BLASTP 2.0.10 [Aug-26-1999] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= PAB2062 (PAB2062) DE:Hypothetical protein (407 letters) Database: ./suso.pep; /banques/blast2/nr.pep 598,487 sequences; 189,106,746 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value pir||F75158 hypothetical protein PAB2062 - Pyrococcus abyssi (st... 819 0.0 pir||B71198 hypothetical protein PH1856 - Pyrococcus horikoshii ... 673 0.0 gb|AAK42853.1| Conserved hypothetical protein [Sulfolobus solfat... 281 1e-74 gi|11499185 A. fulgidus predicted coding region AF1590 [Archaeog... 271 9e-72 gb|AAK41160.1| Conserved hypothetical protein [Sulfolobus solfat... 243 3e-63 pir||H72502 hypothetical protein APE1998 - Aeropyrum pernix (str... 235 1e-60 emb|CAC12501.1| (AL445067) conserved hypothetical protein [Therm... 227 2e-58 pir||C69196 hypothetical protein MTH720 - Methanobacterium therm... 217 2e-55 gb|AAG18919.1| (AE004994) Vng0351c [Halobacterium sp. NRC-1] 215 7e-55 pir||A69418 hypothetical protein AF1346 - Archaeoglobus fulgidus... 194 2e-48 gi|11546069 hypothetical protein [Archaeoglobus fulgidus] 194 2e-48 pir||B69418 hypothetical protein AF1347 - Archaeoglobus fulgidus... 93 6e-18 gi|11500036 hypothetical protein [Archaeoglobus fulgidus] 93 6e-18 >pir||F75158 hypothetical protein PAB2062 - Pyrococcus abyssi (strain Orsay) >gi|5457859|emb|CAB49349.1| (AJ248284) hypothetical protein [Pyrococcus abyssi] Length = 407 Score = 819 bits (2092), Expect = 0.0 Identities = 407/407 (100%), Positives = 407/407 (100%) Query: 1 MIKVNSELCAICKGRKLLCGRPVCPILERFRIAREVAPLVSKEDVFGSSPPSVFVGEYGY 60 MIKVNSELCAICKGRKLLCGRPVCPILERFRIAREVAPLVSKEDVFGSSPPSVFVGEYGY Sbjct: 1 MIKVNSELCAICKGRKLLCGRPVCPILERFRIAREVAPLVSKEDVFGSSPPSVFVGEYGY 60 Query: 61 PRVRLGPLVPPIEGDTKYLDDPMRWENVKLEDILRYRSLLIMGQVKVHVDLRKSGRIIQE 120 PRVRLGPLVPPIEGDTKYLDDPMRWENVKLEDILRYRSLLIMGQVKVHVDLRKSGRIIQE Sbjct: 61 PRVRLGPLVPPIEGDTKYLDDPMRWENVKLEDILRYRSLLIMGQVKVHVDLRKSGRIIQE 120 Query: 121 VQELAMSSKPVDTEMLLKRKPTVKIIPSEFAPPIGPRGEVRKLEITENPKVPRDVDRIIG 180 VQELAMSSKPVDTEMLLKRKPTVKIIPSEFAPPIGPRGEVRKLEITENPKVPRDVDRIIG Sbjct: 121 VQELAMSSKPVDTEMLLKRKPTVKIIPSEFAPPIGPRGEVRKLEITENPKVPRDVDRIIG 180 Query: 181 DELKAKDAIISLYESGFDEYYIVRLLSVGLLGVRPKIVPTRWSITAVQDTIGSYLRKIVL 240 DELKAKDAIISLYESGFDEYYIVRLLSVGLLGVRPKIVPTRWSITAVQDTIGSYLRKIVL Sbjct: 181 DELKAKDAIISLYESGFDEYYIVRLLSVGLLGVRPKIVPTRWSITAVQDTIGSYLRKIVL 240 Query: 241 HFDVISQYEVYHSEFLGNRYVVLLLPRRYSFELLEVWLKGSLFGATKPIVIHDYEDYRGI 300 HFDVISQYEVYHSEFLGNRYVVLLLPRRYSFELLEVWLKGSLFGATKPIVIHDYEDYRGI Sbjct: 241 HFDVISQYEVYHSEFLGNRYVVLLLPRRYSFELLEVWLKGSLFGATKPIVIHDYEDYRGI 300 Query: 301 KGYAEQTSGAYYAARLSVLEHLRKRKKQASAMVFREVTPAYYAPVGVWQVRIGVKKALEG 360 KGYAEQTSGAYYAARLSVLEHLRKRKKQASAMVFREVTPAYYAPVGVWQVRIGVKKALEG Sbjct: 301 KGYAEQTSGAYYAARLSVLEHLRKRKKQASAMVFREVTPAYYAPVGVWQVRIGVKKALEG 360 Query: 361 TPERFENLKEALGKIGSILEHPLEEYIAKSWLIRQLNQITIMSFLGV 407 TPERFENLKEALGKIGSILEHPLEEYIAKSWLIRQLNQITIMSFLGV Sbjct: 361 TPERFENLKEALGKIGSILEHPLEEYIAKSWLIRQLNQITIMSFLGV 407 >pir||B71198 hypothetical protein PH1856 - Pyrococcus horikoshii >gi|3258294|dbj|BAA30977.1| (AP000007) 409aa long hypothetical protein [Pyrococcus horikoshii] Length = 409 Score = 673 bits (1718), Expect = 0.0 Identities = 304/407 (74%), Positives = 374/407 (91%) Query: 1 MIKVNSELCAICKGRKLLCGRPVCPILERFRIAREVAPLVSKEDVFGSSPPSVFVGEYGY 60 MIK+NS +CAICKGRKLLCGRPVCPILE+ RIAREV PLV++ED+FGSSPPSVFVGEYGY Sbjct: 1 MIKLNSNICAICKGRKLLCGRPVCPILEKIRIAREVTPLVNREDIFGSSPPSVFVGEYGY 60 Query: 61 PRVRLGPLVPPIEGDTKYLDDPMRWENVKLEDILRYRSLLIMGQVKVHVDLRKSGRIIQE 120 P+VR+GPLVPPIEGDT YLD+P++WEN ++ED++++RS+L++GQ +VH+DLR+S RII+E Sbjct: 61 PKVRIGPLVPPIEGDTSYLDNPLKWENARIEDVIKFRSILVLGQTRVHIDLRRSDRIIEE 120 Query: 121 VQELAMSSKPVDTEMLLKRKPTVKIIPSEFAPPIGPRGEVRKLEITENPKVPRDVDRIIG 180 +QELAMS KP+DTEMLLKRKP +K+IPSEFAPP+GP GEV+ EI ENPKVP+ V+R++G Sbjct: 121 LQELAMSIKPIDTEMLLKRKPILKVIPSEFAPPLGPSGEVKNFEIAENPKVPKKVERVVG 180 Query: 181 DELKAKDAIISLYESGFDEYYIVRLLSVGLLGVRPKIVPTRWSITAVQDTIGSYLRKIVL 240 DE+KAKDA+I+LYESGFDEYYI+RLLSVGLLG++P+IVPTRWSITAVQDT+G+YLRK +L Sbjct: 181 DEIKAKDAVITLYESGFDEYYIIRLLSVGLLGLKPRIVPTRWSITAVQDTLGNYLRKSIL 240 Query: 241 HFDVISQYEVYHSEFLGNRYVVLLLPRRYSFELLEVWLKGSLFGATKPIVIHDYEDYRGI 300 +F+ I YEVY SEFLGNRYV+LL+PRRYSFELLEVWLKGSLFG+ P+V+HD EDYRGI Sbjct: 241 NFEPIETYEVYTSEFLGNRYVILLMPRRYSFELLEVWLKGSLFGSEDPVVLHDCEDYRGI 300 Query: 301 KGYAEQTSGAYYAARLSVLEHLRKRKKQASAMVFREVTPAYYAPVGVWQVRIGVKKALEG 360 KGYAE+T+GAYYAARLSVLEHLR+RK+QASA+VFREVTPAYY PVGVWQ+R+GVKKALEG Sbjct: 301 KGYAEETTGAYYAARLSVLEHLRRRKRQASAIVFREVTPAYYTPVGVWQIRVGVKKALEG 360 Query: 361 TPERFENLKEALGKIGSILEHPLEEYIAKSWLIRQLNQITIMSFLGV 407 PE+F L++AL ++ L+HPLE Y+A+SW+++QLNQ +I SFLGV Sbjct: 361 IPEKFYTLEDALNRLRVKLKHPLERYLARSWILKQLNQRSITSFLGV 407 >gb|AAK42853.1| Conserved hypothetical protein [Sulfolobus solfataricus] Length = 397 Score = 281 bits (711), Expect = 1e-74 Identities = 157/394 (39%), Positives = 231/394 (57%), Gaps = 13/394 (3%) Query: 4 VNSELCAICKGRKLLCGRPVCPILERFRIAREVAPLVSKEDVFGSSPPSVFVGEYGYPRV 63 + ELC C+G K LCG CPI+ + R V+ ++V+GSSPPSVFVG + YP++ Sbjct: 2 IRPELCIRCRGAKYLCGLSYCPIIVNTKTVR-----VNFKEVYGSSPPSVFVGRFSYPKI 56 Query: 64 RLGPLVPPIEGDTKYLDDPMRWENVKLEDILRYRSLLIMGQVKVHVD-LRKSGRIIQEVQ 122 + P PPI GDT +D W N L + L R L+ G VK H D R R + ++Q Sbjct: 57 TVYPSAPPILGDTSKFEDSKYWLNADLSEFLSMRLSLVRGGVKYHKDDARLPDRFLLDIQ 116 Query: 123 ELAMSSKPVDTEMLLKRKPTVKIIPSEFAPPIGPRGEVRKLEITENPKVPRDVDRI-IGD 181 + +SS+PV+ ++ LKR P+ I+ E PP+GP + KLEI P V+++ + + Sbjct: 117 SITISSRPVELDLRLKRIPSGGIL-DESLPPLGPSAPLEKLEIATLPPPLAVVEKVYVDN 175 Query: 182 ELKAKDAIISLYESGFDEYYIVRLLSVGLLGVRPKIVPTRWSITAVQDTIGSYLRKIVLH 241 +++AKD I+ LY +G D I R+LS+G +G K+VPTRWSITAV I L + + + Sbjct: 176 DMRAKDGIMKLYNAGIDVEKISRILSIGGIGKERKLVPTRWSITAVDKAISDTLIENIKN 235 Query: 242 FDVISQYEVYHSEFLGNRYVVLLLPRRYSFELLEVWLKGSL---FGATKPIVIHDYEDYR 298 +D I + EVY ++ N ++ +LLPR +SFE E W GS FG I + D E Y Sbjct: 236 YDTIDKVEVYFRKYNKNLFIAILLPRDWSFEWGEAWYPGSTWNKFGNYVDIEV-DNERYH 294 Query: 299 GIKGYAEQTSGAYYAARLSVLEHLRKRKKQASAMVFREVTPAYYAPVGVWQVRIGVKKAL 358 G Y E G YYA+RL V E L RK+QA+A+++RE+ + PVGVW VR VK+ Sbjct: 295 GRSDYPE-IGGCYYASRLGVTEFLASRKRQATAILWREIYEGFNLPVGVWFVRENVKEMF 353 Query: 359 EGTPERFENLKEALGKIGSILEHPLEEYIAKSWL 392 +G P F+++ AL + +L L+++++KS L Sbjct: 354 KGKPVVFDDISTALNFVKRLLRSDLKQWLSKSLL 387 >gi|11499185 A. fulgidus predicted coding region AF1590 [Archaeoglobus fulgidus] >gi|7450484|pir||E69448 hypothetical protein AF1590 - Archaeoglobus fulgidus >gi|2648976|gb|AAB89664.1| (AE000993) A. fulgidus predicted coding region AF1590 [Archaeoglobus fulgidus] Length = 391 Score = 271 bits (686), Expect = 9e-72 Identities = 149/400 (37%), Positives = 239/400 (59%), Gaps = 14/400 (3%) Query: 9 CAICKGRKLLCGRPVCPILERFRIAREVAPLVSKE-DVFGSSPPSVFVGEYGYPRVRLGP 67 C C+GR +LC R VCP++ R P VS E D+ GSSPPSVFVG YGYP+VR+ P Sbjct: 3 CIECRGR-MLCSRKVCPLMPSLR------PQVSVERDILGSSPPSVFVGRYGYPKVRICP 55 Query: 68 LVPPIEGDTKYLDDPMRWENVKLEDILRYRSLLIMGQVKVHVDLRKSGRIIQEVQELAMS 127 VPP GDTK D P W V +E +L +R +I+GQ + D+R+S + ++ VQE+++ Sbjct: 56 AVPPFTGDTKIYDTPEMWREVPVERVLEFRYSMILGQFR--ADVRRS-KEVEVVQEMSLY 112 Query: 128 SKPVDTEMLLKRKPTVKIIPSEFAPPIGPRGEVRKLEITENPKVPRDVDRIIGD-ELKAK 186 KP+D E+ + P+V+ + PP G +++ I P+ P+ V+++ D +L+A Sbjct: 113 DKPIDVEVSFAKPPSVRAFFDDVLPPFGASAPAKEVIIHSAPRPPKAVEKVYYDTDLRAV 172 Query: 187 DAIISLYESGFDEYYIVRLLSVGLLGVRPKIVPTRWSITAVQDTIGSYLRKIVLHFDVIS 246 +A+ LYE G +I +LLS G LGV+ K+VPTRW+ITAV DT+ + + + ++ I Sbjct: 173 EAMSYLYERGVAVSHIQKLLSAGTLGVKRKLVPTRWAITAVDDTLSKQIIEEIKQYETID 232 Query: 247 QYEVYHSEFLGNRYVVLLLPRRYSFELLEVWLKGSLFGATKPI-VIHDYEDYRGIKGYAE 305 +Y V+ + N +V +L P +S+E E W + + T+ + V+ D E + G YA Sbjct: 233 RYRVFVLKESKNLFVAILCPSPWSYEWGEAWYPDTTWNRTRKVGVLTDSEGFFGRTTYA- 291 Query: 306 QTSGAYYAARLSVLEHLRKRKKQASAMVFREVTPAYYAPVGVWQVRIGVKKALEGTPERF 365 + G YY++RL+ E+LR+ ++QA+A+V+RE+ P + P+GVW VR ++K G F Sbjct: 292 RLGGCYYSSRLATAEYLRRIRRQATAIVWREIYPGFNVPIGVWFVREMLRKMYAGKYCEF 351 Query: 366 ENLKEALGKIGSILEHPLEEYIAKSWLIRQLNQITIMSFL 405 + L++AL + + +I KS L+++ Q T+ F+ Sbjct: 352 DTLEDALRFVDKHSNLDVGRWIEKSTLVKRGRQRTLWEFM 391 >gb|AAK41160.1| Conserved hypothetical protein [Sulfolobus solfataricus] Length = 408 Score = 243 bits (614), Expect = 3e-63 Identities = 148/417 (35%), Positives = 237/417 (56%), Gaps = 24/417 (5%) Query: 1 MIKVNSELCAICKGRKLLCGRPVCPILERFR----IAREVAPLVSKEDVFGSSPPSVFVG 56 M K+ +ELC CK K LCG P CPI+ERFR +++ S + V GS+PPS VG Sbjct: 1 MHKIPAELCIKCKSHKNLCGLPYCPIMERFRGMVSSLQKIEIDTSFKLVEGSTPPSGIVG 60 Query: 57 EYGYPRVRLGPLVPPIEGDTKYLDDPMRWENVK-------LEDILRYRSLLIMGQVKVHV 109 E GYP+V L +PP + Y +D ++ENVK L DI++ RS LI V V Sbjct: 61 EKGYPKVSLIVNIPP----SVYGEDARKYENVKEWWGRINLGDIIKLRSSLISSITTVKV 116 Query: 110 DLRKSGRIIQEVQELAMSSKPVDTEMLLKRKPTVKIIPSEFAPPIGPRGEVRKLEITENP 169 + + + E+ +S P+ TE LK K+ P GP G ++++ +NP Sbjct: 117 E-KATEYYDTEIPLAIISDNPIVTEAKLKTLEA-KLKFDGVILPRGPSGIAEQIKVLDNP 174 Query: 170 KVPRDVDRIIGDELKAKDAIISLYESGFDEYYIVRLLSVGLLGVRP--KIVPTRWSITAV 227 KVP +D++I D+ K+ +AI+ LY D Y I+ LS GLLG + + VPTRW+ITAV Sbjct: 175 KVPTKLDKLIFDDAKSTEAILELYRYNVDYYKIIHALSFGLLGRKKNRRFVPTRWAITAV 234 Query: 228 QDTIGSYLRKIVLHFDVISQYEVYHSEFLGNRYVVLLLPRRYSFELLEVWLKGSLFGATK 287 +G +L +++++ I++ EVYHS +LGN + V+L P +++ +E+W SL+ ++ Sbjct: 235 DSIVGKFLYNKIINYNEINEIEVYHSSYLGNYFYVILYPSKFNSTWIEIWHPLSLW--SQ 292 Query: 288 PIVIHDYEDYRGIKGYAEQTSGAYYAARLSVLEHLRKRKKQASAMVFREVTPAYYAPVGV 347 + I + ++ G E G Y AARL+VLEHL + K+Q+ ++ RE+T Y+APVG Sbjct: 293 ELTISELKE--NFWGEYEYLDGGYMAARLAVLEHLEQIKRQSGIIIIREITEEYFAPVGN 350 Query: 348 WQVRIGVKKALEGTPERFENLKEALGKIGSILEHPLEEYIAKSWLIRQLNQITIMSF 404 W +R V+ A++ +++NL A+ ++ L+ + + ++ + +NQ +I F Sbjct: 351 WHIRETVRNAMKNRLGKYDNLNLAISEVNKKLKAKINLFELRT-INSLINQKSIYDF 406 >pir||H72502 hypothetical protein APE1998 - Aeropyrum pernix (strain K1) >gi|5105696|dbj|BAA81008.1| (AP000063) 410aa long hypothetical protein [Aeropyrum pernix] Length = 410 Score = 235 bits (592), Expect = 1e-60 Identities = 142/373 (38%), Positives = 215/373 (57%), Gaps = 16/373 (4%) Query: 1 MIKVNSELCAICKGRKLLCGRPVCPILERFRI-AREVAPLVSKEDVFGSSPPSVFVGEYG 59 M ++ ELC CKG +LLCG P CPIL+R R AR + +V GS+PPS+ VGE G Sbjct: 1 MPRIPPELCTRCKGYRLLCGLPSCPILDRLRSQARSLERARWSREVQGSTPPSILVGERG 60 Query: 60 YPRVRLGPLVPP-IEG-DTKYLDDPMRWENVK--LEDILRYRSLLIMGQVKVHVDLRKSG 115 YP VRL +VPP + G + + +DP+ W + + L I+R RS L+ G ++ D R+ Sbjct: 61 YPGVRLYYMVPPGVAGPEAQRYEDPLGWRSSRTPLGSIVRLRSELVAGVLRA--DARRPH 118 Query: 116 RII--QEVQELAMSSKPVDTEMLLKRKPTVKIIPSEFAPPIGPRGEVRKLEITENPKVPR 173 ++ +E+ A+S +PVD+ + L R P ++ + P+GP R++E+ NP++ + Sbjct: 119 ELLYQREIGPAALSERPVDSFLELARLPVPRVSFDGYTKPVGPTAPARRVEVEGNPRLEK 178 Query: 174 DVDRIIGDELKAKDAIISLYESGFDEYYIVRLLSVGLLG--VRPKIVPTRWSITAVQDTI 231 V+R I ++ KA+ L+ G + Y I R LS+G LG ++VPTRW+ITAV + + Sbjct: 179 PVERAIWEDEKAEVMAWELFNRGVNVYTIQRALSIGFLGRLRARRLVPTRWAITAVDEML 238 Query: 232 GSYLRKIVLHFDVISQYEVYHSEFLGNRYVVLLLPRRYSFELLEVWLKGSLF--GATKPI 289 LR+++ I EVY SE+L NR++++L P E +E+W +++ GA P+ Sbjct: 239 SRRLRRLLKTAPEIGGVEVYFSEYLHNRFLIILKPGPGWMEWIEIWHPHTVWTPGAGGPV 298 Query: 290 VIHDYEDYRGIKGYAEQTSGAYYAARLSVLEHLRKRKKQASAMVFREVTPAYYAPVGVWQ 349 ED G K + G + AA+L VLEHL R ++A ++ REV P YYAPVG W Sbjct: 299 ASVVREDPLGRKNMED---GGFSAAKLPVLEHLYSRGRRADVIIVREVLPQYYAPVGNWH 355 Query: 350 VRIGVKKALEGTP 362 +R VK AL P Sbjct: 356 IRETVKHALAQKP 368 >emb|CAC12501.1| (AL445067) conserved hypothetical protein [Thermoplasma acidophilum] Length = 421 Score = 227 bits (573), Expect = 2e-58 Identities = 135/414 (32%), Positives = 221/414 (52%), Gaps = 11/414 (2%) Query: 2 IKVNSELCAICKGRKLLCGRPVCPILERFRIAREVAPLVSKEDVFGSSPPSVFVGEYGYP 61 + + + LC C+G K LCG CPI +++ + +++ GSSPPSVFVG YGYP Sbjct: 11 MSIPASLCMRCRGAKRLCGLSYCPIEIEMITRSKISGRSNIKEIDGSSPPSVFVGRYGYP 70 Query: 62 RVRLGPLVPPIEGDTKYLDDPMRWENVKLEDILRYRSLLIMGQVKVHVDLR-KSGRIIQE 120 +V + P PPI GDT L W ++ LE+ + R ++ G + VD ++Q Sbjct: 71 KVSVYPSAPPIRGDTSNLSVSASWLDMPLEEFISARLSMLRGSREFAVDAAVDPDALLQR 130 Query: 121 VQELAMSSKPVDTEMLLKRK-PTVKIIPSEFAPPIGPRGEVRKLEITENPKVPRDVDRII 179 +QE+++S VD ++LL+R T KI + P+GP ++ + + + ++++ Sbjct: 131 IQEISLSKGSVDVDILLERPIDTSKIEIDDHVTPMGPASPMKTFSL-DPSGTEQHIEKVY 189 Query: 180 GD-ELKAKDAIISLYESGFDEYYIVRLLSVGLL--GVRPKIVPTRWSITAVQDTIGSYLR 236 D ++KAKDA++ LYE+G D I + LSVG++ G KIVPTRWSITAV I L Sbjct: 190 YDTDMKAKDAVMKLYENGIDIERISQSLSVGIMGEGKNRKIVPTRWSITAVDSMISDDLI 249 Query: 237 KIVLHFDVISQYEVYHSEFLGNRYVVLLLPRRYSFELLEVWLKGS---LFGATKPIVIHD 293 + I ++ Y GN ++ +L P + +E E W GS ++G + I D Sbjct: 250 EEAKQRPTIDKFLAYRMRVNGNYFMAILTPSNWIYEWGESWFPGSTWNMWGNQAEVEI-D 308 Query: 294 YEDYRGIKGYAEQTSGAYYAARLSVLEHLRKRKKQASAMVFREVTPAYYAPVGVWQVRIG 353 YE Y G K Y + G YY++R++V E +K + A+ +RE+ P + PVGVW VR Sbjct: 309 YEGYNGRKTYPD-IGGCYYSSRVAVGEAFKKLGRSGGAITWREIYPGFNIPVGVWFVREN 367 Query: 354 VKKALEGTPERFENLKEALGKIGSILEHPLEEYIAKSWLIRQLNQITIMSFLGV 407 +++ PE F+ + EA+ + + P E++ + S++ + L + F + Sbjct: 368 MRRLFAQKPEVFDTIDEAMNYVSEWMRVPPEKWKSNSYVYKTLKYNNLERFFSL 421 >pir||C69196 hypothetical protein MTH720 - Methanobacterium thermoautotrophicum (strain Delta H) >gi|2621808|gb|AAB85225.1| (AE000851) unknown [Methanobacterium thermoautotrophicum] Length = 388 Score = 217 bits (546), Expect = 2e-55 Identities = 132/371 (35%), Positives = 219/371 (58%), Gaps = 19/371 (5%) Query: 43 EDVFGSSPPSVFVGEYGYPRVRLGPLVPPIEGDTKYLDDPMRW--ENVKLEDILRYRSLL 100 E++ G++PPSVF+G + YP+V GP++ P++ + + D P RW E E+I+ YR L Sbjct: 26 EELEGATPPSVFIGSWNYPKVYAGPMIAPVQEEVEIFDSPERWIPERKTQEEIIDYRLNL 85 Query: 101 IMGQVKVHV-DLRKSGRIIQEVQELAMSSKPVDTEMLLKRKPTVKIIPSEFAPPIGPRGE 159 + G+ V V DL +++++QE+++SS +++E +RKP + SE P GP Sbjct: 86 VRGKQLVGVRDL--DNHLVEKLQEISLSSGAIESEAQFRRKPR-GLFFSEEQTPHGPSAV 142 Query: 160 VRKLEITENPKVPRDVDRIIGD-ELKAKDAIISLYESGFDEYYIVRLLSVGLLGV--RPK 216 + EI EN K R+++R D +L+A++AI+ L+ G + + LSVG LG R K Sbjct: 143 LENFEI-ENVKWDRELERAYHDTDLRAREAIVELHRKGTPFSAVQKALSVGALGEGKRRK 201 Query: 217 IVPTRWSITAVQDTIGSYLRKIVLHFDVISQYEVYHSEFLGNRYVVLLLPRRYSFELLEV 276 +VPTRWSITA T+ + + VL ++ I + V+ E L N Y++LL P + +E +E Sbjct: 202 LVPTRWSITACDSTLADHFLERVLEYEPIDTFRVHEFESLKNHYLILLTPSEWQYEWMEA 261 Query: 277 WLKGSLFGATKPIVIHDYEDYRGIKGYAEQTSGAYYAARLSVLEHLRKRKKQASAMVFRE 336 ++K + ++ D+E +G + Y+ + G YY+A+++VL+ L + +KQA A++ RE Sbjct: 262 FMKRD----GRAMIFSDHETGKGKREYS-RVGGCYYSAKMAVLDALDREEKQAGAIILRE 316 Query: 337 VTPAYYAPVGVWQVRIGVKKALEGTPERFENLKEALGKIGSILEHPLEEYIAKSWLIRQL 396 P Y P+GV+ VR VK A++ P F +L+ AL I S L+ LE + +S L+++L Sbjct: 317 AYPG-YVPLGVFNVRENVKNAMDTEPTMFNDLRGALEFIDSKLKLGLEAFRVRSNLLKEL 375 Query: 397 ---NQITIMSF 404 Q T+ SF Sbjct: 376 EVSRQTTLDSF 386 >gb|AAG18919.1| (AE004994) Vng0351c [Halobacterium sp. NRC-1] Length = 429 Score = 215 bits (542), Expect = 7e-55 Identities = 138/381 (36%), Positives = 207/381 (54%), Gaps = 25/381 (6%) Query: 32 IAREVAPLVSKEDVFGSSPPSVFVGEYGYPRVRLGPLVPPIEGDTKYLDDPMRW------ 85 + + V + + + G++ PSVFVG YP V G ++ P+ GD DP + Sbjct: 44 VEQGVTEALQGDTLVGATAPSVFVGRSAYPDVSAG-ILSPVAGDA----DPAEFATSGEW 98 Query: 86 --ENVKLEDILRYRSLLIMGQVKVHVDLRKS-GRIIQEVQELAMSSKPVDTEMLLKRKPT 142 + + ++++L+YR+ L+ + +V++ + +E+AM+ +PVD E+ L PT Sbjct: 99 YQQGLGIDNVLQYRTGLLNSRRAANVNVHDVWDGFVGTQREVAMADRPVDVEIGLSDAPT 158 Query: 143 VK----IIPSEFAPPIGPRGEVRKLEITENPKVPRDVDRIIGDE-LKAKDAIISLYESGF 197 P+ AP GP + ENP VPR V++ + D+ A+ A+ LY G Sbjct: 159 FDREEYTSPAANAPS-GPNASAESAALGENPHVPRYVEKTLADDDWAAEGAMTYLYRRGL 217 Query: 198 DEYYIVRLLSVGLLGV--RPKIVPTRWSITAVQDTIGSYLRKIVLHFDVISQYEVYHSEF 255 D Y I R+LSVG LG ++VPTRWSITAV DT+G YLR + + + V+ +E+ Sbjct: 218 DVYQINRVLSVGALGQGHHRRLVPTRWSITAVDDTVGQYLRGTIRDAPSVDEVTVHVNEY 277 Query: 256 LGNRYVVLLLPRRYSFELLEVWLKGSLFGATKP---IVIHDYEDYRGIKGYAEQTSGAYY 312 +GNRY V+L P R+ EL+E+ GS++ + E Y G GY ++T+GAYY Sbjct: 278 MGNRYWVVLAPGRWEHELVEMKAPGSIWNPDPGGDLWMAAASEGYEGRTGYVDETAGAYY 337 Query: 313 AARLSVLEHLRKRKKQASAMVFREVTPAYYAPVGVWQVRIGVKKALEGTPERFENLKEAL 372 AARL VLEHL +QA A+V REV+ Y+APVGVWQVR V+ A +G P E A+ Sbjct: 338 AARLGVLEHLSDIGRQAKALVLREVSDDYWAPVGVWQVRESVRNAFDGQPGEAETFHGAV 397 Query: 373 GKIGSILEHPLEEYIAKSWLI 393 +I L L KS ++ Sbjct: 398 AEISDHLPVSLAALRRKSDMV 418 >pir||A69418 hypothetical protein AF1346 - Archaeoglobus fulgidus >gi|2649242|gb|AAB89912.1| (AE001011) A. fulgidus predicted coding region AF1346 [Archaeoglobus fulgidus] Length = 288 Score = 194 bits (487), Expect = 2e-48 Identities = 103/278 (37%), Positives = 165/278 (59%), Gaps = 11/278 (3%) Query: 9 CAICKGRKLLCGRPVCPILERFRIAREVAPLVSKEDVFGSSPPSVFVGEYGYPRVRLGPL 68 CA CKG KLLCGR CP+LE++R +E+ + SPPS+FVG GYP+V GPL Sbjct: 6 CAECKG-KLLCGRSKCPLLEKYRFLKEIK---IDSRILDPSPPSIFVGRVGYPKVYAGPL 61 Query: 69 VPPIEGDTKYLDDPMRWENVKLEDILRYRSLLIMGQVKVHV-DLRKSGRIIQEVQELAMS 127 V I D Y D P W+++ E+++R R+ ++ + V D+R+ + + E+QE+ + Sbjct: 62 VS-INADPVYADSPWLWKSI--EEVIRLRTSMLRVSRRFRVEDVREEKKELTEMQEMTAA 118 Query: 128 SKPVDTEMLLKRKPTVKIIPSEFAPPIGPRGEVRKLEITENPKVPRDVDRIIGDELKAKD 187 KPVD E + RK + K + P+G +++ ENPK+P V+++ D++KA + Sbjct: 119 IKPVDVEAEI-RKISRKAEFDDVMQPMGYSAIAESIKLAENPKIPDKVEKVYYDDMKAYE 177 Query: 188 AIISLYESGFDEYYIVRLLSVGLLGVRP--KIVPTRWSITAVQDTIGSYLRKIVLHFDVI 245 A+ LY GF YY+ ++ S G+LG R K+VPTRWSITAV +G +++ + + I Sbjct: 178 ALSYLYNHGFSTYYLQKIFSAGILGERKSRKLVPTRWSITAVHSIVGEAIKREIAAYKPI 237 Query: 246 SQYEVYHSEFLGNRYVVLLLPRRYSFELLEVWLKGSLF 283 + +++ E GN + V+L P Y F+L+E+W + S + Sbjct: 238 DKTLLFNYEHFGNHFEVILSPENYFFQLVEIWQRKSFW 275 >gi|11546069 hypothetical protein [Archaeoglobus fulgidus] Length = 284 Score = 194 bits (487), Expect = 2e-48 Identities = 103/278 (37%), Positives = 165/278 (59%), Gaps = 11/278 (3%) Query: 9 CAICKGRKLLCGRPVCPILERFRIAREVAPLVSKEDVFGSSPPSVFVGEYGYPRVRLGPL 68 CA CKG KLLCGR CP+LE++R +E+ + SPPS+FVG GYP+V GPL Sbjct: 6 CAECKG-KLLCGRSKCPLLEKYRFLKEIK---IDSRILDPSPPSIFVGRVGYPKVYAGPL 61 Query: 69 VPPIEGDTKYLDDPMRWENVKLEDILRYRSLLIMGQVKVHV-DLRKSGRIIQEVQELAMS 127 V I D Y D P W+++ E+++R R+ ++ + V D+R+ + + E+QE+ + Sbjct: 62 VS-INADPVYADSPWLWKSI--EEVIRLRTSMLRVSRRFRVEDVREEKKELTEMQEMTAA 118 Query: 128 SKPVDTEMLLKRKPTVKIIPSEFAPPIGPRGEVRKLEITENPKVPRDVDRIIGDELKAKD 187 KPVD E + RK + K + P+G +++ ENPK+P V+++ D++KA + Sbjct: 119 IKPVDVEAEI-RKISRKAEFDDVMQPMGYSAIAESIKLAENPKIPDKVEKVYYDDMKAYE 177 Query: 188 AIISLYESGFDEYYIVRLLSVGLLGVRP--KIVPTRWSITAVQDTIGSYLRKIVLHFDVI 245 A+ LY GF YY+ ++ S G+LG R K+VPTRWSITAV +G +++ + + I Sbjct: 178 ALSYLYNHGFSTYYLQKIFSAGILGERKSRKLVPTRWSITAVHSIVGEAIKREIAAYKPI 237 Query: 246 SQYEVYHSEFLGNRYVVLLLPRRYSFELLEVWLKGSLF 283 + +++ E GN + V+L P Y F+L+E+W + S + Sbjct: 238 DKTLLFNYEHFGNHFEVILSPENYFFQLVEIWQRKSFW 275 >pir||B69418 hypothetical protein AF1347 - Archaeoglobus fulgidus >gi|2649246|gb|AAB89916.1| (AE001011) A. fulgidus predicted coding region AF1347 [Archaeoglobus fulgidus] Length = 123 Score = 92.8 bits (227), Expect = 6e-18 Identities = 51/114 (44%), Positives = 69/114 (59%), Gaps = 8/114 (7%) Query: 293 DYEDYRGIKGYAEQTSGAYYAARLSVLEHLRKRKKQASAMVFREVTPAYYAPVGVWQVRI 352 D ED R + Y+ SG YYAARL VLE+LR+++ QAS +V RE+ P+YYAP+GVW V Sbjct: 17 DSEDIRPKRDYSN-LSGGYYAARLPVLEYLREKRGQASVLVIREIKPSYYAPLGVWVVEE 75 Query: 353 GVKKALEGTPERFENLKEALGKIGSILEHPLEEYIAKSWLIRQLNQITIMSFLG 406 GV+KAL+ PE FE+ +AL +E+ K W Q ++ SF G Sbjct: 76 GVRKALKSKPEVFESFDDALTAASRRVEN-------KEWRALVSRQTSLASFFG 122 >gi|11500036 hypothetical protein [Archaeoglobus fulgidus] Length = 122 Score = 92.8 bits (227), Expect = 6e-18 Identities = 51/114 (44%), Positives = 69/114 (59%), Gaps = 8/114 (7%) Query: 293 DYEDYRGIKGYAEQTSGAYYAARLSVLEHLRKRKKQASAMVFREVTPAYYAPVGVWQVRI 352 D ED R + Y+ SG YYAARL VLE+LR+++ QAS +V RE+ P+YYAP+GVW V Sbjct: 16 DSEDIRPKRDYSN-LSGGYYAARLPVLEYLREKRGQASVLVIREIKPSYYAPLGVWVVEE 74 Query: 353 GVKKALEGTPERFENLKEALGKIGSILEHPLEEYIAKSWLIRQLNQITIMSFLG 406 GV+KAL+ PE FE+ +AL +E+ K W Q ++ SF G Sbjct: 75 GVRKALKSKPEVFESFDDALTAASRRVEN-------KEWRALVSRQTSLASFFG 121 Database: ./suso.pep Posted date: Jul 6, 2001 5:57 PM Number of letters in database: 840,471 Number of sequences in database: 2977 Database: /banques/blast2/nr.pep Posted date: Dec 14, 2000 12:46 PM Number of letters in database: 188,266,275 Number of sequences in database: 595,510 Lambda K H 0.322 0.142 0.417 Gapped Lambda K H 0.270 0.0470 0.230 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 154830895 Number of Sequences: 2977 Number of extensions: 6757496 Number of successful extensions: 14078 Number of sequences better than 1.0e-10: 13 Number of HSP's better than 0.0 without gapping: 8 Number of HSP's successfully gapped in prelim test: 5 Number of HSP's that attempted gapping in prelim test: 14029 Number of HSP's gapped (non-prelim): 13 length of query: 407 length of database: 189,106,746 effective HSP length: 54 effective length of query: 353 effective length of database: 156,788,448 effective search space: 55346322144 effective search space used: 55346322144 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.8 bits) X3: 64 (24.9 bits) S1: 41 (21.8 bits) S2: 166 (69.1 bits)