BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB2062 (PAB2062) DE:Hypothetical protein
(407 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||F75158 hypothetical protein PAB2062 - Pyrococcus abyssi (st... 819 0.0
pir||B71198 hypothetical protein PH1856 - Pyrococcus horikoshii ... 673 0.0
gb|AAK42853.1| Conserved hypothetical protein [Sulfolobus solfat... 281 1e-74
gi|11499185 A. fulgidus predicted coding region AF1590 [Archaeog... 271 9e-72
gb|AAK41160.1| Conserved hypothetical protein [Sulfolobus solfat... 243 3e-63
pir||H72502 hypothetical protein APE1998 - Aeropyrum pernix (str... 235 1e-60
emb|CAC12501.1| (AL445067) conserved hypothetical protein [Therm... 227 2e-58
pir||C69196 hypothetical protein MTH720 - Methanobacterium therm... 217 2e-55
gb|AAG18919.1| (AE004994) Vng0351c [Halobacterium sp. NRC-1] 215 7e-55
pir||A69418 hypothetical protein AF1346 - Archaeoglobus fulgidus... 194 2e-48
gi|11546069 hypothetical protein [Archaeoglobus fulgidus] 194 2e-48
pir||B69418 hypothetical protein AF1347 - Archaeoglobus fulgidus... 93 6e-18
gi|11500036 hypothetical protein [Archaeoglobus fulgidus] 93 6e-18
>pir||F75158 hypothetical protein PAB2062 - Pyrococcus abyssi (strain Orsay)
>gi|5457859|emb|CAB49349.1| (AJ248284) hypothetical
protein [Pyrococcus abyssi]
Length = 407
Score = 819 bits (2092), Expect = 0.0
Identities = 407/407 (100%), Positives = 407/407 (100%)
Query: 1 MIKVNSELCAICKGRKLLCGRPVCPILERFRIAREVAPLVSKEDVFGSSPPSVFVGEYGY 60
MIKVNSELCAICKGRKLLCGRPVCPILERFRIAREVAPLVSKEDVFGSSPPSVFVGEYGY
Sbjct: 1 MIKVNSELCAICKGRKLLCGRPVCPILERFRIAREVAPLVSKEDVFGSSPPSVFVGEYGY 60
Query: 61 PRVRLGPLVPPIEGDTKYLDDPMRWENVKLEDILRYRSLLIMGQVKVHVDLRKSGRIIQE 120
PRVRLGPLVPPIEGDTKYLDDPMRWENVKLEDILRYRSLLIMGQVKVHVDLRKSGRIIQE
Sbjct: 61 PRVRLGPLVPPIEGDTKYLDDPMRWENVKLEDILRYRSLLIMGQVKVHVDLRKSGRIIQE 120
Query: 121 VQELAMSSKPVDTEMLLKRKPTVKIIPSEFAPPIGPRGEVRKLEITENPKVPRDVDRIIG 180
VQELAMSSKPVDTEMLLKRKPTVKIIPSEFAPPIGPRGEVRKLEITENPKVPRDVDRIIG
Sbjct: 121 VQELAMSSKPVDTEMLLKRKPTVKIIPSEFAPPIGPRGEVRKLEITENPKVPRDVDRIIG 180
Query: 181 DELKAKDAIISLYESGFDEYYIVRLLSVGLLGVRPKIVPTRWSITAVQDTIGSYLRKIVL 240
DELKAKDAIISLYESGFDEYYIVRLLSVGLLGVRPKIVPTRWSITAVQDTIGSYLRKIVL
Sbjct: 181 DELKAKDAIISLYESGFDEYYIVRLLSVGLLGVRPKIVPTRWSITAVQDTIGSYLRKIVL 240
Query: 241 HFDVISQYEVYHSEFLGNRYVVLLLPRRYSFELLEVWLKGSLFGATKPIVIHDYEDYRGI 300
HFDVISQYEVYHSEFLGNRYVVLLLPRRYSFELLEVWLKGSLFGATKPIVIHDYEDYRGI
Sbjct: 241 HFDVISQYEVYHSEFLGNRYVVLLLPRRYSFELLEVWLKGSLFGATKPIVIHDYEDYRGI 300
Query: 301 KGYAEQTSGAYYAARLSVLEHLRKRKKQASAMVFREVTPAYYAPVGVWQVRIGVKKALEG 360
KGYAEQTSGAYYAARLSVLEHLRKRKKQASAMVFREVTPAYYAPVGVWQVRIGVKKALEG
Sbjct: 301 KGYAEQTSGAYYAARLSVLEHLRKRKKQASAMVFREVTPAYYAPVGVWQVRIGVKKALEG 360
Query: 361 TPERFENLKEALGKIGSILEHPLEEYIAKSWLIRQLNQITIMSFLGV 407
TPERFENLKEALGKIGSILEHPLEEYIAKSWLIRQLNQITIMSFLGV
Sbjct: 361 TPERFENLKEALGKIGSILEHPLEEYIAKSWLIRQLNQITIMSFLGV 407
>pir||B71198 hypothetical protein PH1856 - Pyrococcus horikoshii
>gi|3258294|dbj|BAA30977.1| (AP000007) 409aa long
hypothetical protein [Pyrococcus horikoshii]
Length = 409
Score = 673 bits (1718), Expect = 0.0
Identities = 304/407 (74%), Positives = 374/407 (91%)
Query: 1 MIKVNSELCAICKGRKLLCGRPVCPILERFRIAREVAPLVSKEDVFGSSPPSVFVGEYGY 60
MIK+NS +CAICKGRKLLCGRPVCPILE+ RIAREV PLV++ED+FGSSPPSVFVGEYGY
Sbjct: 1 MIKLNSNICAICKGRKLLCGRPVCPILEKIRIAREVTPLVNREDIFGSSPPSVFVGEYGY 60
Query: 61 PRVRLGPLVPPIEGDTKYLDDPMRWENVKLEDILRYRSLLIMGQVKVHVDLRKSGRIIQE 120
P+VR+GPLVPPIEGDT YLD+P++WEN ++ED++++RS+L++GQ +VH+DLR+S RII+E
Sbjct: 61 PKVRIGPLVPPIEGDTSYLDNPLKWENARIEDVIKFRSILVLGQTRVHIDLRRSDRIIEE 120
Query: 121 VQELAMSSKPVDTEMLLKRKPTVKIIPSEFAPPIGPRGEVRKLEITENPKVPRDVDRIIG 180
+QELAMS KP+DTEMLLKRKP +K+IPSEFAPP+GP GEV+ EI ENPKVP+ V+R++G
Sbjct: 121 LQELAMSIKPIDTEMLLKRKPILKVIPSEFAPPLGPSGEVKNFEIAENPKVPKKVERVVG 180
Query: 181 DELKAKDAIISLYESGFDEYYIVRLLSVGLLGVRPKIVPTRWSITAVQDTIGSYLRKIVL 240
DE+KAKDA+I+LYESGFDEYYI+RLLSVGLLG++P+IVPTRWSITAVQDT+G+YLRK +L
Sbjct: 181 DEIKAKDAVITLYESGFDEYYIIRLLSVGLLGLKPRIVPTRWSITAVQDTLGNYLRKSIL 240
Query: 241 HFDVISQYEVYHSEFLGNRYVVLLLPRRYSFELLEVWLKGSLFGATKPIVIHDYEDYRGI 300
+F+ I YEVY SEFLGNRYV+LL+PRRYSFELLEVWLKGSLFG+ P+V+HD EDYRGI
Sbjct: 241 NFEPIETYEVYTSEFLGNRYVILLMPRRYSFELLEVWLKGSLFGSEDPVVLHDCEDYRGI 300
Query: 301 KGYAEQTSGAYYAARLSVLEHLRKRKKQASAMVFREVTPAYYAPVGVWQVRIGVKKALEG 360
KGYAE+T+GAYYAARLSVLEHLR+RK+QASA+VFREVTPAYY PVGVWQ+R+GVKKALEG
Sbjct: 301 KGYAEETTGAYYAARLSVLEHLRRRKRQASAIVFREVTPAYYTPVGVWQIRVGVKKALEG 360
Query: 361 TPERFENLKEALGKIGSILEHPLEEYIAKSWLIRQLNQITIMSFLGV 407
PE+F L++AL ++ L+HPLE Y+A+SW+++QLNQ +I SFLGV
Sbjct: 361 IPEKFYTLEDALNRLRVKLKHPLERYLARSWILKQLNQRSITSFLGV 407
>gb|AAK42853.1| Conserved hypothetical protein [Sulfolobus solfataricus]
Length = 397
Score = 281 bits (711), Expect = 1e-74
Identities = 157/394 (39%), Positives = 231/394 (57%), Gaps = 13/394 (3%)
Query: 4 VNSELCAICKGRKLLCGRPVCPILERFRIAREVAPLVSKEDVFGSSPPSVFVGEYGYPRV 63
+ ELC C+G K LCG CPI+ + R V+ ++V+GSSPPSVFVG + YP++
Sbjct: 2 IRPELCIRCRGAKYLCGLSYCPIIVNTKTVR-----VNFKEVYGSSPPSVFVGRFSYPKI 56
Query: 64 RLGPLVPPIEGDTKYLDDPMRWENVKLEDILRYRSLLIMGQVKVHVD-LRKSGRIIQEVQ 122
+ P PPI GDT +D W N L + L R L+ G VK H D R R + ++Q
Sbjct: 57 TVYPSAPPILGDTSKFEDSKYWLNADLSEFLSMRLSLVRGGVKYHKDDARLPDRFLLDIQ 116
Query: 123 ELAMSSKPVDTEMLLKRKPTVKIIPSEFAPPIGPRGEVRKLEITENPKVPRDVDRI-IGD 181
+ +SS+PV+ ++ LKR P+ I+ E PP+GP + KLEI P V+++ + +
Sbjct: 117 SITISSRPVELDLRLKRIPSGGIL-DESLPPLGPSAPLEKLEIATLPPPLAVVEKVYVDN 175
Query: 182 ELKAKDAIISLYESGFDEYYIVRLLSVGLLGVRPKIVPTRWSITAVQDTIGSYLRKIVLH 241
+++AKD I+ LY +G D I R+LS+G +G K+VPTRWSITAV I L + + +
Sbjct: 176 DMRAKDGIMKLYNAGIDVEKISRILSIGGIGKERKLVPTRWSITAVDKAISDTLIENIKN 235
Query: 242 FDVISQYEVYHSEFLGNRYVVLLLPRRYSFELLEVWLKGSL---FGATKPIVIHDYEDYR 298
+D I + EVY ++ N ++ +LLPR +SFE E W GS FG I + D E Y
Sbjct: 236 YDTIDKVEVYFRKYNKNLFIAILLPRDWSFEWGEAWYPGSTWNKFGNYVDIEV-DNERYH 294
Query: 299 GIKGYAEQTSGAYYAARLSVLEHLRKRKKQASAMVFREVTPAYYAPVGVWQVRIGVKKAL 358
G Y E G YYA+RL V E L RK+QA+A+++RE+ + PVGVW VR VK+
Sbjct: 295 GRSDYPE-IGGCYYASRLGVTEFLASRKRQATAILWREIYEGFNLPVGVWFVRENVKEMF 353
Query: 359 EGTPERFENLKEALGKIGSILEHPLEEYIAKSWL 392
+G P F+++ AL + +L L+++++KS L
Sbjct: 354 KGKPVVFDDISTALNFVKRLLRSDLKQWLSKSLL 387
>gi|11499185 A. fulgidus predicted coding region AF1590 [Archaeoglobus fulgidus]
>gi|7450484|pir||E69448 hypothetical protein AF1590 -
Archaeoglobus fulgidus >gi|2648976|gb|AAB89664.1|
(AE000993) A. fulgidus predicted coding region AF1590
[Archaeoglobus fulgidus]
Length = 391
Score = 271 bits (686), Expect = 9e-72
Identities = 149/400 (37%), Positives = 239/400 (59%), Gaps = 14/400 (3%)
Query: 9 CAICKGRKLLCGRPVCPILERFRIAREVAPLVSKE-DVFGSSPPSVFVGEYGYPRVRLGP 67
C C+GR +LC R VCP++ R P VS E D+ GSSPPSVFVG YGYP+VR+ P
Sbjct: 3 CIECRGR-MLCSRKVCPLMPSLR------PQVSVERDILGSSPPSVFVGRYGYPKVRICP 55
Query: 68 LVPPIEGDTKYLDDPMRWENVKLEDILRYRSLLIMGQVKVHVDLRKSGRIIQEVQELAMS 127
VPP GDTK D P W V +E +L +R +I+GQ + D+R+S + ++ VQE+++
Sbjct: 56 AVPPFTGDTKIYDTPEMWREVPVERVLEFRYSMILGQFR--ADVRRS-KEVEVVQEMSLY 112
Query: 128 SKPVDTEMLLKRKPTVKIIPSEFAPPIGPRGEVRKLEITENPKVPRDVDRIIGD-ELKAK 186
KP+D E+ + P+V+ + PP G +++ I P+ P+ V+++ D +L+A
Sbjct: 113 DKPIDVEVSFAKPPSVRAFFDDVLPPFGASAPAKEVIIHSAPRPPKAVEKVYYDTDLRAV 172
Query: 187 DAIISLYESGFDEYYIVRLLSVGLLGVRPKIVPTRWSITAVQDTIGSYLRKIVLHFDVIS 246
+A+ LYE G +I +LLS G LGV+ K+VPTRW+ITAV DT+ + + + ++ I
Sbjct: 173 EAMSYLYERGVAVSHIQKLLSAGTLGVKRKLVPTRWAITAVDDTLSKQIIEEIKQYETID 232
Query: 247 QYEVYHSEFLGNRYVVLLLPRRYSFELLEVWLKGSLFGATKPI-VIHDYEDYRGIKGYAE 305
+Y V+ + N +V +L P +S+E E W + + T+ + V+ D E + G YA
Sbjct: 233 RYRVFVLKESKNLFVAILCPSPWSYEWGEAWYPDTTWNRTRKVGVLTDSEGFFGRTTYA- 291
Query: 306 QTSGAYYAARLSVLEHLRKRKKQASAMVFREVTPAYYAPVGVWQVRIGVKKALEGTPERF 365
+ G YY++RL+ E+LR+ ++QA+A+V+RE+ P + P+GVW VR ++K G F
Sbjct: 292 RLGGCYYSSRLATAEYLRRIRRQATAIVWREIYPGFNVPIGVWFVREMLRKMYAGKYCEF 351
Query: 366 ENLKEALGKIGSILEHPLEEYIAKSWLIRQLNQITIMSFL 405
+ L++AL + + +I KS L+++ Q T+ F+
Sbjct: 352 DTLEDALRFVDKHSNLDVGRWIEKSTLVKRGRQRTLWEFM 391
>gb|AAK41160.1| Conserved hypothetical protein [Sulfolobus solfataricus]
Length = 408
Score = 243 bits (614), Expect = 3e-63
Identities = 148/417 (35%), Positives = 237/417 (56%), Gaps = 24/417 (5%)
Query: 1 MIKVNSELCAICKGRKLLCGRPVCPILERFR----IAREVAPLVSKEDVFGSSPPSVFVG 56
M K+ +ELC CK K LCG P CPI+ERFR +++ S + V GS+PPS VG
Sbjct: 1 MHKIPAELCIKCKSHKNLCGLPYCPIMERFRGMVSSLQKIEIDTSFKLVEGSTPPSGIVG 60
Query: 57 EYGYPRVRLGPLVPPIEGDTKYLDDPMRWENVK-------LEDILRYRSLLIMGQVKVHV 109
E GYP+V L +PP + Y +D ++ENVK L DI++ RS LI V V
Sbjct: 61 EKGYPKVSLIVNIPP----SVYGEDARKYENVKEWWGRINLGDIIKLRSSLISSITTVKV 116
Query: 110 DLRKSGRIIQEVQELAMSSKPVDTEMLLKRKPTVKIIPSEFAPPIGPRGEVRKLEITENP 169
+ + + E+ +S P+ TE LK K+ P GP G ++++ +NP
Sbjct: 117 E-KATEYYDTEIPLAIISDNPIVTEAKLKTLEA-KLKFDGVILPRGPSGIAEQIKVLDNP 174
Query: 170 KVPRDVDRIIGDELKAKDAIISLYESGFDEYYIVRLLSVGLLGVRP--KIVPTRWSITAV 227
KVP +D++I D+ K+ +AI+ LY D Y I+ LS GLLG + + VPTRW+ITAV
Sbjct: 175 KVPTKLDKLIFDDAKSTEAILELYRYNVDYYKIIHALSFGLLGRKKNRRFVPTRWAITAV 234
Query: 228 QDTIGSYLRKIVLHFDVISQYEVYHSEFLGNRYVVLLLPRRYSFELLEVWLKGSLFGATK 287
+G +L +++++ I++ EVYHS +LGN + V+L P +++ +E+W SL+ ++
Sbjct: 235 DSIVGKFLYNKIINYNEINEIEVYHSSYLGNYFYVILYPSKFNSTWIEIWHPLSLW--SQ 292
Query: 288 PIVIHDYEDYRGIKGYAEQTSGAYYAARLSVLEHLRKRKKQASAMVFREVTPAYYAPVGV 347
+ I + ++ G E G Y AARL+VLEHL + K+Q+ ++ RE+T Y+APVG
Sbjct: 293 ELTISELKE--NFWGEYEYLDGGYMAARLAVLEHLEQIKRQSGIIIIREITEEYFAPVGN 350
Query: 348 WQVRIGVKKALEGTPERFENLKEALGKIGSILEHPLEEYIAKSWLIRQLNQITIMSF 404
W +R V+ A++ +++NL A+ ++ L+ + + ++ + +NQ +I F
Sbjct: 351 WHIRETVRNAMKNRLGKYDNLNLAISEVNKKLKAKINLFELRT-INSLINQKSIYDF 406
>pir||H72502 hypothetical protein APE1998 - Aeropyrum pernix (strain K1)
>gi|5105696|dbj|BAA81008.1| (AP000063) 410aa long
hypothetical protein [Aeropyrum pernix]
Length = 410
Score = 235 bits (592), Expect = 1e-60
Identities = 142/373 (38%), Positives = 215/373 (57%), Gaps = 16/373 (4%)
Query: 1 MIKVNSELCAICKGRKLLCGRPVCPILERFRI-AREVAPLVSKEDVFGSSPPSVFVGEYG 59
M ++ ELC CKG +LLCG P CPIL+R R AR + +V GS+PPS+ VGE G
Sbjct: 1 MPRIPPELCTRCKGYRLLCGLPSCPILDRLRSQARSLERARWSREVQGSTPPSILVGERG 60
Query: 60 YPRVRLGPLVPP-IEG-DTKYLDDPMRWENVK--LEDILRYRSLLIMGQVKVHVDLRKSG 115
YP VRL +VPP + G + + +DP+ W + + L I+R RS L+ G ++ D R+
Sbjct: 61 YPGVRLYYMVPPGVAGPEAQRYEDPLGWRSSRTPLGSIVRLRSELVAGVLRA--DARRPH 118
Query: 116 RII--QEVQELAMSSKPVDTEMLLKRKPTVKIIPSEFAPPIGPRGEVRKLEITENPKVPR 173
++ +E+ A+S +PVD+ + L R P ++ + P+GP R++E+ NP++ +
Sbjct: 119 ELLYQREIGPAALSERPVDSFLELARLPVPRVSFDGYTKPVGPTAPARRVEVEGNPRLEK 178
Query: 174 DVDRIIGDELKAKDAIISLYESGFDEYYIVRLLSVGLLG--VRPKIVPTRWSITAVQDTI 231
V+R I ++ KA+ L+ G + Y I R LS+G LG ++VPTRW+ITAV + +
Sbjct: 179 PVERAIWEDEKAEVMAWELFNRGVNVYTIQRALSIGFLGRLRARRLVPTRWAITAVDEML 238
Query: 232 GSYLRKIVLHFDVISQYEVYHSEFLGNRYVVLLLPRRYSFELLEVWLKGSLF--GATKPI 289
LR+++ I EVY SE+L NR++++L P E +E+W +++ GA P+
Sbjct: 239 SRRLRRLLKTAPEIGGVEVYFSEYLHNRFLIILKPGPGWMEWIEIWHPHTVWTPGAGGPV 298
Query: 290 VIHDYEDYRGIKGYAEQTSGAYYAARLSVLEHLRKRKKQASAMVFREVTPAYYAPVGVWQ 349
ED G K + G + AA+L VLEHL R ++A ++ REV P YYAPVG W
Sbjct: 299 ASVVREDPLGRKNMED---GGFSAAKLPVLEHLYSRGRRADVIIVREVLPQYYAPVGNWH 355
Query: 350 VRIGVKKALEGTP 362
+R VK AL P
Sbjct: 356 IRETVKHALAQKP 368
>emb|CAC12501.1| (AL445067) conserved hypothetical protein [Thermoplasma
acidophilum]
Length = 421
Score = 227 bits (573), Expect = 2e-58
Identities = 135/414 (32%), Positives = 221/414 (52%), Gaps = 11/414 (2%)
Query: 2 IKVNSELCAICKGRKLLCGRPVCPILERFRIAREVAPLVSKEDVFGSSPPSVFVGEYGYP 61
+ + + LC C+G K LCG CPI +++ + +++ GSSPPSVFVG YGYP
Sbjct: 11 MSIPASLCMRCRGAKRLCGLSYCPIEIEMITRSKISGRSNIKEIDGSSPPSVFVGRYGYP 70
Query: 62 RVRLGPLVPPIEGDTKYLDDPMRWENVKLEDILRYRSLLIMGQVKVHVDLR-KSGRIIQE 120
+V + P PPI GDT L W ++ LE+ + R ++ G + VD ++Q
Sbjct: 71 KVSVYPSAPPIRGDTSNLSVSASWLDMPLEEFISARLSMLRGSREFAVDAAVDPDALLQR 130
Query: 121 VQELAMSSKPVDTEMLLKRK-PTVKIIPSEFAPPIGPRGEVRKLEITENPKVPRDVDRII 179
+QE+++S VD ++LL+R T KI + P+GP ++ + + + ++++
Sbjct: 131 IQEISLSKGSVDVDILLERPIDTSKIEIDDHVTPMGPASPMKTFSL-DPSGTEQHIEKVY 189
Query: 180 GD-ELKAKDAIISLYESGFDEYYIVRLLSVGLL--GVRPKIVPTRWSITAVQDTIGSYLR 236
D ++KAKDA++ LYE+G D I + LSVG++ G KIVPTRWSITAV I L
Sbjct: 190 YDTDMKAKDAVMKLYENGIDIERISQSLSVGIMGEGKNRKIVPTRWSITAVDSMISDDLI 249
Query: 237 KIVLHFDVISQYEVYHSEFLGNRYVVLLLPRRYSFELLEVWLKGS---LFGATKPIVIHD 293
+ I ++ Y GN ++ +L P + +E E W GS ++G + I D
Sbjct: 250 EEAKQRPTIDKFLAYRMRVNGNYFMAILTPSNWIYEWGESWFPGSTWNMWGNQAEVEI-D 308
Query: 294 YEDYRGIKGYAEQTSGAYYAARLSVLEHLRKRKKQASAMVFREVTPAYYAPVGVWQVRIG 353
YE Y G K Y + G YY++R++V E +K + A+ +RE+ P + PVGVW VR
Sbjct: 309 YEGYNGRKTYPD-IGGCYYSSRVAVGEAFKKLGRSGGAITWREIYPGFNIPVGVWFVREN 367
Query: 354 VKKALEGTPERFENLKEALGKIGSILEHPLEEYIAKSWLIRQLNQITIMSFLGV 407
+++ PE F+ + EA+ + + P E++ + S++ + L + F +
Sbjct: 368 MRRLFAQKPEVFDTIDEAMNYVSEWMRVPPEKWKSNSYVYKTLKYNNLERFFSL 421
>pir||C69196 hypothetical protein MTH720 - Methanobacterium thermoautotrophicum
(strain Delta H) >gi|2621808|gb|AAB85225.1| (AE000851)
unknown [Methanobacterium thermoautotrophicum]
Length = 388
Score = 217 bits (546), Expect = 2e-55
Identities = 132/371 (35%), Positives = 219/371 (58%), Gaps = 19/371 (5%)
Query: 43 EDVFGSSPPSVFVGEYGYPRVRLGPLVPPIEGDTKYLDDPMRW--ENVKLEDILRYRSLL 100
E++ G++PPSVF+G + YP+V GP++ P++ + + D P RW E E+I+ YR L
Sbjct: 26 EELEGATPPSVFIGSWNYPKVYAGPMIAPVQEEVEIFDSPERWIPERKTQEEIIDYRLNL 85
Query: 101 IMGQVKVHV-DLRKSGRIIQEVQELAMSSKPVDTEMLLKRKPTVKIIPSEFAPPIGPRGE 159
+ G+ V V DL +++++QE+++SS +++E +RKP + SE P GP
Sbjct: 86 VRGKQLVGVRDL--DNHLVEKLQEISLSSGAIESEAQFRRKPR-GLFFSEEQTPHGPSAV 142
Query: 160 VRKLEITENPKVPRDVDRIIGD-ELKAKDAIISLYESGFDEYYIVRLLSVGLLGV--RPK 216
+ EI EN K R+++R D +L+A++AI+ L+ G + + LSVG LG R K
Sbjct: 143 LENFEI-ENVKWDRELERAYHDTDLRAREAIVELHRKGTPFSAVQKALSVGALGEGKRRK 201
Query: 217 IVPTRWSITAVQDTIGSYLRKIVLHFDVISQYEVYHSEFLGNRYVVLLLPRRYSFELLEV 276
+VPTRWSITA T+ + + VL ++ I + V+ E L N Y++LL P + +E +E
Sbjct: 202 LVPTRWSITACDSTLADHFLERVLEYEPIDTFRVHEFESLKNHYLILLTPSEWQYEWMEA 261
Query: 277 WLKGSLFGATKPIVIHDYEDYRGIKGYAEQTSGAYYAARLSVLEHLRKRKKQASAMVFRE 336
++K + ++ D+E +G + Y+ + G YY+A+++VL+ L + +KQA A++ RE
Sbjct: 262 FMKRD----GRAMIFSDHETGKGKREYS-RVGGCYYSAKMAVLDALDREEKQAGAIILRE 316
Query: 337 VTPAYYAPVGVWQVRIGVKKALEGTPERFENLKEALGKIGSILEHPLEEYIAKSWLIRQL 396
P Y P+GV+ VR VK A++ P F +L+ AL I S L+ LE + +S L+++L
Sbjct: 317 AYPG-YVPLGVFNVRENVKNAMDTEPTMFNDLRGALEFIDSKLKLGLEAFRVRSNLLKEL 375
Query: 397 ---NQITIMSF 404
Q T+ SF
Sbjct: 376 EVSRQTTLDSF 386
>gb|AAG18919.1| (AE004994) Vng0351c [Halobacterium sp. NRC-1]
Length = 429
Score = 215 bits (542), Expect = 7e-55
Identities = 138/381 (36%), Positives = 207/381 (54%), Gaps = 25/381 (6%)
Query: 32 IAREVAPLVSKEDVFGSSPPSVFVGEYGYPRVRLGPLVPPIEGDTKYLDDPMRW------ 85
+ + V + + + G++ PSVFVG YP V G ++ P+ GD DP +
Sbjct: 44 VEQGVTEALQGDTLVGATAPSVFVGRSAYPDVSAG-ILSPVAGDA----DPAEFATSGEW 98
Query: 86 --ENVKLEDILRYRSLLIMGQVKVHVDLRKS-GRIIQEVQELAMSSKPVDTEMLLKRKPT 142
+ + ++++L+YR+ L+ + +V++ + +E+AM+ +PVD E+ L PT
Sbjct: 99 YQQGLGIDNVLQYRTGLLNSRRAANVNVHDVWDGFVGTQREVAMADRPVDVEIGLSDAPT 158
Query: 143 VK----IIPSEFAPPIGPRGEVRKLEITENPKVPRDVDRIIGDE-LKAKDAIISLYESGF 197
P+ AP GP + ENP VPR V++ + D+ A+ A+ LY G
Sbjct: 159 FDREEYTSPAANAPS-GPNASAESAALGENPHVPRYVEKTLADDDWAAEGAMTYLYRRGL 217
Query: 198 DEYYIVRLLSVGLLGV--RPKIVPTRWSITAVQDTIGSYLRKIVLHFDVISQYEVYHSEF 255
D Y I R+LSVG LG ++VPTRWSITAV DT+G YLR + + + V+ +E+
Sbjct: 218 DVYQINRVLSVGALGQGHHRRLVPTRWSITAVDDTVGQYLRGTIRDAPSVDEVTVHVNEY 277
Query: 256 LGNRYVVLLLPRRYSFELLEVWLKGSLFGATKP---IVIHDYEDYRGIKGYAEQTSGAYY 312
+GNRY V+L P R+ EL+E+ GS++ + E Y G GY ++T+GAYY
Sbjct: 278 MGNRYWVVLAPGRWEHELVEMKAPGSIWNPDPGGDLWMAAASEGYEGRTGYVDETAGAYY 337
Query: 313 AARLSVLEHLRKRKKQASAMVFREVTPAYYAPVGVWQVRIGVKKALEGTPERFENLKEAL 372
AARL VLEHL +QA A+V REV+ Y+APVGVWQVR V+ A +G P E A+
Sbjct: 338 AARLGVLEHLSDIGRQAKALVLREVSDDYWAPVGVWQVRESVRNAFDGQPGEAETFHGAV 397
Query: 373 GKIGSILEHPLEEYIAKSWLI 393
+I L L KS ++
Sbjct: 398 AEISDHLPVSLAALRRKSDMV 418
>pir||A69418 hypothetical protein AF1346 - Archaeoglobus fulgidus
>gi|2649242|gb|AAB89912.1| (AE001011) A. fulgidus
predicted coding region AF1346 [Archaeoglobus fulgidus]
Length = 288
Score = 194 bits (487), Expect = 2e-48
Identities = 103/278 (37%), Positives = 165/278 (59%), Gaps = 11/278 (3%)
Query: 9 CAICKGRKLLCGRPVCPILERFRIAREVAPLVSKEDVFGSSPPSVFVGEYGYPRVRLGPL 68
CA CKG KLLCGR CP+LE++R +E+ + SPPS+FVG GYP+V GPL
Sbjct: 6 CAECKG-KLLCGRSKCPLLEKYRFLKEIK---IDSRILDPSPPSIFVGRVGYPKVYAGPL 61
Query: 69 VPPIEGDTKYLDDPMRWENVKLEDILRYRSLLIMGQVKVHV-DLRKSGRIIQEVQELAMS 127
V I D Y D P W+++ E+++R R+ ++ + V D+R+ + + E+QE+ +
Sbjct: 62 VS-INADPVYADSPWLWKSI--EEVIRLRTSMLRVSRRFRVEDVREEKKELTEMQEMTAA 118
Query: 128 SKPVDTEMLLKRKPTVKIIPSEFAPPIGPRGEVRKLEITENPKVPRDVDRIIGDELKAKD 187
KPVD E + RK + K + P+G +++ ENPK+P V+++ D++KA +
Sbjct: 119 IKPVDVEAEI-RKISRKAEFDDVMQPMGYSAIAESIKLAENPKIPDKVEKVYYDDMKAYE 177
Query: 188 AIISLYESGFDEYYIVRLLSVGLLGVRP--KIVPTRWSITAVQDTIGSYLRKIVLHFDVI 245
A+ LY GF YY+ ++ S G+LG R K+VPTRWSITAV +G +++ + + I
Sbjct: 178 ALSYLYNHGFSTYYLQKIFSAGILGERKSRKLVPTRWSITAVHSIVGEAIKREIAAYKPI 237
Query: 246 SQYEVYHSEFLGNRYVVLLLPRRYSFELLEVWLKGSLF 283
+ +++ E GN + V+L P Y F+L+E+W + S +
Sbjct: 238 DKTLLFNYEHFGNHFEVILSPENYFFQLVEIWQRKSFW 275
>gi|11546069 hypothetical protein [Archaeoglobus fulgidus]
Length = 284
Score = 194 bits (487), Expect = 2e-48
Identities = 103/278 (37%), Positives = 165/278 (59%), Gaps = 11/278 (3%)
Query: 9 CAICKGRKLLCGRPVCPILERFRIAREVAPLVSKEDVFGSSPPSVFVGEYGYPRVRLGPL 68
CA CKG KLLCGR CP+LE++R +E+ + SPPS+FVG GYP+V GPL
Sbjct: 6 CAECKG-KLLCGRSKCPLLEKYRFLKEIK---IDSRILDPSPPSIFVGRVGYPKVYAGPL 61
Query: 69 VPPIEGDTKYLDDPMRWENVKLEDILRYRSLLIMGQVKVHV-DLRKSGRIIQEVQELAMS 127
V I D Y D P W+++ E+++R R+ ++ + V D+R+ + + E+QE+ +
Sbjct: 62 VS-INADPVYADSPWLWKSI--EEVIRLRTSMLRVSRRFRVEDVREEKKELTEMQEMTAA 118
Query: 128 SKPVDTEMLLKRKPTVKIIPSEFAPPIGPRGEVRKLEITENPKVPRDVDRIIGDELKAKD 187
KPVD E + RK + K + P+G +++ ENPK+P V+++ D++KA +
Sbjct: 119 IKPVDVEAEI-RKISRKAEFDDVMQPMGYSAIAESIKLAENPKIPDKVEKVYYDDMKAYE 177
Query: 188 AIISLYESGFDEYYIVRLLSVGLLGVRP--KIVPTRWSITAVQDTIGSYLRKIVLHFDVI 245
A+ LY GF YY+ ++ S G+LG R K+VPTRWSITAV +G +++ + + I
Sbjct: 178 ALSYLYNHGFSTYYLQKIFSAGILGERKSRKLVPTRWSITAVHSIVGEAIKREIAAYKPI 237
Query: 246 SQYEVYHSEFLGNRYVVLLLPRRYSFELLEVWLKGSLF 283
+ +++ E GN + V+L P Y F+L+E+W + S +
Sbjct: 238 DKTLLFNYEHFGNHFEVILSPENYFFQLVEIWQRKSFW 275
>pir||B69418 hypothetical protein AF1347 - Archaeoglobus fulgidus
>gi|2649246|gb|AAB89916.1| (AE001011) A. fulgidus
predicted coding region AF1347 [Archaeoglobus fulgidus]
Length = 123
Score = 92.8 bits (227), Expect = 6e-18
Identities = 51/114 (44%), Positives = 69/114 (59%), Gaps = 8/114 (7%)
Query: 293 DYEDYRGIKGYAEQTSGAYYAARLSVLEHLRKRKKQASAMVFREVTPAYYAPVGVWQVRI 352
D ED R + Y+ SG YYAARL VLE+LR+++ QAS +V RE+ P+YYAP+GVW V
Sbjct: 17 DSEDIRPKRDYSN-LSGGYYAARLPVLEYLREKRGQASVLVIREIKPSYYAPLGVWVVEE 75
Query: 353 GVKKALEGTPERFENLKEALGKIGSILEHPLEEYIAKSWLIRQLNQITIMSFLG 406
GV+KAL+ PE FE+ +AL +E+ K W Q ++ SF G
Sbjct: 76 GVRKALKSKPEVFESFDDALTAASRRVEN-------KEWRALVSRQTSLASFFG 122
>gi|11500036 hypothetical protein [Archaeoglobus fulgidus]
Length = 122
Score = 92.8 bits (227), Expect = 6e-18
Identities = 51/114 (44%), Positives = 69/114 (59%), Gaps = 8/114 (7%)
Query: 293 DYEDYRGIKGYAEQTSGAYYAARLSVLEHLRKRKKQASAMVFREVTPAYYAPVGVWQVRI 352
D ED R + Y+ SG YYAARL VLE+LR+++ QAS +V RE+ P+YYAP+GVW V
Sbjct: 16 DSEDIRPKRDYSN-LSGGYYAARLPVLEYLREKRGQASVLVIREIKPSYYAPLGVWVVEE 74
Query: 353 GVKKALEGTPERFENLKEALGKIGSILEHPLEEYIAKSWLIRQLNQITIMSFLG 406
GV+KAL+ PE FE+ +AL +E+ K W Q ++ SF G
Sbjct: 75 GVRKALKSKPEVFESFDDALTAASRRVEN-------KEWRALVSRQTSLASFFG 121
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.322 0.142 0.417
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 154830895
Number of Sequences: 2977
Number of extensions: 6757496
Number of successful extensions: 14078
Number of sequences better than 1.0e-10: 13
Number of HSP's better than 0.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 14029
Number of HSP's gapped (non-prelim): 13
length of query: 407
length of database: 189,106,746
effective HSP length: 54
effective length of query: 353
effective length of database: 156,788,448
effective search space: 55346322144
effective search space used: 55346322144
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.8 bits)
S2: 166 (69.1 bits)