARGITIN 80
Query: 51 IGFADAEIRRCPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMDG 110
+ +ETE R + +D PGH + M+ GA+ MDG
Sbjct: 81 TATVE----------------------YETE-NRHYAHVDCPGHADYVKNMITGAAQMDG 117
Query: 111 AILVIAANEPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALENYR-QIKEFIEG 169
AILV++ + P PQT+EH++ + +G N+++ NK + VD E+ LE +++E +
Sbjct: 118 AILVVSGADG-PMPQTKEHILLAKQVGVPNMVVFLNKQDQVDDEELLELVELEVRELLSS 176
Query: 170 --TVAENAPIIPISAL-------------HGAN-----IDVLVKAIEDFIPTPKRDPNKP 209
+ PII SAL G N I L+ ++++IP P+R P
Sbjct: 177 YEFPGDEIPIISGSALLALEALMANPSIKRGENQWVDKIYQLMDNVDEYIPIPQRQTELP 236
Query: 210 PKMLVLRSFDVNKPGTPPEKLVGGVLGGSIVQGKLKVGDEIEIRPGVPYEEHGRIKYEPI 269
M + F + GT V G + +G +KVG+ ++I G+ +
Sbjct: 237 FLMAIEDVFSITGRGT--------VATGRVERGTVKVGEIVDI-VGLK---------DTR 278
Query: 270 TTEIVSLQAGGQFVEEAYPGGLVGVGTKLDPYLTKGDLMAGNVVGKPGKLPPVWDSLRLE 329
T + ++ + ++EA G VG+ L + K D+ G V+ KPG + P +
Sbjct: 279 NTTVTGVEMFQKILDEAMAGDNVGL---LLRGIQKIDIQRGMVLAKPGTITP-----HTK 330
Query: 330 VHLLERVVGTEQELKVEPIKRKEVLLLNVGTARTMGLVTGLGKDEIE------------- 376
L V+ E+ + P + T G VT + D+ E
Sbjct: 331 FEALVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGKVTVIMSDKGEESKMVMPGDRVNM 390
Query: 377 -VKLQIPVCAEPGDRVAISRQIGSRWRLIGYGIIKE 411
V+L +PV E G R AI R+ G + +G G+I++
Sbjct: 391 VVELIMPVACEQGMRFAI-REGG---KTVGAGVIQK 422
>dbj|BAA02028.1| (D11470) chloroplast elongation factor TuB(EF-TuB) [Nicotiana
sylvestris]
Length = 485
Score = 120 bits (298), Expect = 3e-26
Identities = 127/456 (27%), Positives = 198/456 (42%), Gaps = 102/456 (22%)
Query: 4 KRKSRQAEVNIGMVGHVDHGKTTLTKALTGVWT-------------DTHSEELRRGITIK 50
K + ++ VNIG +GHVDHGKTTLT ALT D EE RGITI
Sbjct: 81 KFERKKPHVNIGTIGHVDHGKTTLTAALTMALASMGNSAPKKYDEIDAAPEERARGITIN 140
Query: 51 IGFADAEIRRCPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMDG 110
+ +ETE R + +D PGH + M+ GA+ MDG
Sbjct: 141 TATVE----------------------YETE-NRHYAHVDCPGHADYVKNMITGAAQMDG 177
Query: 111 AILVIAANEPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALENYR-QIKEFIEG 169
AILV++ + P PQT+EH++ + +G N+++ NK + VD E+ LE +++E +
Sbjct: 178 AILVVSGADG-PMPQTKEHILLAKQVGVPNMVVFLNKQDQVDDEELLELVELEVRELLSS 236
Query: 170 --TVAENAPIIPISAL-------------HGAN-----IDVLVKAIEDFIPTPKRDPNKP 209
+ PII SAL G N I L+ ++++IP P+R P
Sbjct: 237 YEFPGDEIPIISGSALLALEALMANPSIKRGENQWVDKIYQLMDNVDEYIPIPQRQTELP 296
Query: 210 PKMLVLRSFDVNKPGTPPEKLVGGVLGGSIVQGKLKVGDEIEIRPGVPYEEHGRIKYEPI 269
M + F + GT V G + +G +KVG+ ++I G+ +
Sbjct: 297 FLMAIEDVFSITGRGT--------VATGRVERGTVKVGEIVDI-VGLK---------DTR 338
Query: 270 TTEIVSLQAGGQFVEEAYPGGLVGVGTKLDPYLTKGDLMAGNVVGKPGKLPPVWDSLRLE 329
T + ++ + ++EA G VG+ L + K D+ G V+ KPG + P +
Sbjct: 339 NTTVTGVEMFQKILDEAMAGDNVGL---LLRGIQKIDIQRGMVLAKPGTITP-----HTK 390
Query: 330 VHLLERVVGTEQELKVEPIKRKEVLLLNVGTARTMGLVTGLGKDEIE------------- 376
L V+ E+ + P + T G VT + D+ E
Sbjct: 391 FEALVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGKVTVIMSDKGEESKMVMPGDRVNM 450
Query: 377 -VKLQIPVCAEPGDRVAISRQIGSRWRLIGYGIIKE 411
V+L +PV E G R AI R+ G + +G G+I++
Sbjct: 451 VVELIMPVACEQGMRFAI-REGG---KTVGAGVIQK 482
>sp|Q43467|EFT1_SOYBN ELONGATION FACTOR TU, CHLOROPLAST PRECURSOR (EF-TU)
>gi|99903|pir||S21567 translation elongation factor
EF-Tu precursor - soybean chloroplast
>gi|18776|emb|CAA46864.1| (X66062) EF-Tu [Glycine max]
>gi|448921|prf||1918220A elongation factor Tu [Glycine
max]
Length = 479
Score = 120 bits (297), Expect = 4e-26
Identities = 120/452 (26%), Positives = 203/452 (44%), Gaps = 96/452 (21%)
Query: 4 KRKSRQAEVNIGMVGHVDHGKTTLTKALTGVWT-------------DTHSEELRRGITIK 50
K + ++ VNIG +GHVDHGKTTLT ALT D EE RGITI
Sbjct: 75 KFERKKPHVNIGTIGHVDHGKTTLTAALTMALAALGNSAPKKYDEIDAAPEERARGITIN 134
Query: 51 IGFADAEIRRCPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMDG 110
+ +ETE R + +D PGH + M+ GA+ MDG
Sbjct: 135 TATVE----------------------YETE-NRHYAHVDCPGHADYVKNMITGAAQMDG 171
Query: 111 AILVIAANEPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALENYR-QIKEFIEG 169
AILV++ + P PQT+EH++ + +G N+++ NK + VD E+ L+ ++++ +
Sbjct: 172 AILVVSGADG-PMPQTKEHIILAKQVGVPNMVVFLNKQDQVDDEELLQLVEIEVRDLLSS 230
Query: 170 --TVAENAPIIPISAL-------------HGAN-----IDVLVKAIEDFIPTPKRDPNKP 209
++ PI+ SAL G N I L+ ++++IP P+R + P
Sbjct: 231 YEFPGDDTPIVSGSALLALEALMANPAIKRGDNEWVDKIFQLMDEVDNYIPIPQRQTDLP 290
Query: 210 PKMLVLRSFDVNKPGTPPEKLVGGVLGGSIVQGKLKVGDEIEIRPGVPYEEHGRIKYEPI 269
+ V F + GT V G + +G +KVG+ +++ G+ E
Sbjct: 291 FLLAVEDVFSITGRGT--------VATGRVERGTIKVGETVDL-VGL---------RETR 332
Query: 270 TTEIVSLQAGGQFVEEAYPGGLVGVGTKLDPYLTKGDLMAGNVVGKPGKLPPVWDSLRLE 329
T + ++ + ++EA G VG+ L + K D+ G V+ KPG + P
Sbjct: 333 NTTVTGVEMFQKILDEALAGDNVGL---LLRGVQKTDIQRGMVLAKPGTITP-HTKFSAI 388
Query: 330 VHLLERVVGTEQE-----------LKVEPIKRKEVLLLNVGTARTMGLVTGLGKDEIEVK 378
V++L++ G ++ + K ++N + ++ G + ++ V+
Sbjct: 389 VYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGKVTSIMNDKDEESTMVLPG-DRVKMVVE 447
Query: 379 LQIPVCAEPGDRVAISRQIGSRWRLIGYGIIK 410
L +PV E G R AI R+ G + +G G+I+
Sbjct: 448 LIVPVACEQGMRFAI-REGG---KTVGAGVIQ 475
>sp|O24310|EFTU_PEA ELONGATION FACTOR TU, CHLOROPLAST PRECURSOR (EF-TU)
>gi|7443414|pir||T06821 translation elongation factor
EF-Tu precursor, chloroplast - garden pea
>gi|2330655|emb|CAA74893.1| (Y14561) choloroplast
translation elongation factor [Pisum sativum]
Length = 488
Score = 120 bits (297), Expect = 4e-26
Identities = 121/451 (26%), Positives = 200/451 (43%), Gaps = 96/451 (21%)
Query: 4 KRKSRQAEVNIGMVGHVDHGKTTLTKALTGVWT-------------DTHSEELRRGITIK 50
K + ++ +NIG +GHVDHGKTTLT ALT D EE RGITI
Sbjct: 84 KFERKKPHLNIGTIGHVDHGKTTLTAALTMALACLGNSAPKKYDEIDAAPEERARGITIN 143
Query: 51 IGFADAEIRRCPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMDG 110
+ +ETE R + +D PGH + M+ GA+ MDG
Sbjct: 144 TATVE----------------------YETE-TRHYAHVDCPGHADYVKNMITGAAQMDG 180
Query: 111 AILVIAANEPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALENYR-QIKEFIEG 169
AILV++ + P PQT+EH++ + +G ++++ NK + VD E+ LE +++E +
Sbjct: 181 AILVVSGADG-PMPQTKEHILLAKQVGVPSVVVFLNKQDQVDDEELLELVELEVRELLSS 239
Query: 170 --TVAENAPIIPISAL-------------HGAN-----IDVLVKAIEDFIPTPKRDPNKP 209
++ PI+ SAL G N I L+ ++ +IP P+R P
Sbjct: 240 YEFPGDDIPIVSGSALLALEALMANPTLKRGNNQWVDKIYQLMDEVDKYIPIPQRQTELP 299
Query: 210 PKMLVLRSFDVNKPGTPPEKLVGGVLGGSIVQGKLKVGDEIEIRPGVPYEEHGRIKYEPI 269
+ + F + GT V G I +G +KVGD +++ G+ E
Sbjct: 300 FLLAIEDVFSITXRGT--------VATGRIERGLVKVGDVVDL-VGL---------RETR 341
Query: 270 TTEIVSLQAGGQFVEEAYPGGLVGVGTKLDPYLTKGDLMAGNVVGKPGKLPPVWDSLRLE 329
T + ++ + +++A G VG+ L + K D+ G V+ KPG + P
Sbjct: 342 NTTVTGVEMFQKILDDAMAGDNVGL---LLRGIQKIDIQRGMVLAKPGTITP-HSKFSAI 397
Query: 330 VHLLERVVGTEQE-----------LKVEPIKRKEVLLLNVGTARTMGLVTGLGKDEIEVK 378
V++L++ G ++ + K ++N + ++ G + +I V+
Sbjct: 398 VYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGKVTSIMNDKDEESKMVMPG-DRVKIVVE 456
Query: 379 LQIPVCAEPGDRVAISRQIGSRWRLIGYGII 409
L +PV E G R AI R+ G + +G G+I
Sbjct: 457 LIVPVAIEQGMRFAI-REGG---KTVGAGVI 483
>gb|AAG35793.1|AF295387_1 (AF295387) translational elongation factor-Tu [Pirellula marina]
Length = 380
Score = 120 bits (297), Expect = 4e-26
Identities = 110/409 (26%), Positives = 186/409 (44%), Gaps = 51/409 (12%)
Query: 18 GHVDHGKTTLTKALTGVWTDTHSEELRRGITIKIGFADAEIRRCPNCGRYSTSPVCPYCG 77
GHVDHGKTT T A+ V + +G+ +++ + + +
Sbjct: 1 GHVDHGKTTTTGAILAV-------QAAKGLAKNKAYSEIAKGGTVRDATKTVTIAVAHVE 53
Query: 78 HETEFVRRVSFIDAPGHEALMTTMLAGASLMDGAILVIAANEPCPRPQTREHLMALQIIG 137
+ET R + ID PGH + M+ GA+ MDGAILV++A + P PQT+EH++ + +G
Sbjct: 54 YETPN-RHYAHIDCPGHADFVKNMITGAAQMDGAILVVSAADG-PMPQTKEHVLLARQVG 111
Query: 138 QKNIIIAQNKIELVDKEKALENYR-QIKEFIE--GTVAENAPIIPISALHGAN------- 187
+ + NK +LVD E+ L+ +++E + ++ P+I ++L N
Sbjct: 112 VPYVCVFLNKCDLVDDEELLDLVELEVRELLSKYEFPGDDCPVIRGASLPAYNNPADPEA 171
Query: 188 ---IDVLVKAIEDFIPTPKRDPNKPPKMLVLRSFDVNKPGTPPEKLVGGVLGGSIVQGKL 244
I L++A++ +IP P R+ +KP M + F + GT V G I +G +
Sbjct: 172 SKCITELMEALDTYIPEPTREADKPFLMAIEDVFSIEGRGT--------VATGRIERGVV 223
Query: 245 KVGDEIEIRPGVPYEEHGRIKYEPITTEIVSLQAGGQFVEEAYPGGLVGVGTKLDPYLTK 304
KVG+E+ I + P T + ++ + ++E Y G VG L + +
Sbjct: 224 KVGEEVLII---------GLNDAPTKTTVTGIEMFNKILQEGYAGDNVGC---LLRGVKR 271
Query: 305 GDLMAGNVVGKPGKLPPVWDSLRLEVHLLERVVGTEQELKVEPIKRKEVLLLN--VGTAR 362
D+ G V+ KPG + P E++ L + G + + GTA
Sbjct: 272 EDISRGQVLAKPGTITP-HTKFEAEIYCLSKEEGGRHTPFFSGYRPQFYFRTTDVTGTAN 330
Query: 363 TMGLVTGLGKD--EIEVKLQIPVCAEPGDRVAISRQIGSRWRLIGYGII 409
+G + D IEV+L P+ + G R AI R+ G R +G G++
Sbjct: 331 LIGAEMCMPGDNVRIEVELHKPIAMDDGVRFAI-REGG---RTVGSGVV 375
>sp|P42472|EFTU_CHLAU ELONGATION FACTOR TU (EF-TU) >gi|2119919|pir||I40602 translation
elongation factor EF-Tu - Chloroflexus aurantiacus
(fragment) >gi|560808|emb|CAA54193.1| (X76864)
elongation factor Tu [Chloroflexus aurantiacus]
Length = 382
Score = 119 bits (296), Expect = 5e-26
Identities = 118/426 (27%), Positives = 192/426 (44%), Gaps = 84/426 (19%)
Query: 19 HVDHGKTTLTKALTGVWT-------------DTHSEELRRGITIKIGFADAEIRRCPNCG 65
HVDHGKTTLT A+T V + D EE RGITI I +
Sbjct: 1 HVDHGKTTLTAAITKVMSLKGAAQFMAYDQIDNAPEERARGITIAIRHVE---------- 50
Query: 66 RYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMDGAILVIAANEPCPRPQ 125
Y T R + +D PGH + M+ GA+ MDGAILV++A + P PQ
Sbjct: 51 -YQTDK------------RHYAHVDCPGHADYIKNMITGAAQMDGAILVVSAPDG-PMPQ 96
Query: 126 TREHLMALQIIGQKNIIIAQNKIELVDKEKALENYR-QIKEFIE--GTVAENAPII---P 179
TREH++ + + I++ NK++++D + LE +++E + G + PI+
Sbjct: 97 TREHILLARQVQVPAIVVFLNKVDMMDDPELLELVELELRELLSKYGFPGDEIPIVRGTA 156
Query: 180 ISALHGANIDV----------LVKAIEDFIPTPKRDPNKPPKMLVLRSFDVNKPGTPPEK 229
+AL + D+ L+ A++++IPTP+R ++P M + F + GT
Sbjct: 157 RNALESPSKDINAPEYKCILELMNAVDEYIPTPQRAVDQPFLMPIEDVFGIKGRGT---- 212
Query: 230 LVGGVLGGSIVQGKLKVGDEIEIRPGVPYEEHGRIKYEPITTEIVSLQAGGQFVEEAYPG 289
V+ G I +GK+KVGD +EI G P T + ++ + ++E G
Sbjct: 213 ----VVTGRIERGKVKVGDTVEI--------VGMTNDAPRRTVVTGVEMFQKTLDEGIAG 260
Query: 290 GLVGVGTKLDPYLTKGDLMAGNVVGKPGKLPPVWDSLRLEVHLLERVVGTEQELKVEPIK 349
VG L + + D+ G V+ PG + P +V++L++ G
Sbjct: 261 DNVGC---LLRGIERTDVERGQVLCAPGSIKP-HKKFEAQVYVLKKEEGGRHTPFFSGY- 315
Query: 350 RKEVLLLNVGTARTMGLVTGL-----GKDEI-EVKLQIPVCAEPGDRVAISRQIGSRWRL 403
R + + +GL G+ G + + ++L +PV E G R AI R+ G R
Sbjct: 316 RPQFYIRTTDVTGAIGLPAGMEMVMPGDNVVMTIELIVPVAIEEGLRFAI-REGG---RT 371
Query: 404 IGYGII 409
+G G++
Sbjct: 372 VGAGVV 377
>emb|CAA36740.1| (X52497) tufA gene product (AA 1-409) [Cyanophora paradoxa]
Length = 409
Score = 119 bits (295), Expect = 7e-26
Identities = 105/370 (28%), Positives = 164/370 (43%), Gaps = 80/370 (21%)
Query: 3 EKRKSRQAEVNIGMVGHVDHGKTTLTKALTGVWT-------------DTHSEELRRGITI 49
+K + VNIG +GHVDHGKTTLT A+T D EE RGITI
Sbjct: 4 QKFDGNKPHVNIGTIGHVDHGKTTLTAAITTALASQGKGKARKYDEIDAAPEEKARGITI 63
Query: 50 KIGFADAEIRRCPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMD 109
+ +ETE R + +D PGH + M+ GA+ MD
Sbjct: 64 NTAHVE----------------------YETE-KRHYAHVDCPGHADYVKNMITGAAQMD 100
Query: 110 GAILVIAANEPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALENYR-QIKEFIE 168
GAILV++A + P PQTREH++ + +G N+++ NK + +D LE +++E +
Sbjct: 101 GAILVVSAADG-PMPQTREHILLAKQVGVPNMVVFLNKEDQIDDADLLELVELEVRELLS 159
Query: 169 --GTVAENAPIIPISALHGA------------------NIDVLVKAIEDFIPTPKRDPNK 208
+ P + SAL I L+ A++++IPTP+R +K
Sbjct: 160 KYDFPGDQIPFVSGSALLALESLSSNPKLMRGEDKWVDKILALMDAVDEYIPTPERPIDK 219
Query: 209 PPKMLVLRSFDVNKPGTPPEKLVGGVLGGSIVQGKLKVGDEIEIRPGVPYEEHGRIKYEP 268
M + F + GT V G I +G +KVG+ +E+ G+ +
Sbjct: 220 SFLMAIEDVFSITGRGT--------VATGRIERGAIKVGETVEL-VGLK---------DT 261
Query: 269 ITTEIVSLQAGGQFVEEAYPGGLVGVGTKLDPYLTKGDLMAGNVVGKPGKLPPVWDSLRL 328
+T + L+ + +EE G +G+ L + K D+ G V+ KPG + P
Sbjct: 262 KSTTVTGLEMFQKTLEEGMAGDNIGI---LLRGVQKTDIERGMVLAKPGSITP-HTQFES 317
Query: 329 EVHLLERVVG 338
EV++L + G
Sbjct: 318 EVYVLTKDEG 327
>gi|11467350 protein synthesis elongation factor Tu [Cyanophora paradoxa]
>gi|1352353|sp|P17245|EFTU_CYAPA ELONGATION FACTOR TU
(EF-TU) >gi|7428962|pir||EFKTT translation elongation
factor EF-Tu - Cyanophora paradoxa cyanelle
>gi|1016151|gb|AAA81238.1| (U30821) protein synthesis
elongation factor Tu [Cyanophora paradoxa]
Length = 409
Score = 119 bits (295), Expect = 7e-26
Identities = 105/370 (28%), Positives = 164/370 (43%), Gaps = 80/370 (21%)
Query: 3 EKRKSRQAEVNIGMVGHVDHGKTTLTKALTGVWT-------------DTHSEELRRGITI 49
+K + VNIG +GHVDHGKTTLT A+T D EE RGITI
Sbjct: 4 QKFDGNKPHVNIGTIGHVDHGKTTLTAAITTALASQGKGKARKYDEIDAAPEEKARGITI 63
Query: 50 KIGFADAEIRRCPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMD 109
+ +ETE R + +D PGH + M+ GA+ MD
Sbjct: 64 NTAHVE----------------------YETE-KRHYAHVDCPGHADYVKNMITGAAQMD 100
Query: 110 GAILVIAANEPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALENYR-QIKEFIE 168
GAILV++A + P PQTREH++ + +G N+++ NK + +D LE +++E +
Sbjct: 101 GAILVVSAADG-PMPQTREHILLAKQVGVPNMVVFLNKEDQIDDADLLELVELEVRELLS 159
Query: 169 --GTVAENAPIIPISALHGA------------------NIDVLVKAIEDFIPTPKRDPNK 208
+ P + SAL I L+ A++++IPTP+R +K
Sbjct: 160 KYDFPGDQIPFVSGSALLALESLSSNPKLMRGEDKWVDKILALMDAVDEYIPTPERPIDK 219
Query: 209 PPKMLVLRSFDVNKPGTPPEKLVGGVLGGSIVQGKLKVGDEIEIRPGVPYEEHGRIKYEP 268
M + F + GT V G I +G +KVG+ +E+ G+ +
Sbjct: 220 SFLMAIEDVFSITGRGT--------VATGRIERGAIKVGETVEL-VGLK---------DT 261
Query: 269 ITTEIVSLQAGGQFVEEAYPGGLVGVGTKLDPYLTKGDLMAGNVVGKPGKLPPVWDSLRL 328
+T + L+ + +EE G +G+ L + K D+ G V+ KPG + P
Sbjct: 262 KSTTVTGLEMFQKTLEEGMAGDNIGI---LLRGVQKTDIERGMVLAKPGSITP-HTQFES 317
Query: 329 EVHLLERVVG 338
EV++L + G
Sbjct: 318 EVYVLTKDEG 327
>sp|Q9Z9A7|EFTU_CHLPN ELONGATION FACTOR TU (EF-TU) >gi|7443413|pir||F72123 translation
elongation factor Tu CP0701 [imported] - Chlamydophila
pneumoniae (strains CWL029 and AR39)
>gi|4376331|gb|AAD18227.1| (AE001592) Elongation Factor
Tu [Chlamydophila pneumoniae CWL029]
>gi|7189616|gb|AAF38509.1| (AE002229) translation
elongation factor Tu [Chlamydophila pneumoniae AR39]
>gi|8978447|dbj|BAA98284.1| (AP002545) elongation factor
Tu [Chlamydophila pneumoniae J138]
Length = 394
Score = 119 bits (295), Expect = 7e-26
Identities = 107/364 (29%), Positives = 169/364 (46%), Gaps = 78/364 (21%)
Query: 3 EKRKSRQAEVNIGMVGHVDHGKTTLTKALTGVWT-------------DTHSEELRRGITI 49
E + + +NIG +GHVDHGKTTLT A+T + D EE RGITI
Sbjct: 4 ETFQRNKPHINIGTIGHVDHGKTTLTAAITRALSGDGLASFRDYSSIDNTPEEKARGITI 63
Query: 50 KIGFADAEIRRCPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMD 109
+ E PN R + +D PGH + M+ GA+ MD
Sbjct: 64 NASHVEYE---TPN--------------------RHYAHVDCPGHADYVKNMITGAAQMD 100
Query: 110 GAILVIAANEPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKA-----LENYRQIK 164
GAILV++A + PQT+EH++ + +G I++ NK++++ +E A +E ++
Sbjct: 101 GAILVVSATDGA-MPQTKEHILLARQVGVPYIVVFLNKVDMISQEDAELIDLVE--MELS 157
Query: 165 EFIEGTVAENAPIIPISALHGANIDV--------LVKAIEDFIPTPKRDPNKPPKMLVLR 216
E +E + PII SAL D L++A++D IPTP+R+ +KP M +
Sbjct: 158 ELLEEKGYKGCPIIRGSALKALEGDANYIEKVRELMQAVDDNIPTPEREIDKPFLMPIED 217
Query: 217 SFDVNKPGTPPEKLVGGVLGGSIVQGKLKVGDEIEIRPGVPYEEHGRIKYEPITTEIVSL 276
F ++ GT V+ G I +G +KV D++++ G+ G K +T
Sbjct: 218 VFSISGRGT--------VVTGRIERGIVKVSDKVQL-VGL-----GETKETIVT------ 257
Query: 277 QAGGQFVEEAYPGGLVG--VGTKLDPYLTKGDLMAGNVVGKPGKLPPVWDSLRLEVHLLE 334
G + + P G G VG L + K D+ G VV +P + P + V++L+
Sbjct: 258 --GVEMFRKELPEGRAGENVGLLLRG-IGKNDVERGMVVCQPNSVKP-HTKFKSAVYVLQ 313
Query: 335 RVVG 338
+ G
Sbjct: 314 KEEG 317
>sp|P17197|EF1A_THECE ELONGATION FACTOR 1-ALPHA (EF-1-ALPHA) (ELONGATION FACTOR TU)
(EF-TU) >gi|99240|pir||S10248 translation elongation
factor aEF-1 alpha chain - Thermococcus celer
>gi|48133|emb|CAA36610.1| (X52383) elongation
factor-1-alpha (AA 1-428) [Thermococcus celer]
Length = 428
Score = 118 bits (294), Expect = 9e-26
Identities = 105/409 (25%), Positives = 172/409 (41%), Gaps = 102/409 (24%)
Query: 12 VNIGMVGHVDHGKTTLT-------------------------KALTGVWT-DTHSEELRR 45
+NI +GHVDHGK+T K+ W D EE R
Sbjct: 8 INIVFIGHVDHGKSTTIGRLLFDTANIPENIIKKFEEMGEKGKSFKFAWVMDRLKEERER 67
Query: 46 GITIKIGFADAEIRRCPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGA 105
GITI + E R ++ IDAPGH + M+ GA
Sbjct: 68 GITIDVAHTKFETPH-----------------------RYITIIDAPGHRDFVKNMITGA 104
Query: 106 SLMDGAILVIAANEPCPRPQTREHLMALQIIGQKNIIIAQNKIELV--DKEKALENYRQI 163
S D A+LV+A + PQT+EH + +G NI++A NK+++V D++K Q+
Sbjct: 105 SQADAAVLVVAVTDGV-MPQTKEHAFLARTLGINNILVAVNKMDMVNYDEKKFKAVAEQV 163
Query: 164 KEFIEGTVAENAPIIPISALHGANI------------DVLVKAIEDFIPTPKRDPNKPPK 211
K+ + +N PIIPISA G N+ L++A+ D +P P + +KP +
Sbjct: 164 KKLLMMLGYKNFPIIPISAWEGDNVVKKSDKMPWYNGPTLIEAL-DQMPEPPKPTDKPLR 222
Query: 212 MLVLRSFDVNKPGTPPEKLVGGVLGGSIVQGKLKVGDEIEIRPGVPYEEHGRIKYEPITT 271
+ + + + GT P G + G L+VGD + P I ++PI
Sbjct: 223 IPIQDVYSIKGVGTVPV--------GRVETGVLRVGDVVIFEPA------STIFHKPIQG 268
Query: 272 EIVSLQAGGQFVEEAYPGGLVGVGTKLDPYLTKGDLMAGNVVGKPGKLPPVWDSLRLEVH 331
E+ S++ + ++EA PG +G + + K D+ G+V G P V
Sbjct: 269 EVKSIEMHHEPMQEALPGDNIGFNVR---GVGKNDIKRGDVAGHTNNPPTV--------- 316
Query: 332 LLERVVGTEQELKVEPIKRKEVLLLNVGTARTMGLVTGLGKDEIEVKLQ 380
++ + + ++++LN TA T+G L ++V ++
Sbjct: 317 -----------VRPKDTFKAQIIVLNHPTAITVGYTPVLHAHTLQVAVR 354
>emb|CAB95778.1| (AL359949) elongation factor TU-3 [Streptomyces coelicolor A3(2)]
Length = 392
Score = 118 bits (293), Expect = 1e-25
Identities = 109/413 (26%), Positives = 184/413 (44%), Gaps = 88/413 (21%)
Query: 12 VNIGMVGHVDHGKTTLTKALTGVWT----------------DTHSEELRRGITIKIGFAD 55
+NIG +GHVDHGKTTLT A+T V D EE RGITI I +
Sbjct: 13 LNIGTMGHVDHGKTTLTAAITKVLAERGAGSTTQYVSFDRIDRAPEEAARGITINIAHVE 72
Query: 56 AEIRRCPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMDGAILVI 115
+ET+ R + +D PGH + M+ GA+ +DGAILV+
Sbjct: 73 ----------------------YETD-TRHYAHVDMPGHADYVKNMVTGAAQLDGAILVV 109
Query: 116 AANEPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALENYRQIKEFI--EGTVAE 173
+A + PQT EH++ + +G +I++A NK + D+E +++E + G +
Sbjct: 110 SALDGI-MPQTAEHVLLARQVGVDHIVVALNKADAGDEELTDLVELEVRELLTAHGYGGD 168
Query: 174 NAPIIPISALHG--------ANIDVLVKAIEDFIPTPKRDPNKPPKMLVLRSFDVNKPGT 225
P++ +S L A+++ L+ A++ ++P P+R + P + V + GT
Sbjct: 169 AVPVVRVSGLKALEGDPRWTASVEALLDAVDTYVPMPERYLDAPFLLPVENVLTITGRGT 228
Query: 226 PPEKLVGGVLGGSIVQGKLKVGDEIEIRPGVPYEEHGRIKYEPITTEIVSLQAGGQFVEE 285
V+ G++ +G ++VGD +E+ + T + L+ G+ +EE
Sbjct: 229 --------VVTGAVERGTVRVGDRVEVLGA------------SVETVVTGLETFGKPMEE 268
Query: 286 AYPGGLVGVGTKLDPYLTKGDLMAGNVVGKPGKLPPVWDSLRLEVHLLERVVGTEQELKV 345
A G V + L + + + G VV PG + P R V++L G +
Sbjct: 269 AQAGDNVAL---LLRGVARDTVRRGQVVAAPGSVVPA-RRFRARVYVLSAREGG----RS 320
Query: 346 EPIKRKEVLLLNVGTARTMGLVTGLGKDEIEVKLQIPVCAEPGDRVAISRQIG 398
P+ + TA +G V LG++ + A PGD V ++ ++G
Sbjct: 321 TPLTTGYRPQFYIRTADVVGDV-DLGEEAV---------ARPGDTVTMTVELG 363
>pir||B70389 translation elongation factor EF-selB - Aquifex aeolicus
>gi|2983523|gb|AAC07099.1| (AE000719) elongation factor
SelB [Aquifex aeolicus]
Length = 582
Score = 118 bits (292), Expect = 2e-25
Identities = 107/383 (27%), Positives = 172/383 (43%), Gaps = 62/383 (16%)
Query: 18 GHVDHGKTTLTKALTGVWTDTHSEELRRGITIKIGFADAEIRRCPNCGRYSTSPVCPYCG 77
GHVDHGKTTL K LTG+ TD EE +RG++I IGFA Y P
Sbjct: 10 GHVDHGKTTLIKTLTGIDTDRLPEEKKRGLSIDIGFA------------YIDFP------ 51
Query: 78 HETEFVRRVSFIDAPGHEALMTTMLAGASLMDGAILVIAANEPCPRPQTREHLMALQIIG 137
+ R+ ID PGHE + +AG G ILV+ NE PQT EHL + G
Sbjct: 52 ---DINTRLEIIDVPGHERFIKNAIAGICSASGLILVVDPNEGI-MPQTIEHLRVAKSFG 107
Query: 138 QKNIIIAQNKIELVDKEKALENYRQIKEFIEGTVAENAPIIPISALHGANIDVLVKAIED 197
K+ I K++ VD+E A ++ F+E N I+ +SA+ G I+ L +I+
Sbjct: 108 IKHGIAVLTKMDKVDEELAHIAEEELIAFLE-KEEMNMEIVKVSAVTGQGIEDLKNSIKK 166
Query: 198 FIPTPKR-DPNKPPKMLVLRSFDVNKPGTPPEKLVGGVLGGSIVQGKLKVGDEIEIRPGV 256
+ + + +KP ++ V +F V GT VL GS +G++K GD++ + P
Sbjct: 167 LLESINNLNKHKPLRIFVDSAFVVKGYGT--------VLRGSCFEGEVKEGDKVVVEP-- 216
Query: 257 PYEEHGRIKYEPITTEIVSLQAGGQFVEEAYPGGLVGVGTKLDPYLTKGDLMAGNVVGKP 316
+ + + +Q G FV++A G + + P + + G ++ KP
Sbjct: 217 ----------IGVISRVRKMQNHGVFVKKAVAGERIALNL---PEVDAKKVKRGFLILKP 263
Query: 317 GKLPPVWDSLRLEVHLLERVVGTEQELKVEPIKRKEVLLLNVGTARTMGLVTGLGKDEIE 376
E + V+ + E+ ++P K +V G T+G ++ + K
Sbjct: 264 ------------ESYEKSNVLIVKTEIDLKPGKIYQVFF---GMRETVGKISVIDKGIYL 308
Query: 377 VKLQIPVCAEPGDRVAISRQIGS 399
V+L+ GD++ + G+
Sbjct: 309 VRLKENAIVRRGDKLVVLDSSGN 331
>sp|P40175|EFT3_STRCO ELONGATION FACTOR TU-3 (EF-TU-3) >gi|1076070|pir||S50139
translation elongation factor EF-Tu.3 - Streptomyces
coelicolor >gi|442503|emb|CAA54330.1| (X77040) EF-Tu3
[Streptomyces coelicolor A3(2)]
>gi|1091583|prf||2021268B elongation factor
[Streptomyces coelicolor]
Length = 392
Score = 117 bits (291), Expect = 2e-25
Identities = 109/413 (26%), Positives = 183/413 (43%), Gaps = 88/413 (21%)
Query: 12 VNIGMVGHVDHGKTTLTKALTGVWT----------------DTHSEELRRGITIKIGFAD 55
+NIG +GHVDHGKTTLT A+T V D EE RGITI I +
Sbjct: 13 LNIGTMGHVDHGKTTLTAAITKVLAERGAGSTTQYVSFDRIDRAPEEAARGITINIAHVE 72
Query: 56 AEIRRCPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMDGAILVI 115
+ET+ R + +D PGH + M+ GA+ +DGAILV+
Sbjct: 73 ----------------------YETD-TRHYAHVDMPGHADYVKNMVTGAAQLDGAILVV 109
Query: 116 AANEPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALENYRQIKEFI--EGTVAE 173
+A + PQT EH++ + +G +I++A NK + D+E +++E + G +
Sbjct: 110 SALDGI-MPQTAEHVLLARQVGVDHIVVALNKADAGDEELTDLVELEVRELLTAHGYGGD 168
Query: 174 NAPIIPISALHG--------ANIDVLVKAIEDFIPTPKRDPNKPPKMLVLRSFDVNKPGT 225
P++ +S L A+++ L+ A++ ++P P+R + P + V + GT
Sbjct: 169 AVPVVRVSGLKALEGDPRWTASVEALLDAVDTYVPMPERYLDAPFLLPVENVLTITGRGT 228
Query: 226 PPEKLVGGVLGGSIVQGKLKVGDEIEIRPGVPYEEHGRIKYEPITTEIVSLQAGGQFVEE 285
V+ G++ G ++VGD +E+ + T + L+ G+ +EE
Sbjct: 229 --------VVTGAVEPGTVRVGDRVEVLGA------------SVETVVTGLETFGKPMEE 268
Query: 286 AYPGGLVGVGTKLDPYLTKGDLMAGNVVGKPGKLPPVWDSLRLEVHLLERVVGTEQELKV 345
A G V + L + + + G VV PG + P R V++L G +
Sbjct: 269 AQAGDNVAL---LLRGVARDTVRRGQVVAAPGSVVPA-RRFRARVYVLSAREGG----RS 320
Query: 346 EPIKRKEVLLLNVGTARTMGLVTGLGKDEIEVKLQIPVCAEPGDRVAISRQIG 398
P+ + TA +G V LG++ + A PGD V ++ ++G
Sbjct: 321 TPLTTGYRPQFYIRTADVVGDV-DLGEEAV---------ARPGDTVTMTVELG 363
>dbj|BAA01974.1| (D11375) chloroplast elongation factor TuA (EF-TuA) [Nicotiana
sylvestris]
Length = 457
Score = 116 bits (289), Expect = 3e-25
Identities = 116/422 (27%), Positives = 182/422 (42%), Gaps = 88/422 (20%)
Query: 4 KRKSRQAEVNIGMVGHVDHGKTTLTKALTGVWT-------------DTHSEELRRGITIK 50
K + ++ VNIG +GHVDHGKTTLT ALT D EE RGITI
Sbjct: 74 KFERKKPHVNIGTIGHVDHGKTTLTAALTMALASMGNSAPKKYDEIDAAPEERARGITIN 133
Query: 51 IGFADAEIRRCPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMDG 110
+ +ETE R + +D PGH + M+ GA+ MDG
Sbjct: 134 TATVE----------------------YETE-NRHYAHVDCPGHADYVKNMITGAAQMDG 170
Query: 111 AILVIAANEPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALENYR-QIKEFIEG 169
AILV + + P PQT+EH++ + +G N+++ NK + VD E+ L+ +++E +
Sbjct: 171 AILVCSGADG-PMPQTKEHILLAKQVGVPNMVVFLNKQDQVDDEELLQLVELEVRELLSS 229
Query: 170 --TVAENAPIIPISAL-------------HGAN-----IDVLVKAIEDFIPTPKRDPNKP 209
++ PII SAL G N I L+ A++ +IP P R P
Sbjct: 230 YEFPGDDIPIISGSALLALEALMANPSIKRGENQWVDKIYELMDAVDSYIPIPVRQTELP 289
Query: 210 PKMLVLRSFDVNKPGTPPEKLVGGVLGGSIVQGKLKVGDEIEIRPGVPYEEHGRIKYEPI 269
M + F + GT V G + +G +++GD ++I G+ +
Sbjct: 290 FLMAIEDVFSITGRGT--------VATGRVERGTVRIGDTVDI-VGLK---------DTR 331
Query: 270 TTEIVSLQAGGQFVEEAYPGGLVGVGTKLDPYLTKGDLMAGNVVGKPGKLPPVWDSLRLE 329
+T + ++ + ++EA G VG+ L + K D+ G V+ KPG + P +
Sbjct: 332 STTVTGVEMFQKILDEAMAGDNVGL---LLRGIQKIDIQRGMVLAKPGTITP-----HTK 383
Query: 330 VHLLERVVGTEQELKVEPIKRKEVLLLNVGTARTMGLVTGLGKDEIEVKLQIPVCAEPGD 389
+ V+ E+ + P + T G VT + D+ E + PGD
Sbjct: 384 FEAIVYVLKKEEGGRHSPFFSGYRPQFYMRTTDVTGKVTSITTDKGEESKMV----MPGD 439
Query: 390 RV 391
RV
Sbjct: 440 RV 441
>sp|P50372|EFTU_CODFR ELONGATION FACTOR TU (EF-TU) >gi|836830|gb|AAA87687.1| (U09427)
protein synthesis elongation factor Tu [Codium fragile]
Length = 410
Score = 116 bits (287), Expect = 6e-25
Identities = 103/369 (27%), Positives = 166/369 (44%), Gaps = 79/369 (21%)
Query: 3 EKRKSRQAEVNIGMVGHVDHGKTTLTKALTGVWT-------------DTHSEELRRGITI 49
EK + + +NIG +GHVDHGKTTLT A+T D+ EE RGITI
Sbjct: 4 EKFERIKPHLNIGTIGHVDHGKTTLTAAITMALAVKGYTKAKNYMDIDSAPEEKARGITI 63
Query: 50 KIGFADAEIRRCPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMD 109
+ +ET+ VR + +D PGH + M+ GA+ MD
Sbjct: 64 NTAHVE----------------------YETD-VRHYAHVDCPGHADYVKNMITGAAQMD 100
Query: 110 GAILVIAANEPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALENYR-QIKEFIE 168
GAILV++ + P PQT+EH++ + +G I++ NK + VD ++ LE +I+E +
Sbjct: 101 GAILVVSGADG-PMPQTKEHILLAKQVGVPAIVVFLNKADQVDDDELLELVELEIQETLT 159
Query: 169 --GTVAENAPIIPISALHG-----------------ANIDVLVKAIEDFIPTPKRDPNKP 209
E PII SA+ I L++ ++++IPTPKRD KP
Sbjct: 160 TYEYPGEEIPIITGSAITALESLTAKYVLRIGNKWVQKIYDLMETVDEYIPTPKRDTEKP 219
Query: 210 PKMLVLRSFDVNKPGTPPEKLVGGVLGGSIVQGKLKVGDEIEIRPGVPYEEHGRIKYEPI 269
M + + GT V G + +G ++VG +E+ +E
Sbjct: 220 FLMAIENVVSITGRGT--------VATGRVERGMIEVGQTVELVGLKNTKE--------- 262
Query: 270 TTEIVSLQAGGQFVEEAYPGGLVGVGTKLDPYLTKGDLMAGNVVGKPGKLPPVWDSLRLE 329
I L+ + +E++ G VG+ L + K ++ G V+ KP + P + +
Sbjct: 263 -AIITGLEMFHKTLEKSVAGDNVGI---LLRRIQKEEIQRGMVLAKPSSILP-HQHFKAQ 317
Query: 330 VHLLERVVG 338
V++L++ G
Sbjct: 318 VYILKKEEG 326
>gb|AAA62238.1| (M74221) elongation factor Tu [Chlamydia trachomatis]
Length = 394
Score = 115 bits (285), Expect = 1e-24
Identities = 123/443 (27%), Positives = 192/443 (42%), Gaps = 89/443 (20%)
Query: 3 EKRKSRQAEVNIGMVGHVDHGKTTLTKALTGVWT-------------DTHSEELRRGITI 49
E + + +NIG +GHVDHG+TTLT A+T + D EE RGI I
Sbjct: 4 ETFQRNKPHINIGAIGHVDHGRTTLTAAITRTLSGDGLADFRDYSSIDNTPEEKARGIPI 63
Query: 50 KIGFADAEIRRCPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMD 109
+ E R + +D P H + M+ GA+ MD
Sbjct: 64 NASHVEYETAN-----------------------RHYAHVDCPCHADYVKNMITGAAQMD 100
Query: 110 GAILVIAANEPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKA-----LENYRQIK 164
GAILV++A + PQT+EH++ + +G I++ NKI+++ +E A +E ++
Sbjct: 101 GAILVVSATDGA-MPQTKEHILLARQVGVPYIVVFLNKIDMISEEDAELVDLVE--MELA 157
Query: 165 EFIEGTVAENAPIIPISALHGANIDV--------LVKAIEDFIPTPKRDPNKPPKMLVLR 216
E +E + PII SAL D L++A++D IPTP+R+ +KP M +
Sbjct: 158 ELLEEKGYKGCPIIRGSALKALEGDAAYIEKVRELMQAVDDNIPTPEREIDKPFLMPIED 217
Query: 217 SFDVNKPGTPPEKLVGGVLGGSIVQGKLKVGDEIEIRPGVPYEEHGRIKYEPITTEIVSL 276
F ++ GT V+ G I +G +KV D++++ G+ R E + +
Sbjct: 218 VFSISGRGT--------VVTGRIERGIVKVSDKVQL-VGL------RDTKETLLLGLEMF 262
Query: 277 QAGGQFVEEAYPGGLV--GVGTKLDPYLTKGDLMAGNVVGKPGKLPPVWDSLRLEVHLLE 334
+ Q V GL+ G+G K D+ G VV P + P + V++L+
Sbjct: 263 RKNSQKVRAGENVGLLLRGIG--------KNDVERGMVVCLPNSVKP-HTRFKCAVYVLQ 313
Query: 335 RVVGTEQELKVEPIKRKEVLLLNVGTARTMGLVTGL------GKDEIEVKLQIPVCAEPG 388
+ G + R + L + L G+ E EV+L PV E G
Sbjct: 314 KEEGGRHKPFFTGY-RPQFFFLTTDVTGVVTLPEGVEMVMPGDNVEFEVQLISPVALEEG 372
Query: 389 DRVAISRQIGSRWRLIGYGIIKE 411
R AI R+ G R IG G I +
Sbjct: 373 MRFAI-REGG---RTIGAGTISK 391
>dbj|BAA07492.1| (D38472) elongation factor Tu homologue precursor [Caenorhabditis
elegans]
Length = 495
Score = 113 bits (279), Expect = 5e-24
Identities = 118/444 (26%), Positives = 193/444 (42%), Gaps = 90/444 (20%)
Query: 6 KSRQAEVNIGMVGHVDHGKTTLTKALTGVWT-------------DTHSEELRRGITIKIG 52
K + +N+G +GHVDHGKTTLT A+T + D EE RGITI
Sbjct: 44 KRDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYEDIDNAPEEKARGITINAF 103
Query: 53 FADAEIRRCPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMDGAI 112
+ E + R + ID PGH + M+ GA+ M+GAI
Sbjct: 104 HLEYETAK-----------------------RHYAHIDCPGHADYIKNMITGAAQMEGAI 140
Query: 113 LVIAANEPCPRPQTREHLMALQIIG--QKNIIIAQNKI-ELVDKEK----ALENYRQIKE 165
LV+AA + P PQTREHL+ + +G NI++ NK+ E+ D E ++ Q+ E
Sbjct: 141 LVVAATDG-PMPQTREHLLLARQVGVPLDNIVVFMNKVDEVPDAETRELVEMDIREQLNE 199
Query: 166 FIEGTVAENAPII---PISALHGANIDV-------LVKAIEDFIPTPKRDPNKPPKMLVL 215
F G + P+I + AL G ++ L++ +++ P+R N+ P
Sbjct: 200 F--GYPGDTCPVIFGSALCALEGKQPEIGEEAVKQLLEVLDNKFVIPERKVNEEPMFAAE 257
Query: 216 RSFDVNKPGTPPEKLVGGVLGGSIVQGKLKVGDEIEIRPGVPYEEHGRIKYEPITTEIVS 275
+ + GT V+ G + +G LK GD+IEI G + + I
Sbjct: 258 HVYSIVGRGT--------VITGKLERGILKRGDKIEIVGGTK-------DGTTVKSVISG 302
Query: 276 LQAGGQFVEEAYPGGLVGVGTKLDPYLTKGDLMAGNVVGKPGKLPPVWDSLRLEVHLLER 335
L++ + V++A PG +GV L L D+ G V+ G V D ++ ++++L+
Sbjct: 303 LESFRKTVDQAEPGDQLGV---LLRGLGPKDVRRGCVLLPQGHKHKVTDKVKAQLYVLKE 359
Query: 336 VVGTEQELKVEPIKRKEVLLLNVGTARTMGLVTGLGKD--------EIEVKLQIPVCAEP 387
G + + + V L + ++ ++ GKD E+E+ L + EP
Sbjct: 360 SEG-GAKTPIANYFSEHVFSLTWDSGASVRII---GKDFVMPGESAEVELSLNSQMFIEP 415
Query: 388 GDRVAISRQIGSRWRLIGYGIIKE 411
R I + + IG G+ +
Sbjct: 416 QQRFTIRKGA----KTIGTGVFTD 435
>dbj|BAA07491.1| (D38471) elongation factor Tu homologue precursor [Caenorhabditis
elegans]
Length = 496
Score = 113 bits (279), Expect = 5e-24
Identities = 118/444 (26%), Positives = 193/444 (42%), Gaps = 90/444 (20%)
Query: 6 KSRQAEVNIGMVGHVDHGKTTLTKALTGVWT-------------DTHSEELRRGITIKIG 52
K + +N+G +GHVDHGKTTLT A+T + D EE RGITI
Sbjct: 45 KRDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYEDIDNAPEEKARGITINAF 104
Query: 53 FADAEIRRCPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMDGAI 112
+ E + R + ID PGH + M+ GA+ M+GAI
Sbjct: 105 HLEYETAK-----------------------RHYAHIDCPGHADYIKNMITGAAQMEGAI 141
Query: 113 LVIAANEPCPRPQTREHLMALQIIG--QKNIIIAQNKI-ELVDKEK----ALENYRQIKE 165
LV+AA + P PQTREHL+ + +G NI++ NK+ E+ D E ++ Q+ E
Sbjct: 142 LVVAATDG-PMPQTREHLLLARQVGVPLDNIVVFMNKVDEVPDAETRELVEMDIREQLNE 200
Query: 166 FIEGTVAENAPII---PISALHGANIDV-------LVKAIEDFIPTPKRDPNKPPKMLVL 215
F G + P+I + AL G ++ L++ +++ P+R N+ P
Sbjct: 201 F--GYPGDTCPVIFGSALCALEGKQPEIGEEAVKQLLEVLDNKFVIPERKVNEEPMFAAE 258
Query: 216 RSFDVNKPGTPPEKLVGGVLGGSIVQGKLKVGDEIEIRPGVPYEEHGRIKYEPITTEIVS 275
+ + GT V+ G + +G LK GD+IEI G + + I
Sbjct: 259 HVYSIVGRGT--------VITGKLERGILKRGDKIEIVGGTK-------DGTTVKSVISG 303
Query: 276 LQAGGQFVEEAYPGGLVGVGTKLDPYLTKGDLMAGNVVGKPGKLPPVWDSLRLEVHLLER 335
L++ + V++A PG +GV L L D+ G V+ G V D ++ ++++L+
Sbjct: 304 LESFRKTVDQAEPGDQLGV---LLRGLGPKDVRRGCVLLPQGHKHKVTDKVKAQLYVLKE 360
Query: 336 VVGTEQELKVEPIKRKEVLLLNVGTARTMGLVTGLGKD--------EIEVKLQIPVCAEP 387
G + + + V L + ++ ++ GKD E+E+ L + EP
Sbjct: 361 SEG-GAKTPIANYFSEHVFSLTWDSGASVRII---GKDFVMPGESAEVELSLNSQMFIEP 416
Query: 388 GDRVAISRQIGSRWRLIGYGIIKE 411
R I + + IG G+ +
Sbjct: 417 QQRFTIRKGA----KTIGTGVFTD 436
>sp|O63930|EFTU_GYMST CHLOROPLAST EF-TU >gi|3097302|dbj|BAA25891.1| (AB008007)
chloroplast EF-Tu [Gymnochlora stellata]
Length = 363
Score = 113 bits (279), Expect = 5e-24
Identities = 107/383 (27%), Positives = 177/383 (45%), Gaps = 75/383 (19%)
Query: 37 DTHSEELRRGITIKIGFADAEIRRCPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEA 96
D+ EE RGITI + +ETE R + +D PGH
Sbjct: 25 DSAPEEKARGITINTAHVE----------------------YETE-TRHYAHVDCPGHAD 61
Query: 97 LMTTMLAGASLMDGAILVIAANEPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKA 156
+ M+ GA+ MDGAILV++ + P PQT+EHL+ + +G +I++ NK + VD E+
Sbjct: 62 YVKNMITGAAQMDGAILVVSGADG-PMPQTKEHLLLAKQVGVPSIVVFLNKEDQVDDEEL 120
Query: 157 LENYR-QIKEFIEG--TVAENAPIIPISAL--------------HGAN-----IDVLVKA 194
LE +++E ++ ++ PII SAL G+N I L+
Sbjct: 121 LELVELEVREMLDNYDFPGDDTPIITGSALLALQALTDTTDAIGRGSNPWVDKILTLMDN 180
Query: 195 IEDFIPTPKRDPNKPPKMLVLRSFDVNKPGTPPEKLVGGVLGGSIVQGKLKVGDEIEIRP 254
++++IPTP+R+ KP M V F + GT V G + +G +K+GD +EI
Sbjct: 181 VDEYIPTPERETEKPFLMAVEDVFSITGRGT--------VATGRVERGGIKIGDTVEI-V 231
Query: 255 GVPYEEHGRIKYEPITTEIVSLQAGGQFVEEAYPGGLVGVGTKLDPYLTKGDLMAGNVVG 314
G+ E +T + L+ + ++E+ G VG+ L + K D+ G V+
Sbjct: 232 GLK---------ETRSTTVTGLKMFQKMLQESIAGDNVGM---LLRGIQKTDIQRGMVIA 279
Query: 315 KPGKLPPVWDSLRLEVHLLERVVGTEQELKVEPIKRKEVLLLNVGTARTMGLVTGLGKDE 374
+PG + P S +V++L + G + + + V T G V L DE
Sbjct: 280 QPGSITP-HVSFEAQVYVLTKEEGGRHTPFLSGYRPQ----FYVRTTDVTGKVESLKSDE 334
Query: 375 IEVKLQIPVCAEPGDRVAISRQI 397
+ ++++ V PGDRV +S ++
Sbjct: 335 DKSEMKMVV---PGDRVTMSVEL 354
>gb|AAC94985.1| (AF037999) elongation factor Tu [Eustigmatos magnus]
Length = 366
Score = 113 bits (279), Expect = 5e-24
Identities = 111/383 (28%), Positives = 174/383 (44%), Gaps = 77/383 (20%)
Query: 37 DTHSEELRRGITIKIGFADAEIRRCPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEA 96
D EE RGITI + +ETE R + +D PGH
Sbjct: 24 DAAPEEKARGITINTAHVE----------------------YETE-ARHYAHVDCPGHAD 60
Query: 97 LMTTMLAGASLMDGAILVIAANEPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKA 156
+ M+ GA+ MDGAILV++A + P PQTREH++ + +G +I++ NK + VD ++
Sbjct: 61 YVKNMITGAAQMDGAILVVSAADG-PMPQTREHILLAKQVGVPHIVVFLNKADQVDDQEL 119
Query: 157 LENYR-QIKEFIE--GTVAENAPIIPISAL-------------HGAN-----IDVLVKAI 195
LE +++E + E+ P I SAL G N I L+ A+
Sbjct: 120 LELVELEVRELLSTYDFPGEDIPFISGSALLALEAVTTNSVNQRGENEWVDKIFELMDAV 179
Query: 196 EDFIPTPKRDPNKPPKMLVLRSFDVNKPGTPPEKLVGGVLGGSIVQGKLKVGDEIEIRPG 255
+ +IPTP+RD +K M V F + GT V G I +GK+KVG+ IEI G
Sbjct: 180 DSYIPTPERDVDKTFLMAVEDVFSITGRGT--------VATGRIERGKVKVGETIEI-VG 230
Query: 256 VPYEEHGRIKYEPITTEIVSLQAGGQFVEEAYPGGLVGVGTKLDPYLTKGDLMAGNVVGK 315
+ E +T + L+ + ++E + G VG+ L + K D+ G V+ K
Sbjct: 231 I---------QETRSTTVTGLEMFQKTLDEGFAGDNVGI---LLRGVQKTDIQRGMVLAK 278
Query: 316 PGKLPPVWDSLRLEVHLLERVVGTEQELKVEPIKRKEVLLLNVGTARTMGLVTGLGKDE- 374
PG + P EV++L++ E+ + P V T G +TG D+
Sbjct: 279 PGTIKP-HRKFEAEVYVLKK----EEGGRHTPFLAGYRPQFYVRTTDVTGNITGFTSDDG 333
Query: 375 IEVKLQIPVCAEPGDRVAISRQI 397
E ++ I PGDR+ ++ ++
Sbjct: 334 AEAEMVI-----PGDRIKMTAEL 351
>sp|P14081|SELB_ECOLI SELENOCYSTEINE-SPECIFIC ELONGATION FACTOR (SELB TRANSLATION FACTOR)
>gi|72878|pir||EFECSB translation elongation factor
EF-selB - Escherichia coli >gi|42937|emb|CAA34637.1|
(X16644) SEL B (AA 1-614) [Escherichia coli]
>gi|2367247|gb|AAC76614.1| (AE000436)
selenocysteinyl-tRNA-specific translation factor
[Escherichia coli K12] >gi|226567|prf||1602238A
translation factor [Escherichia coli]
Length = 614
Score = 111 bits (276), Expect = 1e-23
Identities = 112/401 (27%), Positives = 177/401 (43%), Gaps = 70/401 (17%)
Query: 14 IGMVGHVDHGKTTLTKALTGVWTDTHSEELRRGITIKIGFADAEIRRCPNCGRYSTSPVC 73
I GHVDHGKTTL +A+TGV D EE +RG+TI +G+A Y P
Sbjct: 3 IATAGHVDHGKTTLLQAITGVNADRLPEEKKRGMTIDLGYA------------YWPQP-- 48
Query: 74 PYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMDGAILVIAANEPCPRPQTREHLMAL 133
R FID PGHE ++ MLAG +D A+LV+A ++ QTREHL L
Sbjct: 49 --------DGRVPGFIDVPGHEKFLSNMLAGVGGIDHALLVVACDDGV-MAQTREHLAIL 99
Query: 134 QIIGQKNIIIAQNKIELVDKEKALENYRQIKEFIEGTVAENAPIIPISALHGANIDVLVK 193
Q+ G + +A K + VD+ + E RQ+KE + A + +A G +D L
Sbjct: 100 QLTGNPMLTVALTKADRVDEARVDEVERQVKEVLREYGFAEAKLFITAATEGRGMDAL-- 157
Query: 194 AIEDFIPTPKRD--PNKPPKMLVLRSFDVNKPGTPPEKLVGGVLGGSIVQGKLKVGDEIE 251
E + P+R+ ++ + R+F V K G V+ G+ + G++KVGD +
Sbjct: 158 -REHLLQLPEREHASQHSFRLAIDRAFTV--------KGAGLVVTGTALSGEVKVGDSLW 208
Query: 252 IRPGVPYEEHGRIKYEPITTEIVSLQAGGQFVEEAYPGGLVGV---GTKLDPYLTKGDLM 308
+ GV +P+ + +L A Q E A G + + G + +GD +
Sbjct: 209 L-TGV---------NKPM--RVRALHAQNQPTETANAGQRIALNIAGDAEKEQINRGDWL 256
Query: 309 AGNVVGKPGKLPPVWDSLRLEVHLLERVVGTEQELKVEPIKRKEVLLLNVGTARTMGLVT 368
+V +P V L+ H P+ + + L ++ + G V+
Sbjct: 257 LADVPPEPFTRVIV----ELQTH--------------TPLTQWQPLHIHHAASHVTGRVS 298
Query: 369 GLGKDEIEVKLQIPVCAEPGDRVAISRQIGSRWRLIGYGII 409
L + E+ P+ DR+ + R I +R L G ++
Sbjct: 299 LLEDNLAELVFDTPLWLADNDRLVL-RDISARNTLAGARVV 338
>gb|AAB18567.1| (U00039) CG Site No. 17890 [Escherichia coli]
Length = 620
Score = 111 bits (276), Expect = 1e-23
Identities = 112/401 (27%), Positives = 177/401 (43%), Gaps = 70/401 (17%)
Query: 14 IGMVGHVDHGKTTLTKALTGVWTDTHSEELRRGITIKIGFADAEIRRCPNCGRYSTSPVC 73
I GHVDHGKTTL +A+TGV D EE +RG+TI +G+A Y P
Sbjct: 3 IATAGHVDHGKTTLLQAITGVNADRLPEEKKRGMTIDLGYA------------YWPQP-- 48
Query: 74 PYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMDGAILVIAANEPCPRPQTREHLMAL 133
R FID PGHE ++ MLAG +D A+LV+A ++ QTREHL L
Sbjct: 49 --------DGRVPGFIDVPGHEKFLSNMLAGVGGIDHALLVVACDDGV-MAQTREHLAIL 99
Query: 134 QIIGQKNIIIAQNKIELVDKEKALENYRQIKEFIEGTVAENAPIIPISALHGANIDVLVK 193
Q+ G + +A K + VD+ + E RQ+KE + A + +A G +D L
Sbjct: 100 QLTGNPMLTVALTKADRVDEARVDEVERQVKEVLREYGFAEAKLFITAATEGRGMDAL-- 157
Query: 194 AIEDFIPTPKRD--PNKPPKMLVLRSFDVNKPGTPPEKLVGGVLGGSIVQGKLKVGDEIE 251
E + P+R+ ++ + R+F V K G V+ G+ + G++KVGD +
Sbjct: 158 -REHLLQLPEREHASQHSFRLAIDRAFTV--------KGAGLVVTGTXLSGEVKVGDSLW 208
Query: 252 IRPGVPYEEHGRIKYEPITTEIVSLQAGGQFVEEAYPGGLVGV---GTKLDPYLTKGDLM 308
+ GV +P+ + +L A Q E A G + + G + +GD +
Sbjct: 209 L-TGV---------NKPM--RVRALHAQNQPTETANAGQRIALNIAGDAEKEQINRGDWL 256
Query: 309 AGNVVGKPGKLPPVWDSLRLEVHLLERVVGTEQELKVEPIKRKEVLLLNVGTARTMGLVT 368
+V +P V L+ H P+ + + L ++ + G V+
Sbjct: 257 LADVPPEPFTRVIV----ELQTH--------------TPLTQWQPLHIHHAASHVTGRVS 298
Query: 369 GLGKDEIEVKLQIPVCAEPGDRVAISRQIGSRWRLIGYGII 409
L + E+ P+ DR+ + R I +R L G ++
Sbjct: 299 LLEDNLAELVFDTPLWLADNDRLVL-RDISARNTLAGARVV 338
>pir||JC1420 translation elongation factor EF-Tu - Chlamydia trachomatis
Length = 394
Score = 111 bits (276), Expect = 1e-23
Identities = 123/443 (27%), Positives = 193/443 (42%), Gaps = 89/443 (20%)
Query: 3 EKRKSRQAEVNIGMVGHVDHGKTTLTKALTGVWT-------------DTHSEELRRGITI 49
E + + +NIG +GHVDHG+TTLT A+T + D EE RGI I
Sbjct: 4 ETFQRNKPHINIGAIGHVDHGRTTLTAAITRTLSGDGLADFRDYSSIDNTPEEKARGIPI 63
Query: 50 KIGFADAEIRRCPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMD 109
+ E R + +D P H + M+ GA+ MD
Sbjct: 64 NASHVEYETAN-----------------------RHYAHVDCPCHADYVKNMITGAAQMD 100
Query: 110 GAILVIAANEPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKA-----LENYRQIK 164
GAILV++A + PQT+EH++ + +G I++ NKI+++ +E A +E ++
Sbjct: 101 GAILVVSATDGA-MPQTKEHILLARQVGVPYIVVFLNKIDMISEEDAELVDLVE--MELA 157
Query: 165 EFIEGTVAENAPIIPISALHGANID---VLVKA-----IEDFIPTPKRDPNKPPKMLVLR 216
E +E + PII SAL I+ L++A ++D IPTP+R+ +KP M +
Sbjct: 158 ELLEEKGYKGCPIIRGSALKALEIEKVRELMQAGDAAYVDDNIPTPEREIDKPFLMPIED 217
Query: 217 SFDVNKPGTPPEKLVGGVLGGSIVQGKLKVGDEIEIRPGVPYEEHGRIKYEPITTEIVSL 276
F ++ GT V+ G I +G +KV D++++ G+ R E + +
Sbjct: 218 VFSISGRGT--------VVTGRIERGIVKVSDKVQL-VGL------RDTKETLLLGLEMF 262
Query: 277 QAGGQFVEEAYPGGLV--GVGTKLDPYLTKGDLMAGNVVGKPGKLPPVWDSLRLEVHLLE 334
+ Q V GL+ G+G K D+ G VV P + P + V++L+
Sbjct: 263 RKNSQKVRAGENVGLLLRGIG--------KNDVERGMVVCLPNSVKP-HTRFKCAVYVLQ 313
Query: 335 RVVGTEQELKVEPIKRKEVLLLNVGTARTMGLVTGL------GKDEIEVKLQIPVCAEPG 388
+ G + R + L + L G+ E EV+L PV E G
Sbjct: 314 KEEGGRHKPFFTGY-RPQFFFLTTDVTGVVTLPEGVEMVMPGDNVEFEVQLISPVALEEG 372
Query: 389 DRVAISRQIGSRWRLIGYGIIKE 411
R AI R+ G R IG G I +
Sbjct: 373 MRFAI-REGG---RTIGAGTISK 391
>gb|AAC94986.1| (AF038000) elongation factor Tu [Ophiocytium majus]
Length = 366
Score = 110 bits (272), Expect = 3e-23
Identities = 109/383 (28%), Positives = 173/383 (44%), Gaps = 77/383 (20%)
Query: 37 DTHSEELRRGITIKIGFADAEIRRCPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEA 96
D EE RGITI + +ETE R + +D PGH
Sbjct: 24 DAAPEEKARGITINTAHVE----------------------YETE-ARHYAHVDCPGHAD 60
Query: 97 LMTTMLAGASLMDGAILVIAANEPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKA 156
+ M+ GA+ MDGAILV++A + P PQTREH++ + +G +I++ NK + VD ++
Sbjct: 61 YVKNMITGAAQMDGAILVVSAADG-PMPQTREHILLAKQVGVPHIVVFLNKADQVDDQEL 119
Query: 157 LENYR-QIKEFIEG--TVAENAPIIPISAL-------------HGAN-----IDVLVKAI 195
LE +++E + ++ P I SAL G N I L+ A+
Sbjct: 120 LELVELEVRELLSAYDFPGDDIPFISGSALLALEAVTTNSVNQRGENEWVDKIFELMDAV 179
Query: 196 EDFIPTPKRDPNKPPKMLVLRSFDVNKPGTPPEKLVGGVLGGSIVQGKLKVGDEIEIRPG 255
+ +IPTP+RD +K M V F + GT V G I +GK+KVG+ IEI G
Sbjct: 180 DKYIPTPERDVDKTFLMAVEDVFSITGRGT--------VATGRIERGKVKVGETIEI-VG 230
Query: 256 VPYEEHGRIKYEPITTEIVSLQAGGQFVEEAYPGGLVGVGTKLDPYLTKGDLMAGNVVGK 315
+ E + + L+ + ++E + G VG+ L + K D+ G V+ K
Sbjct: 231 I---------QETRSVTVTGLEMFQKTLDEGFAGDNVGI---LLRGVQKTDIQRGMVLAK 278
Query: 316 PGKLPPVWDSLRLEVHLLERVVGTEQELKVEPIKRKEVLLLNVGTARTMGLVTGLGKDE- 374
PG + P EV++L++ E+ + P V T G +TG D+
Sbjct: 279 PGTIKP-HRKFEAEVYVLKK----EEGGRHTPFLAGYRPQFYVRTTDVTGSITGFTSDDG 333
Query: 375 IEVKLQIPVCAEPGDRVAISRQI 397
E ++ I PGDR+ ++ ++
Sbjct: 334 AEAEMVI-----PGDRIKMTAEL 351
>gb|AAC94983.1| (AF037997) elongation factor Tu [Nannochloropsis oculata]
Length = 366
Score = 109 bits (271), Expect = 4e-23
Identities = 106/382 (27%), Positives = 168/382 (43%), Gaps = 75/382 (19%)
Query: 37 DTHSEELRRGITIKIGFADAEIRRCPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEA 96
D EE RGITI + +ETE R + +D PGH
Sbjct: 24 DAAPEEKARGITINTAHVE----------------------YETES-RHYAHVDCPGHAD 60
Query: 97 LMTTMLAGASLMDGAILVIAANEPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKA 156
+ M+ GA+ MDGAILV++A + P PQTREH++ + +G ++++ NK + VD ++
Sbjct: 61 YVKNMITGAAQMDGAILVVSAADG-PMPQTREHILLAKQVGVPHVVVFLNKADQVDDDEL 119
Query: 157 LENYR-QIKEFIEG--TVAENAPIIPISAL-------------HGAN-----IDVLVKAI 195
LE +++E + E P + SAL G N I L+ A+
Sbjct: 120 LELVELEVRELLSNYDFPVEEIPFVSGSALLALEAVTNATVTKRGENQWVDKIFDLMDAV 179
Query: 196 EDFIPTPKRDPNKPPKMLVLRSFDVNKPGTPPEKLVGGVLGGSIVQGKLKVGDEIEIRPG 255
+ +IPTP RD +K M V F + GT V G I +G +KVG+ IEI
Sbjct: 180 DSYIPTPVRDVDKTFLMAVEDVFSITGRGT--------VATGRIERGTVKVGETIEIIGI 231
Query: 256 VPYEEHGRIKYEPITTEIVSLQAGGQFVEEAYPGGLVGVGTKLDPYLTKGDLMAGNVVGK 315
V E TT + L+ + ++E + G +G+ L + KGD+ G V+ K
Sbjct: 232 V----------ETKTTTVTGLEMFQKTLDEGFAGDNIGI---LLRGVQKGDIQRGMVLAK 278
Query: 316 PGKLPPVWDSLRLEVHLLERVVGTEQELKVEPIKRKEVLLLNVGTARTMGLVTGLGKDEI 375
PG + P EV++L++ G + + + V T G +TG D+
Sbjct: 279 PGTIKP-HKRFEAEVYILKKEEGGRHTPFLPGYRPQ----FYVRTTDVTGNITGFTADDG 333
Query: 376 EVKLQIPVCAEPGDRVAISRQI 397
+ PGDR+ ++ ++
Sbjct: 334 AAAEMV----IPGDRIKMTAEL 351
>pir||E71354 probable translation elongation factor EF-Tu (tuf) - syphilis
spirochete >gi|3322451|gb|AAC65172.1| (AE001202)
translation elongation factor TU (tuf) [Treponema
pallidum]
Length = 495
Score = 109 bits (269), Expect = 7e-23
Identities = 92/344 (26%), Positives = 154/344 (44%), Gaps = 70/344 (20%)
Query: 3 EKRKSRQAEVNIGMVGHVDHGKTTLTKALTGVWT-------------DTHSEELRRGITI 49
EK + +N+G +GHVDHGKTTL+ A+T D EE RGITI
Sbjct: 104 EKFARTKVHMNVGTIGHVDHGKTTLSAAITSYCAKKFGDKQLKYDEIDNAPEEKARGITI 163
Query: 50 KIGFADAEIRRCPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMD 109
+ + R R + ID PGH + M+ GA+ MD
Sbjct: 164 NTRHLEYQSDR-----------------------RHYAHIDCPGHADYVKNMITGAAQMD 200
Query: 110 GAILVIAANEPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALENY-RQIKEFIE 168
G ILV++A + PQT+EHL+ + +G +II+ NK++LVD + LE ++++ +
Sbjct: 201 GGILVVSAPDGV-MPQTKEHLLLARQVGVPSIIVFLNKVDLVDDPELLELVEEEVRDALA 259
Query: 169 G-TVAENAPIIPISAL----------HGANIDVLVKAIEDFIPTPKRDPNKPPKMLVLRS 217
G + PI+ SA A I+ L+ A++ + P RD +P + +
Sbjct: 260 GYGFSRETPIVKGSAFKALQDGASPEDAACIEELLAAMDSYFEDPVRDDARPFLLSIEDV 319
Query: 218 FDVNKPGTPPEKLVGGVLGGSIVQGKLKVGDEIEIRPGVPYEEHGRIKYEPITTEIVSLQ 277
+ ++ GT V+ G I G + + +E+EI P ++ T + ++
Sbjct: 320 YTISGRGT--------VVTGRIECGVISLNEEVEIVGIKPTKK----------TVVTGIE 361
Query: 278 AGGQFVEEAYPGGLVGVGTKLDPYLTKGDLMAGNVVGKPGKLPP 321
+ +++ G VG+ L + K ++ G V+ KPG + P
Sbjct: 362 MFNKLLDQGIAGDNVGL---LLRGVDKKEVERGQVLSKPGSIKP 402
>sp|O83217|EFTU_TREPA ELONGATION FACTOR TU (EF-TU)
Length = 395
Score = 109 bits (269), Expect = 7e-23
Identities = 92/344 (26%), Positives = 154/344 (44%), Gaps = 70/344 (20%)
Query: 3 EKRKSRQAEVNIGMVGHVDHGKTTLTKALTGVWT-------------DTHSEELRRGITI 49
EK + +N+G +GHVDHGKTTL+ A+T D EE RGITI
Sbjct: 4 EKFARTKVHMNVGTIGHVDHGKTTLSAAITSYCAKKFGDKQLKYDEIDNAPEEKARGITI 63
Query: 50 KIGFADAEIRRCPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMD 109
+ + R R + ID PGH + M+ GA+ MD
Sbjct: 64 NTRHLEYQSDR-----------------------RHYAHIDCPGHADYVKNMITGAAQMD 100
Query: 110 GAILVIAANEPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALENY-RQIKEFIE 168
G ILV++A + PQT+EHL+ + +G +II+ NK++LVD + LE ++++ +
Sbjct: 101 GGILVVSAPDGV-MPQTKEHLLLARQVGVPSIIVFLNKVDLVDDPELLELVEEEVRDALA 159
Query: 169 G-TVAENAPIIPISAL----------HGANIDVLVKAIEDFIPTPKRDPNKPPKMLVLRS 217
G + PI+ SA A I+ L+ A++ + P RD +P + +
Sbjct: 160 GYGFSRETPIVKGSAFKALQDGASPEDAACIEELLAAMDSYFEDPVRDDARPFLLSIEDV 219
Query: 218 FDVNKPGTPPEKLVGGVLGGSIVQGKLKVGDEIEIRPGVPYEEHGRIKYEPITTEIVSLQ 277
+ ++ GT V+ G I G + + +E+EI P ++ T + ++
Sbjct: 220 YTISGRGT--------VVTGRIECGVISLNEEVEIVGIKPTKK----------TVVTGIE 261
Query: 278 AGGQFVEEAYPGGLVGVGTKLDPYLTKGDLMAGNVVGKPGKLPP 321
+ +++ G VG+ L + K ++ G V+ KPG + P
Sbjct: 262 MFNKLLDQGIAGDNVGL---LLRGVDKKEVERGQVLSKPGSIKP 302
>gb|AAC94984.1| (AF037998) elongation factor Tu [Monodus sp. CCMP505]
Length = 366
Score = 108 bits (266), Expect = 2e-22
Identities = 105/382 (27%), Positives = 167/382 (43%), Gaps = 75/382 (19%)
Query: 37 DTHSEELRRGITIKIGFADAEIRRCPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEA 96
D EE RGITI + +ETE R + +D PGH
Sbjct: 24 DAAPEEKARGITINTAHVE----------------------YETE-ARHYAHVDCPGHAD 60
Query: 97 LMTTMLAGASLMDGAILVIAANEPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKA 156
+ M+ GA+ MDGAILV++A + P PQTREH++ + +G ++++ NK + VD ++
Sbjct: 61 YVKNMITGAAQMDGAILVVSAADG-PMPQTREHILLAKQVGVPHVVVFLNKADQVDDDEL 119
Query: 157 LENYR-QIKEFIEG--TVAENAPIIPISAL-------------HGAN-----IDVLVKAI 195
LE +++E + E P + SAL G N I L+ A+
Sbjct: 120 LELVELEVRELLSNYDFPGEEIPFVSGSALLALEAVSNATVTKRGENPWVDKIFDLMDAV 179
Query: 196 EDFIPTPKRDPNKPPKMLVLRSFDVNKPGTPPEKLVGGVLGGSIVQGKLKVGDEIEIRPG 255
+ +IPTP RD +K M V F + T V G I +G +KVG+ IEI
Sbjct: 180 DSYIPTPVRDVDKTXLMAVEDVFSITGRVT--------VATGRIERGTVKVGETIEIIGI 231
Query: 256 VPYEEHGRIKYEPITTEIVSLQAGGQFVEEAYPGGLVGVGTKLDPYLTKGDLMAGNVVGK 315
V E TT + L+ + ++E + G +G+ L + KGD+ G V+ K
Sbjct: 232 V----------ETKTTTVTGLEMFQKTLDEGFAGDNIGI---LLRGVQKGDIQRGMVLAK 278
Query: 316 PGKLPPVWDSLRLEVHLLERVVGTEQELKVEPIKRKEVLLLNVGTARTMGLVTGLGKDEI 375
PG + P EV++L++ G + + + V T G +TG D+
Sbjct: 279 PGTIKP-HKRFEAEVYILKKEEGGRHTPFLPGYRPQ----FYVRTTDVTGNITGFTADDG 333
Query: 376 EVKLQIPVCAEPGDRVAISRQI 397
+ PGDR+ ++ ++
Sbjct: 334 AAAEMV----IPGDRIKMTAEL 351
>pir||S11997 translation elongation factor Tu - Mycoplasma pneumoniae (SGC3)
>gi|288178|emb|CAA39292.1| (X55768) elongation factor
[Mycoplasma pneumoniae]
Length = 404
Score = 106 bits (263), Expect = 4e-22
Identities = 112/437 (25%), Positives = 187/437 (42%), Gaps = 81/437 (18%)
Query: 3 EKRKSRQAEVNIGMVGHVDHGKTTLTKALTGVWT-------------DTHSEELRRGITI 49
EK + ++N+G +GH+DHGKTTLT A+ V D EE RGITI
Sbjct: 4 EKFDRSKPQLNVGTIGHIDHGKTTLTAAICTVLAKEGKSAATRYDQIDKAPEEKARGITI 63
Query: 50 KIGFADAEIRRCPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMD 109
I + YS+ R + +D PGH + M+ GA+ MD
Sbjct: 64 NIAHVE-----------YSSDK------------RHYAHVDCPGHADYIKNMITGAAQMD 100
Query: 110 GAILVIAANEPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALENY-RQIKEFIE 168
GAILV++A + PQTREH++ + +G +++ K ++ E+ E ++++ +
Sbjct: 101 GAILVVSATDSV-MPQTREHILVARQVGVPRMVVFLFKCDIATDEEVQELVAEEVRDLLT 159
Query: 169 --GTVAENAPIIPISALHG--------ANIDVLVKAIEDFIPTPKRDPNKPPKMLVLRSF 218
G +N PII SAL A I L+ A++D P + + +
Sbjct: 160 SYGFDGKNTPIIYGSALKALEGDPKWEAKIHDLMNAVDDGFQLLNVKWTNPFLLAIEDTM 219
Query: 219 DVNKPGTPPEKLVGGVLGGSIVQGKLKVGDEIEIRPGVPYEEHGRIKYEPITTEIVS-LQ 277
+ GT V+ G + +G+LKVG EIEI + PI +V+ ++
Sbjct: 220 TITGRGT--------VVTGRVERGELKVGQEIEI-----------VGLRPIRKAVVTGIE 260
Query: 278 AGGQFVEEAYPGGLVGVGTKLDPYLTKGDLMAGNVVGKPGKLPPVWDSLRLEVHLLE--- 334
+ ++ A G GV L + + ++ G V+ KPG + P + E++ L+
Sbjct: 261 MFKKVLDSAMAGDNAGV---LLRGVDRKEVERGQVLAKPGSIKP-HKKFKAEIYALKKEE 316
Query: 335 --RVVGTEQELKVEPIKRKEVLLLNVGTARTMGLVTGLGKDEIEVKLQIPVCAEPGDRVA 392
R G + + R + ++ +V I V+L P+ E G + +
Sbjct: 317 GGRHTGFLNGYRPQFYFRTTDVTGSISLPENTEMVLPGDNTSISVELIAPIACEKGSKFS 376
Query: 393 ISRQIGSRWRLIGYGII 409
I R+ G R +G G +
Sbjct: 377 I-REGG---RTVGAGSV 389
>sp|Q9ZEU3|EFTU_APPPP ELONGATION FACTOR TU (EF-TU) >gi|4127382|emb|CAA09488.1| (AJ011104)
elongation factor TU [Apple proliferation phytoplasma]
Length = 392
Score = 106 bits (263), Expect = 4e-22
Identities = 112/430 (26%), Positives = 190/430 (44%), Gaps = 77/430 (17%)
Query: 9 QAEVNIGMVGHVDHGKTTLTKALTGVWT-------------DTHSEELRRGITIKIGFAD 55
+ VN+G +GHVDHGKTTLT A+T + + D EE RGITI
Sbjct: 10 KVHVNVGTIGHVDHGKTTLTAAITKILSTKGLAENKSYDQIDKTKEEKERGITIN----- 64
Query: 56 AEIRRCPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMDGAILVI 115
+ +ET R + +D PGH + M+ GA+ MD ILV+
Sbjct: 65 -----------------TTHVSYET-VKRHYAHVDCPGHADYVKNMITGAAQMDAGILVV 106
Query: 116 AANEPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALENYR-QIKEFIEGTV--A 172
+A PQTREH++ +G +I+ NK +LV +E+ + +++E +
Sbjct: 107 SAYHGV-MPQTREHVLLAGQVGISKLIVFLNKCDLVKEEEWIHLVEMEVRELLNEYKFDG 165
Query: 173 ENAPII---PISALHGAN---IDVLVKAIEDFIPTPKRDPNKPPKMLVLRSFDVNKPGTP 226
+ P + + AL G + I+ L++ ++++I P RD KP M V + GT
Sbjct: 166 DKTPFVRGSALKALEGTDVEGINKLLEVLDEYIEDPIRDVEKPFLMPVEGVHTITGRGT- 224
Query: 227 PEKLVGGVLGGSIVQGKLKVGDEIEIRPGVPYEEHGRIKYEPITTEIVSLQAGGQFVEEA 286
V G + +GK+K+ +E+EI + +E + I L+ + ++ A
Sbjct: 225 -------VATGRVERGKIKISEEVEI---IGLKETKK-------AIITGLEMFKKELDFA 267
Query: 287 YPGGLVGVGTKLDPYLTKGDLMAGNVVGKPGKLPPVWDSLRLEVHLLERVVGTE-----Q 341
G VG+ L +T+ + G V+ KPG L + +V++L + G
Sbjct: 268 QAGDNVGI---LLRGITRDQIERGQVLAKPGSL-NAYHKFLSQVYILTQQEGGRHTAFFS 323
Query: 342 ELKVEPIKRKEVLLLNVGTARTMGLVTGLGKDEIEVKLQIPVCAEPGDRVAISRQIGSRW 401
+ + R + + + + +V + E+ V+L P+ E G + +I R+ G
Sbjct: 324 NYRPQFYFRTTDVTGFIKLKKDVKMVLPGDRTELIVELNHPIAIEAGTKFSI-REGG--- 379
Query: 402 RLIGYGIIKE 411
R IG G + E
Sbjct: 380 RTIGAGTVTE 389
>gb|AAC94989.1| (AF038003) elongation factor Tu [Undaria pinnatifida]
Length = 367
Score = 98.7 bits (242), Expect = 1e-19
Identities = 103/382 (26%), Positives = 172/382 (44%), Gaps = 75/382 (19%)
Query: 37 DTHSEELRRGITIKIGFADAEIRRCPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEA 96
D EE RGITI + Y T+ R + +D PGH
Sbjct: 25 DAAPEERARGITINTAHVE-----------YETAS------------RHYAHVDCPGHAD 61
Query: 97 LMTTMLAGASLMDGAILVIAANEPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKA 156
+ M+ GA+ MDGAILV++A + P PQTREH++ + +G +I++ NK + VD +
Sbjct: 62 YVKNMITGAAQMDGAILVVSAADG-PMPQTREHILLSKQVGVPHIVVFLNKEDQVDDLEL 120
Query: 157 LENYR-QIKEFIEG--TVAENAPIIPISALHGAN------------------IDVLVKAI 195
+E +++E + ++ PI+ SAL + I L++++
Sbjct: 121 VELVELEVRELLSNYDFPGDDIPILTGSALQALDAINNEPNLVQGDNKWVDKIYNLMESV 180
Query: 196 EDFIPTPKRDPNKPPKMLVLRSFDVNKPGTPPEKLVGGVLGGSIVQGKLKVGDEIEIRPG 255
+ +IPTP RD +KP M + F + GT V G I +G +KVG+ +++ G
Sbjct: 181 DSYIPTPIRDVDKPFLMAIEDVFSITGRGT--------VATGKIDRGVVKVGETVDL-VG 231
Query: 256 VPYEEHGRIKYEPITTEIVSLQAGGQFVEEAYPGGLVGVGTKLDPYLTKGDLMAGNVVGK 315
+ G K +T + ++ + ++E G VG+ L L KGD+ G V+ K
Sbjct: 232 L-----GDTK----STTVTGVEMFQKTLDEGVAGDNVGI---LLRGLQKGDIERGMVLSK 279
Query: 316 PGKLPPVWDSLRLEVHLLERVVGTEQELKVEPIKRKEVLLLNVGTARTMGLVTGLGKDEI 375
PG + P ++ E+++L + G + P R + V T G + DE
Sbjct: 280 PGTITP-HNTFESELYILTKEEG-GRHTPFFPGYRPQ---FYVRTTDVTGEILSFITDEG 334
Query: 376 EVKLQIPVCAEPGDRVAISRQI 397
E L + PGDRV ++ ++
Sbjct: 335 EKTLMV----MPGDRVKMTAKL 352
>dbj|BAA25893.1| (AB008010) chloroplast EF-Tu [Pyramimonas disomata]
Length = 360
Score = 96.7 bits (237), Expect = 4e-19
Identities = 100/384 (26%), Positives = 165/384 (42%), Gaps = 79/384 (20%)
Query: 37 DTHSEELRRGITIKIGFADAEIRRCPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEA 96
D+ EE RGITI + E R + +D PGH
Sbjct: 24 DSAPEEKARGITINTAHVEYETAN-----------------------RHYAHVDCPGHAD 60
Query: 97 LMTTMLAGASLMDGAILVIAANEPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKA 156
+ M+ GA+ MDGAILV++ + P PQT+EH++ +G NI++ NK + VD +
Sbjct: 61 YVKNMITGAAQMDGAILVVSGADG-PMPQTKEHILLANEVGVPNIVVFLNKQDQVDDAEL 119
Query: 157 LENYR-QIKEFIEG--TVAENAPIIPISAL-------------HGAN-----IDVLVKAI 195
LE +++E + ++ P+ P SAL G N I L+ ++
Sbjct: 120 LELVEMEVRETLSNYEFPGDDIPVCPGSALLALEALTENPKLQKGDNEWVDKIYALMDSV 179
Query: 196 EDFIPTPKRDPNKPPKMLVLRSFDVNKPGTPPEKLVGGVLGGSIVQGKLKVGDEIEIRPG 255
+ +IPTP+R+ +K M V F + GT V G + +G +KVG+ +E+ G
Sbjct: 180 DTYIPTPERETDKAFLMAVEDVFSITGRGT--------VATGRVERGVVKVGETVEL-VG 230
Query: 256 VPYEEHGRIKYEPITTEIVSLQAGGQFVEEAYPGGLVGVGTKLDPYLTKGDLMAGNVVGK 315
+ + T + L+ + +EEA G VG+ L + K D+ G V+ K
Sbjct: 231 LS---------DTRQTTVTGLEMFQKSLEEAMAGDNVGI---LVRGIQKDDIERGMVISK 278
Query: 316 PGKLPP--VWDSLRLEVHLLERVVGTEQELKVEPIKRKEVLLLNVGTARTMGLVTGLGKD 373
PG + P +DS +V++L + G E + + V T G + D
Sbjct: 279 PGTITPHTKFDS---QVYILTKEEGGRHTPFFEGYRPQ----FYVRTTDVTGKIESFRGD 331
Query: 374 EIEVKLQIPVCAEPGDRVAISRQI 397
+ L + PGDR+ + ++
Sbjct: 332 DGSAALMV----MPGDRIKMEVEL 351
>emb|CAA75382.1| (Y15108) translation elongation factor-TU [Glycine max]
Length = 346
Score = 91.7 bits (224), Expect = 1e-17
Identities = 94/365 (25%), Positives = 168/365 (45%), Gaps = 61/365 (16%)
Query: 78 HETEFVRRVSFIDAPGHEALMTTMLAGASLMDGAILVIAANEPCPRPQTREHLMALQIIG 137
+ETE R + +D PGH + M+ GA+ MDGAILV++ + PQT+EH++ + +G
Sbjct: 7 YETEN-RHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGL-MPQTKEHILLAKQVG 64
Query: 138 QKNIIIAQNKIELVDKEKALENYR-QIKEFIEG--TVAENAPIIPISAL----------- 183
NI++ NK + VD E+ L+ +++ + ++ PII SAL
Sbjct: 65 VPNIVVFLNKQDQVDDEELLQLVELEVRSLLSSYEFPGDDVPIISGSALLALEALMANPA 124
Query: 184 --HGAN-----IDVLVKAIEDFIPTPKRDPNKPPKMLVLRSFDVNKPGTPPEKLVGGVLG 236
G N I L+ A++++IP P+R P + + F + GT V
Sbjct: 125 IKRGENQWVDKIYELMDAVDNYIPIPQRQTELPFLLAIEDVFTITGRGT--------VAT 176
Query: 237 GSIVQGKLKVGDEIEIRPGVPYEEHGRIKYEPITTEIVSLQAGGQFVEEAYPGGLVGVGT 296
G + +G ++VG+ ++I GV + T + ++ + ++EA G VG+
Sbjct: 177 GRVERGTIRVGETVDI-VGVK---------DTRNTTVTGVEMFQKILDEALAGDNVGL-- 224
Query: 297 KLDPYLTKGDLMAGNVVGKPGKLPPVWDSLRLEVHLLERVVGTEQE-----------LKV 345
L + K D+ G V+ KPG + P V++L++ G ++
Sbjct: 225 -LLRGIQKTDIQRGMVLAKPGTITP-HTKFSAIVYVLKKEEGGRHSPFFAGYRPQFYMRT 282
Query: 346 EPIKRKEVLLLNVGTARTMGLVTGLGKDEIEVKLQIPVCAEPGDRVAISRQIGSRWRLIG 405
+ K + N + ++ G + ++ V+L +PV E G R AI R+ G + +G
Sbjct: 283 TDVTGKVTAITNDRDEESQMVMPG-XRVKMVVELIVPVACEQGMRFAI-REGG---KTVG 337
Query: 406 YGIIK 410
G+I+
Sbjct: 338 AGVIQ 342
>gi|11498350 GTP-binding protein [Archaeoglobus fulgidus]
>gi|7483313|pir||H69342 GTP-binding protein homolog -
Archaeoglobus fulgidus >gi|2649867|gb|AAB90495.1|
(AE001053) GTP-binding protein [Archaeoglobus fulgidus]
Length = 565
Score = 79.6 bits (193), Expect = 6e-14
Identities = 101/394 (25%), Positives = 162/394 (40%), Gaps = 81/394 (20%)
Query: 3 EKRKSRQAE-VNIGMVGHVDHGKTTLTKAL-----------TGVWTDTHSEELRRGITIK 50
E RK++ E + +G GHVDHGK+TL L T V+ D E+ RG++ +
Sbjct: 149 EIRKTKAKEHILVGTAGHVDHGKSTLVGCLITGKPDDGDGATRVYLDVLKHEIERGLSAE 208
Query: 51 IGFA-----DAEIRRCPNCGRYSTSPVCPYCGHETEFV-----RRVSFIDAPGHEALMTT 100
I FA D ++ R N P E V + VSF+D GHE + T
Sbjct: 209 ISFAVFGYKDGKVLRMKN----------PLSKAEKAMVVETADKLVSFVDTVGHEPWLRT 258
Query: 101 MLAG--ASLMDGAILVIAANEPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALE 158
+ G +D +LV+AAN+ R T+EHL + + +I+A K ++VD + E
Sbjct: 259 TIRGLLGQKVDYGLLVVAANDGVMR-TTKEHL-GIMLAMDLPVIVAVTKADMVDDARLSE 316
Query: 159 NYRQIKEFIEGT-------------------VAENAPIIPISALHGANIDVLVKAIEDFI 199
++I + V N ++P+ ++ E F+
Sbjct: 317 VLQEISATLRRVGRVPTVLKSRHDARKAAEMVKSNKLLVPVVITSAVTLEGYDILEEIFL 376
Query: 200 PTPKR-DPNKPPKMLVLRSFDVNKPGTPPEKLVGGVLGGSIVQGKLKVGDEIEIRPGVPY 258
PKR ++ M + + + V GT V+ GS+ G+L GDE+ I P
Sbjct: 377 HLPKRYTADEDFLMYIDKIYSVTGVGT--------VVSGSVKSGELAEGDEVYIGP---- 424
Query: 259 EEHGRIKYEPITTEIVSLQAGGQFVEEAYPGGLVGVGTKLDPYLTKGDLMAGNVVGKPGK 318
+ G + I S++ ++ A G ++G K Y +L G V+ + K
Sbjct: 425 FQDGSFR----RVRIQSIEMHHYRIDRAKAGDIIGAAVKGVRY---DELRRGMVISR--K 475
Query: 319 LP-PVWD---SLRLEVHLLERVVGTEQELKVEPI 348
P VW+ + + H VG E + VE I
Sbjct: 476 EPRAVWEFDAEIYVFTHPTLISVGYEPVMHVETI 509
>pir||A69025 translation elongation factor, EF-1 alpha related protein -
Methanobacterium thermoautotrophicum (strain Delta H)
>gi|2622293|gb|AAB85674.1| (AE000887) translation
elongation factor, EF-1 alpha related protein
[Methanobacterium thermoautotrophicum]
Length = 529
Score = 71.0 bits (171), Expect = 2e-11
Identities = 96/400 (24%), Positives = 163/400 (40%), Gaps = 75/400 (18%)
Query: 1 MGEKRKSRQAEVNIGMVGHVDHGKTTLTKAL-----------TGVWTDTHSEELRRGITI 49
+ K K+ + + +G+ GHVDHGK+TL L T ++ D E+ RG++
Sbjct: 108 ISRKTKTAREHLLVGVAGHVDHGKSTLLGTLTTGTPDDGSGKTRIFLDVQKHEIERGLSA 167
Query: 50 KI-----GFADAEIRRCPN-CGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLA 103
+ GF D R N R S + E R +SF+D GHE + T +
Sbjct: 168 DLSFAIYGFRDGRPMRLKNPLDRKEKSRLM------DEADRVISFVDTVGHEPWLRTTIR 221
Query: 104 G--ASLMDGAILVIAANEPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALENYR 161
G +D +L +AA+E P TREHL + I + +I+ K ++ E
Sbjct: 222 GIVGQKLDYGLLTVAADEG-PTHITREHL-GIMIAMELPVIVVLTKCDMAADENRRGVRE 279
Query: 162 QIKEF-------------------IEGTVAEN-APIIPISALHGANIDVLVKAIEDFIPT 201
+I E I G + ++ PII S++ G +++L + +
Sbjct: 280 KISELLKLVGRIPFHVKSLDAAAGIAGKMNQHIVPIIETSSVTGEGLEILDELFLNL--R 337
Query: 202 PKRDPN---KPPKMLVLRSFDVNKPGTPPEKLVGGVLGGSIVQGKLKVGDEIEIRPGVPY 258
+RD N +P M + + + + GT V+ G+I QG ++ GD + + P
Sbjct: 338 VRRDVNGDEEPFLMYIDKIYSIRGVGT--------VVSGTIQQGLVRKGDTLLLGP---- 385
Query: 259 EEHGRIKYEPITTEIVSLQAGGQFVEEAYPGGLVGVGTKLDPYLTKGDLMAGNVVGKPGK 318
+ G K+ +T + S++ + A PG +VG+ + ++ G ++ P
Sbjct: 386 LKTG--KFREVT--VKSIEMHHYRIGCAEPGHIVGISIS---GASPDEIERGMILAHPDY 438
Query: 319 LPPVWDSLRLEVHLLER----VVGTEQELKVEPIKRKEVL 354
P EV +L G E +E I VL
Sbjct: 439 DPEAVREFEAEVAILVHPTTIKAGYESVTHIETIAETTVL 478
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.318 0.140 0.409
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 160798165
Number of Sequences: 2977
Number of extensions: 7143722
Number of successful extensions: 25099
Number of sequences better than 1.0e-10: 1048
Number of HSP's better than 0.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 1016
Number of HSP's that attempted gapping in prelim test: 22263
Number of HSP's gapped (non-prelim): 1183
length of query: 411
length of database: 189,106,746
effective HSP length: 55
effective length of query: 356
effective length of database: 156,189,961
effective search space: 55603626116
effective search space used: 55603626116
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.6 bits)
S2: 166 (69.1 bits)