BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB2047 (trpF) DE:phosphoribosyl anthranilate isomerase (trpF)
(208 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||G75162 phosphoribosyl anthranilate isomerase (trpf) PAB2047... 407 e-113
sp|Q9YGB1|TRPF_PYRKO N-(5'-PHOSPHORIBOSYL)ANTHRANILATE ISOMERASE... 256 2e-67
gi|11499194 phosphoribosyl anthranilate isomerase (trpF) [Archae... 203 2e-51
sp|O67853|TRPF_AQUAE N-(5'-PHOSPHORIBOSYL)ANTHRANILATE ISOMERASE... 94 2e-18
sp|P52563|TRPF_HALVO N-(5'-PHOSPHORIBOSYL)ANTHRANILATE ISOMERASE... 92 6e-18
sp|Q56320|TRPF_THEMA N-(5'-PHOSPHORIBOSYL)ANTHRANILATE ISOMERASE... 91 1e-17
pdb|1DL3|A Chain A, Crystal Structure Of Mutually Generated Mono... 89 3e-17
sp|Q57893|TRPF_METJA N-(5'-PHOSPHORIBOSYL)ANTHRANILATE ISOMERASE... 86 3e-16
sp|P20409|TRPG_PHYBL ANTHRANILATE SYNTHASE COMPONENT II [INCLUDE... 85 8e-16
gb|AAA33633.1| (M23177) trifunctional protein with glutamine ami... 85 8e-16
gb|AAG19903.1| (AE005074) phosphoribosylanthranilate isomerase; ... 82 4e-15
sp|P17218|TRPF_LACCA N-(5'-PHOSPHORIBOSYL)ANTHRANILATE ISOMERASE... 80 3e-14
sp|P00908|TRPG_NEUCR ANTHRANILATE SYNTHASE COMPONENT II [INCLUDE... 76 3e-13
gi|6320210 n-(5'-phosphoribosyl)-anthranilate isomerase; Trp1p [... 74 1e-12
gb|AAA72099.1| (M74016) putative. start [Cloning vector pYADE4] ... 74 1e-12
gb|AAA87582.1| (U46126) chloramphenicol resistance protein [synt... 74 1e-12
sp|P13997|TRPF_KLULA N-(5'-PHOSPHORIBOSYL)ANTHRANILATE ISOMERASE... 73 2e-12
sp|P00912|TRPF_YEAST N-(5'-PHOSPHORIBOSYL)ANTHRANILATE ISOMERASE... 73 3e-12
sp|P24920|TRPC_PHYPR TRYPTOPHAN BIOSYNTHESIS PROTEIN TRP1 [INCLU... 71 1e-11
sp|Q59649|TRPF_PSEAE N-(5'-PHOSPHORIBOSYL)ANTHRANILATE ISOMERASE... 69 3e-11
sp|P16923|TRPF_ACICA N-(5'-PHOSPHORIBOSYL)ANTHRANILATE ISOMERASE... 69 4e-11
>pir||G75162 phosphoribosyl anthranilate isomerase (trpf) PAB2047 - Pyrococcus
abyssi (strain Orsay) >gi|5457892|emb|CAB49382.1|
(AJ248284) phosphoribosyl anthranilate isomerase (trpF)
[Pyrococcus abyssi]
Length = 208
Score = 407 bits (1034), Expect = e-113
Identities = 208/208 (100%), Positives = 208/208 (100%)
Query: 1 MFVKVCGVKSLEELEIVEKYADATGVVVNSKSKRNVPLDAAREIISSAKIPVFLVSTMKN 60
MFVKVCGVKSLEELEIVEKYADATGVVVNSKSKRNVPLDAAREIISSAKIPVFLVSTMKN
Sbjct: 1 MFVKVCGVKSLEELEIVEKYADATGVVVNSKSKRNVPLDAAREIISSAKIPVFLVSTMKN 60
Query: 61 REDWEVAIERTEARYIQIHSDVEPSLLPYLKDEYGVEIMKAFRVPQESENPERDAQMLLK 120
REDWEVAIERTEARYIQIHSDVEPSLLPYLKDEYGVEIMKAFRVPQESENPERDAQMLLK
Sbjct: 61 REDWEVAIERTEARYIQIHSDVEPSLLPYLKDEYGVEIMKAFRVPQESENPERDAQMLLK 120
Query: 121 KIRKYEADLILLDTGAGSGKMHDLRVTRIVAEEIPVVVAGGLKPENVEMVIKLVKPFGVD 180
KIRKYEADLILLDTGAGSGKMHDLRVTRIVAEEIPVVVAGGLKPENVEMVIKLVKPFGVD
Sbjct: 121 KIRKYEADLILLDTGAGSGKMHDLRVTRIVAEEIPVVVAGGLKPENVEMVIKLVKPFGVD 180
Query: 181 VSSGVERNGKKDEELVREFVRRAKNVVR 208
VSSGVERNGKKDEELVREFVRRAKNVVR
Sbjct: 181 VSSGVERNGKKDEELVREFVRRAKNVVR 208
>sp|Q9YGB1|TRPF_PYRKO N-(5'-PHOSPHORIBOSYL)ANTHRANILATE ISOMERASE (PRAI)
>gi|11268651|pir||T43926 phosphoribosylanthranilate
isomerase (EC 5.3.1.24) [imported] - Pyrococcus
kodakaraensis >gi|5545308|dbj|BAA82549.1| (AB030011)
phosphoribosyl anthranilate isomerase [Thermococcus
kodakaraensis]
Length = 208
Score = 256 bits (646), Expect = 2e-67
Identities = 123/204 (60%), Positives = 157/204 (76%)
Query: 2 FVKVCGVKSLEELEIVEKYADATGVVVNSKSKRNVPLDAAREIISSAKIPVFLVSTMKNR 61
FVK+CGVK+++EL +VE+YADATGVVVNS+SKR VPL A E+I A+IP++LVSTMK
Sbjct: 4 FVKICGVKTMDELRLVERYADATGVVVNSRSKRKVPLKTAAELIEMAEIPIYLVSTMKTF 63
Query: 62 EDWEVAIERTEARYIQIHSDVEPSLLPYLKDEYGVEIMKAFRVPQESENPERDAQMLLKK 121
+W A+E+T A YIQ+HSD+ P + LKDEYGV +MKAF VP+ES++P DA+ LL+
Sbjct: 64 PEWANAVEKTGAEYIQVHSDMHPKAVNRLKDEYGVSVMKAFMVPRESDDPAEDAERLLEL 123
Query: 122 IRKYEADLILLDTGAGSGKMHDLRVTRIVAEEIPVVVAGGLKPENVEMVIKLVKPFGVDV 181
I +YE D ILLDTG GSG+ HD RV+ I+A+E P+V+AGGL PENV I+ VKP GVDV
Sbjct: 124 IGQYEVDKILLDTGVGSGRRHDYRVSAIIAKEYPIVLAGGLTPENVGEAIRWVKPAGVDV 183
Query: 182 SSGVERNGKKDEELVREFVRRAKN 205
SSGVERNG KD L+ F+ +N
Sbjct: 184 SSGVERNGVKDRVLIEAFMAVVRN 207
>gi|11499194 phosphoribosyl anthranilate isomerase (trpF) [Archaeoglobus
fulgidus] >gi|3334395|sp|O28671|TRPF_ARCFU
N-(5'-PHOSPHORIBOSYL)ANTHRANILATE ISOMERASE (PRAI)
>gi|7436788|pir||H69449 phosphoribosyl anthranilate
isomerase (trpF) homolog - Archaeoglobus fulgidus
>gi|2648959|gb|AAB89648.1| (AE000992) phosphoribosyl
anthranilate isomerase (trpF) [Archaeoglobus fulgidus]
Length = 199
Score = 203 bits (510), Expect = 2e-51
Identities = 113/208 (54%), Positives = 140/208 (66%), Gaps = 9/208 (4%)
Query: 1 MFVKVCGVKSLEELEIVEKYADATGVVVNSKSKRNVPLDAAREIISSAKIPVFLVSTMKN 60
M VKVCGVKSL+EL+ VE+YAD TGVVV S SKR V LD A+E+I S+ IPVF VST +
Sbjct: 1 MMVKVCGVKSLKELDAVERYADFTGVVVKSDSKRCVELDVAKELIGSSSIPVFAVSTASS 60
Query: 61 REDWEVAIERTEARYIQIHSDVEPSLLPYLKDEYGVEIMKAFRVPQESENPERDAQMLLK 120
+WE + +TE + Q+HS++ LK E V++MKAF V E A+ +
Sbjct: 61 YAEWEEILAKTECSFAQVHSEMPLEDFERLKAE--VKVMKAFIV-------EGPAEKIAA 111
Query: 121 KIRKYEADLILLDTGAGSGKMHDLRVTRIVAEEIPVVVAGGLKPENVEMVIKLVKPFGVD 180
KI Y LILLD+G GSGK HD V++ +AE V +AGGL +NV I+ V+P GVD
Sbjct: 112 KIELYSPHLILLDSGCGSGKTHDWNVSKALAERYGVFLAGGLNLDNVREAIRFVRPMGVD 171
Query: 181 VSSGVERNGKKDEELVREFVRRAKNVVR 208
VSSGVER+G KDE LVREFVRRAKN VR
Sbjct: 172 VSSGVERDGLKDEMLVREFVRRAKNEVR 199
>sp|O67853|TRPF_AQUAE N-(5'-PHOSPHORIBOSYL)ANTHRANILATE ISOMERASE (PRAI)
>gi|7436783|pir||A70478 phosphoribosylanthranilate
isomerase (EC 5.3.1.24) - Aquifex aeolicus
>gi|2984287|gb|AAC07811.1| (AE000771) phosphoribosyl
anthranilate isomerase [Aquifex aeolicus]
Length = 204
Score = 93.6 bits (229), Expect = 2e-18
Identities = 78/216 (36%), Positives = 121/216 (55%), Gaps = 29/216 (13%)
Query: 3 VKVCGVKSLEE-LEIVEKYADATGVVVNSKSKRNVPLDAAREIISSAK-IPVFLVSTMKN 60
VK+CG+ +LE+ L ++ AD GV+ KS R + EII + + + V V+ + N
Sbjct: 4 VKICGITNLEDALFCAKEGADYIGVITYPKSPRYTSKEKRLEIIKALEGLNVKKVAVVVN 63
Query: 61 REDWEVAIERTEARY--IQIHSDVEPSLLPYLKDEYGVE-IMKAFRVPQESENPERDAQM 117
E +E E + + IQ+H D + L G++ ++K FRV +E
Sbjct: 64 -EPYEFIKELLDEGFDLIQLHGDEDIEL----GKRVGLDKVIKVFRVKEE---------- 108
Query: 118 LLKKIRKYE-ADLILLDTGA-----GSGKMHDLRVTRIVAEE-IPVVVAGGLKPENVEMV 170
+ K+ ++E A ILLDT + G+GK + + + + EE V ++GGL PENV+
Sbjct: 109 -IPKVGEWEKAYAILLDTFSKEAYGGTGKTFNWEIAKKLVEEGHKVFLSGGLNPENVKEG 167
Query: 171 IKLVKPFGVDVSSGVER-NGKKDEELVREFVRRAKN 205
I+ VKP+GVDVSSGVE+ GKKD + VREF++R K+
Sbjct: 168 IEFVKPYGVDVSSGVEKEKGKKDFKKVREFIKRTKS 203
>sp|P52563|TRPF_HALVO N-(5'-PHOSPHORIBOSYL)ANTHRANILATE ISOMERASE (PRAI)
>gi|149038|gb|AAA73176.1| (M83788) N-phosphoribosyl
anthranilate isomerase [Haloferax volcanii]
Length = 221
Score = 91.7 bits (224), Expect = 6e-18
Identities = 76/214 (35%), Positives = 112/214 (51%), Gaps = 22/214 (10%)
Query: 3 VKVCGVKSLEELEIVEKY-ADATGVV--VNSKSKRNVPLDAAREIISSAKIPVFLVSTMK 59
VKVCGV +L V+ ADA G + V + R +P + ARE+ ++A P FL +T+
Sbjct: 4 VKVCGVTDETDLAAVDAAGADAVGAICDVPVDTPREIPRERARELFAAA--PPFLTTTLV 61
Query: 60 NREDWEVAIERTEARYIQIHSDVEPSLLPYLKDEYGVEIMKAFRVPQESENPERDAQMLL 119
D V R AR +V P +L L ++ + + + R P DA L
Sbjct: 62 TMPD-SVDHARDLAR------EVGPDVLQ-LHGDFAADDLDSLRATGVGVVPVVDATDLA 113
Query: 120 K-KIRKYEADLILLDT-----GAGSGKMHDLRVTR--IVAEEIPVVVAGGLKPENVEMVI 171
+ + D IL+DT G+G+ HD +R + A + PV++AGGL P+NV +
Sbjct: 114 RARDLAPVVDAILVDTPSDSGAGGTGETHDWDASRDLVAAVDAPVILAGGLTPDNVVEAV 173
Query: 172 KLVKPFGVDVSSGVERN-GKKDEELVREFVRRAK 204
+ V+P+GVDV+SGVE + G KD + VR FV AK
Sbjct: 174 RTVEPYGVDVASGVEASGGVKDHDAVRAFVAAAK 207
>sp|Q56320|TRPF_THEMA N-(5'-PHOSPHORIBOSYL)ANTHRANILATE ISOMERASE (PRAI)
>gi|2120368|pir||S59048 phosphoribosylanthranilate
isomerase (EC 5.3.1.24) trpF [validated] - Thermotoga
maritima (strain MSB8) >gi|1941978|pdb|1NSJ| Crystal
Structure Of Phosphoribosyl Anthranilate Isomerase From
Thermotoga Maritima >gi|1054860|emb|CAA63390.1| (X92729)
phosphoribosyl anthranilate isomerase [Thermotoga
maritima] >gi|4980631|gb|AAD35232.1|AE001699_9
(AE001699) phosphoribosylanthranilate isomerase
[Thermotoga maritima]
Length = 205
Score = 90.9 bits (222), Expect = 1e-17
Identities = 73/215 (33%), Positives = 109/215 (49%), Gaps = 24/215 (11%)
Query: 3 VKVCGVKSLEE-LEIVEKYADATGVVVNSKSKRNVPLDAAREIISSAKIP--VFLVSTMK 59
VK+CG+ +LE+ L VE ADA G V KSKR + + AR I S ++P VF V
Sbjct: 4 VKICGITNLEDALFSVESGADAVGFVFYPKSKRYISPEDARRI--SVELPPFVFRVGVFV 61
Query: 60 NREDWEV--AIERTEARYIQIHSDVEPSLLPYLKDEYGVEIMKAFRVPQESENPERDAQM 117
N E ++ + +Q+H + L + + + ++KA V E +
Sbjct: 62 NEEPEKILDVASYVQLNAVQLHGEEPIELCRKIAER--ILVIKAVGVSNERD-------- 111
Query: 118 LLKKIRKYEADLILLDTGA----GSGKMHDLRVTRIVAEEIP-VVVAGGLKPENVEMVIK 172
+++ Y ILLDT GSGK D + + +V++GGL PENV I
Sbjct: 112 -MERALNYREFPILLDTKTPEYGGSGKTFDWSLILPYRDRFRYLVLSGGLNPENVRSAID 170
Query: 173 LVKPFGVDVSSGVER-NGKKDEELVREFVRRAKNV 206
+V+PF VDVSSGVE GKKD + ++ F++ AK +
Sbjct: 171 VVRPFAVDVSSGVEAFPGKKDHDSIKMFIKNAKGL 205
>pdb|1DL3|A Chain A, Crystal Structure Of Mutually Generated Monomers Of
Dimeric Phosphoribosylantranilate Isomerase From
Thermotoga Maritim >gi|8569670|pdb|1DL3|B Chain B,
Crystal Structure Of Mutually Generated Monomers Of
Dimeric Phosphoribosylantranilate Isomerase From
Thermotoga Maritim
Length = 203
Score = 89.3 bits (218), Expect = 3e-17
Identities = 71/213 (33%), Positives = 106/213 (49%), Gaps = 22/213 (10%)
Query: 3 VKVCGVKSLEE-LEIVEKYADATGVVVNSKSKRNVPLDAAREIISSAKIPVFLVSTMKNR 61
VK+CG+ +LE+ L VE AD G V KSKR + + AR I S ++PV V N
Sbjct: 4 VKICGITNLEDALFSVESGADYVGFVFYPKSKRYISPEDARRI--SVELPVERVGVFVNE 61
Query: 62 EDWEV--AIERTEARYIQIHSDVEPSLLPYLKDEYGVEIMKAFRVPQESENPERDAQMLL 119
E ++ + +Q+H + L + + + + KA V E + +
Sbjct: 62 EPEKILDVASYVQLNAVQLHGEEPIELCRKIAER--ILVWKAVGVSNERD---------M 110
Query: 120 KKIRKYEADLILLDTGA----GSGKMHDLRVTRIVAEEIP-VVVAGGLKPENVEMVIKLV 174
++ Y ILLDT GSGK D + + +V++GGL PENV I +V
Sbjct: 111 ERALNYREFPILLDTKTPEYGGSGKTFDWSLILPYRDRFRYLVLSGGLNPENVRSAIDVV 170
Query: 175 KPFGVDVSSGVER-NGKKDEELVREFVRRAKNV 206
+PF VDVSSGVE GKKD + ++ F++ AK +
Sbjct: 171 RPFAVDVSSGVEAFPGKKDHDSIKMFIKNAKGL 203
>sp|Q57893|TRPF_METJA N-(5'-PHOSPHORIBOSYL)ANTHRANILATE ISOMERASE (PRAI)
>gi|2129198|pir||C64356 phosphoribosylanthranilate
isomerase (EC 5.3.1.24) - Methanococcus jannaschii
>gi|1591155|gb|AAB98440.1| (U67496)
phosphoribosylanthranilate isomerase (trpF)
[Methanococcus jannaschii]
Length = 226
Score = 86.2 bits (210), Expect = 3e-16
Identities = 70/222 (31%), Positives = 109/222 (48%), Gaps = 21/222 (9%)
Query: 3 VKVCGVKSLEELEIVEKYADATGVVVNS--KSKRNVPLDAAREIISSAKIPVFLVSTMKN 60
VK+CG+ + E++ + K A GV+V+ K+ R + LD A E+ LV+ +
Sbjct: 8 VKICGITNEEDIAYISKKVHAVGVIVDVPVKTPRKISLDKAIELKKYVAPFTSLVTVLMP 67
Query: 61 REDWEVA--IERTEARYIQIHSDVEPSLLPYLKD-----EYGVEIMKAFRVPQESENPER 113
EV + IQ+H + L E I+K +P++ E
Sbjct: 68 NSIEEVLEIYNALKPNAIQLHGFESLDFVKELNKLKNTGELNAHIIKVIHIPKDEEI--- 124
Query: 114 DAQMLLKKIRKYE--ADLILLDTGAGS----GKMHDLRVTRIVAEEI--PVVVAGGLKPE 165
D + LL ++YE + IL+DT S GK H+ V++ + E + P+++AGGL +
Sbjct: 125 DFKTLLNTAKEYEKYVEAILVDTKIESIKLEGKTHNWAVSKKLRESLEKPLILAGGLNKD 184
Query: 166 NVEMVIKLVKPFGVDVSSGVER-NGKKDEELVREFVRRAKNV 206
NV IK VKP+ +DVSS +E GKKD + V EF+ K V
Sbjct: 185 NVLEAIKTVKPYAIDVSSSLEAYGGKKDLKKVDEFLEVIKKV 226
>sp|P20409|TRPG_PHYBL ANTHRANILATE SYNTHASE COMPONENT II [INCLUDES: GLUTAMINE
AMIDOTRANSFERASE; INDOLE-3-GLYCEROL PHOSPHATE SYNTHASE
(IGPS); N-(5'-PHOSPHORIBOSYL)ANTHRANILATE ISOMERASE
(PRAI)] >gi|82774|pir||JT0383 anthranilate synthase (EC
4.1.3.27) component II - Phycomyces blakesleeanus
Length = 765
Score = 84.7 bits (206), Expect = 8e-16
Identities = 71/258 (27%), Positives = 114/258 (43%), Gaps = 62/258 (24%)
Query: 3 VKVCGVKSLEE-LEIVEKYADATGVVVNSKSKRNVPLDAAREIISSA-KIPV----FLVS 56
VK+CG+ S+E +E AD G++ KSKR V + AREI+ + K+P V
Sbjct: 513 VKICGISSVEAAVEAATAGADLVGLIFAEKSKRQVTVAKAREIVDALHKLPTRSSQLPVK 572
Query: 57 TMKNREDWEVAIERTEARY-----------------------------IQIHSDVEPSLL 87
+ K+ + ++V E E R IQ+H +
Sbjct: 573 SQKSIDWFDVQTEMVEQRVPWRPLVVGVFVNQSIEYMSQVAVEAGLDLIQLHGTESAEIA 632
Query: 88 PYLKDEYGVEIMKAFRVPQES---------ENPERDAQMLLKKIRKYEADLILLDTGAGS 138
+L V ++KAF + S P + +LL + + +D G
Sbjct: 633 RFLP----VPVIKAFHMDASSFHAGQIPYVTQPGNNQLLLLDA----KVPSLPMDRQGGL 684
Query: 139 GKMHDLRVTRIVA----------EEIPVVVAGGLKPENVEMVIKLVKPFGVDVSSGVERN 188
G+ D + + + + PV++AGGL P N+ I+ V+P+ VDVSSGVE +
Sbjct: 685 GQKFDWTIAQDIVNVKRPGCSKEQTFPVILAGGLDPSNISEAIQQVRPWAVDVSSGVETD 744
Query: 189 GKKDEELVREFVRRAKNV 206
GKKD + +R FV +AK++
Sbjct: 745 GKKDLKKIRAFVEKAKSI 762
>gb|AAA33633.1| (M23177) trifunctional protein with glutamine amidotransferase
(TrpG), phosphoribosylanthranilate isomerase (TrpF), and
indoleglycerolphosphate synthetase (TrpC) activities
[Phycomyces blakesleeanus]
Length = 765
Score = 84.7 bits (206), Expect = 8e-16
Identities = 71/258 (27%), Positives = 114/258 (43%), Gaps = 62/258 (24%)
Query: 3 VKVCGVKSLEE-LEIVEKYADATGVVVNSKSKRNVPLDAAREIISSA-KIPV----FLVS 56
VK+CG+ S+E +E AD G++ KSKR V + AREI+ + K+P V
Sbjct: 513 VKICGISSVEAAVEAATAGADLVGLIFAEKSKRQVTVAKAREIVDALHKLPTRSSQLPVK 572
Query: 57 TMKNREDWEVAIERTEARY-----------------------------IQIHSDVEPSLL 87
+ K+ + ++V E E R IQ+H +
Sbjct: 573 SQKSIDWFDVQTEMVEQRVPWRPLVVGVFVNQSTEYMSQVAVEAALDLIQLHGTESAEIA 632
Query: 88 PYLKDEYGVEIMKAFRVPQES---------ENPERDAQMLLKKIRKYEADLILLDTGAGS 138
+L V ++KAF + S P + +LL + + +D G
Sbjct: 633 RFLP----VPVIKAFHMDASSFHAGQIPYVTQPGNNQLLLLDA----KVPSLPMDRQGGL 684
Query: 139 GKMHDLRVTRIVA----------EEIPVVVAGGLKPENVEMVIKLVKPFGVDVSSGVERN 188
G+ D + + + + PV++AGGL P N+ I+ V+P+ VDVSSGVE +
Sbjct: 685 GQKFDWTIAQDIVNVKRPGCSKEQTFPVILAGGLDPSNISEAIQQVRPWAVDVSSGVETD 744
Query: 189 GKKDEELVREFVRRAKNV 206
GKKD + +R FV +AK++
Sbjct: 745 GKKDLKKIRAFVEKAKSI 762
>gb|AAG19903.1| (AE005074) phosphoribosylanthranilate isomerase; TrpF
[Halobacterium sp. NRC-1]
Length = 218
Score = 82.3 bits (200), Expect = 4e-15
Identities = 72/223 (32%), Positives = 102/223 (45%), Gaps = 39/223 (17%)
Query: 3 VKVCGVKS-LEELEIVEKYADATGVVVNSKSKRNVPLDAAREIISS------AKIPVFLV 55
VKVCG+ + + V ADA G++ + VP++ RE+ A P F+
Sbjct: 4 VKVCGLTTERDHAAAVAAGADAVGIIAD------VPVETPREVSVETATALRAATPPFVT 57
Query: 56 S---TMKNREDWEVAIERTEAR-YIQIHSDVEPSLLPYLKDEYGVEIMKAFRVPQESENP 111
S TM + V + RT A +Q+H D+ Y+ ++KA +S
Sbjct: 58 SVLVTMPATPEHAVDLVRTVAPDAVQLHGDLPVGDAAYVAANTPCPVIKAVTAGDQSAAR 117
Query: 112 ERDAQMLLKKIRKYEADLILLDT--------GAGSGKMHDLRVTRIVAEEI--PVVVAGG 161
D D +L+D+ G G+G+ HD TR A+ + PVV+AGG
Sbjct: 118 YADV-----------VDALLVDSPPTDDAGAGGGTGRTHDWAATRAFADRVDTPVVLAGG 166
Query: 162 LKPENVEMVIKLVKPFGVDVSSGVE-RNGKKDEELVREFVRRA 203
L P NV + V PF VDV+SGVE R G+KD V FV RA
Sbjct: 167 LTPANVADAVDTVDPFAVDVASGVEARPGEKDHAAVSAFVARA 209
>sp|P17218|TRPF_LACCA N-(5'-PHOSPHORIBOSYL)ANTHRANILATE ISOMERASE (PRAI)
>gi|80562|pir||JS0342 phosphoribosylanthranilate
isomerase (EC 5.3.1.24) - Lactobacillus casei
>gi|216758|dbj|BAA00385.1| (D00496) trpF protein
[Lactobacillus casei]
Length = 199
Score = 79.6 bits (193), Expect = 3e-14
Identities = 63/207 (30%), Positives = 108/207 (51%), Gaps = 21/207 (10%)
Query: 1 MFVKVCGVKSLEELEIVEKY-ADATGVVVNSKSKRNVPLDAAREIISSAKIPVFLVSTMK 59
+ VK+CG+ E++ V AD G V + + V L+ A + + V
Sbjct: 2 VLVKICGLMHSEDILAVNTAGADFAGFVF-APGRHQVSLEQALALNQLLHSKIKTVGVFV 60
Query: 60 NREDWEV-AIERTEARYI-QIHSDVEPSLLPYLKDEYGVEIMKAFRVPQESENPERDAQM 117
N E+ AI + A + Q+H P+ + L+ + G+++++ F ER A
Sbjct: 61 NEPVAEILAIYQAGAIDVAQLHGKSTPAEITQLQ-QAGLKVIQVF---------ERQAID 110
Query: 118 LLKKIRKYEADLILLDTGAGSGKMHDLRVTRIVAEEIPVVVAGGLKPENVEMVIKLVKPF 177
L AD +++D+G GSG++ +L+ ++ P+++AGGL P NV ++LV+P
Sbjct: 111 LTSM-----ADYLMVDSGKGSGQLLNLKAIPHISR--PLILAGGLTPLNVRQAVQLVQPT 163
Query: 178 GVDVSSGVERNGKKDEELVREFVRRAK 204
VDVSSGVE NG KD + + +F+++AK
Sbjct: 164 MVDVSSGVETNGHKDADKITQFIQQAK 190
>sp|P00908|TRPG_NEUCR ANTHRANILATE SYNTHASE COMPONENT II [INCLUDES: GLUTAMINE
AMIDOTRANSFERASE; INDOLE-3-GLYCEROL PHOSPHATE SYNTHASE
(IGPS); N-(5'-PHOSPHORIBOSYL)ANTHRANILATE ISOMERASE
(PRAI)] >gi|68271|pir||NNNC2 anthranilate synthase (EC
4.1.3.27) component II - Neurospora crassa
Length = 762
Score = 76.1 bits (184), Expect = 3e-13
Identities = 68/239 (28%), Positives = 117/239 (48%), Gaps = 40/239 (16%)
Query: 1 MFVKVCGVKSLEEL-EIVEKYADATGVVVNSKSKRNVPLDAAREIISSAKIPVFLVSTMK 59
+ VK+CG +S E E ++ AD G+++ +KR V + A I + V K
Sbjct: 530 LLVKICGTRSAEAAAEAIKAGADLVGMIMVPGTKRCVDHETALSISQA-------VHMSK 582
Query: 60 NREDWEVAIERTEAR--YIQIHSDV----EPSLLPYLKDEYGVEIMKAFR------VPQE 107
EV+ + +++ + I++++ P L+ ++ E+++ V
Sbjct: 583 KTGSTEVSSQASKSARDFFNINAEIIRKRGPLLVGVFMNQPLEEVLEKQHLYDLDIVQLH 642
Query: 108 SENPERDAQML-LKKIRKYEADLI-----------LLDTGAGSGKMHDLRVTRIVAE--- 152
+ P A ++ + +RK++ + LLD+GAGSG + DL + E
Sbjct: 643 GDEPLEWANLIPVPVVRKFKPGQVGLATRGYHAVPLLDSGAGSGTLLDLESVKKELEKDE 702
Query: 153 EIPVVVAGGLKPENVEMVIKLVKPF-----GVDVSSGVERNGKKDEELVREFVRRAKNV 206
++ V++AGGL+P NV +K + P GVDVSSGVE GK+ E +REFV+ AK+V
Sbjct: 703 QVTVLLAGGLEPSNVVETVKSLGPLSERVIGVDVSSGVEEGGKQSLEKIREFVKAAKSV 761
>gi|6320210 n-(5'-phosphoribosyl)-anthranilate isomerase; Trp1p [Saccharomyces
cerevisiae] >gi|4668|emb|CAA24634.1| (V01341) trp1
[Saccharomyces cerevisiae] >gi|173017|gb|AAA72097.1|
(M74015) putative [Cloning vector pYSVE2]
>gi|173040|gb|AAA88758.1| (J01374)
N-(5'-phosphoribosyl)-anthranilate isomerase
[Saccharomyces cerevisiae] >gi|408372|gb|AAA67143.1|
(U01086) N-(5'phosphoribosyl)anthranilate isomerase
(TRP1) [synthetic construct] >gi|988209|gb|AAA96381.1|
(U30497) TRP1 gene product [Cloning vector pAS2-1]
>gi|1052965|gb|AAA80670.1| (U37456)
N-(5'-phosphoribosyl)-anthranilate isomerase [Cloning
vector YITAG100] >gi|1236520|gb|AAA92918.1| (U46855)
TRP1 [Cloning vector pAS1-tet]
>gi|1373272|gb|AAB02233.1| (U57443) Trp1p [Cloning
vector pODB8] >gi|1595817|gb|AAB49941.1| (U70018) TRP1
[Cloning vector pGBD-C1] >gi|1595821|gb|AAB49944.1|
(U70019) TRP1 [Cloning vector pGBD-C2]
>gi|1595825|gb|AAB49947.1| (U70020) TRP1 [Cloning vector
pGBD-C3] >gi|2267563|gb|AAB63578.1| (AF008932) TRP1
[DNA-binding vector pODB80] >gi|3243019|gb|AAC23874.1|
(AF069720) phosphoribosylanthranilate isomerase
[Expression vector pBEVY-GT] >gi|3243028|gb|AAC23880.1|
(AF069723) phosphoribosylanthranilate isomerase
[Expression vector pBEVY-T] >gi|6318569|gb|AAF06952.1|
(AF134781) N-(5'-phosphoribosyl)-anthranilate isomerase
[Cloning vector YEP46] >gi|6642843|gb|AAF20320.1|
(AF134165) n-(5'-phosphoribosyl)-anthranilate isomerase
[Yeast 2-hybrid vector pCD.1] >gi|6642846|gb|AAF20322.1|
(AF134166) n-(5'-phosphoribosyl)-anthranilate isomerase
[Yeast 2-hybrid vector pCD.2]
>gi|11344896|gb|AAG34533.1| (AF298789)
phosphoribosylanthranilate isomerase [recombinase
expression vector pSH63]
Length = 224
Score = 73.7 bits (178), Expect = 1e-12
Identities = 67/220 (30%), Positives = 101/220 (45%), Gaps = 28/220 (12%)
Query: 3 VKVCGVKSLEELEI-VEKYADATGVVVNSKSKRNVPLDAAREIISSAKI-------PVFL 54
VKVCG++S E E ++ AD G++ KR + AR+I S K P +L
Sbjct: 14 VKVCGLQSTEAAECALDSDADLLGIICVPNRKRTIDPVIARKISSLVKAYKNSSGTPKYL 73
Query: 55 VSTMKN--REDWEVAIERTEARYIQIHSDVEPSLLPYLKDEYGVEIMKAFRVPQESENPE 112
V +N +ED + +Q+H D S Y ++ G+ ++K P
Sbjct: 74 VGVFRNQPKEDVLALVNDYGIDIVQLHGD--ESWQEY-QEFLGLPVIKRLVFP------- 123
Query: 113 RDAQMLLKKI-RKYEADLILLDTGAGS-------GKMHDLRVTRIVAEEIPVVVAGGLKP 164
+D +LL +K + + L D+ AG + D + E + ++AGGL P
Sbjct: 124 KDCNILLSAASQKPHSFIPLFDSEAGGTGELLDWNSISDWVGRQESPESLHFMLAGGLTP 183
Query: 165 ENVEMVIKLVKPFGVDVSSGVERNGKKDEELVREFVRRAK 204
ENV ++L GVDVS GVE NG KD + FV+ AK
Sbjct: 184 ENVGDALRLNGVIGVDVSGGVETNGVKDSNKIANFVKNAK 223
>gb|AAA72099.1| (M74016) putative. start [Cloning vector pYADE4]
>gi|1049260|gb|AAA80350.1| (U36451)
N-(5'phosphoribosyl)anthranilate isomerase [Shuttle
vector pBD-GAL4] >gi|1052967|gb|AAA80671.1| (U37457)
N-(5'-phosphoribosyl)-anthranilate isomerase [Cloning
vector YATAG200] >gi|1052971|gb|AAA80674.1| (U37458)
N-(5'-phosphoribosyl)-anthranilate isomerase [Cloning
vector YRTAG300]
Length = 233
Score = 73.7 bits (178), Expect = 1e-12
Identities = 67/220 (30%), Positives = 101/220 (45%), Gaps = 28/220 (12%)
Query: 3 VKVCGVKSLEELEI-VEKYADATGVVVNSKSKRNVPLDAAREIISSAKI-------PVFL 54
VKVCG++S E E ++ AD G++ KR + AR+I S K P +L
Sbjct: 23 VKVCGLQSTEAAECALDSDADLLGIICVPNRKRTIDPVIARKISSLVKAYKNSSGTPKYL 82
Query: 55 VSTMKN--REDWEVAIERTEARYIQIHSDVEPSLLPYLKDEYGVEIMKAFRVPQESENPE 112
V +N +ED + +Q+H D S Y ++ G+ ++K P
Sbjct: 83 VGVFRNQPKEDVLALVNDYGIDIVQLHGD--ESWQEY-QEFLGLPVIKRLVFP------- 132
Query: 113 RDAQMLLKKI-RKYEADLILLDTGAGS-------GKMHDLRVTRIVAEEIPVVVAGGLKP 164
+D +LL +K + + L D+ AG + D + E + ++AGGL P
Sbjct: 133 KDCNILLSAASQKPHSFIPLFDSEAGGTGELLDWNSISDWVGRQESPESLHFMLAGGLTP 192
Query: 165 ENVEMVIKLVKPFGVDVSSGVERNGKKDEELVREFVRRAK 204
ENV ++L GVDVS GVE NG KD + FV+ AK
Sbjct: 193 ENVGDALRLNGVIGVDVSGGVETNGVKDSNKIANFVKNAK 232
>gb|AAA87582.1| (U46126) chloramphenicol resistance protein [synthetic construct]
Length = 233
Score = 73.7 bits (178), Expect = 1e-12
Identities = 67/220 (30%), Positives = 101/220 (45%), Gaps = 28/220 (12%)
Query: 3 VKVCGVKSLEELEI-VEKYADATGVVVNSKSKRNVPLDAAREIISSAKI-------PVFL 54
VKVCG++S E E ++ AD G++ KR + AR+I S K P +L
Sbjct: 23 VKVCGLQSTEAAECALDSDADLLGIICVPNRKRTIDPVIARKISSLVKAYKNSSGTPKYL 82
Query: 55 VSTMKN--REDWEVAIERTEARYIQIHSDVEPSLLPYLKDEYGVEIMKAFRVPQESENPE 112
V +N +ED + +Q+H D S Y ++ G+ ++K P
Sbjct: 83 VGVFRNQPKEDVLALVNDYGIDIVQLHGD--ESWQEY-QEFLGLPVIKRLVFP------- 132
Query: 113 RDAQMLLKKI-RKYEADLILLDTGAGS-------GKMHDLRVTRIVAEEIPVVVAGGLKP 164
+D +LL +K + + L D+ AG + D + E + ++AGGL P
Sbjct: 133 KDCNILLSAASQKPHSFIPLFDSEAGGTGELLDWNSISDWVGRQESPESLHFMLAGGLTP 192
Query: 165 ENVEMVIKLVKPFGVDVSSGVERNGKKDEELVREFVRRAK 204
ENV ++L GVDVS GVE NG KD + FV+ AK
Sbjct: 193 ENVGDALRLNGVIGVDVSGGVETNGVKDSNKIANFVKNAK 232
>sp|P13997|TRPF_KLULA N-(5'-PHOSPHORIBOSYL)ANTHRANILATE ISOMERASE (PRAI)
>gi|68277|pir||ISVKNL phosphoribosylanthranilate
isomerase (EC 5.3.1.24) - yeast (Kluyveromyces
marxianus var. lactis) >gi|2902|emb|CAA32445.1| (X14230)
N-(5'-phosphoribosyl)anthranilate isomerase (AA 1-210)
[Kluyveromyces lactis]
Length = 210
Score = 73.4 bits (177), Expect = 2e-12
Identities = 67/221 (30%), Positives = 105/221 (47%), Gaps = 31/221 (14%)
Query: 1 MFVKVCGVKSLEELEI-VEKYADATGVVVNSKSKRNVPLDAAREIISSAKIP-----VFL 54
M VKVCG++++E + V+ AD G++ KR + A+ I ++ L
Sbjct: 1 MLVKVCGLQTVEAAKTAVDDGADYLGIICVPGRKRTIDSSVAKGISTAVHQQENVKGTKL 60
Query: 55 VSTMKNR--EDWEVAIERTEARYIQIHSDVE----PSLLPYLKDEYGVEIMKAFRVPQES 108
V +N+ +D IQ+H D + SL+P + I+K F+ PQ
Sbjct: 61 VGVFRNQSVDDVLQLYHEYNLDVIQLHGDEDIKEYRSLIPS-----SIPIIKRFQFPQ-- 113
Query: 109 ENPERDAQMLLKKIRKYEADLILLDTGAGSGKMHDLRVTRIVA-----EEIPVVVAGGLK 163
D ++LL + L L D+G G G L + I + EI ++AGGL
Sbjct: 114 -----DCELLLDLYEHVDNVLTLFDSGEG-GTGEKLNWSAISSWSASHPEIKFIIAGGLN 167
Query: 164 PENVEMVIKLV-KPFGVDVSSGVERNGKKDEELVREFVRRA 203
P+NV + I ++ GVDVS GVE +G KD E V+ F+++A
Sbjct: 168 PDNVSVAINMLPNAIGVDVSGGVETDGIKDLEKVKLFIQQA 208
>sp|P00912|TRPF_YEAST N-(5'-PHOSPHORIBOSYL)ANTHRANILATE ISOMERASE (PRAI)
>gi|68276|pir||ISBYN phosphoribosylanthranilate
isomerase (EC 5.3.1.24) - yeast (Saccharomyces
cerevisiae)
Length = 224
Score = 72.6 bits (175), Expect = 3e-12
Identities = 66/220 (30%), Positives = 101/220 (45%), Gaps = 28/220 (12%)
Query: 3 VKVCGVKSLEELEI-VEKYADATGVVVNSKSKRNVPLDAAREIISSAKI-------PVFL 54
VKVCG++S E E ++ AD G++ KR + AR+I + K P +L
Sbjct: 14 VKVCGLQSTEAAECALDSDADLLGIICVPNRKRTIDPVIARKISTLVKAYKNSSGTPKYL 73
Query: 55 VSTMKN--REDWEVAIERTEARYIQIHSDVEPSLLPYLKDEYGVEIMKAFRVPQESENPE 112
V +N +ED + +Q+H D S Y ++ G+ ++K P
Sbjct: 74 VGVFRNQPKEDVLALVNDYGIDIVQLHGD--ESWQEY-QEFLGLPVIKRLVFP------- 123
Query: 113 RDAQMLLKKI-RKYEADLILLDTGAGS-------GKMHDLRVTRIVAEEIPVVVAGGLKP 164
+D +LL +K + + L D+ AG + D + E + ++AGGL P
Sbjct: 124 KDCNILLSAASQKPHSFIPLFDSEAGGTGELLDWNSISDWVGRQESPESLHFMLAGGLTP 183
Query: 165 ENVEMVIKLVKPFGVDVSSGVERNGKKDEELVREFVRRAK 204
ENV ++L GVDVS GVE NG KD + FV+ AK
Sbjct: 184 ENVGDALRLNGVIGVDVSGGVETNGVKDSNKIANFVKNAK 223
>sp|P24920|TRPC_PHYPR TRYPTOPHAN BIOSYNTHESIS PROTEIN TRP1 [INCLUDES: INDOLE-3-GLYCEROL
PHOSPHATE SYNTHASE (IGPS);
N-(5'-PHOSPHO-RIBOSYL)ANTHRANILATE ISOMERASE (PRAI)]
>gi|169310|gb|AAA33751.1| (M64473)
N-(5'-phosphoribosyl)anthranilate isomerase
indole-3-glycerol-phosphate synthase [Phytophthora
parasitica]
Length = 531
Score = 70.6 bits (170), Expect = 1e-11
Identities = 66/248 (26%), Positives = 110/248 (43%), Gaps = 47/248 (18%)
Query: 4 KVCGVKSLE-ELEIVEKYADATGVVVNSKSKRNVPLDAAREIISSAK---------IPVF 53
KVCG+ ++E L + A+ G+++ S R V + A+ I + + +
Sbjct: 270 KVCGITTVEYALAALRNGANMIGIIMAEHSPRYVEKEEAKAIAKAVREYGERTGPILSDI 329
Query: 54 LVSTMKNREDW-------------------EVAIERTEARYIQIHSDVEPSLLPYLKDEY 94
L S + ++ DW V + +T ++ L+ DE
Sbjct: 330 LESHLDDKSDWFHRNVLALREACSRAPLVVGVFVNKTATEMNAAAEEIGLDLVQLHGDE- 388
Query: 95 GVEIMK--------AFRVPQESENPERDAQMLLKKIRKYEADLILLDTGA-----GSGKM 141
G EI K A +P ++ DA+ +L+++ + A+ ILLDT G+G
Sbjct: 389 GFEICKDIKYPTIRALHLPDTAQCDGVDAEAVLQQVSEGLANYILLDTTVKGQQGGTGVA 448
Query: 142 HDLRVTRIVAE-EIPVVVAGGLKPENVEMVIKLVKPFGVDVSSGVERNGK---KDEELVR 197
D ++ I + +P ++AGGL PENV + + P GVDVSSGVE G KD + V
Sbjct: 449 FDWKIAAIFTQARLPCLMAGGLTPENVVKALSVGHPVGVDVSSGVEVKGSPGVKDLDKVA 508
Query: 198 EFVRRAKN 205
F++ K+
Sbjct: 509 AFLKAVKD 516
>sp|Q59649|TRPF_PSEAE N-(5'-PHOSPHORIBOSYL)ANTHRANILATE ISOMERASE (PRAI)
>gi|11350623|pir||D83257
N-(5'phosphoribosyl)anthranilate (PRA) isomerase PA3113
[imported] - Pseudomonas aeruginosa (strain PAO1)
>gi|1225911|dbj|BAA12028.1| (D83654) phosphoribosyl
anthranilate isomerase [Pseudomonas aeruginosa]
>gi|9949224|gb|AAG06501.1|AE004735_8 (AE004735)
N-(5'phosphoribosyl)anthranilate (PRA) isomerase
[Pseudomonas aeruginosa]
Length = 211
Score = 69.5 bits (167), Expect = 3e-11
Identities = 66/206 (32%), Positives = 98/206 (47%), Gaps = 19/206 (9%)
Query: 3 VKVCGVKSLEE-LEIVEKYADATGVVVNSKSKRNVPLDAAREIISSAKIPVFLVSTMKNR 61
+K+CG+ +E+ L ADA G+V +KS R V + AREI+ + +P F+ S
Sbjct: 6 IKICGITRVEDALAAAAAGADAIGLVFYAKSPRAVDIHRAREIVRA--LPPFVTSV---- 59
Query: 62 EDWEVAIERTEARYIQIHSDVEPSLLPYLKDEYGVEIMKAFRVPQESENPERDAQMLLKK 121
+ + + +I V LL + DE E + R P + ++ +
Sbjct: 60 ---GLFVNASRCELGEILDAVPLDLLQFHGDERA-EDCEGHRRPYLKALRMKPGDDIVGR 115
Query: 122 IRKYE-ADLILLDT-----GAGSGKMHDLRVTRIVAEEIPVVVAGGLKPENVEMVIKLVK 175
Y A ILLDT G+G D + + P+V+AGGL P+NV ++ VK
Sbjct: 116 AAAYPGAAGILLDTYVEGVPGGTGAAFDWSLVPTDLGK-PLVLAGGLTPDNVGRAVEQVK 174
Query: 176 PFGVDVSSGVERN-GKKDEELVREFV 200
P+ VDVS GVE + G KD VR FV
Sbjct: 175 PYAVDVSGGVEASKGIKDAARVRAFV 200
>sp|P16923|TRPF_ACICA N-(5'-PHOSPHORIBOSYL)ANTHRANILATE ISOMERASE (PRAI)
>gi|78096|pir||A34091 phosphoribosylanthranilate
isomerase (EC 5.3.1.24) - Acinetobacter calcoaceticus
>gi|141791|gb|AAA21897.1| (M34485) 5'-phosphoribosyl
anthranilate isomerase [Acinetobacter calcoaceticus]
>gi|141797|gb|AAA21901.1| (M58444) phosphoribosyl
anthranilate isomerase [Acinetobacter calcoaceticus]
Length = 213
Score = 69.1 bits (166), Expect = 4e-11
Identities = 56/205 (27%), Positives = 95/205 (46%), Gaps = 12/205 (5%)
Query: 4 KVCGVKSLEELEI-VEKYADATGVVVNSKSKRNVPLDAAREIISSAKIPVFLVSTMKNRE 62
K+CG+ ++++ V ADA G+V S R+V + A+ ++ V +V N
Sbjct: 6 KICGITRSQDVQAAVSAGADAIGLVFFPPSPRHVSIAQAQALLQHIPAYVQVVGLFVNAT 65
Query: 63 DWEV--AIERTEARYIQIHSDVEPSLLPYLKDEYGVEIMKAFRVPQESENPERDAQMLLK 120
++ ++ +Q+H D P + + KA +V PE D ++
Sbjct: 66 ADQIKSVLDCVALDVLQLHGDETPEQCQEIALQCKRRWYKAIQV-----KPELDVVDEVQ 120
Query: 121 KIRKYEADLILLDTG---AGSGKMHDLRVTRIVAEEIPVVVAGGLKPENVEMVIKLVKPF 177
+ + A +LLD G H ++ +IP+++AGGL PENV I+ F
Sbjct: 121 RYQAAGASAVLLDAWHPELKGGTGHQFDWSKFPKLDIPLILAGGLTPENVVDAIQTTHAF 180
Query: 178 GVDVSSGVE-RNGKKDEELVREFVR 201
VDVS GVE G KD++L+ F++
Sbjct: 181 AVDVSGGVEAAKGIKDKQLIERFMQ 205
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.316 0.135 0.366
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 70842392
Number of Sequences: 2977
Number of extensions: 2809272
Number of successful extensions: 10485
Number of sequences better than 1.0e-10: 21
Number of HSP's better than 0.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 10459
Number of HSP's gapped (non-prelim): 21
length of query: 208
length of database: 189,106,746
effective HSP length: 59
effective length of query: 149
effective length of database: 153,796,013
effective search space: 22915605937
effective search space used: 22915605937
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.6 bits)
S2: 163 (67.9 bits)