BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB2068 (drrA-2) DE:daunorubicin resistance ATP-binding protein
(drrA-2)
(318 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||H75157 daunorubicin resistance ATP-binding protein (drra-2)... 632 e-180
pir||C71197 probable ATP-binding transport protein - Pyrococcus ... 553 e-156
pir||E75108 daunorubicin resistance ATP-binding protein (drra-1)... 270 2e-71
pir||D72484 probable ATP-binding protein APE2516 - Aeropyrum per... 270 2e-71
gi|11499468 daunorubicin resistance ATP-binding protein (drrA) [... 265 7e-70
pir||C71081 probable resistance ATP-binding protein - Pyrococcus... 254 1e-66
pir||D72257 hypothetical protein TM1403 - Thermotoga maritima (s... 251 7e-66
pir||C69012 ABC transporter (ATP-binding, daunorubicin resistanc... 248 8e-65
pir||S74048 probable daunorubicin resistance protein - Sulfolobu... 240 2e-62
gb|AAK42315.1| ABC transporter, ATP binding protein. [Sulfolobus... 240 2e-62
pir||G71131 probable ATP-binding protein - Pyrococcus horikoshii... 238 8e-62
emb|CAC11998.1| (AL445065) ABC transporter related protein [Ther... 228 9e-59
pir||C72568 probable ATP-binding transport protein APE1829 - Aer... 227 2e-58
dbj|BAB05817.1| (AP001514) ABC transporter (ATP-binding protein)... 226 3e-58
pir||E75122 hypothetical protein PAB1845 - Pyrococcus abyssi (st... 225 5e-58
pir||D72492 probable ABC transporter ATP-binding protein APE2579... 220 1e-56
pir||C69049 ABC transporter (ATP-binding protein) - Methanobacte... 217 2e-55
dbj|BAB04773.1| (AP001510) transposase (08)/ABC transporter (ATP... 215 4e-55
dbj|BAA83955.1| (AB024563) YFIL [Bacillus halodurans] 215 7e-55
pir||H71008 probable ATP-binding transport protein - Pyrococcus ... 212 5e-54
pir||G69803 ABC transporter (ATP-binding protein) homolog yfiL -... 209 3e-53
dbj|BAA95019.1| (AB033992) ATP-binding protein [Streptomyces kas... 208 5e-53
gb|AAK42768.1| ABC transporter, ATP binding protein [Sulfolobus ... 202 5e-51
gi|11498898 ABC transporter, ATP-binding protein [Archaeoglobus ... 199 3e-50
pir||B71030 probable ATP-binding transport protein - Pyrococcus ... 198 1e-49
pir||A75184 ATP-binding transport protein PAB0434 - Pyrococcus a... 197 1e-49
dbj|BAB07612.1| (AP001520) ABC transporter (ATP-binding protein)... 194 2e-48
pir||B69065 ABC transporter (ATP-binding, daunorubicin resistanc... 190 1e-47
pir||S76278 ABC-type transport protein sll0759 - Synechocystis s... 188 9e-47
emb|CAC08315.1| (AL392149) putative ABC transport system ATP-bin... 186 3e-46
gi|11498736 ABC transporter, ATP-binding protein [Archaeoglobus ... 184 1e-45
pir||E72364 ABC transporter, ATP-binding protein - Thermotoga ma... 183 2e-45
emb|CAB37661.1| (AJ224479) cdd4-like protein [Bacillus sphaericus] 183 2e-45
gb|AAG32068.1|AF317790_1 (AF317790) ATP-binding transporter AviA... 183 3e-45
pir||F82303 ABC transporter, ATP-binding protein VC0589 [importe... 182 6e-45
pir||S76626 ABC-type transport protein sll0489 - Synechocystis s... 180 1e-44
sp|P54592|YHCH_BACSU HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 180 1e-44
gb|AAC44357.1| (U43537) ATP-binding protein involved in mithramy... 178 1e-43
pir||C70529 probable ABC transporter - Mycobacterium tuberculosi... 177 1e-43
sp|P46903|NATA_BACSU ATP-BINDING TRANSPORT PROTEIN NATA (NA+ ABC... 177 2e-43
pir||E69771 ABC transporter (ATP-binding protein) homolog ydbJ -... 175 5e-43
pir||T36344 probable ABC-type transport system ATP-binding prote... 175 8e-43
pir||A70194 ABC transporter, ATP-binding protein homolog - Lyme ... 174 1e-42
pir||E72384 ABC transporter, ATP-binding protein - Thermotoga ma... 174 1e-42
pir||T36505 probable ABC-type transport system ATP-binding compo... 174 1e-42
pir||C72303 ABC transporter, ATP-binding protein - Thermotoga ma... 174 1e-42
sp|P32010|DRRA_STRPE DAUNORUBICIN RESISTANCE ATP-BINDING PROTEIN... 173 2e-42
emb|CAA75761.1| (Y15759) ORF1 [Streptomyces rochei] 173 3e-42
emb|CAB88835.1| (AL353832) putative ABC-transport protein, ATP-b... 171 1e-41
emb|CAC11370.1| (AL445063) gliding motility protein related [The... 171 1e-41
gb|AAF99566.1| (AF167161) unknown [Staphylococcus aureus] 171 1e-41
pir||T36741 probable ABC-type transport system ATP-binding prote... 169 3e-41
pir||B83294 probable ATP-binding component of ABC transporter PA... 168 6e-41
pir||T44443 gliding motility protein [imported] - Flavobacterium... 168 8e-41
pir||B75459 sodium extrusion protein NatA - Deinococcus radiodur... 168 1e-40
sp|P55476|NODI_RHISN NODULATION ATP-BINDING PROTEIN I >gi|218242... 167 1e-40
sp|P22040|Y415_SYNY3 HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 167 1e-40
sp|P42332|BCRA_BACLI BACITRACIN TRANSPORT ATP-BINDING PROTEIN BC... 167 2e-40
dbj|BAB06933.1| (AP001518) ABC transporter (ATP-binding protein)... 166 2e-40
gi|11498611 ABC transporter, ATP-binding protein [Archaeoglobus ... 166 3e-40
pir||T50566 probable ABC-type transport protein, ATP-binding com... 165 7e-40
sp|P72335|NODI_RHIS3 NODULATION ATP-BINDING PROTEIN I >gi|153162... 164 9e-40
dbj|BAB07698.1| (AP001520) ABC transporter (ATP-binding protein)... 164 9e-40
pir||S77512 ABC-type transport protein slr1901 - Synechocystis s... 164 1e-39
pir||S32908 hypothetical protein 4 - Streptomyces antibioticus >... 164 1e-39
gb|AAK42548.1| ABC transporter, ATP binding protein [Sulfolobus ... 163 2e-39
pir||S73019 daunorubicin resistance protein drrA - Mycobacterium... 163 2e-39
pir||H71066 probable ATP-binding transport protein - Pyrococcus ... 163 2e-39
gb|AAC72253.1| (U91581) LctF [Lactococcus lactis subsp. lactis] 162 4e-39
gb|AAD44229.1|AF143772_35 (AF143772) DrrA [Mycobacterium avium] 162 5e-39
pir||T31682 bcrA protein - Bacillus licheniformis >gi|4464278|gb... 162 6e-39
pir||H75077 abc transporter, ATP-binding protein PAB1696 - Pyroc... 162 6e-39
sp|P50332|NODI_RHIGA NODULATION ATP-BINDING PROTEIN I >gi|100191... 161 8e-39
pir||H72269 ABC transporter, ATP-binding protein - Thermotoga ma... 161 8e-39
emb|CAB76006.1| (AL157916) putative ABC transporter, ATP-binding... 161 1e-38
gb|AAK40417.1| ABC transporter, ATP binding protein [Sulfolobus ... 160 2e-38
pir||S75436 hypothetical protein c05019 - Sulfolobus solfataricu... 160 2e-38
pir||B72334 ABC transporter, ATP-binding protein - Thermotoga ma... 160 2e-38
gb|AAD20382.1| (AF125999) daunorubicin resistance protein A [Myc... 159 3e-38
dbj|BAB04164.1| (AP001508) ABC transporter (ATP-binding protein)... 159 3e-38
emb|CAC08414.1| (AL392178) putative ABC transport system ATP-bin... 159 3e-38
pir||B64816 ABC-type transport protein ybhF - Escherichia coli >... 159 4e-38
sp|P75776|YBHF_ECOLI HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 159 4e-38
gb|AAG20087.1| (AE005088) ABC transport protein; Trp2 [Halobacte... 159 4e-38
pir||JN0849 hypothetical 35K protein - Streptomyces lividans >gi... 158 7e-38
pir||JC5348 cdd4 protein - Clostridium difficile >gi|1770140|emb... 158 7e-38
emb|CAC08286.1| (AL392148) putative ABC transporter ATP-binding ... 158 7e-38
emb|CAB60255.1| (AJ250862) MrsF protein [Bacillus sp. HIL-Y85/54... 157 1e-37
sp|P36879|YADG_ECOLI HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 156 3e-37
gb|AAG19180.1| (AE005015) ABC transporter, ATP-binding protein; ... 156 4e-37
pir||S72783 probable ABC-type transport protein B1496_F3_97 - My... 156 4e-37
pir||T09008 cdd4-like protein ScnF - Streptococcus pyogenes >gi|... 155 8e-37
pir||B75076 daunorubicin resistance ATP-binding protein drra PAB... 155 8e-37
sp|P08720|NODI_RHILV NODULATION ATP-BINDING PROTEIN I >gi|78028|... 154 1e-36
pir||A83142 probable ATP-binding component of ABC transporter PA... 154 1e-36
pir||D70984 probable drrA protein - Mycobacterium tuberculosis (... 153 2e-36
gi|11498626 ABC transporter, ATP-binding protein [Archaeoglobus ... 153 2e-36
pir||F75377 ABC transporter, ATP-binding protein - Deinococcus r... 153 2e-36
emb|CAB94554.1| (AL359152) putative ABC transporter, ATP-binding... 153 2e-36
sp|P23703|NODI_RHILO NODULATION ATP-BINDING PROTEIN I >gi|95215|... 153 3e-36
gb|AAD16030.1| (AF082183) ABC transporter MutF [Streptococcus mu... 153 3e-36
sp|P26050|NODI_BRAJA NODULATION ATP-BINDING PROTEIN I >gi|281683... 152 4e-36
prf||1914270A nodulation protein [Bradyrhizobium japonicum] 152 4e-36
pir||E70871 hypothetical protein Rv1458c - Mycobacterium tubercu... 151 9e-36
pir||H75288 ABC transporter, ATP-binding protein - Deinococcus r... 151 9e-36
pir||T18288 ABC transport protein - slime mold (Dictyostelium di... 150 2e-35
pir||G75548 ABC transporter, ATP-binding protein - Deinococcus r... 150 3e-35
dbj|BAB10070.1| (AB010069) contains similarity to ABC transporte... 148 6e-35
pir||A39025 probable membrane protein, cpn60 5'-region - Synecho... 148 8e-35
pir||A70082 ABC transporter (ATP-binding protein) homolog yxlF -... 147 2e-34
gb|AAG20473.1| (AE005119) copper transport ATP-binding protein; ... 147 2e-34
gb|AAA21451.1| (U01058) ABC family transporter [Entamoeba histol... 146 3e-34
pir||T07717 probable ABC-type transport protein T23J7.110 - Arab... 146 4e-34
dbj|BAB10074.1| (AB010069) contains similarity to ABC transporte... 146 4e-34
pir||C75593 probable ABC transporter, ATP-binding protein - Dein... 145 7e-34
pir||G82707 ABC transporter ATP-binding protein XF1223 [imported... 145 7e-34
pir||T07713 probable ABC-type transport protein T23J7.70 - Arabi... 144 1e-33
emb|CAC11986.1| (AL445065) ABC transporter cdd4-like protein Scn... 144 1e-33
gb|AAC02761.2| (AC002339) putative ABC transporter [Arabidopsis ... 144 2e-33
dbj|BAB04537.1| (AP001509) bacitracin ABC transporter (ATP-bindi... 144 2e-33
gb|AAC80570.1| (AF105431) NodI [Bradyrhizobium sp. SNU001] 143 3e-33
pir||T36000 probable ABC-type transport system ATP-binding chain... 143 3e-33
gb|AAK43268.1| ABC transporter, ATP binding protein related prot... 142 6e-33
pir||T00826 hypothetical protein T32G6.22 - Arabidopsis thaliana... 142 6e-33
dbj|BAB10073.1| (AB010069) contains similarity to ABC transporte... 142 6e-33
emb|CAC11779.1| (AL445064) daunorubicin resistance protein relat... 141 8e-33
emb|CAB93668.1| (AJ276653) RumF protein [Ruminococcus gnavus] 141 1e-32
pir||S47705 hypothetical protein f648 - Escherichia coli >gi|912... 141 1e-32
sp|P37624|YHIH_ECOLI HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 141 1e-32
pir||C83188 probable ATP-binding component of ABC transporter PA... 141 1e-32
gi|6005701 ATP-binding cassette, sub-family A member 8 [Homo sap... 140 2e-32
gb|AAC17172.1| (AF065141) ABC transporter ATP-binding protein ho... 140 2e-32
gb|AAK41395.1| ABC transporter, ATP binding protein [Sulfolobus ... 139 3e-32
dbj|BAB09013.1| (AB012239) contains similarity to ABC transporte... 139 3e-32
dbj|BAB04009.1| (AP001508) ABC transporter (ATP-binding protein)... 139 3e-32
gb|AAK41557.1| Antibiotic ABC transporter, ATP binding protein [... 139 4e-32
pir||S60124 transport protein homolog C48B4.4 - Caenorhabditis e... 139 4e-32
pir||T42749 ATP-binding cassette transport protein homolog - Cae... 139 4e-32
sp|P34358|YLH4_CAEEL PUTATIVE ABC TRANSPORTER C48B4.4 IN CHROMOS... 139 4e-32
emb|CAA82383.2| (Z29117) contains similarity to Pfam domain: PF0... 139 4e-32
emb|CAA82384.2| (Z29117) contains similarity to Pfam domain: PF0... 139 4e-32
gb|AAK42130.1| Antibiotic ABC transporter ATP binding protein [S... 138 9e-32
dbj|BAB04167.1| (AP001508) ABC transporter (ATP-binding protein)... 138 1e-31
pir||S71363 probable ATP-binding cassette transporter ABC-3 - hu... 137 2e-31
gi|4501849 ATP-binding cassette, sub-family A member 3; ATP-bind... 137 2e-31
pir||T07714 probable ABC-type transport protein T23J7.80 - Arabi... 137 2e-31
gi|11431125 ATP-binding cassette, sub-family A member 3 [Homo sa... 137 2e-31
gb|AAG21390.1|AF302051_4 (AF302051) ABC transporter ATP binding ... 136 3e-31
sp|P44785|ABC_HAEIN ATP-BINDING PROTEIN ABC >gi|1073885|pir||C64... 135 6e-31
dbj|BAB16596.1| (AB037937) ABC2 [Rattus norvegicus] 135 6e-31
pir||A59189 ATP-binding cassette transporter - human (fragment) ... 134 1e-30
gb|AAG09372.1|AF178941_1 (AF178941) ATP-binding cassette sub-fam... 134 1e-30
gb|AAC36155.1| (AF003632) PilH [Myxococcus xanthus] 134 2e-30
pir||A75083 ATP-binding transport protein PAB1668 - Pyrococcus a... 133 2e-30
dbj|BAB08166.1| (AB030831) SrtF [Streptococcus pyogenes] 133 3e-30
pir||D70020 ABC transporter (ATP-binding protein) homolog yusC -... 131 1e-29
pir||T36523 probable ABC-type transport system ATP-binding prote... 131 1e-29
pir||T07712 probable ABC-type transport protein T23J7.60 - Arabi... 131 1e-29
pir||T07716 probable ABC-type transport protein T23J7.100 - Arab... 130 2e-29
gb|AAC62423.1| (AF084104) NatA [Bacillus firmus] 130 3e-29
pir||H64716 ABC transporter, ATP-binding protein - Helicobacter ... 129 3e-29
gb|AAF23811.1|AF213822_26 (AF213822) ABC binding protein [Zymomo... 129 3e-29
pir||T35090 probable ABC transport ATP-binding subunit - Strepto... 129 4e-29
pir||F71800 ABC transporter, ATP-binding protein - Helicobacter ... 128 8e-29
gi|7304849 ATP-binding cassette 1, sub-family A, member 1 [Mus m... 128 1e-28
gb|AAC45666.1| (AF010307) AbcC [Helicobacter pylori] 128 1e-28
emb|CAB75312.1| (AL139164) putative ABC transporter ATP-binding ... 127 1e-28
pir||A70039 ABC transporter (ATP-binding protein) homolog yvfR -... 127 2e-28
gb|AAB91597.1| (U09819) SpaF [Bacillus subtilis] 127 2e-28
gi|5915658 ATP-binding cassette, sub-family A member 1; ATP-bind... 127 2e-28
gb|AAF86276.1|AF275948_1 (AF275948) ABCA1 [Homo sapiens] 127 2e-28
gb|AAF98175.1|AF285167_1 (AF285167) ATP-binding cassette transpo... 127 2e-28
gi|11429275 ATP-binding cassette, sub-family A member 1 [Homo sa... 127 2e-28
emb|CAC11214.1| (AL445063) gliding motility protein (gldA) relat... 127 2e-28
gb|AAG35594.1|AF200948_1 (AF200948) ABC1 transporter [Leishmania... 126 3e-28
gb|AAC44025.1| (U47133) NosF protein [Sinorhizobium meliloti] >g... 126 4e-28
pir||T15200 hypothetical protein F12B6.1 - Caenorhabditis elegan... 126 4e-28
pir||T33783 hypothetical protein Y39D8C.1 - Caenorhabditis elega... 124 1e-27
emb|CAB99138.1| (AL390188) putative ABC transport system ATP-bin... 122 4e-27
sp|P19844|NOSF_PSEST COPPER TRANSPORT ATP-BINDING PROTEIN NOSF >... 122 6e-27
pir||T45265 cobalt transport ATP-binding protein O homolog [impo... 122 6e-27
pir||D75447 ABC transporter, ATP-binding protein - Deinococcus r... 121 1e-26
emb|CAB94566.1| (AL359152) putative ABC transporter ATP-binding ... 120 2e-26
gb|AAK41416.1| Sugar ABC transporter [Sulfolobus solfataricus] 120 2e-26
pir||T36764 probable ABC-type transport system ATP-binding prote... 120 2e-26
pir||E81337 ABC-transporter ATP-binding protein Cj0669 [imported... 120 3e-26
pir||H69746 ABC transporter (binding protein) homolog ybdA - Bac... 119 4e-26
pir||D71179 probable sugar ABC transporter - Pyrococcus horikosh... 119 4e-26
pir||E72378 sugar ABC transporter, ATP-binding protein - Thermot... 119 4e-26
pir||E72636 probable nodulation ATP-binding protein I APE1548 - ... 119 4e-26
sp|P26946|YATR_BACFI HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 118 1e-25
sp|Q45460|OPBA_BACSU CHOLINE TRANSPORT ATP-BINDING PROTEIN OPUBA... 118 1e-25
pir||C69819 ABC transporter (ATP-binding protein) homolog yhaQ -... 117 1e-25
pir||T14167 ABC transport protein - Mycobacterium smegmatis >gi|... 117 1e-25
pir||H72356 amino acid ABC transporter, ATP-binding protein - Th... 116 3e-25
pir||G81344 ABC transport system ATP-binding protein Cj0732 [imp... 116 3e-25
pir||D82147 amino acid ABC transporter, ATP-binding protein VC18... 116 4e-25
dbj|BAB07632.1| (AP001520) ABC transporter (ATP-binding protein)... 116 4e-25
gb|AAK43169.1| Arabinose ABC transporter, ATP-binding protein [S... 115 6e-25
pir||D72415 zinc ABC transporter, ATP-binding protein - Thermoto... 115 6e-25
dbj|BAB04885.1| (AP001511) ABC transporter (ATP-binding protein)... 115 6e-25
sp|O52618|NODI_RHIME NODULATION ATP-BINDING PROTEIN I >gi|280954... 115 1e-24
gi|10954682 probable mikimopine transporter gene~similar to potA... 115 1e-24
gb|AAA23639.1| (M32101) cysA [Escherichia coli] 114 1e-24
pir||G69043 cobalt transport ATP-binding protein O - Methanobact... 114 1e-24
pir||H75161 ribose abc transporter, ATP-binding protein (rbsa) P... 114 1e-24
sp|P16676|CYSA_ECOLI SULFATE TRANSPORT ATP-BINDING PROTEIN CYSA ... 114 2e-24
pir||C72336 ABC transporter, ATP-binding protein - Thermotoga ma... 112 5e-24
sp|P37774|YECC_ECOLI HYPOTHETICAL AMINO-ACID ABC TRANSPORTER ATP... 111 8e-24
gb|AAK42960.1| ABC transporter, ATP binding protein (glucose) [S... 111 1e-23
pir||H72272 sugar ABC transporter, ATP-binding protein - Thermot... 111 1e-23
dbj|BAB04005.1| (AP001508) ABC transporter (ATP-binding protein)... 110 2e-23
pir||H72342 ABC transporter, ATP-binding protein - Thermotoga ma... 109 3e-23
pir||H72301 ABC transporter, ATP-binding protein - Thermotoga ma... 109 5e-23
gb|AAF56807.1| (AE003766) CG9990 gene product [Drosophila melano... 109 5e-23
pir||S34187 probable ABC-type transport protein TnrB2 - Streptom... 108 7e-23
pir||G71271 probable ABC transporter natA - syphilis spirochete ... 108 7e-23
pir||F71654 ABC transporter ATP-binding protein (abcT2) RP508 - ... 108 7e-23
gi|11499064 ABC transporter, ATP-binding protein [Archaeoglobus ... 108 9e-23
gb|AAD09159.1| (AF047429) putative ATP/GTP binding protein NosF ... 108 9e-23
pir||B72300 oligopeptide ABC transporter, ATP-binding protein - ... 108 1e-22
pir||E72428 oligopeptide ABC transporter, ATP-binding protein - ... 107 2e-22
sp|P55604|Y4OS_RHISN PROBABLE ABC TRANSPORTER ATP-BINDING PROTEI... 106 3e-22
pir||C72615 probable transport ATP-binding protein APE1380 - Aer... 106 4e-22
pir||H82727 sugar ABC transporter ATP-binding protein XF1067 [im... 106 4e-22
gi|11498623 ABC transporter, ATP-binding protein [Archaeoglobus ... 106 5e-22
pir||A70001 ABC transporter (ATP-binding protein) homolog ytsC -... 105 6e-22
pir||A70482 ABC transporter - Aquifex aeolicus >gi|2984331|gb|AA... 105 6e-22
pir||B72424 oligopeptide ABC transporter, ATP-binding protein - ... 105 6e-22
pir||C72421 oligopeptide ABC transporter, ATP-binding protein - ... 105 6e-22
pir||C72289 oligopeptide ABC transporter, ATP-binding protein - ... 105 8e-22
pir||A83621 probable ATP-binding component of ABC transporter PA... 104 1e-21
gb|AAK41340.1| ABC transporter, ATP binding subunit [Sulfolobus ... 104 1e-21
pir||G69192 ABC transporter (glutamine transport ATP-binding pro... 104 1e-21
gb|AAF81232.1| (AF263012) ABC transporter ATP binding protein [S... 104 1e-21
pir||H82355 peptide ABC transporter, ATP-binding protein VC0170 ... 104 2e-21
dbj|BAA75354.1| (AB011838) similar to B.subtilis ytsC gene(80%-i... 103 2e-21
emb|CAB60755.1| (Y18641) ATP-binding protein [Staphylococcus aur... 103 2e-21
pir||E71067 probable ferrichrome transport ATP-binding protein -... 102 4e-21
gb|AAG22038.1|AF305387_5 (AF305387) OppF [Bacillus thuringiensis] 102 5e-21
sp|P45073|YHBG_HAEIN PROBABLE ABC TRANSPORTER ATP-BINDING PROTEI... 102 7e-21
gb|AAD43475.1|AF125260_3 (AF125260) NosF [Rhodobacter sphaeroide... 101 9e-21
pir||C65111 probable ABC transporter (ntrA/rpoN 5'region) - Esch... 101 1e-20
pir||F70032 ABC transporter (ATP-binding protein) homolog yvcR -... 101 1e-20
sp|P31220|YHBG_ECOLI PROBABLE ABC TRANSPORTER ATP-BINDING PROTEI... 101 2e-20
dbj|BAA95937.1| (AB035092) Orf5 [Clostridium perfringens] 101 2e-20
dbj|BAB04859.1| (AP001511) sugar ABC transportor (ATP-binding pr... 100 4e-20
pir||F82386 amino acid ABC transporter, ATP-binding protein VCA1... 99 5e-20
gi|10956099 ABC transporter subunit PenJ [Pediococcus pentosaceu... 99 8e-20
pir||B72417 sugar ABC transporter, ATP-binding protein - Thermot... 98 2e-19
gb|AAC04471.1| (AF007800) MtlK [Pseudomonas fluorescens] 97 2e-19
pir||C75077 iron (iii) abc transporter, ATP-binding protein (hem... 97 2e-19
pir||C83009 probable ATP-binding component of ABC transporter PA... 97 3e-19
pir||C69992 ABC transporter (ATP-binding protein) homolog ytgB -... 96 4e-19
dbj|BAB04795.1| (AP001510) sugar ABC transporter (ATP-binding pr... 96 5e-19
pir||S74749 ABC-type transport protein slr0982 - Synechocystis s... 96 5e-19
gb|AAC62409.1| (AF084104) maltose transportor ATP-binding protei... 96 5e-19
sp|O30506|AOTP_PSEAE ARGININE/ORNITHINE TRANSPORT ATP-BINDING PR... 96 7e-19
gb|AAB17558.1| (U72493) ATP binding protein [Chlamydia trachomatis] 95 9e-19
pir||A70338 ABC transporter - Aquifex aeolicus >gi|2983088|gb|AA... 95 9e-19
pir||G71486 probable ABC transporter ATPase - Chlamydia trachoma... 95 9e-19
gb|AAF73520.1| (AE002271) ABC transporter, ATP-binding protein [... 95 9e-19
sp|P94360|MSMX_BACSU PROBABLE MULTIPLE SUGAR-BINDING TRANSPORT A... 95 1e-18
pir||E82065 ABC transporter, ATP-binding protein VC2528 [importe... 95 1e-18
pir||H72215 oligopeptide ABC transporter, ATP-binding protein - ... 95 1e-18
pir||H81391 amino-acid ABC transporter ATP-binding protein Cj046... 94 2e-18
sp|P43245|MDR1_RAT MULTIDRUG RESISTANCE PROTEIN 1 (P-GLYCOPROTEI... 94 2e-18
pir||C72044 ABC transporter ATPase - Chlamydophila pneumoniae (s... 94 2e-18
pir||D72289 oligopeptide ABC transporter, ATP-binding protein - ... 94 2e-18
sp|P21449|MDR2_CRIGR MULTIDRUG RESISTANCE PROTEIN 2 (P-GLYCOPROT... 94 3e-18
sp|P73450|NRTC_SYNY3 NITRATE TRANSPORT ATP-BINDING PROTEIN NRTC ... 93 4e-18
gb|AAG32539.1| (AY005472) SalX [Streptococcus salivarius] 92 8e-18
dbj|BAB07358.1| (AP001519) oligopeptide ABC transporter (ATP-bin... 92 1e-17
pir||D64507 methyl coenzyme M reductase system, component A2 hom... 91 2e-17
gb|AAB99680.1| (U67606) methyl coenzyme M reductase system, comp... 91 2e-17
pir||E83248 probable ATP-binding component of ABC transporter PA... 90 2e-17
pir||E70952 probable sugC protein - Mycobacterium tuberculosis (... 90 3e-17
pir||C70355 ABC transporter - Aquifex aeolicus >gi|2983231|gb|AA... 90 3e-17
sp|P77481|YCJV_ECOLI HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 90 4e-17
dbj|BAB04930.1| (AP001511) ABC transporter (ATP-binding protein)... 90 4e-17
gi|6755046 ATP-binding cassette, sub-family B, member 1; P glyco... 89 5e-17
dbj|BAB04758.1| (AP001510) iron (III) dicitrate transport system... 89 7e-17
gb|AAG20232.1| (AE005098) phosphonates transport ATP-binding; Ph... 89 7e-17
sp|P75059|POTA_MYCPN SPERMIDINE/PUTRESCINE TRANSPORT ATP-BINDING... 78 1e-13
emb|CAC11237.1| (AL445063) gliding motility protein related [The... 71 1e-11
>pir||H75157 daunorubicin resistance ATP-binding protein (drra-2) PAB2068 -
Pyrococcus abyssi (strain Orsay)
>gi|5457853|emb|CAB49343.1| (AJ248284) daunorubicin
resistance ATP-binding protein (drrA-2) [Pyrococcus
abyssi]
Length = 318
Score = 632 bits (1612), Expect = e-180
Identities = 318/318 (100%), Positives = 318/318 (100%)
Query: 1 MKAIEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKIL 60
MKAIEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKIL
Sbjct: 1 MKAIEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKIL 60
Query: 61 TTLLEPTSGEARVLGFDIVKEAREIRKRINLVAEGERTLYWRLTAYENLRYFASIYYVPK 120
TTLLEPTSGEARVLGFDIVKEAREIRKRINLVAEGERTLYWRLTAYENLRYFASIYYVPK
Sbjct: 61 TTLLEPTSGEARVLGFDIVKEAREIRKRINLVAEGERTLYWRLTAYENLRYFASIYYVPK 120
Query: 121 KVAEERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQ 180
KVAEERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQ
Sbjct: 121 KVAEERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQ 180
Query: 181 SAIFVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRIIALDTPEGLKKLVRK 240
SAIFVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRIIALDTPEGLKKLVRK
Sbjct: 181 SAIFVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRIIALDTPEGLKKLVRK 240
Query: 241 DTIVEVRVKNYNGENPFGLAKIKEEGEKVVLRGPLDEEDIPKLVEFLVKNNAKVLSVEVK 300
DTIVEVRVKNYNGENPFGLAKIKEEGEKVVLRGPLDEEDIPKLVEFLVKNNAKVLSVEVK
Sbjct: 241 DTIVEVRVKNYNGENPFGLAKIKEEGEKVVLRGPLDEEDIPKLVEFLVKNNAKVLSVEVK 300
Query: 301 EPTLEDVFIKLTGRGLRD 318
EPTLEDVFIKLTGRGLRD
Sbjct: 301 EPTLEDVFIKLTGRGLRD 318
>pir||C71197 probable ATP-binding transport protein - Pyrococcus horikoshii
>gi|3258287|dbj|BAA30970.1| (AP000007) 318aa long
hypothetical ATP-binding transport protein [Pyrococcus
horikoshii]
Length = 318
Score = 553 bits (1409), Expect = e-156
Identities = 270/318 (84%), Positives = 299/318 (93%)
Query: 1 MKAIEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKIL 60
M IEV+NLRKLYPKKIPLPFRK+EWFEALKGITF VKKGELFGLLGPNGAGKTTTIKIL
Sbjct: 1 MNVIEVRNLRKLYPKKIPLPFRKVEWFEALKGITFRVKKGELFGLLGPNGAGKTTTIKIL 60
Query: 61 TTLLEPTSGEARVLGFDIVKEAREIRKRINLVAEGERTLYWRLTAYENLRYFASIYYVPK 120
TTLLEP+SGEA+VLG D+VK+AREIRKRINLVAEGERTLYWRLTAYENLRYFASIYY+P+
Sbjct: 61 TTLLEPSSGEAKVLGLDVVKDAREIRKRINLVAEGERTLYWRLTAYENLRYFASIYYIPR 120
Query: 121 KVAEERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQ 180
+ AE+RI LL MVGLWDR++DLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQ
Sbjct: 121 REAEKRIEELLKMVGLWDRRNDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQ 180
Query: 181 SAIFVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRIIALDTPEGLKKLVRK 240
SA+FVREL+++LV+EE KTVLLTTHYM+EAEELCDRIAIIDHG+IIAL+TPEGLK++VR
Sbjct: 181 SAVFVRELVRRLVDEEGKTVLLTTHYMNEAEELCDRIAIIDHGKIIALNTPEGLKRMVRN 240
Query: 241 DTIVEVRVKNYNGENPFGLAKIKEEGEKVVLRGPLDEEDIPKLVEFLVKNNAKVLSVEVK 300
DTIVEVRV+NY G NPFGL K+ + V+LRG L+EE+IPKLVEFLVK+NAKVLSVEVK
Sbjct: 241 DTIVEVRVRNYPGVNPFGLVKVDDRNGVVILRGSLEEEEIPKLVEFLVKSNAKVLSVEVK 300
Query: 301 EPTLEDVFIKLTGRGLRD 318
EPTLEDVFIKLTGRGLRD
Sbjct: 301 EPTLEDVFIKLTGRGLRD 318
>pir||E75108 daunorubicin resistance ATP-binding protein (drra-1) PAB1923 -
Pyrococcus abyssi (strain Orsay)
>gi|5458093|emb|CAB49582.1| (AJ248285) daunorubicin
resistance ATP-binding protein (drrA-1) [Pyrococcus
abyssi]
Length = 328
Score = 270 bits (683), Expect = 2e-71
Identities = 159/324 (49%), Positives = 210/324 (64%), Gaps = 20/324 (6%)
Query: 1 MKAIEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKIL 60
M AIEV+NL K Y F A+KGI+F VKKGE+F LGPNGAGKTTT+ +L
Sbjct: 1 MYAIEVENLVKKYGD-----------FTAVKGISFKVKKGEIFAFLGPNGAGKTTTVHVL 49
Query: 61 TTLLEPTSGEARVLGFDIVKEAREIRKRINLVAEGERTLYWRLTAYENLRYFASIYYVPK 120
TTLL+PTSG+A V G D+VKE +E+RK+I +V + + +L LTAYEN+ IY +
Sbjct: 50 TTLLKPTSGKAIVAGHDVVKEPQEVRKKIGIVFQ-DPSLDRELTAYENMYIHGMIYGLKG 108
Query: 121 KVAEERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQ 180
+ +E+I LL V LW KD V +S GM++RL IA+ALI++PE+LFLDEPT+GLD Q
Sbjct: 109 RELKEKIEELLKFVELWRFKDRPVKYFSGGMQRRLEIARALIHEPEILFLDEPTIGLDPQ 168
Query: 181 SAIFVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRIIALDTPEGLKKLVRK 240
+ + E I+ + EE + T+ LTTHYM EAE+L DRIAIIDHG+IIA T E LKKLV
Sbjct: 169 TRAHIWEYIRTMKEEHEMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTSEELKKLVGN 228
Query: 241 DTIVEVRVKNYNGENPFGLA------KIKEEGEKVVLRGPLDEEDIPKLVEFLVKNNAKV 294
D I+ +++++ E A K+ +G +V + E +PKL E KNN K+
Sbjct: 229 D-IIYLKLESPKEELKCLKADFIRGCKLLPDG-RVRIDVENATEALPKLFELAQKNNVKI 286
Query: 295 LSVEVKEPTLEDVFIKLTGRGLRD 318
L V PTL DVF+ LTGR +RD
Sbjct: 287 LEVTYHRPTLNDVFLHLTGREIRD 310
>pir||D72484 probable ATP-binding protein APE2516 - Aeropyrum pernix (strain
K1) >gi|5106221|dbj|BAA81532.1| (AP000064) 323aa long
hypothetical ATP-binding protein [Aeropyrum pernix]
Length = 323
Score = 270 bits (682), Expect = 2e-71
Identities = 154/320 (48%), Positives = 213/320 (66%), Gaps = 13/320 (4%)
Query: 3 AIEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKILTT 62
A+E + L K Y + LP+R AL G+ V +G LF LLGPNGAGKTT +KIL+T
Sbjct: 4 AVEAEALVKEYRMGL-LPWRA-RTIRALDGVDLKVGRGTLFSLLGPNGAGKTTLVKILST 61
Query: 63 LLEPTSGEARVLGFDIVKEAREIRKRINLVAEGERTLYWRLTAYENLRYFASIYYVPKKV 122
LL P SG ARV GFD+V+EA +R RI +V GER LYWRL+ ++NL +F+ +Y +P +
Sbjct: 62 LLLPDSGWARVAGFDVVREANNVRSRIGVVLGGERALYWRLSGWDNLWFFSQLYGIPPRE 121
Query: 123 AEERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQSA 182
A+ R++ LL +VGL + V NYS+GMKQRL IA+ LINDPEVL LDEPT+GLD ++A
Sbjct: 122 AKRRVKELLEIVGLEEWAHVRVENYSKGMKQRLHIARGLINDPEVLLLDEPTIGLDPKAA 181
Query: 183 IFVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRIIALDTPEGLKKLVRKDT 242
VR +I+++V E +TVLLTTHYM EAEEL DR+AII GRI+A PE LK LV ++
Sbjct: 182 REVRSIIRRIV-REGRTVLLTTHYMVEAEELSDRVAIISKGRIVAEGPPEDLKSLVGGES 240
Query: 243 IVEVRVKNYNGENPF-------GLAKIKEEGEKVVLRGPLDEED--IPKLVEFLVKNNAK 293
++E++V + + ++ ++ +G + V R + E D I L+ L + NA
Sbjct: 241 VIELKVMGGDRVSMLLERLGGRVISVVERDGAR-VFRVLVSEPDSFIEALLAELTRINAS 299
Query: 294 VLSVEVKEPTLEDVFIKLTG 313
+ ++V+ P+LEDVFIKL G
Sbjct: 300 IRGLDVRSPSLEDVFIKLAG 319
>gi|11499468 daunorubicin resistance ATP-binding protein (drrA) [Archaeoglobus
fulgidus] >gi|7445660|pir||C69485 daunorubicin
resistance ATP-binding protein (drrA) homolog -
Archaeoglobus fulgidus >gi|2648659|gb|AAB89368.1|
(AE000972) daunorubicin resistance ATP-binding protein
(drrA) [Archaeoglobus fulgidus]
Length = 398
Score = 265 bits (669), Expect = 7e-70
Identities = 151/320 (47%), Positives = 209/320 (65%), Gaps = 16/320 (5%)
Query: 1 MKAIEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKIL 60
M AIEV+NL K K FEA++G++F VK+GE+F LGPNGAGKTTT+ IL
Sbjct: 77 MYAIEVENLVK-----------KFGDFEAVRGVSFKVKRGEIFAFLGPNGAGKTTTVHIL 125
Query: 61 TTLLEPTSGEARVLGFDIVKEAREIRKRINLVAEGERTLYWRLTAYENLRYFASIYYVPK 120
TTLL+PTSG+A V G D+V+EARE+R+RI +V + + ++ LTAYEN+ +Y +
Sbjct: 126 TTLLKPTSGKAFVAGLDVVREAREVRRRIGIVFQ-DPSVDRDLTAYENMLVHGGVYGLKG 184
Query: 121 KVAEERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQ 180
K +E+I LL V LW+ +D LV +S GM++RL IA++L++ PEVLFLDEPT+GLD Q
Sbjct: 185 KELKEKIERLLKFVELWEFRDKLVKYFSGGMQRRLEIARSLLHHPEVLFLDEPTIGLDPQ 244
Query: 181 SAIFVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRIIALDTPEGLKKLVRK 240
+ V I+ + EE+ T+ LTTHYM EAE+L DR+AIIDHGRIIA + E LK+LV
Sbjct: 245 TRAHVWSYIEAMKEEQDMTIFLTTHYMEEAEKLADRVAIIDHGRIIAEGSVEELKRLVGS 304
Query: 241 DTIVEVRVKNYNG--ENPFGLAKIKEEGEKVVLRGPLDEEDIPKLVEFLVKNNAKVLSVE 298
D +V ++V+N E G + +G ++ + E IPK+ E + ++L V
Sbjct: 305 D-VVYLKVENGAECFETGLGNCVVLPDG-RIRIDVSNASEAIPKIFEIAREKGVRILEVT 362
Query: 299 VKEPTLEDVFIKLTGRGLRD 318
PTL DVF+ LTGR +RD
Sbjct: 363 YHRPTLNDVFLHLTGREIRD 382
>pir||C71081 probable resistance ATP-binding protein - Pyrococcus horikoshii
>gi|3257326|dbj|BAA30009.1| (AP000004) 324aa long
hypothetical resistance ATP-binding protein [Pyrococcus
horikoshii]
Length = 324
Score = 254 bits (641), Expect = 1e-66
Identities = 150/319 (47%), Positives = 201/319 (62%), Gaps = 14/319 (4%)
Query: 1 MKAIEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKIL 60
++AI V+NL K Y FEA++GI+F V++GE+F LGPNGAGKTTT+ +L
Sbjct: 4 VEAIIVENLVKKYGD-----------FEAVRGISFKVRRGEIFAFLGPNGAGKTTTVHML 52
Query: 61 TTLLEPTSGEARVLGFDIVKEAREIRKRINLVAEGERTLYWRLTAYENLRYFASIYYVPK 120
TTLL+PTSG A V G D+VKE+RE+RK+I +V + + ++ LTA+EN+ IY +
Sbjct: 53 TTLLKPTSGRAIVAGHDVVKESREVRKKIGVVFQ-DPSVDRELTAWENMYIHGRIYGLKG 111
Query: 121 KVAEERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQ 180
+ +++I LL V LW+ KD V +S GM++RL IA+ALI++PEVLFLDEPT+GLD Q
Sbjct: 112 QELKKKIEELLKFVELWEFKDRQVKYFSGGMQRRLEIARALIHEPEVLFLDEPTIGLDPQ 171
Query: 181 SAIFVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRIIALDTPEGLKKLVRK 240
+ + E IK + EE T+ LTTHYM EAE+L DRIAIIDHG+IIA T E LKKLV
Sbjct: 172 TRAHIWEYIKTMKEEHDMTIFLTTHYMDEAEQLADRIAIIDHGKIIAEGTAEELKKLVGN 231
Query: 241 DTI-VEVRVKNYNGENPFGLAKIKEEGEKVVLRGPLDEEDIPKLVEFLVKNNAKVLSVEV 299
D I V+ K+ G +V L E +P + E + K+L V
Sbjct: 232 DIIYVKFEKPTCIQAEFIRGCKVLNNG-RVALEVKNAAEALPLVFEKAREMELKILEVTY 290
Query: 300 KEPTLEDVFIKLTGRGLRD 318
PTL DVF+ LTGR +RD
Sbjct: 291 HRPTLNDVFLHLTGREIRD 309
>pir||D72257 hypothetical protein TM1403 - Thermotoga maritima (strain MSB8)
>gi|4981967|gb|AAD36474.1|AE001793_4 (AE001793)
antibiotic ABC transporter, ATP-binding protein,
putative [Thermotoga maritima]
Length = 327
Score = 251 bits (635), Expect = 7e-66
Identities = 145/305 (47%), Positives = 200/305 (65%), Gaps = 16/305 (5%)
Query: 22 RKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKILTTLLEPTSGEARVLGFDIVKE 81
+K FEA+KG++F+VKKGE+F LGPNGAGKTTTI +LTTLL+PTSG+A V G D++KE
Sbjct: 12 KKFGDFEAVKGVSFSVKKGEIFAFLGPNGAGKTTTIHMLTTLLKPTSGKAWVAGHDVLKE 71
Query: 82 AREIRKRINLVAEGERTLYWRLTAYENLRYFASIYYVPKKVAEERIRNLLHMVGLWDRKD 141
RE+R++I +V + +++L LTAYEN+ IY + ++RI LL V L + KD
Sbjct: 72 PREVRRKIGIVFQ-DQSLDRELTAYENMYIHGKIYGYGGEKLKKRILELLEFVELLEFKD 130
Query: 142 DLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQSAIFVRELIKKLVEEEKKTVL 201
V +S GM +RL IA++LI++PEVLFLDEPT+GLD + + E I K+ +E T+
Sbjct: 131 KPVKTFSGGMARRLEIARSLIHEPEVLFLDEPTIGLDPHTRAHMWEYISKMKKEHNMTIF 190
Query: 202 LTTHYMHEAEELCDRIAIIDHGRIIALDTPEGLKKLVRKDTIVEVR----VKNYNGENPF 257
LTTHYM EAE+L DR+AIIDHG+IIAL TP LK++V K+ I+ VR V+ G+
Sbjct: 191 LTTHYMDEAEQLADRVAIIDHGKIIALGTPTELKRMVGKE-IIYVRFSEAVECLEGDFIE 249
Query: 258 GLAKIKEEGEKVVLRGPLDEED----IPKLVEFLVKNNAKVLSVEVKEPTLEDVFIKLTG 313
K+ + R L+ ED IPK+ E + K+ + +PTL DVF+ LTG
Sbjct: 250 SCRKLPDG------RLELNVEDSGRAIPKIFELAQQKGLKIEEITYHKPTLNDVFLHLTG 303
Query: 314 RGLRD 318
R LR+
Sbjct: 304 RELRE 308
>pir||C69012 ABC transporter (ATP-binding, daunorubicin resistance) -
Methanobacterium thermoautotrophicum (strain Delta H)
>gi|2622194|gb|AAB85582.1| (AE000880) ABC transporter
(ATP-binding [Methanobacterium thermoautotrophicum]
Length = 312
Score = 248 bits (626), Expect = 8e-65
Identities = 140/306 (45%), Positives = 195/306 (62%), Gaps = 15/306 (4%)
Query: 22 RKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKILTTLLEPTSGEARVLGFDIVKE 81
+K + F A+KG+ V +G ++G+LGPNGAGKTT I +L T+L PT G V G+DIV++
Sbjct: 12 KKYDEFLAVKGVNLRVPEGSIYGVLGPNGAGKTTLISMLCTILRPTGGRGTVNGYDIVRD 71
Query: 82 AREIRKRINLVAEGERTLYWRLTAYENLRYFASIYYVPKKVAEERIRNLLHMVGLWDRKD 141
AR++R+ I +V + R L LT E+L A++Y VP+ V + RI +L ++ L D+ D
Sbjct: 72 ARKVRESIGIVFQS-RALDDILTGREHLEMHAALYGVPRDVRDRRIEEVLELIALGDKAD 130
Query: 142 DLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQSAIFVRELIKKLVEEEKKTVL 201
+ V YS GMK+RL I + LI+ P VLFLDEPTLGLD Q+ + I+KL EE TVL
Sbjct: 131 EYVKTYSGGMKRRLEIGRGLIHHPRVLFLDEPTLGLDPQTRESIWRYIEKLNREEDVTVL 190
Query: 202 LTTHYMHEAEELCDRIAIIDHGRIIALDTPEGLKKLVRKDTIVEVRVKNYNGENPFGLAK 261
LTTHYM EA++LCD +AI+ HG II D+P LK+ + DTI VRV G + L K
Sbjct: 191 LTTHYMEEADKLCDEVAIMSHGEIIKADSPGNLKRELGADTIT-VRVDRARGFHEI-LEK 248
Query: 262 ---------IKEEGEKVVLRGPLDEEDIPKLVEFLVKNNAKVLSVEVKEPTLEDVFIKLT 312
+ +E + +V RG E +P++V +NN V +VE++ PTLEDVFIK T
Sbjct: 249 QDYVKEAYLMDDEVKVLVERG---ENLVPEIVNLAARNNYYVRAVELEHPTLEDVFIKYT 305
Query: 313 GRGLRD 318
GRG+ +
Sbjct: 306 GRGISE 311
>pir||S74048 probable daunorubicin resistance protein - Sulfolobus solfataricus
>gi|1707742|emb|CAA69462.1| (Y08256) daunorubicin
resistance ATP-binding protein DrrA [Sulfolobus
solfataricus]
Length = 339
Score = 240 bits (605), Expect = 2e-62
Identities = 134/322 (41%), Positives = 201/322 (61%), Gaps = 19/322 (5%)
Query: 3 AIEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKILTT 62
AI+ NL K + K F A+ I F V +GE+FG LGPNGAGK+TTIK+LTT
Sbjct: 11 AIKAINLTKRFGK-----------FVAVDHINFEVYEGEIFGFLGPNGAGKSTTIKMLTT 59
Query: 63 LLEPTSGEARVLGFDIVKEAREIRKRINLVAEGERTLYWRLTAYENLRYFASIYYVPKKV 122
+L+P+ G A V G+D++K+ +R+ I +V + E T LT +EN+ A +Y +PK++
Sbjct: 60 VLKPSEGTATVSGYDVIKQPALVRQSIGVVPQ-EYTADEDLTGWENMMMMAGLYGIPKRI 118
Query: 123 AEERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQSA 182
AEER + LL MV L V YS GM++RL IA +LI+ P +LFLDEPTLGLD Q+
Sbjct: 119 AEERAKELLEMVELTYAAKRKVETYSGGMRRRLEIAMSLISRPRILFLDEPTLGLDAQTR 178
Query: 183 IFVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRIIALDTPEGLKKLVRKDT 242
+ + I KL EE K T+ +TTHY+ EA+ DRIAIID G+I+A+ +P+ LK+ V D
Sbjct: 179 AAIWQYIMKLKEEYKMTIFVTTHYLEEADMYGDRIAIIDKGKILAIGSPKELKEKVGGDV 238
Query: 243 IV------EVRVKNYNGENPFGLAKIKEEGEKVVLRGPLDEEDIPKLVEFLVKNNAKVLS 296
+ E+ +K + G+ +++ + + ++ EE P+++E LVKN KV
Sbjct: 239 VSLQTSNDELAIKIISSSKD-GILDVRKASDGIRIKVRNGEEKAPEILESLVKNGIKVSR 297
Query: 297 VEVKEPTLEDVFIKLTGRGLRD 318
+ + EPT+++V+++ TG+ LRD
Sbjct: 298 MSITEPTMDEVYMEFTGKSLRD 319
>gb|AAK42315.1| ABC transporter, ATP binding protein. [Sulfolobus solfataricus]
Length = 339
Score = 240 bits (605), Expect = 2e-62
Identities = 134/322 (41%), Positives = 201/322 (61%), Gaps = 19/322 (5%)
Query: 3 AIEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKILTT 62
AI+ NL K + K F A+ I F V +GE+FG LGPNGAGK+TTIK+LTT
Sbjct: 11 AIKAINLTKRFGK-----------FVAVDHINFEVYEGEIFGFLGPNGAGKSTTIKMLTT 59
Query: 63 LLEPTSGEARVLGFDIVKEAREIRKRINLVAEGERTLYWRLTAYENLRYFASIYYVPKKV 122
+L+P+ G A V G+D++K+ +R+ I +V + E T LT +EN+ A +Y +PK++
Sbjct: 60 VLKPSEGTATVSGYDVIKQPALVRQSIGVVPQ-EYTADEDLTGWENMMMMAGLYGIPKRI 118
Query: 123 AEERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQSA 182
AEER + LL MV L V YS GM++RL IA +LI+ P +LFLDEPTLGLD Q+
Sbjct: 119 AEERAKELLEMVELTYAAKRKVETYSGGMRRRLEIAMSLISRPRILFLDEPTLGLDAQTR 178
Query: 183 IFVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRIIALDTPEGLKKLVRKDT 242
+ + I KL EE K T+ +TTHY+ EA+ DRIAIID G+I+A+ +P+ LK+ V D
Sbjct: 179 AAIWQYIMKLKEEYKMTIFVTTHYLEEADMYGDRIAIIDKGKILAIGSPKELKEKVGGDV 238
Query: 243 IV------EVRVKNYNGENPFGLAKIKEEGEKVVLRGPLDEEDIPKLVEFLVKNNAKVLS 296
+ E+ +K + G+ +++ + + ++ EE P+++E LVKN KV
Sbjct: 239 VSLQTSNDELAIKIISSSKD-GILDVRKASDGIRIKVRNGEEKAPEILESLVKNGIKVSR 297
Query: 297 VEVKEPTLEDVFIKLTGRGLRD 318
+ + EPT+++V+++ TG+ LRD
Sbjct: 298 MSITEPTMDEVYMEFTGKSLRD 319
>pir||G71131 probable ATP-binding protein - Pyrococcus horikoshii
>gi|3257230|dbj|BAA29913.1| (AP000003) 312aa long
hypothetical ATP-binding protein [Pyrococcus horikoshii]
Length = 312
Score = 238 bits (600), Expect = 8e-62
Identities = 131/317 (41%), Positives = 204/317 (64%), Gaps = 23/317 (7%)
Query: 4 IEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKILTTL 63
IE NL K Y F A++G+TF+V +GE+FG LGPNGAGKTTTI++LT +
Sbjct: 8 IEAINLTKYYGN-----------FPAVRGVTFSVNEGEVFGFLGPNGAGKTTTIRMLTGV 56
Query: 64 LEPTSGEARVLGFDIVKEAREI--RKRINLVAEGERTLYWRLTAYENLRYFASIYYVPKK 121
L+PTSG+ RVLG+D+ +E ++ R+R+ +V E Y LTA +NL+ +Y +PK
Sbjct: 57 LKPTSGQVRVLGYDMTREPEKLKARQRMGIVPEMANP-YIDLTAMQNLKLMGELYGLPKW 115
Query: 122 VAEERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQS 181
E+R LL + L+++++ V +S+GM+QRL +A A+I DPE+ FLDEPT GLDV S
Sbjct: 116 EIEKRSIELLKLFELYEKRNIKVRGFSKGMRQRLVLAMAMIADPELYFLDEPTSGLDVIS 175
Query: 182 AIFVRELIKKLVEEEK---KTVLLTTHYMHEAEELCDRIAIIDHGRIIALDTPEGLKKLV 238
A +IK ++ +EK KT+ LTTH M++A ELC+RI II G+++A+DTPEGLK+L
Sbjct: 176 A----RIIKDIIRDEKKAGKTIFLTTHNMNDANELCERIGIIRKGKLVAIDTPEGLKRLT 231
Query: 239 RKDTIVEVRVK--NYNGENPFGLAKIKEEGEKVVLRGPLDEEDIPKLVEFLVKNNAKVLS 296
++ VEV +K ++ +++ G+KV + ++ + ++VE+ + K++S
Sbjct: 232 KEHLSVEVSLKPMMFDPSVLSSALRVERLGDKVKIYTNDPDKTVKEIVEYAKERKLKIVS 291
Query: 297 VEVKEPTLEDVFIKLTG 313
+ P+LEDVF+++ G
Sbjct: 292 IRTLSPSLEDVFVEIIG 308
>emb|CAC11998.1| (AL445065) ABC transporter related protein [Thermoplasma
acidophilum]
Length = 334
Score = 228 bits (574), Expect = 9e-59
Identities = 122/319 (38%), Positives = 198/319 (61%), Gaps = 15/319 (4%)
Query: 4 IEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKILTTL 63
I+ +NL K+YP I +A+ G+ +++ E++GLLG NGAGKTTTIK+LTT
Sbjct: 9 IKTENLTKIYPGGI----------KAVDGLNIEIEEAEIYGLLGKNGAGKTTTIKMLTTA 58
Query: 64 LEPTSGEARVLGFDIVKEAREIRKRINLVAEGERTLYWRLTAYENLRYFASIYYVPKKVA 123
++PTSG A + G+D+ K+ +IR+ I +V + + T L ENLR AS Y +PK+ A
Sbjct: 59 IDPTSGNAIIGGYDLRKDKEKIRRIIGVVPQ-DLTTDADLKGVENLRMIASFYNIPKQEA 117
Query: 124 EERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQSAI 183
E+RI++LL +V L D + V YS GM++RL + L+N P++LFLDEPTLGLDV +
Sbjct: 118 EQRIKDLLEIVDLSDWGNKYVSQYSGGMRKRLELICGLVNSPKILFLDEPTLGLDVNTRS 177
Query: 184 FVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRIIALDTPEGLKKLVRKDTI 243
+ + I+ + +E T++LT+HY+ E ++L DRI+IIDHG+I+ TP+ LK ++ D I
Sbjct: 178 KMWKYIRDIQKELGVTIILTSHYLEEVDQLADRISIIDHGKILITGTPDSLKASLKGDVI 237
Query: 244 V----EVRVKNYNGENPFGLAKIKEEGEKVVLRGPLDEEDIPKLVEFLVKNNAKVLSVEV 299
+ P L KV ++ + ++PK++E+L++ N +++ V
Sbjct: 238 TMEFNSMEDAELARSYPGSLEASVMGDAKVRMKVENSDTELPKILEYLLEKNVSPITINV 297
Query: 300 KEPTLEDVFIKLTGRGLRD 318
K+P+L++VF++ TG + +
Sbjct: 298 KKPSLDEVFLEYTGSSIEE 316
>pir||C72568 probable ATP-binding transport protein APE1829 - Aeropyrum pernix
(strain K1) >gi|5105519|dbj|BAA80832.1| (AP000062) 345aa
long hypothetical ATP-binding transport protein
[Aeropyrum pernix]
Length = 345
Score = 227 bits (572), Expect = 2e-58
Identities = 133/307 (43%), Positives = 182/307 (58%), Gaps = 20/307 (6%)
Query: 28 EALKGITFNVKKGELFGLLGPNGAGKTTTIKILTTLLEPTSGEARVLGFDIVKEAREIRK 87
EALKG++F+V +GE++ LGPNGAGKTTT++IL+TLL+P GEARV GFD+VKE E+RK
Sbjct: 26 EALKGVSFSVYEGEIYSFLGPNGAGKTTTVRILSTLLDPDGGEARVAGFDVVKERWEVRK 85
Query: 88 RINLVAEGERTLYWRLTAYENLRYFASIYYVPKKVAEERIRNLLHMVGLWD--RKDDLVM 145
RI ++ ER YW+LT ENL YF IY +P+ + RI+ +L +VGL D D
Sbjct: 86 RIGVMLSVERGFYWKLTGRENLYYFGRIYGIPQGELKSRIKEVLDLVGLTDLGGADKPFE 145
Query: 146 NYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQSAIFVRELIKKLVEEEKKTVLLTTH 205
S GMK RL +A+ L+ DPEVL LDEPTLGLD SA +R +I+ L E +T+ +TTH
Sbjct: 146 EMSLGMKARLGLARVLLKDPEVLILDEPTLGLDPASARTIRGVIRSLA-SEGRTIFITTH 204
Query: 206 YMHEAEELCDRIAIIDHGRIIALDTPEGLKKLVRKDTIVEVRVK-NYNGENPFGLAKIKE 264
M EAE + DR+ II GRI TP+ LK+ V +E RVK + + F E
Sbjct: 205 NMVEAEMISDRVGIIIGGRIAMEGTPDELKRRVFSSINLEFRVKASGHAAKKFFYDVKGE 264
Query: 265 EGEKV----------------VLRGPLDEEDIPKLVEFLVKNNAKVLSVEVKEPTLEDVF 308
G ++ V R E I ++ + K+L ++ EP+LEDVF
Sbjct: 265 YGNRIVGGVTFSDGILTFRVSVNRDEPAEPIIDRITRLAYQYRFKILEIKALEPSLEDVF 324
Query: 309 IKLTGRG 315
+ ++ G
Sbjct: 325 VAVSESG 331
>dbj|BAB05817.1| (AP001514) ABC transporter (ATP-binding protein) (daunorubicin
resistance) [Bacillus halodurans]
Length = 310
Score = 226 bits (570), Expect = 3e-58
Identities = 121/296 (40%), Positives = 186/296 (61%), Gaps = 7/296 (2%)
Query: 29 ALKGITFNVKKGELFGLLGPNGAGKTTTIKILTTLLEPTSGEARVLGFDIVKEAREIRKR 88
A++ + + GE GLLGPNGAGK+TTI +++TL++PTSGE ++ G +I+ +IRK
Sbjct: 16 AVQEVNMYLNSGESVGLLGPNGAGKSTTISMISTLIKPTSGEIKLNGINIISHPGDIRKI 75
Query: 89 INLVAEGERTLYWRLTAYENLRYFASIYYVPKKVAEERIRNLLHMVGLWDRKDDLVMNYS 148
+ +V + E LY L+AYENL++F S Y + K E RI++ L +VGL DR+ DLV +S
Sbjct: 76 LGVVPQ-ELALYQELSAYENLKFFGSTYKMKGKHLENRIQHALEIVGLKDRQKDLVKTFS 134
Query: 149 RGMKQRLAIAKALINDPEVLFLDEPTLGLDVQSAIFVRELIKKLVEEEKKTVLLTTHYMH 208
GMK+R+ IA AL+++P++L LDEPT+G+D QS + E ++ L E E TVL T+HYM
Sbjct: 135 GGMKRRINIAAALLHEPKILILDEPTVGIDPQSRNHILETVRTLNENEGTTVLYTSHYME 194
Query: 209 EAEELCDRIAIIDHGRIIALDTPEGLKKLVRKDTIVEVRVKN------YNGENPFGLAKI 262
E E+LCDR+ I+DHG IIA T E L ++ + ++V + N + G+ K+
Sbjct: 195 EVEQLCDRLYIMDHGEIIAAGTKEELLSILSTEDTIKVELSKIDETFVQNVKMIEGVRKV 254
Query: 263 KEEGEKVVLRGPLDEEDIPKLVEFLVKNNAKVLSVEVKEPTLEDVFIKLTGRGLRD 318
+ ++ + I +LV ++ +++ + P+LEDVF+ LTGR LRD
Sbjct: 255 EASHSQLKMIAKKGSHLIRELVHLTDQHQIQMIHFHTETPSLEDVFLHLTGRTLRD 310
>pir||E75122 hypothetical protein PAB1845 - Pyrococcus abyssi (strain Orsay)
>gi|5458205|emb|CAB49694.1| (AJ248285) hypothetical
protein [Pyrococcus abyssi]
Length = 305
Score = 225 bits (568), Expect = 5e-58
Identities = 133/314 (42%), Positives = 194/314 (61%), Gaps = 19/314 (6%)
Query: 1 MKAIEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKIL 60
MK IE++NL K Y K F+A+ ++ V+KG +FG LGPNGAGKTTTI +
Sbjct: 1 MKVIEIENLTKSYGK-----------FKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSM 49
Query: 61 TTLLEPTSGEARVLGFDIVKEAREIRKRINLVAEGERTLYWRLTAYENLRYFASIYYVPK 120
++ P SG R+LG+DI KE + ++R+ + E T+Y LTA+ NL +FAS Y +PK
Sbjct: 50 LGIIIPDSGSVRLLGYDIFKEPIKAKERLGFLPENA-TIYEELTAWRNLDFFASFYNIPK 108
Query: 121 KVAEERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQ 180
+ E+RI LL +VGLWD + V ++S+GMKQRL +A+ALINDPE+L LDEPT GLD Q
Sbjct: 109 QEKEKRIEELLKLVGLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQ 168
Query: 181 SAIFVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRIIALDTPEGLKKLVRK 240
A V+++I + +++ KTV ++H + E EEL D++ II G++ + T E +KK +
Sbjct: 169 GARLVKDIILE-QKKQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYME 227
Query: 241 DTIVEVRVKNYNG----ENPFGLAKIKEEGEKVVLRGPLDEEDIPKLVEFLVKNNAKVLS 296
E++V+ E P + K KV++ D +I L E L K VLS
Sbjct: 228 LEGYEIKVETKQPFPEIELPDVIRIEKIADNKVLIFAKSDIREI--LSEELSKRGITVLS 285
Query: 297 VEVKEPTLEDVFIK 310
+E++EP+LEDVF+K
Sbjct: 286 LEIEEPSLEDVFLK 299
>pir||D72492 probable ABC transporter ATP-binding protein APE2579 - Aeropyrum
pernix (strain K1) >gi|5106285|dbj|BAA81596.1|
(AP000064) 333aa long hypothetical ABC transporter
ATP-binding protein [Aeropyrum pernix]
Length = 333
Score = 220 bits (556), Expect = 1e-56
Identities = 133/300 (44%), Positives = 187/300 (62%), Gaps = 18/300 (6%)
Query: 27 FEALKGITFNVKKGELFGLLGPNGAGKTTTIKILTTLLEPTSGEARVLGFDIVKEAREIR 86
F A+ G++F + +GELF LLGPNGAGKTTTIK+L+TLL PTSGEA + G+ IV+E +R
Sbjct: 22 FRAVDGVSFRIARGELFSLLGPNGAGKTTTIKMLSTLLRPTSGEAWIAGYSIVREPGNVR 81
Query: 87 KRINLVAEGERTLYWRLTAYENLRYFASIYYVPKKVAEERIRNLLHMVGLWDRKDDLVMN 146
+ I LV + + T ++ ++N+ A +Y +P A ER R +L + L + V
Sbjct: 82 RVIGLVPQ-DLTADDEMSGWDNVYIQARLYGLPSSEARERTREVLDYLDLMEAAHRRVAT 140
Query: 147 YSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQSAIFVRELIKKLVEEEKK---TVLLT 203
YS GM+++L IA +L++ P+VLFLDEPTLGLDV S R + + +E+ K+ T+LLT
Sbjct: 141 YSGGMRRKLEIAMSLVHSPKVLFLDEPTLGLDVHS----RRSLWRYIEDLKRSAVTILLT 196
Query: 204 THYMHEAEELCDRIAIIDHGRIIALDTPEGLKKLVRKDTI-VEVRVKNYNG------ENP 256
THYM EAE L DR+AIID GRI+A TPE LK V+ +T+ +E++ Y +
Sbjct: 197 THYMEEAEMLSDRVAIIDRGRIVAEGTPEELKARVKGETVYIELKDPEYTEPLVLALKEK 256
Query: 257 FGLAKIKEEGEKVVLRGPLDEEDIPKLVEFLVKNNAKVLSVEVKEPTLEDVFIKLTGRGL 316
GL EG KV +R + +P+L L N V ++ + TLEDVFI+LTGR L
Sbjct: 257 LGLEPSVVEG-KVAVRVDRADTLLPELARAL--NGFPVKAISITRATLEDVFIELTGRTL 313
>pir||C69049 ABC transporter (ATP-binding protein) - Methanobacterium
thermoautotrophicum (strain Delta H)
>gi|2622479|gb|AAB85847.1| (AE000900) ABC transporter
(ATP-binding protein) [Methanobacterium
thermoautotrophicum]
Length = 319
Score = 217 bits (546), Expect = 2e-55
Identities = 123/294 (41%), Positives = 185/294 (62%), Gaps = 14/294 (4%)
Query: 29 ALKGITFNVKKGELFGLLGPNGAGKTTTIKILTTLLEPTSGEARVLGFDIVKEAREIRKR 88
AL ++F+V +GEL G++G NGAGKTT I+I+ +L P SG RV G D+ ++ ++
Sbjct: 33 ALDNLSFSVAEGELMGIIGHNGAGKTTAIRIIAGILHPDSGTVRVGGHDVTEDPLSVKSM 92
Query: 89 INLVAEGERTLYWRLTAYENLRYFASIYYVPKKVAEERIRNLLHMVGLWDRKDDLVMNYS 148
I + E E LY R A + LRYF +Y VP+ V ++RI LL +VG+ DR D + +S
Sbjct: 93 IGYLPE-EPNLYERFRAGDLLRYFGELYGVPRDVLDDRIAELLELVGMTDRAMDPINTFS 151
Query: 149 RGMKQRLAIAKALINDPEVLFLDEPTLGLDVQSAIFVRELIKKLVEEEKKTVLLTTHYMH 208
+G++QR+ IA+ALI+DP ++ DEPT+GLD +A +RE I+ L + KT++L THYM
Sbjct: 152 KGLRQRIGIARALIHDPPIIIFDEPTMGLDPATAFSIREFIRDL--KGSKTMILCTHYME 209
Query: 209 EAEELCDRIAIIDHGRIIALDTPEGLKKLVRKDTIVEVRVKNYN--GENPF----GLAKI 262
EAE LCDR+AII+ GRI+ + TP+ LK +R D ++EV+V++ + GE G+ +
Sbjct: 210 EAEYLCDRVAIINQGRILDIGTPDELKSKIRGDLVLEVKVRDISSVGEGDLMMIPGVKSV 269
Query: 263 KEEGEKVVLRGPLDEEDIPKLVEFLVKNNAKVLSVEVKEPTLEDVFIK-LTGRG 315
+ +G LR L E+ + +++ A V V +E TL DVFI+ L G G
Sbjct: 270 EVDGS--TLRVSL--ENRGAISGVIMELGANVSGVNTREATLNDVFIESLRGSG 319
>dbj|BAB04773.1| (AP001510) transposase (08)/ABC transporter (ATP-binding protein)
[Bacillus halodurans]
Length = 901
Score = 215 bits (543), Expect = 4e-55
Identities = 119/322 (36%), Positives = 196/322 (59%), Gaps = 20/322 (6%)
Query: 4 IEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKILTTL 63
IEV +L K Y + + +KGI ++KGE+ GLLGPNGAGK+TTI ++++L
Sbjct: 593 IEVIDLSKTYRNR-----------QVVKGINMFIEKGEMVGLLGPNGAGKSTTISMISSL 641
Query: 64 LEPTSGEARVLGFDIVKEAREIRKRINLVAEGERTLYWRLTAYENLRYFASIYYVPKKVA 123
++PTSG+ + G I K+++ IR + +V + E +Y LTA ENL +F IY + +
Sbjct: 642 IQPTSGDVLIKGGSIHKQSKAIRSILGVVPQ-EIAVYHDLTARENLAFFGKIYGLKGEEL 700
Query: 124 EERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQSAI 183
+ R+ + L +VGL +R++D V +S GMK+RL IA AL+++PE++ +DEPT+G+D QS
Sbjct: 701 KHRMESTLQLVGLEERQNDRVHTFSGGMKRRLNIAVALLHEPELIIMDEPTVGIDPQSRS 760
Query: 184 FVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRIIALDTPEGLKKLVRKDTI 243
+ E +K L +E + TV+ T+HYM E E LCDR+ I+D G +IA T + +K ++ +
Sbjct: 761 HILETVKTLNQEREMTVIYTSHYMEEVEYLCDRLYIMDRGEVIASGTKDEVKGILSSNQS 820
Query: 244 VEVRVKNYN-------GENPFGLAKIKEEGEKVVLRGPLDEEDIPKLVEFLVKNNAKVLS 296
+++ + Y+ ++P ++ +K + + P E + L + + S
Sbjct: 821 IKLTTEMYSPRFLTALQDHPV-ISSVKVMEQTFTIIVPKRENILDDLFMLAKETGTTLKS 879
Query: 297 VEVKEPTLEDVFIKLTGRGLRD 318
++++ PTLEDVF+ LTGR LRD
Sbjct: 880 IDIQAPTLEDVFLHLTGRKLRD 901
>dbj|BAA83955.1| (AB024563) YFIL [Bacillus halodurans]
Length = 310
Score = 215 bits (541), Expect = 7e-55
Identities = 119/322 (36%), Positives = 195/322 (59%), Gaps = 20/322 (6%)
Query: 4 IEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKILTTL 63
IEV +L K Y + + +KGI ++KGE+ GLLGPNGAGK+TTI ++++L
Sbjct: 2 IEVIDLSKTYRNR-----------QVVKGINMFIEKGEMVGLLGPNGAGKSTTISMISSL 50
Query: 64 LEPTSGEARVLGFDIVKEAREIRKRINLVAEGERTLYWRLTAYENLRYFASIYYVPKKVA 123
++PTSG+ + G I K ++ IR + +V + E +Y LTA ENL +F IY + +
Sbjct: 51 IQPTSGDVLIKGGSIHKRSKAIRSILGVVPQ-EIAVYHDLTARENLAFFGKIYGLKGEEL 109
Query: 124 EERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQSAI 183
+ R+ + L +VGL +R++D V +S GMK+RL IA AL+++PE++ +DEPT+G+D QS
Sbjct: 110 KHRMESTLQLVGLEERQNDRVHTFSGGMKRRLNIAVALLHEPELIIMDEPTVGIDPQSRS 169
Query: 184 FVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRIIALDTPEGLKKLVRKDTI 243
+ E +K L +E + TV+ T+HYM E E LCDR+ I+D G +IA T + +K ++ +
Sbjct: 170 HILETVKTLNQEREMTVIYTSHYMEEVEYLCDRLYIMDRGEVIASGTKDEVKGILSSNQS 229
Query: 244 VEVRVKNYN-------GENPFGLAKIKEEGEKVVLRGPLDEEDIPKLVEFLVKNNAKVLS 296
+++ + Y+ ++P ++ +K + + P E + L + + S
Sbjct: 230 IKLTTEMYSPRFLTALQDHPV-ISSVKVMEQTFTIIVPKRENILDDLFMLAKETGTTLKS 288
Query: 297 VEVKEPTLEDVFIKLTGRGLRD 318
++++ PTLEDVF+ LTGR LRD
Sbjct: 289 IDIQAPTLEDVFLHLTGRKLRD 310
>pir||H71008 probable ATP-binding transport protein - Pyrococcus horikoshii
>gi|3257789|dbj|BAA30472.1| (AP000006) 308aa long
hypothetical ATP-binding transport protein [Pyrococcus
horikoshii]
Length = 308
Score = 212 bits (534), Expect = 5e-54
Identities = 123/314 (39%), Positives = 189/314 (60%), Gaps = 19/314 (6%)
Query: 1 MKAIEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKIL 60
M AIEV+ L K Y K F+A+ ++F V +G +FG LGPNGAGKTTTI +
Sbjct: 1 MYAIEVEKLTKSYGK-----------FKAIDNLSFVVDEGIVFGFLGPNGAGKTTTILSM 49
Query: 61 TTLLEPTSGEARVLGFDIVKEAREIRKRINLVAEGERTLYWRLTAYENLRYFASIYYVPK 120
++ P SG+ R+LG+DI KE + ++R+ + E T+Y LTA+ NL +FAS Y + K
Sbjct: 50 LGIIIPDSGDVRILGYDIFKEPLKAKERLGFLPENA-TIYEELTAWRNLDFFASFYRMSK 108
Query: 121 KVAEERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQ 180
+ E+RI LL +VGLWD + +S+GM+QRL +A+ALINDPE+L LDEPT GLD +
Sbjct: 109 QEKEKRIEELLKLVGLWDVRYRKAKTFSKGMRQRLLLAQALINDPELLILDEPTSGLDPE 168
Query: 181 SAIFVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRIIALDTPEGLKKLVRK 240
A V+++I++ ++ KTV ++H + E EEL D++ II G++ + T E +KK +
Sbjct: 169 GARLVKDIIRE-QRKQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEIKKQYME 227
Query: 241 DTIVEVRVKNYNG----ENPFGLAKIKEEGEKVVLRGPLDEEDIPKLVEFLVKNNAKVLS 296
E++++ E P + K K ++ D + + E L K ++S
Sbjct: 228 LEGYEIKIETKQPLPELEIPDIIRIEKTTENKAIIFAKSDIRE--SISEELAKKGITIIS 285
Query: 297 VEVKEPTLEDVFIK 310
+E++EP+LEDVF+K
Sbjct: 286 LEIEEPSLEDVFLK 299
>pir||G69803 ABC transporter (ATP-binding protein) homolog yfiL - Bacillus
subtilis >gi|1817536|dbj|BAA11402.1| (D78508) YfiL
[Bacillus subtilis] >gi|2633155|emb|CAB12660.1| (Z99108)
similar to ABC transporter (ATP-binding protein)
[Bacillus subtilis]
Length = 311
Score = 209 bits (527), Expect = 3e-53
Identities = 122/323 (37%), Positives = 189/323 (57%), Gaps = 21/323 (6%)
Query: 4 IEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKILTTL 63
++ +N++K Y KK +KGI+F++KKGE FGLLGPNGAGK+TTI +++ L
Sbjct: 2 LQAENIKKAYGKKT-----------IVKGISFSLKKGESFGLLGPNGAGKSTTISMISGL 50
Query: 64 LEPTSGEARVLGFDIVKEAREIRKRINLVAEGERTLYWRLTAYENLRYFASIYYVPKKVA 123
+ SG V G+ I KE + +++I +V + E LY LTA+ENL ++ +Y + A
Sbjct: 51 VPHDSGNITVGGYVIGKETAKAKQKIGIVPQ-EIALYPTLTAHENLMFWGKMYGLTHDEA 109
Query: 124 EERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQSAI 183
++R +L VGL +R D + +S GMK+R+ I AL++ PE+L +DEPT+G+D QS
Sbjct: 110 KKRAAEVLEYVGLTERAKDKIETFSGGMKRRINIGAALMHKPELLIMDEPTVGIDPQSRN 169
Query: 184 FVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRIIALDTPEGLKKLVRKDTI 243
+ E +K+L E TV+ T+HYM E E LCDRI IID G +IA+ T L + DTI
Sbjct: 170 HILETVKQL-NETGMTVIYTSHYMEEVEFLCDRIGIIDQGEMIAIGTKTDLCSRLGGDTI 228
Query: 244 VEVRVKNYNGENPFGLAKIKEEGE--------KVVLRGPLDEEDIPKLVEFLVKNNAKVL 295
+++ V N + + + K+ + E+ + L+ ++ +L
Sbjct: 229 IQLTVSGINEAFLVAIRSLAHVNDVTVHELELKIDISAAHHEKVVTSLLAEATAHHINLL 288
Query: 296 SVEVKEPTLEDVFIKLTGRGLRD 318
S++V+EP LE +F+ LTGR LRD
Sbjct: 289 SLQVQEPNLERLFLNLTGRTLRD 311
>dbj|BAA95019.1| (AB033992) ATP-binding protein [Streptomyces kasugaensis]
Length = 329
Score = 208 bits (525), Expect = 5e-53
Identities = 119/298 (39%), Positives = 183/298 (60%), Gaps = 15/298 (5%)
Query: 29 ALKGITFNVKKGELFGLLGPNGAGKTTTIKILTTLLEPTSGEARVLGFDIVKEAREIRKR 88
AL + +V +GE G+LGPNGAGKTT ++IL+T+L PTSG A V G D+ EA ++R+R
Sbjct: 35 ALDSVNLSVPEGETHGVLGPNGAGKTTLVRILSTMLLPTSGRALVAGHDVTTEADQVRRR 94
Query: 89 INLVAEGERTLYWRLTAYENLRYFASIYYVPKKVAEERIRNLLHMVGLWDRKDDLVMNYS 148
I +V G+ LY R+TA +NL ++A++Y V V + R + LL VGL DR D+ V +S
Sbjct: 95 IGIVFGGDNGLYTRITARQNLVFWATMYRVDASVVKRRSQELLERVGLADRADEPVEGFS 154
Query: 149 RGMKQRLAIAKALINDPEVLFLDEPTLGLDVQSAIFVRELIKKLVEEEKKTVLLTTHYMH 208
RGM+QRL +A+ LI DP VLFLDEPT+G+D + R+L+ +L + E +T+L+TTH M
Sbjct: 155 RGMRQRLHLARGLIGDPAVLFLDEPTMGMDPLATRDFRDLVHEL-KAEGRTILITTHDMS 213
Query: 209 EAEELCDRIAIIDHGRIIALDTPEGLKKLVRKDTIVEVRVKNYNGENPFGLA-------- 260
EAE LCDR++++DHG I+ + + +++ ++V ++ LA
Sbjct: 214 EAEALCDRVSLVDHGSILVTEPTATIGRMLSGHDRIDVTLREDQSPLLSELAGLPQVERV 273
Query: 261 -KIKEEGEKVVLRGPLDEEDIPKLVEFLVKNNAKVLSVEVKEPTLEDVFIKLTG-RGL 316
K+ E G + D P ++ +L+ +A + ++ PTLE+V++ L G RGL
Sbjct: 274 DKLSEPGSVRIHTVSADAN--PVVLRWLL--DAGIDALRTGRPTLEEVYVHLVGNRGL 327
>gb|AAK42768.1| ABC transporter, ATP binding protein [Sulfolobus solfataricus]
Length = 309
Score = 202 bits (508), Expect = 5e-51
Identities = 121/315 (38%), Positives = 192/315 (60%), Gaps = 30/315 (9%)
Query: 1 MKAIEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKIL 60
+K I++ K+ K+I +A+ ++F +++ L+GPNGAGKTT IK+L
Sbjct: 2 IKTIDISKTFKIKNKEI----------KAVDDVSFEIERNSTGALVGPNGAGKTTIIKML 51
Query: 61 TTLLEPTSGEARVLGFDIVKEAREIRKRINLVAEGERTLYWRLTAYENLRYFASIYYVPK 120
+TL+ P+SG+A V G+ I KE +++R+ I LV ER Y+RLTA ENL +FAS+ +
Sbjct: 52 STLIIPSSGDALVNGYSITKEEKKVRESIGLVTVSERLFYYRLTALENLIFFASLQNLSL 111
Query: 121 KVAEERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQ 180
A +R + +L +VGL + + M +S GM+++LA+A+ALI DP VL LDEPTLGLD
Sbjct: 112 SDARKRAKEVLEIVGLSEWGNIPYMKFSTGMQRKLALARALITDPPVLLLDEPTLGLDPL 171
Query: 181 SAIFVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRIIALDTPEGLKKLVRK 240
SA R+L++++ + KT+LLT+HYM + EEL ++I ++ G+ IA + LK + K
Sbjct: 172 SARMFRDLVRRIGRD--KTILLTSHYMKDIEELAEKIILLKKGKAIAEGNKDNLKNYLGK 229
Query: 241 DTIVEVRVKNYNGENPFGLAK--IKEEGEKVVLRGPLDEEDIPKLVEFLVKNNAKVLSVE 298
++EV V Y P L K ++ +LR P E+++ +L ++ V ++
Sbjct: 230 --VIEVEVNEY----PLTLGKYVVQTSTNYYILRIP--EKELDELKDYRV--------IK 273
Query: 299 VKEPTLEDVFIKLTG 313
+EP+LEDV+I L G
Sbjct: 274 EEEPSLEDVYIYLIG 288
>gi|11498898 ABC transporter, ATP-binding protein [Archaeoglobus fulgidus]
>gi|7445659|pir||C69412 ABC transporter, ATP-binding
protein homolog - Archaeoglobus fulgidus
>gi|2649279|gb|AAB89946.1| (AE001014) ABC transporter,
ATP-binding protein [Archaeoglobus fulgidus]
Length = 303
Score = 199 bits (501), Expect = 3e-50
Identities = 115/283 (40%), Positives = 174/283 (60%), Gaps = 6/283 (2%)
Query: 29 ALKGITFNVKKGELFGLLGPNGAGKTTTIKILTTLLEPTSGEARVLGFDIVKEAREIRKR 88
AL+GI +++ G +FGLLGPNGAGKTT I IL+T+L PT GE R+LG D K R++R+R
Sbjct: 23 ALRGIDLDIEDGVIFGLLGPNGAGKTTLISILSTILIPTKGEVRILGMDAFKNTRKVRER 82
Query: 89 INLVAEGERTLYWRLTAYENLRYFASIYYVPKKVAEERIRNLLHMVGLWDRKDDLVMNYS 148
IN ++ G R + W + YE LR++A Y + + +R+ + + +++ D + S
Sbjct: 83 IN-ISSGVR-MPWGMKVYECLRFYAMCYGITDRRVVDRVISEFELEEHRNKRFD---DLS 137
Query: 149 RGMKQRLAIAKALINDPEVLFLDEPTLGLDVQSAIFVRELIKKLVEEEKKTVLLTTHYMH 208
G KQ+ +A+A +NDPEV+FLDEPT LD A +R++I ++ EE+ T++LTTH M
Sbjct: 138 TGNKQKANLARAFLNDPEVVFLDEPTANLDPDMAKKIRQMILRIKEEKDVTIVLTTHNMR 197
Query: 209 EAEELCDRIAIIDHGRIIALDTPEGLKKLVRKDTIVEVRVKNYNGENPFGLAKIKEEGEK 268
EAE LCDRIA I G+I+A T E LKK + V +++K N + + +G
Sbjct: 198 EAEMLCDRIAFIKEGKIVAEGTSEELKKYTKMSERVILKLKG-NAKKLHIPYPYRMDGNT 256
Query: 269 VVLRGPLDEEDIPKLVEFLVKNNAKVLSVEVKEPTLEDVFIKL 311
++ E+ +P +V L + V S +++E TLEDVFI+L
Sbjct: 257 LIAFVEDAEKALPSIVVRLAEQGVFVESAKMEEITLEDVFIEL 299
>pir||B71030 probable ATP-binding transport protein - Pyrococcus horikoshii
>gi|3257959|dbj|BAA30642.1| (AP000006) 226aa long
hypothetical ATP-binding transport protein [Pyrococcus
horikoshii]
Length = 226
Score = 198 bits (497), Expect = 1e-49
Identities = 100/219 (45%), Positives = 152/219 (68%), Gaps = 2/219 (0%)
Query: 28 EALKGITFNVKKGELFGLLGPNGAGKTTTIKILTTLLEPTSGEARVLGFDIVKEAREIRK 87
+AL+GITF++++GE+FGL+GPNGAGK+TT+KIL TLL PT G+A V GFD+VKEA E+RK
Sbjct: 2 KALRGITFSIEEGEIFGLIGPNGAGKSTTLKILATLLRPTGGKAEVFGFDVVKEADEVRK 61
Query: 88 RINLVAEGERTLYWRLTAYENLRYFASIYYVPKKVAEERIRNLLHMVGLWDRKDDLVMNY 147
I+ + E E Y RLT E L++ A +Y + AE+ ++ + + GL DR D + Y
Sbjct: 62 LISYLPE-EAGAYKRLTGLEYLKFMAKLYAKDSRKAEKMLKLGIELSGLGDRLRDKISTY 120
Query: 148 SRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQSAIFVRELIKKLVEEEKKTVLLTTHYM 207
S+GM +RL +A+AL+ P++ LDEPT GLD+ +A +R +I++ +E T L+++H M
Sbjct: 121 SKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNAFEIRRIIREF-SKEGVTFLISSHNM 179
Query: 208 HEAEELCDRIAIIDHGRIIALDTPEGLKKLVRKDTIVEV 246
E E LCDR+A+I G+I+ + +P LK+ + + + EV
Sbjct: 180 LEVEYLCDRVALIHKGKIVEVGSPHELKEKHKAENLEEV 218
>pir||A75184 ATP-binding transport protein PAB0434 - Pyrococcus abyssi (strain
Orsay) >gi|5458062|emb|CAB49552.1| (AJ248284)
ATP-BINDING TRANSPORT PROTEIN [Pyrococcus abyssi]
Length = 244
Score = 197 bits (496), Expect = 1e-49
Identities = 107/244 (43%), Positives = 155/244 (62%), Gaps = 13/244 (5%)
Query: 3 AIEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKILTT 62
A+ V NL K Y K +AL+G++F +++GE+FGL+GPNGAGK+TT+KIL T
Sbjct: 6 AVAVSNLEKDYGK-----------VKALRGVSFQIEEGEIFGLIGPNGAGKSTTLKILAT 54
Query: 63 LLEPTSGEARVLGFDIVKEAREIRKRINLVAEGERTLYWRLTAYENLRYFASIYYVPKKV 122
LL PT G A V G D+VKEA E+RK I+ + E E Y RLT E L + A +Y +
Sbjct: 55 LLHPTGGRAEVFGHDVVKEASEVRKLISYLPE-EAGAYKRLTGLEYLEFMAKLYAKDSRK 113
Query: 123 AEERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQSA 182
AE+ ++ + + GL +R +D V YS+GM +RL +A+AL+ P++ LDEPT GLD+ +A
Sbjct: 114 AEKMLKLGIELSGLGERLNDKVSTYSKGMVRRLLLARALMVKPKLAILDEPTSGLDIMNA 173
Query: 183 IFVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRIIALDTPEGLKKLVRKDT 242
+R IK+ +E T L+++H M E E LCDR+A+I GRI+ + TP LK+ +
Sbjct: 174 FEIRRTIKEF-SKEGVTFLISSHNMLEVEYLCDRVALIHKGRILEVGTPRELKERYNAEN 232
Query: 243 IVEV 246
+ EV
Sbjct: 233 LEEV 236
>dbj|BAB07612.1| (AP001520) ABC transporter (ATP-binding protein) [Bacillus
halodurans]
Length = 282
Score = 194 bits (487), Expect = 2e-48
Identities = 119/313 (38%), Positives = 177/313 (56%), Gaps = 36/313 (11%)
Query: 4 IEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKILTTL 63
IEVK+LRK + K EALK ++F++K+GE FG LGP+GAGKTTTIKILT
Sbjct: 5 IEVKHLRKTFDGK-----------EALKDVSFSIKRGETFGFLGPSGAGKTTTIKILTGQ 53
Query: 64 LEPTSGEARVLGFDIVKEAREIRKRINLVAEGERTLYWRLTAYENLRYFASIYYVPKKVA 123
+ GE + G + + R+ V LY RLT +NL + +Y VP
Sbjct: 54 VRSFDGEVALFGKPVHRLKRKTFMSQIGVLTDNSGLYERLTVQDNLSMYCKLYSVP---- 109
Query: 124 EERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQSAI 183
E RI ++L VGL D + +V S+GMKQR+ +A+A+++ P++LFLDEPT LD S+
Sbjct: 110 ERRIHDVLAEVGLRDERAKIVSKLSKGMKQRVILARAMLHKPDLLFLDEPTSALDPASSH 169
Query: 184 FVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRIIALDTPEGLKKLVRKDTI 243
+ + +++L E T+ LTTH M EAE++CDR+A +D G+I +DTPE L +L D+
Sbjct: 170 MIHDSLRRL-NREGTTIFLTTHDMLEAEKICDRVAFLDQGKIRVMDTPEQL-RLTYADST 227
Query: 244 VEVRVKNYNGENPFGLAKIKEEGEKVVLRGPLDEEDIPKLVEFLVKNNAKVLSVEVKEPT 303
+ + +K G + ++ LD + V N ++LS+ EPT
Sbjct: 228 ITLLLKG---------------GRREIVENNLDGANTIS----QVMKNGELLSIHSNEPT 268
Query: 304 LEDVFIKLTGRGL 316
L DVF+++TG+ L
Sbjct: 269 LGDVFLRVTGKEL 281
>pir||B69065 ABC transporter (ATP-binding, daunorubicin resistance) -
Methanobacterium thermoautotrophicum (strain Delta H)
>gi|2622603|gb|AAB85962.1| (AE000909) ABC transporter
(ATP-binding [Methanobacterium thermoautotrophicum]
Length = 350
Score = 190 bits (479), Expect = 1e-47
Identities = 124/361 (34%), Positives = 190/361 (52%), Gaps = 63/361 (17%)
Query: 3 AIEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKILTT 62
AIE +L K+Y F+A+ + ++K +FG LGPNGAGKTTTIK+LT
Sbjct: 4 AIETFDLTKVYGD-----------FKAVDSLNMKIEKNSIFGFLGPNGAGKTTTIKMLTC 52
Query: 63 LLEPTSGEARVLGFDIVKEAREIRKRINLVAEGERTLYWRLTAYENLRYFASIYYVPKKV 122
L+ P+SG ARV G+DI+K E+R++I +V + + +LY LTA EN+ A Y +P+ +
Sbjct: 53 LIPPSSGTARVAGYDILKNPDEVRQQIGMVPQ-KVSLYEDLTARENVEMCADFYGMPEDL 111
Query: 123 AEERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQSA 182
E RI L+ +V + D V S G +Q++++ +LI+ P++LFLDEPT+GLD +
Sbjct: 112 KESRIEELMELVDIKYAADKPVGQMSGGQQQKVSLVASLIHQPDILFLDEPTIGLDPTTK 171
Query: 183 IFVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRIIALDTPEGLKKLVRKDT 242
+ +LI +L T++L +H M+E E LCD + II+ G + A DTP+GLK V K+
Sbjct: 172 RVLWDLIDEL-NSSGHTIILCSHDMYEVELLCDYVGIINQGVLAAFDTPQGLKDTVIKEE 230
Query: 243 IVEVRVKNYNG-------ENPFGLAKIKEE-------------------------GEKVV 270
+R K G E P + +E E
Sbjct: 231 -ESLRAKEIGGILDRIDKETPESERRAIQEIKKSERICAGKEISMLIVNLTDDLLSELEA 289
Query: 271 LRGPLD-----------------EEDIPKLVEFLVKNNAKVLSVEVKEPTLEDVFIKLTG 313
L LD E + ++ +++NNA++ S+ K+P+LEDVF+K+TG
Sbjct: 290 LPVTLDVKKHHTGRIILELDETCETAVNDVLAAVIRNNARITSISTKDPSLEDVFMKVTG 349
Query: 314 R 314
R
Sbjct: 350 R 350
>pir||S76278 ABC-type transport protein sll0759 - Synechocystis sp. (strain PCC
6803) >gi|1001505|dbj|BAA10130.1| (D64000) ABC
transporter [Synechocystis sp.]
Length = 347
Score = 188 bits (472), Expect = 9e-47
Identities = 119/330 (36%), Positives = 188/330 (56%), Gaps = 28/330 (8%)
Query: 3 AIEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKILTT 62
A++VK LRK Y IP A+K I+F V +GE+FGLLGPNGAGKTTTI+ L T
Sbjct: 10 AVQVKQLRKKYGA-IP----------AVKDISFAVPRGEIFGLLGPNGAGKTTTIRCLCT 58
Query: 63 LLEPTSGEARVLGFDIVKEAREIRKRINLVAEGERTLYWRLTAYENLRYFASIYYVPKKV 122
L +P GE + G +++ + R+ R+R+ VA+ E + LT E L+ AS+Y++
Sbjct: 59 LAKPDGGELWIDGVNVLSDPRQARRRLGYVAQ-EVAIDKILTGRELLQLQASLYHLDAIS 117
Query: 123 AEERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQSA 182
+++RI LL ++GL D YS G+K+RL +A L++ P VL LDEP++GLD++S
Sbjct: 118 SQKRIDQLLDILGLTAYADQKTGTYSGGLKKRLDLAAGLLHQPTVLVLDEPSVGLDIESR 177
Query: 183 IFVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRIIALDTPEGLKKLVRKDT 242
+ E +++L + TV++T+HY+ E + L DR+AIID G +IA TP LK V D
Sbjct: 178 FILWEFLRQL-RDAGTTVVITSHYLEEIDALADRLAIIDQGTVIATGTPTELKDRVGGDR 236
Query: 243 IVEVRVKNYNGENPF--------GLAKIKE------EGEKVVLRGPLDEEDIPKLVEFLV 288
V +R+K + + LA ++E +G + L + ++ + L+
Sbjct: 237 -VTLRIKEFTADQEAEKASQILRSLAFVQEVIVNQAQGNSLNLVVTPQSNPLSQIEKALL 295
Query: 289 KNNAKVLSVEVKEPTLEDVFIKLTGRGLRD 318
+ + S+ P+L+DV++ TG+ L D
Sbjct: 296 ADGLPIFSLAQSRPSLDDVYLAATGKTLMD 325
>emb|CAC08315.1| (AL392149) putative ABC transport system ATP-binding protein
[Streptomyces coelicolor A3(2)]
Length = 336
Score = 186 bits (468), Expect = 3e-46
Identities = 126/322 (39%), Positives = 174/322 (53%), Gaps = 27/322 (8%)
Query: 3 AIEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKILTT 62
A+ + L K Y K AL G V++G + GLLGPNGAGKTT ++IL+T
Sbjct: 6 AVRAEGLEKRYGDK-----------RALDGFDLTVREGTVHGLLGPNGAGKTTAVRILST 54
Query: 63 LLEPTSGEARVLGFDIVKEAREIRKRINLVAEGERTLYWRLTAYENLRYFASIYYVPKKV 122
L+ G A V G DI ++ARE+R RI L + + LT +NL F ++++ +
Sbjct: 55 LIRLDGGRAEVAGLDIARQAREVRARIGLTGQ-YAAVDEVLTGRQNLEMFGRLFHLGGRR 113
Query: 123 AEERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQSA 182
A R LL L D D V YS GM++RL +A ++I P VLFLDEPT GLD +S
Sbjct: 114 ARARAVELLEQFDLTDAADRGVGKYSGGMRRRLDLAASMILAPSVLFLDEPTTGLDPRSR 173
Query: 183 IFVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRIIALDTPEGLKKLVRKDT 242
V E +++LV TVLLTT Y+ EA++L RI +ID GR IA DTP+GLK LV D
Sbjct: 174 GEVWESVRELV-ASGTTVLLTTQYLEEADKLASRITVIDRGRAIADDTPDGLKNLVGGDR 232
Query: 243 IVEV--------RVKNYNGENPFGLAKIKEEGEKVVLRGPLDEEDIPKLVEF---LVKNN 291
I V RV G +++EE +V P+ + +P L E L
Sbjct: 233 IEVVVADHAEIPRVVKTVARVCKGEPEVEEEALRV--HAPVTDR-VPALTEVARTLQDEG 289
Query: 292 AKVLSVEVKEPTLEDVFIKLTG 313
V + ++ P+L+DVF++LTG
Sbjct: 290 VAVEDIGLRRPSLDDVFLRLTG 311
>gi|11498736 ABC transporter, ATP-binding protein [Archaeoglobus fulgidus]
>gi|7445762|pir||G69391 ABC transporter, ATP-binding
protein homolog - Archaeoglobus fulgidus
>gi|2649451|gb|AAB90107.1| (AE001025) ABC transporter,
ATP-binding protein [Archaeoglobus fulgidus]
Length = 294
Score = 184 bits (462), Expect = 1e-45
Identities = 115/313 (36%), Positives = 176/313 (55%), Gaps = 20/313 (6%)
Query: 1 MKAIEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKIL 60
M IEV+NL K++ F AL GI+ V++GE+FG LGPNGAGKTTTI
Sbjct: 1 MAQIEVENLTKVF-----------NGFRALDGISLVVERGEIFGFLGPNGAGKTTTINCC 49
Query: 61 TTLLEPTSGEARVLGFDIVKEAREIRKRINLVAEGERTLYWRLTAYENLRYFASIYYVPK 120
L++PTSG R+ G D+ ++ E+++ + E Y LTA +NL YF+ Y PK
Sbjct: 50 LGLIKPTSGSVRIAGMDVEEKPVEVKEICGYLPENYG-FYPNLTARQNLLYFSEFYANPK 108
Query: 121 KVAEERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQ 180
+E LL +VGL D D V +SRGMKQRLA+A+ALINDPEV+FLDEPT GLD Q
Sbjct: 109 DNVDE----LLALVGLQDSADKKVGEFSRGMKQRLALAQALINDPEVVFLDEPTNGLDPQ 164
Query: 181 SAIFVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRIIALDTPEGLKKLVRK 240
R++I++L ++ KT ++H + E E+C + II+ GRI+ + L +
Sbjct: 165 GIADFRKIIREL-NQKGKTFFFSSHILSEVREVCSVVGIINRGRIVKVGKISELSGSMEV 223
Query: 241 DTIVEVRVKNYNGENPFGLAKIKEEGEKVVLRGPLDEEDIPKLVEFLVKNNAKVLSVEVK 300
E R + + FG + E + V++ ++ + ++ L ++ V + ++
Sbjct: 224 VVQTEPRA-DESLLREFGEVEYDESRDVYVIK--VESDCRVEISRTLFEHGFVVKELSLR 280
Query: 301 EPTLEDVFIKLTG 313
EP+LE +++ + G
Sbjct: 281 EPSLEKIYLSMVG 293
>pir||E72364 ABC transporter, ATP-binding protein - Thermotoga maritima (strain
MSB8) >gi|4981058|gb|AAD35629.1|AE001729_9 (AE001729)
ABC transporter, ATP-binding protein [Thermotoga
maritima]
Length = 244
Score = 183 bits (461), Expect = 2e-45
Identities = 104/246 (42%), Positives = 153/246 (61%), Gaps = 13/246 (5%)
Query: 1 MKAIEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKIL 60
M A+ VK+LRK KK E LKGI+F +++GE+FGL+GPNGAGKTTT++I+
Sbjct: 1 MGAVVVKDLRKRIGKK-----------EILKGISFEIEEGEIFGLIGPNGAGKTTTLRII 49
Query: 61 TTLLEPTSGEARVLGFDIVKEAREIRKRINLVAEGERTLYWRLTAYENLRYFASIYYVPK 120
+TL++P+SG V G ++V+E E+RK I+ + E E Y + E LR+ A Y
Sbjct: 50 STLIKPSSGIVTVFGKNVVEEPHEVRKLISYLPE-EAGAYRNMQGIEYLRFVAGFYASSS 108
Query: 121 KVAEERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQ 180
EE + + GL ++ D V YS+GM ++L IA+AL+ +P + LDEPT GLDV
Sbjct: 109 SEIEEMVERATEIAGLGEKIKDRVSTYSKGMVRKLLIARALMVNPRLAILDEPTSGLDVL 168
Query: 181 SAIFVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRIIALDTPEGLKKLVRK 240
+A VR+++K+ +E T+L+++H M E E LCDRIA+I +G I+ T E LK+ +
Sbjct: 169 NAREVRKILKQ-ASQEGLTILVSSHNMLEVEFLCDRIALIHNGTIVETGTVEELKERYKA 227
Query: 241 DTIVEV 246
I EV
Sbjct: 228 QNIEEV 233
>emb|CAB37661.1| (AJ224479) cdd4-like protein [Bacillus sphaericus]
Length = 311
Score = 183 bits (461), Expect = 2e-45
Identities = 112/320 (35%), Positives = 179/320 (55%), Gaps = 28/320 (8%)
Query: 4 IEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKILTTL 63
++ +NL K + K+ +A+ I ++KGE++G LGPNGAGKTTTI++L L
Sbjct: 13 VQTQNLSKNFGKE-----------QAVSNINLQIRKGEIYGFLGPNGAGKTTTIRMLLGL 61
Query: 64 LEPTSGEARVLGFDIVKEAREIRKRINLVAEGERTLYWRLTAYENLRYFASIYYVPKKVA 123
++P+SG ++ DIVK+ +I + + E + Y LTAYENL I VPK
Sbjct: 62 MKPSSGTIKIFQKDIVKDRIQILANVGSLVENP-SYYPHLTAYENLEALRKILGVPKT-- 118
Query: 124 EERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQSAI 183
RI +L V L + + V +S GMKQRL IA AL+++PE+L LDEPT GLD I
Sbjct: 119 --RIDEVLQTVRLKEAANKKVKGFSLGMKQRLGIAAALLHNPELLILDEPTNGLDPSGII 176
Query: 184 FVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRIIALDTPEGLKKLVRKDTI 243
+R LIK+L +E T+++++H + E +++ ++ I+ G +I D+ EG++K +
Sbjct: 177 EIRNLIKRLPKEYGMTIIISSHLLSEIDQMATQVGIVSKGTLIFQDSIEGMRKFAQP--- 233
Query: 244 VEVRVKNYNGENPFGLAKIKEEGEK------VVLRGPLDEEDIPKLVEFLVKNNAKVLSV 297
+V K NGE G + G K V+ +E + +V+ LV+ V V
Sbjct: 234 -KVTFKVSNGEK--GWRSLLANGIKANYQDDVIFLEECSDEKVAHIVQVLVQEGISVFRV 290
Query: 298 EVKEPTLEDVFIKLTGRGLR 317
E ++ +LED+F+++T L+
Sbjct: 291 EEEKRSLEDIFLQMTAGELK 310
>gb|AAG32068.1|AF317790_1 (AF317790) ATP-binding transporter AviABCI [Streptomyces
viridochromogenes]
Length = 323
Score = 183 bits (459), Expect = 3e-45
Identities = 117/329 (35%), Positives = 176/329 (52%), Gaps = 33/329 (10%)
Query: 3 AIEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKILTT 62
A+ + LRK Y + AL G V +G + LLGPNGAGKTT ++IL+T
Sbjct: 8 ALVAEGLRKTYGSET-----------ALDGFDLVVPEGTVCALLGPNGAGKTTAVRILST 56
Query: 63 LLEPTSGEARVLGFDIVKEAREIRKRINLVAEGERTLYWRLTAYENLRYFASIYYVPKKV 122
LL+P G A V G D+ +EA E+R+ I + + + LT ENL + +Y+V ++
Sbjct: 57 LLKPDGGRALVAGLDVTREAAEVRRNIGVTGQYP-AVEEILTGRENLEMWGRLYHVGRRE 115
Query: 123 AEERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQSA 182
A+ R LL L + D + +YS GM++RL +A P+VLFLDEPT GLD ++
Sbjct: 116 AQRRTEELLEQFDLTEAADKRLKHYSGGMRRRLDLAAGFFTVPKVLFLDEPTTGLDPRNR 175
Query: 183 IFVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRIIALDTPEGLKKLVRKDT 242
V ++++ +V E+ TVLLTT Y+ EA+ L D+I++ID GR + TPE LK LV D
Sbjct: 176 NEVWKMVRSMV-EQGTTVLLTTQYLEEADRLADQISVIDAGRGVVEGTPETLKSLVGGDR 234
Query: 243 IV------------EVRVKNYNGENPFGLAKIKEEGEKVVLRGPLDEE--DIPKLVEFLV 288
IV +V + G P + + E + P+ + D+ ++V+ L
Sbjct: 235 IVVTLAATEDLSAAAAQVARFTGTEP------EVDAEARRIDAPVRDRVGDLVEIVQLLR 288
Query: 289 KNNAKVLSVEVKEPTLEDVFIKLTGRGLR 317
V+ V ++ PTL+DVF+ T R R
Sbjct: 289 GQGHGVVDVSLRRPTLDDVFLHATNRAGR 317
>pir||F82303 ABC transporter, ATP-binding protein VC0589 [imported] - Vibrio
cholerae (group O1 strain N16961)
>gi|9655020|gb|AAF93756.1| (AE004144) ABC transporter,
ATP-binding protein [Vibrio cholerae]
Length = 305
Score = 182 bits (456), Expect = 6e-45
Identities = 114/326 (34%), Positives = 184/326 (55%), Gaps = 31/326 (9%)
Query: 1 MKAIEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKIL 60
M A+E++ LRK Y FEALKGI+ VKKG+ + LLGPNGAGK+TTI I+
Sbjct: 1 MYALEIEQLRKTYAGG----------FEALKGISLQVKKGDFYALLGPNGAGKSTTIGII 50
Query: 61 TTLLEPTSGEARVLGFDIVKEAREIRKRINLVAEGERTLYWRLTAYENLRYF----ASIY 116
++L+ TSG+ V G+D+ + ++++ LV + + +E + A Y
Sbjct: 51 SSLVNKTSGKVTVFGYDLDSQLELAKQKLGLVPQE-----FNFNPFETVEQIVLQQAGYY 105
Query: 117 YVPKKVAEERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLG 176
VPK +A+ER + L + LW+++ + N S GMK+RL IA+AL+++P++L LDEPT G
Sbjct: 106 GVPKALAKERAKKYLTQLDLWEKRSERARNLSGGMKRRLMIARALMHEPQLLILDEPTAG 165
Query: 177 LDVQSAIFVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRIIALDTPEGLKK 236
+D++ + E +K+ + + T++LTTHY+ EAE LC I II G +I T +K
Sbjct: 166 VDIELRRSMWEFLKQ-INAQGVTIILTTHYLEEAEMLCRHIGIIQRGELIENTT---MKS 221
Query: 237 LVRKDTIVEVRVKNYNGENPFGLAKIKEEGEKVVLRGPLD-----EEDIPKLVEFLVKNN 291
L+ K VE V + +G P +A ++ ++ ++ G L+ + I + L +
Sbjct: 222 LLGK-LHVETFVLDVDGNAP--IAPLQGVVKQQMVEGSLEIELEKSQGINHVFTQLTEQG 278
Query: 292 AKVLSVEVKEPTLEDVFIKLTGRGLR 317
KVLS+ K LE++F+ + G R
Sbjct: 279 VKVLSMRNKVNRLEELFVSIVNSGKR 304
>pir||S76626 ABC-type transport protein sll0489 - Synechocystis sp. (strain PCC
6803) >gi|1001733|dbj|BAA10570.1| (D64004) ABC
transporter [Synechocystis sp.]
Length = 342
Score = 180 bits (453), Expect = 1e-44
Identities = 109/322 (33%), Positives = 181/322 (55%), Gaps = 28/322 (8%)
Query: 4 IEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKILTTL 63
IEV++L K+Y A++ + F+V+KGE+ G LGPNGAGKTTT++IL
Sbjct: 2 IEVEHLSKVYGSTT-----------AIQNVDFSVQKGEILGFLGPNGAGKTTTMRILAGY 50
Query: 64 LEPTSGEARVLGFDIVKEAREIRKRINLVAEGERTLYWRLTAYENLRYFASIYYVPKKVA 123
+ T+G RV GFD+ +++ +RKRI + E LY +T L + ASI V
Sbjct: 51 IPATTGTVRVAGFDVHEQSLAVRKRIGYLPENP-PLYGDMTVASFLNFVASIKGVKPGDR 109
Query: 124 EERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQSAI 183
+R+ + L +++ L+ S+G KQR+ IA+A+++DP V+ LDEPT+GLD + I
Sbjct: 110 RQRVIWAMERCQLTEKRKVLIRKLSKGFKQRVGIAQAIVHDPAVIILDEPTVGLDPKQII 169
Query: 184 FVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRIIALDTPEGLKKLVRKDTI 243
VR LIK L E+ T++L+TH + E CDR+ II+ GR++A +TP+ L ++ +
Sbjct: 170 EVRNLIKSLAEDH--TIILSTHILPEVSMTCDRVTIINQGRVVATNTPDNLLAELKGNLS 227
Query: 244 VEVRVKNYNG-------ENPFGLAKI-------KEEGEKVVLRGPLDEEDIPKLVEFLVK 289
++ V G ++ G+ ++ ++E +++++R EE +L + +V
Sbjct: 228 YQLEVAGAEGMAIAHCLQSLPGVEEVQTKTHPQQQERQQILVRSNQLEELGQQLAQAIVT 287
Query: 290 NNAKVLSVEVKEPTLEDVFIKL 311
+ ++ PTLEDVF+ L
Sbjct: 288 QGWDLYEMQRLRPTLEDVFLNL 309
>sp|P54592|YHCH_BACSU HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PROTEIN 2 IN GLPD-CSPB
INTERGENIC REGION >gi|7445695|pir||D69822 ABC
transporter (ATP-binding protein) homolog yhcH -
Bacillus subtilis >gi|1239983|emb|CAA65691.1| (X96983)
hypothetical protein [Bacillus subtilis]
>gi|2633231|emb|CAB12736.1| (Z99108) similar to ABC
transporter (ATP-binding protein) [Bacillus subtilis]
Length = 305
Score = 180 bits (453), Expect = 1e-44
Identities = 103/285 (36%), Positives = 167/285 (58%), Gaps = 15/285 (5%)
Query: 33 ITFNVKKGELFGLLGPNGAGKTTTIKILTTLLEPTSGEARVLGFDIVKEAREIRKRINLV 92
++F +++GE+FG LGPNGAGKTTTI+++ L++ + G+ + G I KE + K I +
Sbjct: 23 LSFTIREGEVFGFLGPNGAGKTTTIRMMVGLMKLSKGDVLICGQSITKEYAKAIKHIGAI 82
Query: 93 AEGERTLYWRLTAYENLRYFASIYYVPKKVAEERIRNLLHMVGLWDRKDDLVMNYSRGMK 152
E LY L+ Y+NL+ FA + K V +E+I ++ +VGL DR D V YS GM+
Sbjct: 83 VENPE-LYKFLSGYKNLQQFARMV---KGVTKEKIDEVVELVGLTDRIHDKVKTYSLGMR 138
Query: 153 QRLAIAKALINDPEVLFLDEPTLGLDVQSAIFVRELIKKLVEEEKKTVLLTTHYMHEAEE 212
QRL +A+ L++DP+VL LDEPT GLD +R+ +KKL E V++++H + E E
Sbjct: 139 QRLGLAQCLLHDPKVLILDEPTNGLDPAGIREIRDHLKKLTRERGMAVIVSSHLLSEMEL 198
Query: 213 LCDRIAIIDHGRIIALDTPEGLKKLVRKDTIVEVRVKNYNGENPFGLAKIKEEGEKVV-- 270
+CDRIAI+ G++I + V+ + I E + E P A + + + +
Sbjct: 199 MCDRIAILQKGKLIDIQN-------VKDENIDENDTYFFQVEQPSEAATVLNQYDLLSKT 251
Query: 271 --LRGPLDEEDIPKLVEFLVKNNAKVLSVEVKEPTLEDVFIKLTG 313
+ L +E++P ++E LV ++ V+V +LED F+++TG
Sbjct: 252 NGVEIKLAKEEVPAVIELLVMQQIRIYEVKVITKSLEDRFLEMTG 296
>gb|AAC44357.1| (U43537) ATP-binding protein involved in mithramycin resistance
[Streptomyces argillaceus]
Length = 320
Score = 178 bits (446), Expect = 1e-43
Identities = 113/293 (38%), Positives = 163/293 (55%), Gaps = 8/293 (2%)
Query: 28 EALKGITFNVKKGELFGLLGPNGAGKTTTIKILTTLLEPTSGEARVLGFDIVKEAREIRK 87
EA+ G+ F V GE+ G LGPNGAGKTTT+++LTTLL P+SG A + G D++ E ++R
Sbjct: 19 EAVAGVDFTVHTGEIVGFLGPNGAGKTTTMRMLTTLLPPSSGTAVIAGRDLLHEPAKVRT 78
Query: 88 RINLVAEGERTLYWRLTAYENLRYFASIYYVPKKVAEERIRNLLHMVGLWDRKDDLVMNY 147
I V++ +L +Y + + AE R ++ +GL + D ++
Sbjct: 79 HIGYVSQAGGAKP-SSPVRRDLVLQGRLYGMSRSEAEARADEVITQLGLEELADRIIQTL 137
Query: 148 SRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQSAIFVRELIKKLVEEEKKTVLLTTHYM 207
S +R+ +A L++ PE+LFLDEPT LD +S V E I++L +E TV LTTHY+
Sbjct: 138 SGCQARRVDMALGLMHQPELLFLDEPTANLDPESRNDVWEHIRRLRDERGTTVFLTTHYL 197
Query: 208 HEAEELCDRIAIIDHGRIIALDTPEGLKKLVRKDTIVEVRVKNYNGENPFGLAKIKEEGE 267
EA+ LCDR+ IID GRIIA D+P LK + DTI E+ V + LA ++ E
Sbjct: 198 DEADSLCDRVLIIDKGRIIAEDSPRSLKAAISHDTI-EIEVADDTARATELLAAHRDVHE 256
Query: 268 KVVLRGPLD------EEDIPKLVEFLVKNNAKVLSVEVKEPTLEDVFIKLTGR 314
V L E + L+ L +V S+ V +PTL+DVF+ LT R
Sbjct: 257 VSVNGTVLSISCRDAERLLADLLRTLESARIRVESLRVLKPTLDDVFMTLTDR 309
>pir||C70529 probable ABC transporter - Mycobacterium tuberculosis (strain
H37RV) >gi|2181979|emb|CAB09479.1| (Z96072) hypothetical
protein Rv2688c [Mycobacterium tuberculosis]
Length = 301
Score = 177 bits (445), Expect = 1e-43
Identities = 124/315 (39%), Positives = 174/315 (54%), Gaps = 30/315 (9%)
Query: 2 KAIEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKILT 61
+ I V+ L YPK A++G+ F V +GE+FGLLGP+GAGK+TT K+L
Sbjct: 16 EVIRVRGLTFRYPKAAE---------PAVRGMEFTVGRGEIFGLLGPSGAGKSTTQKLLI 66
Query: 62 TLLEPTSGEARVLGFDIVKEAREIRKRINLVAEGERTLYWRLTAYENLRYFASIYYVPKK 121
LL G+A V + + + +RI + E Y +LT YENLR+FAS+Y
Sbjct: 67 GLLRDHGGQATVWDKEPAEWGPDYYERIGVSFELPNH-YQKLTGYENLRFFASLY----A 121
Query: 122 VAEERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQS 181
A LL VGL D LV YS+GM+ RL A++LINDPE+LFLDEPT GLD +
Sbjct: 122 GATADPMQLLAAVGLADDAHTLVGKYSKGMQMRLPFARSLINDPELLFLDEPTSGLDPVN 181
Query: 182 AIFVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRIIALDTPEGLKKLVRKD 241
A ++++I L + +T+ LTTH M A+ELCDR+A + GRI+ALD+P L K+ R
Sbjct: 182 ARKIKDIIVDL-KARGRTIFLTTHDMATADELCDRVAFVVDGRIVALDSPTEL-KIARSR 239
Query: 242 TIVEVRVKNYNGENPFGLAKIKEEGEKVVLRGPLDEEDIPKLVEFLVKNNAKVLSVEVKE 301
V V + G GL E + + G D+ V N V ++ +E
Sbjct: 240 RRVRVEYRGDGG----GL-----ETAEFGMDGLADDPAFHS-----VLRNHHVETIHSRE 285
Query: 302 PTLEDVFIKLTGRGL 316
+L+DVF+++TGR L
Sbjct: 286 ASLDDVFVEVTGRQL 300
>sp|P46903|NATA_BACSU ATP-BINDING TRANSPORT PROTEIN NATA (NA+ ABC TRANSPORTER)
>gi|7445612|pir||A69666 Na+ ABC transporter (extrusion)
(ATP-binding protein) natA - Bacillus subtilis
>gi|973330|gb|AAB53022.1| (U30873) NatA [Bacillus
subtilis] >gi|2415726|dbj|BAA22236.1| (AB000617) NatA
[Bacillus subtilis] >gi|2632561|emb|CAB12069.1| (Z99105)
Na+ ABC transporter (ATP-binding protein) [Bacillus
subtilis]
Length = 246
Score = 177 bits (444), Expect = 2e-43
Identities = 87/216 (40%), Positives = 143/216 (65%), Gaps = 1/216 (0%)
Query: 28 EALKGITFNVKKGELFGLLGPNGAGKTTTIKILTTLLEPTSGEARVLGFDIVKEAREIRK 87
+A++ ++ ++KGE+ G+LG NGAGKTT ++++ +LLEP+ G V GFD VK+ E+++
Sbjct: 19 KAVRDVSLTIEKGEVVGILGENGAGKTTMLRMIASLLEPSQGVITVDGFDTVKQPAEVKQ 78
Query: 88 RINLVAEGERTLYWRLTAYENLRYFASIYYVPKKVAEERIRNLLHMVGLWDRKDDLVMNY 147
RI ++ GE LY R+TA ENL+YF +Y + + + RI +L G+ D + V +
Sbjct: 79 RIGVLFGGETGLYDRMTAKENLQYFGRLYGLNRHEIKARIEDLSKRFGMRDYMNRRVGGF 138
Query: 148 SRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQSAIFVRELIKKLVEEEKKTVLLTTHYM 207
S+GM+Q++AIA+ALI+DP+++ DEPT GLD+ S+ RE I++L + E+KT+L ++H M
Sbjct: 139 SKGMRQKVAIARALIHDPDIILFDEPTTGLDITSSNIFREFIQQL-KREQKTILFSSHIM 197
Query: 208 HEAEELCDRIAIIDHGRIIALDTPEGLKKLVRKDTI 243
E + LCD + +I G +I E L + R + +
Sbjct: 198 EEVQALCDSVIMIHSGEVIYRGALESLYESERSEDL 233
>pir||E69771 ABC transporter (ATP-binding protein) homolog ydbJ - Bacillus
subtilis >gi|1881259|dbj|BAA19286.1| (AB001488) PROBABLE
TRANSPORT ATP BINDING PROTEIN. [Bacillus subtilis]
>gi|2632749|emb|CAB12256.1| (Z99106) similar to ABC
transporter (ATP-binding protein) [Bacillus subtilis]
Length = 308
Score = 175 bits (440), Expect = 5e-43
Identities = 110/291 (37%), Positives = 165/291 (55%), Gaps = 6/291 (2%)
Query: 22 RKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKILTTLLEPTSGEARVLGFDIVKE 81
+KI + LK I+ +V +GE+ GLLGPNG+GKTT I+I+ LL+ SG + GF E
Sbjct: 13 KKIGSKQILKQISMDVMEGEIIGLLGPNGSGKTTLIRIIVGLLKQNSGSVTISGFQHDTE 72
Query: 82 AREIRKRINLVAEGERTLYWRLTAYENLRYFASIYYVPKKVAEERIRNLLHMVGLWDRKD 141
+ + + + E Y LT +ENL++FA+++ KK+A+ER+ ++ VGL
Sbjct: 73 FEKAMEAVGAIVENPE-FYPYLTGWENLKHFANMH---KKIADERLDEVVERVGLTSAIH 128
Query: 142 DLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQSAIFVRELIKKLVEEEKKTVL 201
D V YS GM+QRL IA+A+++ P++L LDEPT GLD R+ IK+L E E VL
Sbjct: 129 DKVKTYSLGMRQRLGIAQAILHRPKLLILDEPTNGLDPAGMKDFRDHIKELAEMEGTAVL 188
Query: 202 LTTHYMHEAEELCDRIAIIDHGRIIALDTPEGLKKLVRKDTIVEVRVKNYNGENPFGLAK 261
TH + E E+LCDR+ II G I A + +G + K I+EV+ + N +
Sbjct: 189 FATHLLREVEDLCDRVIIIQKGEIKAEVSLQGTDQTTEK-AIIEVQPQE-KALNWLTGNQ 246
Query: 262 IKEEGEKVVLRGPLDEEDIPKLVEFLVKNNAKVLSVEVKEPTLEDVFIKLT 312
+ E + + + +E+IP+L LV + V S+ +LED FIK T
Sbjct: 247 YQAESQDGTIVVEVAKENIPELNRSLVGQDLNVFSITPYTQSLEDEFIKAT 297
>pir||T36344 probable ABC-type transport system ATP-binding protein -
Streptomyces coelicolor >gi|4808357|emb|CAB42771.1|
(AL049841) putative ABC transporter ATP-binding
component [Streptomyces coelicolor A3(2)]
Length = 315
Score = 175 bits (438), Expect = 8e-43
Identities = 116/317 (36%), Positives = 173/317 (53%), Gaps = 18/317 (5%)
Query: 3 AIEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKILTT 62
AI V+ RK Y K AL G+ V +G + G+LGPNGAGKTT ++IL+T
Sbjct: 7 AITVEGARKEYGSK-----------SALDGLDLTVTRGTVHGVLGPNGAGKTTLVRILST 55
Query: 63 LLEPTSGEARVLGFDIVKEAREIRKRINLVAEGERTLYWRLTAYENLRYFASIYYVPKKV 122
LL P +G V G D+V EA +R RI L+ + L L +NL F ++++ +
Sbjct: 56 LLRPDAGRVEVAGHDVVAEAYAVRLRIGLLGQ-HAALDEELGGRQNLEMFGRLHHLGARG 114
Query: 123 AEERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQSA 182
A R LL GL D V YS GM++RL +A +LI +PEVLFLDEPT GLD +
Sbjct: 115 ARARADELLVRFGLSDTGRKPVGAYSGGMRRRLDLAASLITEPEVLFLDEPTTGLDPRGR 174
Query: 183 IFVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRIIALDTPEGLKKLVRKDT 242
V + ++ LV TVLLTT Y+ EA++L DRI+++D GR++A T + LK D
Sbjct: 175 AEVWDSVRSLV-GAGTTVLLTTQYLEEADQLADRISVVDAGRVVADGTADELKAATGGDR 233
Query: 243 I-VEVRVKNYNGENP--FGLAKIKEEGEKVVLRGPLDEE--DIPKLVEFLVKNNAKVLSV 297
+ V +R + G L ++ + ++ +L P+ + + +V L + + V
Sbjct: 234 VDVVLRDAGHLGAAVALLPLTGVRVDPDRRLLSAPVTDRMAALSGVVRALEEAGIEAEDV 293
Query: 298 EVKEPTLEDVFIKLTGR 314
++ PTL++VF+ LT R
Sbjct: 294 ALRRPTLDEVFLHLTDR 310
>pir||A70194 ABC transporter, ATP-binding protein homolog - Lyme disease
spirochete >gi|2688689|gb|AAC67099.1| (AE001175) ABC
transporter, ATP-binding protein [Borrelia burgdorferi]
Length = 309
Score = 174 bits (437), Expect = 1e-42
Identities = 110/299 (36%), Positives = 178/299 (58%), Gaps = 21/299 (7%)
Query: 27 FEALKGITFNVKKGELFGLLGPNGAGKTTTIKILTTLLEPTSGEARVLGFDIVKEAREIR 86
F AL ++F V++GE+ G+LGPNGAGK+T IKILT+ P+ G ++ G DIV+ ++EI
Sbjct: 14 FTALFNVSFKVEEGEVLGILGPNGAGKSTLIKILTSFHYPSKGNVKIFGKDIVEHSKEIL 73
Query: 87 KRINLVAEGERTLYWRLTAYENLRYFASIYYVPKKVAEERIRNLLHMVGLWDRKDDLVMN 146
++I V E + LY L+ E L++ + I V K ++ I ++ + L + +D L+
Sbjct: 74 QQIGYVPE-KLALYPELSVKEYLKFISEIKGVKK--LKKEIDRVISIFKLKEVEDKLISQ 130
Query: 147 YSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQSAIFVRELIKKLVEEEKKTVLLTTHY 206
S+G +QR+ IA ALIN+P+++ LDEPT GLD I +E +++L +E T+L ++H
Sbjct: 131 LSKGFRQRVGIAGALINNPKLVILDEPTNGLDPNQIIEFKEFLRELAKE--STILFSSHI 188
Query: 207 MHEAEELCDRIAIIDHGRIIALDTPEGLKKLVRKDTIVEVRV--------KNYNGENP-F 257
+ E E +C RI I+++G I+A DT E + K K+ +E+ V K +N +N F
Sbjct: 189 LSEVESICKRIIIVNNGVIVADDTKENIIKNKLKEIEIELIVSKKSENEKKIFNSKNDIF 248
Query: 258 GLAKIKEEGEKVVLRGPLD----EEDIPKLVEFLVKNNAKVLSVEVKEPTLEDVFIKLT 312
L K++E + + + L EED L ++VKNN + ++ K +LE +F KLT
Sbjct: 249 SLIKLEEHEKDLNISLKLSQGKTEED---LFSYIVKNNIILKAMIPKHESLEKIFSKLT 304
>pir||E72384 ABC transporter, ATP-binding protein - Thermotoga maritima (strain
MSB8) >gi|4980892|gb|AAD35474.1|AE001718_11 (AE001718)
ABC transporter, ATP-binding protein [Thermotoga
maritima]
Length = 301
Score = 174 bits (437), Expect = 1e-42
Identities = 119/301 (39%), Positives = 168/301 (55%), Gaps = 37/301 (12%)
Query: 28 EALKGITFNVKKGELFGLLGPNGAGKTTTIKILTTLLEPTSGEARVLGFDIVKEAREIRK 87
+A+ GI+F V++G +F LGPNGAGKTTT++IL L + SGE G RE ++
Sbjct: 28 KAVDGISFTVERGTVFSFLGPNGAGKTTTVEILEGLRKKDSGEIYYFGERKDVLDRETKR 87
Query: 88 RINLVAEGERTLYWRLTAYENLRYFASIYYVPKKVAEERIRNLLHMVGLWDRKDDLVMNY 147
+I + + + + LT +E L+ F +Y + E ++ + L + + +V
Sbjct: 88 KIGVCLQ-KSAFFENLTVWETLKLFRGLYGTGLDLKE-----VMGLFSLENIEKKMVKTL 141
Query: 148 SRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQSAIFVRELIKKLVEEEK---KTVLLTT 204
S G QRLA+A A INDPE++FLDEPT GLD Q+ R I +E K KT+ LTT
Sbjct: 142 SGGQLQRLAVAVAFINDPEIVFLDEPTTGLDPQA----RRQIWDTIEHFKNLGKTIFLTT 197
Query: 205 HYMHEAEELCDRIAIIDHGRIIALDTP------EGLKKLVRKDTIVEVRVKNYNGENPFG 258
HYM EAE L D + IIDHG+IIA TP GLK +V D +V V+
Sbjct: 198 HYMEEAERLSDHVCIIDHGKIIAEGTPSSLISSSGLKTVVEFDCDQDVNVRYLE------ 251
Query: 259 LAKIKEEGEKVVLRGPLDEEDIP-KLVEFLVKNNAKVLSVEVKEPTLEDVFIKLTGRGLR 317
K+E VV E D P +L++ L+K N V ++ +++P LEDVF+KLTGR LR
Sbjct: 252 ----KKENHYVV------ETDAPEELIKDLLK-NWNVSNIVIRKPNLEDVFLKLTGRDLR 300
Query: 318 D 318
+
Sbjct: 301 E 301
>pir||T36505 probable ABC-type transport system ATP-binding component -
Streptomyces coelicolor >gi|5457259|emb|CAB46947.1|
(AL096822) putative ABC-transporter ATP-binding
component [Streptomyces coelicolor A3(2)]
Length = 342
Score = 174 bits (437), Expect = 1e-42
Identities = 115/300 (38%), Positives = 170/300 (56%), Gaps = 19/300 (6%)
Query: 29 ALKGITFNVKKGELFGLLGPNGAGKTTTIKILTTLLEPTSGEARVLGFDIVKEAREIRKR 88
A+ G+ V G ++G+LGPNGAGKTTT+K+L TLL P G ARV G D+V EA E+R R
Sbjct: 24 AVDGVDLAVPAGTVYGVLGPNGAGKTTTVKMLATLLRPDGGHARVFGHDVVHEADEVRGR 83
Query: 89 INLVAEGERTLYWRLTAYENLRYFASIYYVPKKVAEERIRNLLHMVGLWDRKDDLVMNYS 148
++L + ++ LT ENL + K A ER LL GL D V +YS
Sbjct: 84 VSLTGQ-YASVDEDLTGTENLVLLGRLLGHGKAAARERGDQLLAAFGLTDAAAKQVKHYS 142
Query: 149 RGMKQRLAIAKALINDPEVLFLDEPTLGLDVQSAIFVRELIKKLVEEEKKTVLLTTHYMH 208
GM++R+ IA +++N P++LFLDEPT GLD +S V ++++ +V + TVLLTT Y+
Sbjct: 143 GGMRRRIDIAASILNTPDLLFLDEPTTGLDPRSRNQVWDIVRAVV-AQGTTVLLTTQYLD 201
Query: 209 EAEELCDRIAIIDHGRIIALDTPEGLKKLVRKDTIVEVRVKNYNGENPFG--------LA 260
EA++L RIA+ID GR+IA T LK V + V +R+++ E P +A
Sbjct: 202 EADQLASRIAVIDKGRVIAEGTKGELKASVGAGS-VHLRLRDAE-ERPEAERVLRNLLVA 259
Query: 261 KIKEEGEKVVLRGPLD-------EEDIPKLVEFLVKNNAKVLSVEVKEPTLEDVFIKLTG 313
+++ E + V L L + K + L + V S + +P+L++VF+ LTG
Sbjct: 260 EVQPEPDPVALTARLGAAASDTAADQAAKALGELARAGITVDSFSLGQPSLDEVFLALTG 319
>pir||C72303 ABC transporter, ATP-binding protein - Thermotoga maritima (strain
MSB8) >gi|4981569|gb|AAD36105.1|AE001764_8 (AE001764)
ABC transporter, ATP-binding protein [Thermotoga
maritima]
Length = 293
Score = 174 bits (436), Expect = 1e-42
Identities = 117/317 (36%), Positives = 181/317 (56%), Gaps = 28/317 (8%)
Query: 1 MKAIEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKIL 60
M +EV++L K Y K ++G+TF+V++GE+FG +GPNGAGKTTTI++L
Sbjct: 1 MSVVEVRDLTKYYGKS-----------RGVEGVTFSVEEGEIFGFIGPNGAGKTTTIRLL 49
Query: 61 TTLLEPTSGEARVLGFDIVKEAREIRKRINLVAEGERTLYWRLTAYENLRYFASIYYVPK 120
L+ P SG A + G D++KE +EIRK + + GE + Y +T E LRY AS Y +
Sbjct: 50 LGLIFPDSGLAEIFGKDVLKEGKEIRKNVGYI-PGEVSFYPEVTVEEFLRYSASFY---E 105
Query: 121 KVAEERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLD-- 178
KV + ++ L + L +K + S G K+++AI +AL++ P++L LDEPT GLD
Sbjct: 106 KVDWDYVKELCGVFSLDTKK--RIKELSMGNKKKVAIVQALMHRPKLLILDEPTNGLDPI 163
Query: 179 VQSAIFVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRIIALDTPEGLKKLV 238
VQ+ F E++K +E+ TV ++H + E E LCDR+A+I GRII ++ E LK
Sbjct: 164 VQNTFF--EILKN-EKEKGTTVFFSSHILSEVERLCDRVAMIKDGRIIRVEKVENLK--- 217
Query: 239 RKDTIVEVRVKNYNGENPFGLAKIKEEGEKVVLRGPLDEEDIPKLVEFLVKNNAKVLSVE 298
+ VRVK N E LA++ + L ++ +L+E L + K+
Sbjct: 218 -GERYKVVRVKGENLEKLKDLAEVNRLKFENGTAEFLFSGNVERLLEIL--RSLKLSDFW 274
Query: 299 VKEPTLEDVFIKLTGRG 315
V+EP+LE++F+ G
Sbjct: 275 VEEPSLEEIFMSYYREG 291
>sp|P32010|DRRA_STRPE DAUNORUBICIN RESISTANCE ATP-BINDING PROTEIN DRRA
>gi|625935|pir||S27707 daunorubicin resistance protein -
Streptomyces peucetius >gi|153230|gb|AAA74717.1|
(M73758) daunorubicin resistance protein [Streptomyces
peucetius]
Length = 330
Score = 173 bits (435), Expect = 2e-42
Identities = 115/328 (35%), Positives = 180/328 (54%), Gaps = 28/328 (8%)
Query: 2 KAIEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKILT 61
+AIE L K+Y A+ G+ NV G ++G+LGPNGAGK+TTI++L
Sbjct: 7 RAIETSGLVKVY-----------NGTRAVDGLDLNVPAGLVYGILGPNGAGKSTTIRMLA 55
Query: 62 TLLEPTSGEARVLGFDIVKEAREIRKRINLVAEGERTLYWRLTAYENLRYFASIYYVPKK 121
TLL P G ARV G D+ E +R+RI++ + ++ LT ENL +
Sbjct: 56 TLLRPDGGTARVFGHDVTSEPDTVRRRISVTGQ-YASVDEGLTGTENLVMMGRLQGYSWA 114
Query: 122 VAEERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQS 181
A ER L+ GL D +D L+ YS GM++RL IA +++ P++LFLDEPT GLD +S
Sbjct: 115 RARERAAELIDGFGLGDARDRLLKTYSGGMRRRLDIAASIVVTPDLLFLDEPTTGLDPRS 174
Query: 182 AIFVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRIIALDTPEGLKKLVRKD 241
V ++++ LV + TVLLTT Y+ EA++L DRIA+IDHGR+IA T LK + +
Sbjct: 175 RNQVWDIVRALV-DAGTTVLLTTQYLDEADQLADRIAVIDHGRVIAEGTTGELKSSLGSN 233
Query: 242 TIVEVRVKNYNGENPFGLAK---------IKEEGEKVVLRGPLDE--EDIPKLVEFLVKN 290
+ R++ ++ ++ + I + + L +D+ + + L E L +
Sbjct: 234 VL---RLRLHDAQSRAEAERLLSAELGVTIHRDSDPTALSARIDDPRQGMRALAE-LSRT 289
Query: 291 NAKVLSVEVKEPTLEDVFIKLTGRGLRD 318
+ +V S + + +L++VF+ LTG D
Sbjct: 290 HLEVRSFSLGQSSLDEVFLALTGHPADD 317
>emb|CAA75761.1| (Y15759) ORF1 [Streptomyces rochei]
Length = 363
Score = 173 bits (433), Expect = 3e-42
Identities = 111/301 (36%), Positives = 169/301 (55%), Gaps = 18/301 (5%)
Query: 29 ALKGITFNVKKGELFGLLGPNGAGKTTTIKILTTLLEPTSGEARVLGFDIVKEAREIRKR 88
A+ G+ V G ++GLLGPNGAGKTTT+K+L TLL P GEARV G D++ +A +R R
Sbjct: 21 AVDGVDLRVPAGTVYGLLGPNGAGKTTTVKVLATLLRPDGGEARVFGRDVLADADAVRGR 80
Query: 89 INLVAEGERTLYWRLTAYENLRYFASIYYVPKKVAEERIRNLLHMVGLWDRKDDLVMNYS 148
++L + ++ LT ENL A + K A ER LL GL + V +YS
Sbjct: 81 VSLTGQ-YASVDEDLTGTENLLLLARLLGHSKPAARERAAQLLDAFGLSEAAGRQVKSYS 139
Query: 149 RGMKQRLAIAKALINDPEVLFLDEPTLGLDVQSAIFVRELIKKLVEEEKKTVLLTTHYMH 208
GM++R+ IA +++N P++LFLDEPT GLD +S V ++++ +V + TVLLTT Y+
Sbjct: 140 GGMRRRIDIAASILNTPDLLFLDEPTTGLDPRSRNQVWDIVRAVV-AQGTTVLLTTQYLD 198
Query: 209 EAEELCDRIAIIDHGRIIALDTPEGLKKLVRKDTIVEVRVKNY----NGENPFGL---AK 261
EA++L RIA+IDHGR+IA T LK V V +R++ E L A
Sbjct: 199 EADQLASRIAVIDHGRVIAEGTKGELKASVGSGA-VHLRLREAEQRPEAERILALALNAT 257
Query: 262 IKEEGEKVVLRGPLD--------EEDIPKLVEFLVKNNAKVLSVEVKEPTLEDVFIKLTG 313
++ + + V L ++ E + + L + V + + +P+L++VF+ LT
Sbjct: 258 VQLDADPVALTARVNGHGTELGAAEQAARALSELARAGITVDNFALGQPSLDEVFLALTD 317
Query: 314 R 314
+
Sbjct: 318 K 318
>emb|CAB88835.1| (AL353832) putative ABC-transport protein, ATP-binding component.
[Streptomyces coelicolor A3(2)]
Length = 354
Score = 171 bits (429), Expect = 1e-41
Identities = 107/312 (34%), Positives = 165/312 (52%), Gaps = 6/312 (1%)
Query: 4 IEVKNLRKLYPKKIPLPFRKIE--WFEALKGITFNVKKGELFGLLGPNGAGKTTTIKILT 61
IE+ + K++ + F K E A+ G++F V +GE+ G +GPNGAGK+TTIK+LT
Sbjct: 38 IELDGVEKVFDVRRKTGFLKRERRQVRAVDGLSFTVSRGEMVGYIGPNGAGKSTTIKMLT 97
Query: 62 TLLEPTSGEARVLGFDIVKEAREIRKRINLVAEGERTLYWRLTAYENLRYFASIYYVPKK 121
+L P+ G RV G D +E + RI +V TL+W L ++ R +Y +P
Sbjct: 98 GILTPSGGRLRVAGIDPSRERIRLAHRIGVVFGQRTTLWWDLPLIDSYRLMHRMYRIPDA 157
Query: 122 VAEERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQS 181
E + + ++ L + D V S G + R IA AL++DPEVL+LDEPT+GLDV S
Sbjct: 158 RYRENLDRCVELLQLQELLDVPVRQLSLGQRMRGDIAAALLHDPEVLYLDEPTIGLDVVS 217
Query: 182 AIFVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRIIALDTPEGLKKL--VR 239
VR + L E TVLLTTH + + E+LC R+ +IDHGR++ EGL +
Sbjct: 218 KAKVRGFLLDLNAERGTTVLLTTHDLQDIEQLCSRVMVIDHGRLMYDGRLEGLHEAGESE 277
Query: 240 KDTIVEVRVKNYNGENPFGLAKIKEEGEKVVLRGPLDEEDIPKLVEFLVKNNAKVLSVEV 299
+ +V++ + E P ++ EG + L P E + + ++ + V
Sbjct: 278 RTLVVDLERELPPIEAPEPARVVRVEGPRQWLAFPASESAAGLVAGIAAR--YPLVDLSV 335
Query: 300 KEPTLEDVFIKL 311
+EP +E V K+
Sbjct: 336 REPDIESVIAKM 347
>emb|CAC11370.1| (AL445063) gliding motility protein related [Thermoplasma
acidophilum]
Length = 305
Score = 171 bits (429), Expect = 1e-41
Identities = 110/318 (34%), Positives = 181/318 (56%), Gaps = 26/318 (8%)
Query: 2 KAIEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKILT 61
K IEV++LR+ Y + + + ++F V KGE++GLLG NGAGKTTTI+ +T
Sbjct: 4 KVIEVEHLRQTYDGRTFV----------VDDVSFYVLKGEIYGLLGKNGAGKTTTIRTMT 53
Query: 62 TLLEPTSGEARVLGFDIVKEAREIRKRINLVAEGERTLYWRLTAYENLRYFASIYYVPKK 121
T+L G+ R+LG D+ + A +IR+RI +V + E + + NL+ + ++ VP++
Sbjct: 54 TILPVHYGKVRILGMDVSENAEKIRRRIGVVLQNESFDF--ASVERNLKVYGMLWDVPRE 111
Query: 122 VAEERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQS 181
V + RI +L + L + M S G K+RL +A+ ++D ++LFLDEPT+GLD
Sbjct: 112 VLKARIEEVLEVFDLGQLRKVRAMELSGGQKKRLQVAREFLHDMDLLFLDEPTVGLD--- 168
Query: 182 AIFVRELIKKLVEEEKK--TVLLTTHYMHEAEELCDRIAIIDHGRIIALDTPEGLKKLVR 239
I R ++ + ++ +K TVL TT M EA+ LCDRIAI++ G+I+A T LK
Sbjct: 169 PIMRRSVLNYIRDKARKGLTVLYTTQIMEEADYLCDRIAIMNRGKIVAEGTSSDLKSKYG 228
Query: 240 KDTIVEVRVKNYNGENPFG--LAKIKE----EGEKVVLRGPLDEEDIPKLVEFLVKNNAK 293
+ V V +GE + AK E + E++ + E+ +P L+ +L +
Sbjct: 229 DLKTIHVVV---SGEIDYEDLRAKFPEDVLFDNEEIRIVSKNVEDILPDLIIYLKTKGIR 285
Query: 294 VLSVEVKEPTLEDVFIKL 311
+ + V+E +L+DVF+K+
Sbjct: 286 IERISVEESSLDDVFLKV 303
>gb|AAF99566.1| (AF167161) unknown [Staphylococcus aureus]
Length = 309
Score = 171 bits (429), Expect = 1e-41
Identities = 119/317 (37%), Positives = 168/317 (52%), Gaps = 23/317 (7%)
Query: 4 IEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKILTTL 63
IE+ NL K Y +I A+ ++ V+ G+++G LG NGAGKTTTI++L L
Sbjct: 8 IEINNLTKQYGSQI-----------AVNNLSITVESGQIYGFLGRNGAGKTTTIRMLLGL 56
Query: 64 LEPTSGEARVLGFDIVKEAREIRKRINLVAEGERTLYWRLTAYENLRYFASIYYVPKKVA 123
++PT G ++ + EI K I + E Y LTA ENL A I + K
Sbjct: 57 IKPTKGNIKIFEKEFESNKTEILKNIGAMVETPG-FYSNLTAKENLTINAKILGIQK--- 112
Query: 124 EERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQSAI 183
E I +L +VGL K L NYS GMKQRL IA+AL+++PE+L LDEPT GLD
Sbjct: 113 ENAIEEVLEIVGLASEKVKLFKNYSLGMKQRLGIARALLHNPELLILDEPTNGLDPIGIK 172
Query: 184 FVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRIIALDTPEGLKKLVRKDTI 243
+R+LIK L + T+L+++H + E E+L D++ II +G ++ E LKK R+
Sbjct: 173 EIRKLIKDLAQSRNITILISSHILSEIEQLVDKVGIIHNGVLLEEIMYEDLKKKNRQFIS 232
Query: 244 VEVRVKNYNG---ENPFGL--AKIKEEGEKVVLRGPLDEEDIPKLVEFLVKNNAKVLSVE 298
+ V + E FG+ KIKE GE + +++I +L LV NN V +
Sbjct: 233 ISVSDEEKVACLLETNFGIYDYKIKENGEFKIYSHIDRQQEINRL---LVLNNIDVFQMR 289
Query: 299 VKEPTLEDVFIKLTGRG 315
V E LE F L G G
Sbjct: 290 VIEDYLETYFEDLVGGG 306
>pir||T36741 probable ABC-type transport system ATP-binding protein -
Streptomyces coelicolor >gi|5531429|emb|CAB50934.1|
(AL096849) putative ABC-transporter ATP-binding protein
[Streptomyces coelicolor A3(2)]
Length = 332
Score = 169 bits (425), Expect = 3e-41
Identities = 111/296 (37%), Positives = 161/296 (53%), Gaps = 19/296 (6%)
Query: 29 ALKGITFNVKKGELFGLLGPNGAGKTTTIKILTTLLEPTSGEARVLGFDIVKEAREIRKR 88
AL+G+ V +G + GLLGPNGAGKTT +++LTTLL P +G ARV G D+V+EA +R+
Sbjct: 21 ALRGLDLAVPEGTVCGLLGPNGAGKTTAVRLLTTLLRPDAGSARVAGHDLVREAAAVRRL 80
Query: 89 INLVAEGERTLYWRLTAYENLRYFASIYYVPKKVAEERIRNLLHMVGLWDRKDDLVMNYS 148
I + + ++ LT +NLR FA ++ V + A R LL GL + D + S
Sbjct: 81 IGVTGQ-YASVDGDLTGRQNLRLFARLHRV--RDAAARADELLDRFGLAEAADRPAVTLS 137
Query: 149 RGMKQRLAIAKALINDPEVLFLDEPTLGLDVQSAIFVRELIKKLVEEEKKTVLLTTHYMH 208
G+++RL +A +L+ PEVLFLDEPT GLD V E ++ L + + TVLLTT Y+
Sbjct: 138 GGLRRRLDLAASLVRRPEVLFLDEPTTGLDPAGRNRVWETVRAL-KADGTTVLLTTQYLE 196
Query: 209 EAEELCDRIAIIDHGRIIALDTPEGLKKLVRK---------DTIVEVR--VKNYNGENPF 257
EA+ L D IA++D GR+ +P LK LV D +V + G P
Sbjct: 197 EADRLADDIALVDRGRVAHTGSPAELKALVGTYAQAVVADADALVRAAGVLDRLTGAEPV 256
Query: 258 GLAKIKEEGEKVVLRGPLDEEDIPKLVEFLVKNNAKVLSVEVKEPTLEDVFIKLTG 313
+ E V + +P+LV L + ++ PTL+DVF++LTG
Sbjct: 257 ----LDHERRTVGVVSTDPTLTLPRLVRELDAAGVPLADASLRPPTLDDVFLRLTG 308
>pir||B83294 probable ATP-binding component of ABC transporter PA2812 [imported]
- Pseudomonas aeruginosa (strain PAO1)
>gi|9948896|gb|AAG06200.1|AE004708_6 (AE004708) probable
ATP-binding component of ABC transporter [Pseudomonas
aeruginosa]
Length = 310
Score = 168 bits (422), Expect = 6e-41
Identities = 103/294 (35%), Positives = 165/294 (56%), Gaps = 10/294 (3%)
Query: 27 FEALKGITFNVKKGELFGLLGPNGAGKTTTIKILTTLLEPTSGEARVLGFDIVKEAREIR 86
F+ALKGI +V +G+ F LLGPNGAGK+TTI IL+TL+ TSG V G D+ K+ ++
Sbjct: 18 FQALKGIDLDVAEGDFFALLGPNGAGKSTTIGILSTLVNKTSGSVSVFGHDLDKDPAGLK 77
Query: 87 KRINLVAEGERTLYWRLTAYENLRYFASIYYVPKKVAEERIRNLLHMVGLWDRKDDLVMN 146
+ + +V + E ++ + A Y +P K+A+ER L +GLWD++++
Sbjct: 78 RCLGVVPQ-EFNFNQFEKVFDIVVTQAGYYGIPAKIAKERAERYLTQLGLWDKRNEASRM 136
Query: 147 YSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQSAIFVRELIKKLVEEEKKTVLLTTHY 206
S GMK+RL IA+AL++ P +L LDEPT G+D++ + + +L +E +++LTTHY
Sbjct: 137 LSGGMKRRLMIARALVHQPRLLILDEPTAGVDIELRRSMWSFLTEL-NQEGISIILTTHY 195
Query: 207 MHEAEELCDRIAIIDHGRIIALDTPEGLKKLVRKDTIVEVRVKNYNGENP----FGLAKI 262
+ EAE+LC IAIIDHG I+ + L + +T + + +KN P + +
Sbjct: 196 LEEAEQLCRNIAIIDHGEIVQNTSMRDLLMTLHSETFL-LDLKNVQALPPTLDGYPTRLV 254
Query: 263 KEEGEKVVLRGPLDEEDIPKLVEFLVKNNAKVLSVEVKEPTLEDVFIKLTGRGL 316
+ +V + + I L L +VLS+ K LE++F+ L + L
Sbjct: 255 DDHTLEVQVE---KSQGINDLFAQLGAQGIEVLSLRNKTNRLEELFVSLVEKNL 305
>pir||T44443 gliding motility protein [imported] - Flavobacterium johnsoniae
>gi|2281663|gb|AAC19751.1| (AF007381) gliding motility
protein [Flavobacterium johnsoniae]
Length = 298
Score = 168 bits (421), Expect = 8e-41
Identities = 110/316 (34%), Positives = 171/316 (53%), Gaps = 26/316 (8%)
Query: 3 AIEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKILTT 62
+IEV ++ K Y ++ +AL I+F ++KGE+ G LGPNGAGK+T +KILTT
Sbjct: 2 SIEVNSISKSYGEQ-----------KALNEISFKIEKGEIVGFLGPNGAGKSTLMKILTT 50
Query: 63 LLEPTSGEARVLGFDIVKEAREIRKRINLVAEGERTLYWRLTAYENLRYFASIYYVPKKV 122
L SG A V G D++ A+ +++ I + E LY L E L + A +Y VPK
Sbjct: 51 YLLADSGSALVNGHDVMTNAKAVQQSIGYLPE-HNPLYLDLYVREYLAFNADVYKVPK-- 107
Query: 123 AEERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQSA 182
RI ++ + GL + S+G +QR+ +A AL+++P+VL LDEPT GLD
Sbjct: 108 --SRIEEVIQLTGLTPESHKKISQLSKGYRQRVGLANALLHNPDVLILDEPTTGLDPNQL 165
Query: 183 IFVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRIIALDTPEGLKKLVRKDT 242
+ +R +IK + ++ KT+ L+TH M E E +CDR+ IID G+I+A + + L K+
Sbjct: 166 MEIRNVIKNIGKD--KTIFLSTHIMQEVEAICDRVIIIDKGQIVADNKLDHL-VAADKEQ 222
Query: 243 IVEVRVKNYNGENPF-----GLAKIKEEGEKV-VLRGPLDEEDIPKLVEFLVKNNAKVLS 296
++EV +Y E +A K + L D++ P + +F +N K L
Sbjct: 223 VIEVEF-DYQIEEQLLAKLENIASYKNTHDMTWELTFITDKDMRPAIFDFANENGLKTLQ 281
Query: 297 VEVKEPTLEDVFIKLT 312
+ K LE VF ++T
Sbjct: 282 LNQKNKNLEAVFREIT 297
>pir||B75459 sodium extrusion protein NatA - Deinococcus radiodurans (strain
R1) >gi|6458650|gb|AAF10504.1|AE001945_8 (AE001945)
sodium extrusion protein NatA [Deinococcus radiodurans]
Length = 244
Score = 168 bits (420), Expect = 1e-40
Identities = 95/207 (45%), Positives = 128/207 (60%), Gaps = 8/207 (3%)
Query: 27 FEALKGITFNVKKGELFGLLGPNGAGKTTTIKILTTLLEPTSGEARVLGFDIVKEAREIR 86
F+AL+ +TF+ + GE+FGLLGPNGAGKTT ++IL TLL PTSG V G D ++A +R
Sbjct: 14 FQALRDVTFSARDGEVFGLLGPNGAGKTTLLRILATLLSPTSGSVTVAGLDTQRDAEAVR 73
Query: 87 KRINLVAEGERTLYWRLTAYENLRYFASIYYVPKKVAEERIRNLLHMVGLWDRKDDLVMN 146
++I +V G L RLT E LR FA++Y + + E RI L + L D
Sbjct: 74 RQIGVV-NGGMGLPARLTGREVLRSFAALYDMGRAQTEARIAELDDRLELGRTLDTRAGE 132
Query: 147 YSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQSAIFVRELIKKLVEEEK---KTVLLT 203
YS GMKQ++ IA+A+I DP VL LDE GLD IF R + V + + + L +
Sbjct: 133 YSTGMKQKVIIARAVIQDPAVLVLDEAASGLD----IFARRTLLDFVAQTRAPGRLTLYS 188
Query: 204 THYMHEAEELCDRIAIIDHGRIIALDT 230
TH M EAEE+CDR+AI+ G ++ALDT
Sbjct: 189 THVMSEAEEVCDRVAILHQGELVALDT 215
>sp|P55476|NODI_RHISN NODULATION ATP-BINDING PROTEIN I >gi|2182424|gb|AAB91694.1|
(AE000076) NodI [Rhizobium sp. NGR234]
Length = 343
Score = 167 bits (419), Expect = 1e-40
Identities = 115/319 (36%), Positives = 166/319 (51%), Gaps = 22/319 (6%)
Query: 3 AIEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKILTT 62
AIE+ N+ K Y K+ + ++F + GE FGLLGPNGAGK+T +++
Sbjct: 44 AIELTNVSKSYGDKV-----------VVDQLSFTITSGECFGLLGPNGAGKSTVSRLVLG 92
Query: 63 LLEPTSGEARVLGFDIVKEAREIRKRINLVAEGERTLYWRLTAYENLRYFASIYYVPKKV 122
L P G VLG + AR R RI +V + + TL TA ENL F + + +
Sbjct: 93 LAPPDEGTITVLGEPVPARARLARSRIGVVPQFD-TLDREFTARENLLVFGRYFGLHTRE 151
Query: 123 AEERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQSA 182
EE I LL L + D V S GM++RL +A ALINDP++L LDEPT GLD +
Sbjct: 152 LEEAIPPLLDFARLESKADVPVAQLSGGMQRRLTLACALINDPQLLILDEPTTGLDPHAR 211
Query: 183 IFVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRIIALDTPEGLKKLVRKDT 242
+ E ++ L+ KT+LLTTH+M EA+ LCDR+ +I+HGR I P L D
Sbjct: 212 HLIWERLRSLL-ALGKTILLTTHFMEEADRLCDRLCVIEHGRKIVEGRPHAL-----IDE 265
Query: 243 IVEVRVKNYNGENPFGLAK-IKEEGEKVVLRGP--LDEEDIPKLVEFLVKNNAKVLSVEV 299
+ V G NP L + ++V + G P+ V ++ + ++
Sbjct: 266 QIGCDVIEIYGGNPRELTSVVGPYAQRVEVSGETLFCYSSDPEQVRLQLRGRTGLRLLQ- 324
Query: 300 KEPTLEDVFIKLTGRGLRD 318
+ P LEDVF++LTGR ++D
Sbjct: 325 RPPNLEDVFLRLTGREMKD 343
>sp|P22040|Y415_SYNY3 HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PROTEIN SLL0415
>gi|7445812|pir||S74323 ABC-type transport protein
sll0415 - Synechocystis sp. (strain PCC 6803)
>gi|1001104|dbj|BAA10241.1| (D64001) ABC transporter
[Synechocystis sp.]
Length = 354
Score = 167 bits (419), Expect = 1e-40
Identities = 110/292 (37%), Positives = 169/292 (57%), Gaps = 12/292 (4%)
Query: 28 EALKGITFNVKKGELFGLLGPNGAGKTTTIKILTTLLEPTSGEARVLGFDIVKEAREIRK 87
E+LK ++ V++GE FGLLGPNGAGKTT +KIL ++ + G +LG I R+ ++
Sbjct: 68 ESLKPLSIAVQQGETFGLLGPNGAGKTTLLKILLGVIRASGGRGTLLGKPIGD--RQTKQ 125
Query: 88 RINLVAEGERTLYWRLTAYENLRYFASIYYVPKKVAEERIRNLLHMVGLWDR--KDDLVM 145
R+ + E Y LTA+E L Y S++ + K+ + RI + +VGL + K +
Sbjct: 126 RVGYLPENAY-FYDFLTAWEFLDYIGSLFQIGKQERQRRILAMCDLVGLAQKTAKKKQLR 184
Query: 146 NYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQSAIFVRELIKKLVEEEKKTVLLTTH 205
YS+GM QR+ +A+ALINDPEV+FLDEP GLD VRE+I L +E+ KT+ +H
Sbjct: 185 QYSKGMLQRVGMAQALINDPEVVFLDEPMSGLDPLGRYQVREIILSL-KEQGKTIFFNSH 243
Query: 206 YMHEAEELCDRIAIIDHGRIIALDTPEGLKKLVRKDTIVEVRVKNYNGENPFGLAKIKEE 265
+ + E++CDRIAI+ G ++ + L +++ D EV +K E G
Sbjct: 244 ILADVEQICDRIAILARGELLCSGS---LAEVLGNDEGYEVVLKG-GEEEALGKYLANLS 299
Query: 266 GEKVVLRGPLDEEDIPKLVEFLVKNNAKVLSVEVKEPTLEDVFIK-LTGRGL 316
E+ V G + D+ LV+ L NA+++S+ + P+LED FI+ L RG+
Sbjct: 300 QEQDVWHGHY-QGDVQALVDALPSLNARLISMNLARPSLEDYFIRQLRERGI 350
>sp|P42332|BCRA_BACLI BACITRACIN TRANSPORT ATP-BINDING PROTEIN BCRA
>gi|7445603|pir||S77627 bacitracin transport protein
bcrA - Bacillus licheniformis >gi|437315|gb|AAA99504.1|
(L20573) TTG start codon [Bacillus licheniformis]
Length = 306
Score = 167 bits (418), Expect = 2e-40
Identities = 109/289 (37%), Positives = 163/289 (55%), Gaps = 14/289 (4%)
Query: 33 ITFNVKKGELFGLLGPNGAGKTTTIKILTTLLEPTSGEARVLGFDIVKEAREIRKRINLV 92
+ NVK+G+++G LG NGAGKTTTI++L L++PTSG+ + G + K +EI +RI +
Sbjct: 23 LNINVKQGDIYGFLGRNGAGKTTTIRMLLGLIKPTSGQIEIFGENFFKNKKEILRRIGSI 82
Query: 93 AEGERTLYWRLTAYENLRYFASIYYVPKKVAEERIRNLLHMVGLWDRKDDLVMNYSRGMK 152
E Y LTA ENL A I + KK A I +L +VGL LV +S GMK
Sbjct: 83 VEVPG-FYANLTARENLLINAKIIGIHKKNA---IDEVLEIVGLQHETKKLVGKFSLGMK 138
Query: 153 QRLAIAKALINDPEVLFLDEPTLGLDVQSAIFVRELIKKLVEEEKKTVLLTTHYMHEAEE 212
QRL IA+AL++ PE+L LDEPT GLD +R LI L +E T+ +++H + E E+
Sbjct: 139 QRLGIARALLHYPELLILDEPTNGLDPIGIKEMRRLIHSLAKERNITIFISSHILSEIEQ 198
Query: 213 LCDRIAIIDHGRIIALDTPEGLKKLVRKDTIVEVRVKNYNG-----ENPFGLAKIKEEGE 267
L D + II G+++ + LKK RK +E ++ + N E F + + +
Sbjct: 199 LVDHVGIIHEGKLLEEIPFDHLKKRNRK--YLEFQLSDQNKAVVLMEQHFDIHDYEVHQD 256
Query: 268 KVV-LRGPLDEEDIPKLVEFLVKNNAKVLSVEVKEPTLEDVFIKLTGRG 315
++ + L ++ KL + V+N VL + + E +LED F+KL G G
Sbjct: 257 GIIRVYSHLGQQG--KLNKLFVENGIDVLKITMSEDSLEDYFVKLIGGG 303
>dbj|BAB06933.1| (AP001518) ABC transporter (ATP-binding protein) [Bacillus
halodurans]
Length = 318
Score = 166 bits (417), Expect = 2e-40
Identities = 87/217 (40%), Positives = 135/217 (62%), Gaps = 2/217 (0%)
Query: 29 ALKGITFNVKKGELFGLLGPNGAGKTTTIKILTTLLEPTSGEARVLGFDIVKEAREIRKR 88
A+ ++ +++KGE+FGLLGPNGAGKTT+I ++ L EPTSG +V G D K E++++
Sbjct: 20 AVDHLSLSIRKGEIFGLLGPNGAGKTTSILMMLGLSEPTSGTVQVAGIDSTKYPIEVKRK 79
Query: 89 INLVAEGERTLYWRLTAYENLRYFASIYYVPKKVAEERIRNLLHMVGLWDRKDDLVMNYS 148
+ + + Y +T ENL Y AS+ + K A ER LL VGL + YS
Sbjct: 80 VGYLPDNVG-FYPDMTGMENLLYTASLNGIQKIEAIERANTLLEKVGLTEAAKKKTGQYS 138
Query: 149 RGMKQRLAIAKALINDPEVLFLDEPTLGLDVQSAIFVRELIKKLVEEEKKTVLLTTHYMH 208
RGMKQRL +A L+ PE++ LDEPTLG+D + LI+ L + E TVLL +H++H
Sbjct: 139 RGMKQRLGLADVLMKGPEIIILDEPTLGIDPEGVRDFLHLIRNLNQNENLTVLLCSHHLH 198
Query: 209 EAEELCDRIAIIDHGRIIAL-DTPEGLKKLVRKDTIV 244
+ +++CDR+ I G+++A D + +K+L + +++V
Sbjct: 199 QVQQVCDRVGIFVDGKLLAYGDLDQLVKRLFKHESVV 235
>gi|11498611 ABC transporter, ATP-binding protein [Archaeoglobus fulgidus]
>gi|7445743|pir||F69375 ABC transporter, ATP-binding
protein homolog - Archaeoglobus fulgidus
>gi|2649585|gb|AAB90232.1| (AE001034) ABC transporter,
ATP-binding protein [Archaeoglobus fulgidus]
Length = 285
Score = 166 bits (416), Expect = 3e-40
Identities = 109/292 (37%), Positives = 160/292 (54%), Gaps = 33/292 (11%)
Query: 27 FEALKGITFNVKKGELFGLLGPNGAGKTTTIKILTTLLEPTSGEARVLGFDIVKEAREIR 86
F A+KG+T NV++GE+ GLLGPNG+GKTTTI+ + F +V EIR
Sbjct: 16 FYAVKGLTLNVRRGEILGLLGPNGSGKTTTIRAI---------------FGMVPYEGEIR 60
Query: 87 KRINLVA--EGERTLYWRLTAYENLRYFASIYYVPKKVAEERIRNLLHMVGLWDRKDDLV 144
V LY L+ ENLR+FAS+Y + E R+ +L +V L + LV
Sbjct: 61 NYATSVGWMPQNSPLYLNLSVEENLRFFASLYGIED---ERRVEEMLKLVQLERYRKRLV 117
Query: 145 MNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQSAIFVRELIKKLVEEEKKTVLLTT 204
N S GM+QR +A A+++DPE+L LDEPT G+D + E +KL EE KT+L+TT
Sbjct: 118 KNLSGGMRQRAMLACAMLHDPELLVLDEPTAGVDPPLRVSFWEQFEKL-REEGKTILVTT 176
Query: 205 HYMHEAEELCDRIAIIDHGRIIALDTPEGLKKLVRKDTIVEVRVKNYNGENPFGLAKIKE 264
HYM EAE C+R+ +I +G IA TPE +K+ D ++ ++ ++I
Sbjct: 177 HYMDEAER-CERLVLIRNGSKIAEGTPEEIKRRACGDRLL------LEVDDALAASRILS 229
Query: 265 E-----GEKVVLRGPLDEEDIPKLVEFLVKNNAKVLSVEVKEPTLEDVFIKL 311
+ KVV+ + PK++E L + KV VE++ TLE+ F++L
Sbjct: 230 DYRSWINGKVVVEVDDAASEAPKIIEMLSRAGVKVFRVEIRRCTLEEAFMRL 281
>pir||T50566 probable ABC-type transport protein, ATP-binding component
[imported] - Streptomyces coelicolor
>gi|6469242|emb|CAB61703.1| (AL133220) probable ABC
transporter, ATP-binding component. [Streptomyces
coelicolor A3(2)]
Length = 365
Score = 165 bits (413), Expect = 7e-40
Identities = 105/297 (35%), Positives = 167/297 (55%), Gaps = 14/297 (4%)
Query: 28 EALKGITFNVKKGELFGLLGPNGAGKTTTIKILTTLLEPTSGEARVLGFDIVKEAREIRK 87
+AL G+ +V++G + G+LGPNGAGKTT ++IL+TL+ P SG+A V G+D+V++ R++R+
Sbjct: 50 KALDGVDLDVREGTVMGVLGPNGAGKTTLVRILSTLITPDSGQAHVAGYDVVRQPRQLRR 109
Query: 88 RINLVAEGERTLYWRLTAYENLRYFASIYYVPKKVAEERIRNLLHMVGLWDRKDDLVMNY 147
I L + ++ +L +ENL + + ++ A R LL L + Y
Sbjct: 110 VIGLTGQ-YASVDEKLPGWENLYMIGRLLDLSRRDARTRADELLERFSLTEAGKRPASTY 168
Query: 148 SRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQSAIFVRELIKKLVEEEKKTVLLTTHYM 207
S GM++RL +A ++I P VLFLDEPT GLD ++ V + +K++V + TVLLTT YM
Sbjct: 169 SGGMRRRLDLAASMIGHPAVLFLDEPTTGLDPRTRNEVWDEVKRMV-GDGVTVLLTTQYM 227
Query: 208 HEAEELCDRIAIIDHGRIIALDTPEGLKKLVRKDTIVEVRVKNYNGENPF---------- 257
EAE+L + ++D G++IA E LK V T+ +R + P
Sbjct: 228 EEAEQLASELTVVDRGKVIANGGIEELKAKVGGRTL-RIRPADPLQLRPLAAYLDELGIT 286
Query: 258 GLAKIKEEGEK-VVLRGPLDEEDIPKLVEFLVKNNAKVLSVEVKEPTLEDVFIKLTG 313
GLA + E+ VL L +E + +V + V +V + P+L++VF+ LTG
Sbjct: 287 GLASSTVDTERGTVLVPILSDEQLTAVVGAVTARGITVSAVTTELPSLDEVFLSLTG 343
>sp|P72335|NODI_RHIS3 NODULATION ATP-BINDING PROTEIN I >gi|1531621|gb|AAB16898.1|
(U53327) NodI [Rhizobium sp. N33]
Length = 304
Score = 164 bits (412), Expect = 9e-40
Identities = 110/315 (34%), Positives = 173/315 (54%), Gaps = 22/315 (6%)
Query: 3 AIEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKILTT 62
AI++ ++K + K+ + G++F V GE FGLLGPNGAGK+T ++L
Sbjct: 5 AIDLAGVKKSFGDKL-----------VVNGLSFTVASGECFGLLGPNGAGKSTIARMLLG 53
Query: 63 LLEPTSGEARVLGFDIVKEAREIRKRINLVAEGERTLYWRLTAYENLRYFASIYYVPKKV 122
+ P +G+ VLG + +R RK I +V + + L T ENL F + + +
Sbjct: 54 MTVPDAGKITVLGEPVGARSRLARKSIGVVPQFDN-LDQEFTVRENLLVFGRYFGMSTRK 112
Query: 123 AEERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQSA 182
+E I +LL L + D V S GMK+RL +A+ALINDP++L +DEPT GLD +
Sbjct: 113 IKEVIPSLLEFARLESKADARVGELSGGMKRRLTLARALINDPQLLVMDEPTTGLDPHAR 172
Query: 183 IFVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRIIALDTPEGLKKLVRKDT 242
+ E ++ L+ KT++LTTH+M EAE LCDR+ +++HGR +A +P L +
Sbjct: 173 HLIWERLRFLL-ARGKTIILTTHFMEEAERLCDRLCVLEHGRKLAEGSPHALIEEHIGCQ 231
Query: 243 IVEVRVKNYNGENPFGLAK-IKEEGEKVVLRGP--LDEEDIPKLVEFLVKNNAKVLSVEV 299
++E+ G NP L I+ ++V + G P+ V ++ A + +E
Sbjct: 232 VIEI-----FGGNPQELVSLIRPYVQRVEVSGETLFCYTADPEQVRVQLRGRAGLRLLE- 285
Query: 300 KEPTLEDVFIKLTGR 314
+ P+LEDVF++LTGR
Sbjct: 286 RPPSLEDVFLRLTGR 300
>dbj|BAB07698.1| (AP001520) ABC transporter (ATP-binding protein) [Bacillus
halodurans]
Length = 257
Score = 164 bits (412), Expect = 9e-40
Identities = 114/269 (42%), Positives = 154/269 (56%), Gaps = 21/269 (7%)
Query: 3 AIEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKILTT 62
AI VK L+K + K + LKG+ F V++GE+F LLG NGAGKTTT+ IL+T
Sbjct: 5 AISVKRLKKSFKNK-----------DVLKGVDFAVQRGEIFALLGSNGAGKTTTVNILST 53
Query: 63 LLEPTSGEARVLGFDIVKEAREIRKRINLVAEGERTLYWRLTAYENLRYFASIYYV--PK 120
LL+P GEA + GFD+ ++ +R+ I+L + L LT ENL A + V P
Sbjct: 54 LLKPDEGEASICGFDVQRQPDHVRQSISLTGQ-FAALDGMLTGRENLMIIAKLRGVPNPS 112
Query: 121 KVAEERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQ 180
+VA+ +LL L D + YS GMK+RL IA +LI P V+FLDEPT GLD +
Sbjct: 113 QVAD----HLLARFSLTDAANRRADQYSGGMKRRLDIAMSLIGKPAVIFLDEPTTGLDPE 168
Query: 181 SAIFVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRIIALDTPEGLKKLVRK 240
I V + +K+L T+LLTT Y+ EAE+L DRIAI+ G+II T LK++
Sbjct: 169 GRIEVWDAVKELA-GGGTTILLTTQYLEEAEQLADRIAILHDGKIITTGTLAELKEMF-P 226
Query: 241 DTIVEVRVKNYNGENPFGLAKIKEEGEKV 269
VE K E+ F LA I ++ EKV
Sbjct: 227 PAKVEYVEKQPTLEDIF-LAIIGKKEEKV 254
>pir||S77512 ABC-type transport protein slr1901 - Synechocystis sp. (strain PCC
6803) >gi|1652437|dbj|BAA17359.1| (D90905) ABC
transporter [Synechocystis sp.]
Length = 326
Score = 164 bits (411), Expect = 1e-39
Identities = 109/335 (32%), Positives = 171/335 (50%), Gaps = 35/335 (10%)
Query: 6 VKNLRKLYPKKIPLPF----------RKIEWFEALKGITFNVKKGELFGLLGPNGAGKTT 55
V+NL K+YP + P R+ A++ I+F + G + G LG NGAGKTT
Sbjct: 2 VENLSKVYPIALKSPGLKGTLQHFWQRRYRQILAVQDISFTIPPGAMVGFLGANGAGKTT 61
Query: 56 TIKILTTLLEPTSGEARVLGFDIVKEAREIRKRINLVAEGERTLYWRLTAYENLRYFASI 115
T+K+LT L++P+ G+ RV GFD + +R +LV ++ L W L ++LR +I
Sbjct: 62 TLKMLTGLIKPSGGKVRVAGFDPFRRQTAFLRRTSLVMGQKQQLIWDLPTLDSLRINGAI 121
Query: 116 YYVPKKVAEERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTL 175
Y +P +V E+R+ L M+ L V S G + + + AL++ P VLFLDEPTL
Sbjct: 122 YEIPDQVFEQRLGELSEMLDLTTELKQPVRKLSLGQRMKAELLAALLHHPTVLFLDEPTL 181
Query: 176 GLDVQSAIFVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRIIALDTPEGLK 235
GLDV + + VR +++ + TVLLT+HYM + LC+R+ +I G+++ E L
Sbjct: 182 GLDVNAQVAVRRFLQEYNRRYQATVLLTSHYMADITTLCERVLLIHQGQLMYDGDLEALV 241
Query: 236 KLVRKDTIVEVRVKNYNGENPFGLAKIKEEGEKVVLRGPLDEEDIPKLVEFLVKNN---- 291
+ V V + P L K++ GE + G LV FL+K
Sbjct: 242 ERFSPYRQVAVEL-----SAPIPLEKLQLYGEVESVEG--------LLVRFLLKRESLTT 288
Query: 292 --AKVLS------VEVKEPTLEDVFIKLTGRGLRD 318
AK+L+ + V +P +E++ +L +G D
Sbjct: 289 AIAKLLAELPVSDLSVSDPPIEEIIGRLFSQGNLD 323
>pir||S32908 hypothetical protein 4 - Streptomyces antibioticus
>gi|153382|gb|AAA26793.1| (L06249) ATP-binding protein
[Streptomyces antibioticus]
Length = 325
Score = 164 bits (411), Expect = 1e-39
Identities = 106/297 (35%), Positives = 165/297 (54%), Gaps = 14/297 (4%)
Query: 28 EALKGITFNVKKGELFGLLGPNGAGKTTTIKILTTLLEPTSGEARVLGFDIVKEAREIRK 87
+AL G+ +V++G + G+LGPNGAGKTT ++IL+TL+ P SG+A V G+D+V++ R++R+
Sbjct: 14 KALDGVDLDVREGTVMGVLGPNGAGKTTLVRILSTLITPDSGQATVAGYDVVRQPRQLRR 73
Query: 88 RINLVAEGERTLYWRLTAYENLRYFASIYYVPKKVAEERIRNLLHMVGLWDRKDDLVMNY 147
I L + ++ +L +ENL + + +K A R LL L + Y
Sbjct: 74 VIGLTGQ-YASVDEKLPGWENLYLIGRLLDLSRKEARARADELLERFSLTEAARRPAGTY 132
Query: 148 SRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQSAIFVRELIKKLVEEEKKTVLLTTHYM 207
S GM++RL +A ++I P VL+LDEPT GLD ++ V + +K +V + TVLLTT YM
Sbjct: 133 SGGMRRRLDLAASMIGRPAVLYLDEPTTGLDPRTRNEVWDEVKAMV-GDGVTVLLTTQYM 191
Query: 208 HEAEELCDRIAIIDHGRIIALDTPEGLKKLVRKDTIVEVRVKNYNGENPF---------- 257
EAE+L + ++D GR+IA E LK V T+ VR + P
Sbjct: 192 EEAEQLASELTVVDRGRVIAKGGIEELKARVGGRTL-RVRPVDPLQLRPLAGMLDELGIT 250
Query: 258 GLAKIKEEGEKVVLRGP-LDEEDIPKLVEFLVKNNAKVLSVEVKEPTLEDVFIKLTG 313
GLA + E L P L +E + +V + + S+ + P+L++VF+ LTG
Sbjct: 251 GLASTTVDTETGALLVPILSDEQLTAVVGAVTARGITLSSITTELPSLDEVFLSLTG 307
>gb|AAK42548.1| ABC transporter, ATP binding protein [Sulfolobus solfataricus]
Length = 248
Score = 163 bits (409), Expect = 2e-39
Identities = 97/253 (38%), Positives = 151/253 (59%), Gaps = 15/253 (5%)
Query: 3 AIEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKILTT 62
A+ V NLRK K E LKG++F+V+ GE+FG++GPNGAGKTTT++IL
Sbjct: 9 AVSVTNLRKRIGNK-----------EILKGLSFDVESGEVFGIVGPNGAGKTTTLRILAG 57
Query: 63 LLEPTSGEARVLGFDIVKEAREIRKRINLVAEGERTLYWRLTAYENLRYFASIYYVPKKV 122
+++ +G+A+V G + EA++ I+ + E + Y +LT YENL ++A +Y K
Sbjct: 58 IIKNFNGDAKVFGLRPI-EAKQ-NGYISYMPE-DAFPYEKLTGYENLDFYAELYAKGDKE 114
Query: 123 AEERIRNL-LHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQS 181
+E+ L + + L +R D YSRGMK+RL IA+ L+ P++ LDEPT LDV+S
Sbjct: 115 LKEKYLKLGIEIANLGERIYDKTAEYSRGMKRRLIIARTLMVMPKLSVLDEPTSALDVES 174
Query: 182 AIFVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRIIALDTPEGLKKLVRKD 241
A+ +R +I ++ T++L++H M E E LCDRI +I+ GRI+A P+ + K
Sbjct: 175 AVRIRNIILEMARRYNMTIILSSHNMLEVEYLCDRITLINDGRIVANGKPKEIIKSTNSK 234
Query: 242 TIVEVRVKNYNGE 254
+ E +K G+
Sbjct: 235 NLEEAFIKLVFGD 247
>pir||S73019 daunorubicin resistance protein drrA - Mycobacterium leprae
>gi|467205|gb|AAA17362.1| (U00023) drrA; L518_F2_43
[Mycobacterium leprae]
Length = 331
Score = 163 bits (409), Expect = 2e-39
Identities = 116/325 (35%), Positives = 173/325 (52%), Gaps = 29/325 (8%)
Query: 2 KAIEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKILT 61
KA+ V+ +RK Y K + AL ++F+V +GE+ GLLGPNGAGKTT + IL+
Sbjct: 6 KAVMVRGVRKTYGKGKII---------ALDDVSFDVDRGEVIGLLGPNGAGKTTMVDILS 56
Query: 62 TLLEPTSGEARVLGFDIVKEAREIRKRINLVAEGERTLYWRLTAYENLRYFASIYYVPKK 121
TL P G A V G+D+V E +R+ I +V + + +L+ +NL F +Y + K
Sbjct: 57 TLTRPDRGLATVAGYDVVSEPAGVRRSI-MVTGQQVAVDDQLSGEQNLILFGRLYGLSKS 115
Query: 122 VAEERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQS 181
VA R + LL L V YS GM++R+ IA L+ P+V FLDEPT GLD +S
Sbjct: 116 VARVRTQELLEQFDLLHAGKRRVGTYSGGMRRRIDIACGLVVQPQVAFLDEPTTGLDPRS 175
Query: 182 AIFVRELIKKLVEEEKK---TVLLTTHYMHEAEELCDRIAIIDHGRIIALDTPEGLKKLV 238
R+ I LV K+ LLTT Y+ EA+EL DRI +IDHG +IA T LK V
Sbjct: 176 ----RQAIWDLVASFKQIGIATLLTTQYLEEADELSDRIILIDHGTVIAEGTASELKHRV 231
Query: 239 RKDTIVEVRVKNYN--GENPFGLAKIKEEGEKVVLRGPLDEEDIP------KLVEF---L 287
+T E+ ++ G L + E + +L D +P L+E +
Sbjct: 232 -GETFCEIVPRDLKDLGTVVAALGSLLPERSRAMLTPTSDRITMPAPDGTQTLIEAARRI 290
Query: 288 VKNNAKVLSVEVKEPTLEDVFIKLT 312
+ + ++ + ++ P+L+DVF+ +T
Sbjct: 291 DEVSVELADIALRRPSLDDVFLSMT 315
>pir||H71066 probable ATP-binding transport protein - Pyrococcus horikoshii
>gi|3257647|dbj|BAA30330.1| (AP000005) 253aa long
hypothetical ATP-binding transport protein [Pyrococcus
horikoshii]
Length = 253
Score = 163 bits (409), Expect = 2e-39
Identities = 94/267 (35%), Positives = 156/267 (58%), Gaps = 22/267 (8%)
Query: 4 IEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKILTTL 63
I V+NLRK + K E LKGI F V GE++GLLGPNG+GK+TT++IL+ +
Sbjct: 2 IIVENLRKKFGSK-----------EVLKGINFTVNDGEIYGLLGPNGSGKSTTMRILSGI 50
Query: 64 LEPTSGEARVLGFDIVKEAREIRKRINLVAEGERTLYWRLTAYENLRYFASIYYVPKKVA 123
+ G+ V G D+ ++ ++++ + V E LY LT E + + +P+ +
Sbjct: 51 ITDFEGKVMVAGVDVSRDPMKVKEIVGYVPETP-ALYESLTPAEFFSFIGGVRRIPQDIL 109
Query: 124 EERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQSAI 183
EER++ L+ G+ + L+ S G KQ++++ AL++DP+VL LDE GLD +SA
Sbjct: 110 EERVKRLVDAFGIGKYMNQLIGTLSFGTKQKISLISALLHDPQVLILDEAMNGLDPKSAR 169
Query: 184 FVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRIIALDTPEGLKKLVRKDTI 243
REL+ + +EE K+++ +TH + AE +CDRI II GRI+A T + L+++ R++ +
Sbjct: 170 IFRELLFEF-KEEGKSIVFSTHILALAEVMCDRIGIIYEGRIVAEGTIDELREIAREEKL 228
Query: 244 VEVRVKNYNGENPFGLAKIKEEGEKVV 270
++ +K L + KEE ++V
Sbjct: 229 EDIFLK---------LTQAKEEVSQIV 246
>gb|AAC72253.1| (U91581) LctF [Lactococcus lactis subsp. lactis]
Length = 306
Score = 162 bits (407), Expect = 4e-39
Identities = 110/315 (34%), Positives = 168/315 (52%), Gaps = 24/315 (7%)
Query: 2 KAIEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKILT 61
K +E K L K + K+ +++ +T +VKKG++FG LGPNGAGK+TT+K++
Sbjct: 5 KILETKKLSKKFGKEY-----------SVRNLTISVKKGDIFGFLGPNGAGKSTTMKMIL 53
Query: 62 TLLEPTSGEARVLGFDIVKEARE-IRKRINLVAEGERTLYWRLTAYENLRYFASIYYVPK 120
LL PT GE +V G + + + K + + E E + Y L+ ENL+ + +P
Sbjct: 54 GLLHPTEGEVKVFGKKLDNSVKNSVLKDVGCLIE-EPSFYPNLSGLENLKLVQKLLNLPY 112
Query: 121 KVAEERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQ 180
I +L++V L D+K+ LV NYS GMKQRL IA ALI P++L LDEPT GLD
Sbjct: 113 ----HNIEKVLNIVKLEDQKNKLVKNYSLGMKQRLGIALALIKFPKLLILDEPTNGLDPT 168
Query: 181 SAIFVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRIIALDTPEGLKKLVRK 240
+RELIK L E+ TVL+++H + E E++ + +AII G ++ EG + +
Sbjct: 169 GIREIRELIKSLPEKYGITVLISSHLLSEIEQIANTVAIIKKGELLY----EGELSKLEE 224
Query: 241 DTIVEVRVK--NYNGENPFGLA-KIKEEGEKVVLRGPLDEEDIPKLVEFLVKNNAKVLSV 297
I E++ N + E GL +K++ + D +E LV K+
Sbjct: 225 QPIFEIQTNLINQSFEVLQGLGYTVKKQSNDTIQIMNSDLNKRAAAIEALVSQQIKIYEA 284
Query: 298 EVKEPTLEDVFIKLT 312
+ LE VFI++T
Sbjct: 285 KSVTKNLEQVFIEMT 299
>gb|AAD44229.1|AF143772_35 (AF143772) DrrA [Mycobacterium avium]
Length = 315
Score = 162 bits (406), Expect = 5e-39
Identities = 115/302 (38%), Positives = 162/302 (53%), Gaps = 28/302 (9%)
Query: 29 ALKGITFNVKKGELFGLLGPNGAGKTTTIKILTTLLEPTSGEARVLGFDIVKEAREIRKR 88
AL G+ F+V G + GLLG NGAGKTTTI IL+TL+ PTSG A V G D+V+ E+R
Sbjct: 21 ALAGVDFSVPAGTVCGLLGHNGAGKTTTINILSTLIRPTSGRASVAGHDVVRRPAEVRAS 80
Query: 89 INLVAEGERT-LYWRLTAYENLRYFASIYYVPKKVAEERIRNLLHMVGLWDRKDDLVMNY 147
I + G+ T L LT ENL F+ + + ++ A+ R LL L D D + Y
Sbjct: 81 IGMA--GQFTGLDPMLTGRENLVLFSRLRGLNRRRAKARADELLEQFNLVDAADRRLSTY 138
Query: 148 SRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQSAIFVRELIKKLVEEEKKTVLLTTHYM 207
S GM +R+ +A AL+ P+VLFLDEPT GLD +S V L+ L + TVLLTT Y+
Sbjct: 139 SGGMFRRVDLASALVVPPKVLFLDEPTTGLDPRSRRDVWALVSSL-RVQGITVLLTTQYL 197
Query: 208 HEAEELCDRIAIIDHGRIIALDTPEGLKKLVRKDTIVEVRVKNYNGENPFGLAK------ 261
EA+ L D I +IDHGR+IA T E LK+ V NP L +
Sbjct: 198 EEADVLSDSIVVIDHGRVIASGTSEELKRAVGTSYC------QVTPANPADLPQVVATLT 251
Query: 262 ------IKEEGEKVVLRGPLDEEDIPKLVEFLVKNNA---KVLSVEVKEPTLEDVFIKLT 312
I + V + P + + LVE + +A ++ + +++P+L++ F+ LT
Sbjct: 252 GLDGVDIDNDTGSVSVFAP---DGVATLVEVFRRVDALGLELADISLRKPSLDEAFLHLT 308
Query: 313 GR 314
R
Sbjct: 309 ER 310
>pir||T31682 bcrA protein - Bacillus licheniformis >gi|4464278|gb|AAD21213.1|
(AF007865) BcrA [Bacillus licheniformis]
Length = 306
Score = 162 bits (405), Expect = 6e-39
Identities = 106/288 (36%), Positives = 158/288 (54%), Gaps = 12/288 (4%)
Query: 33 ITFNVKKGELFGLLGPNGAGKTTTIKILTTLLEPTSGEARVLGFDIVKEAREIRKRINLV 92
+ NVK+G+++G LG NGAGKTTTI++L L++PTSG+ + G + K +EI +RI +
Sbjct: 23 LNINVKQGDIYGFLGRNGAGKTTTIRMLLGLIKPTSGQIEIFGENFFKNKKEILRRIGSI 82
Query: 93 AEGERTLYWRLTAYENLRYFASIYYVPKKVAEERIRNLLHMVGLWDRKDDLVMNYSRGMK 152
E Y LTA ENL A I + KK A I +L +VGL LV +S GMK
Sbjct: 83 VEVPG-FYANLTARENLLINAKIIGIHKKNA---IDEVLEIVGLQHETKKLVGKFSLGMK 138
Query: 153 QRLAIAKALINDPEVLFLDEPTLGLDVQSAIFVRELIKKLVEEEKKTVLLTTHYMHEAEE 212
QRL IA+AL++ PE+ LDEPT GLD +R LI L +E T+ +++H + E E+
Sbjct: 139 QRLGIARALLHYPELSILDEPTNGLDPIGIKEMRRLIHSLAKERNITIFISSHILSEIEQ 198
Query: 213 LCDRIAIIDHGRIIALDTPEGLKKLVRKDTIVEVRVKN-----YNGENPFGLAKIKEEGE 267
L D + II G+++ + LKK RK ++ +N + ++ ++G
Sbjct: 199 LVDHVGIIHEGKLLEEIPFDHLKKRNRKYLEFQLSDQNKAVVLMEQHSDIHDYEVHQDG- 257
Query: 268 KVVLRGPLDEEDIPKLVEFLVKNNAKVLSVEVKEPTLEDVFIKLTGRG 315
++R KL + V+N VL + + E +LED F+KL G G
Sbjct: 258 --IIRVYSHLGQQGKLNKLFVENGIDVLKITMSEDSLEDYFVKLIGGG 303
>pir||H75077 abc transporter, ATP-binding protein PAB1696 - Pyrococcus abyssi
(strain Orsay) >gi|5458437|emb|CAB49925.1| (AJ248286)
ABC transporter, ATP-binding protein [Pyrococcus abyssi]
Length = 253
Score = 162 bits (405), Expect = 6e-39
Identities = 98/267 (36%), Positives = 157/267 (58%), Gaps = 22/267 (8%)
Query: 4 IEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKILTTL 63
I V+NLRK + K E LKGI+F VK GE++GLLGPNG+GK+TT++IL+ +
Sbjct: 2 IIVENLRKRFGGK-----------EVLKGISFTVKDGEIYGLLGPNGSGKSTTMRILSGI 50
Query: 64 LEPTSGEARVLGFDIVKEAREIRKRINLVAEGERTLYWRLTAYENLRYFASIYYVPKKVA 123
+ G+ V G ++ K+ ++++ + V E LY LT E + + +PK +
Sbjct: 51 ITDFEGKVIVGGVEVAKDPLQVKRIVGYVPETP-ALYESLTPAEFFSFVGGVRGIPKDIL 109
Query: 124 EERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQSAI 183
EER+R L+ + + L+ S G KQ++++ +L++DP+VL LDE GLD +SA
Sbjct: 110 EERVRKLVEAFEIKKYMNQLIGTLSFGTKQKISLISSLLHDPKVLILDEAMNGLDPKSAR 169
Query: 184 FVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRIIALDTPEGLKKLVRKDTI 243
REL+ + +EE K+++ +TH + AE +CDR+ II GRIIA T E LK++ +++ +
Sbjct: 170 IFRELLYEF-KEEGKSIVFSTHVLALAELICDRVGIIYQGRIIAEGTVEELKEISKEERL 228
Query: 244 VEVRVKNYNGENPFGLAKIKEEGEKVV 270
+V +K L + KEE +VV
Sbjct: 229 EDVFLK---------LTQAKEEIAQVV 246
>sp|P50332|NODI_RHIGA NODULATION ATP-BINDING PROTEIN I >gi|1001916|emb|CAA60881.1|
(X87578) nodI [Rhizobium galegae]
Length = 347
Score = 161 bits (404), Expect = 8e-39
Identities = 106/290 (36%), Positives = 161/290 (54%), Gaps = 21/290 (7%)
Query: 33 ITFNVKKGELFGLLGPNGAGKTTTIKILTTLLEPTSGEARVLGFDIVKEAREIRKRINLV 92
++F V+ GE FGLLGPNGAGK+T ++L + P++G+ VLG + +AR R I +V
Sbjct: 67 LSFGVRAGECFGLLGPNGAGKSTITRMLLGMATPSAGKISVLGLPVPGKARLARASIGVV 126
Query: 93 AEGERTLYWRLTAYENLRYFASIYYVPKKVAEERIRNLLHMVGLWDRKDDLVMNYSRGMK 152
++ + L T ENL F + + + E+ I +LL L + D V + S GMK
Sbjct: 127 SQFDN-LDMEFTVRENLLVFGRYFQMSTRAIEKLIPSLLEFAQLEAKADVRVSDLSGGMK 185
Query: 153 QRLAIAKALINDPEVLFLDEPTLGLDVQSAIFVRELIKKLVEEEKKTVLLTTHYMHEAEE 212
+RL +A+AL+NDP++L LDEPT GLD + + E ++ L+ KT+LLTTH M EAE
Sbjct: 186 RRLTLARALVNDPQLLILDEPTTGLDPPARHQIWERLRSLL-IRGKTILLTTHMMDEAER 244
Query: 213 LCDRIAIIDHGRIIALDTPEGLKKLVRKDTIVEVRVKNYNGENPFGLA--------KIKE 264
+CDR+ +++ GR+IA P L + + ++EV G NP L+ +I+
Sbjct: 245 MCDRLCVLEGGRMIAEGPPLSLIEDIIGCPVIEV-----YGGNPDELSLIVRPHVDRIET 299
Query: 265 EGEKVVLRGPLDEEDIPKLVEFLVKNNAKVLSVEVKEPTLEDVFIKLTGR 314
GE + ++ KL EF L + + LEDVF++LTGR
Sbjct: 300 SGETLFCYTVNSDQVRAKLREF------PSLRLLERPANLEDVFLRLTGR 343
>pir||H72269 ABC transporter, ATP-binding protein - Thermotoga maritima (strain
MSB8) >gi|4981861|gb|AAD36376.1|AE001785_7 (AE001785)
ABC transporter, ATP-binding protein [Thermotoga
maritima]
Length = 258
Score = 161 bits (404), Expect = 8e-39
Identities = 101/283 (35%), Positives = 156/283 (54%), Gaps = 40/283 (14%)
Query: 2 KAIEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKILT 61
K +EV +RK + + L + F ++G+ ++G NG+GK+T +KI+
Sbjct: 3 KVVEVSGVRKSFGE-----------LRVLDKVDFYAEEGDFKVIVGENGSGKSTLLKIMI 51
Query: 62 TLLEPTSGEARVLGFDIVKEAREIRKRINLVAEGERTLYWRLTAYENLRYFASIYYVPKK 121
LL P GE +VLG D+ K +++ RI +V ER+LYW+LTA+ENL F +Y VPKK
Sbjct: 52 GLLLPDDGEVKVLGVDVKKHWKKLSARIGVVLANERSLYWKLTAWENLDIFGGVYGVPKK 111
Query: 122 VAEERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQS 181
V ER+ LL GL++ KD V +S GM+++L I KALI+DPEVLF+DE GLD S
Sbjct: 112 VRRERMEELLKRFGLFEYKDKPVEEFSTGMRKKLMICKALIHDPEVLFIDEILNGLDPPS 171
Query: 182 AIFVRELIKKLVEEEKK--TVLLTTHYMHE-AEELCDRIAIIDHGRIIALDTPEGLKKLV 238
VRE++ L E ++ T+++ +H +H E C + ++ +GR+
Sbjct: 172 ---VREMVGFLDERNRRGLTIVMISHVLHVLPENAC--VVLLRNGRV------------- 213
Query: 239 RKDTIVEVRVKNYNGENPFGLAKIKEEGEKVVLRGPLDEEDIP 281
+EVR K+ E +++ E E ++ +DEED P
Sbjct: 214 ----QMEVRYKDIRSER----SEVYEVFENLIRGRNMDEEDTP 248
>emb|CAB76006.1| (AL157916) putative ABC transporter, ATP-binding subunit
[Streptomyces coelicolor A3(2)]
Length = 312
Score = 161 bits (402), Expect = 1e-38
Identities = 112/316 (35%), Positives = 162/316 (50%), Gaps = 24/316 (7%)
Query: 1 MKAIEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKIL 60
M IEV +LRK Y + + G++F V++GE+FG+LGPNGAGKTTT++ +
Sbjct: 13 MPVIEVTDLRKSYGGR-----------PVVDGVSFAVEEGEIFGVLGPNGAGKTTTVECV 61
Query: 61 TTLLEPTSGEARVLGFDIVKEAREIRKRINLVAEGERTLYWRLTAYENLRYFASIYYVPK 120
L P +G RV G D V + R + + + + + L +LT E L +A+ Y PK
Sbjct: 62 EGLRVPDAGRVRVTGLDPVADHRRVAEVLGAQLQ-QSELQPKLTVREALELYAAFY--PK 118
Query: 121 KVAEERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQ 180
+ L +V + D + S G KQRL IA AL+ DP V+ LDE T GLD +
Sbjct: 119 PADWRPLAERLDLVPMLDTR---FAKLSGGQKQRLFIALALVGDPRVVVLDELTTGLDPR 175
Query: 181 SAIFVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRIIALDTPEGLKKLVRK 240
+ +LI+ + TVLL TH+M EA+ LCDRIA+ID GRI ALDTP GL +
Sbjct: 176 ARRETWQLIED-IRAGGVTVLLVTHFMEEAQRLCDRIAVIDRGRIAALDTPAGLIRRSTG 234
Query: 241 DTIVEVRVKNYNGENPF----GLAKIKEEGEKVVLRGPLDEEDIPKLVEFLVKNNAKVLS 296
T++ E LA + +V L G +E + ++ L +
Sbjct: 235 ATVISFTPSAPLDEADLRALPELASAEFRDGRVTLSG--TDETVNAVITLLARTRVTAHQ 292
Query: 297 VEVKEPTLEDVFIKLT 312
+ V + TL+D F+ LT
Sbjct: 293 LRVTDTTLDDAFLDLT 308
>gb|AAK40417.1| ABC transporter, ATP binding protein [Sulfolobus solfataricus]
Length = 246
Score = 160 bits (401), Expect = 2e-38
Identities = 91/229 (39%), Positives = 141/229 (60%), Gaps = 17/229 (7%)
Query: 4 IEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKILTTL 63
+EVK+L K Y K E L+GI+F V KGE+F LLGPNGAGKTTT+KIL+ +
Sbjct: 6 VEVKDLYKEYKDK-----------EVLRGISFTVYKGEIFSLLGPNGAGKTTTVKILSCV 54
Query: 64 LEPTSGEARVLGFDIVKEAREIRKRINLVAEGERTLYWRLTAYENLRYFASIYYVPKKVA 123
L+PT GE +V+G+ + E +IR+RI ++ + + + LT EN+ YF +Y
Sbjct: 55 LKPTRGEVKVIGYKVPNECGKIRERIGVMPQDYQG-FLDLTVRENIEYFVKLY----NGK 109
Query: 124 EERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQSAI 183
E ++ L+ ++ L K+ + S G +R+ IA A E+LFLDEPT+GLD ++
Sbjct: 110 ETQVDELISLLDLEKVKNQKLRYLSGGYVRRVGIASAFAGSQEILFLDEPTVGLDPKARR 169
Query: 184 FVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRIIALDTPE 232
E+I K+++ + T+ LTTHY+ EA++L DR+AI+ G++I + T +
Sbjct: 170 GFWEII-KMMKNKGVTIFLTTHYLDEAQKLSDRVAILYGGKLIKVSTAD 217
>pir||S75436 hypothetical protein c05019 - Sulfolobus solfataricus
>gi|1707842|emb|CAA69520.1| (Y08257) putative ABC
transporter [Sulfolobus solfataricus]
Length = 246
Score = 160 bits (401), Expect = 2e-38
Identities = 91/229 (39%), Positives = 141/229 (60%), Gaps = 17/229 (7%)
Query: 4 IEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKILTTL 63
+EVK+L K Y K E L+GI+F V KGE+F LLGPNGAGKTTT+KIL+ +
Sbjct: 6 VEVKDLYKEYKDK-----------EVLRGISFTVYKGEIFSLLGPNGAGKTTTVKILSCV 54
Query: 64 LEPTSGEARVLGFDIVKEAREIRKRINLVAEGERTLYWRLTAYENLRYFASIYYVPKKVA 123
L+PT GE +V+G+ + E +IR+RI ++ + + + LT EN+ YF +Y
Sbjct: 55 LKPTRGEVKVIGYKVPNECGKIRERIGVMPQDYQG-FLDLTVRENIEYFVKLY----NGK 109
Query: 124 EERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQSAI 183
E ++ L+ ++ L K+ + S G +R+ IA A E+LFLDEPT+GLD ++
Sbjct: 110 ETQVDELISLLDLEKVKNQKLRYLSGGYVRRVGIASAFAGSQEILFLDEPTVGLDPKARR 169
Query: 184 FVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRIIALDTPE 232
E+I K+++ + T+ LTTHY+ EA++L DR+AI+ G++I + T +
Sbjct: 170 GFWEII-KMMKNKGVTIFLTTHYLDEAQKLSDRVAILYGGKLIKVSTAD 217
>pir||B72334 ABC transporter, ATP-binding protein - Thermotoga maritima (strain
MSB8) >gi|4981322|gb|AAD35875.1|AE001747_18 (AE001747)
ABC transporter, ATP-binding protein [Thermotoga
maritima]
Length = 260
Score = 160 bits (401), Expect = 2e-38
Identities = 91/216 (42%), Positives = 132/216 (60%), Gaps = 3/216 (1%)
Query: 22 RKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKILTTLLEPTSGEARVLGFDIVKE 81
RK F A+ I +V+ GE++G LGPNGAGKTTTIK+LT +L+PT GE +LG +
Sbjct: 19 RKFGDFTAVDHIDLSVRPGEIYGFLGPNGAGKTTTIKMLTGVLKPTEGEVEILGMKMSTH 78
Query: 82 AREIRKRINLVAEGERTLYWRLTAYENLRYFASIYYVPKKVAEERIRNLLHMVGLWDRKD 141
EI+K I ++ + E +Y LT E L + IY + ++ ++RI L + D
Sbjct: 79 EIEIKKSIGVIPD-EPKIYSHLTGKEFLDFIIEIYDLKEEEIDKRIAELCEAFKV-DYLG 136
Query: 142 DLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQSAIFVRELIKKLVEEEKKTVL 201
V S GMKQ+L + + P+V+FLDEPT+GLD +SA ++ L++K +E +
Sbjct: 137 KRVGEMSHGMKQKLMLVSVFMRKPKVIFLDEPTVGLDAKSARILKLLLRKYA-DEGAAIF 195
Query: 202 LTTHYMHEAEELCDRIAIIDHGRIIALDTPEGLKKL 237
LTTH + AE++CDRI II+ GR+IA T E L+KL
Sbjct: 196 LTTHILEIAEKMCDRIGIINKGRLIAEGTMEELRKL 231
>gb|AAD20382.1| (AF125999) daunorubicin resistance protein A [Mycobacterium avium]
Length = 315
Score = 159 bits (399), Expect = 3e-38
Identities = 98/211 (46%), Positives = 127/211 (59%), Gaps = 4/211 (1%)
Query: 29 ALKGITFNVKKGELFGLLGPNGAGKTTTIKILTTLLEPTSGEARVLGFDIVKEAREIRKR 88
AL G+ F+V G + GLLG NGAGKTTTI IL+TL+ PTSG V G D+V E+R
Sbjct: 21 ALAGVDFSVPAGTVCGLLGHNGAGKTTTINILSTLIRPTSGRGNVAGHDVVARPAEVRAN 80
Query: 89 INLVAEGERT-LYWRLTAYENLRYFASIYYVPKKVAEERIRNLLHMVGLWDRKDDLVMNY 147
I + G+ T L LT ENL F+ + + ++ A+ R LL L D D + Y
Sbjct: 81 IGMA--GQFTGLDPMLTGRENLVLFSRLRGLNRRRAKARADELLEQFNLVDAADRRLSTY 138
Query: 148 SRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQSAIFVRELIKKLVEEEKKTVLLTTHYM 207
S GM +R+ +A AL+ P+VLFLDEPT GLD +S V L+ L + TVLLTT Y+
Sbjct: 139 SGGMFRRVDLASALVVPPKVLFLDEPTTGLDPRSRRDVWALVSSL-RVQGITVLLTTQYL 197
Query: 208 HEAEELCDRIAIIDHGRIIALDTPEGLKKLV 238
EA+ L D I +IDHGR+IA T E LK+ V
Sbjct: 198 EEADVLSDSIVVIDHGRVIASGTSEELKRAV 228
>dbj|BAB04164.1| (AP001508) ABC transporter (ATP-binding protein) [Bacillus
halodurans]
Length = 306
Score = 159 bits (399), Expect = 3e-38
Identities = 104/294 (35%), Positives = 161/294 (54%), Gaps = 19/294 (6%)
Query: 29 ALKGITFNVKKGELFGLLGPNGAGKTTTIKILTTLLEPTSGEARVLGFDIVKEAREIRKR 88
A+ I VK+GE++G LGPNGAGKTTTI++L L++ + G ++ G D+ + +I K
Sbjct: 22 AVDRINLKVKEGEIYGFLGPNGAGKTTTIRMLLGLIKASHGSIKIFGKDLKQHRLDILKN 81
Query: 89 INLVAEGERTLYWRLTAYENLRYFASIYYVPKKVAEERIRNLLHMVGLWDRKDDLVMNYS 148
I + E + Y L+ +NL I VPK RI +L +V L D V YS
Sbjct: 82 IGALVESP-SYYPHLSGEDNLETVRKIVKVPKS----RIAEVLELVRLTKVADRKVQEYS 136
Query: 149 RGMKQRLAIAKALINDPEVLFLDEPTLGLDVQSAIFVRELIKKLVEEEKKTVLLTTHYMH 208
GMKQRLAIA AL+ +P ++ LDEPT GLD I +R LI +L +E TVLL++H +
Sbjct: 137 LGMKQRLAIAAALLANPRLVILDEPTNGLDPAGIIEIRNLILRLPKEYGITVLLSSHLLS 196
Query: 209 EAEELCDRIAIIDHGRIIALDTPEGLKKLVRKDTIVEVRVKNYNGENPFGLAKI-KEEGE 267
E E++ ++ II G++I D+ E L+K + + +P A I +E G
Sbjct: 197 EVEQVASQVGIIAKGKLIFQDSIEELRKKANRKIFLST-------SHPEVAATILQERGI 249
Query: 268 KV------VLRGPLDEEDIPKLVEFLVKNNAKVLSVEVKEPTLEDVFIKLTGRG 315
V ++ +E+I +LV+ V+ + V + + +LE++F++LT G
Sbjct: 250 NVDTQARGLVMNDRSDEEIAQLVKAFVEKDIDVYRISDETSSLEEIFLQLTKGG 303
>emb|CAC08414.1| (AL392178) putative ABC transport system ATP-binding protein
[Streptomyces coelicolor]
Length = 324
Score = 159 bits (399), Expect = 3e-38
Identities = 111/314 (35%), Positives = 160/314 (50%), Gaps = 18/314 (5%)
Query: 3 AIEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKILTT 62
AI LRK Y K L GI V +G +F LLGPNGAGKTT +KIL+T
Sbjct: 5 AITANGLRKSYGDKT-----------VLDGIDLAVPEGTVFSLLGPNGAGKTTAVKILST 53
Query: 63 LLEPTSGEARVLGFDIVKEAREIRKRINLVAEGERTLYWRLTAYENLRYFASIYYVPKKV 122
L+ P +G+ RV G D+ + +R I + + + +T EN+ A ++++P+
Sbjct: 54 LVTPDAGDIRVGGHDLASAPQAVRGAIGVTGQFS-AVDGLITGEENMLLMADLHHLPRPE 112
Query: 123 AEERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQSA 182
LL L + YS GMK+RL IA L+ DP ++FLDEPT GLD +S
Sbjct: 113 GRRVAAELLERFDLTEAAGKPASTYSGGMKRRLDIAMTLVGDPRIIFLDEPTTGLDPRSR 172
Query: 183 IFVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRIIALDTPEGLKKLVRKDT 242
+ ++I+ LV + TV LTT Y+ EA+EL DRIA++ GRI A T E LK+LV
Sbjct: 173 HTMWQIIRALV-TDGVTVFLTTQYLEEADELADRIAVLHDGRIAAEGTAEELKRLV-PGG 230
Query: 243 IVEVRVKNYNGENPFGLAKIKEEGE--KVVLRGPLD--EEDIPKLVEFLVKNNAKVLSVE 298
V +R + A G+ + L+ P D + D+ +++ L + +
Sbjct: 231 HVRLRFTDPTAYRDATAALPHSAGDDNTLTLQIPSDGSQRDLRTILDRLDDAGIEADELT 290
Query: 299 VKEPTLEDVFIKLT 312
V P L+DVF LT
Sbjct: 291 VHTPDLDDVFFALT 304
>pir||B64816 ABC-type transport protein ybhF - Escherichia coli
>gi|1787012|gb|AAC73881.1| (AE000181) putative
ATP-binding component of a transport system [Escherichia
coli K12] >gi|4062352|dbj|BAA35454.1| (D90716) ATP
binding cassette transporter ABC2 [Escherichia coli]
Length = 583
Score = 159 bits (398), Expect = 4e-38
Identities = 89/214 (41%), Positives = 134/214 (62%), Gaps = 3/214 (1%)
Query: 22 RKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKILTTLLEPTSGEARVLGFDIVKE 81
+K F A + F VK+GE+FGLLGPNGAGK+TT K++ LL PTSG+A VLG D+ +
Sbjct: 342 KKFGDFAATDHVNFAVKRGEIFGLLGPNGAGKSTTFKMMCGLLVPTSGQALVLGMDLKES 401
Query: 82 AREIRKRINLVAEGERTLYWRLTAYENLRYFASIYYVPKKVAEERIRNLLHMVGLWDRKD 141
+ + R+ + +A+ + +LY LT +NLR+F+ +Y + + E+I + GL
Sbjct: 402 SGKARQHLGYMAQ-KFSLYGNLTVEQNLRFFSGVYGLRGRAQNEKISRMSEAFGLKSIAS 460
Query: 142 DLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQSAIFVRELIKKLVEEEKKTVL 201
G KQRLA+A +L+++P++LFLDEPT G+D + I +V E+ TV+
Sbjct: 461 HATDELPLGFKQRLALACSLMHEPDILFLDEPTSGVDPLTRREFWLHINSMV-EKGVTVM 519
Query: 202 LTTHYMHEAEELCDRIAIIDHGRIIALDTPEGLK 235
+TTH+M EA E CDRI ++ G++IA TP+ LK
Sbjct: 520 VTTHFMDEA-EYCDRIGLVYRGKLIASGTPDDLK 552
Score = 110 bits (272), Expect = 2e-23
Identities = 80/289 (27%), Positives = 142/289 (48%), Gaps = 9/289 (3%)
Query: 29 ALKGITFNVKKGELFGLLGPNGAGKTTTIKILTTLLEPTSGEARVLGFDIVKEAREIRKR 88
A+ + + G + GL+GP+GAGKTT +++L LL+P SG A V+GFD +K +
Sbjct: 27 AVAPLDCTIHAGYVTGLVGPDGAGKTTLMRMLAGLLKPDSGSATVIGFDPIKNDGALHAV 86
Query: 89 INLVAEGERTLYWRLTAYENLRYFASIYYVPKKVAEERIRNLLHMVGLWDRKDDLVMNYS 148
+ + + + LY LT ENL +A + V + ++ LL L L S
Sbjct: 87 LGYMPQ-KFGLYEDLTVMENLNLYADLRSVTGEARKQTFARLLEFTSLGPFTGRLAGKLS 145
Query: 149 RGMKQRLAIAKALINDPEVLFLDEPTLGLDVQSAIFVRELIKKLVEEEKKTVLLTTHYMH 208
GMKQ+L +A L+ +P+VL LDEP +G+D S + +++ +L E +L +T Y+
Sbjct: 146 GGMKQKLGLACTLVGEPKVLLLDEPGVGVDPISRRELWQMVHELA-GEGMLILWSTSYLD 204
Query: 209 EAEELCDRIAIIDHGRIIALDTPEGLKKLVRKDTIVEVRVKNYNGENPFGLAKIKEEGEK 268
EAE+ C + +++ G ++ P+ L + + + + N + K+ + +
Sbjct: 205 EAEQ-CRDVLLMNEGELLYQGEPKALTQTMAGRSFLMTSPHEGNRKLLQRALKLPQVSDG 263
Query: 269 VV----LRGPLDEEDIPKLVEFLVKNNAKVLSVEVKEPTLEDVFIKLTG 313
++ +R L +E P + + +++ P ED FI L G
Sbjct: 264 MIQGKSVRLILKKEATPDDIRH--ADGMPEININETTPRFEDAFIDLLG 310
>sp|P75776|YBHF_ECOLI HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PROTEIN YBHF
Length = 578
Score = 159 bits (398), Expect = 4e-38
Identities = 89/214 (41%), Positives = 134/214 (62%), Gaps = 3/214 (1%)
Query: 22 RKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKILTTLLEPTSGEARVLGFDIVKE 81
+K F A + F VK+GE+FGLLGPNGAGK+TT K++ LL PTSG+A VLG D+ +
Sbjct: 337 KKFGDFAATDHVNFAVKRGEIFGLLGPNGAGKSTTFKMMCGLLVPTSGQALVLGMDLKES 396
Query: 82 AREIRKRINLVAEGERTLYWRLTAYENLRYFASIYYVPKKVAEERIRNLLHMVGLWDRKD 141
+ + R+ + +A+ + +LY LT +NLR+F+ +Y + + E+I + GL
Sbjct: 397 SGKARQHLGYMAQ-KFSLYGNLTVEQNLRFFSGVYGLRGRAQNEKISRMSEAFGLKSIAS 455
Query: 142 DLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQSAIFVRELIKKLVEEEKKTVL 201
G KQRLA+A +L+++P++LFLDEPT G+D + I +V E+ TV+
Sbjct: 456 HATDELPLGFKQRLALACSLMHEPDILFLDEPTSGVDPLTRREFWLHINSMV-EKGVTVM 514
Query: 202 LTTHYMHEAEELCDRIAIIDHGRIIALDTPEGLK 235
+TTH+M EA E CDRI ++ G++IA TP+ LK
Sbjct: 515 VTTHFMDEA-EYCDRIGLVYRGKLIASGTPDDLK 547
Score = 110 bits (272), Expect = 2e-23
Identities = 80/289 (27%), Positives = 142/289 (48%), Gaps = 9/289 (3%)
Query: 29 ALKGITFNVKKGELFGLLGPNGAGKTTTIKILTTLLEPTSGEARVLGFDIVKEAREIRKR 88
A+ + + G + GL+GP+GAGKTT +++L LL+P SG A V+GFD +K +
Sbjct: 22 AVAPLDCTIHAGYVTGLVGPDGAGKTTLMRMLAGLLKPDSGSATVIGFDPIKNDGALHAV 81
Query: 89 INLVAEGERTLYWRLTAYENLRYFASIYYVPKKVAEERIRNLLHMVGLWDRKDDLVMNYS 148
+ + + + LY LT ENL +A + V + ++ LL L L S
Sbjct: 82 LGYMPQ-KFGLYEDLTVMENLNLYADLRSVTGEARKQTFARLLEFTSLGPFTGRLAGKLS 140
Query: 149 RGMKQRLAIAKALINDPEVLFLDEPTLGLDVQSAIFVRELIKKLVEEEKKTVLLTTHYMH 208
GMKQ+L +A L+ +P+VL LDEP +G+D S + +++ +L E +L +T Y+
Sbjct: 141 GGMKQKLGLACTLVGEPKVLLLDEPGVGVDPISRRELWQMVHELA-GEGMLILWSTSYLD 199
Query: 209 EAEELCDRIAIIDHGRIIALDTPEGLKKLVRKDTIVEVRVKNYNGENPFGLAKIKEEGEK 268
EAE+ C + +++ G ++ P+ L + + + + N + K+ + +
Sbjct: 200 EAEQ-CRDVLLMNEGELLYQGEPKALTQTMAGRSFLMTSPHEGNRKLLQRALKLPQVSDG 258
Query: 269 VV----LRGPLDEEDIPKLVEFLVKNNAKVLSVEVKEPTLEDVFIKLTG 313
++ +R L +E P + + +++ P ED FI L G
Sbjct: 259 MIQGKSVRLILKKEATPDDIRH--ADGMPEININETTPRFEDAFIDLLG 305
>gb|AAG20087.1| (AE005088) ABC transport protein; Trp2 [Halobacterium sp. NRC-1]
Length = 249
Score = 159 bits (398), Expect = 4e-38
Identities = 94/235 (40%), Positives = 136/235 (57%), Gaps = 14/235 (5%)
Query: 2 KAIEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKILT 61
+AIE + L K Y A++ I V G ++G LGPNGAGKTTT+++LT
Sbjct: 4 RAIEARALTKRYGDTT-----------AIERIDLAVPSGSVYGFLGPNGAGKTTTMRMLT 52
Query: 62 TLLEPTSGEARVLGFDIVKEAREIRKRINLVAEGERTLYWRLTAYENLRYFASIYYVPKK 121
TL+EPTSG A V G ++ A + I + E E L+ LTA E LRY A + +P
Sbjct: 53 TLVEPTSGTATVAGVEVTDRASVV-PNIGYLPE-EPPLHAELTAREQLRYIAGLRDIPDP 110
Query: 122 VAEERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQS 181
AE+RI +LL L D D + YS+GMKQ+ I +A+++DP+VLFLDEPT GLD ++
Sbjct: 111 RAEQRITDLLERFSLGDDADRRISTYSKGMKQKTGIIQAMLHDPDVLFLDEPTSGLDPRA 170
Query: 182 AIFVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRIIALDTPEGLKK 236
A VR+ I L + TV L+TH + ++L D + ++ G ++ P+ LK+
Sbjct: 171 ARTVRDTIADLTAGD-ATVFLSTHILPVVDDLADTVGVLYDGSLVTEGPPDALKQ 224
>pir||JN0849 hypothetical 35K protein - Streptomyces lividans
>gi|47168|emb|CAA46525.1| (X65556) open reading frame
[Streptomyces lividans] >gi|5918477|emb|CAB56355.1|
(AL118514) ABC transport protein, ATP-binding subunit
[Streptomyces coelicolor A3(2)]
Length = 326
Score = 158 bits (396), Expect = 7e-38
Identities = 109/312 (34%), Positives = 164/312 (51%), Gaps = 21/312 (6%)
Query: 4 IEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKILTTL 63
IEV +LR++Y FEA++GI F+V++GE+F LLG NGAGKT+T+++L L
Sbjct: 10 IEVTDLRRVYGGG----------FEAVRGIDFSVRRGEVFALLGTNGAGKTSTVELLEGL 59
Query: 64 LEPTSGEARVLGFDIVKEAREIRKRINLVAEGERTLYWRLTAYENLRYFASIYYVPKKVA 123
P G RVLG D E +R R ++ + E LT E R +A + A
Sbjct: 60 AAPAGGRVRVLGHDPYTERAAVRPRTGVMLQ-EGGFPSELTVAETARMWAGCVSGARPPA 118
Query: 124 EERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQSAI 183
E +L +VGL + V S G ++RL +A AL+ DPEVLFLDEP+ GLD +
Sbjct: 119 E-----VLALVGLEAKSGTRVKQLSGGQRRRLDLALALLGDPEVLFLDEPSTGLDAEGRR 173
Query: 184 FVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRIIALDTPEGLKKLVRKDTI 243
EL+ L ++ TVLLTTHY+ EAE L DR+AI+ GRI A TP +
Sbjct: 174 DTWELVGAL-RDQGTTVLLTTHYLEEAEHLADRLAIMHDGRIAATGTPAEVTAAQPSHIS 232
Query: 244 VEVRVKNYNGENP----FGLAKIKEEGEKVVLRGPLDEEDIPKLVEFLVKNNAKVLSVEV 299
E+ + G+ P G++ + +G V LR + L+ + + ++ ++V
Sbjct: 233 FELPDGYFVGDLPPLAELGVSDHETDGRTVKLRTRELQRAATGLLVWAAQAAVELRRLDV 292
Query: 300 KEPTLEDVFIKL 311
+ +LE+ F+ +
Sbjct: 293 RSASLEEAFLSI 304
>pir||JC5348 cdd4 protein - Clostridium difficile >gi|1770140|emb|CAA63569.1|
(X92982) cdd4 [Clostridium difficile]
Length = 301
Score = 158 bits (396), Expect = 7e-38
Identities = 101/290 (34%), Positives = 161/290 (54%), Gaps = 14/290 (4%)
Query: 30 LKGITFNVKKGELFGLLGPNGAGKTTTIKILTTLLEPTSGEARVLGFDIVKEAR-EIRKR 88
+K I V +G ++G LGPNGAGK+TT+K+L L +PT G +LG ++ ++ R I K
Sbjct: 20 VKDIDLRVPQGAVYGFLGPNGAGKSTTLKMLLGLAKPTQGNINILGKELNEKNRISILKD 79
Query: 89 INLVAEGERTLYWRLTAYENLRYFASIYYVPKKVAEERIRNLLHMVGLWDRKDDLVMNYS 148
I + E + Y LT EN+ + +PKK E ++ +V L ++K+ V YS
Sbjct: 80 IGSLIESP-SYYGHLTGLENMTIMQRLLDLPKKNVNEALK----IVRLENQKNKKVSQYS 134
Query: 149 RGMKQRLAIAKALINDPEVLFLDEPTLGLDVQSAIFVRELIKKLVEEEKKTVLLTTHYMH 208
GMKQRL IA A++ P++L LDEPT GLD +RELIK L E+ TVL+++H +
Sbjct: 135 LGMKQRLGIAMAIMKFPKLLILDEPTNGLDPAGIEEIRELIKSLPEKYGMTVLISSHLLS 194
Query: 209 EAEELCDRIAIIDHGRIIALDTPEGLKKLVRKDTIVEVRVKNYNGE----NPFGLAKIKE 264
E +++ I II+HG ++ D+ + L R + + ++ KN N G + +
Sbjct: 195 EIDQIATSIGIINHGELVFQDSIKELHN--RGQSQIAIKTKNVVSAQKLLNTKGYMSLIQ 252
Query: 265 EGEKVVLRGPLDEEDIPKLVEFLVKNNAKVLSVEVKEPTLEDVFIKLTGR 314
+G + L + D+ K+ LV +N V +E + +LED+F++L R
Sbjct: 253 DGYLTIEN--LKDSDVAKINGMLVHSNIDVFRIEEHKKSLEDIFLELLVR 300
>emb|CAC08286.1| (AL392148) putative ABC transporter ATP-binding protein
[Streptomyces coelicolor]
Length = 327
Score = 158 bits (396), Expect = 7e-38
Identities = 105/290 (36%), Positives = 150/290 (51%), Gaps = 7/290 (2%)
Query: 29 ALKGITFNVKKGELFGLLGPNGAGKTTTIKILTTLLEPTSGEARVLGFDIVKEAREIRKR 88
A+ G+ V G +FG LGPNG+GKTTTI++L L+EPTSG ARVLG + + AR + R
Sbjct: 37 AVDGLDLTVPAGSVFGFLGPNGSGKTTTIRMLMGLIEPTSGSARVLGRPMPRAARAVLPR 96
Query: 89 INLVAEGERTLYWRLTAYEN-LRYFASIYYVPKKVAEERIRNLLHMVGLWDRKDDLVMNY 147
+ + EG LY L+ +N LRY A+ + ER+ L VGL Y
Sbjct: 97 VGALIEGP-ALYGFLSGRDNLLRYDAADPTADPRTRRERVAAALDRVGLAAAGGKKAKAY 155
Query: 148 SRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQSAIFVRELIKKLVEEEKKTVLLTTHYM 207
S GMKQRL +A AL+ +L LDEPT GLD Q +R L+++L + TV L++H +
Sbjct: 156 SLGMKQRLGLAAALLQPRRLLVLDEPTNGLDPQGMREIRSLVRELA-SDGTTVFLSSHLL 214
Query: 208 HEAEELCDRIAIIDHGRIIALDTPEGLKKLVRKDTIVEVRVKNYNGE--NPFGLAKIKEE 265
E E++C A++ GR+I L R +V G A + +
Sbjct: 215 DEIEQVCTHAAVMAQGRLITQGAVADLAAGARGRLVVTTPDAGDAARVLKEQGAADVVVD 274
Query: 266 GEKVVLRGPLDEEDIPKLVEFLVKNNAKVLSVEVKEPTLEDVFIKLTGRG 315
G++V P E D+ ++ LV +V V+ +LED F+ LTG G
Sbjct: 275 GDRVTAEPP--ERDLAEVNAALVAARVRVRGFVVERASLEDAFVALTGEG 322
>emb|CAB60255.1| (AJ250862) MrsF protein [Bacillus sp. HIL-Y85/54728]
Length = 303
Score = 157 bits (394), Expect = 1e-37
Identities = 97/298 (32%), Positives = 168/298 (55%), Gaps = 18/298 (6%)
Query: 22 RKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKILTTLLEPTSGEARVLGFDIVKE 81
+K + ++ G+ +++GE++G LGPNGAGKTTTI++L L++PT G + G ++ K
Sbjct: 13 KKYKKHTSVDGLNLRIRRGEIYGFLGPNGAGKTTTIRMLLGLIKPTKGNIEIFGQNLNKN 72
Query: 82 AREIRKRINLVAEGERTLYWRLTAYENLRYFASIYYVPKKVAEERIRNLLHMVGLWDRKD 141
+I +RI + E T Y LT YENL + +P E+++ +L V L +
Sbjct: 73 RLQILQRIGSLVESP-TYYGNLTGYENLEAVRRLRGLP----EQQVNEVLETVRLSKVAN 127
Query: 142 DLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQSAIFVRELIKKLVEEEKKTVL 201
L YS GMKQRL IA AL++ P++L LDEPT GLD +RELIK+L + +V+
Sbjct: 128 RLTKEYSLGMKQRLGIAVALLSSPDLLILDEPTNGLDPSGIQEIRELIKEL-PKSGMSVI 186
Query: 202 LTTHYMHEAEELCDRIAIIDHGRIIALDTPEGLKKLVRKDTIVEVRVKNYNGENPFGLAK 261
+++H + E +++ ++ II++G++I D+ L + ++ +++V V +
Sbjct: 187 VSSHLLSEIDQMATQVGIINNGKMIFQDSIASLHQ--KRKPLLKVGVSDVIEAKTI---- 240
Query: 262 IKEEGEKVVLR------GPLDEEDIPKLVEFLVKNNAKVLSVEVKEPTLEDVFIKLTG 313
+ +G KV L+ + E + ++ L+ + V +E K +LED+F++LTG
Sbjct: 241 LNRKGLKVDLQKNYLWLSQTEPEFVSEINSILLHSGLSVFRLEEKTRSLEDIFLELTG 298
>sp|P36879|YADG_ECOLI HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PROTEIN YADG
>gi|628771|pir||S45204 probable ABC-type transport
protein yagD - Escherichia coli
>gi|473794|dbj|BAA05583.1| (D26562) 'ORF' [Escherichia
coli] >gi|1786319|gb|AAC73238.1| (AE000122) putative
ATP-binding component of a transport system [Escherichia
coli K12]
Length = 308
Score = 156 bits (391), Expect = 3e-37
Identities = 101/319 (31%), Positives = 174/319 (53%), Gaps = 33/319 (10%)
Query: 3 AIEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKILTT 62
A+E++ L+K YP + +AL+GI V+ G+ + LLGPNGAGK+TTI I+++
Sbjct: 4 ALELQQLKKTYPGGV----------QALRGIDLQVEAGDFYALLGPNGAGKSTTIGIISS 53
Query: 63 LLEPTSGEARVLGFDIVKEAREIRKRINLVAEGERTLYWRLTAYENLRYF----ASIYYV 118
L+ TSG V G+D+ K+ ++++ LV + + +E ++ A Y V
Sbjct: 54 LVNKTSGRVSVFGYDLEKDVVNAKRQLGLVPQ-----EFNFNPFETVQQIVVNQAGYYGV 108
Query: 119 PKKVAEERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLD 178
+K A R L + LW ++++ S GMK+RL IA+AL+++P++L LDEPT G+D
Sbjct: 109 ERKEAYIRSEKYLKQLDLWGKRNERARMLSGGMKRRLMIARALMHEPKLLILDEPTAGVD 168
Query: 179 VQSAIFVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRIIALDTPEGLKKLV 238
++ + +K L ++ T++LTTHY+ EAE LC I II HG ++ + + L +
Sbjct: 169 IELRRSMWGFLKDL-NDKGTTIILTTHYLEEAEMLCRNIGIIQHGELVENTSMKALLAKL 227
Query: 239 RKDT-IVEVRVKNYNGENPFGLAKIKEEGEKVVLRGPLD-----EEDIPKLVEFLVKNNA 292
+ +T I+++ K+ L K+ ++V L+ E+ I + L +
Sbjct: 228 KSETFILDLAPKS-------PLPKLDGYQYRLVDTATLEVEVLREQGINSVFTQLSEQGI 280
Query: 293 KVLSVEVKEPTLEDVFIKL 311
+VLS+ K LE++F+ L
Sbjct: 281 QVLSMRNKANRLEELFVSL 299
>gb|AAG19180.1| (AE005015) ABC transporter, ATP-binding protein; Trp5
[Halobacterium sp. NRC-1]
Length = 287
Score = 156 bits (390), Expect = 4e-37
Identities = 99/288 (34%), Positives = 157/288 (54%), Gaps = 20/288 (6%)
Query: 29 ALKGITFNVKKGELFGLLGPNGAGKTTTIKILTTLLEPTSGEARVLGFDIVKEAREIRKR 88
A+ G++F+V GE+FGL+GPNGAGKT+T+K+L L+EP++G+ V GFD A +R+
Sbjct: 16 AVDGVSFDVGAGEVFGLVGPNGAGKTSTLKMLCGLVEPSAGDITVNGFDAGDTA--MRRT 73
Query: 89 INLVAEGERTLYWRLTAYENLRYFASIYYVPKKVAEERIRNLLHMVGLWDRKDDLVMNYS 148
+ + E E LY +T LR+FA +Y V + A ERI L + L D +D V ++S
Sbjct: 74 LGFLPE-ESPLYDEMTPRSYLRFFADLYDVDRATANERIEAALDRLDL-DARDRPVGDFS 131
Query: 149 RGMKQRLAIAKALINDPEVLFLDEPTLGLDVQSAIFVRELIKKLVEEEKKTVLLTTHYMH 208
+GM +++AIA++L+NDP+VL DEP GLD + V E ++L + KT++ + H +H
Sbjct: 132 KGMTRKVAIARSLVNDPDVLVYDEPASGLDPLTTNTVIEFTRELA-ADGKTIVFSAHDLH 190
Query: 209 EAEELCDRIAIIDHGRIIALDTPEGLKK---LVRKDTIVEVRVKNYNGENPFGLAKIKEE 265
E +CDR+AI+ G+ A T ++ V +V V + N + +
Sbjct: 191 HVESVCDRVAIMRDGQFAATGTLADIRDEHGEVSYRVFTDVDVDDARPSNGRYVTTVDSM 250
Query: 266 GEKVVLRGPLDEEDIPKLVEFLVKNNAKVLSVEVKEPTLEDVFIKLTG 313
+ +R + V+ + E TLEDVF+ +TG
Sbjct: 251 ADVDAIRAAAADA------------GGGVVDIRTDESTLEDVFLDVTG 286
>pir||S72783 probable ABC-type transport protein B1496_F3_97 - Mycobacterium
leprae >gi|466902|gb|AAA17147.1| (U00013) abc2;
B1496_F3_97 [Mycobacterium leprae]
>gi|2398710|emb|CAB16175.1| (Z99125) ABC-type
transporter [Mycobacterium leprae]
Length = 315
Score = 156 bits (390), Expect = 4e-37
Identities = 105/296 (35%), Positives = 158/296 (52%), Gaps = 16/296 (5%)
Query: 29 ALKGITFNVKKGELFGLLGPNGAGKTTTIKILTTLLEPTSGEARVLGFDIVKEAREIRKR 88
A+ + ++ E+ LLGPNGAGKTTT+++ + P +G VLG D + + +R R
Sbjct: 29 AVSNLDLDIHSAEVLALLGPNGAGKTTTVEMCEGFVRPDAGTIEVLGLDPITDNARLRAR 88
Query: 89 INLVAEGERTLYWRLTAYENLRYFASIYYVPKKVAEERIRNLLHMVGLWDRKDDLVMNYS 148
I ++ +G Y A E L AS Y + E LL +GL D S
Sbjct: 89 IGVMLQGGGG-YPAARAGEMLNLVAS--YAADPLDPEW---LLETLGLTDVARTTYRRLS 142
Query: 149 RGMKQRLAIAKALINDPEVLFLDEPTLGLDVQSAIFVRELIKKLVEEEKKTVLLTTHYMH 208
G +QRLA+A L+ PE++FLDEPT G+D + + V ELI L + TV+LTTH +
Sbjct: 143 GGQQQRLALACTLVGRPELVFLDEPTAGMDTHARLLVWELIDTL-RRDGVTVVLTTHQLK 201
Query: 209 EAEELCDRIAIIDHGRIIALDTPEGLKKLVRKDTI-------VEVRVKNYNGENPFGLAK 261
EAEEL DR+ IIDHGR+IA TP L KD + +++ + + + +
Sbjct: 202 EAEELADRLVIIDHGRMIAAGTPTELMHTGAKDQLRFSAPPRLDLSLLAFALPEDYKTTE 261
Query: 262 IKEEGEKVVLRGPLDEEDIPKLVEFLVKNNAKVLSVEVKEPTLEDVFIKLTGRGLR 317
+ GE +V GP+D + + + + + N ++ V++ +LEDVF+ LTGR LR
Sbjct: 262 L-TPGEYLV-AGPIDPQVLATVTAWCAQINVLTTNMRVEQHSLEDVFLDLTGRKLR 315
>pir||T09008 cdd4-like protein ScnF - Streptococcus pyogenes
>gi|2502072|gb|AAB92604.1| (AF026542) ScnF
[Streptococcus pyogenes]
Length = 299
Score = 155 bits (387), Expect = 8e-37
Identities = 105/314 (33%), Positives = 168/314 (53%), Gaps = 30/314 (9%)
Query: 3 AIEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKILTT 62
AIE++ L K+Y + KI V++GE++G LGPNGAGKTTT+K++ +
Sbjct: 4 AIELRKLSKVYQDITTVDLEKI-----------TVREGEIYGFLGPNGAGKTTTMKMILS 52
Query: 63 LLEPTSGEARVLGFDIVKEAREIRKRINLVAEGERTLYWRLTAYENLRYFASIYYVPKKV 122
L+ PT GE + G DI +R +++ E + Y LT YENL F +
Sbjct: 53 LVSPTLGEILINGEDIKGNHAYLRVIGSMIEEP--SYYPNLTGYENLLVFQKMVGFD--- 107
Query: 123 AEERIRNLLHMVGLWDRKD--DLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQ 180
E I L +VGL + + LV YS GMKQRLA+A AL+ P++L LDEPT GLD
Sbjct: 108 -ESNIWPTLALVGLAEENNRKKLVKAYSLGMKQRLALAFALVKKPKILLLDEPTNGLDPA 166
Query: 181 SAIFVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRIIALDTPEGLKKLVRK 240
+RELI KL +E+ TV +++ + E E + DR+ II+HGR++ EG + ++
Sbjct: 167 GIHEIRELIVKLAKEKGLTVFISSQILSEIEHIADRVGIINHGRLVY----EGEIEAIKS 222
Query: 241 DTIVEVRVKNYNGEN------PFGLAKIKEEGEKVVLRGPLDEEDIPKLVEFLVKNNAKV 294
+T +E+ +++ N +G ++ V +D + + + +L++N+ ++
Sbjct: 223 NTWIEIG-GDFSQNNIVQSLINYGQVEVLGASASHVKFKNIDNDKLADVGTYLIENDYRI 281
Query: 295 LSVEVKEPTLEDVF 308
V + LED+F
Sbjct: 282 FRVVRESENLEDIF 295
>pir||B75076 daunorubicin resistance ATP-binding protein drra PAB1703 -
Pyrococcus abyssi (strain Orsay)
>gi|5458423|emb|CAB49911.1| (AJ248286) DAUNORUBICIN
RESISTANCE ATP-BINDING PROTEIN DRRA [Pyrococcus abyssi]
Length = 314
Score = 155 bits (387), Expect = 8e-37
Identities = 100/324 (30%), Positives = 175/324 (53%), Gaps = 20/324 (6%)
Query: 1 MKAIEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKIL 60
M +EVK++ K K P P ++ A+ ++F+ GE+ G+LGPNGAGKTTT++++
Sbjct: 1 MPILEVKSVTK----KFPTPKGEVI---AVNNVSFSANSGEVLGILGPNGAGKTTTLRMI 53
Query: 61 TTLLEPTSGEARVLGFDIVKEAREIRKRINLVAEGERTLYWRLTAYENLRYFASIYYVPK 120
T+ P SGE V G D VK E+RKRI + + E L L+ + + Y+ K
Sbjct: 54 ATIYRPDSGEVLVDGIDAVKNPLEVRKRIAYMTQ-EPDLTPPLSVRDYIIYYFRFRGFSK 112
Query: 121 KVAEERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQ 180
+ A++ ++L + GL S G+K+R+ +A AL +D ++FLDEPT G+D +
Sbjct: 113 RDAKKHCEDILELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPR 172
Query: 181 SAIFVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRIIALDTPEGLKKLVRK 240
S ELIK+ +E++ TV+LT+H ++E E L DR+ I++ G+I+A +P+ LKK K
Sbjct: 173 SKRKTWELIKEKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKELKKRFGK 232
Query: 241 DT--IVEVRVKNY--------NGENPFGLAKIKEEGEKVVLRGPLDEEDIPKLVEFLVKN 290
++E +KN+ +N + +++ V + ++ I +++ +
Sbjct: 233 TVRIVLEEPIKNFELLKEELLRVKNVKDVRLARDDSFDVYFKSL--DDSINGILQVISPQ 290
Query: 291 NAKVLSVEVKEPTLEDVFIKLTGR 314
K+ + EDV++++ R
Sbjct: 291 ELKIKDIFTATANFEDVYLEIIER 314
>sp|P08720|NODI_RHILV NODULATION ATP-BINDING PROTEIN I >gi|78028|pir||A24400 nodulation
protein nodI - Rhizobium leguminosarum
>gi|46214|emb|CAA68618.1| (Y00548) nodI [Rhizobium
leguminosarum] >gi|225122|prf||1209215A gene nodI
[Rhizobium leguminosarum]
Length = 311
Score = 154 bits (385), Expect = 1e-36
Identities = 105/318 (33%), Positives = 164/318 (51%), Gaps = 28/318 (8%)
Query: 3 AIEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKILTT 62
AI++ + K Y KI + ++F + GE FGLLGPNGAGK+T +++
Sbjct: 12 AIDLAGVSKSYGGKI-----------VVNDLSFTIAAGECFGLLGPNGAGKSTITRMILG 60
Query: 63 LLEPTSGEARVLGFDIVKEAREIRKRINLVAEGERTLYWRLTAYENLRYFASIYYVPKKV 122
+ P+ G+ VLG + R R +I +V++ + L T ENL + + + +
Sbjct: 61 MTSPSVGKITVLGAQEPGQVRLARAKIGIVSQFDN-LDLEFTVRENLLVYGRYFRMSTRE 119
Query: 123 AEERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQSA 182
E I +LL L + + V + S GMK+RL +A ALINDP++L LDEPT GLD +
Sbjct: 120 IETVIPSLLEFARLESKANTRVADLSGGMKRRLTLAGALINDPQLLILDEPTTGLDPHAR 179
Query: 183 IFVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRIIALDTPEGLKKLVRKDT 242
+ E ++ L+ KT+LLTTH M EAE LCDR+ +++ GR IA P L +
Sbjct: 180 HLIWERLRSLL-ARGKTILLTTHIMEEAERLCDRLCVLEAGRKIAEGRPHALIEEQIGCP 238
Query: 243 IVEVRVKNYNGENPFGLAKIKEEGEKVVLRGPL------DEEDIPKLVEFLVKNNAKVLS 296
++E+ Y G+ I+ ++ + G D E + + +N ++L
Sbjct: 239 VIEI----YGGDPQELSLLIRPNARRLEISGETLFCYTPDPEQV--RAQLRAYSNLRLLE 292
Query: 297 VEVKEPTLEDVFIKLTGR 314
+ P LEDVF++LTGR
Sbjct: 293 ---RPPNLEDVFLRLTGR 307
>pir||A83142 probable ATP-binding component of ABC transporter PA4037 [imported]
- Pseudomonas aeruginosa (strain PAO1)
>gi|9950232|gb|AAG07424.1|AE004820_9 (AE004820) probable
ATP-binding component of ABC transporter [Pseudomonas
aeruginosa]
Length = 308
Score = 154 bits (385), Expect = 1e-36
Identities = 95/290 (32%), Positives = 159/290 (54%), Gaps = 16/290 (5%)
Query: 33 ITFNVKKGELFGLLGPNGAGKTTTIKILTTLLEPTSGEARVLGFDIVKEAREIRKRINLV 92
++F + +GE+ GLLGPNGAGK+TT+K+L+ L P++G R+ GFD+ +AR+ +K I +
Sbjct: 20 LSFRIDRGEIVGLLGPNGAGKSTTLKMLSGFLAPSAGSVRIFGFDMQDKARQAQKLIGYL 79
Query: 93 AEGERTLYWRLTAYENLRYFASIYYVPKKVAEERIRNLLHMVGLWDRKDDLVMNYSRGMK 152
E + Y +T L + ASI + RI + + + L D + ++ S+G K
Sbjct: 80 PENAPS-YGEMTVEGFLAFVASIRDYSGREKRRRIDSAMDCMELRDERRSIIETLSKGFK 138
Query: 153 QRLAIAKALINDPEVLFLDEPTLGLDVQSAIFVRELIKKLVEEEKKTVLLTTHYMHEAEE 212
+R+A+A+A+++DPE+L LDEPT GLD VR+L+K L E K V+++TH + E
Sbjct: 139 RRVALAQAILHDPELLLLDEPTDGLDPNQKHQVRQLVKNL--SESKIVVISTHILEEVSF 196
Query: 213 LCDRIAIIDHGRIIALDTPEGLKKLVRKDTIVEVRVKNYNGENPFGLAKI---------- 262
+C R +I+ GR++A +TP L+ R V + ++ +P +A +
Sbjct: 197 MCSRALVINGGRLLADNTPGELRTRSRYHHAVSLSIE--APVDPLAIAMLPGVAGIEGRP 254
Query: 263 KEEGEKVVLRGPLDEEDIPKLVEFLVKNNAKVLSVEVKEPTLEDVFIKLT 312
G +L P + +P L + + +V V + LE+VF +LT
Sbjct: 255 DRAGTLTILARP-GAQILPALNRLIHGSGWRVSGVRTEHGQLEEVFRQLT 303
>pir||D70984 probable drrA protein - Mycobacterium tuberculosis (strain H37RV)
>gi|1781083|emb|CAB06095.1| (Z83857) drrA [Mycobacterium
tuberculosis]
Length = 331
Score = 153 bits (383), Expect = 2e-36
Identities = 114/324 (35%), Positives = 167/324 (51%), Gaps = 29/324 (8%)
Query: 3 AIEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKILTT 62
A+ V +RK Y K KI AL ++F V++GE+ GLLGPNGAGKTT + IL+T
Sbjct: 7 AVVVNGVRKTYGKG------KIV---ALDDVSFKVRRGEVIGLLGPNGAGKTTMVDILST 57
Query: 63 LLEPTSGEARVLGFDIVKEAREIRKRINLVAEGERTLYWRLTAYENLRYFASIYYVPKKV 122
L P +G A + G+D+V E +R+ I +V + + L+ +NL F ++ + K
Sbjct: 58 LTRPDAGSAIIAGYDVVSEPAGVRRSI-MVTGQQVAVDDALSGEQNLVLFGRLWGLSKSA 116
Query: 123 AEERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQSA 182
A +R LL L V YS GM++R+ IA L+ P+V FLDEPT GLD +S
Sbjct: 117 ARKRAAELLEQFSLVHAGKRRVGTYSGGMRRRIDIACGLVVQPQVAFLDEPTTGLDPRS- 175
Query: 183 IFVRELIKKLVEEEKK---TVLLTTHYMHEAEELCDRIAIIDHGRIIALDTPEGLKKLVR 239
R+ I LV KK LLTT Y+ EA+ L DRI +IDHG IIA T LK
Sbjct: 176 ---RQAIWDLVASFKKLGIATLLTTQYLEEADALSDRIILIDHGIIIAEGTANELKHRA- 231
Query: 240 KDTIVEVRVKNYNGENPF--GLAKIKEEGEKVVLRGPLDEEDIP------KLVEF---LV 288
DT E+ ++ + L + E + +L D +P LVE +
Sbjct: 232 GDTFCEIVPRDLKDLDAIVAALGSLLPEHHRAMLTPDSDRITMPAPDGIRMLVEAARRID 291
Query: 289 KNNAKVLSVEVKEPTLEDVFIKLT 312
+ ++ + ++ P+L+ VF+ +T
Sbjct: 292 EARIELADIALRRPSLDHVFLAMT 315
>gi|11498626 ABC transporter, ATP-binding protein [Archaeoglobus fulgidus]
>gi|7445710|pir||E69377 ABC transporter, ATP-binding
protein homolog - Archaeoglobus fulgidus
>gi|2649574|gb|AAB90222.1| (AE001033) ABC transporter,
ATP-binding protein [Archaeoglobus fulgidus]
Length = 275
Score = 153 bits (383), Expect = 2e-36
Identities = 104/311 (33%), Positives = 168/311 (53%), Gaps = 42/311 (13%)
Query: 4 IEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKILTTL 63
+EV+NL K Y FEA+KGI+F+V++GE+ GL+G NGAGK+TT+KIL L
Sbjct: 2 LEVRNLFKRYGS-----------FEAVKGISFSVRRGEVLGLIGENGAGKSTTLKILAGL 50
Query: 64 LEPTSGEARVLGFDIVKEAREIRKRINLVAEGERTLYWRLTAYENLRYFASIYYVPKKVA 123
+ P GE R G D +E + I I + E + LY +T E L FA IY V
Sbjct: 51 IRPDGGEVRYFGKDFDEEMKRI---IGYLPEID-ALYDNMTVSEYLNLFADIYDV----- 101
Query: 124 EERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQSAI 183
I LL + L D + + S+GM+++++IA+ L++DPEVL DEPT GLD +++
Sbjct: 102 RADIDGLLERLNL---PDKYISDLSKGMRRKVSIARTLLHDPEVLVYDEPTGGLDPTTSL 158
Query: 184 FVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRIIALDTPEGLKKLVRKDTI 243
+ EL+++L E K ++ + H M+ E + D++ ++ G+ + + L++L+ ++TI
Sbjct: 159 SIAELLRELA-ERGKIIVFSAHNMYYVERIADKVVVMKGGKALYFGS---LEELIGQNTI 214
Query: 244 VEVRVKNYNGENPFGLAKIKEEGEKVVLRGPLDEEDIPKLVEFLVKNNAKVLSVEVKEPT 303
+V I E V L + E++ E + K K++ +E + P
Sbjct: 215 YKVEY------------TIDGRKESVKL---FEVEELLDFAEKVRKQGGKIIEIEREVPR 259
Query: 304 LEDVFIKLTGR 314
LE+V+ L GR
Sbjct: 260 LENVYFSLIGR 270
>pir||F75377 ABC transporter, ATP-binding protein - Deinococcus radiodurans
(strain R1) >gi|6459346|gb|AAF11143.1|AE002002_1
(AE002002) ABC transporter, ATP-binding protein
[Deinococcus radiodurans]
Length = 346
Score = 153 bits (383), Expect = 2e-36
Identities = 85/234 (36%), Positives = 135/234 (57%), Gaps = 10/234 (4%)
Query: 3 AIEVKNLRKLYP--KKIP--------LPFRKIEWFEALKGITFNVKKGELFGLLGPNGAG 52
A+ V++L+K Y +K P RK +A+K ++F++ GE+ G LGPNGAG
Sbjct: 9 AVHVRDLKKQYAVHEKDPGLAGSLRAFVSRKTRLVDAVKSVSFDLAPGEVVGFLGPNGAG 68
Query: 53 KTTTIKILTTLLEPTSGEARVLGFDIVKEAREIRKRINLVAEGERTLYWRLTAYENLRYF 112
KTTT+K+L+ LL P+ G VLGF+ + RE +++ LV ++ L W L A ++
Sbjct: 69 KTTTLKMLSGLLHPSGGSVEVLGFEPRRRQREYLRQMTLVMGQKQQLIWDLPALDSFLVN 128
Query: 113 ASIYYVPKKVAEERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDE 172
+IY +P +R ++GL V S G + + +A AL++ P++LFLDE
Sbjct: 129 QAIYEIPDAQYHATMREFTEVLGLEGILKKQVRKLSLGERMKCELAAALLHRPKILFLDE 188
Query: 173 PTLGLDVQSAIFVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRII 226
PT+GLDV VRE +++ +E+ TV+LT+HYM + L RI +ID G+++
Sbjct: 189 PTIGLDVNMQEAVREFVREYNRKEQATVMLTSHYMADVTALARRILVIDAGQLV 242
>emb|CAB94554.1| (AL359152) putative ABC transporter, ATP-binding subunit
[Streptomyces coelicolor A3(2)]
Length = 260
Score = 153 bits (383), Expect = 2e-36
Identities = 87/208 (41%), Positives = 123/208 (58%), Gaps = 1/208 (0%)
Query: 28 EALKGITFNVKKGELFGLLGPNGAGKTTTIKILTTLLEPTSGEARVLGFDIVKEAREIRK 87
EA++GI V++GE+ G LGPNGAGKTTT+++LTTLL PT G A V G D+ + +R
Sbjct: 21 EAVRGIDLTVREGEILGFLGPNGAGKTTTLRMLTTLLAPTGGAATVAGHDLATDPAGVRA 80
Query: 88 RINLVAEGERTLYWRLTAYENLRYFASIYYVPKKVAEERIRNLLHMVGLWDRKDDLVMNY 147
VA+ + ++T E L +Y + + A ER L +GL D
Sbjct: 81 ACGYVAQSGG-VDPQITVREELVTQGRLYRLSRARAAERAGELARDLGLTGLLDRRCGAL 139
Query: 148 SRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQSAIFVRELIKKLVEEEKKTVLLTTHYM 207
S G ++RL IA AL + P+VLFLDEPT GLD S + +L+++L + TV LTTHY+
Sbjct: 140 SGGQRRRLDIAMALTHRPKVLFLDEPTTGLDPGSRADLWDLVRRLRDAHGTTVFLTTHYL 199
Query: 208 HEAEELCDRIAIIDHGRIIALDTPEGLK 235
EA+ L DR+ ++D G ++A TP LK
Sbjct: 200 DEADALSDRLVVVDGGTVVAEGTPAALK 227
>sp|P23703|NODI_RHILO NODULATION ATP-BINDING PROTEIN I >gi|95215|pir||S13590 nodulation
protein nodI - Rhizobium meliloti
>gi|581510|emb|CAA39236.1| (X55705) nodulation gene;
integral membrane protein; homology to Rhizobium
leguminosarum nodI [Mesorhizobium loti]
Length = 339
Score = 153 bits (382), Expect = 3e-36
Identities = 100/288 (34%), Positives = 159/288 (54%), Gaps = 9/288 (3%)
Query: 33 ITFNVKKGELFGLLGPNGAGKTTTIKILTTLLEPTSGEARVLGFDIVKEAREIRKRINLV 92
++F+V GE FGLLGPNGAGK+T ++L + P +G VLG + AR R+ I +V
Sbjct: 59 LSFSVASGECFGLLGPNGAGKSTIARMLLGMTCPDAGAITVLGVPVPARARLARRGIGVV 118
Query: 93 AEGERTLYWRLTAYENLRYFASIYYVPKKVAEERIRNLLHMVGLWDRKDDLVMNYSRGMK 152
+ + L LT ENL F + + + +E I +LL L + + V S GMK
Sbjct: 119 PQFDN-LDQELTVRENLLVFGRYFGMSTRQSEAVIPSLLEFARLERKANARVSELSGGMK 177
Query: 153 QRLAIAKALINDPEVLFLDEPTLGLDVQSAIFVRELIKKLVEEEKKTVLLTTHYMHEAEE 212
+ L +A+ALINDP+++ +DEPT GLD + + E ++ L+ KT++LTTH+M EAE
Sbjct: 178 RCLTMARALINDPQLIVMDEPTTGLDPHARHLIWERLRALL-ARGKTIILTTHFMEEAER 236
Query: 213 LCDRIAIIDHGRIIALDTPEGLKKLVRKDTIVEVRVKNYNGENPFGLAKIKEEGEKVVLR 272
LCDR+ +++ GR IA P+ L ++E+ Y G+ L+ +K +++ +
Sbjct: 237 LCDRLCVLEKGRNIAEGGPQALIDEHIGCQVMEI----YGGDPHELLSLVKPHSQRIEVS 292
Query: 273 GP--LDEEDIPKLVEFLVKNNAKVLSVEVKEPTLEDVFIKLTGRGLRD 318
G P V ++ A L + ++ LEDVF++LTGR + +
Sbjct: 293 GETLYCYAPDPDQVRTQLQGRAG-LRLLLRPANLEDVFLRLTGREMEE 339
>gb|AAD16030.1| (AF082183) ABC transporter MutF [Streptococcus mutans]
Length = 302
Score = 153 bits (382), Expect = 3e-36
Identities = 98/293 (33%), Positives = 155/293 (52%), Gaps = 19/293 (6%)
Query: 28 EALKGITFNVKKGELFGLLGPNGAGKTTTIKILTTLLEPTSGEARVLGFDIVKEAREIRK 87
+ L + + GE++G LG NGAGK+T +KI+ LL SGE LG + + +I
Sbjct: 19 KVLDHLNMTISPGEIYGFLGVNGAGKSTAMKIILGLLPKDSGEIVALGRPLPENRSQILP 78
Query: 88 RINLVAEGERTLYWRLTAYENLRYFASIYYVPKKVAEERIRNLLHMVGLWDRKDDLVMNY 147
I + E E Y LT +ENL+ + +PK + I+ ++ G++ KD LV NY
Sbjct: 79 EIGALIE-EPAFYPNLTGFENLQLIQELANLPK----DNIKVVMEATGIYYAKDKLVRNY 133
Query: 148 SRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQSAIFVRELIKKLVEEEKKTVLLTTHYM 207
S GMKQRL I+ ALI P+ L LDEPT GLD +R+LI+ L ++ T+L+++H +
Sbjct: 134 SLGMKQRLGISMALIKFPKFLILDEPTNGLDPDGIHQMRQLIRSLPQKFNMTILISSHIL 193
Query: 208 HEAEELCDRIAIIDHGRIIALDTPEGLKKLVRKDTIVEVRVKN--------YNGENPFGL 259
E E L D + II G +I G+ +L+ ++ +++V N + +N G+
Sbjct: 194 SEIENLADTVGIIKDGHLI---YEGGINQLLNQEQKYQLKVNNLEKAAQIIQHYDNKIGI 250
Query: 260 AKIKEEGEKVVLRGPLDEEDIPKLVEFLVKNNAKVLSVEVKEPTLEDVFIKLT 312
K + ++L D +P L+ LV N ++ + + TLE VF+ LT
Sbjct: 251 VK---NDDDILLISLPDCTLVPDLIAQLVYNELQIYEIYGVKKTLESVFLDLT 300
>sp|P26050|NODI_BRAJA NODULATION ATP-BINDING PROTEIN I >gi|281683|pir||S27496 nodI
protein - Bradyrhizobium japonicum
>gi|152117|gb|AAA26229.1| (J03685) nodI gene product
[Bradyrhizobium japonicum]
Length = 306
Score = 152 bits (381), Expect = 4e-36
Identities = 109/328 (33%), Positives = 162/328 (49%), Gaps = 48/328 (14%)
Query: 3 AIEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKILTT 62
AI++ +RK + K+ + ++F+V +GE FGLLGPNGAGK+T ++L
Sbjct: 7 AIDLVGVRKSFGDKV-----------IVNDLSFSVARGECFGLLGPNGAGKSTIARMLLG 55
Query: 63 LLEPTSGEARVLGFDIVKEAREIRKRINLVAEGERTLYWRLTAYENLRYFASIYYVPKKV 122
++ P G+ VL + AR R + +V + + L T ENL F + + +
Sbjct: 56 MISPDRGKITVLDEPVPSRARAARVAVGVVPQFDN-LEPEFTVRENLLVFGRYFGMSART 114
Query: 123 AEERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQSA 182
E + +LL L + D V S GMK+RL +A+ALINDP +L +DEPT GLD +
Sbjct: 115 IEAVVPSLLEFARLESKADVRVSLLSGGMKRRLTLARALINDPHLLVMDEPTTGLDPHAR 174
Query: 183 IFVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRIIALDTPEGLKKLVRKDT 242
+ E ++ L+ KT+LLTTH+M EAE LCDR+ +++ G IA P+ L
Sbjct: 175 HLIWERLRALL-ARGKTILLTTHFMEEAERLCDRLCVLESGCKIAEGKPDALIDEHIGCN 233
Query: 243 IVEV----------------RVKNYNGENPFGLAKIKEEGEKVVLRGPLDEEDIPKLVEF 286
++E+ R +GE F A+ +E V LRG D
Sbjct: 234 VIEIYGGDLDQLRELIRPYARHIEVSGETLFCYARCPDE-ISVHLRGRTD---------- 282
Query: 287 LVKNNAKVLSVEVKEPTLEDVFIKLTGR 314
L V + P LEDVF++LTGR
Sbjct: 283 --------LRVLQRPPNLEDVFLRLTGR 302
>prf||1914270A nodulation protein [Bradyrhizobium japonicum]
Length = 306
Score = 152 bits (381), Expect = 4e-36
Identities = 106/320 (33%), Positives = 165/320 (51%), Gaps = 32/320 (10%)
Query: 3 AIEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKILTT 62
AI++ +RK + K+ + ++F+V +GE FGLLGPNGAGK+T ++L
Sbjct: 7 AIDLVGVRKSFGDKV-----------IVNDLSFSVARGECFGLLGPNGAGKSTIARMLLG 55
Query: 63 LLEPTSGEARVLGFDIVKEAREIRKRINLVAEGERTLYWRLTAYENLRYFASIYYVPKKV 122
++ P G+ VL + AR R + +V + + L T ENL F + + +
Sbjct: 56 MISPDRGKITVLDEPVPSRARAARVAVGVVPQFDN-LEPEFTVRENLLVFGRYFGMSART 114
Query: 123 AEERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQSA 182
E + +LL L + D V S GMK+RL +A+ALINDP +L +DEPT GLD +
Sbjct: 115 IEAVVPSLLEFARLESKADVRVSLLSGGMKRRLTLARALINDPHLLVMDEPTTGLDPHAR 174
Query: 183 IFVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRIIALDTPEGLKKLVRKDT 242
+ E ++ L+ KT+LLTTH+M EAE LCDR+ +++ G IA P+ L
Sbjct: 175 HLIWERLRALL-ARGKTILLTTHFMEEAERLCDRLCVLESGCKIAEGKPDALIDEHIGCN 233
Query: 243 IVEVRVKNYNGE--------NPFGLAKIKEEGEKVVLRGPLDEEDIPKLVEFLVKNNAKV 294
++E+ Y G+ P+ +I+ GE + +E V + + +V
Sbjct: 234 VIEI----YGGDLDQLRELIRPYA-HRIEVSGETLFCYARCPDE---ISVHLRGRTDLRV 285
Query: 295 LSVEVKEPTLEDVFIKLTGR 314
L + P LEDVF++LTGR
Sbjct: 286 LQ---RPPNLEDVFLRLTGR 302
>pir||E70871 hypothetical protein Rv1458c - Mycobacterium tuberculosis (strain
H37RV) >gi|2791392|emb|CAA15988.1| (AL021184)
hypothetical protein Rv1458c [Mycobacterium
tuberculosis]
Length = 313
Score = 151 bits (378), Expect = 9e-36
Identities = 100/294 (34%), Positives = 152/294 (51%), Gaps = 12/294 (4%)
Query: 29 ALKGITFNVKKGELFGLLGPNGAGKTTTIKILTTLLEPTSGEARVLGFDIVKEAREIRKR 88
A+ + +V E+ LLGPNGAGKTTT+++ + P +G VLG D + + +R R
Sbjct: 26 AVSNLDLDVHDAEVMALLGPNGAGKTTTVEMCEGFVRPDAGSIEVLGLDPITDNARLRAR 85
Query: 89 INLVAEGERTLYWRLTAYENLRYFASIYYVPKKVAEERIRNLLHMVGLWDRKDDLVMNYS 148
I ++ +G Y A E L AS P LL +GL + S
Sbjct: 86 IGVMLQGGGG-YPAARAGEMLDLVASYAANPLDP-----HWLLDTLGLTEAARTTYRRLS 139
Query: 149 RGMKQRLAIAKALINDPEVLFLDEPTLGLDVQSAIFVRELIKKLVEEEKKTVLLTTHYMH 208
G +QRLA+A AL+ P+++FLDEPT G+D + + V ELI L + TV+LTTH++
Sbjct: 140 GGQQQRLALACALVGRPQLVFLDEPTAGMDAHARVLVWELIDAL-RRDGVTVVLTTHHLK 198
Query: 209 EAEELCDRIAIIDHGRIIALDTPEGLKKLVRKDTI-----VEVRVKNYNGENPFGLAKIK 263
EAEEL DR+ IIDHG +A TP L + KD + + + P G +
Sbjct: 199 EAEELADRLVIIDHGVTVAAGTPAELMRSGAKDQLRFTAPPRLDLSLLASALPEGYQATE 258
Query: 264 EEGEKVVLRGPLDEEDIPKLVEFLVKNNAKVLSVEVKEPTLEDVFIKLTGRGLR 317
+ ++ GP+D + + + + + + + V++ +LEDVF+ LTGR LR
Sbjct: 259 LTPGEYLVEGPVDPQVLATVTAWCAQIDVLATDMRVEQRSLEDVFLDLTGRKLR 312
>pir||H75288 ABC transporter, ATP-binding protein - Deinococcus radiodurans
(strain R1) >gi|6460124|gb|AAF11860.1|AE002063_3
(AE002063) ABC transporter, ATP-binding protein
[Deinococcus radiodurans]
Length = 327
Score = 151 bits (378), Expect = 9e-36
Identities = 103/316 (32%), Positives = 163/316 (50%), Gaps = 26/316 (8%)
Query: 4 IEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKILTTL 63
IE + LRK+Y + + G+T V GE+FG LGPNGAGK+TT+K+L L
Sbjct: 16 IETRELRKVYRDRA-----------VVDGLTLTVGAGEVFGFLGPNGAGKSTTVKMLLGL 64
Query: 64 LEPTSGEARVLGFDIVKEAREIRKRINLVAEGERTLYWRLTAYENLRYFASIYYVPKKVA 123
+ P+ GEARVL A +R R+ + E R W +TA E L + + +
Sbjct: 65 VIPSGGEARVLCGSPADPA--VRARLGFLPEQFRFQLW-MTAEEFLNFHGQLAGMKSNEL 121
Query: 124 EERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQSAI 183
R+ +L VGL R + + YS+GM QR +A A++ P+++FLDEPT LD +
Sbjct: 122 RTRVPQVLEEVGLGGRGGEQLSGYSKGMLQRCGLAGAILARPQLVFLDEPTSALDPIGRV 181
Query: 184 FVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRIIALDTPEGLKKLVRKDTI 243
VRE+I++L + E V L +H + E E++CDR+A + GR++ + +++L+
Sbjct: 182 EVREIIERL-KGEGVAVFLNSHLLSEVEQVCDRVAFVKAGRVLQQGS---MRELMGGVIP 237
Query: 244 VEVRVKNYNGENPF---GLAKIKEEGEKVVLRGPLD-----EEDIPKLVEFLVKNNAKVL 295
V VRV E G+ +I E R LD E +P + + A++
Sbjct: 238 VSVRVDRLTSELRAALQGIGEIHREDTNTPGRADLDLWLQSEAQVPAVAAAIHAAGAQLY 297
Query: 296 SVEVKEPTLEDVFIKL 311
++ + P LE +F++L
Sbjct: 298 ALTPRRPDLESLFLEL 313
>pir||T18288 ABC transport protein - slime mold (Dictyostelium discoideum)
(fragment) >gi|1513298|gb|AAB06789.1| (U66526) AbcA
[Dictyostelium discoideum]
Length = 1336
Score = 150 bits (375), Expect = 2e-35
Identities = 80/203 (39%), Positives = 127/203 (62%), Gaps = 3/203 (1%)
Query: 21 FRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKILTTLLEPTSGEARVLGFDIVK 80
FR + A+K ++ +V+KG + G LG NG GK+TTI +LT LLEPT+G+A V G ++
Sbjct: 392 FRPKKTVHAVKYLSLSVEKGTILGFLGSNGCGKSTTIGMLTGLLEPTAGDALVYGHSVIS 451
Query: 81 EAREIRKRINLVAEGERTLYWRLTAYENLRYFASIYYVPKKVAEERIRNLLHMVGLWDRK 140
+R RI V L+ +TA E+L+ F+ + +P + E +I+ +L V L
Sbjct: 452 NIAAVR-RITSVVPQHDILWAEMTAREHLQLFSELKGIPAQERESQIQKVLDQVRLSKIS 510
Query: 141 DDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQSAIFVRELIKKLVEEEKKTV 200
++L+ YS GMK+RL++A A I DP+++F+DEPT G+D S + +L+K + + K +
Sbjct: 511 NNLISTYSGGMKRRLSVAIACIGDPKIIFMDEPTTGVDPSSKRHLIDLVKSI--KNDKVI 568
Query: 201 LLTTHYMHEAEELCDRIAIIDHG 223
+LT+H MHE E L D+I I++ G
Sbjct: 569 ILTSHDMHEVEILADKIVIMNEG 591
>pir||G75548 ABC transporter, ATP-binding protein - Deinococcus radiodurans
(strain R1) >gi|6457873|gb|AAF09790.1|AE001882_8
(AE001882) ABC transporter, ATP-binding protein
[Deinococcus radiodurans]
Length = 354
Score = 150 bits (374), Expect = 3e-35
Identities = 88/223 (39%), Positives = 126/223 (56%), Gaps = 11/223 (4%)
Query: 4 IEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKILTTL 63
IEV++L K + +K A++ I+F++ GE+ G LGPNGAGK+TTIK+LT L
Sbjct: 47 IEVRHLCKSFARK-----------PAVQDISFSIPAGEIVGYLGPNGAGKSTTIKVLTGL 95
Query: 64 LEPTSGEARVLGFDIVKEAREIRKRINLVAEGERTLYWRLTAYENLRYFASIYYVPKKVA 123
L P SGE RV G K+ R+ R+ V TL+W L E+L +Y VP
Sbjct: 96 LVPDSGEVRVGGLVPWKQRRQHVARLGAVFGQRTTLWWDLPVRESLELLRHVYRVPAARF 155
Query: 124 EERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQSAI 183
E + ++ L + S G + R +A AL++DPE+LFLDEPT+GLDV +
Sbjct: 156 AENLAGFTELLELGPFLNTPARALSLGQRMRADLAAALLHDPELLFLDEPTVGLDVVAKE 215
Query: 184 FVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRII 226
+RE +K + E TVLLTTH + + E L R+ +ID GR++
Sbjct: 216 RIREFVKAVNAERGVTVLLTTHDLGDVERLARRVMMIDTGRLL 258
>dbj|BAB10070.1| (AB010069) contains similarity to ABC transporter~gene_id:K11J9.23
[Arabidopsis thaliana]
Length = 917
Score = 148 bits (371), Expect = 6e-35
Identities = 103/321 (32%), Positives = 169/321 (52%), Gaps = 20/321 (6%)
Query: 3 AIEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKILTT 62
AI NL+K+YP + P + A++G+ +V GE FG+LGPNGAGKT+ I ++T
Sbjct: 594 AILCDNLKKVYPGRDGNPPKM-----AVRGLYLSVSSGECFGMLGPNGAGKTSFISMMTG 648
Query: 63 LLEPTSGEARVLGFDIVKEAREIRKRINLVAEGERTLYWRLTAYENLRYFASIYYVPKKV 122
LL+P+SG A V G DI K+ ++ + + + + L+ LT E+L ++ + +
Sbjct: 649 LLKPSSGTALVQGLDICKDMNKVYTSMGVCPQHD-LLWETLTGREHLLFYGRLKNIKGSD 707
Query: 123 AEERIRNLLHMVGLWDR--KDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQ 180
+ + L V L+D D NYS GMK+RL++A +LI +P+V++LDEP+ GLD
Sbjct: 708 LTQAVEESLKSVSLYDGGVGDKPAGNYSGGMKRRLSVAISLIGNPKVVYLDEPSTGLDPA 767
Query: 181 SAIFVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRIIALDTPEGLKKLVRK 240
S + +IK+ ++ ++LTTH M EAE LCDR+ I G + + + LK
Sbjct: 768 SRKNLWNVIKR--AKQNTAIILTTHSMEEAEFLCDRLGIFVDGGLQCIGNSKELKSRYGG 825
Query: 241 DTIVEVRVKNYNGENPFGLAK-IKEEGEKVVLRGPLDEEDIPK----LVEFL-----VKN 290
+ + + + E L + + +K+ + ++PK + E K
Sbjct: 826 SYVFTMTTSSKHEEEVERLVESVSPNAKKIYHLAGTQKFELPKQEVRIAEVFRAVEKAKA 885
Query: 291 NAKVLSVEVKEPTLEDVFIKL 311
N V + + + TLEDVFIK+
Sbjct: 886 NFTVFAWGLADTTLEDVFIKV 906
>pir||A39025 probable membrane protein, cpn60 5'-region - Synechocystis sp. (PCC
6803) >gi|154464|gb|AAA27283.1| (M57517) chaperonin 60
[Synechocystis sp.]
Length = 354
Score = 148 bits (370), Expect = 8e-35
Identities = 105/292 (35%), Positives = 159/292 (53%), Gaps = 12/292 (4%)
Query: 28 EALKGITFNVKKGELFGLLGPNGAGKTTTIKILTTLLEPTSGEARVLGFDIVKEAREIRK 87
E+LK ++ V++GE FGLLGPNGAGKTT +KIL ++ + G +LG I R+ ++
Sbjct: 68 ESLKPLSIAVQQGETFGLLGPNGAGKTTLLKILLGVIRASGGRGTLLGKPI--GDRQTKQ 125
Query: 88 RINLVAEGERTLYWRLTAYENLRYFASIYYVPKKVAEERIRNLLHMVGLWDR--KDDLVM 145
R+ + E Y LTA+E L Y S++ + K+ + RI + +VGL + K +
Sbjct: 126 RVGYLPE-NAYFYDFLTAWEFLDYIGSLFQIGKQERQRRILAMCDLVGLAQKTAKKKQLR 184
Query: 146 NYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQSAIFVRELIKKLVEEEKKTVLLTTH 205
YS+GM QR+ +A+ALINDPEV+FLDEP GLD A +L K T
Sbjct: 185 QYSKGMLQRVGMAQALINDPEVVFLDEPMSGLDPWGATKCGKLFFP-SRNRAKPSFSTPT 243
Query: 206 YMHEAEELCDRIAIIDHGRIIALDTPEGLKKLVRKDTIVEVRVKNYNGENPFGLAKIKEE 265
+ E++CDRIAI+ G ++ + L +++ D EV +K E G
Sbjct: 244 FWRTLEQICDRIAILARGELLCSGS---LAEVLGNDEGYEVVLKG-GEEEALGKYLANLS 299
Query: 266 GEKVVLRGPLDEEDIPKLVEFLVKNNAKVLSVEVKEPTLEDVFIK-LTGRGL 316
E+ V G + D+ LV+ L NA+++S+ + P+LED FI+ L RG+
Sbjct: 300 QEQDVWHGHY-QGDVQALVDALPSLNARLISMNLARPSLEDYFIRQLRERGI 350
>pir||A70082 ABC transporter (ATP-binding protein) homolog yxlF - Bacillus
subtilis >gi|1783260|dbj|BAA11737.1| (D83026) homologous
to many ATP-binding transport proteins; hypothetical
[Bacillus subtilis] >gi|2636401|emb|CAB15892.1| (Z99123)
similar to ABC transporter (ATP-binding protein)
[Bacillus subtilis]
Length = 295
Score = 147 bits (367), Expect = 2e-34
Identities = 93/287 (32%), Positives = 158/287 (54%), Gaps = 12/287 (4%)
Query: 28 EALKGITFNVKKGELFGLLGPNGAGKTTTIKILTTLLEPTSGEARVLGFDIVKEAREIRK 87
EA+K ++F+V + E LLGPNGAGKTTT+++L LL PTSG ++LG E + R+
Sbjct: 15 EAVKNVSFHVNENECVALLGPNGAGKTTTLQMLAGLLSPTSGTIKLLG-----EKKLDRR 69
Query: 88 RINLVAEGERTLYWRLTAYENLRYFASIYYVPKKVAEERIRNLLHMVGLWDRKDDLVMNY 147
I + + W +TA E L + + + K+ +E+I +L VGL + + Y
Sbjct: 70 LIGYLPQYPAFYSW-MTANEFLTFAGRLSGLSKRKCQEKIGEMLEFVGLHEAAHKRIGGY 128
Query: 148 SRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQSAIFVRELIKKLVEEEKKTVLLTTHYM 207
S GMKQRL +A+AL++ P+ L LDEP LD V +++++L ++ VL +TH +
Sbjct: 129 SGGMKQRLGLAQALLHKPKFLILDEPVSALDPTGRFEVLDMMREL--KKHMAVLFSTHVL 186
Query: 208 HEAEELCDRIAIIDHGRIIALDTPEGLKKLVRKDTI---VEVRVKNYNGENPFGLAKIKE 264
H+AE++CD++ I+ +G I + LK+ + + V+ +++ + E P+ A + +
Sbjct: 187 HDAEQVCDQVVIMKNGEISWKGELQELKQQQQTNVFTLSVKEKLEGWLEEKPYVSAIVYK 246
Query: 265 EGEKVVLRGPLDEEDIPKLVEFLVKNNAKVLSVEVKEPTLEDVFIKL 311
+ V P D L+ ++ V E K +LEDV++K+
Sbjct: 247 NPSQAVFELP-DIHAGRSLLSDCIRKGLTVTRFEQKTESLEDVYLKV 292
>gb|AAG20473.1| (AE005119) copper transport ATP-binding protein; NosF1
[Halobacterium sp. NRC-1]
Length = 304
Score = 147 bits (367), Expect = 2e-34
Identities = 101/321 (31%), Positives = 165/321 (50%), Gaps = 32/321 (9%)
Query: 1 MKAIEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKIL 60
M AIE+ + K Y AL + V +GE++G LGPNGAGK+T I IL
Sbjct: 1 MPAIELSGVSKRYGD-----------VTALTDLNITVDEGEIYGFLGPNGAGKSTAINIL 49
Query: 61 TTLLEPTSGEARVLGFDIVKEAREIRKRINLVAEGERTLYWRLTAYENLRYFASIYYVPK 120
+ PT+G A +LG+D +++ IR+RI ++ EG ++Y RLTA +++ + +
Sbjct: 50 LDFVRPTTGSATILGYDAQADSQAIRQRIGVLPEG-FSVYDRLTARKHVE-----FAIDS 103
Query: 121 KVAEERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQ 180
K A LL VG+ + D +S GM+QRL +A AL+ DPE+L LDEP+ GLD
Sbjct: 104 KNATNDPDALLDRVGIPEAADRKAGGFSTGMRQRLGLAIALVGDPEMLLLDEPSSGLDPN 163
Query: 181 SAIFVRELIKKLVEEEKK--TVLLTTHYMHEAEELCDRIAIIDHGRIIALDTPEGLKKLV 238
A RE+ L EE + TV ++H + + E +CD I+ +G ++A D+ + L++
Sbjct: 164 GA---REMRSILTEEANRGTTVFFSSHILGQVEAICDHAGILQNGTLVAEDSIDALREAT 220
Query: 239 RKDTIVEVRVKNYNGENPF------GLAKIKEEGEKVVLR-GPLDEEDIPKLVEFLVKNN 291
T + V + + G++++ + +V+R G + D+ +E
Sbjct: 221 DATTTLTVTLDAVTDDAVAAANAIPGVSEVSVDASDLVVRTGDASKTDVLDAIE---STG 277
Query: 292 AKVLSVEVKEPTLEDVFIKLT 312
A V ++ +L+DVF T
Sbjct: 278 ATVQDFATEDASLDDVFSAYT 298
>gb|AAA21451.1| (U01058) ABC family transporter [Entamoeba histolytica]
Length = 808
Score = 146 bits (365), Expect = 3e-34
Identities = 100/291 (34%), Positives = 161/291 (54%), Gaps = 31/291 (10%)
Query: 41 ELFGLLGPNGAGKTTTIKILTTLLEPTSGEARVLGFDIVKEAREIRKRINLVAEGERTLY 100
E FGLLG NGAGKTTTI +LT L+EP G A V G++I ++ + + + + L+
Sbjct: 518 ETFGLLGQNGAGKTTTISMLTGLIEPNGGSATVCGYNIHNSMEDVHTVVGVCPQFD-VLW 576
Query: 101 WRLTAYENLRYFASI---YYVPKKVAEERIRNLLHMVGLWDRKDDLVMN-----YSRGMK 152
LT YE + ++ + + K VA +++L VGLW KD N S GM+
Sbjct: 577 PDLTTYEIILFYCRLKGHFLKSKSVA----KHILEDVGLWSDKDPKPQNRRSSQLSGGMR 632
Query: 153 QRLAIAKALINDPEVLFLDEPTLGLDVQSAIFVRELIKKLVEEEKKTVLLTTHYMHEAEE 212
+RL+IA A+ +P+V+FLDEPT GLDV V +LI K+ + + +++TTH M EA+
Sbjct: 633 RRLSIAIAMTGNPKVIFLDEPTTGLDVAIRRDVWDLILKI--QRNRCIIITTHSMEEADV 690
Query: 213 LCDRIAIIDHGRIIALDTPEGLK---------KLVRKDTI-VEVRVKNYNGENPFGLAKI 262
LCDR+ I+ G +IAL T + ++ K+ ++ I V +K GE+ ++
Sbjct: 691 LCDRVGIMSDGDLIALGTCQRIRNHYAPGYYIKIASEERIEVTNFLKQLLGED----VEV 746
Query: 263 KEEGEKVVLRGPLDEEDIPKLVEFLV--KNNAKVLSVEVKEPTLEDVFIKL 311
KEE + P+D++ + + ++ K K+ E+++ LED FI++
Sbjct: 747 KEERGILTAMIPIDKKRLSNIFSEVLEHKEELKIEDWEIQQKGLEDAFIEI 797
>pir||T07717 probable ABC-type transport protein T23J7.110 - Arabidopsis
thaliana >gi|4741195|emb|CAB41861.1| (AL049746) ABC
transporter-like protein [Arabidopsis thaliana]
Length = 900
Score = 146 bits (364), Expect = 4e-34
Identities = 104/326 (31%), Positives = 169/326 (50%), Gaps = 22/326 (6%)
Query: 3 AIEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKILTT 62
AI NL+K+YP + P + A++G++ V GE FG+LGPNGAGKT+ I ++T
Sbjct: 577 AIVCDNLKKVYPGRDGNPPKL-----AVRGLSLAVPSGECFGMLGPNGAGKTSFINMMTG 631
Query: 63 LLEPTSGEARVLGFDIVKEAREIRKRINLVAEGERTLYWRLTAYENLRYFASIYYVPKKV 122
LL+PTSG A V G DI + + + + + + L+ LT E+L ++ + +
Sbjct: 632 LLKPTSGTALVQGLDICNDMDRVYTSMGVCPQHD-LLWETLTGREHLLFYGRLKNLKGAD 690
Query: 123 AEERIRNLLHMVGLWDR--KDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQ 180
+ + L V L+ D YS GMK+RL++A +LI +P+V+++DEP+ GLD
Sbjct: 691 LNQAVEESLKSVNLFHGGVADKPAGKYSGGMKRRLSVAISLIGNPKVVYMDEPSTGLDPA 750
Query: 181 SAIFVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRIIALDTPEGLKKLVRK 240
S + +IK+ ++ ++LTTH M EAE LCDR+ I G + + P+ LK
Sbjct: 751 SRKNLWTVIKR--AKQNTAIILTTHSMEEAEFLCDRLGIFVDGGLQCIGNPKELKGRYGG 808
Query: 241 DTIVEVRVKNYNGENPFGLAK-IKEEGEKVVLRGPLDEEDIPK----------LVEFLVK 289
+ + + + +N L K + +K+ + ++PK VE K
Sbjct: 809 SYVFTMTTSSEHEQNVEKLIKDVSPNAKKIYHIAGTQKFELPKEEVRISEVFQAVE-KAK 867
Query: 290 NNAKVLSVEVKEPTLEDVFIKLTGRG 315
+N V + + + TLEDVFIK+ G
Sbjct: 868 SNFTVFAWGLADTTLEDVFIKVVRNG 893
>dbj|BAB10074.1| (AB010069) contains similarity to ABC transporter~gene_id:MAC9.5
[Arabidopsis thaliana]
Length = 907
Score = 146 bits (364), Expect = 4e-34
Identities = 104/322 (32%), Positives = 168/322 (51%), Gaps = 22/322 (6%)
Query: 3 AIEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKILTT 62
AI NL+K+YP P + A++G+ +V GE FG+LGPNGAGKT+ I ++T
Sbjct: 584 AIVCDNLKKVYPGSDGNPPKL-----AVRGLYLDVPSGECFGMLGPNGAGKTSFINMMTG 638
Query: 63 LLEPTSGEARVLGFDIVKEAREIRKRINLVAEGERTLYWRLTAYENLRYFASIYYVPKKV 122
LL+PTSG A V G DI K+ ++ + + + + L+ LT E+L ++ + +
Sbjct: 639 LLKPTSGTALVQGLDICKDMNKVYTSMGVCPQHD-LLWGTLTGREHLLFYGRLKNIKGSA 697
Query: 123 AEERIRNLLHMVGLWDR--KDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQ 180
+ + L V L+D D YS GMK+RL++A +LI +P+V+++DEP+ GLD
Sbjct: 698 LMQAVEESLKSVSLFDGGVADKPAGKYSGGMKRRLSVAISLIGNPKVVYMDEPSTGLDPA 757
Query: 181 SAIFVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRIIALDTPEGLKKLVRK 240
S + +I++ ++ ++LTTH M EAE LCDR+ I G + + P+ LK
Sbjct: 758 SRKDLWTVIQR--AKQNTAIILTTHSMEEAEFLCDRLGIFVDGGLQCVGNPKELKGRYGG 815
Query: 241 DTIVEVRVKNYNGENPFGLAK-IKEEGEKVVLRGPLDEEDIPK----------LVEFLVK 289
+ + + E + K I ++V + +IPK +VE VK
Sbjct: 816 SYVFTMTTSVEHEEKVERMVKHISPNSKRVYHLAGTQKFEIPKQEVMIADVFFMVE-KVK 874
Query: 290 NNAKVLSVEVKEPTLEDVFIKL 311
+ V + + + TLEDVF K+
Sbjct: 875 SKFTVFAWGLADTTLEDVFFKV 896
>pir||C75593 probable ABC transporter, ATP-binding protein - Deinococcus
radiodurans (strain R1)
>gi|6460585|gb|AAF12291.1|AE001862_117 (AE001862) ABC
transporter, ATP-binding protein, putative [Deinococcus
radiodurans]
Length = 301
Score = 145 bits (362), Expect = 7e-34
Identities = 103/287 (35%), Positives = 148/287 (50%), Gaps = 15/287 (5%)
Query: 29 ALKGITFNVKKGELFGLLGPNGAGKTTTIKILTTLLEPTSGEARVLGFDIVKEAREIRKR 88
AL ++ GEL LLGPNGAGK+T I +L L P++G+ RVLG D ++R R
Sbjct: 17 ALSDFNLTLRTGELTALLGPNGAGKSTAIGLLLGLSAPSAGQVRVLGAD--PRRNDVRAR 74
Query: 89 INLVAEGERTLYWRLTAYENLRYFASIYYVPKKVAEERIRNLLHMVGLWDRKDDLVMNYS 148
I + + E L LT E + FAS Y P V E L + L S
Sbjct: 75 IGAMPQ-ESALPAGLTVREAVTLFASFYPAPLGVDEA-----LALADLGPVAGRRAAQLS 128
Query: 149 RGMKQRLAIAKALINDPEVLFLDEPTLGLDVQSAIFVRELIKKLVEEEKKTVLLTTHYMH 208
G K+RLA A A++ DPE+L +DEPT G+D QS E + L +T+LLTTHY+
Sbjct: 129 GGQKRRLAFALAVVGDPELLLIDEPTTGMDAQSRAAFWEAVTGL-RARGRTILLTTHYLE 187
Query: 209 EAEELCDRIAIIDHGRIIALDTPEGLKKLV--RKDTIVEVRVKNYNGENPFGLAKIKEEG 266
EAE DR+ +++ GRI+A DTP+GL+ V + + V V+ P A +
Sbjct: 188 EAERTADRVVVMNGGRILADDTPQGLRSGVGGARVSFVSDLVQAELERLPGVSAVQVDAA 247
Query: 267 EKVVLRGPLDEEDIPKLVEFLVKNNAKVLSVEVKEPTLEDVFIKLTG 313
+ LR + E L+ L+ + +EV+ TLE+ +++LTG
Sbjct: 248 GRADLRTSVPE----ALLAALIGSGTTFSDLEVRRATLEEAYLQLTG 290
>pir||G82707 ABC transporter ATP-binding protein XF1223 [imported] - Xylella
fastidiosa (strain 9a5c)
>gi|9106199|gb|AAF84033.1|AE003956_3 (AE003956) ABC
transporter ATP-binding protein [Xylella fastidiosa]
Length = 310
Score = 145 bits (362), Expect = 7e-34
Identities = 103/315 (32%), Positives = 160/315 (50%), Gaps = 21/315 (6%)
Query: 3 AIEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKILTT 62
A+ V NL K Y +ALKGI+ ++ G+ F LLGPNGAGK+T I I+++
Sbjct: 10 ALHVYNLHKTYSNGT----------QALKGISLDITPGDFFALLGPNGAGKSTLISIVSS 59
Query: 63 LLEPTSGEARVLGFDIVKEAREIRKRINLVAEGERTLYWRLTAYENLRYFASIYYVPKKV 122
L+ +SG V G D+V+E + I LV + E + L +A Y +P
Sbjct: 60 LVNLSSGSVEVFGIDLVRERSAAIRLIGLVPQ-EINFNLFEKPLDILINYAGFYGIPYAK 118
Query: 123 AEERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQSA 182
AE L LW++ + S GMK+RL IA+A++ P +L LDEPT G+DV+
Sbjct: 119 AEALAEIELKRAHLWEKAQVMSRTLSGGMKRRLMIARAMMTQPRLLILDEPTAGVDVEIR 178
Query: 183 IFVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRIIALDTPEGLKKLVRKDT 242
+ ++++ + T++LTTHY+ EAE LC +AII+ G+II +G + +
Sbjct: 179 RDMWRVLQE-INANGTTIMLTTHYLEEAESLCRNLAIINGGQII----EKGPMRTLLAKL 233
Query: 243 IVEVRVKNYNGENPFGLAKIKEEGEKVVLRGPLD-----EEDIPKLVEFLVKNNAKVLSV 297
VE + + +G P L I++ + LD D+ + L N +V S+
Sbjct: 234 DVEGFLLDIDGTLPAQLPSIEDTTLNALDDHTLDLSMPRAMDLNHVFAALSAANIQVRSM 293
Query: 298 EVKEPTLEDVFIKLT 312
K LE++FI+LT
Sbjct: 294 RTKSNRLEELFIRLT 308
>pir||T07713 probable ABC-type transport protein T23J7.70 - Arabidopsis thaliana
>gi|4741191|emb|CAB41857.1| (AL049746) ABC
transporter-like protein [Arabidopsis thaliana]
Length = 925
Score = 144 bits (360), Expect = 1e-33
Identities = 103/321 (32%), Positives = 168/321 (52%), Gaps = 20/321 (6%)
Query: 3 AIEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKILTT 62
AI LRK+YP + P +K A++ ++ V GE FG+LGPNGAGKT+ I ++T
Sbjct: 602 AIVCDKLRKVYPGRDGNPPKK-----AVRVLSLAVPSGECFGMLGPNGAGKTSFINMMTG 656
Query: 63 LLEPTSGEARVLGFDIVKEAREIRKRINLVAEGERTLYWRLTAYENLRYFASIYYVPKKV 122
L++PTSG A V G DI K+ + + + + + L+ LT E+L ++ + +
Sbjct: 657 LVKPTSGAAFVQGLDICKDMDRVYTSMGVCPQHD-LLWETLTGREHLLFYGRLKNLKGVD 715
Query: 123 AEERIRNLLHMVGLWDR--KDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQ 180
+ + L V L+ D YS GMK+RL++A +LI +P+V+++DEP+ GLD
Sbjct: 716 LNQAVEESLRSVNLFHGGVADKPAGKYSGGMKRRLSVAISLIGNPKVVYMDEPSTGLDPA 775
Query: 181 SAIFVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRIIALDTPEGLKKLVRK 240
S + +IK + ++LTTH M EAE LCDR+ I GR+ + P+ LK
Sbjct: 776 SRKNLWTVIKN--AKRHTAIILTTHSMEEAEFLCDRLGIFVDGRLQCIGNPKELKGRYGG 833
Query: 241 DTIVEVRVKNYNGENPFGLAKIKEEGEKVV--------LRGPLDEEDIPKLVEFL--VKN 290
++ + + + ++ L + K + P DE I ++ + + K+
Sbjct: 834 SYVLTMTTSSEHEKDVEMLVQEVSPNVKKIYHIAGTQKFEIPKDEVRISEVFQVVEKAKS 893
Query: 291 NAKVLSVEVKEPTLEDVFIKL 311
N KV + + + TLEDVFIK+
Sbjct: 894 NFKVFAWGLADTTLEDVFIKV 914
>emb|CAC11986.1| (AL445065) ABC transporter cdd4-like protein ScnF related protein
[Thermoplasma acidophilum]
Length = 297
Score = 144 bits (360), Expect = 1e-33
Identities = 96/275 (34%), Positives = 147/275 (52%), Gaps = 26/275 (9%)
Query: 1 MKAIEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKIL 60
M I V N+ K Y + AL ++FNV LLGPNGAGKTT +KI+
Sbjct: 1 MMGISVSNVSKRYGDLM-----------ALNRVSFNVNGTGCLVLLGPNGAGKTTLMKIM 49
Query: 61 TTLLEPTSGEARVLGFDIVKEAREIRKRINLVAEGERTLYWRLTAYENLRYFASIYYVPK 120
T ++ P+ G + GF++ + + + + + E + Y +T YE L + I + K
Sbjct: 50 TNIIRPSEGNVSINGFNVRENPGKALETVGSLIE-QPEFYPYITGYEALMFTCRIRGISK 108
Query: 121 K--VAE-ERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGL 177
+ ++E +R+ L H +RK YSRGMKQR+ +A ALI DP ++ LDEPT GL
Sbjct: 109 EKCISEVQRVSTLTHCRDYLNRK---TKEYSRGMKQRVGLATALIGDPSIIILDEPTFGL 165
Query: 178 DVQSAIFVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRIIALDTPEGLKKL 237
D + +R++I K+ +E K ++L+TH + EAE L D I IIDHGR++ E + L
Sbjct: 166 DPNGMMEIRDIIMKMKKE--KLIVLSTHLISEAELLADYIGIIDHGRLMHFGPVEKQRYL 223
Query: 238 VRKDTIVEVRVKNYNGENPFGLAKIKEEGEKVVLR 272
K I E V N G+ +K++ +++LR
Sbjct: 224 EVKGQINEAHV------NVPGVEIVKKDDVRMILR 252
>gb|AAC02761.2| (AC002339) putative ABC transporter [Arabidopsis thaliana]
Length = 1816
Score = 144 bits (359), Expect = 2e-33
Identities = 107/332 (32%), Positives = 173/332 (51%), Gaps = 28/332 (8%)
Query: 2 KAIEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKILT 61
+ I+V+NL K+Y + A+ + + + ++ LLG NGAGK+TTI +L
Sbjct: 447 RCIQVRNLHKVYASRRGNCC-------AVNSLQLTLYENQILSLLGHNGAGKSTTISMLV 499
Query: 62 TLLEPTSGEARVLGFDIVKEAREIRKRINLVAEGERTLYWRLTAYENLRYFASIYYVPKK 121
LL PTSG+A +LG I+ EIRK + + + + L+ LT E+L FA + V +
Sbjct: 500 GLLPPTSGDALILGNSIITNMDEIRKELGVCPQHD-ILFPELTVREHLEMFAVLKGVEEG 558
Query: 122 VAEERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQS 181
+ + ++ VGL D+ + LV S GMK++L++ ALI + +V+ LDEPT G+D S
Sbjct: 559 SLKSTVVDMAEEVGLSDKINTLVRALSGGMKRKLSLGIALIGNSKVIILDEPTSGMDPYS 618
Query: 182 AIFVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRIIALDTPEGLK------ 235
+LIKK+ ++ + +LLTTH M EAEEL DRI I+ +G + + LK
Sbjct: 619 MRLTWQLIKKI--KKGRIILLTTHSMDEAEELGDRIGIMANGSLKCCGSSIFLKHHYGVG 676
Query: 236 ---KLVRKDTIVEVRVKNYNGENPFGLAKIKEEGEKVVLRGPLDE----EDIPKLVEFLV 288
LV+ V V + P + E G ++ + PL E++ + +E +
Sbjct: 677 YTLTLVKTSPTVSVAAHIVHRHIPSATC-VSEVGNEISFKLPLASLPCFENMFREIESCM 735
Query: 289 KNNAK----VLSVEVKEPTLEDVFIKLTGRGL 316
KN+ + S + TLE+VF+++ G L
Sbjct: 736 KNSDSDYPGIQSYGISVTTLEEVFLRVAGCNL 767
Score = 142 bits (354), Expect = 6e-33
Identities = 100/266 (37%), Positives = 150/266 (55%), Gaps = 19/266 (7%)
Query: 6 VKNLRKLYP-KKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKILTTLL 64
++NLRK+YP K P K+ A++ +TF+V+ GE FG LG NGAGKTTT+ +L+
Sbjct: 1383 LQNLRKVYPGDKHHGP--KV----AVQSLTFSVQAGECFGFLGTNGAGKTTTLSMLSGEE 1436
Query: 65 EPTSGEARVLGFDIVKEAREIRKRINLVAEGERTLYWRLTAYENLRYFASIYYVPKKVAE 124
PTSG A + G DIV + IR+ I + + L+ LT E+L +A I K V +
Sbjct: 1437 TPTSGTAFIFGKDIVASPKAIRQHIGYCPQFD-ALFEYLTVKEHLELYARI----KGVVD 1491
Query: 125 ERIRNL----LHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQ 180
RI N+ L L S G K++L++A A+I DP ++ LDEP+ G+D
Sbjct: 1492 HRIDNVVTEKLVEFDLLKHSHKPSFTLSGGNKRKLSVAIAMIGDPPIVILDEPSTGMDPV 1551
Query: 181 SAIFVRELIKKLVEEEKKT-VLLTTHYMHEAEELCDRIAIIDHGRIIALDTPEGLKKLVR 239
+ F+ ++I +L KT V+LTTH M+EA+ LC RI I+ GR+ + +P+ LK R
Sbjct: 1552 AKRFMWDVISRLSTRSGKTAVILTTHSMNEAQALCTRIGIMVGGRLRCIGSPQHLK--TR 1609
Query: 240 KDTIVEVRVKNYNGENPFGLAKIKEE 265
+E+ V YNG P ++ ++ E
Sbjct: 1610 YGNHLELEVPFYNGVKPNEVSNVELE 1635
>dbj|BAB04537.1| (AP001509) bacitracin ABC transporter (ATP-binding protein)
[Bacillus halodurans]
Length = 314
Score = 144 bits (359), Expect = 2e-33
Identities = 99/317 (31%), Positives = 158/317 (49%), Gaps = 27/317 (8%)
Query: 2 KAIEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKILT 61
K I +NL K + K E + + +V KGE++G LGPNGAGKTT +K+L
Sbjct: 3 KVITTRNLTKTFQGK-----------EIISNLNLHVNKGEIYGFLGPNGAGKTTVMKMLM 51
Query: 62 TLLEPTSGEARVLGFDIVKEAREIRKRINLVAEGERTLYWRLTAYENLRYFASI--YYVP 119
++P++GE + G + ++ E+ KRI + E Y +L+A ENL YY P
Sbjct: 52 NFVKPSAGEIELFGQRLTSQSYEMLKRIGSMIEFP-IFYEKLSARENLELHCEYMGYYKP 110
Query: 120 KKVAEERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDV 179
+ E L MV L V ++S GMKQRL IA+A+ PE+L LDEP GLD
Sbjct: 111 SAIEEA-----LEMVKLQLTGSKAVKDFSLGMKQRLGIARAICTKPELLILDEPINGLDP 165
Query: 180 QSAIFVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRI---IALDTPEGLKK 236
+R+L + L E T+L+++H + E E++ D + +I +G + +ALD +
Sbjct: 166 VGIKEIRQLFQTLCNEYGVTILISSHILSEIEQIADTVGVIRNGMLVAEVALDDIRSQQT 225
Query: 237 LVRKDTIVEVRVKNYNGENPFGLAKIKEEGEKV--VLRGPLDEEDIPKLVEFLVKNNAKV 294
+ + R Y +N GL +K + + + L + + K L+ N+ +
Sbjct: 226 EYIELLTYDARKALYVLDNELGLKNVKLMDQSLIRIYDHHLTQNQLSKT---LISNDVNI 282
Query: 295 LSVEVKEPTLEDVFIKL 311
++ K +LED F+ L
Sbjct: 283 EAIARKNHSLEDYFMNL 299
>gb|AAC80570.1| (AF105431) NodI [Bradyrhizobium sp. SNU001]
Length = 305
Score = 143 bits (356), Expect = 3e-33
Identities = 104/320 (32%), Positives = 162/320 (50%), Gaps = 33/320 (10%)
Query: 3 AIEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKILTT 62
AI++ +RK + K+ + ++F+V +GE FGLLGPNGAGK+T ++L
Sbjct: 7 AIDLVGVRKSFGDKV-----------IVNDLSFSVARGECFGLLGPNGAGKSTIARMLLG 55
Query: 63 LLEPTSGEARVLGFDIVKEAREIRKRINLVAEGERTLYWRLTAYENLRYFASIYYVPKKV 122
++ P G+ VL + AR R+ + +V + + L T ENL F + + +
Sbjct: 56 MIWPDRGKITVLDEPVPSRARA-RRGVGVVPQFDN-LEPEFTVRENLLVFGRYFGMSART 113
Query: 123 AEERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQSA 182
E + +LL L + D V GMK+RL +A+ALINDP +L +DEPT GLD +
Sbjct: 114 IEAVVPSLLEFARLESKADVRVSLLGGGMKRRLTLARALINDPHLLVMDEPTTGLDPHAR 173
Query: 183 IFVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRIIALDTPEGLKKLVRKDT 242
+ E ++ L+ KT+LLTTH+M EAE LCD + +++ G IA P+ L
Sbjct: 174 HLIWERLRALL-ARGKTILLTTHFMEEAERLCDPLCVLESGCKIAEGEPDALIDEHIGCN 232
Query: 243 IVEVRVKNYNGE--------NPFGLAKIKEEGEKVVLRGPLDEEDIPKLVEFLVKNNAKV 294
++E+ Y G+ P+ I+ GE + +E V + +V
Sbjct: 233 VIEI----YGGDLDQLRELIRPYA-RHIEVSGETLFCYARCPDE---ISVHLRGRTGLRV 284
Query: 295 LSVEVKEPTLEDVFIKLTGR 314
L + P LEDVF++LTGR
Sbjct: 285 LQ---RPPNLEDVFLRLTGR 301
>pir||T36000 probable ABC-type transport system ATP-binding chain - Streptomyces
coelicolor >gi|5459395|emb|CAB50753.1| (AL096839)
putative ABC transporter, ATP-binding subunit
[Streptomyces coelicolor A3(2)]
Length = 307
Score = 143 bits (356), Expect = 3e-33
Identities = 100/297 (33%), Positives = 156/297 (51%), Gaps = 19/297 (6%)
Query: 29 ALKGITFNVKKGELFGLLGPNGAGKTTTIKILTTLLEPTSGEARVLGFDIVKEAREIRKR 88
A+ G+ + G + +LGPNGAGKTTT++ P SG RVLG D V++ E+R R
Sbjct: 21 AVNGLDLVARTG-VTAVLGPNGAGKTTTVETCEGYRRPDSGTVRVLGLDPVRQGAELRPR 79
Query: 89 INLVAEGERTLYWRLTAYENLRYFASIYYVPKKVAEERIRNLLHMVGLWDRKDDLVMNYS 148
I ++ + +Y A E LR+ A ++ P V L+ +GL S
Sbjct: 80 IGVMLQ-SGGVYSGARADEMLRHVAKLHAHPLDVDA-----LIERLGLDSCGRTTYRRLS 133
Query: 149 RGMKQRLAIAKALINDPEVLFLDEPTLGLDVQSAIFVRELIKKLVEEEKKTVLLTTHYMH 208
G +QRLA+A A++ PE++FLDEPT GLD Q+ +L++ L + +V+LTTH+M
Sbjct: 134 GGQQQRLALAMAVVGRPELVFLDEPTAGLDPQARRATWDLVRDL-RGDGVSVILTTHHMD 192
Query: 209 EAEELCDRIAIIDHGRIIALDTPEGLKKLVRKDTIVEVRVKNYNGENPFGLAKIKEEGEK 268
EAE+L D +AIID GR++A +PE L + ++T+ R G + L K
Sbjct: 193 EAEQLADDVAIIDTGRVVAQGSPEELCRGGAENTL---RFTGRPGLDVASLLKALPPDSA 249
Query: 269 VV--------LRGPLDEEDIPKLVEFLVKNNAKVLSVEVKEPTLEDVFIKLTGRGLR 317
+ G +D + + + + ++ + V+ TLEDVF++LTG+ LR
Sbjct: 250 AAELTPGSYRVNGEVDPQLLATVTSWCAQHGVMPDRISVERHTLEDVFLELTGKELR 306
>gb|AAK43268.1| ABC transporter, ATP binding protein related protein [Sulfolobus
solfataricus]
Length = 275
Score = 142 bits (354), Expect = 6e-33
Identities = 105/293 (35%), Positives = 159/293 (53%), Gaps = 37/293 (12%)
Query: 29 ALKGITFNVKKGELFGLLGPNGAGKTTTIKILTTLLEPTSGEARVLGFDIVKEAREIRKR 88
AL +TF+ + LLG NGAGKTT +IL+T L PTSG ARV G+D+VK+AR++RK
Sbjct: 17 ALDNLTFSANT-RVVTLLGRNGAGKTTLTRILSTQLLPTSGIARVEGYDVVKDARKVRKI 75
Query: 89 INLVAEGERTLYWRLTAYENLRYFASIYYVPKKVAEERIRNLLHMVGLWDRKDDLVMNYS 148
I + + +++ + E+L + + + K A E R+ L VGLW+ +D S
Sbjct: 76 IASIPQEAKSI-GIASPMEHLIMYLTARGLSFKEATEISRSALKEVGLWEVRDKPSDELS 134
Query: 149 RGMKQRLAIAKALINDPEVLFLDEPTLGLDVQSAIFVRELIKKLVEEEKKTVLLTTHYMH 208
GMK+++ +A AL ++ E++ LDEPT GLD S + V ++K + K +LLTTHYM
Sbjct: 135 GGMKRKIFVAMALASNAELVLLDEPTTGLDPYSRLEVWSVLKSI----KSKILLTTHYME 190
Query: 209 EAEELCDRIAIIDHGRIIALDTPEGLKKLVRKDTIVEVRVKNYNGENPFGLAKIKEEGEK 268
EAEEL D + ++ G++IA K +I E+ K N K++ EG
Sbjct: 191 EAEELSDEVILLHKGKLIA------------KGSIKELLTKFDN--------KVRIEG-- 228
Query: 269 VVLRGPLDEEDIPKL-VEFLVKNNAK--VLSVEVKEPTLEDVFIKLTGRGLRD 318
+ E I +L + ++ +N A V +K TLED+FI G L +
Sbjct: 229 ------IGEYKIGRLRISYVDRNEASDYVGKYVIKPITLEDLFIIYGGESLEE 275
>pir||T00826 hypothetical protein T32G6.22 - Arabidopsis thaliana (fragment)
Length = 1246
Score = 142 bits (354), Expect = 6e-33
Identities = 100/266 (37%), Positives = 150/266 (55%), Gaps = 19/266 (7%)
Query: 6 VKNLRKLYP-KKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKILTTLL 64
++NLRK+YP K P K+ A++ +TF+V+ GE FG LG NGAGKTTT+ +L+
Sbjct: 813 LQNLRKVYPGDKHHGP--KV----AVQSLTFSVQAGECFGFLGTNGAGKTTTLSMLSGEE 866
Query: 65 EPTSGEARVLGFDIVKEAREIRKRINLVAEGERTLYWRLTAYENLRYFASIYYVPKKVAE 124
PTSG A + G DIV + IR+ I + + L+ LT E+L +A I K V +
Sbjct: 867 TPTSGTAFIFGKDIVASPKAIRQHIGYCPQFD-ALFEYLTVKEHLELYARI----KGVVD 921
Query: 125 ERIRNL----LHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQ 180
RI N+ L L S G K++L++A A+I DP ++ LDEP+ G+D
Sbjct: 922 HRIDNVVTEKLVEFDLLKHSHKPSFTLSGGNKRKLSVAIAMIGDPPIVILDEPSTGMDPV 981
Query: 181 SAIFVRELIKKLVEEEKKT-VLLTTHYMHEAEELCDRIAIIDHGRIIALDTPEGLKKLVR 239
+ F+ ++I +L KT V+LTTH M+EA+ LC RI I+ GR+ + +P+ LK R
Sbjct: 982 AKRFMWDVISRLSTRSGKTAVILTTHSMNEAQALCTRIGIMVGGRLRCIGSPQHLK--TR 1039
Query: 240 KDTIVEVRVKNYNGENPFGLAKIKEE 265
+E+ V YNG P ++ ++ E
Sbjct: 1040 YGNHLELEVPFYNGVKPNEVSNVELE 1065
Score = 85.0 bits (207), Expect = 1e-15
Identities = 66/200 (33%), Positives = 104/200 (52%), Gaps = 20/200 (10%)
Query: 134 VGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQSAIFVRELIKKLV 193
VGL D+ + LV S GMK++L++ ALI + +V+ LDEPT G+D S +LIKK+
Sbjct: 1 VGLSDKINTLVRALSGGMKRKLSLGIALIGNSKVIILDEPTSGMDPYSMRLTWQLIKKI- 59
Query: 194 EEEKKTVLLTTHYMHEAEELCDRIAIIDHGRIIALDTPEGLK---------KLVRKDTIV 244
++ + +LLTTH M EAEEL DRI I+ +G + + LK LV+ V
Sbjct: 60 -KKGRIILLTTHSMDEAEELGDRIGIMANGSLKCCGSSIFLKHHYGVGYTLTLVKTSPTV 118
Query: 245 EVRVKNYNGENPFGLAKIKEEGEKVVLRGPLDE----EDIPKLVEFLVKNNAK----VLS 296
V + P + E G ++ + PL E++ + +E +KN+ + S
Sbjct: 119 SVAAHIVHRHIPSATC-VSEVGNEISFKLPLASLPCFENMFREIESCMKNSDSDYPGIQS 177
Query: 297 VEVKEPTLEDVFIKLTGRGL 316
+ TLE+VF+++ G L
Sbjct: 178 YGISVTTLEEVFLRVAGCNL 197
>dbj|BAB10073.1| (AB010069) contains similarity to ABC transporter~gene_id:MAC9.4
[Arabidopsis thaliana]
Length = 950
Score = 142 bits (354), Expect = 6e-33
Identities = 114/336 (33%), Positives = 167/336 (48%), Gaps = 32/336 (9%)
Query: 3 AIEVKNLRKLYPKKIPL---PFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKI 59
A+++ L K YP L K F A+KG+ N+ K +LF LLGPNGAGKTTTI
Sbjct: 519 AVQIHGLAKTYPGTTKLGCCKCTKTSPFHAVKGLWMNIAKDQLFCLLGPNGAGKTTTISC 578
Query: 60 LTTLLEPTSGEARVLGFDIVKEA--REIRKRINLVAEGERTLYWRLTAYENLRYFASIYY 117
LT + T G+A++ G I IRK I + + + L+ L++ E+L FASI
Sbjct: 579 LTGINPVTGGDAKIYGNSIRSSVGMSNIRKMIGVCPQFD-ILWDALSSEEHLHLFASIKG 637
Query: 118 VPKKVAEERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGL 177
+P + LL V L +YS GMK+RL++A ALI DP+++FLDEPT G+
Sbjct: 638 LPPSSIKSIAEKLLVDVKLTGSAKIRAGSYSGGMKRRLSVAIALIGDPKLVFLDEPTTGM 697
Query: 178 DVQSAIFVRELIKKLVEEEKK--TVLLTTHYMHEAEELCDRIAIIDHGRIIALDTPEGLK 235
D R + +++E KK ++LTTH M EA+ L DRI I+ GR+ + T LK
Sbjct: 698 DP----ITRRHVWDIIQESKKGRAIILTTHSMEEADILSDRIGIMAKGRLRCIGTSIRLK 753
Query: 236 KLVRKDTIVEVR-VKNYNGENPFGLAKIKEEGEKVVLRGPLDEED------IPKLVEFLV 288
+ V ++N P L + +E KV P +E IP E L+
Sbjct: 754 SRFGTGFVATVSFIENKKDGAPEPLKRFFKERLKV---EPTEENKAFMTFVIPHDKEQLL 810
Query: 289 K----------NNAKVLSVEVKEPTLEDVFIKLTGR 314
K + + +++ TLE+VF+ + R
Sbjct: 811 KGFFAELQDRESEFGIADIQLGLATLEEVFLNIARR 846
>emb|CAC11779.1| (AL445064) daunorubicin resistance protein related protein
[Thermoplasma acidophilum]
Length = 327
Score = 141 bits (353), Expect = 8e-33
Identities = 93/285 (32%), Positives = 153/285 (53%), Gaps = 14/285 (4%)
Query: 29 ALKGITFNVKKGELFGLLGPNGAGKTTTIKILTTLLEPTSGEARVLGFDIVKEAREIRKR 88
AL+ ++F + +F L+G NGAGKTT ++IL T L PTSG+ + DI++E IR+R
Sbjct: 42 ALRSVSFEIPMHGVFSLIGRNGAGKTTLVRILATELMPTSGKVFIDDIDIIREPDSIRRR 101
Query: 89 INLVAEGERTLYWRLTAYENLRYFASIYYVPKKVAEERIRNLLHMVGLWDRKDDLVMNYS 148
I ++ + R + W LT + + F + A+ R + +L +GL D + S
Sbjct: 102 IAIIPQEARAISW-LTPMQTVTTFLLYRGIRYSEAKARAKEVLADLGLASVADRMNRMLS 160
Query: 149 RGMKQRLAIAKALINDPEVLFLDEPTLGLDVQSAIFVRELIKKLVEEEKKTVLLTTHYMH 208
G K+++ +A + +D ++LF+DEPT GLD S + +++ L +E K + LTTHY+
Sbjct: 161 GGQKRKVLVAALVASDADILFMDEPTTGLDPISRSELWDILSDLKKE--KFIFLTTHYLE 218
Query: 209 EAEELCDRIAIIDHGRIIALDTPEGLKKLVRKDTIVEVRVKNYNGENPFGLAKIKEEGE- 267
EAE L DRI I+D G + A+ T L+ +V K + + K EN G +I+ G
Sbjct: 219 EAERLSDRIGILDQGEMKAIGTMSDLRSMVPKKYSISLVDK----EN--GNIEIENNGSV 272
Query: 268 -KVVLRGPLDEEDIPKLVEFLVKNNAKVLSVEVKEPTLEDVFIKL 311
KV R +DE + + L+ N + + +LED++ +
Sbjct: 273 IKVGSRIFVDENEAYVIARDLINRN---IRFSINPVSLEDIYYSI 314
>emb|CAB93668.1| (AJ276653) RumF protein [Ruminococcus gnavus]
Length = 248
Score = 141 bits (352), Expect = 1e-32
Identities = 84/215 (39%), Positives = 121/215 (56%), Gaps = 5/215 (2%)
Query: 22 RKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKILTTLLEPTSGEARVLGFDIVKE 81
+K + F ++ ++ ++KKG ++G LGPNGAGK+TT+K+L L PTSG ++ G +
Sbjct: 12 KKYKNFTSVNKVSLHIKKGSIYGFLGPNGAGKSTTMKMLLGLTAPTSGSFQIDGKQFPND 71
Query: 82 AREIRKRINLVAEGERTLYWRLTAYENLRYFASIYYVPKKVAEERIRNLLHMVGLWDRKD 141
I KRI E + Y LT ENL I +P+ E+ L +VGL D
Sbjct: 72 RLTILKRIGSFIEAP-SFYANLTGRENLDIIRRILGLPQNAVEDA----LDLVGLSQFGD 126
Query: 142 DLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQSAIFVRELIKKLVEEEKKTVL 201
L YS GMKQRL +A AL+ P +L LDEPT GLD +R LIK L TVL
Sbjct: 127 RLAKKYSLGMKQRLGLAGALLGRPPILILDEPTNGLDPSGIHEIRNLIKSLPTFYDCTVL 186
Query: 202 LTTHYMHEAEELCDRIAIIDHGRIIALDTPEGLKK 236
+++H + E E + D I I++HGR++ + + LK+
Sbjct: 187 ISSHMLSEIELIADDIGILNHGRMLFEGSLDDLKQ 221
>pir||S47705 hypothetical protein f648 - Escherichia coli
>gi|912462|gb|AAB18461.1| (U00039) No definition line
found [Escherichia coli]
Length = 648
Score = 141 bits (352), Expect = 1e-32
Identities = 75/208 (36%), Positives = 129/208 (61%), Gaps = 2/208 (0%)
Query: 27 FEALKGITFNVKKGELFGLLGPNGAGKTTTIKILTTLLEPTSGEARVLGFDIVKEAREIR 86
F A+ + F + +GE+FG LG NG GK+TT+K+LT LL + GEA + G + + + R
Sbjct: 26 FVAVDHVNFRIPRGEIFGFLGSNGCGKSTTMKMLTGLLPASEGEAWLFGQPVDPKDIDTR 85
Query: 87 KRINLVAEGERTLYWRLTAYENLRYFASIYYVPKKVAEERIRNLLHMVGLWDRKDDLVMN 146
+R+ +++ +LY LT +NL A ++++P+ R+ + L D +D L +
Sbjct: 86 RRVGYMSQAF-SLYNELTVRQNLELHARLFHIPEAEIPARVAEMSERFKLNDVEDILPES 144
Query: 147 YSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQSAIFVRELIKKLVEEEKKTVLLTTHY 206
G++QRL++A A+I+ PE+L LDEPT G+D + +L+ L ++K T+ ++TH+
Sbjct: 145 LPLGIRQRLSLAVAVIHRPEMLILDEPTSGVDPVARDMFWQLMVDLSRQDKVTIFISTHF 204
Query: 207 MHEAEELCDRIAIIDHGRIIALDTPEGL 234
M+EAE CDRI+++ G+++A TP+ L
Sbjct: 205 MNEAER-CDRISLMHAGKVLASGTPQEL 231
>sp|P37624|YHIH_ECOLI HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PROTEIN YHIH
>gi|7430321|pir||A65146 probable ABC transporter yhiH -
Escherichia coli >gi|2367231|gb|AAC76511.1| (AE000424)
putative ATP-binding component of a transport system,
fragment 1 [Escherichia coli K12]
Length = 894
Score = 141 bits (352), Expect = 1e-32
Identities = 75/208 (36%), Positives = 129/208 (61%), Gaps = 2/208 (0%)
Query: 27 FEALKGITFNVKKGELFGLLGPNGAGKTTTIKILTTLLEPTSGEARVLGFDIVKEAREIR 86
F A+ + F + +GE+FG LG NG GK+TT+K+LT LL + GEA + G + + + R
Sbjct: 272 FVAVDHVNFRIPRGEIFGFLGSNGCGKSTTMKMLTGLLPASEGEAWLFGQPVDPKDIDTR 331
Query: 87 KRINLVAEGERTLYWRLTAYENLRYFASIYYVPKKVAEERIRNLLHMVGLWDRKDDLVMN 146
+R+ +++ +LY LT +NL A ++++P+ R+ + L D +D L +
Sbjct: 332 RRVGYMSQAF-SLYNELTVRQNLELHARLFHIPEAEIPARVAEMSERFKLNDVEDILPES 390
Query: 147 YSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQSAIFVRELIKKLVEEEKKTVLLTTHY 206
G++QRL++A A+I+ PE+L LDEPT G+D + +L+ L ++K T+ ++TH+
Sbjct: 391 LPLGIRQRLSLAVAVIHRPEMLILDEPTSGVDPVARDMFWQLMVDLSRQDKVTIFISTHF 450
Query: 207 MHEAEELCDRIAIIDHGRIIALDTPEGL 234
M+EAE CDRI+++ G+++A TP+ L
Sbjct: 451 MNEAER-CDRISLMHAGKVLASGTPQEL 477
Score = 116 bits (287), Expect = 4e-25
Identities = 76/221 (34%), Positives = 120/221 (53%), Gaps = 5/221 (2%)
Query: 29 ALKGITFNVKKGELFGLLGPNGAGKTTTIKILTTLLEPTSGEARVLGFDI--VKEAREIR 86
AL IT ++ + GL+GP+G GK++ + +++ G VLG D+ K R++
Sbjct: 10 ALNNITLDIPARCMVGLIGPDGVGKSSLLSLISGARVIEQGNVMVLGGDMRDPKHRRDVC 69
Query: 87 KRINLVAEG-ERTLYWRLTAYENLRYFASIYYVPKKVAEERIRNLLHMVGLWDRKDDLVM 145
RI + +G + LY L+ YEN+ +FA ++ K E RI LL GL +D
Sbjct: 70 PRIAWMPQGLGKNLYHTLSVYENVDFFARLFGHDKAEREVRINELLTSTGLAPFRDRPAG 129
Query: 146 NYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQSAIFVRELIKKLVEEEKK-TVLLTT 204
S GMKQ+L + ALI+DPE+L LDEPT G+D S +LI + + + +VL+ T
Sbjct: 130 KLSGGMKQKLGLCCALIHDPELLILDEPTTGVDPLSRSQFWDLIDSIRQRQSNMSVLVAT 189
Query: 205 HYMHEAEELCDRIAIIDHGRIIALDTPEGLKKLVRKDTIVE 245
YM EAE D + ++ G ++A + E L++ + T+ E
Sbjct: 190 AYMEEAERF-DWLVAMNAGEVLATGSAEELRQQTQSATLEE 229
>pir||C83188 probable ATP-binding component of ABC transporter PA3672 [imported]
- Pseudomonas aeruginosa (strain PAO1)
>gi|9949834|gb|AAG07060.1|AE004786_12 (AE004786)
probable ATP-binding component of ABC transporter
[Pseudomonas aeruginosa]
Length = 307
Score = 141 bits (351), Expect = 1e-32
Identities = 101/321 (31%), Positives = 162/321 (50%), Gaps = 32/321 (9%)
Query: 4 IEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKILTTL 63
IE +NL K + ++ A+ ++F V+ GE+ G LGPNGAGK+TT+K+LT
Sbjct: 2 IETRNLGKRFGSRV-----------AVDDLSFQVETGEVLGFLGPNGAGKSTTMKMLTGF 50
Query: 64 LEPTSGEARVLGFDIVKEAREIRKRINLVAEGERTLYWRLTAYENLRYFASIYYVPKKVA 123
L P +G A + GFDI + ++ I + EG Y +T L + A I
Sbjct: 51 LAPCAGTASIFGFDIRNRTLQAQRLIGYLPEGS-PCYAEMTVQGFLDFIAEIRGYRGAGK 109
Query: 124 EERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQSAI 183
ER+ L ++ L + + + S+G ++R+ +A+A++++P L LDEPT GLD
Sbjct: 110 RERVARALGLLELDEVRRQTIETLSKGFRRRVGLAQAILHEPRALVLDEPTDGLDPNQKH 169
Query: 184 FVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRIIALDTPEGLKKLVRKDTI 243
VRELI+ L +E + V+++TH + E LC R +I GR++A TP L R
Sbjct: 170 QVRELIRGLAQE--RIVIISTHILEEVSALCSRALVIGGGRLLADSTPLELASRSRYHQA 227
Query: 244 VEVRVKNYNGENPF---------GLAKIKE---EGEKVVLRGPLDEEDIPKLVEFLVKNN 291
V + Y+ E P G+A I+E EG VL P P++ + +
Sbjct: 228 VTL----YSDE-PLDAVALAVLPGVAGIEENPAEGSLTVLAQP-GAVIFPQVSGLVAERG 281
Query: 292 AKVLSVEVKEPTLEDVFIKLT 312
++ ++V+ L++VF LT
Sbjct: 282 WRIRELDVERGRLDEVFRNLT 302
>gi|6005701 ATP-binding cassette, sub-family A member 8 [Homo sapiens]
>gi|4240130|dbj|BAA74845.1| (AB020629) KIAA0822 protein
[Homo sapiens]
Length = 1581
Score = 140 bits (350), Expect = 2e-32
Identities = 96/316 (30%), Positives = 165/316 (51%), Gaps = 17/316 (5%)
Query: 9 LRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKILTTLLEPTS 68
LRK Y K F K + A + ++F V+KGE+ GLLG NGAGK+T+IK++T +PT+
Sbjct: 1245 LRKEYAGKRKGCFSKRKNKIATRNVSFCVRKGEVLGLLGHNGAGKSTSIKVITGDTKPTA 1304
Query: 69 GEARVLGFDIVKEAREIRKRINLVAEGERTLYWRLTAYENLRYFASIYYVPKKVAEERIR 128
G+ + G + + + + E L+ LT ++L +A++ + K AE I
Sbjct: 1305 GQVLLKG----SGGGDALEFLGYCPQ-ENALWPNLTVRQHLEVYAAVKGLRKGDAEVAIT 1359
Query: 129 NLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQSAIFVREL 188
L+ + L D+ V S G+K++L +++ +P V+ LDEP+ G+D + + +
Sbjct: 1360 RLVDALKLQDQLKSPVKTLSEGIKRKLCFVLSILGNPSVVLLDEPSTGMDPEGQQQMWQA 1419
Query: 189 IKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRIIALDTPEGLKKLVRKDTIVEVRV 248
I+ ++ LLTTHYM EAE +CDR+AI+ GR+ + + + LK KD ++E++V
Sbjct: 1420 IRATFRNTERGALLTTHYMAEAEAVCDRVAIMVSGRLRCIGSIQHLKSKFGKDYLLEMKV 1479
Query: 249 KNYNGENPFGLAKI-------KEEGEKVVLRGPLDEEDIPKLVEFL-----VKNNAKVLS 296
KN P + ++E ++ L ED+ L + VK + +
Sbjct: 1480 KNLAQVEPLHAEILRLFPQAARQERYSSLMVYKLPVEDVQPLAQAFFKLEKVKQSFDLEE 1539
Query: 297 VEVKEPTLEDVFIKLT 312
+ + TLE VF++L+
Sbjct: 1540 YSLSQSTLEQVFLELS 1555
>gb|AAC17172.1| (AF065141) ABC transporter ATP-binding protein homolog
[Streptococcus mutans]
Length = 293
Score = 140 bits (349), Expect = 2e-32
Identities = 87/226 (38%), Positives = 126/226 (55%), Gaps = 15/226 (6%)
Query: 2 KAIEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKILT 61
K +E+K+L K Y +++ AL + ++KGE++GL+G NGAGKTT IK++T
Sbjct: 3 KVLEIKHLSKRYGQQL-----------ALDNVNLTIQKGEIYGLIGKNGAGKTTLIKVIT 51
Query: 62 TLLEPTSGEARVLGFDIVKEAREIRKRINLVAEGERTLYWRLTAYENLRYFASIYYVPKK 121
L++P+ G V G E KR+ V E L LTA +NL Y+ +VP
Sbjct: 52 KLIQPSQGSVSVFGSSTQSEWTHALKRVGSVIETPVALN-HLTARQNLHYYCKARHVPN- 109
Query: 122 VAEERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQS 181
A++ I L +VGL + +S GMKQRL IA ALI P+ L LDEP GLD +
Sbjct: 110 -ADKVIDESLTLVGLTNTGKKKFRGFSLGMKQRLGIAIALIVKPDFLILDEPINGLDPVA 168
Query: 182 AIFVRELIKKLVEEEKKTVLLTTHYM-HEAEELCDRIAIIDHGRII 226
R +IKKL EE TV++++H + E ++ + II++GRII
Sbjct: 169 IKEFRHMIKKLNEEHDMTVIISSHILSDELYQVATKFGIIENGRII 214
>gb|AAK41395.1| ABC transporter, ATP binding protein [Sulfolobus solfataricus]
Length = 275
Score = 139 bits (348), Expect = 3e-32
Identities = 106/311 (34%), Positives = 166/311 (53%), Gaps = 41/311 (13%)
Query: 1 MKAIEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKIL 60
M IEV N+ K Y K I A + IT VK+GE+ LLGPNGAGKTT +K +
Sbjct: 1 MYVIEVNNVWKAYGKII-----------ANEDITMRVKEGEIVALLGPNGAGKTTLVKQI 49
Query: 61 TTLLEPTSGEARVLGFDIVKEAREIRKRINLVAEGERTLYWRLTAYENLRYFASIYYVPK 120
L PT GE RVLG R ++K + ++ + E Y LT ++N+ Y + K
Sbjct: 50 YGELTPTKGEIRVLGKKPTD--RHVKKFLGVIPQ-ECEPYGDLTVWDNIYYMGRLKGASK 106
Query: 121 KVAEERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQ 180
++R LL + L +++ L + S G+K+R IA ALIN+P++L LDEPT GLD +
Sbjct: 107 DEIKKRGEELLERLDLRSKRNTLARDLSGGLKRRTLIAMALINNPKLLILDEPTTGLDPE 166
Query: 181 SAIFVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRIIALDTPEGLKKLVRK 240
+ V E++ + +E +++LLTTHY+ EAE L D+I + +II TP +K+
Sbjct: 167 ARREVWEILLNM-RKEGQSMLLTTHYLDEAERLADKIYFLSR-KIIVEGTPTQIKEKFAD 224
Query: 241 DTIVEVRVKNYNGENPFGLAKIKEEGEKVVLRGPLDEEDIPKLVEFLVKNNAKVLSVEVK 300
V + NG+ + K+K EE++ K++ + N K EV+
Sbjct: 225 WYEV---IDYTNGK----VYKVK------------GEEELKKIIMTI---NGK---FEVR 259
Query: 301 EPTLEDVFIKL 311
P+LE++++++
Sbjct: 260 MPSLEEIYLQV 270
>dbj|BAB09013.1| (AB012239) contains similarity to ABC transporter~gene_id:K11J9.22
[Arabidopsis thaliana]
Length = 953
Score = 139 bits (348), Expect = 3e-32
Identities = 98/273 (35%), Positives = 140/273 (50%), Gaps = 12/273 (4%)
Query: 3 AIEVKNLRKLYPKKIPL---PFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKI 59
A+++ L K YP L K F A+KG+ N+ K +LF LLGPNGAGKTTTI
Sbjct: 518 AVQIHGLAKTYPGTTKLGCCKCTKTSPFHAVKGLWMNIAKDQLFCLLGPNGAGKTTTISC 577
Query: 60 LTTLLEPTSGEARVLGFDIVKEA--REIRKRINLVAEGERTLYWRLTAYENLRYFASIYY 117
LT + T G+A + G I IRK I + + + L+ L++ ++L FASI
Sbjct: 578 LTGINPVTGGDALIYGDSIRSSVGISNIRKMIGVCPQFD-ILWDALSSEQHLHLFASIKG 636
Query: 118 VPKKVAEERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGL 177
+P + LL V L +YS GMK+RL++A ALI DP+++FLDEPT G+
Sbjct: 637 LPPASIKSTAEKLLADVKLTGAAKVRAGSYSGGMKRRLSVAVALIGDPKLVFLDEPTTGM 696
Query: 178 DVQSAIFVRELIKKLVEEEKK--TVLLTTHYMHEAEELCDRIAIIDHGRIIALDTPEGLK 235
D R + +++E KK ++LTTH M EA+ L DRI I+ GR+ + T LK
Sbjct: 697 DP----ITRRHVWDIIQESKKGRAIILTTHSMEEADILSDRIGIMAKGRLRCIGTSIRLK 752
Query: 236 KLVRKDTIVEVRVKNYNGENPFGLAKIKEEGEK 268
+ V +N G+ E +K
Sbjct: 753 SRFGTGFVATVSFIENKNDNNIGVGASHEPLKK 785
>dbj|BAB04009.1| (AP001508) ABC transporter (ATP-binding protein) [Bacillus
halodurans]
Length = 301
Score = 139 bits (348), Expect = 3e-32
Identities = 103/322 (31%), Positives = 167/322 (50%), Gaps = 41/322 (12%)
Query: 4 IEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKILTTL 63
+E+K++ K Y +K A+ + ++ GE GL+GPNGAGKTT IK++T +
Sbjct: 3 LEIKSVTKKYKEKT-----------AVHDFSMDLLSGECVGLIGPNGAGKTTLIKMITNI 51
Query: 64 LEPTSGEARVLGFDIVKEAREIRKRINLVAEGERTLYWRLTAYENLRYFASIYYVPKKVA 123
L+PT G+ + G K E+++ I + + W +TA E L + + + KK
Sbjct: 52 LDPTRGDILLNG----KRISEMKREIGYLPQYPDFYQW-MTASETLLFMGQLSGISKKKL 106
Query: 124 EERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQSAI 183
+ I +L VGL ++ V +S GMKQRL IA+AL++ P + +DEP LD I
Sbjct: 107 TKSIPEILSKVGLRGEENSKVSTFSGGMKQRLGIAQALLHKPSFIVMDEPVSALD---PI 163
Query: 184 FVRELIKKLVEEEKK--TVLLTTHYMHEAEELCDRIAIIDHGRIIALDTPEGL-----KK 236
RE++ ++EE KK T+LL+TH + +AEE+C+R+ +I +G I T L K
Sbjct: 164 GRREVL-NIIEEIKKDSTILLSTHILADAEEICERLVMIKNGEKIEDTTMMELLNRNSKN 222
Query: 237 LVR-------KDTIVEVRVKNYNGENPFGLAKIKEEGEKVVLRGPLDEEDIPKLVEFLVK 289
+R KD I V+ NY + ++ G KV + E L+ +K
Sbjct: 223 KIRVEITDESKDWIEVVKKLNY-------VQDVEVTGNKVNVEVKNIELHKNMLLANALK 275
Query: 290 NNAKVLSVEVKEPTLEDVFIKL 311
++ ++ E+ TLE++F+KL
Sbjct: 276 HDVNIVKFELDHDTLEELFLKL 297
>gb|AAK41557.1| Antibiotic ABC transporter, ATP binding protein [Sulfolobus
solfataricus]
Length = 297
Score = 139 bits (347), Expect = 4e-32
Identities = 101/317 (31%), Positives = 171/317 (53%), Gaps = 30/317 (9%)
Query: 4 IEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKILTTL 63
I V N+ K Y KI AL ++ VKK E L+GPNGAGKTT I+IL TL
Sbjct: 2 IVVSNIVKKYGNKI-----------ALDNVSLEVKKREFVSLIGPNGAGKTTLIRILLTL 50
Query: 64 LEPTSGEARVLGFDIVKEAREIRKRINLVAEGERTLYWRLTAYENLRYFASIYYVPKKVA 123
++P GE ++LG + K R I K + V E + LT + L A I V K
Sbjct: 51 MKPDRGEVQILGENPFKSKR-IFKEVGYVQEIPNYPPF-LTGKQVLELSAKIRGVDKS-- 106
Query: 124 EERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQSAI 183
+ +L V + + ++ ++ YS+GM QR+AIA+AL+ +P +L +DEP +G+D ++
Sbjct: 107 --EVNRVLEFVEMENYANNPIVKYSKGMVQRIAIAEALLGNPSILIMDEPNMGIDPIFSL 164
Query: 184 FVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRIIALDTPEGLKKLVRKDTI 243
REL+ KL ++ ++L+T+H + + ++L DRI +I G+I+ T E +V++
Sbjct: 165 KTRELLNKLKRKDNVSILMTSHELEDVKKLSDRIFMIYKGKIVFSGTVE---DMVKEFLG 221
Query: 244 VEVRVKNYNGENPFGLAK-------IKEEGEKVVLRGPLDEEDIPKLVEFLVKNNAKVLS 296
++V V+ E G+ K I +G +++ + L+E+ +L++ LV + KV
Sbjct: 222 IQVVVETDEIEKAEGVLKGIEYVKGIFNDGNRLIAK--LNEDRREELLKDLVTSGVKVKG 279
Query: 297 VEVKEPTLEDVFIKLTG 313
+ + LE+ +++ G
Sbjct: 280 FYI-DLNLEEAYMRALG 295
>pir||S60124 transport protein homolog C48B4.4 - Caenorhabditis elegans
Length = 1767
Score = 139 bits (347), Expect = 4e-32
Identities = 83/228 (36%), Positives = 136/228 (59%), Gaps = 8/228 (3%)
Query: 29 ALKGITFNVKKGELFGLLGPNGAGKTTTIKILTTLLEPTSGEARVLGFDIVKEAREIRKR 88
A+ G++ +G+ LLG NGAGK+TT + ++ PT+G + G+D+ E E R+
Sbjct: 627 AVDGLSLRAVRGQCSILLGHNGAGKSTTFSSIAGIIRPTNGRITICGYDVGNEPGETRRH 686
Query: 89 INLVAEGERTLYWRLTAYENLRYFASIYYVPKKVAEERIRNLLHMVGLWDRKDDLVMNYS 148
I + + LY +LT E+L+ + +K ++ ++ LL V L ++++ +N S
Sbjct: 687 IGMCPQ-YNPLYDQLTVSEHLKLVYGLKGAREKDFKQDMKRLLSDVKLDFKENEKAVNLS 745
Query: 149 RGMKQRLAIAKALINDPEVLFLDEPTLGLDVQSAIFVRELIKKLVEEEK--KTVLLTTHY 206
GMK++L + ALI D EV+ LDEPT G+D + R+ ++KLVE EK +T+LLTTHY
Sbjct: 746 GGMKRKLCVCMALIGDSEVVLLDEPTAGMDPGA----RQDVQKLVEREKANRTILLTTHY 801
Query: 207 MHEAEELCDRIAIIDHGRIIALDTPEGLKKLVRKDTIVEVRVKNYNGE 254
M EAE L D + I+ HG+++A T + LK+ ++ V V ++NG+
Sbjct: 802 MDEAERLGDWVFIMSHGKLVASGTNQYLKQKFGTGYLLTV-VLDHNGD 848
Score = 118 bits (294), Expect = 6e-26
Identities = 96/330 (29%), Positives = 160/330 (48%), Gaps = 42/330 (12%)
Query: 3 AIEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKILTT 62
A+ +K+L K + + F A+ + V + E FGLLG NGAGKTTT ILT
Sbjct: 1441 ALVIKDLTKTFGR-----------FTAVNELCLAVDQKECFGLLGVNGAGKTTTFNILTG 1489
Query: 63 LLEPTSGEARVLGFDIVKEAREIRKRINLVAEGE----RTLYWRLTAYENLRYFASIYYV 118
+SGEA + G D+ + L++ G L LT E+L A ++
Sbjct: 1490 QSFASSGEAMIGGRDVTE----------LISIGYCPQFDALMLDLTGRESLEILAQMHGF 1539
Query: 119 PKKVAEERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLD 178
A+ + +L VG+ D LV YS G K+++++ AL+ +++ LDEPT G+D
Sbjct: 1540 ENYKAKAEL--ILECVGMIAHADKLVRFYSGGQKRKISVGVALLAPTQMIILDEPTAGID 1597
Query: 179 VQSAIFVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRIIALDTPEGLKKLV 238
++ V EL+ E ++LT+H M E E LC RIA+++ G +IA+ + + LK L
Sbjct: 1598 PKARREVWELLLWCREHSNSALMLTSHSMDECEALCSRIAVLNRGSLIAIGSSQELKSLY 1657
Query: 239 RKDTIVEVRVKNYNGEN----------PFGLAKIKEEGEKVVLRG--PLDEEDIPKLVEF 286
+ + + + N + P + K + + L+ P ++ED
Sbjct: 1658 GNNYTMTLSLYEPNQRDMVVQLVQTRLPNSVLKTTSTNKTLNLKWQIPKEKEDCWSAKFE 1717
Query: 287 LVKNNAKVLSVE---VKEPTLEDVFIKLTG 313
+V+ AK L V+ + + +LE+ F++L G
Sbjct: 1718 MVQALAKDLGVKDFILAQSSLEETFLRLAG 1747
>pir||T42749 ATP-binding cassette transport protein homolog - Caenorhabditis
elegans >gi|3172341|gb|AAC24116.1| (AF049142)
ATP-binding cassette transporter [Caenorhabditis
elegans]
Length = 1704
Score = 139 bits (347), Expect = 4e-32
Identities = 83/228 (36%), Positives = 136/228 (59%), Gaps = 8/228 (3%)
Query: 29 ALKGITFNVKKGELFGLLGPNGAGKTTTIKILTTLLEPTSGEARVLGFDIVKEAREIRKR 88
A+ G++ +G+ LLG NGAGK+TT + ++ PT+G + G+D+ E E R+
Sbjct: 562 AVDGLSLRAVRGQCSILLGHNGAGKSTTFSSIAGIIRPTNGRITICGYDVGNEPGETRRH 621
Query: 89 INLVAEGERTLYWRLTAYENLRYFASIYYVPKKVAEERIRNLLHMVGLWDRKDDLVMNYS 148
I + + LY +LT E+L+ + +K ++ ++ LL V L ++++ +N S
Sbjct: 622 IGMCPQ-YNPLYDQLTVSEHLKLVYGLKGAREKDFKQDMKRLLSDVKLDFKENEKAVNLS 680
Query: 149 RGMKQRLAIAKALINDPEVLFLDEPTLGLDVQSAIFVRELIKKLVEEEK--KTVLLTTHY 206
GMK++L + ALI D EV+ LDEPT G+D + R+ ++KLVE EK +T+LLTTHY
Sbjct: 681 GGMKRKLCVCMALIGDSEVVLLDEPTAGMDPGA----RQDVQKLVEREKANRTILLTTHY 736
Query: 207 MHEAEELCDRIAIIDHGRIIALDTPEGLKKLVRKDTIVEVRVKNYNGE 254
M EAE L D + I+ HG+++A T + LK+ ++ V V ++NG+
Sbjct: 737 MDEAERLGDWVFIMSHGKLVASGTNQYLKQKFGTGYLLTV-VLDHNGD 783
Score = 118 bits (294), Expect = 6e-26
Identities = 96/330 (29%), Positives = 160/330 (48%), Gaps = 42/330 (12%)
Query: 3 AIEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKILTT 62
A+ +K+L K + + F A+ + V + E FGLLG NGAGKTTT ILT
Sbjct: 1378 ALVIKDLTKTFGR-----------FTAVNELCLAVDQKECFGLLGVNGAGKTTTFNILTG 1426
Query: 63 LLEPTSGEARVLGFDIVKEAREIRKRINLVAEGE----RTLYWRLTAYENLRYFASIYYV 118
+SGEA + G D+ + L++ G L LT E+L A ++
Sbjct: 1427 QSFASSGEAMIGGRDVTE----------LISIGYCPQFDALMLDLTGRESLEILAQMHGF 1476
Query: 119 PKKVAEERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLD 178
A+ + +L VG+ D LV YS G K+++++ AL+ +++ LDEPT G+D
Sbjct: 1477 ENYKAKAEL--ILECVGMIAHADKLVRFYSGGQKRKISVGVALLAPTQMIILDEPTAGID 1534
Query: 179 VQSAIFVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRIIALDTPEGLKKLV 238
++ V EL+ E ++LT+H M E E LC RIA+++ G +IA+ + + LK L
Sbjct: 1535 PKARREVWELLLWCREHSNSALMLTSHSMDECEALCSRIAVLNRGSLIAIGSSQELKSLY 1594
Query: 239 RKDTIVEVRVKNYNGEN----------PFGLAKIKEEGEKVVLRG--PLDEEDIPKLVEF 286
+ + + + N + P + K + + L+ P ++ED
Sbjct: 1595 GNNYTMTLSLYEPNQRDMVVQLVQTRLPNSVLKTTSTNKTLNLKWQIPKEKEDCWSAKFE 1654
Query: 287 LVKNNAKVLSVE---VKEPTLEDVFIKLTG 313
+V+ AK L V+ + + +LE+ F++L G
Sbjct: 1655 MVQALAKDLGVKDFILAQSSLEETFLRLAG 1684
>sp|P34358|YLH4_CAEEL PUTATIVE ABC TRANSPORTER C48B4.4 IN CHROMOSOME III
Length = 1758
Score = 139 bits (347), Expect = 4e-32
Identities = 83/228 (36%), Positives = 136/228 (59%), Gaps = 8/228 (3%)
Query: 29 ALKGITFNVKKGELFGLLGPNGAGKTTTIKILTTLLEPTSGEARVLGFDIVKEAREIRKR 88
A+ G++ +G+ LLG NGAGK+TT + ++ PT+G + G+D+ E E R+
Sbjct: 616 AVDGLSLRAVRGQCSILLGHNGAGKSTTFSSIAGIIRPTNGRITICGYDVGNEPGETRRH 675
Query: 89 INLVAEGERTLYWRLTAYENLRYFASIYYVPKKVAEERIRNLLHMVGLWDRKDDLVMNYS 148
I + + LY +LT E+L+ + +K ++ ++ LL V L ++++ +N S
Sbjct: 676 IGMCPQ-YNPLYDQLTVSEHLKLVYGLKGAREKDFKQDMKRLLSDVKLDFKENEKAVNLS 734
Query: 149 RGMKQRLAIAKALINDPEVLFLDEPTLGLDVQSAIFVRELIKKLVEEEK--KTVLLTTHY 206
GMK++L + ALI D EV+ LDEPT G+D + R+ ++KLVE EK +T+LLTTHY
Sbjct: 735 GGMKRKLCVCMALIGDSEVVLLDEPTAGMDPGA----RQDVQKLVEREKANRTILLTTHY 790
Query: 207 MHEAEELCDRIAIIDHGRIIALDTPEGLKKLVRKDTIVEVRVKNYNGE 254
M EAE L D + I+ HG+++A T + LK+ ++ V V ++NG+
Sbjct: 791 MDEAERLGDWVFIMSHGKLVASGTNQYLKQKFGTGYLLTV-VLDHNGD 837
Score = 118 bits (294), Expect = 6e-26
Identities = 96/330 (29%), Positives = 160/330 (48%), Gaps = 42/330 (12%)
Query: 3 AIEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKILTT 62
A+ +K+L K + + F A+ + V + E FGLLG NGAGKTTT ILT
Sbjct: 1432 ALVIKDLTKTFGR-----------FTAVNELCLAVDQKECFGLLGVNGAGKTTTFNILTG 1480
Query: 63 LLEPTSGEARVLGFDIVKEAREIRKRINLVAEGE----RTLYWRLTAYENLRYFASIYYV 118
+SGEA + G D+ + L++ G L LT E+L A ++
Sbjct: 1481 QSFASSGEAMIGGRDVTE----------LISIGYCPQFDALMLDLTGRESLEILAQMHGF 1530
Query: 119 PKKVAEERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLD 178
A+ + +L VG+ D LV YS G K+++++ AL+ +++ LDEPT G+D
Sbjct: 1531 ENYKAKAEL--ILECVGMIAHADKLVRFYSGGQKRKISVGVALLAPTQMIILDEPTAGID 1588
Query: 179 VQSAIFVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRIIALDTPEGLKKLV 238
++ V EL+ E ++LT+H M E E LC RIA+++ G +IA+ + + LK L
Sbjct: 1589 PKARREVWELLLWCREHSNSALMLTSHSMDECEALCSRIAVLNRGSLIAIGSSQELKSLY 1648
Query: 239 RKDTIVEVRVKNYNGEN----------PFGLAKIKEEGEKVVLRG--PLDEEDIPKLVEF 286
+ + + + N + P + K + + L+ P ++ED
Sbjct: 1649 GNNYTMTLSLYEPNQRDMVVQLVQTRLPNSVLKTTSTNKTLNLKWQIPKEKEDCWSAKFE 1708
Query: 287 LVKNNAKVLSVE---VKEPTLEDVFIKLTG 313
+V+ AK L V+ + + +LE+ F++L G
Sbjct: 1709 MVQALAKDLGVKDFILAQSSLEETFLRLAG 1738
>emb|CAA82383.2| (Z29117) contains similarity to Pfam domain: PF00005 (ABC
transporter), Score=319.9, E-value=9.7e-93, N=2~cDNA EST
yk8d5.5 comes from this gene; cDNA EST yk10f12.3 comes
from this gene~cDNA EST yk5b3.3 comes from this gene;
cDNA EST yk5b3.5 comes from >
Length = 1689
Score = 139 bits (347), Expect = 4e-32
Identities = 83/228 (36%), Positives = 136/228 (59%), Gaps = 8/228 (3%)
Query: 29 ALKGITFNVKKGELFGLLGPNGAGKTTTIKILTTLLEPTSGEARVLGFDIVKEAREIRKR 88
A+ G++ +G+ LLG NGAGK+TT + ++ PT+G + G+D+ E E R+
Sbjct: 549 AVDGLSLRAVRGQCSILLGHNGAGKSTTFSSIAGIIRPTNGRITICGYDVGNEPGETRRH 608
Query: 89 INLVAEGERTLYWRLTAYENLRYFASIYYVPKKVAEERIRNLLHMVGLWDRKDDLVMNYS 148
I + + LY +LT E+L+ + +K ++ ++ LL V L ++++ +N S
Sbjct: 609 IGMCPQ-YNPLYDQLTVSEHLKLVYGLKGAREKDFKQDMKRLLSDVKLDFKENEKAVNLS 667
Query: 149 RGMKQRLAIAKALINDPEVLFLDEPTLGLDVQSAIFVRELIKKLVEEEK--KTVLLTTHY 206
GMK++L + ALI D EV+ LDEPT G+D + R+ ++KLVE EK +T+LLTTHY
Sbjct: 668 GGMKRKLCVCMALIGDSEVVLLDEPTAGMDPGA----RQDVQKLVEREKANRTILLTTHY 723
Query: 207 MHEAEELCDRIAIIDHGRIIALDTPEGLKKLVRKDTIVEVRVKNYNGE 254
M EAE L D + I+ HG+++A T + LK+ ++ V V ++NG+
Sbjct: 724 MDEAERLGDWVFIMSHGKLVASGTNQYLKQKFGTGYLLTV-VLDHNGD 770
Score = 118 bits (294), Expect = 6e-26
Identities = 96/330 (29%), Positives = 160/330 (48%), Gaps = 42/330 (12%)
Query: 3 AIEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKILTT 62
A+ +K+L K + + F A+ + V + E FGLLG NGAGKTTT ILT
Sbjct: 1363 ALVIKDLTKTFGR-----------FTAVNELCLAVDQKECFGLLGVNGAGKTTTFNILTG 1411
Query: 63 LLEPTSGEARVLGFDIVKEAREIRKRINLVAEGE----RTLYWRLTAYENLRYFASIYYV 118
+SGEA + G D+ + L++ G L LT E+L A ++
Sbjct: 1412 QSFASSGEAMIGGRDVTE----------LISIGYCPQFDALMLDLTGRESLEILAQMHGF 1461
Query: 119 PKKVAEERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLD 178
A+ + +L VG+ D LV YS G K+++++ AL+ +++ LDEPT G+D
Sbjct: 1462 ENYKAKAEL--ILECVGMIAHADKLVRFYSGGQKRKISVGVALLAPTQMIILDEPTAGID 1519
Query: 179 VQSAIFVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRIIALDTPEGLKKLV 238
++ V EL+ E ++LT+H M E E LC RIA+++ G +IA+ + + LK L
Sbjct: 1520 PKARREVWELLLWCREHSNSALMLTSHSMDECEALCSRIAVLNRGSLIAIGSSQELKSLY 1579
Query: 239 RKDTIVEVRVKNYNGEN----------PFGLAKIKEEGEKVVLRG--PLDEEDIPKLVEF 286
+ + + + N + P + K + + L+ P ++ED
Sbjct: 1580 GNNYTMTLSLYEPNQRDMVVQLVQTRLPNSVLKTTSTNKTLNLKWQIPKEKEDCWSAKFE 1639
Query: 287 LVKNNAKVLSVE---VKEPTLEDVFIKLTG 313
+V+ AK L V+ + + +LE+ F++L G
Sbjct: 1640 MVQALAKDLGVKDFILAQSSLEETFLRLAG 1669
>emb|CAA82384.2| (Z29117) contains similarity to Pfam domain: PF00005 (ABC
transporter), Score=319.9, E-value=9.7e-93, N=2~cDNA EST
yk251b11.3 comes from this gene~cDNA EST yk251b11.5
comes from this gene~cDNA EST yk576e5.5 comes from this
gene~cDNA EST yk595f5.5 comes>
Length = 1691
Score = 139 bits (347), Expect = 4e-32
Identities = 83/228 (36%), Positives = 136/228 (59%), Gaps = 8/228 (3%)
Query: 29 ALKGITFNVKKGELFGLLGPNGAGKTTTIKILTTLLEPTSGEARVLGFDIVKEAREIRKR 88
A+ G++ +G+ LLG NGAGK+TT + ++ PT+G + G+D+ E E R+
Sbjct: 549 AVDGLSLRAVRGQCSILLGHNGAGKSTTFSSIAGIIRPTNGRITICGYDVGNEPGETRRH 608
Query: 89 INLVAEGERTLYWRLTAYENLRYFASIYYVPKKVAEERIRNLLHMVGLWDRKDDLVMNYS 148
I + + LY +LT E+L+ + +K ++ ++ LL V L ++++ +N S
Sbjct: 609 IGMCPQ-YNPLYDQLTVSEHLKLVYGLKGAREKDFKQDMKRLLSDVKLDFKENEKAVNLS 667
Query: 149 RGMKQRLAIAKALINDPEVLFLDEPTLGLDVQSAIFVRELIKKLVEEEK--KTVLLTTHY 206
GMK++L + ALI D EV+ LDEPT G+D + R+ ++KLVE EK +T+LLTTHY
Sbjct: 668 GGMKRKLCVCMALIGDSEVVLLDEPTAGMDPGA----RQDVQKLVEREKANRTILLTTHY 723
Query: 207 MHEAEELCDRIAIIDHGRIIALDTPEGLKKLVRKDTIVEVRVKNYNGE 254
M EAE L D + I+ HG+++A T + LK+ ++ V V ++NG+
Sbjct: 724 MDEAERLGDWVFIMSHGKLVASGTNQYLKQKFGTGYLLTV-VLDHNGD 770
Score = 118 bits (294), Expect = 6e-26
Identities = 96/330 (29%), Positives = 160/330 (48%), Gaps = 42/330 (12%)
Query: 3 AIEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKILTT 62
A+ +K+L K + + F A+ + V + E FGLLG NGAGKTTT ILT
Sbjct: 1365 ALVIKDLTKTFGR-----------FTAVNELCLAVDQKECFGLLGVNGAGKTTTFNILTG 1413
Query: 63 LLEPTSGEARVLGFDIVKEAREIRKRINLVAEGE----RTLYWRLTAYENLRYFASIYYV 118
+SGEA + G D+ + L++ G L LT E+L A ++
Sbjct: 1414 QSFASSGEAMIGGRDVTE----------LISIGYCPQFDALMLDLTGRESLEILAQMHGF 1463
Query: 119 PKKVAEERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLD 178
A+ + +L VG+ D LV YS G K+++++ AL+ +++ LDEPT G+D
Sbjct: 1464 ENYKAKAEL--ILECVGMIAHADKLVRFYSGGQKRKISVGVALLAPTQMIILDEPTAGID 1521
Query: 179 VQSAIFVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRIIALDTPEGLKKLV 238
++ V EL+ E ++LT+H M E E LC RIA+++ G +IA+ + + LK L
Sbjct: 1522 PKARREVWELLLWCREHSNSALMLTSHSMDECEALCSRIAVLNRGSLIAIGSSQELKSLY 1581
Query: 239 RKDTIVEVRVKNYNGEN----------PFGLAKIKEEGEKVVLRG--PLDEEDIPKLVEF 286
+ + + + N + P + K + + L+ P ++ED
Sbjct: 1582 GNNYTMTLSLYEPNQRDMVVQLVQTRLPNSVLKTTSTNKTLNLKWQIPKEKEDCWSAKFE 1641
Query: 287 LVKNNAKVLSVE---VKEPTLEDVFIKLTG 313
+V+ AK L V+ + + +LE+ F++L G
Sbjct: 1642 MVQALAKDLGVKDFILAQSSLEETFLRLAG 1671
>gb|AAK42130.1| Antibiotic ABC transporter ATP binding protein [Sulfolobus
solfataricus]
Length = 297
Score = 138 bits (344), Expect = 9e-32
Identities = 100/311 (32%), Positives = 168/311 (53%), Gaps = 24/311 (7%)
Query: 4 IEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKILTTL 63
I V ++ K Y KI AL I+ VKKGE L+GPNGAGKTT I+IL TL
Sbjct: 2 IVVSSIVKKYGNKI-----------ALDNISLEVKKGEFVSLIGPNGAGKTTLIRILLTL 50
Query: 64 LEPTSGEARVLGFDIVKEAREIRKRINLVAEGERTLYWRLTAYENLRYFASIYYVPKKVA 123
++P GE ++LG + + R I K I V E + LT + L A I V K
Sbjct: 51 MKPDKGEVQILGENPFRNKR-IFKAIGYVQEIPNYPPF-LTGRQVLELSAKIRGVDKS-- 106
Query: 124 EERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQSAI 183
++ +L V + + + ++ YS+GM QR+AIA++L+ +P +L +DEP +G+D ++
Sbjct: 107 --EVKRVLEFVEMENYANSPIIKYSKGMVQRIAIAESLLGNPSILIMDEPNMGIDPIFSL 164
Query: 184 FVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRIIALDTPEG-LKKLVRKDT 242
REL+ KL ++ ++L+T+H + + ++L DRI +I G+I+ T E +K+ +
Sbjct: 165 KTRELLNKLKRKDNVSILMTSHELEDVKKLSDRIFMIYKGKIVFSGTVEDMIKEFLGIQV 224
Query: 243 IVEVRVKNYNGENPFGLAKIK---EEGEKVVLRGPLDEEDIPKLVEFLVKNNAKVLSVEV 299
IVE E G+ +K +G +++++ L+E+ L+ LV + KV +
Sbjct: 225 IVETDEIENAEEALKGIEYVKGVFNDGNRLIVK--LNEDRREDLLRDLVTSGVKVKGFYI 282
Query: 300 KEPTLEDVFIK 310
+ LE+ +++
Sbjct: 283 -DLNLEEAYMR 292
>dbj|BAB04167.1| (AP001508) ABC transporter (ATP-binding protein) [Bacillus
halodurans]
Length = 307
Score = 138 bits (343), Expect = 1e-31
Identities = 96/327 (29%), Positives = 166/327 (50%), Gaps = 45/327 (13%)
Query: 4 IEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKILTTL 63
IE K L+K+Y +P+ + + V +GE+FG LGPNG+GKTT +++L L
Sbjct: 3 IEAKGLKKIY-NHVPV----------VDDVDLLVPEGEVFGFLGPNGSGKTTVMRMLLGL 51
Query: 64 LEPTSGEARVLGFDIVKEAREIRKRINLVAEGERTLYWRLTAYENLRYFASIYYVPKKVA 123
++ G+ ++LG + K I K + + E Y L A +NL+ A++ +
Sbjct: 52 VKTDGGDIKILGKSLEKNRLSILKEVGALIETP-AYYGHLNAIDNLKIAATLRQIED--- 107
Query: 124 EERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQSAI 183
+I L VGL K V ++S GMKQRL IA AL++ P++L LDEPT GLD +
Sbjct: 108 HSQIEKTLDRVGLTSSKHKKVKSFSLGMKQRLGIAMALLHQPKLLLLDEPTNGLDPEGIQ 167
Query: 184 FVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRI-----------------I 226
+RELI+ L ++E TV +++H + E +++ ++ +I HG + +
Sbjct: 168 EMRELIRDLPKKEGVTVFVSSHLLGEIDQVASQVGVIYHGSLLYQGQKNDLLASHGGTTV 227
Query: 227 ALDTPEGLKKLVRKDTIVEVRVKNYNGENPFGLAKIKEEGEKVVLRGPLDEEDIPKLVEF 286
++ TPE KD + ++ V E I+ + +++++ GP +++ +V
Sbjct: 228 SVHTPE-------KDKVEQLLVM----EGFHVQKSIRHKEDEIMITGPHVTKEV--IVML 274
Query: 287 LVKNNAKVLSVEVKEPTLEDVFIKLTG 313
L + + V+ TLED ++ L G
Sbjct: 275 LQREGIQNYYVQEHHRTLEDAYMALIG 301
>pir||S71363 probable ATP-binding cassette transporter ABC-3 - human
>gi|1514530|emb|CAA65825.1| (X97187) ABC-C transporter
[Homo sapiens]
Length = 1704
Score = 137 bits (341), Expect = 2e-31
Identities = 74/197 (37%), Positives = 127/197 (63%), Gaps = 3/197 (1%)
Query: 29 ALKGITFNVKKGELFGLLGPNGAGKTTTIKILTTLLEPTSGEARVLGFDIVKEAREIRKR 88
A++ + N+ +G++ LLG NGAGKTTT+ +LT L PTSG A + G++I ++ +IRK
Sbjct: 548 AVRDLNLNLYEGQITVLLGHNGAGKTTTLSMLTGLFPPTSGRAYISGYEISQDMVQIRKS 607
Query: 89 INLVAEGERTLYWRLTAYENLRYFASIYYVPKKVAEERIRNLLHMVGLWDRKDDLVMNYS 148
+ L + + L+ LT E+L ++A + + ++ E ++ +LH++GL D+ + S
Sbjct: 608 LGLCPQHD-ILFDNLTVAEHLYFYAQLKGLSRQKCPEEVKQMLHIIGLEDKWNSRSRFLS 666
Query: 149 RGMKQRLAIAKALINDPEVLFLDEPTLGLDVQSAIFVRELIKKLVEEEKKTVLLTTHYMH 208
GM+++L+I ALI +VL LDEPT G+D S + +L+++ ++ +T++LTTH+M
Sbjct: 667 GGMRRKLSIGIALIAGSKVLILDEPTSGMDAISRRAIWDLLQR--QKSDRTIVLTTHFMD 724
Query: 209 EAEELCDRIAIIDHGRI 225
EA+ L DRIAI+ G +
Sbjct: 725 EADLLGDRIAIMAKGEL 741
Score = 131 bits (326), Expect = 1e-29
Identities = 82/230 (35%), Positives = 129/230 (55%), Gaps = 10/230 (4%)
Query: 6 VKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKILTTLLE 65
+K L K+Y +++PL A+ ++ V+KGE FGLLG NGAGKTTT K+LT
Sbjct: 1383 IKELSKVYEQRVPLL--------AVDRLSLAVQKGECFGLLGFNGAGKTTTFKMLTGEES 1434
Query: 66 PTSGEARVLGFDIVKEAREIRKRINLVAEGERTLYWRLTAYENLRYFASIYYVPKKVAEE 125
TSG+A V G I + ++R+RI + + L +T E L +A + +P++
Sbjct: 1435 LTSGDAFVGGHRISSDVGKVRQRIGYCPQFD-ALLDHMTGREMLVMYARLRGIPERHIGA 1493
Query: 126 RIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQSAIFV 185
+ N L + L + LV YS G K++L+ ALI +P V+FLDEP+ G+D + +
Sbjct: 1494 CVENTLRGLLLEPHANKLVRTYSGGNKRKLSTGIALIGEPAVIFLDEPSTGMDPVARRLL 1553
Query: 186 RELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRIIALDTPEGLK 235
+ + + E K +++T+H M E E LC R+AI+ G+ L +P+ LK
Sbjct: 1554 WDTVAR-ARESGKAIIITSHSMEECEALCTRLAIMVQGQFKCLGSPQHLK 1602
>gi|4501849 ATP-binding cassette, sub-family A member 3; ATP-binding cassette
3; ABC transporter 3 [Homo sapiens]
>gi|7387524|sp|Q99758|ABC3_HUMAN ATP-BINDING CASSETTE,
SUB-FAMILY A, MEMBER 3 (ATP-BINDING CASSETTE TRANSPORTER
3) (ATP-BINDING CASSETTE 3) (ABC-C TRANSPORTER)
>gi|11278926|pir||A59188 ATP-binding cassette
transporter ABC3 - human >gi|1699038|gb|AAC50967.1|
(U78735) ABC3 [Homo sapiens]
Length = 1704
Score = 137 bits (341), Expect = 2e-31
Identities = 74/197 (37%), Positives = 127/197 (63%), Gaps = 3/197 (1%)
Query: 29 ALKGITFNVKKGELFGLLGPNGAGKTTTIKILTTLLEPTSGEARVLGFDIVKEAREIRKR 88
A++ + N+ +G++ LLG NGAGKTTT+ +LT L PTSG A + G++I ++ +IRK
Sbjct: 548 AVRDLNLNLYEGQITVLLGHNGAGKTTTLSMLTGLFPPTSGRAYISGYEISQDMVQIRKS 607
Query: 89 INLVAEGERTLYWRLTAYENLRYFASIYYVPKKVAEERIRNLLHMVGLWDRKDDLVMNYS 148
+ L + + L+ LT E+L ++A + + ++ E ++ +LH++GL D+ + S
Sbjct: 608 LGLCPQHD-ILFDNLTVAEHLYFYAQLKGLSRQKCPEEVKQMLHIIGLEDKWNSRSRFLS 666
Query: 149 RGMKQRLAIAKALINDPEVLFLDEPTLGLDVQSAIFVRELIKKLVEEEKKTVLLTTHYMH 208
GM+++L+I ALI +VL LDEPT G+D S + +L+++ ++ +T++LTTH+M
Sbjct: 667 GGMRRKLSIGIALIAGSKVLILDEPTSGMDAISRRAIWDLLQR--QKSDRTIVLTTHFMD 724
Query: 209 EAEELCDRIAIIDHGRI 225
EA+ L DRIAI+ G +
Sbjct: 725 EADLLGDRIAIMAKGEL 741
Score = 131 bits (326), Expect = 1e-29
Identities = 82/230 (35%), Positives = 129/230 (55%), Gaps = 10/230 (4%)
Query: 6 VKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKILTTLLE 65
+K L K+Y +++PL A+ ++ V+KGE FGLLG NGAGKTTT K+LT
Sbjct: 1383 IKELSKVYEQRVPLL--------AVDRLSLAVQKGECFGLLGFNGAGKTTTFKMLTGEES 1434
Query: 66 PTSGEARVLGFDIVKEAREIRKRINLVAEGERTLYWRLTAYENLRYFASIYYVPKKVAEE 125
TSG+A V G I + ++R+RI + + L +T E L +A + +P++
Sbjct: 1435 LTSGDAFVGGHRISSDVGKVRQRIGYCPQFD-ALLDHMTGREMLVMYARLRGIPERHIGA 1493
Query: 126 RIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQSAIFV 185
+ N L + L + LV YS G K++L+ ALI +P V+FLDEP+ G+D + +
Sbjct: 1494 CVENTLRGLLLEPHANKLVRTYSGGNKRKLSTGIALIGEPAVIFLDEPSTGMDPVARRLL 1553
Query: 186 RELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRIIALDTPEGLK 235
+ + + E K +++T+H M E E LC R+AI+ G+ L +P+ LK
Sbjct: 1554 WDTVAR-ARESGKAIIITSHSMEECEALCTRLAIMVQGQFKCLGSPQHLK 1602
>pir||T07714 probable ABC-type transport protein T23J7.80 - Arabidopsis thaliana
>gi|4741192|emb|CAB41858.1| (AL049746) ABC
transporter-like protein [Arabidopsis thaliana]
Length = 895
Score = 137 bits (341), Expect = 2e-31
Identities = 103/322 (31%), Positives = 165/322 (50%), Gaps = 22/322 (6%)
Query: 3 AIEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKILTT 62
AI L+K+YP + P + A+ G++ V GE FG+LGPNGAGKT+ I ++T
Sbjct: 572 AIVCDKLKKVYPGRDGNPPKM-----AVGGLSIAVPPGECFGMLGPNGAGKTSFINMMTG 626
Query: 63 LLEPTSGEARVLGFDIVKEAREIRKRINLVAEGERTLYWRLTAYENLRYFASIYYVPKKV 122
L++PTSG A V DI ++ ++ + + + + L+ LT E+L ++ + +
Sbjct: 627 LVKPTSGTALVESLDICQDMDKVYTSMGVCPQHD-LLWETLTGREHLLFYGRLKNLKGSD 685
Query: 123 AEERIRNLLHMVGLWDR--KDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQ 180
+ I L V L D YS GMK+RL++A +LI P+V+++DEP+ GLD
Sbjct: 686 LNQAIEESLKSVNLSREGVADKPAGKYSGGMKRRLSVAISLIGSPKVVYMDEPSTGLDPA 745
Query: 181 SAIFVRELIKKLVEEEKKT-VLLTTHYMHEAEELCDRIAIIDHGRIIALDTPEGLKKLVR 239
S R L + +K T ++LTTH M EAE LCDR+ I GR+ + P+ LK
Sbjct: 746 SR---RSLWTAIKGAKKHTAIILTTHSMEEAEFLCDRLGIFVDGRLQCVGNPKELKARYG 802
Query: 240 KDTIVEVRVKNYNGENPFGLAKIKEEGEKVV--------LRGPLDEEDIPKLVEFL--VK 289
++ + + + ++ L + K + P DE I +L + + K
Sbjct: 803 GSYVLTMTTSSEHEKDVEMLIQDVSPNAKKIYHIAGTQKFEIPKDEVRIAELFQAVEKAK 862
Query: 290 NNAKVLSVEVKEPTLEDVFIKL 311
N +V + + + TLEDVFIK+
Sbjct: 863 GNFRVFAWGLADTTLEDVFIKV 884
>gi|11431125 ATP-binding cassette, sub-family A member 3 [Homo sapiens]
Length = 1704
Score = 137 bits (341), Expect = 2e-31
Identities = 74/197 (37%), Positives = 127/197 (63%), Gaps = 3/197 (1%)
Query: 29 ALKGITFNVKKGELFGLLGPNGAGKTTTIKILTTLLEPTSGEARVLGFDIVKEAREIRKR 88
A++ + N+ +G++ LLG NGAGKTTT+ +LT L PTSG A + G++I ++ +IRK
Sbjct: 548 AVRDLNLNLYEGQITVLLGHNGAGKTTTLSMLTGLFPPTSGRAYISGYEISQDMVQIRKS 607
Query: 89 INLVAEGERTLYWRLTAYENLRYFASIYYVPKKVAEERIRNLLHMVGLWDRKDDLVMNYS 148
+ L + + L+ LT E+L ++A + + ++ E ++ +LH++GL D+ + S
Sbjct: 608 LGLCPQHD-ILFDNLTVAEHLYFYAQLKGLSRQKCPEEVKQMLHIIGLEDKWNSRSRFLS 666
Query: 149 RGMKQRLAIAKALINDPEVLFLDEPTLGLDVQSAIFVRELIKKLVEEEKKTVLLTTHYMH 208
GM+++L+I ALI +VL LDEPT G+D S + +L+++ ++ +T++LTTH+M
Sbjct: 667 GGMRRKLSIGIALIAGSKVLILDEPTSGMDAISRRAIWDLLQR--QKSDRTIVLTTHFMD 724
Query: 209 EAEELCDRIAIIDHGRI 225
EA+ L DRIAI+ G +
Sbjct: 725 EADLLGDRIAIMAKGEL 741
Score = 131 bits (326), Expect = 1e-29
Identities = 82/230 (35%), Positives = 129/230 (55%), Gaps = 10/230 (4%)
Query: 6 VKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKILTTLLE 65
+K L K+Y +++PL A+ ++ V+KGE FGLLG NGAGKTTT K+LT
Sbjct: 1383 IKELSKVYEQRVPLL--------AVDRLSLAVQKGECFGLLGFNGAGKTTTFKMLTGEES 1434
Query: 66 PTSGEARVLGFDIVKEAREIRKRINLVAEGERTLYWRLTAYENLRYFASIYYVPKKVAEE 125
TSG+A V G I + ++R+RI + + L +T E L +A + +P++
Sbjct: 1435 LTSGDAFVGGHRISSDVGKVRQRIGYCPQFD-ALLDHMTGREMLVMYARLRGIPERHIGA 1493
Query: 126 RIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQSAIFV 185
+ N L + L + LV YS G K++L+ ALI +P V+FLDEP+ G+D + +
Sbjct: 1494 CVENTLRGLLLEPHANKLVRTYSGGNKRKLSTGIALIGEPAVIFLDEPSTGMDPVARRLL 1553
Query: 186 RELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRIIALDTPEGLK 235
+ + + E K +++T+H M E E LC R+AI+ G+ L +P+ LK
Sbjct: 1554 WDTVAR-ARESGKAIIITSHSMEECEALCTRLAIMVQGQFKCLGSPQHLK 1602
>gb|AAG21390.1|AF302051_4 (AF302051) ABC transporter ATP binding subunit [Bacillus
licheniformis]
Length = 299
Score = 136 bits (340), Expect = 3e-31
Identities = 87/293 (29%), Positives = 153/293 (51%), Gaps = 20/293 (6%)
Query: 29 ALKGITFNVKKGELFGLLGPNGAGKTTTIKILTTLLEPTSGEARVLGFDIVKEAREIRKR 88
A+ I F++KKGE+ +LGPNGAGKTTTI ++ LL+PT+G + FD + + +R++
Sbjct: 19 AVDQIDFSIKKGEIVAILGPNGAGKTTTISMILGLLKPTAGNITL--FDSMPHEKRVREK 76
Query: 89 INLVAEGERTLYWRLTAYENLRYFASIYYVPKKVAEERIRNLLHMVGLWDRK-DDLVMNY 147
I + + + E + S Y PK ++ +++R L GL D+
Sbjct: 77 IGTMLQEVSVMPGLRCRVEIIELIRS--YYPKPLSFQKLRTL---TGLTDKDLKTQAEKL 131
Query: 148 SRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQSAIFVRELIKKLVEEEKKTVLLTTHYM 207
S G K+RL A AL DPE++ DEPT+G+D+ S + ++ L E+ KT++ +THY+
Sbjct: 132 SGGQKRRLGFALALAGDPELMIFDEPTVGMDITSRNRFWQTVQSLA-EQGKTIIFSTHYL 190
Query: 208 HEAEELCDRIAIIDHGRIIALDTPEGLKKLVRKDTIVEVRVKNYNGENPFGLAKIKEEGE 267
EA++ RI + G+I+A TP +K + K ++ ++ + L K+ + E
Sbjct: 191 QEADDAAQRILLFKDGKIVADGTPLQIKSRISKHSV------SFIVDPEQSLEKLYQHPE 244
Query: 268 KVVL-----RGPLDEEDIPKLVEFLVKNNAKVLSVEVKEPTLEDVFIKLTGRG 315
+ R +D + K++E + ++++ LE+ F +LT +G
Sbjct: 245 TEQIFRKNNRVYIDTANTDKILELIFSEKIGAYDIQIERGNLEEAFRQLTSKG 297
>sp|P44785|ABC_HAEIN ATP-BINDING PROTEIN ABC >gi|1073885|pir||C64082 ATP-binding protein
homolog HI0621 - Haemophilus influenzae (strain Rd
KW20) >gi|1573615|gb|AAC22280.1| (U32744) ABC
transporter, ATP-binding protein [Haemophilus influenzae
Rd]
Length = 345
Score = 135 bits (337), Expect = 6e-31
Identities = 81/231 (35%), Positives = 138/231 (59%), Gaps = 12/231 (5%)
Query: 4 IEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKILTTL 63
I++ N+ K++ LP +K+ AL ++ N++KG++ G++G +GAGK+T I+ + L
Sbjct: 2 IKLNNIXKIFE----LPXKKLT---ALDNVSLNIEKGQICGVIGASGAGKSTLIRCVNLL 54
Query: 64 LEPTSGEARVLGFDIVKEA-REI---RKRINLVAEGERTLYWRLTAYENLRYFASIYYVP 119
+PTSG V G ++ K + RE+ R++I ++ + L R T +EN+ +
Sbjct: 55 EKPTSGSVIVDGVELTKLSDRELVLARRQIGMIFQHFNLLSSR-TVFENVALPLELESES 113
Query: 120 KKVAEERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDV 179
K +E+I LL +VGL +++D N S G KQR+AIA+AL +DP+VL DE T LD
Sbjct: 114 KAKIQEKITALLDLVGLSEKRDAYPSNLSGGQKQRVAIARALASDPKVLLCDEATSALDP 173
Query: 180 QSAIFVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRIIALDT 230
+ + +L+K++ T+LL TH M +++CD++A+ID GR++ T
Sbjct: 174 ATTQSILKLLKEINRTLGITILLITHEMEVVKQICDQVAVIDQGRLVEQGT 224
>dbj|BAB16596.1| (AB037937) ABC2 [Rattus norvegicus]
Length = 2434
Score = 135 bits (337), Expect = 6e-31
Identities = 101/317 (31%), Positives = 164/317 (50%), Gaps = 19/317 (5%)
Query: 4 IEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKILTTL 63
++++NL K+Y RKI A+ + V+ GE FGLLG NGAGKT+T K+LT
Sbjct: 2051 VKIENLTKVYKS------RKIGRILAVDRLCLGVRPGECFGLLGVNGAGKTSTFKMLTGD 2104
Query: 64 LEPTSGEARVLGFDIVKEAREIRKRINLVAEGERTLYWRLTAYENLRYFASIYYVPKKVA 123
T GEA V G ++K+ ++++ + + + L+ LTA E+L+ + + +P K
Sbjct: 2105 ESTTGGEAFVNGHSVLKDLLQVQQSLGYCPQFD-ALFDELTAREHLQLYTRLRGIPWKDE 2163
Query: 124 EERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQSAI 183
+ +R L + L D +YS G K++L+ A ALI P +FLDEPT G+D ++
Sbjct: 2164 AQVVRWALEKLELTKCADKPAGSYSGGNKRKLSTAIALIGYPAFIFLDEPTTGMDPKARR 2223
Query: 184 FVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRIIALDTPEGLKKLVRKDTI 243
F+ LI L+ + ++V+LT+H M E E +C R+AI+ +GR+ L + + LK +
Sbjct: 2224 FLWNLILDLI-KTGRSVVLTSHSMEECEAVCTRLAIMVNGRLRCLGSIQHLKNRFGDGYM 2282
Query: 244 VEVRVKNYNG--------ENPFGLAKIKEEGEKVVLRGPLDEEDIPKLVEFLVKNNAKVL 295
+ VR K+ F A +KE V E V +++ VL
Sbjct: 2283 ITVRTKSSQNVKDVVRFFNRNFPEAMLKERHHTKVQYQLKSEHISLAQVFSKMEHVVGVL 2342
Query: 296 SVE---VKEPTLEDVFI 309
+E V + TL++VF+
Sbjct: 2343 GIEDYSVSQTTLDNVFV 2359
Score = 132 bits (330), Expect = 4e-30
Identities = 80/211 (37%), Positives = 125/211 (58%), Gaps = 11/211 (5%)
Query: 29 ALKGITFNVKKGELFGLLGPNGAGKTTTIKILTTLLEPTSGEARVLGFDIVKEAREIRKR 88
AL ++ N+ + ++ LG NGAGKTTT+ ILT L PTSG A + G DI E EIRK
Sbjct: 1006 ALNKLSLNLYENQVVSFLGHNGAGKTTTMSILTGLFPPTSGSATIYGHDIRTEMDEIRKN 1065
Query: 89 INLVAEGERTLYWRLTAYENLRYFASIYYVPKKVAEERIR----NLLHMVGLWDRKDDLV 144
+ + + L+ +LT E+L +++ + K +A+E IR ++ + L +++ LV
Sbjct: 1066 LGMCPQ-HNVLFDQLTVEEHLWFYSRL----KSMAQEEIRKEMDKMIEDLELSNKRHSLV 1120
Query: 145 MNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQSAIFVRELIKKLVEEEKKTVLLTT 204
S GMK++L++A A + + LDEPT G+D + + +LI K + +T+LL+T
Sbjct: 1121 QTLSGGMKRKLSVAIAFVGGSRAIILDEPTAGVDPYARRAIWDLILKY--KPGRTILLST 1178
Query: 205 HYMHEAEELCDRIAIIDHGRIIALDTPEGLK 235
H+M EA+ L DRIAII HG++ +P LK
Sbjct: 1179 HHMDEADLLGDRIAIISHGKLKCCGSPLFLK 1209
>pir||A59189 ATP-binding cassette transporter - human (fragment)
>gi|5689461|dbj|BAA83014.1| (AB028985) KIAA1062 protein
[Homo sapiens]
Length = 1529
Score = 134 bits (334), Expect = 1e-30
Identities = 81/211 (38%), Positives = 125/211 (58%), Gaps = 11/211 (5%)
Query: 29 ALKGITFNVKKGELFGLLGPNGAGKTTTIKILTTLLEPTSGEARVLGFDIVKEAREIRKR 88
AL ++ N+ + ++ LG NGAGKTTT+ ILT L PTSG A + G DI E EIRK
Sbjct: 100 ALNKLSLNLYENQVVSFLGHNGAGKTTTMSILTGLFPPTSGSATIYGHDIRTEMDEIRKN 159
Query: 89 INLVAEGERTLYWRLTAYENLRYFASIYYVPKKVAEERIR----NLLHMVGLWDRKDDLV 144
+ + + L+ RLT E+L +++ + K +A+E IR ++ + L +++ LV
Sbjct: 160 LGMCPQ-HNVLFDRLTVEEHLWFYSRL----KSMAQEEIRREMDKMIEDLELSNKRHSLV 214
Query: 145 MNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQSAIFVRELIKKLVEEEKKTVLLTT 204
S GMK++L++A A + + LDEPT G+D + + +LI K + +T+LL+T
Sbjct: 215 QTLSGGMKRKLSVAIAFVGGSRAIILDEPTAGVDPYARRAIWDLILKY--KPGRTILLST 272
Query: 205 HYMHEAEELCDRIAIIDHGRIIALDTPEGLK 235
H+M EA+ L DRIAII HG++ +P LK
Sbjct: 273 HHMDEADLLGDRIAIISHGKLKCCGSPLFLK 303
Score = 132 bits (330), Expect = 4e-30
Identities = 101/317 (31%), Positives = 161/317 (49%), Gaps = 19/317 (5%)
Query: 4 IEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKILTTL 63
++++NL K+Y RKI A+ + V+ GE FGLLG NGAGKT+T K+LT
Sbjct: 1144 VKIENLTKVYKS------RKIGRILAVDRLCLGVRPGECFGLLGVNGAGKTSTFKMLTGD 1197
Query: 64 LEPTSGEARVLGFDIVKEAREIRKRINLVAEGERTLYWRLTAYENLRYFASIYYVPKKVA 123
T GEA V G ++KE ++++ + + + L+ LTA E+L+ + + + K
Sbjct: 1198 ESTTGGEAFVNGHSVLKELLQVQQSLGYCPQCD-ALFDELTAREHLQLYTRLRGISWKDE 1256
Query: 124 EERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQSAI 183
++ L + L D YS G K++L+ A ALI P +FLDEPT G+D ++
Sbjct: 1257 ARVVKWALEKLELTKYADKPAGTYSGGNKRKLSTAIALIGYPAFIFLDEPTTGMDPKARR 1316
Query: 184 FVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRIIALDTPEGLKKLVRKDTI 243
F+ LI L+ + ++V+LT+H M E E LC R+AI+ +GR+ L + + LK +
Sbjct: 1317 FLWNLILDLI-KTGRSVVLTSHSMEECEALCTRLAIMVNGRLRCLGSIQHLKNRFGDGYM 1375
Query: 244 VEVRVKNYNG--------ENPFGLAKIKEEGEKVVLRGPLDEEDIPKLVEFLVKNNAKVL 295
+ VR K+ F A +KE V E V ++ + VL
Sbjct: 1376 ITVRTKSSQSVKDVVRFFNRNFPEAMLKERHHTKVQYQLKSEHISLAQVFSKMEQVSGVL 1435
Query: 296 SVE---VKEPTLEDVFI 309
+E V + TL++VF+
Sbjct: 1436 GIEDYSVSQTTLDNVFV 1452
>gb|AAG09372.1|AF178941_1 (AF178941) ATP-binding cassette sub-family A member 2 [Homo sapiens]
Length = 2436
Score = 134 bits (334), Expect = 1e-30
Identities = 81/211 (38%), Positives = 125/211 (58%), Gaps = 11/211 (5%)
Query: 29 ALKGITFNVKKGELFGLLGPNGAGKTTTIKILTTLLEPTSGEARVLGFDIVKEAREIRKR 88
AL ++ N+ + ++ LG NGAGKTTT+ ILT L PTSG A + G DI E EIRK
Sbjct: 1007 ALNKLSLNLYENQVVSFLGHNGAGKTTTMSILTGLFPPTSGSATIYGHDIRTEMDEIRKN 1066
Query: 89 INLVAEGERTLYWRLTAYENLRYFASIYYVPKKVAEERIR----NLLHMVGLWDRKDDLV 144
+ + + L+ RLT E+L +++ + K +A+E IR ++ + L +++ LV
Sbjct: 1067 LGMCPQ-HNVLFDRLTVEEHLWFYSRL----KSMAQEEIRREMDKMIEDLELSNKRHSLV 1121
Query: 145 MNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQSAIFVRELIKKLVEEEKKTVLLTT 204
S GMK++L++A A + + LDEPT G+D + + +LI K + +T+LL+T
Sbjct: 1122 QTLSGGMKRKLSVAIAFVGGSRAIILDEPTAGVDPYARRAIWDLILKY--KPGRTILLST 1179
Query: 205 HYMHEAEELCDRIAIIDHGRIIALDTPEGLK 235
H+M EA+ L DRIAII HG++ +P LK
Sbjct: 1180 HHMDEADLLGDRIAIISHGKLKCCGSPLFLK 1210
Score = 132 bits (330), Expect = 4e-30
Identities = 101/317 (31%), Positives = 161/317 (49%), Gaps = 19/317 (5%)
Query: 4 IEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKILTTL 63
++++NL K+Y RKI A+ + V+ GE FGLLG NGAGKT+T K+LT
Sbjct: 2051 VKIENLTKVYKS------RKIGRILAVDRLCLGVRPGECFGLLGVNGAGKTSTFKMLTGD 2104
Query: 64 LEPTSGEARVLGFDIVKEAREIRKRINLVAEGERTLYWRLTAYENLRYFASIYYVPKKVA 123
T GEA V G ++KE ++++ + + + L+ LTA E+L+ + + + K
Sbjct: 2105 ESTTGGEAFVNGHSVLKELLQVQQSLGYCPQCD-ALFDELTAREHLQLYTRLRGISWKDE 2163
Query: 124 EERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQSAI 183
++ L + L D YS G K++L+ A ALI P +FLDEPT G+D ++
Sbjct: 2164 ARVVKWALEKLELTKYADKPAGTYSGGNKRKLSTAIALIGYPAFIFLDEPTTGMDPKARR 2223
Query: 184 FVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRIIALDTPEGLKKLVRKDTI 243
F+ LI L+ + ++V+LT+H M E E LC R+AI+ +GR+ L + + LK +
Sbjct: 2224 FLWNLILDLI-KTGRSVVLTSHSMEECEALCTRLAIMVNGRLRCLGSIQHLKNRFGDGYM 2282
Query: 244 VEVRVKNYNG--------ENPFGLAKIKEEGEKVVLRGPLDEEDIPKLVEFLVKNNAKVL 295
+ VR K+ F A +KE V E V ++ + VL
Sbjct: 2283 ITVRTKSSQSVKDVVRFFNRNFPEAMLKERHHTKVQYQLKSEHISLAQVFSKMEQVSGVL 2342
Query: 296 SVE---VKEPTLEDVFI 309
+E V + TL++VF+
Sbjct: 2343 GIEDYSVSQTTLDNVFV 2359
>gb|AAC36155.1| (AF003632) PilH [Myxococcus xanthus]
Length = 326
Score = 134 bits (333), Expect = 2e-30
Identities = 95/310 (30%), Positives = 161/310 (51%), Gaps = 14/310 (4%)
Query: 4 IEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKILTTL 63
+ ++ L K Y + F + +AL+G+ + G+++GLLGPNGAGK+TTIKIL L
Sbjct: 13 VSIRGLSKTYK----VGFFLNKQVKALQGLDLEIAPGQVYGLLGPNGAGKSTTIKILMGL 68
Query: 64 LEPTSGEARVLGFDIVKEAREIRKRINLVAEGERTLYWRLTAYENLRYFASIYYVPKKVA 123
+ + G+A + G + +R+++ + E +LY LT E + I+ +
Sbjct: 69 VRASEGQALLFGEP--PDRPHVRRQVGFLPENP-SLYEYLTGREFVTLAGRIFGLSGHEL 125
Query: 124 EERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQSAI 183
++R+ +L VG+ D + YS+GM QR A+A+ALI+ P +L LDEPT GLD
Sbjct: 126 DQRVERVLGDVGMGRASDLQIRRYSKGMVQRTALAQALISGPRLLVLDEPTSGLDPLGRR 185
Query: 184 FVRELIKKLVEEEK-KTVLLTTHYMHEAEELCDRIAIIDHGRIIALDTPEGL--KKLVRK 240
+R+LI L E K T+L TH + + E LCDR+ ++ GR + + + L K
Sbjct: 186 QMRDLI--LAERAKGTTILFCTHIISDVESLCDRVVVLVGGRRVQEGSVQDLVSAKAPSV 243
Query: 241 DTIVEVRVKNYNGENPFGLAKIKEEGEKVVLRGPLDEEDIPKLVEFLVKNNAKVLSVEVK 300
+ +V F ++ +V+LR P + D L++ ++ +V V+
Sbjct: 244 EMVVHGLPLEVLQSLGFSYEHAQQLDSRVLLRIP--DADSHGLLQTVISKGGRVSRVQPA 301
Query: 301 EPTLEDVFIK 310
+LED+F++
Sbjct: 302 RFSLEDLFLE 311
>pir||A75083 ATP-binding transport protein PAB1668 - Pyrococcus abyssi (strain
Orsay) >gi|5458478|emb|CAB49966.1| (AJ248286)
ATP-BINDING TRANSPORT PROTEIN [Pyrococcus abyssi]
Length = 315
Score = 133 bits (332), Expect = 2e-30
Identities = 98/325 (30%), Positives = 157/325 (48%), Gaps = 28/325 (8%)
Query: 4 IEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKILTTL 63
IE K L K + K+ + + V KG ++G LGPNGAGKTTTIK+LT
Sbjct: 6 IETKELTKFFGKR-----------NVVYNLNLKVPKGAVYGFLGPNGAGKTTTIKMLTGA 54
Query: 64 LEPTSGEARVLGFDIVKEAREIRKRINLVAEGERTLYWRLTAYENLRYFASIYYVPKKVA 123
L+PT GE +++G ++ +E +I + + + E Y +T +E L Y + +PK A
Sbjct: 55 LKPTYGEIKIIGMEMPRERVKIMRNVGYMPE-RPLAYDDMTIFEFLVYMGRLLGLPKDKA 113
Query: 124 EERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQSAI 183
+ R L+ G+ + + S G +QR+ A AL+ DPE+L LDEPT LD +
Sbjct: 114 VNQARELMAYTGVGRLAFNKIEELSSGQRQRVLFASALMGDPELLILDEPTSNLDPLGRM 173
Query: 184 FVRELIKKLVEEEK--KTVLLTTHYMHEAEELCDRIAIIDHGRIIALDTPEGLKKLVRKD 241
E I K++E K KTV +++H + E E +C+ + +I G++I L K+ D
Sbjct: 174 ---EFIGKILELAKSGKTVFISSHIVSEIERMCNYVGLIKDGQLIEQGKVRDLAKIESTD 230
Query: 242 TIVEV----RVKNYNGENPFGLAKIKEEGEKVVLRGPLDEEDIPK----LVEFLVKNNAK 293
V V ++ + + + +EEG ++R LDE K L FL
Sbjct: 231 YDVVVSDNEKLLKFLRDKIYVREVWEEEG---IVRVKLDERFSEKFFLELPAFLASEKLA 287
Query: 294 VLSVEVKEPTLEDVFIKLTGRGLRD 318
+ + LE + +K G ++
Sbjct: 288 IKLFKPHTSPLERILMKRFNMGWKN 312
>dbj|BAB08166.1| (AB030831) SrtF [Streptococcus pyogenes]
Length = 229
Score = 133 bits (331), Expect = 3e-30
Identities = 92/251 (36%), Positives = 137/251 (53%), Gaps = 31/251 (12%)
Query: 4 IEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKILTTL 63
++++NL+K Y K+ L + N+ KG+++ L+GPNGAGK+T +KILT L
Sbjct: 2 LKIQNLKKSYGKRT-----------ILNNVNMNIPKGKVYALIGPNGAGKSTIMKILTGL 50
Query: 64 LEPTSGEARVLGFDIVKEAREIRKR----INLVAEGERTLYWRLTAYENLRYFASIYYVP 119
+ TSG I+ E RE +R I + E E LY L+AY+N++ ++
Sbjct: 51 VSKTSGS-------IIFEGREWSRRDLRKIGSIIE-EPPLYKNLSAYDNMKVVTTML--- 99
Query: 120 KKVAEERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDV 179
V+E I LL+ VGL + V +S GMKQRL IA +LIN P++L LDEPT GLD
Sbjct: 100 -GVSESTILPLLNKVGLGNIDKRPVKQFSLGMKQRLGIAISLINSPKLLILDEPTNGLDP 158
Query: 180 QSAIFVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRII---ALDTPEGLKK 236
+RE+I+ + E T+++++H + E E L D I I G+II D E L++
Sbjct: 159 IGIQELREIIESF-KSEGMTIMISSHILSEVEHLADFIGFIYEGKIILEKEYDGSENLEE 217
Query: 237 LVRKDTIVEVR 247
L + E R
Sbjct: 218 LFNNQILFEKR 228
>pir||D70020 ABC transporter (ATP-binding protein) homolog yusC - Bacillus
subtilis >gi|2635771|emb|CAB15264.1| (Z99120) similar to
ABC transporter (ATP-binding protein) [Bacillus
subtilis]
Length = 341
Score = 131 bits (326), Expect = 1e-29
Identities = 87/298 (29%), Positives = 153/298 (51%), Gaps = 14/298 (4%)
Query: 29 ALKGITFNVKKGELFGLLGPNGAGKTTTIKILTTLLEPTSGEARVLGFDIV----KEARE 84
A++ ++ ++KKGE+FG++G +GAGK++ I++L L +PTSG V G I + R+
Sbjct: 20 AVQNVSLSIKKGEIFGIIGYSGAGKSSLIRLLNGLEKPTSGTVEVAGTKINEVNGRGLRK 79
Query: 85 IRKRINLVAEGERTLYWRLTAYENLRYFASIYYVPKKVAEERIRNLLHMVGLWDRKDDLV 144
R I+++ + L W T +N+ + I V K +R L+ +VGL ++
Sbjct: 80 ARHEISMIFQ-HFNLLWSRTVRDNIMFPLEIAGVKKSERIKRANELIKLVGLEGKEKSYP 138
Query: 145 MNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQSAIFVRELIKKLVEEEKKTVLLTT 204
S G KQR+ IA+AL N+P+VL DE T LD Q+ + +L+ + E T++L T
Sbjct: 139 SQLSGGQKQRVGIARALANNPKVLLCDEATSALDPQTTDSILDLLSDINERLGLTIVLIT 198
Query: 205 HYMHEAEELCDRIAIIDHGRII----ALDTPEGLKKLVRKDTIVEVRVKNYNGENPFGLA 260
H MH ++C+R+A++++G+++ LD + K+ + K + +V E L
Sbjct: 199 HEMHVIRKICNRVAVMENGKVVEEGEVLDVFKNPKEQMTKRFVQQVTEPEETKETLQHLL 258
Query: 261 KIKEEGEKVVLRGPLDEEDIPKLVEFLVKNNAKVLSVEVKEPTLED-----VFIKLTG 313
G+ V L + + P + E + N V ++ K +D +FI + G
Sbjct: 259 DDTASGKMVQLTFVGESAEQPLITEMIRNFNVSVNILQGKISQTKDGAYGSLFIHIDG 316
>pir||T36523 probable ABC-type transport system ATP-binding protein -
Streptomyces coelicolor >gi|4753857|emb|CAB42020.1|
(AL049754) putative ABC transporter ATP-binding protein
[Streptomyces coelicolor A3(2)]
Length = 311
Score = 131 bits (326), Expect = 1e-29
Identities = 101/312 (32%), Positives = 159/312 (50%), Gaps = 28/312 (8%)
Query: 2 KAIEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKILT 61
KAI V L K + + AL G+ V+ GE+ G LGPNGAGK+TTI++L
Sbjct: 3 KAISVSGLHKSFGRT-----------HALDGLDLEVETGEVHGFLGPNGAGKSTTIRVLL 51
Query: 62 TLLEPTSGEARVLGFDIVKEAREIRKRINLVAEGERTLYWRLTAYENLRYFASIYYVPKK 121
LL +G A+VLG D +A E +RI V G+ TL+ L+ E + + +
Sbjct: 52 GLLRADAGAAQVLGRDPWADAVEAHRRIAYV-PGDVTLWRNLSGGEVIDLYGRL---RGG 107
Query: 122 VAEERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQS 181
+ R L+ L K YS+G +Q++A+ A +D ++L LDEPT GLD
Sbjct: 108 LDTRRRAELVERFELDPTKKG--RTYSKGNRQKVALVAAFASDVDLLILDEPTSGLDP-- 163
Query: 182 AIFVRELIKKLVEEEK---KTVLLTTHYMHEAEELCDRIAIIDHGRIIALDTPEGLKKLV 238
+ E+ ++ VEEE+ +TVLL++H + E EELCDR++II GR + + L+ L
Sbjct: 164 --LMEEVFQRCVEEERERGRTVLLSSHILSEVEELCDRVSIIRKGRTVESGSLADLRHLT 221
Query: 239 RKDTIVEVRVKNYNGENPFGLAKIKEEGEKVVLRGPLDEEDIPKLVEFLVKNNAKVLSVE 298
R E+ G+ + G +V L+ +D + + ++ L + V S+
Sbjct: 222 RTSVTAELAGAPNGLTRLPGVHGLDVRGHRVRLQ--VDTDKLDAVLRSL--SETGVRSLT 277
Query: 299 VKEPTLEDVFIK 310
PTLE++F++
Sbjct: 278 STPPTLEELFLR 289
>pir||T07712 probable ABC-type transport protein T23J7.60 - Arabidopsis thaliana
>gi|4741190|emb|CAB41856.1| (AL049746) ABC-type
transport-like protein [Arabidopsis thaliana]
Length = 1011
Score = 131 bits (325), Expect = 1e-29
Identities = 100/286 (34%), Positives = 141/286 (48%), Gaps = 35/286 (12%)
Query: 3 AIEVKNLRKLYPKKIPL---PFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKI 59
A++++ L K YP +K F ALKG+ N+ K +LF LLGPNGAGKTTTI
Sbjct: 517 AVQIRGLAKTYPGTTKFGCCKCKKTSPFHALKGLWMNIAKDQLFCLLGPNGAGKTTTINC 576
Query: 60 LTTLLEPTSGEARVLGFDIVKEA--REIRKRINLVAEGERTLYWRLTAYENLRYFASIYY 117
LT L T G+A + G I IRK I + + + L+ L+ E+L+ FASI
Sbjct: 577 LTGLFPVTGGDALIYGNSIRSSVGMSNIRKMIGVCPQFD-ILWDALSGEEHLKLFASIKG 635
Query: 118 VPKKVAEERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGL 177
+P + L V L + +YS GMK+RL++A +LI DP+++FLDEP +
Sbjct: 636 LPPSSINSMVEKSLAEVKLTEAGKIRAGSYSGGMKRRLSVAVSLIGDPKLVFLDEPVCNI 695
Query: 178 ---DVQ--------SAIFV-------------RELIKKLVEEEKK--TVLLTTHYMHEAE 211
DV S + V R + +++E KK ++LTTH M EA+
Sbjct: 696 YSVDVYLFKSLFLFSCVLVIHGLQTTGMDPITRRHVWDIIQETKKGRAIILTTHSMEEAD 755
Query: 212 ELCDRIAIIDHGRIIALDTPEGLKKLVRKDTIVE---VRVKNYNGE 254
L DRI I+ GR+ + T LK I V N+NGE
Sbjct: 756 ILSDRIGIMAKGRLRCIGTSIRLKSRFGTGFIANISFVESNNHNGE 801
>pir||T07716 probable ABC-type transport protein T23J7.100 - Arabidopsis
thaliana >gi|4741194|emb|CAB41860.1| (AL049746) ABC
transporter-like protein [Arabidopsis thaliana]
Length = 722
Score = 130 bits (324), Expect = 2e-29
Identities = 102/336 (30%), Positives = 168/336 (49%), Gaps = 36/336 (10%)
Query: 8 NLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKILTT----- 62
NL+K+Y + P + A+ G++ V GE FG+LGPNGAGKT+ I +++T
Sbjct: 396 NLKKVYQGRDGNPPKL-----AVCGLSLAVPSGECFGMLGPNGAGKTSFINMVSTQRDIY 450
Query: 63 ---------LLEPTSGEARVLGFDIVKEAREIRKRINLVAEGERTLYWR-LTAYENLRYF 112
L++P+SG A V G DI K+ ++ I++ + L W LT E+L ++
Sbjct: 451 TNLLCLMTGLVKPSSGSAFVQGLDICKDMDKVY--ISMGVCPQHDLLWETLTGKEHLLFY 508
Query: 113 ASIYYVPKKVAEERIRNLLHMVGLWDR--KDDLVMNYSRGMKQRLAIAKALINDPEVLFL 170
+ + + + L V L+ D YS GMK+RL++A +LI P+V+++
Sbjct: 509 GRLKNLKGHDLNQAVEESLKSVNLFHGGVADIPAGKYSGGMKRRLSVAISLIGSPKVVYM 568
Query: 171 DEPTLGLDVQSAIFVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRIIALDT 230
DEP+ GLD S I + +IK+ ++ ++LTTH M EAE LCDR+ I GR+ +
Sbjct: 569 DEPSTGLDPASRINLWTVIKR--AKKHAAIILTTHSMEEAEFLCDRLGIFVDGRLQCIGN 626
Query: 231 PEGLKKLVRKDTIVEVRVKNYNGENPFGLA-KIKEEGEKVV-------LRGPLDEEDIPK 282
P+ LK ++ + + ++ L ++ K+ P +E I +
Sbjct: 627 PKELKGRYGGSYVLTITTSPEHEKDVETLVQEVSSNARKIYHIAGTQKFEFPKEEVRISE 686
Query: 283 LVEFL--VKNNAKVLSVEVKEPTLEDVFIKLTGRGL 316
+ + + K N V + + TLEDVFIK+ GL
Sbjct: 687 VFQAVENAKRNFTVFAWGFADTTLEDVFIKVAKTGL 722
>gb|AAC62423.1| (AF084104) NatA [Bacillus firmus]
Length = 299
Score = 130 bits (323), Expect = 3e-29
Identities = 91/289 (31%), Positives = 153/289 (52%), Gaps = 14/289 (4%)
Query: 29 ALKGITFNVKKGELFGLLGPNGAGKTTTIKILTTLLEPTSGEARVLGFDIVKEAREIRKR 88
A+ ++ + GE+FG+LG NGAGKTTT +++ LLEPT GE G I +
Sbjct: 17 AVDQLSLEIPSGEMFGMLGANGAGKTTTFRMMLGLLEPTEGEMTWKGEKIDYSRTNV--- 73
Query: 89 INLVAEGERTLYWRLTAYENLRYFASIYYVPKKVAEERIRNLLHMVGLWDRKDDLVMNYS 148
I + E ER LY +L + L Y + + KK +R L + D + + S
Sbjct: 74 IGYLPE-ERGLYPKLKVRDQLIYLGRLKGMHKKDIIPEMRMWLERFKVTDYETKRIEELS 132
Query: 149 RGMKQRLAIAKALINDPEVLFLDEPTLGLDVQSAIFVRELIKKLVEEEKK---TVLLTTH 205
+G +Q++ ++I+ PE+L LDEP GLD +A EL+K+ V + KK T++ ++H
Sbjct: 133 KGNQQKIQFIASVIHRPELLILDEPFSGLDPVNA----ELLKEAVIDLKKKGTTIVFSSH 188
Query: 206 YMHEAEELCDRIAIIDHGRIIALDTPEGLKKLVRKDTIVEVRVKNYNG-ENPFGLAKIKE 264
M EELC + I+ HG + +K+ R IV +++ +N G+ K ++
Sbjct: 189 RMDHVEELCQHLCILRHGTPVVKGELREIKRSFRNKFIVIEGERSFETLKNLPGVKKFQQ 248
Query: 265 EGEKVVLRGPLDEEDIPKLVEFLVKNNAKVLSVEVKEPTLEDVFIKLTG 313
+ V L+ +++E++ K++ V + V EV+EP+L+D+FI+ G
Sbjct: 249 KQGGVRLQ--VEDEEVAKVIFAEVAKSGYVRRFEVEEPSLQDIFIEKVG 295
>pir||H64716 ABC transporter, ATP-binding protein - Helicobacter pylori (strain
26695) >gi|2314761|gb|AAD08616.1| (AE000655) ABC
transporter, ATP-binding protein (abc) [Helicobacter
pylori 26695]
Length = 327
Score = 129 bits (322), Expect = 3e-29
Identities = 88/313 (28%), Positives = 165/313 (52%), Gaps = 30/313 (9%)
Query: 4 IEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKILTTL 63
+E+KN+ K+Y F ALKG+ +KKG++ G++G +GAGK+T I+++ L
Sbjct: 3 VELKNIEKIYENG----------FHALKGVNLELKKGDILGVIGYSGAGKSTLIRLINCL 52
Query: 64 LEPTSGEARVLGFDIVK----EAREIRKRINLVAEGERTLYWRLTAYENLRYFASIYYVP 119
P+SGE V G +++K E ++ R++I ++ + L + +EN+ + I
Sbjct: 53 ERPSSGEVLVNGVNLLKLKPKELQKARQKIGMIFQHFNLLSAK-NVFENVAFALEIARWE 111
Query: 120 KKVAEERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDV 179
K + R+ LL +VGL D+ S G KQR+AIA++L N P++L DE T LD
Sbjct: 112 KNKIKSRVHELLELVGLEDKMHFYPKQLSGGQKQRVAIARSLANCPDLLLCDEATSALDS 171
Query: 180 QSAIFVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRIIALDTPEGL----K 235
++ + L+ + ++ +++ TH + +ELC+++ +I G I+ + E + K
Sbjct: 172 KTTHSILTLLSGIQKKLDLSIVFITHEIEVVKELCNQMCVISSGEIVERGSVEEIFANPK 231
Query: 236 KLVRKDTIVEVRVKNYNGENPFGLAKIKEEGEKVVLRGP-LDEEDIPKLVEFLVKNNAKV 294
V K+ + ++N + + K ++ ++V G LDE I L++ K + +
Sbjct: 232 HAVTKELL---GIRNEHAD------KKSQDVYRIVFLGEHLDEPIISNLIK-RFKIDVSI 281
Query: 295 LSVEVKEPTLEDV 307
+S ++E T +D+
Sbjct: 282 ISGNIEELTTKDI 294
>gb|AAF23811.1|AF213822_26 (AF213822) ABC binding protein [Zymomonas mobilis]
Length = 298
Score = 129 bits (322), Expect = 3e-29
Identities = 82/232 (35%), Positives = 124/232 (53%), Gaps = 13/232 (5%)
Query: 4 IEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKILTTL 63
+ + + K+YP K P+ AL ++ NV G +FGLLGPNGAGK+T + I+ TL
Sbjct: 2 LRLSGVSKIYPGKNPV--------HALNNVSLNVPSG-IFGLLGPNGAGKSTLMSIIATL 52
Query: 64 LEPTSGEARVLGFDIVKEAREIRKRINLVAEGERTLYWRLTAYENLRYFASIYYVPKKVA 123
P G + D RE+R ++ + + T Y +A E L YFA + +
Sbjct: 53 QRPDRGSIHLGEIDAFASPREMRAKLGYLPQDFGT-YPGASAEELLHYFARLKGISTAAE 111
Query: 124 EE-RIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQSA 182
E +I LL MV L K+ V +YS GM+QR +A+AL+ P++L + EPT GLD
Sbjct: 112 REHQIGTLLEMVNLDAAKNRPVSDYSGGMRQRFGVAQALLGHPKLLIVVEPTAGLDPAER 171
Query: 183 IFVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRIIALDTPEGL 234
+++ + E ++L+TH + + LC RIA+I+ GRI+A PE L
Sbjct: 172 NRFNQILANI--GENTAIILSTHIIEDVSNLCRRIAVINQGRIMAEGDPEKL 221
>pir||T35090 probable ABC transport ATP-binding subunit - Streptomyces
coelicolor >gi|5596806|emb|CAB51453.1| (AL096884)
putative ABC transport ATP-binding subunit [Streptomyces
coelicolor A3(2)]
Length = 324
Score = 129 bits (321), Expect = 4e-29
Identities = 92/295 (31%), Positives = 148/295 (49%), Gaps = 17/295 (5%)
Query: 29 ALKGITFNVKKGELFGLLGPNGAGKTTTIKILTTLLEPTSGEARVLGFDIVKEAREIRKR 88
A +T ++++GE+FGLLGPNGAGK+T ++ LT L+ P G +LG DIV+ +
Sbjct: 28 ATDDVTLDIRRGEIFGLLGPNGAGKSTLVRQLTGLMRPDGGSVEILGHDIVRHPERAARI 87
Query: 89 INLVAEGERTLYWRLT---AYENLRYFASIYYVPKKVAEERIRNLLHMVGLWDRKDDLVM 145
+ + + E + LT A E + + + + L + GL R +
Sbjct: 88 LAYLGQ-ESSALDELTVSLAAETTGRLRGLEVRRARAERDAVLEELGLTGLAGRP---IK 143
Query: 146 NYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQSAIFVRELIKKLVEEEKKTVLLTTH 205
S G ++ A AL+ + +L LDEPT G+D + V + + E TVLL TH
Sbjct: 144 KLSGGQRRLACFAAALVGERPLLVLDEPTTGMDPVARRAVWSAVDRRRAEHGATVLLVTH 203
Query: 206 YMHEAEELCDRIAIIDHGRIIALDTPEGLKKLVRKDTIVEVRVKNYNGENPFGLA----K 261
+ EAE + DR+A++D GR+IA DTP GLK+ V + V++ + N +A +
Sbjct: 204 NVIEAETVLDRVAVLDRGRVIACDTPAGLKEQVAGEVRVDLVWRESAPLNVPEVAALRDR 263
Query: 262 IKEEGEKVVLRGPLDEEDIPKLVEFLVKNNAKVLSVE---VKEPTLEDVFIKLTG 313
+ E G + LR +E + V V A +++ + P+LEDV++ L G
Sbjct: 264 VVESGRRWTLRLAPEE---ARAVVATVTGGAAFAALDDFTLATPSLEDVYLALGG 315
>pir||F71800 ABC transporter, ATP-binding protein - Helicobacter pylori (strain
J99) >gi|4156118|gb|AAD07069.1| (AE001570) abc
transporter, ATP-binding protein [Helicobacter pylori
J99]
Length = 327
Score = 128 bits (319), Expect = 8e-29
Identities = 89/312 (28%), Positives = 161/312 (51%), Gaps = 28/312 (8%)
Query: 4 IEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKILTTL 63
+E+KN+ K+Y F ALKG+ +KKG++ G++G +GAGK+T I+++ L
Sbjct: 3 VELKNIEKIYENG----------FHALKGVNLELKKGDILGVIGYSGAGKSTLIRLINCL 52
Query: 64 LEPTSGEARVLGFDIV----KEAREIRKRINLVAEGERTLYWRLTAYENLRYFASIYYVP 119
P+SGE V G +++ KE ++ R++I ++ + L + +EN+ + I
Sbjct: 53 ERPSSGEVLVNGVNLLNLKPKELQKARQKIGMIFQHFNLLSAK-NVFENVAFALEIARWE 111
Query: 120 KKVAEERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDV 179
K + R+ LL +VGL D+ S G KQR+AIA++L N P +L DE T LD
Sbjct: 112 KTKIKSRVHELLELVGLEDKVHFYPKQLSGGQKQRVAIARSLANCPNLLLCDEATSALDS 171
Query: 180 QSAIFVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRIIALDTPEGL----K 235
++ + L+ + ++ +++ TH + +ELC+++ +I G I+ + E + K
Sbjct: 172 KTTHSILTLLSGIQKKFDLSIVFITHQIEVVKELCNQMCVISSGEIVERGSVEEIFANPK 231
Query: 236 KLVRKDTIVEVRVKNYNGENPFGLAKIKEEGEKVVLRGPLDEEDIPKLVEFLVKNNAKVL 295
V K+ + +KN + + K ++ V L LDE I L+ K + ++
Sbjct: 232 HAVTKELL---GIKNEHADQ-----KSQDIYRIVFLGEHLDEPIISNLIR-RFKIDVSII 282
Query: 296 SVEVKEPTLEDV 307
S ++E T +D+
Sbjct: 283 SGNIEELTTKDI 294
>gi|7304849 ATP-binding cassette 1, sub-family A, member 1 [Mus musculus]
>gi|728773|sp|P41233|ABC1_MOUSE ATP-BINDING CASSETTE,
SUB-FAMILY A, MEMBER 1 (ATP-BINDING CASSETTE TRANSPORTER
1) (ATP-BINDING CASSETTE 1) (ABC-1)
>gi|1082238|pir||A54774 ATP binding cassette transporter
ABC1 - mouse >gi|495257|emb|CAA53530.1| (X75926) abc1
[Mus musculus]
Length = 2201
Score = 128 bits (318), Expect = 1e-28
Identities = 101/321 (31%), Positives = 160/321 (49%), Gaps = 29/321 (9%)
Query: 4 IEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKILTTL 63
+E+K L K+Y +K RK A+ I + GE FGLLG NGAGK+TT K+LT
Sbjct: 1852 LEIKELTKIYRRK-----RK----PAVDRICIGIPPGECFGLLGVNGAGKSTTFKMLTGD 1902
Query: 64 LEPTSGEARVLGFDIVKEAREIRKRINLVAEGERTLYWRLTAYENLRYFASIYYVPKKVA 123
T G+A + I+ E+ + + + + + LT E++ +FA + VP+K
Sbjct: 1903 TPVTRGDAFLNKNSILSNIHEVHQNMGYCPQFD-AITELLTGREHVEFFALLRGVPEKEV 1961
Query: 124 EERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQSAI 183
+ + +GL + NYS G K++L+ A ALI P V+FLDEPT G+D ++
Sbjct: 1962 GKFGEWAIRKLGLVKYGEKYASNYSGGNKRKLSTAMALIGGPPVVFLDEPTTGMDPKARR 2021
Query: 184 FVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRIIALDTPEGLKKLVRKDTI 243
F+ +V +E ++V+LT+H M E E LC R+AI+ +GR L + + LK
Sbjct: 2022 FLWNCALSIV-KEGRSVVLTSHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYT 2080
Query: 244 VEVRVKNYNGENP--------FGLA----KIKEEGEKVV-LRGPLDEEDIPKLVEFL--V 288
+ VR+ G NP FGLA +KE+ ++ + P + ++ L
Sbjct: 2081 IVVRIA---GSNPDLKPVQEFFGLAFPGSVLKEKHRNMLQYQLPSSLSSLARIFSILSQS 2137
Query: 289 KNNAKVLSVEVKEPTLEDVFI 309
K + V + TL+ VF+
Sbjct: 2138 KKRLHIEDYSVSQTTLDQVFV 2158
Score = 127 bits (315), Expect = 2e-28
Identities = 85/248 (34%), Positives = 134/248 (53%), Gaps = 22/248 (8%)
Query: 4 IEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKILTTL 63
+ ++NL K+Y + + A+ G+ N +G++ LG NGAGKTTT+ ILT L
Sbjct: 839 VSIQNLVKVYRDGMKV---------AVDGLALNFYEGQITSFLGHNGAGKTTTMSILTGL 889
Query: 64 LEPTSGEARVLGFDIVKEAREIRKRINLVAEGERTLYWRLTAYENLRYFASIYYVPKKVA 123
PTSG A +LG DI E IR+ + V L+ LT E++ ++A + + +K
Sbjct: 890 FPPTSGTAYILGKDIRSEMSSIRQNLG-VCPQHNVLFDMLTVEEHIWFYARLKGLSEKHV 948
Query: 124 EERIRNLLHMVGLWDRK-DDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQSA 182
+ + + VGL K S GM+++L++A A + +V+ LDEPT G+D S
Sbjct: 949 KAEMEQMALDVGLPPSKLKSKTSQLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYSR 1008
Query: 183 IFVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRIIALDTPEGLKK------ 236
+ EL+ K + +T++L+TH+M EA+ L DRIAII HG++ + + LK
Sbjct: 1009 RGIWELLLKY--RQGRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKNQLGTGY 1066
Query: 237 ---LVRKD 241
LV+KD
Sbjct: 1067 YLTLVKKD 1074
>gb|AAC45666.1| (AF010307) AbcC [Helicobacter pylori]
Length = 327
Score = 128 bits (318), Expect = 1e-28
Identities = 89/313 (28%), Positives = 166/313 (52%), Gaps = 30/313 (9%)
Query: 4 IEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKILTTL 63
+E+KN+ K+Y F ALKG+ +KKG++ G++G +GAGK+T I+++ L
Sbjct: 3 VELKNIEKIYENG----------FHALKGVNLELKKGDILGVIGYSGAGKSTLIRLINCL 52
Query: 64 LEPTSGEARVLGFDIVK----EAREIRKRINLVAEGERTLYWRLTAYENLRYFASIYYVP 119
P+SGE V G +++K E ++ R++I ++ + L + +EN+ + I
Sbjct: 53 ERPSSGEVLVNGVNLLKLKPKELQKARQKIGMIFQHFNLLSAK-DVFENVAFALEIARWE 111
Query: 120 KKVAEERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDV 179
K + R+ LL +VGL D+ S G K+R+AIA++L N P++L DE T LD
Sbjct: 112 KTKIKSRVHELLELVGLEDKVHFYPKQLSGGQKERVAIARSLANCPDLLLCDEATSALDS 171
Query: 180 QSAIFVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRIIALDTPEGL----K 235
++ + L+ + ++ +V+ TH + +ELC+++ +I G I+ + E + K
Sbjct: 172 KTTHSILTLLSGIQKKLDLSVVFITHQIEVVKELCNQMCVISSGEIVERGSVEEIFANPK 231
Query: 236 KLVRKDTIVEVRVKNYNGENPFGLAKIKEEGEKVVLRGP-LDEEDIPKLVEFLVKNNAKV 294
V K+ ++ +R ++ N K ++ ++V G LDE I L++ K + +
Sbjct: 232 HAVTKE-LLGIRNEHAN--------KKSQDVYRIVFLGEHLDEPIISNLIK-RFKIDMSI 281
Query: 295 LSVEVKEPTLEDV 307
+S ++E T +D+
Sbjct: 282 ISGNIEELTTKDI 294
>emb|CAB75312.1| (AL139164) putative ABC transporter ATP-binding protein
[Streptomyces coelicolor A3(2)]
Length = 866
Score = 127 bits (317), Expect = 1e-28
Identities = 98/291 (33%), Positives = 153/291 (51%), Gaps = 15/291 (5%)
Query: 29 ALKGITFNVKKGELFGLLGPNGAGKTTTIKILTTLLEPTSGEARVLGFDIVKEAREIRKR 88
A++ ++F V+KG++ GLLGPNGAGKTTT+++L L++P GE RV G ++ + R
Sbjct: 582 AVRELSFRVEKGQVLGLLGPNGAGKTTTLRMLMGLIKPDDGEIRVFG-HAIRPGAPVLSR 640
Query: 89 INLVAEGERTLYWRLTAYENLRYFASIYYVPKKVAEERIRNLLHMVGLWDRKDDLVMNYS 148
+ EG L L+ ENL + P + A + L + GL D V YS
Sbjct: 641 VGAFVEGAGFLP-HLSGRENLELYWRATGRPPENA--HLDEALEIAGLGDALARAVRTYS 697
Query: 149 RGMKQRLAIAKALINDPEVLFLDEPTLGLDVQSAIFVRELIKKLVEEEKKTVLLTTHYMH 208
+GM+QRLAIA+A++ P++L LDEPT GLD +RE++ + +TV++++H +
Sbjct: 698 QGMRQRLAIAQAMLGLPDLLILDEPTNGLDPPQIREMREVMIRYA-AAGRTVIVSSHLLA 756
Query: 209 EAEELCDRIAIIDHGRI-----IALDTPEGLKKLVRKDTIVEVRVKNYNGENPFGLAKIK 263
E E+ C + ++D GR+ +A G LV V+ + + P G+A +
Sbjct: 757 EVEQSCTHLVVMDRGRLVQAGPVAEIIGSGDTLLVGTGLPVDEPLVDKVAALP-GVASVV 815
Query: 264 EEGEKVVLRGPLDE-EDIPKLVEFLVKNNAKVLSVEVKEPTLEDVFIKLTG 313
+ +++R LD P LV LV+ V SV LED F+ L G
Sbjct: 816 HTDDGLLVR--LDPGGTAPGLVAELVRLEIPVASVG-PHRRLEDAFLTLIG 863
>pir||A70039 ABC transporter (ATP-binding protein) homolog yvfR - Bacillus
subtilis >gi|1945718|emb|CAB08012.1| (Z94043)
hypothetical protein [Bacillus subtilis]
>gi|2635922|emb|CAB15414.1| (Z99121) similar to ABC
transporter (ATP-binding protein) [Bacillus subtilis]
Length = 301
Score = 127 bits (316), Expect = 2e-28
Identities = 88/315 (27%), Positives = 166/315 (51%), Gaps = 30/315 (9%)
Query: 2 KAIEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKILT 61
+A+ V N+ K + +K A+ I+F+++KGE+ +LGPNGAGKTT + ++
Sbjct: 4 EAVTVSNVTKHFQRKT-----------AVNNISFSIEKGEIAAILGPNGAGKTTVVSMIL 52
Query: 62 TLLEPTSGEARVLGFDIVKEAREIRKRINLVAEGERTLYWRLTAYENLRYFASIYYVPKK 121
LL+P+ GE ++ F+ V + +++R++I ++ + E ++ L E L F S Y P
Sbjct: 53 GLLKPSEGEIKL--FNRVPDDQQVREKIGVMLQ-EVSVMPGLKVDEILELFRSYYPNPLS 109
Query: 122 VAEERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQS 181
+ E L L R + L S G K+RL+ A AL +PE+L LDEPT+G+D S
Sbjct: 110 MKELVSLTALTKEDLKTRAEKL----SGGQKRRLSFALALAGNPELLILDEPTVGMDTSS 165
Query: 182 AIFVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRIIALDTPEGLKKLVRKD 241
+ I L ++ KT++ +THY+ EA++ RI G+++A +P ++ ++K
Sbjct: 166 RHRFWQTIHGL-SDQGKTIIFSTHYLQEADDAAQRILFFTEGQLVADGSPMQIRSRIQKQ 224
Query: 242 TIVEVRVKNYNGENPFGLAKIK--EEGEKVV---LRGPLDEEDIPKLVEFLVKNNAKVLS 296
++ ++ + L ++ E E+V+ R + + K++ + + N
Sbjct: 225 SV------SFTLHSSESLERLSCHPEVERVIHEHERTIIQTSNTDKVLALIFQENIHARD 278
Query: 297 VEVKEPTLEDVFIKL 311
+ +++ TL++ F +L
Sbjct: 279 IRIEQATLDEAFRQL 293
>gb|AAB91597.1| (U09819) SpaF [Bacillus subtilis]
Length = 247
Score = 127 bits (316), Expect = 2e-28
Identities = 84/222 (37%), Positives = 127/222 (56%), Gaps = 20/222 (9%)
Query: 4 IEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKILTTL 63
+E K+L K + K+ A+ ++ V+K ++GLLGPNGAGK+TT+KILT +
Sbjct: 15 LETKSLTKKFGKET-----------AVADVSLTVQKNSIYGLLGPNGAGKSTTLKILTGI 63
Query: 64 LEPTSGEARVLGFDIVKEAREIRKRINLVAEGERTLYWRLTAYENLRYFASIYYVPKKVA 123
L TSGE + FD K R + I + E LY LTA+EN++ A++ ++
Sbjct: 64 LRKTSGE---ILFDGHKWKRSDLQTIGSLIEAP-PLYDNLTAFENVKVHATLL----GLS 115
Query: 124 EERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQSAI 183
E+RI ++L V + +S GM+QRL IA AL+N P++L LDEPT GLD
Sbjct: 116 EDRIHSVLKTVDMQHAGKKRAGQFSMGMRQRLGIAIALLNHPKLLILDEPTNGLDPIGIQ 175
Query: 184 FVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRI 225
+R+LI+ +E TV+L++H + E E++ D I II G +
Sbjct: 176 ELRDLIRSF-PQEGITVILSSHILSEVEQIADHIGIIIDGHL 216
>gi|5915658 ATP-binding cassette, sub-family A member 1; ATP-binding cassette 1;
high density lipoprotein deficiency, Tangier type, 1;
cholesterol efflux regulatory protein [Homo sapiens]
>gi|8927983|sp|O95477|ABC1_HUMAN ATP-BINDING CASSETTE,
SUB-FAMILY A, MEMBER 1 (ATP-BINDING CASSETTE TRANSPORTER
1) (ATP-BINDING CASSETTE 1) (ABC-1) (CHOLESTEROL EFFLUX
REGULATORY PROTEIN) >gi|4128033|emb|CAA10005.1|
(AJ012376) ATP-binding cassette transporter-1 (ABC-1)
[Homo sapiens] >gi|5734101|gb|AAD49849.1|AF165281_1
(AF165281) ATP cassette binding transporter 1 [Homo
sapiens]
Length = 2201
Score = 127 bits (316), Expect = 2e-28
Identities = 85/248 (34%), Positives = 134/248 (53%), Gaps = 22/248 (8%)
Query: 4 IEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKILTTL 63
+ ++NL K+Y + + A+ G+ N +G++ LG NGAGKTTT+ ILT L
Sbjct: 839 VSIQNLVKVYRDGMKV---------AVDGLALNFYEGQITSFLGHNGAGKTTTMSILTGL 889
Query: 64 LEPTSGEARVLGFDIVKEAREIRKRINLVAEGERTLYWRLTAYENLRYFASIYYVPKKVA 123
PTSG A +LG DI E IR+ + V L+ LT E++ ++A + + +K
Sbjct: 890 FPPTSGTAYILGKDIRSEMSTIRQNLG-VCPQHNVLFDMLTVEEHIWFYARLKGLSEKHV 948
Query: 124 EERIRNLLHMVGLWDRK-DDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQSA 182
+ + + VGL K S GM+++L++A A + +V+ LDEPT G+D S
Sbjct: 949 KAEMEQMALDVGLPSSKLKSKTSQLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYSR 1008
Query: 183 IFVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRIIALDTPEGLKK------ 236
+ EL+ K + +T++L+TH+M EA+ L DRIAII HG++ + + LK
Sbjct: 1009 RGIWELLLKY--RQGRTIILSTHHMDEADVLGDRIAIISHGKLCCVGSSLFLKNQLGTGY 1066
Query: 237 ---LVRKD 241
LV+KD
Sbjct: 1067 YLTLVKKD 1074
Score = 125 bits (312), Expect = 5e-28
Identities = 105/325 (32%), Positives = 162/325 (49%), Gaps = 37/325 (11%)
Query: 4 IEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKILTTL 63
+E+K L K+Y +K RK A+ I + GE FGLLG NGAGK++T K+LT
Sbjct: 1852 LEIKELTKIYRRK-----RK----PAVDRICVGIPPGECFGLLGVNGAGKSSTFKMLTGD 1902
Query: 64 LEPTSGEARVLGFDIVKEAREIRKRINLVAEGERTLYWRLTAYENLRYFASIYYVPKK-- 121
T G+A + I+ E+ + + + + + LT E++ +FA + VP+K
Sbjct: 1903 TTVTRGDAFLNRNSILSNIHEVHQNMGYCPQFD-AITELLTGREHVEFFALLRGVPEKEV 1961
Query: 122 --VAEERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDV 179
V E IR L GL + NYS G K++L+ A ALI P V+FLDEPT G+D
Sbjct: 1962 GKVGEWAIRKL----GLVKYGEKYAGNYSGGNKRKLSTAMALIGGPPVVFLDEPTTGMDP 2017
Query: 180 QSAIFVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRIIALDTPEGLKKLVR 239
++ F+ +V +E ++V+LT+H M E E LC R+AI+ +GR L + + LK
Sbjct: 2018 KARRFLWNCALSVV-KEGRSVVLTSHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFG 2076
Query: 240 KDTIVEVRVKNYNGENP--------FGLA---KIKEEGEKVVLRG--PLDEEDIPKLVEF 286
+ VR+ G NP FGLA + +E + +L+ P + ++
Sbjct: 2077 DGYTIVVRIA---GSNPDLKPVQDFFGLAFPGSVPKEKHRNMLQYQLPSSLSSLARIFSI 2133
Query: 287 L--VKNNAKVLSVEVKEPTLEDVFI 309
L K + V + TL+ VF+
Sbjct: 2134 LSQSKKRLHIEDYSVSQTTLDQVFV 2158
>gb|AAF86276.1|AF275948_1 (AF275948) ABCA1 [Homo sapiens]
Length = 2261
Score = 127 bits (316), Expect = 2e-28
Identities = 85/248 (34%), Positives = 134/248 (53%), Gaps = 22/248 (8%)
Query: 4 IEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKILTTL 63
+ ++NL K+Y + + A+ G+ N +G++ LG NGAGKTTT+ ILT L
Sbjct: 899 VSIQNLVKVYRDGMKV---------AVDGLALNFYEGQITSFLGHNGAGKTTTMSILTGL 949
Query: 64 LEPTSGEARVLGFDIVKEAREIRKRINLVAEGERTLYWRLTAYENLRYFASIYYVPKKVA 123
PTSG A +LG DI E IR+ + V L+ LT E++ ++A + + +K
Sbjct: 950 FPPTSGTAYILGKDIRSEMSTIRQNLG-VCPQHNVLFDMLTVEEHIWFYARLKGLSEKHV 1008
Query: 124 EERIRNLLHMVGLWDRK-DDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQSA 182
+ + + VGL K S GM+++L++A A + +V+ LDEPT G+D S
Sbjct: 1009 KAEMEQMALDVGLPSSKLKSKTSQLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYSR 1068
Query: 183 IFVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRIIALDTPEGLKK------ 236
+ EL+ K + +T++L+TH+M EA+ L DRIAII HG++ + + LK
Sbjct: 1069 RGIWELLLKY--RQGRTIILSTHHMDEADVLGDRIAIISHGKLCCVGSSLFLKNQLGTGY 1126
Query: 237 ---LVRKD 241
LV+KD
Sbjct: 1127 YLTLVKKD 1134
Score = 126 bits (313), Expect = 4e-28
Identities = 105/325 (32%), Positives = 162/325 (49%), Gaps = 37/325 (11%)
Query: 4 IEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKILTTL 63
+E+K L K+Y +K RK A+ I + GE FGLLG NGAGK++T K+LT
Sbjct: 1912 LEIKELTKIYRRK-----RK----PAVDRICVGIPPGECFGLLGVNGAGKSSTFKMLTGD 1962
Query: 64 LEPTSGEARVLGFDIVKEAREIRKRINLVAEGERTLYWRLTAYENLRYFASIYYVPKK-- 121
T G+A + I+ E+ + + + + + LT E++ +FA + VP+K
Sbjct: 1963 TTVTRGDAFLNXNSILSNIHEVHQNMGYCPQFD-AITELLTGREHVEFFALLRGVPEKEV 2021
Query: 122 --VAEERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDV 179
V E IR L GL + NYS G K++L+ A ALI P V+FLDEPT G+D
Sbjct: 2022 GKVGEWAIRKL----GLVKYGEKYAGNYSGGNKRKLSTAMALIGGPPVVFLDEPTTGMDP 2077
Query: 180 QSAIFVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRIIALDTPEGLKKLVR 239
++ F+ +V +E ++V+LT+H M E E LC R+AI+ +GR L + + LK
Sbjct: 2078 KARRFLWNCALSVV-KEGRSVVLTSHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFG 2136
Query: 240 KDTIVEVRVKNYNGENP--------FGLA---KIKEEGEKVVLRG--PLDEEDIPKLVEF 286
+ VR+ G NP FGLA + +E + +L+ P + ++
Sbjct: 2137 DGYTIVVRIA---GSNPDLKPVQDFFGLAFPGSVXKEKHRNMLQYQLPSSLSSLARIFSI 2193
Query: 287 L--VKNNAKVLSVEVKEPTLEDVFI 309
L K + V + TL+ VF+
Sbjct: 2194 LSQSKKRLHIEDYSVSQTTLDQVFV 2218
>gb|AAF98175.1|AF285167_1 (AF285167) ATP-binding cassette transporter 1 [Homo sapiens]
Length = 2261
Score = 127 bits (316), Expect = 2e-28
Identities = 85/248 (34%), Positives = 134/248 (53%), Gaps = 22/248 (8%)
Query: 4 IEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKILTTL 63
+ ++NL K+Y + + A+ G+ N +G++ LG NGAGKTTT+ ILT L
Sbjct: 899 VSIQNLVKVYRDGMKV---------AVDGLALNFYEGQITSFLGHNGAGKTTTMSILTGL 949
Query: 64 LEPTSGEARVLGFDIVKEAREIRKRINLVAEGERTLYWRLTAYENLRYFASIYYVPKKVA 123
PTSG A +LG DI E IR+ + V L+ LT E++ ++A + + +K
Sbjct: 950 FPPTSGTAYILGKDIRSEMSTIRQNLG-VCPQHNVLFDMLTVEEHIWFYARLKGLSEKHV 1008
Query: 124 EERIRNLLHMVGLWDRK-DDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQSA 182
+ + + VGL K S GM+++L++A A + +V+ LDEPT G+D S
Sbjct: 1009 KAEMEQMALDVGLPSSKLKSKTSQLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYSR 1068
Query: 183 IFVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRIIALDTPEGLKK------ 236
+ EL+ K + +T++L+TH+M EA+ L DRIAII HG++ + + LK
Sbjct: 1069 RGIWELLLKY--RQGRTIILSTHHMDEADVLGDRIAIISHGKLCCVGSSLFLKNQLGTGY 1126
Query: 237 ---LVRKD 241
LV+KD
Sbjct: 1127 YLTLVKKD 1134
Score = 125 bits (311), Expect = 7e-28
Identities = 105/325 (32%), Positives = 162/325 (49%), Gaps = 37/325 (11%)
Query: 4 IEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKILTTL 63
+E+K L K+Y +K RK A+ I + GE FGLLG NGAGK++T K+LT
Sbjct: 1912 LEIKELTKIYRRK-----RK----PAVDRICVGIPPGECFGLLGVNGAGKSSTFKMLTGD 1962
Query: 64 LEPTSGEARVLGFDIVKEAREIRKRINLVAEGERTLYWRLTAYENLRYFASIYYVPKK-- 121
T G+A + I+ E+ + + + + + LT E++ +FA + VP+K
Sbjct: 1963 TTVTRGDAFLNKNSILSNIHEVHQNMGYCPQFD-AITELLTGREHVEFFALLRGVPEKEV 2021
Query: 122 --VAEERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDV 179
V E IR L GL + NYS G K++L+ A ALI P V+FLDEPT G+D
Sbjct: 2022 GKVGEWAIRKL----GLVKYGEKYAGNYSGGNKRKLSTAMALIGGPPVVFLDEPTTGMDP 2077
Query: 180 QSAIFVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRIIALDTPEGLKKLVR 239
++ F+ +V +E ++V+LT+H M E E LC R+AI+ +GR L + + LK
Sbjct: 2078 KARRFLWNCALSVV-KEGRSVVLTSHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFG 2136
Query: 240 KDTIVEVRVKNYNGENP--------FGLA----KIKEEGEKVV-LRGPLDEEDIPKLVEF 286
+ VR+ G NP FGLA +KE+ ++ + P + ++
Sbjct: 2137 DGYTIVVRIA---GSNPDLKPVQDFFGLAFPGSVLKEKHRNMLQYQLPSSLSSLARIFSI 2193
Query: 287 L--VKNNAKVLSVEVKEPTLEDVFI 309
L K + V + TL+ VF+
Sbjct: 2194 LSQSKKRLHIEDYSVSQTTLDQVFV 2218
>gi|11429275 ATP-binding cassette, sub-family A member 1 [Homo sapiens]
Length = 2231
Score = 127 bits (316), Expect = 2e-28
Identities = 85/248 (34%), Positives = 134/248 (53%), Gaps = 22/248 (8%)
Query: 4 IEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKILTTL 63
+ ++NL K+Y + + A+ G+ N +G++ LG NGAGKTTT+ ILT L
Sbjct: 869 VSIQNLVKVYRDGMKV---------AVDGLALNFYEGQITSFLGHNGAGKTTTMSILTGL 919
Query: 64 LEPTSGEARVLGFDIVKEAREIRKRINLVAEGERTLYWRLTAYENLRYFASIYYVPKKVA 123
PTSG A +LG DI E IR+ + V L+ LT E++ ++A + + +K
Sbjct: 920 FPPTSGTAYILGKDIRSEMSTIRQNLG-VCPQHNVLFDMLTVEEHIWFYARLKGLSEKHV 978
Query: 124 EERIRNLLHMVGLWDRK-DDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQSA 182
+ + + VGL K S GM+++L++A A + +V+ LDEPT G+D S
Sbjct: 979 KAEMEQMALDVGLPSSKLKSKTSQLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYSR 1038
Query: 183 IFVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRIIALDTPEGLKK------ 236
+ EL+ K + +T++L+TH+M EA+ L DRIAII HG++ + + LK
Sbjct: 1039 RGIWELLLKY--RQGRTIILSTHHMDEADVLGDRIAIISHGKLCCVGSSLFLKNQLGTGY 1096
Query: 237 ---LVRKD 241
LV+KD
Sbjct: 1097 YLTLVKKD 1104
Score = 125 bits (310), Expect = 9e-28
Identities = 105/325 (32%), Positives = 162/325 (49%), Gaps = 37/325 (11%)
Query: 4 IEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKILTTL 63
+E+K L K+Y +K RK A+ I + GE FGLLG NGAGK++T K+LT
Sbjct: 1882 LEIKELTKIYRRK-----RK----PAVDRICVGIPPGECFGLLGVNGAGKSSTFKMLTGD 1932
Query: 64 LEPTSGEARVLGFDIVKEAREIRKRINLVAEGERTLYWRLTAYENLRYFASIYYVPKK-- 121
T G+A + I+ E+ + + + + + LT E++ +FA + VP+K
Sbjct: 1933 TTVTRGDAFLNICSILSNIHEVHQNMGYCPQFD-AITELLTGREHVEFFALLRGVPEKEV 1991
Query: 122 --VAEERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDV 179
V E IR L GL + NYS G K++L+ A ALI P V+FLDEPT G+D
Sbjct: 1992 GKVGEWAIRKL----GLVKYGEKYAGNYSGGNKRKLSTAMALIGGPPVVFLDEPTTGMDP 2047
Query: 180 QSAIFVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRIIALDTPEGLKKLVR 239
++ F+ +V +E ++V+LT+H M E E LC R+AI+ +GR L + + LK
Sbjct: 2048 KARRFLWNCALSVV-KEGRSVVLTSHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFG 2106
Query: 240 KDTIVEVRVKNYNGENP--------FGLA----KIKEEGEKVV-LRGPLDEEDIPKLVEF 286
+ VR+ G NP FGLA +KE+ ++ + P + ++
Sbjct: 2107 DGYTIVVRIA---GSNPDLKPVQDFFGLAFPGSVLKEKHRNMLQYQLPSSLSSLARIFSI 2163
Query: 287 L--VKNNAKVLSVEVKEPTLEDVFI 309
L K + V + TL+ VF+
Sbjct: 2164 LSQSKKRLHIEDYSVSQTTLDQVFV 2188
>emb|CAC11214.1| (AL445063) gliding motility protein (gldA) related protein
[Thermoplasma acidophilum]
Length = 260
Score = 127 bits (315), Expect = 2e-28
Identities = 72/233 (30%), Positives = 133/233 (56%), Gaps = 13/233 (5%)
Query: 3 AIEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKILTT 62
+I++ N+ Y +K+ AL G+T ++ +G ++G+LGPNG+GKTT ++I+
Sbjct: 5 SIKIDNVSMRYGEKL-----------ALDGVTLDIPEGTIYGILGPNGSGKTTLMRIILG 53
Query: 63 LLEPTSGEARVLGFDIVKEAREIRKRINLVAEGERTLYWRLTAYENLRYFASIYYVPKKV 122
LL+ T+G A V G+D ++ +I++ V E LY +T E + ASI + +
Sbjct: 54 LLKQTAGSAIVCGYDSTRDQMKIKEISGYVPE-TPILYESMTPSELFSFIASIRRMDEGT 112
Query: 123 AEERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQSA 182
R+ L+ G+ + ++ + + S G +Q++AI A+++DP++L +DE GLD +SA
Sbjct: 113 FRRRVDALIDAFGIAEYINEFIGSLSFGNRQKVAIISAILHDPKILIVDEGINGLDPRSA 172
Query: 183 IFVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRIIALDTPEGLK 235
+ ++ + + K ++ +TH + AE LCD +AI+ +G I+A T L+
Sbjct: 173 KLFKSILTDM-RDHGKIIVFSTHILEIAESLCDHVAILYNGHIVANGTIADLR 224
>gb|AAG35594.1|AF200948_1 (AF200948) ABC1 transporter [Leishmania tropica]
Length = 1843
Score = 126 bits (314), Expect = 3e-28
Identities = 96/321 (29%), Positives = 155/321 (47%), Gaps = 25/321 (7%)
Query: 4 IEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKILTTL 63
+ V NLRK YP K+ A++ I V+ GE+FG LG NGAGKTTTI IL
Sbjct: 1505 VRVLNLRKEYPNG------KV----AVRNIALGVRPGEVFGFLGTNGAGKTTTISILCQE 1554
Query: 64 LEPTSGEARVLGFDIVKEAREIRKRINLVAEGERTLYWRLTAYENLRYFASIYYVPKKVA 123
PTSG A V G DIV E+ E + I + + L LT E+L +A + + +
Sbjct: 1555 FYPTSGRAYVCGNDIVTESSEALRCIGYCPQFDACLD-LLTVEEHLYLYAGVRGISSRAC 1613
Query: 124 EERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQSAI 183
+ +R L+ + GL + + S G +++L++A +LI P V+F DEP+ G+D +
Sbjct: 1614 DRVVRGLMKLCGLTEYRRTKSHELSGGNRRKLSVAVSLIGGPRVVFFDEPSAGMDPVARR 1673
Query: 184 FVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRIIALDTPEGLKKLVRKDTI 243
+ I+ + + +V+LTTH++ E E L R+AI+ G + + LK+
Sbjct: 1674 GLWNAIETVA--DNCSVVLTTHHLEEVEALAHRVAIMVDGTLRCIGDKTHLKQKYGTGFE 1731
Query: 244 VEVRVKNYNGENPFGLAKIKEE----GEKVVLRGPLDEEDIPKLVEF--------LVKNN 291
V VRV + + E G+ EE + +R +P V K
Sbjct: 1732 VAVRVADESPEVMAGVELFFEEEFPSSKLTEVRAGRFTYQLPSTVRLSSVFTALEQQKEK 1791
Query: 292 AKVLSVEVKEPTLEDVFIKLT 312
++ V + ++E VF++++
Sbjct: 1792 LQICDYSVSQTSIEQVFMRIS 1812
Score = 126 bits (313), Expect = 4e-28
Identities = 93/321 (28%), Positives = 161/321 (49%), Gaps = 22/321 (6%)
Query: 3 AIEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKILTT 62
A+ ++ LRK + R + F A+ + +++ +GE+ LLG NGAGK+TT+ ++T
Sbjct: 717 AVRIRGLRKTFR-------RGGKAFAAVDDLCWSLNEGEISVLLGHNGAGKSTTMNLMTG 769
Query: 63 LLEPTSGEARVLGFDIVKEAREIRKRINLVAEGERTLYWRLTAYENLRYFASIYYVPKKV 122
+LE G+ V G + E +R+ I L + L+ +LT E+L Y+A+I +
Sbjct: 770 MLEADGGDCYVYGHSVRHELSAVRQEIGLCPQ-HNILWPQLTVREHLDYYAAIKGLRGSE 828
Query: 123 AEERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQSA 182
E+ IR LL V L D++ + S G K++L++A A + ++ LDEPT G+DV +
Sbjct: 829 KEDAIRRLLAAVDLEDKEHYMSKALSGGQKRKLSVAVAFVGGSRLVILDEPTAGMDVGAR 888
Query: 183 IFVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRIIALDTPEGLKKLVRKDT 242
L+K++ + T+LLTTH+M EA+ L D +AI+ GR+ + LK +
Sbjct: 889 RHTWSLLKEMAKWH--TILLTTHFMDEADLLGDTVAIMSKGRLQCAGSNMFLKSKLGVGF 946
Query: 243 IVEVRVKNYNGENPF---------GLAKIKEEGEKVVLRGPLDEEDIPKLVEFLVKNNAK 293
++ + V ++ P I +V R P+ + + + V+
Sbjct: 947 VLTMSVVSHARRGPIEQMVQTLVPAAEAIGSGAGEVAYRLPMASKPMFPDLLCAVEEGIP 1006
Query: 294 VLSV---EVKEPTLEDVFIKL 311
L + + TLE+VFIK+
Sbjct: 1007 GLGINAYSLSATTLEEVFIKI 1027
>gb|AAC44025.1| (U47133) NosF protein [Sinorhizobium meliloti]
>gi|1588788|prf||2209347D nosF gene [Rhizobium meliloti]
Length = 304
Score = 126 bits (313), Expect = 4e-28
Identities = 97/295 (32%), Positives = 149/295 (49%), Gaps = 20/295 (6%)
Query: 30 LKGITFNVKKGELFGLLGPNGAGKTTTIKILTTLLEPTSGEARVLGFDIVKEAREIRKRI 89
++ I+F + E L+G NGAGKTT IK++ L+ PT G RVLG + +R+R+
Sbjct: 20 VRDISFGLGAAETVALVGHNGAGKTTLIKLMLGLIRPTKGLVRVLGENPATGDFAVRQRL 79
Query: 90 NLVAEGERTLYWRLTAYENLRYFASIYYVPKKVAEERIRNLLHMVGL-WDRKDDLVMNYS 148
+ E + LT E LR++A + K+V +L VGL + D V YS
Sbjct: 80 GYLPESV-SFNMALTGRETLRFYARL----KQVDGAATGDLFERVGLAQEAVDRPVRTYS 134
Query: 149 RGMKQRLAIAKALINDPEVLFLDEPTLGLDVQSAIFVRELIKKLVEEEKKTVLLTTHYMH 208
+GM+QRL +A+AL+ P +L LDEPT GLD ELI +L + TVLL++H +
Sbjct: 135 KGMRQRLGLAQALLGMPRILLLDEPTSGLDPALRRNFYELITEL-RAKGTTVLLSSHALT 193
Query: 209 EAEELCDRIAIIDHGRIIALDTPEGLKKLVRKDTIVEVRVKNYNGENPFGLAKIKEEGEK 268
E E DR+ I++ G IA T E L+++ R T + +++ + G P L G
Sbjct: 194 ELEGRADRVIIVNKGVKIADGTLEQLRRIARLPTRISLKL-SQAGATPAWL-----NGGM 247
Query: 269 VVLRGPLDEEDIP-------KLVEFLVKNNAKVLSVEVKEPTLEDVFIKLTGRGL 316
RGP D L+ + + A + + + EPTL+D++ G+
Sbjct: 248 KWCRGPDGAVDAEVSSDRKIALLHDITSDAALLSGLTITEPTLDDLYAHFLNGGV 302
>pir||T15200 hypothetical protein F12B6.1 - Caenorhabditis elegans
>gi|2088709|gb|AAB54153.1| (AF003138) strong similarity
to the ATP-binding transporter family (ABC transporters)
[Caenorhabditis elegans]
Length = 1447
Score = 126 bits (313), Expect = 4e-28
Identities = 89/264 (33%), Positives = 142/264 (53%), Gaps = 14/264 (5%)
Query: 3 AIEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKILTT 62
A+ V+NL K Y ++ A+KGI+F V+ GE FGLLG NGAGKTTT +LT
Sbjct: 1159 ALIVRNLAKAYNPELL----------AVKGISFAVEPGECFGLLGLNGAGKTTTFAMLTA 1208
Query: 63 LLEPTSGEARVLGFDI-VKEAREIRKRINL-VAEGERTLYWRLTAYENLRYFASIYYVPK 120
+ P G + I ++R L L +L+ ENL+++A I +
Sbjct: 1209 KIRPGHGSIEMQNTRINTGSFSDVRNFQQLGYCPQFDALNMKLSTRENLKFYARIRGIVP 1268
Query: 121 KVAEERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQ 180
+ I LL + L + + S G +++L++A AL++ P ++FLDEP+ G+D
Sbjct: 1269 TQIDSIIDRLLIALHLRPYANTQTSSLSGGNRRKLSVAVALVSQPSLIFLDEPSAGMDPG 1328
Query: 181 SAIFVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRIIALDTPEGLKKLVRK 240
S F+ ++I++L + K V+LT+H M E E LC RIAI+D GRI L + LK K
Sbjct: 1329 SQQFLWKVIERLC-KSGKAVVLTSHSMEECEALCTRIAIMDRGRIRCLGGKQHLKSKYGK 1387
Query: 241 DTIVEVRV-KNYNGENPFGLAKIK 263
+++ +++ K+ N + G+ + K
Sbjct: 1388 GSMLTMKMGKDENAKEIAGIMRSK 1411
Score = 125 bits (311), Expect = 7e-28
Identities = 73/192 (38%), Positives = 112/192 (58%), Gaps = 3/192 (1%)
Query: 29 ALKGITFNVKKGELFGLLGPNGAGKTTTIKILTTLLEPTSGEARVLGFDIVKEAREIRKR 88
AL + + +G++ GLLG NGAGKTTT+ IL L P+SG A++ DI + R +R
Sbjct: 345 ALDCLNLRLYEGQITGLLGHNGAGKTTTMSILCGLYAPSSGTAKIYQRDIRTDLRRVRDV 404
Query: 89 INLVAEGERTLYWRLTAYENLRYFASIYYVPKKVAEERIRNLLHMVGLWDRKDDLVMNYS 148
+ + + L+ LT E LR FA++ VP ++ +L V L ++ + L S
Sbjct: 405 LGICPQ-HNVLFSHLTVSEQLRLFAALKGVPDSELTSQVDEILASVSLTEKANKLASTLS 463
Query: 149 RGMKQRLAIAKALINDPEVLFLDEPTLGLDVQSAIFVRELIKKLVEEEKKTVLLTTHYMH 208
GMK+RL I A I + LDEPT G+DV + + +L+++ +E +T+LL+TH+M
Sbjct: 464 GGMKRRLCIGIAFIGGSRFVILDEPTAGVDVTARKDIWKLLQR--NKEGRTILLSTHHMD 521
Query: 209 EAEELCDRIAII 220
EA+ L DRIAI+
Sbjct: 522 EADVLSDRIAIL 533
>pir||T33783 hypothetical protein Y39D8C.1 - Caenorhabditis elegans
>gi|3806158|gb|AAC69223.1| (AF101313) similar to the
ATP-binding transport protein family (ABC transporter)
(Pfam: ABC_tran.hmm, score: 162.68 and 139.46)
[Caenorhabditis elegans]
Length = 1802
Score = 124 bits (309), Expect = 1e-27
Identities = 88/303 (29%), Positives = 154/303 (50%), Gaps = 16/303 (5%)
Query: 24 IEW---FEALKGITFNVKKGELFGLLGPNGAGKTTTIKILTTLLEPTSGEARVLGFDIVK 80
++W F A+KG+ F+V + FGLLG NGAGKT+T ++LT +SG+A V G+ +
Sbjct: 1456 VKWYGNFNAVKGVNFHVNSKDCFGLLGVNGAGKTSTFQMLTGENSISSGDAYVNGWSVKN 1515
Query: 81 EAREIRKRINLVAEGERTLYWRLTAYENLRYFASIYYVPKKVAEERIRNLLHMVGLWDRK 140
RE + + + ++ E L FA I +P+K +++ ++H +G+
Sbjct: 1516 NWREAGANTGYCPQYDAIIK-EMSGEETLYMFARIRGIPEKDIPKKVNAVIHAIGIGMYA 1574
Query: 141 DDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQSAIFVRELIKKLVEEEKKTV 200
+ YS G K+RL++ A++ P+VL LDEPT G+D ++ + ++ +L + +
Sbjct: 1575 SRQIKTYSGGNKRRLSLGIAIVGLPDVLLLDEPTSGVDPKARRIIWNILNRL-RDLGTAL 1633
Query: 201 LLTTHYMHEAEELCDRIAIIDHGRIIALDTPEGLKKLVRKDTIVEVRVKNYNG------- 253
+LT+H M E E LC +AI+ +G+ + + +K + +R+KN N
Sbjct: 1634 VLTSHSMDECEALCTELAIMVYGKFRCYGSCQHIKSRYGSGYTLLIRLKNRNDAEKTKST 1693
Query: 254 -ENPFGLAKIKEEGE-KVVLRGPLDEEDIPKLVEFL--VKNNAKVLSVEVKEPTLEDVFI 309
+ F + IKEE ++ P D + +L E L V + + + TLE VFI
Sbjct: 1694 IKQTFRGSVIKEEHVLQLNFDIPRDGDSWSRLFEKLETVSTSLNWDDYSLSQTTLEQVFI 1753
Query: 310 KLT 312
+ +
Sbjct: 1754 EFS 1756
Score = 124 bits (308), Expect = 1e-27
Identities = 86/238 (36%), Positives = 129/238 (54%), Gaps = 10/238 (4%)
Query: 4 IEVKNLRKLY-----PKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIK 58
I V NL K Y K F K A+ + + G+ LLG NGAGK+TT
Sbjct: 584 INVVNLTKTYGTSFFKKLFDCKFGKSGEKRAVSNLNLKMYPGQCTVLLGHNGAGKSTTFS 643
Query: 59 ILTTLLEPTSGEARVLGFDIVKEAREIRKRINLVAEGERTLYWRLTAYENLRYFASIYYV 118
+LT + P+SG A V FDI +IR+ + L + TL+ +T E+L +FA +
Sbjct: 644 MLTGVASPSSGSAYVNDFDIRTSLPKIRREMGLCPQ-YNTLFGFMTVMEHLEFFAKLK-- 700
Query: 119 PKKVAEERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLD 178
+ E R +L + + + D + S G K++L++A ALI EV+ LDEPT G+D
Sbjct: 701 ERTWDPEEAREILARLRIDFKADFMAGALSGGQKRKLSLAIALIGGSEVVMLDEPTSGMD 760
Query: 179 VQSAIFVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRIIALDTPEGLKK 236
+ LI++ E+E++T+LLTTH+M EA+ L DRIAI+ HG++ +P LK+
Sbjct: 761 PGARHETWTLIQR--EKERRTILLTTHFMEEADLLGDRIAIMAHGQLECCGSPMFLKQ 816
>emb|CAB99138.1| (AL390188) putative ABC transport system ATP-binding protein
[Streptomyces coelicolor A3(2)]
Length = 306
Score = 122 bits (304), Expect = 4e-27
Identities = 97/320 (30%), Positives = 157/320 (48%), Gaps = 35/320 (10%)
Query: 1 MKAIEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKIL 60
M +I+V++L K Y + A+ ++F V+ G + G LGPNGAGK+TT++++
Sbjct: 1 MTSIDVRDLTKDYGTR-----------RAVDDLSFTVRPGRVTGFLGPNGAGKSTTMRLV 49
Query: 61 TTLLEPTSGEARVLGFDIVKEAREIRKRINLV----AEGERTLYWRLTAYENLRYFASIY 116
L PT+G A V G +R L+ A G RT A ++LR A+
Sbjct: 50 LGLDRPTAGTATVGGRPYTALDEPLRLVGALLDADCAHGSRT------ARDHLRVLAASN 103
Query: 117 YVPKKVAEERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLG 176
+P + R+ ++ G+ V YS GM+QRL IA AL+ DPEV+ LDEP+ G
Sbjct: 104 RLPAR----RVDEVMEQTGIAAVARRRVRTYSLGMRQRLGIAAALLGDPEVVMLDEPSNG 159
Query: 177 LDVQSAIFVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRIIALDTPEGLKK 236
LD + +++R L++ L E +TVL+++H M+E D + ++ GR++A DTP ++
Sbjct: 160 LDPEGIVWIRGLLRGLA-AEGRTVLVSSHLMNETASFVDHLVVLGRGRLLA-DTP--MRN 215
Query: 237 LVRKDTIVEVRVKNYNGENPFGLAKIKEEGEKVVLRG----PLDEEDIPKLVEFLVKNNA 292
+ D V+ RV+ + A + G V + + + L
Sbjct: 216 FI--DARVQPRVRIRTSDATALKAALARHGHDAVEHDEGYWTVRHARVEDVGRILSGAGV 273
Query: 293 KVLSVEVKEPTLEDVFIKLT 312
VL + E TLE ++ LT
Sbjct: 274 PVLELASAEGTLEQAYLDLT 293
>sp|P19844|NOSF_PSEST COPPER TRANSPORT ATP-BINDING PROTEIN NOSF >gi|95000|pir||S13584
nosF protein - Pseudomonas stutzeri
>gi|45849|emb|CAA37716.1| (X53676) ATP-binding protein,
peripheral [Pseudomonas stutzeri]
Length = 308
Score = 122 bits (303), Expect = 6e-27
Identities = 97/323 (30%), Positives = 160/323 (49%), Gaps = 47/323 (14%)
Query: 1 MKAIEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKIL 60
M A+E++ + + Y L + N+ +GE+ GL G NGAGKTT++K++
Sbjct: 1 MNAVEIQGVSQRYGS-----------MTVLHDLNLNLGEGEVLGLFGHNGAGKTTSMKLI 49
Query: 61 TTLLEPTSGEARVLGFDIVKEAREIRKRINLVAEGERTLYWRLTAYENLRYFASIYYVPK 120
LL P+ G+ +VLG ++R+++ + E T Y +L+ E LR+FA + K
Sbjct: 50 LGLLSPSEGQVKVLGR--APNDPQVRRQLGYLPENV-TFYPQLSGRETLRHFARL----K 102
Query: 121 KVAEERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQ 180
A ++ LL VGL D V YS+GM+QRL +A+AL+ +P +L LDEPT+GLD
Sbjct: 103 GAALTQVDELLEQVGLAHAADRRVKTYSKGMRQRLGLAQALLGEPRLLLLDEPTVGLDPI 162
Query: 181 SAIFVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRIIA------LDTPEGL 234
+ + LI +L + +++L +H + E +R AI+ G + A L GL
Sbjct: 163 ATQDLYLLIDRL-RQRGTSIILCSHVLPGVEAHINRAAILAKGCLQAVGSLSQLRAEAGL 221
Query: 235 KKLVRKDTIVE----VRVKNYNGENPFGLAK-----IKEEGEKVVLRGPLDEEDIPKLVE 285
+R I E ++ G + GL++ + G K+VL L E P+
Sbjct: 222 PVRIRASGISERDSWLQRWTDAGHSARGLSESSIEVVAVNGHKLVLLRQLLGEGEPE--- 278
Query: 286 FLVKNNAKVLSVEVKEPTLEDVF 308
+E+ +P+LED++
Sbjct: 279 ----------DIEIHQPSLEDLY 291
>pir||T45265 cobalt transport ATP-binding protein O homolog [imported] -
Methanobacterium thermoautotrophicum
>gi|1419078|emb|CAA63958.1| (X94292) cbiO
[Methanobacterium thermoautotrophicum]
Length = 277
Score = 122 bits (303), Expect = 6e-27
Identities = 83/234 (35%), Positives = 126/234 (53%), Gaps = 15/234 (6%)
Query: 1 MKAIEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKIL 60
MK IE N+R YP + EALKGI F+ KKGE+ LLGPNGAGK+T
Sbjct: 1 MKIIEAVNIRYTYP----------DGTEALKGIDFHAKKGEVVALLGPNGAGKSTLFLHF 50
Query: 61 TTLLEPTSGEARVLGFDIVKEAR---EIRKRINLVAEGERTLYWRLTAYENLRYFASIYY 117
+L+PTSG+ V G +I ++R+++ +V + + E++ +
Sbjct: 51 NGILQPTSGKVLVDGKEIDYSKSGLIKVRQKVGIVFQNPDDQLFAPRVDEDVAFGPLNMG 110
Query: 118 VPKKVAEERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGL 177
+ + EER+++ L VG+ + D + S G K+R+AIA L P+++ LDEPT GL
Sbjct: 111 LDEDEVEERVKDALRKVGMSGTRTD-PHHLSGGEKKRVAIAGILAMKPDIMILDEPTSGL 169
Query: 178 DVQSAIFVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRIIALDTP 231
D + A + L+ +L EE T++++TH + A DRI II G II+ TP
Sbjct: 170 DPRGASQILRLLHEL-NEEGMTIIISTHDVDLAPLYSDRIYIISGGEIISEGTP 222
>pir||D75447 ABC transporter, ATP-binding protein - Deinococcus radiodurans
(strain R1) >gi|6458742|gb|AAF10588.1|AE001953_2
(AE001953) ABC transporter, ATP-binding protein
[Deinococcus radiodurans]
Length = 307
Score = 121 bits (301), Expect = 1e-26
Identities = 75/224 (33%), Positives = 112/224 (49%), Gaps = 14/224 (6%)
Query: 3 AIEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKILTT 62
A+EV+ L K Y + L + NV GE++ L GPNGAGKTT I++LT
Sbjct: 11 AVEVRGLSKSYGRA-----------NVLTDVFLNVIPGEVYALTGPNGAGKTTLIRMLTG 59
Query: 63 LLEPTSGEARVLGFDIVKEAREIRKRINLVAEGERTLYWRLTAYENLRYFASIYYVPKKV 122
L PT GE R++G ++ + R + V E Y + T ENL+ AS+ V
Sbjct: 60 LAFPTRGEVRIMGVNVHTDGPRARALMGAVVEAPAKFYPQFTGTENLKIHASL--TGAGV 117
Query: 123 AEERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQSA 182
RI +L ++ L V YS G +QRL +A A++ +P+VL LDEPT GLD
Sbjct: 118 GPGRISEVLALLELTSMGGRRVAEYSLGQRQRLGVASAILAEPKVLILDEPTSGLDPLGI 177
Query: 183 IFVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRII 226
+ ++ L V+L+TH++ E + I+ GR++
Sbjct: 178 GLIHRIVTSLA-TSGCAVILSTHHLREIATYAHTVGIMTGGRLV 220
>emb|CAB94566.1| (AL359152) putative ABC transporter ATP-binding subunit
[Streptomyces coelicolor A3(2)]
Length = 346
Score = 120 bits (299), Expect = 2e-26
Identities = 90/320 (28%), Positives = 155/320 (48%), Gaps = 33/320 (10%)
Query: 4 IEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKILTTL 63
IE++ L K Y +K+ A+ ++F V+ G + G LGPNGAGK+TT++++ L
Sbjct: 18 IELEGLTKRYGEKV-----------AVNNLSFTVRPGIITGFLGPNGAGKSTTMRMVLGL 66
Query: 64 LEPTSGEARVLGFDIVKEAREIRKRINLVAEGERTLYWR--LTAYENLRYFASIYYVPKK 121
PT+G+ R+ G K E++ + + W +AY +L A +P
Sbjct: 67 DRPTAGDVRIDG----KHYDELKDPLTYIGALLEAKAWHGGRSAYNHLLCLAQSNGIPAS 122
Query: 122 VAEERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQS 181
R+R +L VGL +S GM QRL IA AL+ DP +L DEP GLD +
Sbjct: 123 ----RVRQVLDTVGLSAVARKKTKGFSLGMGQRLGIAGALLGDPRILMFDEPVNGLDPEG 178
Query: 182 AIFVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRIIALDTPEGLKKLVRKD 241
++R L+K L + +TV +++H M E D + +I GR++A DT + + + ++
Sbjct: 179 IHWIRNLMKTLA-SQGRTVFVSSHLMSEMALTADHLVVIGQGRLLA-DT--SMAEFIAEN 234
Query: 242 TIVEVRVKNYNGENPFGL-----AKIKEEGEKVVLRGPLDEEDIPKLVEFLVKNNAKVLS 296
+ VR++ E + E GE V+ +D + + E ++ +
Sbjct: 235 SRSYVRIRTPQREQLLDALHAAGVTVVESGEGVL---EVDGDKSETVGELAARHQVVLYE 291
Query: 297 VEVKEPTLEDVFIKLTGRGL 316
+ + +LE+ F++LT +
Sbjct: 292 LSPQRASLEEAFMQLTAESV 311
>gb|AAK41416.1| Sugar ABC transporter [Sulfolobus solfataricus]
Length = 368
Score = 120 bits (298), Expect = 2e-26
Identities = 80/295 (27%), Positives = 151/295 (51%), Gaps = 16/295 (5%)
Query: 1 MKAIEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKIL 60
M ++++N+ K Y +K RK++ L+G+ ++KGE +LGP+G GKTT +KI+
Sbjct: 2 MSYVKLENIWKEYEEKK----RKVQ---VLRGLNLEIEKGEFVVILGPSGEGKTTILKII 54
Query: 61 TTLLEPTSGEARVLGFDIVKEAREIRKRINLVAEGERTLYWRLTAYENLRYFASIYYVPK 120
LL G + G ++V + +R+ +V + +Y ++ Y+N+ + + ++ K
Sbjct: 55 AGLLRQDKGHVYLRG-EVVDDLPPKDRRVAMVPQNY-AIYPFMSVYDNIAFPLKVMHLSK 112
Query: 121 KVAEERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQ 180
++R+ + M+ + + + S G QR+AIA+AL+ +++ +DEP LD Q
Sbjct: 113 DEIKKRVLEVARMLRIDNLLERKPSQLSGGQMQRVAIARALVKGADIILMDEPLSNLDAQ 172
Query: 181 SAIFVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRIIALDTPEGLKKLVRK 240
+ RE +K+L + K T++ TH EA L ++AI+ G + A P + K
Sbjct: 173 VRVVAREELKQLQRDLKPTIIYVTHDQVEALSLATKVAILHDGVVQAYGDPMEIYKRPN- 231
Query: 241 DTIVEVRVKNYNGENPFGLAKIKEEGEKVVLRGPLDEEDIPKLVEFLVKNNAKVL 295
V ++ G P + + + EG+ +++ +P+ + LVKN KVL
Sbjct: 232 ----SAWVGSFLGNPPMNIIRGEIEGDSIIIDS--YRIGLPEEYKNLVKNGQKVL 280
>pir||T36764 probable ABC-type transport system ATP-binding protein -
Streptomyces coelicolor >gi|5531452|emb|CAB50957.1|
(AL096849) putative ABC-transporter ATP-binding protein
[Streptomyces coelicolor A3(2)]
Length = 306
Score = 120 bits (298), Expect = 2e-26
Identities = 93/314 (29%), Positives = 153/314 (48%), Gaps = 26/314 (8%)
Query: 3 AIEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKILTT 62
AI V+ L K Y + A+ ++F V G + G GPNGAGKTT +K +
Sbjct: 12 AIRVEGLTKRYGRAT-----------AVDDLSFTVGTGRVTGFFGPNGAGKTTALKAVVG 60
Query: 63 LLEPTSGEARVLGFDIVKEAREIRKR-INLVAEGERTLYWRLTAYENLRYFASIYYVPKK 121
L PT+G A V G + + R +++ G T +LR A++ +P++
Sbjct: 61 LARPTAGRAFVRGTPVAALKPDARLLGVHIEPCGAHP---GRTGRAHLRSLAALAGLPRR 117
Query: 122 VAEERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQS 181
R+ +L +VGL + V YS GM+QRL +A AL+ DPE+L LDEP GLD Q
Sbjct: 118 ----RVGEVLELVGLEEAARGRVGKYSMGMRQRLGLAAALLGDPEILVLDEPVNGLDPQG 173
Query: 182 AIFVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRIIALDTPEGLKKLVRKD 241
++R L+++ + TVLL++H + EA + D + +I+ GR++ L++ +
Sbjct: 174 IRWLRTLLRERA-AKGGTVLLSSHMLGEAAQTVDDVVVINRGRLVHEGAIRDLERSGERV 232
Query: 242 TIVEVRVKNYNGE--NPFGLAKIKEEGEKVVLRGPLDEEDIPKLVEFLVKNNAKVLSVEV 299
V E G ++G ++++ G LD ++ +L ++ V +
Sbjct: 233 VAVRTAEAERLSELVTAAGGRTKTDDGGRLLVEG-LDVTEVARLAH---RDGVLVEEITE 288
Query: 300 KEPTLEDVFIKLTG 313
+ +LED F LTG
Sbjct: 289 RTASLEDAFFGLTG 302
>pir||E81337 ABC-transporter ATP-binding protein Cj0669 [imported] -
Campylobacter jejuni (strain NCTC 11168)
>gi|6968131|emb|CAB72946.1| (AL139076) ABC-transporter
ATP-binding protein [Campylobacter jejuni]
Length = 242
Score = 120 bits (297), Expect = 3e-26
Identities = 72/228 (31%), Positives = 124/228 (53%), Gaps = 13/228 (5%)
Query: 1 MKAIEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKIL 60
M +E+ NL K+ K + + GI+ V GE+ GLLGPNGAGKTTT ++
Sbjct: 1 MSKLEIVNLEKIIKKT-----------KIIHGISLEVNSGEVVGLLGPNGAGKTTTFYMI 49
Query: 61 TTLLEPTSGEARVLGFDIVKEAREIRKRINL-VAEGERTLYWRLTAYENLRYFASIYYVP 119
L+ P+SG+ + G D+ K+ R R + E +++ L+ +NL A I+Y
Sbjct: 50 CGLISPSSGKVLLDGLDVTKDPLNKRARSGIGYLPQESSIFKDLSVEDNLLLAAQIFYKD 109
Query: 120 KKVAEERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDV 179
KK+ +++ +L ++ + + ++ S G ++R IA++L+ +P+ L LDEP G+D
Sbjct: 110 KKILHDKVEQMLELLSIEPIRLRKGLSLSGGERRRCEIARSLMCEPKFLLLDEPFAGVDP 169
Query: 180 QSAIFVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRIIA 227
+ ++ LIK+L + VL+T H + E +CDR +I G ++A
Sbjct: 170 IAVAEIQTLIKEL-KRLGIGVLITDHNVRETLAICDRAYVIRSGSLLA 216
>pir||H69746 ABC transporter (binding protein) homolog ybdA - Bacillus subtilis
>gi|2632481|emb|CAB11989.1| (Z99105) similar to ABC
transporter (binding protein) [Bacillus subtilis]
>gi|3599617|dbj|BAA33092.1| (AB006424) ybdA [Bacillus
subtilis]
Length = 239
Score = 119 bits (296), Expect = 4e-26
Identities = 74/229 (32%), Positives = 131/229 (56%), Gaps = 21/229 (9%)
Query: 1 MKAIEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKIL 60
M+ ++V+NL K Y + ++ ++F++++GE+ LLGPNGAGKTTTI+ L
Sbjct: 1 MQLMQVQNLSKCYRNG-----------DGVEHLSFSIQRGEIVALLGPNGAGKTTTIRCL 49
Query: 61 TTLLEPTSGEARVLGF---DIVKEAREIRKRINLVAEGERTLYWRLTAYENLRYFASIYY 117
T L +P G+ + G DI ++K++ L+ + + LY LTA E++++ A Y+
Sbjct: 50 TGLYKPDKGDILIEGSPPGDI-----NVQKKVALIPD-QPYLYPALTAAEHIQFRARGYH 103
Query: 118 VPKKVAEERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGL 177
KK +ER+ + L V L ++ + L SRG KQR+ +A A++ D + LDEPT+GL
Sbjct: 104 PGKKDVKERVYHALKEVHLEEKANQLCGQLSRGQKQRVVLAGAIVQDALLYILDEPTVGL 163
Query: 178 DVQSAIFVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRII 226
D+ S ++ +K ++ + ++TH + E DR+ +I G+++
Sbjct: 164 DIPSKQWLSNWLKTKT-DQGCSAFVSTHSLEFVIETADRVILIRDGKLM 211
>pir||D71179 probable sugar ABC transporter - Pyrococcus horikoshii
>gi|3258144|dbj|BAA30827.1| (AP000007) 498aa long
hypothetical sugar transport ATP-binding protein
[Pyrococcus horikoshii]
Length = 498
Score = 119 bits (296), Expect = 4e-26
Identities = 85/264 (32%), Positives = 147/264 (55%), Gaps = 36/264 (13%)
Query: 1 MKAIEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKIL 60
M A+E++ + K+YP + ALKG+ F V++GE+ GLLG NGAGK+T ++IL
Sbjct: 1 MLAVEMRRIYKVYPDGVV----------ALKGVDFTVEEGEIHGLLGENGAGKSTLMRIL 50
Query: 61 TTLLEPTSGEARVLGFDIVKEA--REIRKRINLVAEGERTLYWRLTAYENLRYFASIYYV 118
++PT GE +V G + IRK I +V + TL T ENL Y + +
Sbjct: 51 YGEIKPTKGEVKVFGDKVEFNGPWDAIRKGIAMVYQ-HFTLIPTFTVLENL-YLSMLTIN 108
Query: 119 P-------KKVAEERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLD 171
P +K+A+E+++++ V L DD+V + G++QR+ I KAL+ + ++L LD
Sbjct: 109 PNITINEVRKLAKEKMKDIGFSVPL----DDVVEDLPIGIQQRVEIIKALMANAKILILD 164
Query: 172 EPTLGLDVQSAIFVRELIKKL--VEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRIIALD 229
EPT V + + V EL K L ++E TV+ TH + E +E+ DR+ ++ G ++ +
Sbjct: 165 EPT---SVLTPLEVEELFKTLRKLKENGITVIFITHKLKEVKEITDRVTVLRRGEVVGVA 221
Query: 230 TPEGL------KKLVRKDTIVEVR 247
+ + K +V+++ ++E++
Sbjct: 222 KTKEVSERDLAKMMVQREIVMEIK 245
Score = 79.2 bits (192), Expect = 6e-14
Identities = 58/218 (26%), Positives = 115/218 (52%), Gaps = 18/218 (8%)
Query: 28 EALKGITFNVKKGELFGLLGPNGAGKTTTIKILTTLLEPTSGEARVLGFDIVKEAREIRK 87
+A+KG++F +K+GE+ G+ G G G+ + L + G +LG D+ + + + R
Sbjct: 270 DAVKGVSFELKEGEILGIAGVQGNGQKELAEALAGIRRIEKGRIELLGRDVTELSADKRY 329
Query: 88 RINL--VAEGERT-LYWRLTAYENLRYFASIYYVPKKVAEERIR-NLLHMVG--LWDRKD 141
+ L V + + L ++ EN+ + +P + RI + +G + +R D
Sbjct: 330 KAGLAYVPDSRKVGLVLDMSVVENV----ILTNLPSVMRGRRISWEKANKIGKEIVERFD 385
Query: 142 DLVMNYSR-------GMKQRLAIAKALINDPEVLFLDEPTLGLDVQSAIFVRELIKKLVE 194
LV + S G +Q++ + + +I +P+V+ + EPT GLD+ + F+R+ + L +
Sbjct: 386 VLVSSLSTPIKHLSGGNQQKVMVGREIIREPKVVIVSEPTQGLDIGATEFIRKTLVSLRD 445
Query: 195 EEKKTVLLTTHYMHEAEELCDRIAIIDHGRIIALDTPE 232
+ K +L++T + E +L DRIA++ G+I+A+ E
Sbjct: 446 QGKGILLISTD-LDEILQLSDRIAVMYEGKIMAIGKVE 482
>pir||E72378 sugar ABC transporter, ATP-binding protein - Thermotoga maritima
(strain MSB8) >gi|4980927|gb|AAD35506.1|AE001721_5
(AE001721) sugar ABC transporter, ATP-binding protein
[Thermotoga maritima]
Length = 359
Score = 119 bits (296), Expect = 4e-26
Identities = 78/235 (33%), Positives = 120/235 (50%), Gaps = 19/235 (8%)
Query: 1 MKAIEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKIL 60
M +I V NL+K + K +A+ G++F VK GE LLGP+G GKTTT+ +L
Sbjct: 1 MPSIRVVNLKKYFGK-----------VKAVDGVSFEVKDGEFVALLGPSGCGKTTTLLML 49
Query: 61 TTLLEPTSGEAR---VLGFDIVKEAREIRKRINLVAEGERTLYWRLTAYENLRYFASIYY 117
+ +PTSGE VL DI + RE+ A LY +T +EN+ +
Sbjct: 50 AGIYKPTSGEIYFDDVLVNDIPPKYREVGMVFQNYA-----LYPHMTVFENIAFPLRARR 104
Query: 118 VPKKVAEERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGL 177
+ K E+R+ + + + + D S G +QR+A+A+AL+ P+VL DEP L
Sbjct: 105 ISKDEVEKRVVEIARKLLIDNLLDRKPTQLSGGQQQRVALARALVKQPKVLLFDEPLSNL 164
Query: 178 DVQSAIFVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRIIALDTPE 232
D + +R IK L +E T + TH EA + RIA+ + G+++ TP+
Sbjct: 165 DANLRMIMRAEIKHLQQELGITSVYVTHDQAEAMTMASRIAVFNQGKLVQYGTPD 219
>pir||E72636 probable nodulation ATP-binding protein I APE1548 - Aeropyrum
pernix (strain K1) >gi|5105233|dbj|BAA80547.1|
(AP000061) 338aa long hypothetical nodulation
ATP-binding protein I [Aeropyrum pernix]
Length = 338
Score = 119 bits (296), Expect = 4e-26
Identities = 87/288 (30%), Positives = 149/288 (51%), Gaps = 13/288 (4%)
Query: 29 ALKGITFNVKKGELFGLLGPNGAGKTTTIKILTTLLEPTSGEARVLGFDIVKEA-REIRK 87
A+ G++F+V GE ++GPNG+GKTT +++++ +L P+ G RV G+D+ + RE R
Sbjct: 57 AVAGVSFSVGDGERACIMGPNGSGKTTLLRMVSGVLRPSGGSVRVCGYDVWGDGWREARG 116
Query: 88 RINLVAEGERTLYWRLTAYENLRYFASIYYVPKKVAEERIRNLLHMVGLWDRKDDLVMNY 147
I A + + R+T E + + + VA R +L M+G D +V
Sbjct: 117 LIGF-APQDPPMARRMTGAEYITVVGGLLGLSPGVARREARRVLEMLGFEDVLGRVVARL 175
Query: 148 SRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQSAIFVRELIKKLVEEEKKTVLLTTHYM 207
S G ++ L IA AL ++PEV+ LDEP GLDV++ + ++K + +TVL ++H
Sbjct: 176 SGGQRRALGIALALASNPEVVVLDEPGSGLDVRARESLWASLRKAF--KGRTVLFSSHDP 233
Query: 208 HEAEELCDRIAIIDHGRIIALDTPEGLKKLVRKDTIVEVRVKNYNGENPFGLAKIKEEG- 266
EAE DR+ I+ GR+ A P ++L+++ + RV+ + P GL +
Sbjct: 234 QEAEAESDRVLIMHRGRLAAWGKP---RELIQR-YAPKPRVRVWADRAPDGLEPVHTGPG 289
Query: 267 -EKVVLRGPLDEEDIPKLVEFLVKNNAKVLSVEVKEPTLEDVFIKLTG 313
++ P D+ ++ V +EV +P+L +VF +TG
Sbjct: 290 FSDYLIEAP---GDVARIASAYSGAGILVERIEVLKPSLREVFFAVTG 334
>sp|P26946|YATR_BACFI HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PROTEIN
>gi|98114|pir||S15486 probable ABC-type transport
protein - Bacillus firmus >gi|39478|emb|CAA42056.1|
(X59424) ATP binding protein of transport ATPases
[Bacillus firmus]
Length = 267
Score = 118 bits (292), Expect = 1e-25
Identities = 86/273 (31%), Positives = 144/273 (52%), Gaps = 14/273 (5%)
Query: 45 LLGPNGAGKTTTIKILTTLLEPTSGEARVLGFDIVKEAREIRKRINLVAEGERTLYWRLT 104
+LG NGAGKTTT +++ LLEPT GE G I + I + E ER LY +L
Sbjct: 1 MLGANGAGKTTTFRMMLGLLEPTEGEMTWKGEKIDYPRTNV---IGYLPE-ERGLYPKLK 56
Query: 105 AYENLRYFASIYYVPKKVAEERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALIND 164
+ L Y + + KK +R L + D + + S+G +Q++ ++I+
Sbjct: 57 VRDQLIYLGRLKGMHKKDIIPEMRMWLERFKVTDYETKRIEELSKGNQQKIQFIASVIHR 116
Query: 165 PEVLFLDEPTLGLDVQSAIFVRELIKKLVEEEKK---TVLLTTHYMHEAEELCDRIAIID 221
PE+L LDEP GLD +A EL+K+ V + KK T++ ++H M EELC + I+
Sbjct: 117 PELLILDEPFSGLDPVNA----ELLKEAVIDLKKKGTTIVFSSHRMDHVEELCQHLCILR 172
Query: 222 HGRIIALDTPEGLKKLVRKDTIVEVRVKNYNG-ENPFGLAKIKEEGEKVVLRGPLDEEDI 280
HG + +K+ R IV +++ +N G+ K +++ V L+ +++E++
Sbjct: 173 HGTPVVKGELREIKRSFRNKFIVIEGERSFETLKNLPGVKKFQQKQGGVRLQ--VEDEEV 230
Query: 281 PKLVEFLVKNNAKVLSVEVKEPTLEDVFIKLTG 313
K++ V + V +EV+EP+L+D+FI+ G
Sbjct: 231 AKVIFAEVAKSGYVRRLEVEEPSLQDIFIEKVG 263
>sp|Q45460|OPBA_BACSU CHOLINE TRANSPORT ATP-BINDING PROTEIN OPUBA >gi|7442619|pir||G69669
choline ABC transporter (ATP-binding protein) opuBA -
Bacillus subtilis >gi|2293447|gb|AAC14356.1| (AF008930)
ATPase [Bacillus subtilis] >gi|2635886|emb|CAB15378.1|
(Z99121) choline ABC transporter (ATP-binding protein)
[Bacillus subtilis]
Length = 381
Score = 118 bits (292), Expect = 1e-25
Identities = 92/323 (28%), Positives = 159/323 (48%), Gaps = 39/323 (12%)
Query: 28 EALKGITFNVKKGELFGLLGPNGAGKTTTIKILTTLLEPTSGEARVLGFDIV-KEAREIR 86
+A+ + + KGE +GP+G GKTTT+K++ L+EP++G+ + G +I+ ++ E+R
Sbjct: 16 KAVNNVNLKIAKGEFICFIGPSGCGKTTTMKMINRLIEPSAGKIFIDGENIMDQDPVELR 75
Query: 87 KRINLVAEGERTLYWRLTAYENLRYFASIYYVPKKVAEERIRNLLHMVGLW-DRKDDLVM 145
++I V + + L+ +T +N+ + P++ +ER R LL +V + + D
Sbjct: 76 RKIGYVIQ-QIGLFPHMTIQQNISLVPKLLKWPEQQRKERARELLKLVDMGPEYVDRYPH 134
Query: 146 NYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQSAIFVRELIKKLVEEEKKTVLLTTH 205
S G +QR+ + +AL +P ++ +DEP LD + ++E KKL + KT++ TH
Sbjct: 135 ELSGGQQQRIGVLRALAAEPPLILMDEPFGALDPITRDSLQEEFKKLQKTLHKTIVFVTH 194
Query: 206 YMHEAEELCDRIAIIDHGRIIALDTPE---------------GLKKLVRKDTIVEVRVKN 250
M EA +L DRI I+ G I+ + TP+ G ++L++ + RV
Sbjct: 195 DMDEAIKLADRIVILKAGEIVQVGTPDDILRNPADEFVEEFIGKERLIQSSSPDVERVDQ 254
Query: 251 YNGENPFGLAKIKEEGEKVVLRGPLDEEDIPKLVEFLVKNNAKVL----SVE-------- 298
P + K E + L + +E + L LV N+ +VL VE
Sbjct: 255 IMNTQPVTITADKTLSEAIQL---MRQERVDSL---LVVNDERVLQGYVDVEIIDQCRKK 308
Query: 299 ---VKEPTLEDVFIKLTGRGLRD 318
V E ED++ L G LRD
Sbjct: 309 ANLVSEVLHEDIYTVLGGTLLRD 331
>pir||C69819 ABC transporter (ATP-binding protein) homolog yhaQ - Bacillus
subtilis >gi|2226131|emb|CAA74424.1| (Y14078)
Hypothetical protein [Bacillus subtilis]
>gi|2633325|emb|CAB12829.1| (Z99109) similar to ABC
transporter (ATP-binding protein) [Bacillus subtilis]
Length = 298
Score = 117 bits (291), Expect = 1e-25
Identities = 78/292 (26%), Positives = 151/292 (51%), Gaps = 16/292 (5%)
Query: 27 FEALKGITFNVKKGELFGLLGPNGAGKTTTIKILTTLLEPTSGEARVLGFDIVKEAREIR 86
++A+ G+ ++ + ++FGLLG NGAGKTTT +++ LL T G G + I
Sbjct: 14 YKAVDGLDLDIPEQQMFGLLGANGAGKTTTFRMILGLLSITEGSISWKGRPV---NYHIS 70
Query: 87 KRINLVAEGERTLYWRLTAYENLRYFASIYYVPKKVAEERIRNLLHMVGLWDRKDDLVMN 146
+I + E ER LY ++ + L Y A + + K+ A + + L + D ++ V
Sbjct: 71 NKIGYLPE-ERGLYPKMKVRDQLVYLARLKGMEKREAVKELGTWLERFNITDYENKKVEE 129
Query: 147 YSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQSAIFVRELIKKLVEEEKKTVLLTTHY 206
++G +Q++ A+++ PE+L LDEP GLD + ++E + L + ++L ++H
Sbjct: 130 LAKGNQQKIQFISAVLHKPELLILDEPFSGLDPVNVELLKEAVISL-KNSGVSILFSSHR 188
Query: 207 MHEAEELCDRIAIIDHGRIIALDTPEGLKKLVRKDTIV-----EVRVKNYNGENPFGLAK 261
M EELC+ + I+ G+ + + +K+ K + ++R ++ G+ +
Sbjct: 189 MEHVEELCENLCILQKGKPVVQGKLKEIKRSFGKKNVTIHSDDDLRFL----QSHEGILQ 244
Query: 262 IKEEGEKVVLRGPLDEEDIPKLVEFLVKNNAKVLSVEVKEPTLEDVFIKLTG 313
KE + V L+ + EDI + + +++ + E++EP+L D+FI+ G
Sbjct: 245 WKETADGVKLQ--IANEDISQEIFAMLQGKGFIRKFELEEPSLHDIFIEKVG 294
>pir||T14167 ABC transport protein - Mycobacterium smegmatis
>gi|3560509|gb|AAC82552.1| (AF027770) unknown
[Mycobacterium smegmatis]
Length = 284
Score = 117 bits (291), Expect = 1e-25
Identities = 84/252 (33%), Positives = 128/252 (50%), Gaps = 12/252 (4%)
Query: 71 ARVLGFDIVKEAREIRKRINLVAEGERTLYWRLTAYENLRYFASIYYVPKKVAEERIRNL 130
+ +LG D + + +R+RI ++ +G Y A E L AS P A L
Sbjct: 39 SEILGLDPIADNARLRERIGVMLQGGGG-YPAARAGEMLDLVASYAADPLDPAW-----L 92
Query: 131 LHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQSAIFVRELIK 190
+ +GL D S G +QRLA+A A++ PE++FLDEPT G+D + I V ELI
Sbjct: 93 MDTLGLTDSARTTYRRLSGGQQQRLALACAVVGRPELVFLDEPTAGMDAHARIVVWELID 152
Query: 191 KLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRIIALDTP-----EGLKKLVRKDTIVE 245
L + TV+LTTH + EAEEL DRI IIDHG +A TP G + +R +
Sbjct: 153 AL-RRDGVTVVLTTHQLTEAEELADRIVIIDHGVAVATGTPAELMRSGAENQLRFSAPRK 211
Query: 246 VRVKNYNGENPFGLAKIKEEGEKVVLRGPLDEEDIPKLVEFLVKNNAKVLSVEVKEPTLE 305
+ + P G ++ + ++ G +D + + + + + N + V++ +LE
Sbjct: 212 LDLSLLVAALPEGYNAVEAAPGEYLVEGHIDPQVLATVTAWCARVNVLATDMRVEQRSLE 271
Query: 306 DVFIKLTGRGLR 317
DVF+ LTGR LR
Sbjct: 272 DVFLDLTGRELR 283
>pir||H72356 amino acid ABC transporter, ATP-binding protein - Thermotoga
maritima (strain MSB8)
>gi|4981110|gb|AAD35676.1|AE001734_3 (AE001734) amino
acid ABC transporter, ATP-binding protein [Thermotoga
maritima]
Length = 242
Score = 116 bits (288), Expect = 3e-25
Identities = 76/234 (32%), Positives = 125/234 (52%), Gaps = 15/234 (6%)
Query: 1 MKAIEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKIL 60
M +++++L K + K L+GI VKKGE+ ++GP+G+GK+T ++ +
Sbjct: 1 MTVLKIEDLHKYFGK-----------LYVLRGIDLEVKKGEVISIIGPSGSGKSTLLRCI 49
Query: 61 TTLLEPTSGEARVLGFDIV-KEAREIRKRINLVAEGERTLYWRLTAYENLRYFA-SIYYV 118
L E G+ G I + IR I +V + + L+ L+ NL + +
Sbjct: 50 NLLEEYQRGKIYFKGELITHRNINRIRSSIGMVFQ-QFNLFPHLSVLNNLTLAPMKVKNM 108
Query: 119 PKKVAEERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLD 178
K A E+ + LL VGL ++ ++ N S G +QR+AIA+AL+ DPE++ DEPT LD
Sbjct: 109 QKDEAVEKAKKLLERVGLIEKINEKPGNLSGGQQQRVAIARALMMDPELMLFDEPTSALD 168
Query: 179 VQSAIFVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRIIALDTPE 232
+ V ++IK L + T+L+ TH M A ++ DR+ +D GRI+ + PE
Sbjct: 169 PELVKEVLDVIKDLA-QSGMTMLIVTHEMRFARDVSDRVVFMDEGRIVEMGPPE 221
>pir||G81344 ABC transport system ATP-binding protein Cj0732 [imported] -
Campylobacter jejuni (strain NCTC 11168)
>gi|6968189|emb|CAB73006.1| (AL139076) ABC transport
system ATP-binding protein [Campylobacter jejuni]
Length = 329
Score = 116 bits (288), Expect = 3e-25
Identities = 77/256 (30%), Positives = 132/256 (51%), Gaps = 14/256 (5%)
Query: 1 MKAIEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKIL 60
M +++KN +K Y KI + I F+ KKGE LLGP+G GK+T ++ +
Sbjct: 1 MAYLKIKNFKKAYGDKI-----------IFEDINFSAKKGEFITLLGPSGCGKSTLLRCI 49
Query: 61 TTLLEPTSGEARVLGFDIVKEAREIRKRINLVAEGERTLYWRLTAYENLRYFASIYYVPK 120
L + G+ + D+ K + + ++ I +V + L+ L +EN+ + I + K
Sbjct: 50 AGLSQINGGKISLNDKDLTKLSPQ-KRNIGMVFQNY-ALFPNLNVFENVAFGLKIKKMDK 107
Query: 121 KVAEERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQ 180
K E+R++ +L +V L + S G QR+A+A++L+ P++L LDEP LD +
Sbjct: 108 KDIEKRVKKMLKLVELEEYAKTYPHKLSGGQMQRVALARSLVIKPDLLLLDEPLSALDAK 167
Query: 181 SAIFVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRIIALDTPEGLKKLVRK 240
++R IK++ +E + T + TH EA EL D I +++ G+II L L+ +
Sbjct: 168 IRKYLRVQIKEIQKELELTTIFVTHDQEEALELSDTIILMNEGKIIQNSNANNL-YLLPE 226
Query: 241 DTIVEVRVKNYNGENP 256
V + NYN +P
Sbjct: 227 SHFVASFIGNYNILSP 242
>pir||D82147 amino acid ABC transporter, ATP-binding protein VC1864 [imported] -
Vibrio cholerae (group O1 strain N16961)
>gi|9656394|gb|AAF95012.1| (AE004262) amino acid ABC
transporter, ATP-binding protein [Vibrio cholerae]
Length = 256
Score = 116 bits (287), Expect = 4e-25
Identities = 81/249 (32%), Positives = 129/249 (51%), Gaps = 28/249 (11%)
Query: 3 AIEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKILTT 62
A+E+KNL K + + E LKGI+ +KG++ ++G +G+GK+T ++ +
Sbjct: 6 ALEIKNLHKTFGQN-----------EVLKGISLQAQKGDVISIIGSSGSGKSTFLRCINL 54
Query: 63 LLEPTSGEARVLGFDIV--------------KEAREIRKRINLVAEGERTLYWRLTAYEN 108
L PT+GE V G I K+ + IR R+ +V + L+ +T EN
Sbjct: 55 LETPTAGEIWVKGELIQMKTTRQGTVQPAKEKQVQRIRSRLAMVFQSFN-LWSHMTVLEN 113
Query: 109 -LRYFASIYYVPKKVAEERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEV 167
+ + VPK A E+ LL VGL++RKD + S G +QR AIA+AL +PEV
Sbjct: 114 VIEAPVHVLGVPKAQAIEQAERLLRKVGLYERKDYYPGHLSGGQQQRAAIARALAVEPEV 173
Query: 168 LFLDEPTLGLDVQSAIFVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRIIA 227
+ DEPT LD + V +++ L EE +T+L+ TH M A ++ + + + G++
Sbjct: 174 MLFDEPTSALDPELVGEVLGVMRDLA-EEGRTMLVVTHEMAFARDVSNHVMFLHQGKVEE 232
Query: 228 LDTPEGLKK 236
PE L K
Sbjct: 233 QGKPEKLFK 241
>dbj|BAB07632.1| (AP001520) ABC transporter (ATP-binding protein) [Bacillus
halodurans]
Length = 253
Score = 116 bits (287), Expect = 4e-25
Identities = 72/229 (31%), Positives = 123/229 (53%), Gaps = 12/229 (5%)
Query: 1 MKAIEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKIL 60
M +E N+ K Y K+ E LKGI V+KGE ++G +G+GKTT + +L
Sbjct: 1 MAILEATNIHKSYGTKLNKQ-------EVLKGIDIRVEKGEFVSIMGASGSGKTTLLNVL 53
Query: 61 TTLLEPTSGEARVLGFDIV----KEAREIRKRINLVAEGERTLYWRLTAYENLRYFASIY 116
+++ + ++G ++ G ++ KE + RK+ E L LT EN+ SI
Sbjct: 54 SSIDKLSNGSIKIEGSEMTRLKEKELAQFRKKHLGFIFQEYNLLDTLTVKENILLPLSIT 113
Query: 117 YVPKKVAEERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLG 176
+P+K A+E+ + + +G+++ KD S G KQR + A+A I++P ++F DEPT
Sbjct: 114 KIPRKAADEKFKQVATELGIYEIKDKYPNEISGGQKQRASAARAFIHEPSIIFADEPTGA 173
Query: 177 LDVQSAIFVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRI 225
LD +SA + +++L E+ + T+++ TH A C R+ I G+I
Sbjct: 174 LDSKSASDLLGKLQQLNEKLRATIVMVTH-DPVAASYCSRVIFIKDGQI 221
>gb|AAK43169.1| Arabinose ABC transporter, ATP-binding protein [Sulfolobus
solfataricus]
Length = 371
Score = 115 bits (286), Expect = 6e-25
Identities = 86/289 (29%), Positives = 140/289 (47%), Gaps = 26/289 (8%)
Query: 1 MKAIEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKIL 60
M I V+NL K++ K K E +A+ ++ + G FG+LGP+G GKTT ++++
Sbjct: 1 MTTIRVENLSKIFKKG------KTE-VKAVDNVSITIDSGMAFGVLGPSGHGKTTFLRLI 53
Query: 61 TTLLEPTSGEARVLGFDIVKEAREIRKRINLVAEGER--------TLYWRLTAYENLRYF 112
L EPTSG + FD EA +R+ + E LY +T ++N+ +
Sbjct: 54 AGLEEPTSG---YIYFD--NEAVSSPRRVMMSPEKRGIAMVFQNWALYPNMTVFDNIAFP 108
Query: 113 ASIYYVPKKVAEERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDE 172
+ VPK E +++ + +GL + S G QR AIA+AL+ DP+VL LDE
Sbjct: 109 LKLAKVPKDKIENKVKEVSEELGLSGVLNRYPKELSGGQMQRTAIARALVKDPKVLLLDE 168
Query: 173 PTLGLDVQSAIFVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRIIALDTPE 232
P LD Q R L++K+ E K T L+ +H + + ++ +I +G+ + TP
Sbjct: 169 PFSNLDAQIRESARALVRKIQRERKLTTLIVSHDPADIFAIANKAGVIVNGKFAQIGTPT 228
Query: 233 GLKKLVRKDTIVEVRVKNYNGENPFGLAKIKEEGEKVV-LRGPLDEEDI 280
+ + D I + GE AKI E + L+ PL+ ++
Sbjct: 229 EIYEYPATDLIARL-----TGEINLIQAKIIENNAIIANLKVPLNNMEL 272
>pir||D72415 zinc ABC transporter, ATP-binding protein - Thermotoga maritima
(strain MSB8) >gi|4980616|gb|AAD35218.1|AE001698_7
(AE001698) zinc ABC transporter, ATP-binding protein
[Thermotoga maritima]
Length = 240
Score = 115 bits (286), Expect = 6e-25
Identities = 74/243 (30%), Positives = 129/243 (52%), Gaps = 32/243 (13%)
Query: 1 MKAIEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKIL 60
MK +EVKNL +I FE LK +TF+V++GE G++GPNGAGKTT ++IL
Sbjct: 1 MKIVEVKNLTY-----------RINDFEILKNVTFSVEEGEFVGIIGPNGAGKTTLVRIL 49
Query: 61 TTLLEPTSGEARVLG-FDIVKEAREIRKRINLVAEGERTLYWRLTAYENLRYFASIYYVP 119
++ G+ V G + + ++++ + + + +Y
Sbjct: 50 VGDIKNYEGKVEVRGKIGYLPQLHQVQREFPITVKEFAAM--------------GMYGRY 95
Query: 120 KKVAEERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDV 179
+K+ E++R+ L VG+ +++D + N S G QRL++A+AL++DP++L LDEP G+D
Sbjct: 96 RKIDWEKVRSTLKDVGILHKENDPIKNLSGGEFQRLSLARALLSDPDILVLDEPEAGVDE 155
Query: 180 QSAIFVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIID-----HGRIIALDTPEGL 234
EL+ +L +E+ TV++ +H + + C I ++ HG ++ PE L
Sbjct: 156 MGKASFYELLNRLRKEKNITVIMVSHDIGMVFKECSTIMCLNRTLHCHGPTETIN-PEDL 214
Query: 235 KKL 237
KK+
Sbjct: 215 KKI 217
>dbj|BAB04885.1| (AP001511) ABC transporter (ATP-binding protein) [Bacillus
halodurans]
Length = 299
Score = 115 bits (286), Expect = 6e-25
Identities = 85/304 (27%), Positives = 145/304 (46%), Gaps = 30/304 (9%)
Query: 22 RKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKILTTLLEPTSGEARVLGFDIVKE 81
+K F A+ + +V KGE+FG+LG NGAGKTTT +++ LLEPT G +E
Sbjct: 10 KKFGTFTAVNNLHVSVPKGEMFGMLGANGAGKTTTFRMILGLLEPTEGTIH------WRE 63
Query: 82 AREIRKRINLVA--EGERTLYWRLTAYENLRYFASIYYVPKKVAEERIRNLLHMVGLWDR 139
+ N + ER LY +LT + L+Y + + + ++ ++ L + +
Sbjct: 64 QPLTYNQTNCIGYLPEERGLYPKLTVKDQLKYLGRLKGMKTQDIQKEMKMWLERFEVPEY 123
Query: 140 KDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQSAIFVRELIKKLVEEEKK- 198
+ V S+G +Q++ ++++ PE+L LDEP GLD + EL+KK V + KK
Sbjct: 124 EHKRVEQLSKGNQQKIQFIASVLHRPELLILDEPFSGLDPVNV----ELLKKAVIDLKKE 179
Query: 199 --TVLLTTHYMHEAEELCDRIAIIDHGRIIALDTPEGLKKLVRKDTIVEVRVKNYNGENP 256
T+L ++H M EELC + I+ G + + +K+ K KN +
Sbjct: 180 GTTILFSSHRMEHVEELCQHLCILHRGSPVVEGNLKNIKRSFGK--------KNVIIQGE 231
Query: 257 FGL-------AKIKEEGEKVVLRGPLDEEDIPKLVEFLVKNNAKVLSVEVKEPTLEDVFI 309
F L ++ + + + E+ KL+ V V E++EP+L D+F+
Sbjct: 232 FALEPLVDIPGVLRHQETSAGAKFQIANEETAKLLFQAVATAGFVQKFELEEPSLHDIFV 291
Query: 310 KLTG 313
+ G
Sbjct: 292 EKVG 295
>sp|O52618|NODI_RHIME NODULATION ATP-BINDING PROTEIN I >gi|2809541|gb|AAB97762.1|
(AF043118) nodulation ATP-binding protein [Sinorhizobium
meliloti]
Length = 213
Score = 115 bits (284), Expect = 1e-24
Identities = 77/217 (35%), Positives = 116/217 (52%), Gaps = 8/217 (3%)
Query: 104 TAYENLRYFASIYYVPKKVAEERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALIN 163
T ENL F + + + E I +LL L ++ D V + S GMK+RL +A+ALIN
Sbjct: 3 TVRENLLVFGRYFRMSTREIEAVIPSLLEFARLENKADARVSDLSGGMKRRLTLARALIN 62
Query: 164 DPEVLFLDEPTLGLDVQSAIFVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHG 223
DP++L LDEPT GLD + + E ++ L+ KT+LLTTH M EAE LCDR+ +++ G
Sbjct: 63 DPQLLILDEPTTGLDPHARHLIWERLRSLL-ARGKTILLTTHIMEEAERLCDRLCVLEAG 121
Query: 224 RIIALDTPEGLKKLVRKDTIVEVRVKNYNGENPFGLAKIKEEGEKVVLRGP--LDEEDIP 281
IA EG ++ + I ++ Y G+ A + + + G P
Sbjct: 122 HKIA----EGRPHMLIDEKIGCQVIEIYGGDPHELSALVSPHARHIEVSGETVFCYASDP 177
Query: 282 KLVEFLVKNNAKVLSVEVKEPTLEDVFIKLTGRGLRD 318
+ V + A V ++ + P LEDVF++LTGR L+D
Sbjct: 178 EQVRVQLDGRAGVRFLQ-RPPNLEDVFLRLTGRELKD 213
>gi|10954682 probable mikimopine transporter gene~similar to potA gene
[Agrobacterium rhizogenes] >gi|8918682|dbj|BAA97747.1|
(AB039932) hypothetical ABC-transporter gene~similar to
potA gene [Agrobacterium rhizogenes]
>gi|10567346|dbj|BAB16155.1| (AP002086) probable
mikimopine transporter gene~similar to potA gene
[Agrobacterium rhizogenes]
Length = 352
Score = 115 bits (284), Expect = 1e-24
Identities = 75/234 (32%), Positives = 117/234 (49%), Gaps = 13/234 (5%)
Query: 1 MKAIEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKIL 60
M I VKN+ K + F+AL I +V++GE +LGP+G GK+T ++I+
Sbjct: 1 MGEISVKNISKSWAD-----------FKALNNINLDVREGEFLSILGPSGCGKSTLLRII 49
Query: 61 TTLLEPTSGEARVLGFDIVKEAREIRKRINLVAEGERTLYWRLTAYENLRYFASIYYVPK 120
L PT G+ + G + + RK I V + L+ LT ++N+ + PK
Sbjct: 50 AGLESPTDGDIVIAGKQVTNDPVWKRK-IGFVFQNF-ALWPHLTVFKNVAMGLELRKTPK 107
Query: 121 KVAEERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQ 180
++R+ L MV L D L S G +QR+A+A+A++ P+VL LDEP LD
Sbjct: 108 DELQQRVTKALRMVQLEALADRLPSQLSGGQQQRVALARAIVLKPDVLLLDEPLSALDKN 167
Query: 181 SAIFVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRIIALDTPEGL 234
++ +K L T + TH EA L DR+ +++ G I LDTP+ +
Sbjct: 168 LRQDMQVELKALQRTLGLTTVFVTHDQEEALSLSDRVVVMNRGVIEQLDTPDNI 221
>gb|AAA23639.1| (M32101) cysA [Escherichia coli]
Length = 365
Score = 114 bits (283), Expect = 1e-24
Identities = 72/237 (30%), Positives = 127/237 (53%), Gaps = 23/237 (9%)
Query: 3 AIEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKILTT 62
+IE+ N++K + + + L I+ ++ G++ LLGP+G+GKTT ++I+
Sbjct: 2 SIEIANIKKSFGRT-----------QVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAG 50
Query: 63 LLEPTSGEARVLGFDIVK-EAREIRKRINLVAEGERTLYWRLTAYENLRYFASIYYVPKK 121
L TSG R G D+ + AR+ +++ V + L+ +T ++N+ + ++ +P++
Sbjct: 51 LEHQTSGHIRFHGTDVSRLHARD--RKVGFVFQ-HYALFRHMTVFDNIAFGLTV--LPRR 105
Query: 122 ------VAEERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTL 175
+ ++ LL MV L D + S G KQR+A+A+AL +P++L LDEP
Sbjct: 106 ERPNAAAIKAKVTKLLEMVQLAHLADRYPAHVSGGQKQRVALARALAVEPQILLLDEPFG 165
Query: 176 GLDVQSAIFVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRIIALDTPE 232
LD Q +R +++L EE K T + TH EA E+ DR+ ++ G I D P+
Sbjct: 166 ALDAQVRKELRRWLRQLHEELKFTSVFVTHDQEEATEVADRVVVMSQGNIEQADAPD 222
>pir||G69043 cobalt transport ATP-binding protein O - Methanobacterium
thermoautotrophicum (strain Delta H)
>gi|2621173|gb|AAB84639.1| (AE000802) cobalt transport
ATP-binding protein O [Methanobacterium
thermoautotrophicum]
Length = 280
Score = 114 bits (283), Expect = 1e-24
Identities = 76/234 (32%), Positives = 123/234 (52%), Gaps = 14/234 (5%)
Query: 1 MKAIEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKIL 60
M+ IE ++R YP + EAL+GI F+ ++GE+ LLGPNGAGK+T
Sbjct: 3 MRIIEAVDIRYTYP----------DGTEALRGINFHAERGEVVALLGPNGAGKSTLFLHF 52
Query: 61 TTLLEPTSGEARVLG--FDIVKEAR-EIRKRINLVAEGERTLYWRLTAYENLRYFASIYY 117
+L+PTSG+ + G D K + R+++ +V + + E++ +
Sbjct: 53 NGILQPTSGKIMIDGEELDYSKSGLIKARQKVGIVFQNPDDQLFAPRVDEDVAFGPLNMG 112
Query: 118 VPKKVAEERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGL 177
+ + EER+R+ L VG+ + ++S G K+R+AIA + P+++ LDEPT GL
Sbjct: 113 LSEDEVEERVRDALQKVGMLGYESKPPHHFSGGEKKRVAIAGIIAMKPDIMVLDEPTSGL 172
Query: 178 DVQSAIFVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRIIALDTP 231
D + A + L+ L EE T++++TH + A DRI II G II+ P
Sbjct: 173 DPRGASQILRLLHNL-NEEGMTIIISTHDVDLAPLYSDRIYIISDGEIISTGAP 225
>pir||H75161 ribose abc transporter, ATP-binding protein (rbsa) PAB0303 -
Pyrococcus abyssi (strain Orsay)
>gi|5457885|emb|CAB49375.1| (AJ248284) ribose ABC
transporter, ATP-binding protein (rbsA) [Pyrococcus
abyssi]
Length = 498
Score = 114 bits (283), Expect = 1e-24
Identities = 85/263 (32%), Positives = 144/263 (54%), Gaps = 36/263 (13%)
Query: 1 MKAIEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKIL 60
M A+E+ + K+YP + AL+G+ V++GE+ GLLG NGAGK+T ++IL
Sbjct: 1 MTAVEMSGIVKVYPDGVV----------ALRGVNLKVEEGEIHGLLGENGAGKSTLMRIL 50
Query: 61 TTLLEPTSGEARVLGFDIVKEA--REIRKRINLVAEGERTLYWRLTAYENLRYFASIYYV 118
++PT GE +V G ++ IR+ I +V + TL T ENL Y A +
Sbjct: 51 YGEIKPTKGEIKVFGKEVSFNGPWDAIREGIAMVYQ-HFTLVPTFTVLENL-YLAMLSIN 108
Query: 119 P-------KKVAEERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLD 171
P +K+A+E++R + V L + +DL + G++QR+ I KAL+ + ++L LD
Sbjct: 109 PGIKISDVEKLAKEKMREVGFEVPLNEIVEDLPV----GIQQRVEIIKALMLNAKILILD 164
Query: 172 EPTLGLDVQSAIFVRELIKKL--VEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRIIA-- 227
EPT V + I V+EL K L ++E TV+ TH + E +E+ DR+ ++ G ++
Sbjct: 165 EPT---SVLTPIEVKELFKTLRNLKERGITVIFITHKLKEVKEITDRVTVLRRGEVVGTV 221
Query: 228 ----LDTPEGLKKLVRKDTIVEV 246
+ E + +V++D ++E+
Sbjct: 222 KTSEVSERELARMMVQRDVVMEI 244
Score = 85.4 bits (208), Expect = 8e-16
Identities = 59/238 (24%), Positives = 114/238 (47%), Gaps = 58/238 (24%)
Query: 28 EALKGITFNVKKGELFGLLGPNGAGKTTTIKILTTLLEPTSGEARVLGFDIVKEAREIRK 87
+A+KG++F +++GE+ G+ G G G+ + L + P G+ +LG D+ K
Sbjct: 270 DAVKGVSFELREGEILGIAGVQGNGQRELAEALAGIRIPEKGKIELLGKDVTK------- 322
Query: 88 RINLVAEGERTLYWRLTAYENLRYFASIYYVP--------------KKVAEERIRNLLHM 133
L A+E RY + + YVP + V + +LH
Sbjct: 323 ---------------LPAHE--RYKSGLAYVPDSRRVGLVLDMNVVENVVLTNLSRVLHK 365
Query: 134 VGL-WDRKDDL------------------VMNYSRGMKQRLAIAKALINDPEVLFLDEPT 174
+ WD+ +++ + + S G +Q++ + + +I +P+V+ + EPT
Sbjct: 366 GRISWDKANEMTNEVVEKFEVLLSSTKAPIKHLSGGNQQKVMVGREIIREPKVIVVSEPT 425
Query: 175 LGLDVQSAIFVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRIIALDTPE 232
GLD+ + F+R+ + KL +E+K +LL + + E +L DR+A+I G+I+++ E
Sbjct: 426 QGLDIGATEFIRKTLLKL-RDERKGILLISTDLDEILQLSDRVAVIYEGKIMSIGKTE 482
>sp|P16676|CYSA_ECOLI SULFATE TRANSPORT ATP-BINDING PROTEIN CYSA >gi|7428825|pir||QRECSA
sulfate transport ATP-binding protein cysA - Escherichia
coli >gi|1788761|gb|AAC75475.1| (AE000329) ATP-binding
component of sulfate permease A protein; chromate
resistance [Escherichia coli K12]
>gi|1799841|dbj|BAA16296.1| (D90871) sulfate/thiosulfate
transport protein cysA [Escherichia coli]
>gi|1799851|dbj|BAA16305.1| (D90872) sulfate/thiosulfate
transport protein cysA [Escherichia coli]
Length = 365
Score = 114 bits (282), Expect = 2e-24
Identities = 72/237 (30%), Positives = 126/237 (52%), Gaps = 23/237 (9%)
Query: 3 AIEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKILTT 62
+IE+ N++K + + + L I+ ++ G++ LLGP+G+GKTT ++I+
Sbjct: 2 SIEIANIKKSFGRT-----------QVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAG 50
Query: 63 LLEPTSGEARVLGFDIVK-EAREIRKRINLVAEGERTLYWRLTAYENLRYFASIYYVPKK 121
L TSG R G D+ + AR+ +++ V + L+ +T ++N+ + ++ +P++
Sbjct: 51 LEHQTSGHIRFHGTDVSRLHARD--RKVGFVFQ-HYALFRHMTVFDNIAFGLTV--LPRR 105
Query: 122 ------VAEERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTL 175
+ ++ LL MV L D S G KQR+A+A+AL +P++L LDEP
Sbjct: 106 ERPNAAAIKAKVTKLLEMVQLAHLADRYPAQLSGGQKQRVALARALAVEPQILLLDEPFG 165
Query: 176 GLDVQSAIFVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRIIALDTPE 232
LD Q +R +++L EE K T + TH EA E+ DR+ ++ G I D P+
Sbjct: 166 ALDAQVRKELRRWLRQLHEELKFTSVFVTHDQEEATEVADRVVVMSQGNIEQADAPD 222
>pir||C72336 ABC transporter, ATP-binding protein - Thermotoga maritima (strain
MSB8) >gi|4981293|gb|AAD35847.1|AE001746_8 (AE001746)
ABC transporter, ATP-binding protein [Thermotoga
maritima]
Length = 265
Score = 112 bits (278), Expect = 5e-24
Identities = 97/309 (31%), Positives = 145/309 (46%), Gaps = 56/309 (18%)
Query: 1 MKAIEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKIL 60
M + VK+L+K Y +K A+ GI+F V+KGE+F +LGPNGAGKTTT+K +
Sbjct: 1 MMILRVKDLKKFYGEKA-----------AVDGISFEVEKGEIFAILGPNGAGKTTTLKCI 49
Query: 61 TTLLEPTSGEARVLG-FDIVKEAREIRKRINLVAEGERTLYWRLTAYENLRYFASIYYVP 119
T L + SGE + G F + E E+ LY L E + F I
Sbjct: 50 TGLRKKDSGEIELNGTFTYLPE--------------EKKLYPYLRVKEIIDLFKKI---G 92
Query: 120 KKVAEERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDV 179
K E+ LL + ++ V N S GM+ L ++ L + ++ LDEPT GLD
Sbjct: 93 KNFNEKNCLELLERFRI--DLNEKVTNLSHGMRTILYLSLVLSENVDLYILDEPTWGLDP 150
Query: 180 QSAIFVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRIIALDTPEGLKKLVR 239
+ + I+ L E K+VL T+H + E E++ DR+AI+ G+II + +K
Sbjct: 151 IVRNEILDRIRSLT-FEGKSVLYTSHVLAEVEKIADRVAIMKEGKIILTGNLDDIKSSYG 209
Query: 240 KDTIVEVRVKNYNGENPFGLAKIKEEGEKVVLRGPLDEEDIPKLVEFLVKNNAKVLSVEV 299
+ V +N NG L K + GEKV +LVK V++
Sbjct: 210 ----LVVSRENLNGY----LLKTLKSGEKV----------------YLVKKEEAPEGVKI 245
Query: 300 KEPTLEDVF 308
++ ED+F
Sbjct: 246 EDAAFEDIF 254
>sp|P37774|YECC_ECOLI HYPOTHETICAL AMINO-ACID ABC TRANSPORTER ATP-BINDING PROTEIN YECC
>gi|7442520|pir||B64955 ABC-type transport protein yecC
- Escherichia coli >gi|1736576|dbj|BAA15737.1| (D90832)
ORF_ID:o341#14; similar to [SwissProt Accession Number
P37774] [Escherichia coli] >gi|1788225|gb|AAC74984.1|
(AE000284) putative ATP-binding component of a transport
system [Escherichia coli K12]
Length = 250
Score = 111 bits (276), Expect = 8e-24
Identities = 81/236 (34%), Positives = 120/236 (50%), Gaps = 23/236 (9%)
Query: 1 MKAIEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKIL 60
M AIEVKNL K K L GI VK GE+ ++GP+G+GKTT ++ +
Sbjct: 1 MSAIEVKNLVK-----------KFHGQTVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRSI 49
Query: 61 TTLLEPTSGEARVLGFDIVKEAREIRKRINLVAEGER---------TLYWRLTAYENLRY 111
L +P +G V G + AR + ++ +L+ + + L+ T EN+
Sbjct: 50 NLLEQPEAGTITV-GDITIDTARSLSQQKSLIRQLRQHVGFVFQNFNLFPHRTVLENIIE 108
Query: 112 FASIYY-VPKKVAEERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFL 170
I PK+ A R R LL VGL ++ S G +QR+AIA+AL PEV+
Sbjct: 109 GPVIVKGEPKEEATARARELLAKVGLAGKETSYPRRLSGGQQQRVAIARALAMRPEVILF 168
Query: 171 DEPTLGLDVQSAIFVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRII 226
DEPT LD + V I++L +EK+T+++ TH M A ++ DR +D GRI+
Sbjct: 169 DEPTSALDPELVGEVLNTIRQLA-QEKRTMVIVTHEMSFARDVADRAIFMDQGRIV 223
>gb|AAK42960.1| ABC transporter, ATP binding protein (glucose) [Sulfolobus
solfataricus]
Length = 353
Score = 111 bits (274), Expect = 1e-23
Identities = 80/273 (29%), Positives = 139/273 (50%), Gaps = 25/273 (9%)
Query: 1 MKAIEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKIL 60
M I VKN+ K++ K + AL + N++ GE FG+LGP+GAGKTT ++I+
Sbjct: 1 MVRIIVKNVSKVFKKGKVV---------ALDNVNINIENGERFGILGPSGAGKTTFMRII 51
Query: 61 TTLLEPTSGEARVLGFD---IVKEAREI----RKRINLVAEGERTLYWRLTAYENLRYFA 113
L P++GE L FD + + I ++I +V + LY LTA+EN+ +
Sbjct: 52 AGLDVPSTGE---LYFDDRLVASNGKLIVPPEDRKIGMVFQ-TWALYPNLTAFENIAFPL 107
Query: 114 SIYYVPKKVAEERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEP 173
+ + K+ +R+ + ++ + + S G +QR+A+A+AL+ DP +L LDEP
Sbjct: 108 TNMKMSKEEIRKRVEEVAKILDIHHVLNHFPRELSGGQQQRVALARALVKDPSLLLLDEP 167
Query: 174 TLGLDVQSAIFVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRIIALDTPEG 233
LD + R L+K++ T+L+ +H + + DR+ ++ G+++ + PE
Sbjct: 168 FSNLDARMRDSARALVKEVQSRLGVTLLVVSHDPADIFAIADRVGVLVKGKLVQVGKPED 227
Query: 234 LKKLVRKDTIVEVRVKNYNGENPFGLAKIKEEG 266
L D V ++V + GE K+ EG
Sbjct: 228 L-----YDNPVSIQVASLIGEINELEGKVTNEG 255
>pir||H72272 sugar ABC transporter, ATP-binding protein - Thermotoga maritima
(strain MSB8) >gi|4981834|gb|AAD36351.1|AE001783_2
(AE001783) sugar ABC transporter, ATP-binding protein
[Thermotoga maritima]
Length = 369
Score = 111 bits (274), Expect = 1e-23
Identities = 67/231 (29%), Positives = 117/231 (50%), Gaps = 12/231 (5%)
Query: 1 MKAIEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKIL 60
M + ++N+ K+Y K+ A+K V+ E LLGP+G GKTTT++++
Sbjct: 3 MAQVVLENVTKVYENKVV----------AVKNANLVVEDKEFVVLLGPSGCGKTTTLRMI 52
Query: 61 TTLLEPTSGEARVLGFDIVKEAREIRKRINLVAEGERTLYWRLTAYENLRYFASIYYVPK 120
L E T G+ + G +V + + I +V + LY +T YEN+ + + PK
Sbjct: 53 AGLEEITDGKIYIDG-KVVNDVEPKDRDIAMVFQNY-ALYPHMTVYENMAFGLKLRKYPK 110
Query: 121 KVAEERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQ 180
+ R+R ++G+ + D S G +QR+A+ +A++ +P+V DEP LD +
Sbjct: 111 DEIDRRVREAAKILGIENLLDRKPRQLSGGQRQRVAVGRAIVRNPKVFLFDEPLSNLDAK 170
Query: 181 SAIFVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRIIALDTP 231
+ +R +KKL + T++ TH EA + D+I ++ G I + TP
Sbjct: 171 LRVQMRSELKKLHHRLQATIIYVTHDQVEAMTMADKIVVMKDGEIQQIGTP 221
>dbj|BAB04005.1| (AP001508) ABC transporter (ATP-binding protein) [Bacillus
halodurans]
Length = 259
Score = 110 bits (273), Expect = 2e-23
Identities = 74/229 (32%), Positives = 120/229 (52%), Gaps = 14/229 (6%)
Query: 2 KAIEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKILT 61
K +EV++L+K Y KK L +ALKG+ F++ GE G++GP+G+GKTT + +
Sbjct: 6 KLLEVQDLQKNYGKKNNLT-------KALKGVNFDILPGEFLGIMGPSGSGKTTLLNCIA 58
Query: 62 TLLEPTSGEARVLG-----FDIVKEAREIRKRINLVAEGERTLYWRLTAYENLRYFASIY 116
T+++PTSG + G FD A+ RI + + + L LT EN+ +I+
Sbjct: 59 TIIKPTSGRVLLHGKNISAFDSKDLAKYRGSRIGYLFQ-DFELLDNLTGQENILLPLAIH 117
Query: 117 YVPKKVAEERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLG 176
V A ++ L ++ + D S G KQR+A A+ LI+DP+++ DEPT
Sbjct: 118 GVDFTKARVKLDELASILDIADILHKFPSQMSGGQKQRVAAARCLISDPDIVLADEPTGA 177
Query: 177 LDVQSAIFVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRI 225
LD +SA + ++ + +T+L+ +H + A C RI I G I
Sbjct: 178 LDTRSARTLMTKLESINRSSGRTILMVSHDPN-AASFCSRILFIQDGVI 225
>pir||H72342 ABC transporter, ATP-binding protein - Thermotoga maritima (strain
MSB8) >gi|4981229|gb|AAD35787.1|AE001742_2 (AE001742)
ABC transporter, ATP-binding protein [Thermotoga
maritima]
Length = 228
Score = 109 bits (271), Expect = 3e-23
Identities = 82/230 (35%), Positives = 121/230 (51%), Gaps = 16/230 (6%)
Query: 1 MKA-IEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKI 59
MKA IEV NL K Y K E ALKGI + GE +LGP+G+GKTT +
Sbjct: 1 MKALIEVHNLWKEYNGK--------EKVTALKGINLRINTGEFVVILGPSGSGKTTLLNC 52
Query: 60 LTTLLEPTSGEARVLGFDIVKEAREIRKRINLVAEGERTLYWRL----TAYENLRYFASI 115
L+ + PT G + G D+ + E R R G ++ L TA EN+ I
Sbjct: 53 LSGVDRPTRGTVIIHGTDLYTLSEEERTRFRAENMGFVFQFFNLVPVLTAIENVELPLLI 112
Query: 116 YYVPKKVAEERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTL 175
V +K A ER +L VGL + D S G KQR+AIA+A++++P+V++ DEPT
Sbjct: 113 LGVNRKEARERAFEILRKVGLAHKCDRFPEELSGGEKQRVAIARAIVHNPKVIWADEPTG 172
Query: 176 GLDVQSAIFVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRI 225
LD ++ + +L+ ++ +E T+++ TH AE+ DR+ I G+I
Sbjct: 173 ALDNETGRMIIDLLMEM--KENSTLVVVTHDERIAEK-ADRVIRIRDGQI 219
>pir||H72301 ABC transporter, ATP-binding protein - Thermotoga maritima (strain
MSB8) >gi|4981596|gb|AAD36131.1|AE001765_10 (AE001765)
ABC transporter, ATP-binding protein [Thermotoga
maritima]
Length = 236
Score = 109 bits (269), Expect = 5e-23
Identities = 73/249 (29%), Positives = 128/249 (51%), Gaps = 20/249 (8%)
Query: 1 MKAIEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKIL 60
M + +NL+K + ++ + G+ +GE+ GLLGPNGAGKTT ++
Sbjct: 1 MDVLRCENLKKRFGRRY-----------VVNGVNLEFHRGEIVGLLGPNGAGKTTIFNMI 49
Query: 61 TTLLEPTSGEARVLGFDIVKEAREIRKRINLV-AEGERTLYWRLTAYENLRYFASIYYVP 119
++ PTSG+ DI K R R+ + + E +++ LT EN+ +
Sbjct: 50 LGVVVPTSGKIIFRDVDITKFPVYRRARLGITYLQQETSIFGGLTVRENIDLVLRFHEKD 109
Query: 120 KKVAEERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDV 179
K+ E +I LLH L ++ S G K++L +A+ + +P + LDEP G+D
Sbjct: 110 KEKRERKIEELLHEFHLKHLENQPASFLSGGEKRKLELARMMCLNPAFILLDEPFSGIDP 169
Query: 180 QSAIFVRELIKKLVEEEKKT--VLLTTHYMHEAEELCDRIAIIDHGRIIALDTPEGLKKL 237
++ V+E+ K +E ++K +++T H + E E+ DRI +I G I+A +PE ++
Sbjct: 170 KT---VKEIQKMTLELKQKNFGIVITDHNVDELVEIADRIYVIYKGEILAEGSPE---RI 223
Query: 238 VRKDTIVEV 246
+ +T+ EV
Sbjct: 224 LEDETVREV 232
>gb|AAF56807.1| (AE003766) CG9990 gene product [Drosophila melanogaster]
Length = 808
Score = 109 bits (269), Expect = 5e-23
Identities = 77/248 (31%), Positives = 129/248 (51%), Gaps = 11/248 (4%)
Query: 3 AIEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKILTT 62
A+ V++ K Y KK + L + V KG ++GLLG +G GKTT + +
Sbjct: 73 AVSVRHAFKAYGKKKNAN-------QVLNNLNMTVPKGTIYGLLGASGCGKTTLLSCIVG 125
Query: 63 LLEPTSGEARVLGFDIVKEAREIR-KRINLVAEGERTLYWRLTAYENLRYFASIYYVPKK 121
+GE VLG + KR+ + + E LY + E + YF I+ + K
Sbjct: 126 RRYMDAGEIFVLGGKPGTRGSGVPGKRVGYMPQ-EIALYGEFSIQETMMYFGWIFGMDTK 184
Query: 122 VAEERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQS 181
ER++ LL+ + L K LV N S G ++R++ A AL++DPE+L LDEPT+G+D
Sbjct: 185 EILERLQFLLNFLDLPSEKR-LVKNLSGGQQRRVSFAVALMHDPELLILDEPTVGVDPLL 243
Query: 182 AIFVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRIIALDTPEGLKKLVRKD 241
+ + + + +KTV++TTHY+ EA + I ++ G ++A ++P L + +
Sbjct: 244 RQSIWNHLVHITKAGQKTVIITTHYIEEARQ-AHTIGLMRSGHLLAEESPSVLLSIYKCI 302
Query: 242 TIVEVRVK 249
++ EV +K
Sbjct: 303 SLEEVFLK 310
>pir||S34187 probable ABC-type transport protein TnrB2 - Streptomyces
longisporoflavus >gi|581708|emb|CAA52012.1| (X73633)
start codon gtg [Streptomyces longisporoflavus]
Length = 300
Score = 108 bits (268), Expect = 7e-23
Identities = 87/287 (30%), Positives = 139/287 (48%), Gaps = 15/287 (5%)
Query: 29 ALKGITFNVKKGELFGLLGPNGAGKTTTIKILTTLLEPTSGEARVLGFDIVKEAREIRKR 88
AL G+ V GE+ G LGPNGAGK+TTI++L LL SG K+A + +R
Sbjct: 13 ALDGLDLAVDSGEVHGFLGPNGAGKSTTIRVLLGLLRADSGAPSSSARTPWKDAVALHRR 72
Query: 89 INLVAEGERTLYWRLTAYENLRYFASIYYVPKKVAEERIRNLLHMVGLWDRKDDLVMNYS 148
+ V G+ L+ LT E + + + + +R L+ L K YS
Sbjct: 73 LAYV-PGDVELWPNLTGGEAIDLLSRL---RGGLDRQRRDELIERFDLDPTKKGRA--YS 126
Query: 149 RGMKQRLAIAKALINDPEVLFLDEPTLGLDVQSAIFVRELIKKLVEEEKKTVLLTTHYMH 208
+G +Q++ I AL +D E+L LDEPT GLD + +++I + + KTVLL++H +
Sbjct: 127 KGNRQKVPIVAALASDAELLLLDEPTAGLDPLMEVVFQDVILR-AKAAGKTVLLSSHILA 185
Query: 209 EAEELCDRIAIIDHGRIIALDTPEGLKKLVRKDTIVEVR--VKNYNGENPFGLAKIKEEG 266
+ E+LCDR++II GR + T ++ L R E V + ++ E
Sbjct: 186 QVEKLCDRVSIIRKGRNVQSGTLTEMRHLTRTTVEAETERAVTGLDAMAGVHAVRVTERR 245
Query: 267 EKVVLRGPLDEEDIPKLVEFLVKNNAKVLSVEVKEPTLEDVFIKLTG 313
+ G + I +L EF ++ S+ PTLE++ ++ G
Sbjct: 246 VHFAVDGAHLDAAIHRLGEFGIR------SLTSHPPTLEELMLRHYG 286
>pir||G71271 probable ABC transporter natA - syphilis spirochete
>gi|3323192|gb|AAC65843.1| (AE001257) ABC transporter,
ATP-binding protein (natA) [Treponema pallidum]
Length = 268
Score = 108 bits (268), Expect = 7e-23
Identities = 68/227 (29%), Positives = 124/227 (53%), Gaps = 14/227 (6%)
Query: 1 MKAIEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKIL 60
M+ + V +L K Y + P R E +TF V++G++ G+LG NGAGK+T ++++
Sbjct: 1 MEVLRVTSLTKHYGSRRH-PVRGCE------DVTFCVERGQVCGILGLNGAGKSTVLRVI 53
Query: 61 TTLLEPTSGEARVLGFDIVKEAREIRKRINLVAEGERTLYWRLTAYENLRYFASIYYVPK 120
L+ P+SGE + + R+ I ++ E + LY +T +++ + A I+ +
Sbjct: 54 GGLIHPSSGEVYACHCSLSRYPVGYRRHIGVLHE-QNPLYADMTVEQHILFVARIFQLAD 112
Query: 121 KVAEERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQ 180
E R ++ + L V N S+G KQR+ +A+AL++ P++L LDEP GLD+
Sbjct: 113 --GEARTAEMIELFQLQSVAHRRVRNLSKGYKQRVGLAQALVHRPKLLVLDEPLSGLDI- 169
Query: 181 SAIFVRELIKKLVEEEKK-TVLLTTHYMHEAEELCDRIAIIDHGRII 226
++++E K++V + V+ +TH + E E LCD ++ G ++
Sbjct: 170 --VYLKEFHKEIVAQNNNLAVVFSTHAVQEIEALCDVFVLLHAGHVL 214
>pir||F71654 ABC transporter ATP-binding protein (abcT2) RP508 - Rickettsia
prowazekii >gi|3861060|emb|CAA14960.1| (AJ235272) ABC
TRANSPORTER ATP-BINDING PROTEIN (abcT2) [Rickettsia
prowazekii]
Length = 254
Score = 108 bits (268), Expect = 7e-23
Identities = 66/227 (29%), Positives = 120/227 (52%), Gaps = 13/227 (5%)
Query: 1 MKAIEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKIL 60
M ++++KN+ K Y K+ L I+ ++K+GE+ GL GPNGAGKTT I+
Sbjct: 15 MDSLQIKNISKSYKKR-----------NILTDISLHIKQGEIVGLFGPNGAGKTTCFNII 63
Query: 61 TTLLEPTSGEARVLGFDIVKEAREIRKRINL-VAEGERTLYWRLTAYENLRYFASIYYVP 119
L+ P SG+ + +I +R R+ + E +++ L+ +N++ I
Sbjct: 64 IGLMRPDSGQLLLNDINITNLPIYLRARLGIGYLLQEPSIFRGLSVADNIKAVVEISEND 123
Query: 120 KKVAEERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDV 179
K+V E++ NLL + KD + S G ++RL IA++ + +P+ + LDEP G+D
Sbjct: 124 KEVIEQKTHNLLEKFSIVHLKDLSSASLSGGERRRLEIARSFVIEPKFIMLDEPLAGIDP 183
Query: 180 QSAIFVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRII 226
+ +++LI L E +L+T H + + ++ DR +I G+++
Sbjct: 184 LAISDIKKLITYL-REFNIGILITDHNVRDTLDIVDRAYVIFEGKVL 229
>gi|11499064 ABC transporter, ATP-binding protein [Archaeoglobus fulgidus]
>gi|7445944|pir||D69433 ABC transporter, ATP-binding
protein homolog - Archaeoglobus fulgidus
>gi|2649101|gb|AAB89781.1| (AE001001) ABC transporter,
ATP-binding protein [Archaeoglobus fulgidus]
Length = 226
Score = 108 bits (267), Expect = 9e-23
Identities = 75/232 (32%), Positives = 120/232 (51%), Gaps = 16/232 (6%)
Query: 1 MKAIEVKNLRKLYPKKIPLPFRKIEWFE--ALKGITFNVKKGELFGLLGPNGAGKTTTIK 58
MK IE+ ++ K+Y + ++E AL G++ V+ GE ++GP+G+GK+T +
Sbjct: 1 MKVIELVDVYKIY---------RTAYYEVHALDGVSMEVEAGEFVAIMGPSGSGKSTLLN 51
Query: 59 ILTTLLEPTSGEARVLGFDIV----KEAREIRKRINLVAEGERTLYWRLTAYENLRYFAS 114
++ L +PT GE + G +E ++R+ + L LTA EN+
Sbjct: 52 MIGCLDKPTKGEVIINGVKTSGLSDRELTKLRRDSIGFIFQQYNLIPTLTALENVELPMI 111
Query: 115 IYYVPKKVAEERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPT 174
V + E R + LL +VG+ + D S G +QR+AIA+AL N+P++L DEPT
Sbjct: 112 FRGVARAERERRAKELLKVVGIEELADRRPREMSGGQQQRVAIARALANNPKILLCDEPT 171
Query: 175 LGLDVQSAIFVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRII 226
LD +S V ++K L EE TV+L TH E DR+ I G+++
Sbjct: 172 GNLDTKSGRQVMGILKNLNEENGVTVVLVTH-DPSLSEYADRVIRIRDGKVV 222
>gb|AAD09159.1| (AF047429) putative ATP/GTP binding protein NosF [Achromobacter
cycloclastes] >gi|4127274|emb|CAA75427.1| (Y15161)
cytoplasmic protein [Achromobacter cycloclastes]
Length = 299
Score = 108 bits (267), Expect = 9e-23
Identities = 95/296 (32%), Positives = 142/296 (47%), Gaps = 14/296 (4%)
Query: 22 RKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKILTTLLEPTSGEARVLGFDIVKE 81
++ + EALK ++ ++ G LLG NGAGK+T +KI+ L+ SGE V G
Sbjct: 12 KRFQSVEALKSVSLALEPGRRAALLGHNGAGKSTMMKIVLGLIPFDSGEVSVCGSAPGSP 71
Query: 82 AREIRKRINLVAEGERTLYWRLTAYENLRYFASIYYVPKKVAEERIRNLLHMVGLWDRKD 141
A R ++ + E + LT E LR++ ++ K A E LL VGL
Sbjct: 72 AA--RTQVAYLPENV-AFHPALTGEEQLRHYLALRGENPKQATE----LLARVGLGHAAR 124
Query: 142 DLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQSAIFVRELIKKLVEEEKKTVL 201
+ YS+GM+QR+ +A+ LI P +L LDEPT GLD S +L+ L E +L
Sbjct: 125 RRIGTYSKGMRQRVGLAQTLIGRPRLLVLDEPTSGLDPVSRRDFYDLLDGLA-AEGTAIL 183
Query: 202 LTTHYMHEAEELCDRIAIIDHGRIIALDTPEGLKKLVRKDTIVEVRVKNYNGENPFGLAK 261
L++H + E E D I I+ G ++A T L+ R V V+ G P A
Sbjct: 184 LSSHVLTEVEARTDSILILSGGELVAEGTLADLR--TRAALPVAFSVRPAPGHAPALAAT 241
Query: 262 IKE--EGEKVVLR-GPLDEEDIPKLVEFLVKNNAKVLSVEVKEPTLEDVFIKLTGR 314
E EGE +LR E +P L +A + ++V P+LED++ + R
Sbjct: 242 FPEGVEGEDGLLRLRGSQSEKLPLLARIAALGSA-IADLDVIPPSLEDIYSHFSRR 296
>pir||B72300 oligopeptide ABC transporter, ATP-binding protein - Thermotoga
maritima (strain MSB8)
>gi|4981604|gb|AAD36138.1|AE001766_4 (AE001766)
oligopeptide ABC transporter, ATP-binding protein
[Thermotoga maritima]
Length = 341
Score = 108 bits (266), Expect = 1e-22
Identities = 83/254 (32%), Positives = 137/254 (53%), Gaps = 25/254 (9%)
Query: 1 MKAIEVKNLRKLYPKKIPLPFRK--IEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIK 58
M +EVKNL+K +P I FR+ + + +A+ GI+F++++GE GL+G +G GKTTT K
Sbjct: 1 MALLEVKNLKKYFPI-IKRGFRRKVVGYLKAVDGISFHIEEGETLGLVGESGCGKTTTAK 59
Query: 59 ILTTLLEPTSGEARVLGFD---------IVKEARE--IRKRINLVAEGE-RTLYWRLTAY 106
++ +EPT GE VL D KE RE +R+ + ++ + +L R+T
Sbjct: 60 LIMRGIEPTEGEI-VLNMDGEKVDITKLSEKELREKGVRRFLQMIFQDPYSSLNPRMTVR 118
Query: 107 ENLRYFASIYYV--PKKVAEERIRNLLHMVGLWDRKDDLVMNY----SRGMKQRLAIAKA 160
+ + + V K+ + + +LL VGL + + + Y S G +QR+AIA+A
Sbjct: 119 DIIAEPLVVNGVIKGKEEIDAIVSDLLRAVGL---RPEYMQRYPHAFSGGQRQRIAIARA 175
Query: 161 LINDPEVLFLDEPTLGLDVQSAIFVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAII 220
+ P+++ DEPT LDV + L+K L +E T L +H + E + +R+A++
Sbjct: 176 IALKPKLVLCDEPTSALDVSVQAQIINLLKDLQKEYNLTYLFISHDLGVVEHITNRVAVM 235
Query: 221 DHGRIIALDTPEGL 234
GRI+ L E L
Sbjct: 236 YVGRIVELAETEEL 249
>pir||E72428 oligopeptide ABC transporter, ATP-binding protein - Thermotoga
maritima (strain MSB8)
>gi|4980511|gb|AAD35121.1|AE001690_15 (AE001690)
oligopeptide ABC transporter, ATP-binding protein
[Thermotoga maritima]
Length = 268
Score = 107 bits (265), Expect = 2e-22
Identities = 83/252 (32%), Positives = 129/252 (50%), Gaps = 32/252 (12%)
Query: 1 MKAIEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKIL 60
M + VKNL K++ L F EA+K ++F VK+ E+ L+G +G+GKTTT K++
Sbjct: 1 MSRLVVKNLTKIFS----LGFFSKRRIEAVKNVSFEVKEKEIVSLVGESGSGKTTTAKMI 56
Query: 61 TTLLEPTSGEARVLGFDIVKEAR------EIRKRINLVAEG-----------ERTLYWRL 103
LL PTSGE G DI K+ + E R++++ V + ERTL+ +
Sbjct: 57 LRLLPPTSGEIYFEGKDIWKDIKDRESLVEFRRKVHAVFQDPFASYNPFYPVERTLWQAI 116
Query: 104 TAYENLRYFASIYYVPKKVAEERIRNLLHMVGLWDRKDDL---VMNYSRGMKQRLAIAKA 160
+ EN KK A E I+ L VG+ D KD L S G KQR+ IA+
Sbjct: 117 SLLENKP-------SNKKEALELIKESLFRVGI-DPKDVLGKYPHQISGGQKQRIMIARC 168
Query: 161 LINDPEVLFLDEPTLGLDVQSAIFVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAII 220
I P ++ DEPT +D S + +L+++L EE+ +++ TH + A + D I ++
Sbjct: 169 WILRPLLIVADEPTSMIDASSRGGIIKLLEELREEQGTSIIFITHDLGLAYYVSDNIFVM 228
Query: 221 DHGRIIALDTPE 232
+G I+ P+
Sbjct: 229 KNGEIVERGHPD 240
>sp|P55604|Y4OS_RHISN PROBABLE ABC TRANSPORTER ATP-BINDING PROTEIN Y4OS
>gi|2182563|gb|AAB91805.1| (AE000089) Y4oS [Rhizobium
sp. NGR234]
Length = 371
Score = 106 bits (263), Expect = 3e-22
Identities = 64/231 (27%), Positives = 117/231 (49%), Gaps = 13/231 (5%)
Query: 1 MKAIEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKIL 60
M + ++N+ K Y +P ++F ++ GE L+GP+G GK+T +++L
Sbjct: 17 MTDVTIRNVTKRYGALTVIP-----------QLSFRIEDGEFVVLVGPSGCGKSTLLRML 65
Query: 61 TTLLEPTSGEARVLGFDIVKEAREIRKRINLVAEGERTLYWRLTAYENLRYFASIYYVPK 120
L E + G+ ++G D++ + R ++R + LY +T EN+ + + P+
Sbjct: 66 AGLEEISGGDL-LMGADVIND-RPAKERDMAIVFQNYALYPHMTVAENMGFALKLRKRPR 123
Query: 121 KVAEERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQ 180
+ER+ ++GL D S G +QR+A+ +A++ DP+V DEP LD +
Sbjct: 124 AEIDERVDKAAAILGLGKLLDRYPRALSGGQRQRVAMGRAIVRDPQVFLFDEPLSNLDAK 183
Query: 181 SAIFVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRIIALDTP 231
+ +R IK L + K T + TH EA + D+I +++ GR+ + TP
Sbjct: 184 LRVQMRAEIKALHQRLKITTVYVTHDQIEAMTMADKIVVMNEGRVEQMGTP 234
>pir||C72615 probable transport ATP-binding protein APE1380 - Aeropyrum pernix
(strain K1) >gi|5105063|dbj|BAA80377.1| (AP000061) 316aa
long hypothetical transport ATP-binding protein
[Aeropyrum pernix]
Length = 316
Score = 106 bits (262), Expect = 4e-22
Identities = 87/298 (29%), Positives = 143/298 (47%), Gaps = 21/298 (7%)
Query: 29 ALKGITFNVKKGELFGLLGPNGAGKTTTIKILTTLLEPTSGEARVLGFDIVKEARE-IRK 87
A + + F G + G+LGPNGAGKTT +K + L++P++GE V G + E +
Sbjct: 23 AYRNVEFTFTSG-ILGVLGPNGAGKTTLLKTILGLVKPSAGEILVEGVNPRSPGFEKLLP 81
Query: 88 RINLVAEGERTLYWRLTAYENLRYFASIYYVPKKVAEERIRNLLHMVGLWDRKDDLVMNY 147
RI V E W T L A + A R R L +VGL + +
Sbjct: 82 RIGYVPELPVVPLWT-TPCILLETLARLEGYTSVEARVRAREALEVVGLAGECETPIGKL 140
Query: 148 SRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQSAIFVRELIKKLVEEEKKTVLLTTHYM 207
S+G ++R+ +A+A I + E+L LDEP GLD + VREL+ + V E TV++++H +
Sbjct: 141 SKGARKRVLVAQAFIGERELLVLDEPYSGLDPEWVYRVRELL-RTVAREGATVIVSSHIL 199
Query: 208 HEAEELCDRIAIID-----HGRIIAL-----DTPEGLKKLVRKDTIVEVRVKNYNGENPF 257
E E++ + ++ +G I L TP + + + VEV + F
Sbjct: 200 RELEDIATHVLVLKTDQLFYGSIEELRAWLSGTPRIILSVAEPERAVEVLRR-----GGF 254
Query: 258 GLAKIKEEGEKVVLRGPLDEEDIPKLVEFLVKNNAKVLSVEVKEPTLEDVFIKLTGRG 315
I + G+ VV D D +++ L+ N ++ V++ +LE+ ++KL G G
Sbjct: 255 NAYTINKGGQLVVAVEGAD--DPARVLSLLLAENIEISEYRVEKASLEEAYLKLVGAG 310
>pir||H82727 sugar ABC transporter ATP-binding protein XF1067 [imported] -
Xylella fastidiosa (strain 9a5c)
>gi|9106014|gb|AAF83877.1|AE003943_8 (AE003943) sugar
ABC transporter ATP-binding protein [Xylella fastidiosa]
Length = 364
Score = 106 bits (262), Expect = 4e-22
Identities = 71/232 (30%), Positives = 120/232 (51%), Gaps = 14/232 (6%)
Query: 1 MKAIEVKNLRKLYPK-KIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKI 59
M ++++ +RK+Y ++ +P G++F V GEL L+GP+G GK+T +++
Sbjct: 1 MAKVQLEAIRKVYDNGQVVVP-----------GVSFEVADGELMVLVGPSGCGKSTLLRM 49
Query: 60 LTTLLEPTSGEARVLGFDIVKEAREIRKRINLVAEGERTLYWRLTAYENLRYFASIYYVP 119
+ L + +SG R+ G +V + + + +V + LY +TA ENL + +
Sbjct: 50 IAGLEDISSGTLRI-GERVVNDVPPKDRNVAMVFQSY-ALYPHMTAAENLAFGLKLRGYS 107
Query: 120 KKVAEERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDV 179
+ ERI+N+ M+GL D L S G +QR+A+ +A++ + V LDEP LD
Sbjct: 108 TEAIAERIKNVAEMLGLTSLLDTLPKAMSGGQRQRVALGRAMVRESAVFLLDEPLSNLDA 167
Query: 180 QSAIFVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRIIALDTP 231
+ VR I +L + T++ TH EA L RI ++ G I +DTP
Sbjct: 168 KLRNSVRSDITRLHRKLGTTMIYVTHDQVEAMTLGHRIVLLKDGVIQQIDTP 219
>gi|11498623 ABC transporter, ATP-binding protein [Archaeoglobus fulgidus]
>gi|7445942|pir||B69377 ABC transporter, ATP-binding
protein homolog - Archaeoglobus fulgidus
>gi|2649576|gb|AAB90224.1| (AE001033) ABC transporter,
ATP-binding protein [Archaeoglobus fulgidus]
Length = 228
Score = 106 bits (261), Expect = 5e-22
Identities = 76/235 (32%), Positives = 124/235 (52%), Gaps = 16/235 (6%)
Query: 1 MKAIEVKNLRKLYPKKIPLPFRKIEWFE--ALKGITFNVKKGELFGLLGPNGAGKTTTIK 58
MK +E++N+ K+Y + E++E AL G++ +V++GE ++GP+G+GK+T +
Sbjct: 1 MKVVELRNVYKIY---------RTEYYEVRALDGVSMDVEEGEFVVIMGPSGSGKSTLLN 51
Query: 59 ILTTLLEPTSGEARVLGFDIVK----EAREIRKRINLVAEGERTLYWRLTAYENLRYFAS 114
++ L +PT GE + G + E+R+ L LTA EN+
Sbjct: 52 LIGCLDKPTEGEVLINGVETSSLNDNRLTELRRDTIGFIFQTYNLIPTLTALENVELPMI 111
Query: 115 IYYVPKKVAEERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPT 174
V ++ EER + LL VGL + S G +QR+AIA+AL N+P++L DEPT
Sbjct: 112 FKGVGRREREERAKELLKNVGLEKEMNRKPNEMSGGQQQRVAIARALANNPKILLCDEPT 171
Query: 175 LGLDVQSAIFVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRIIALD 229
LD +S V E+I+ E TV+L TH A + DR+ + G+I +++
Sbjct: 172 GNLDTKSGEQVMEIIRHQNEVLGVTVILVTHDPSLA-KYGDRVIRLRDGKIESVE 225
>pir||A70001 ABC transporter (ATP-binding protein) homolog ytsC - Bacillus
subtilis >gi|2293177|gb|AAC00255.1| (AF008220)
transporter [Bacillus subtilis]
>gi|2635522|emb|CAB15016.1| (Z99119) similar to ABC
transporter (ATP-binding protein) [Bacillus subtilis]
Length = 253
Score = 105 bits (260), Expect = 6e-22
Identities = 67/229 (29%), Positives = 115/229 (49%), Gaps = 12/229 (5%)
Query: 1 MKAIEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKIL 60
M +E +RK Y K+ E LKGI +++KGE ++G +G+GKTT + +L
Sbjct: 1 MVILEANKIRKSYGNKLNKQ-------EVLKGIDIHIEKGEFVSIMGASGSGKTTLLNVL 53
Query: 61 TTLLEPTSGEARVLGFDIV----KEAREIRKRINLVAEGERTLYWRLTAYENLRYFASIY 116
+++ + + G + G D+ K+ E RK+ + L LT EN+ SI
Sbjct: 54 SSIDQVSHGTIHINGNDMTAMKEKQLAEFRKQHLGFIFQDYNLLDTLTVKENILLPLSIT 113
Query: 117 YVPKKVAEERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLG 176
+ KK A + + +G+++ +D S G KQR + +A I+DP ++F DEPT
Sbjct: 114 KLSKKEANRKFEEVAKELGIYELRDKYPNEISGGQKQRTSAGRAFIHDPSIIFADEPTGA 173
Query: 177 LDVQSAIFVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRI 225
LD +SA + + +L ++ T+++ TH A C R+ I G++
Sbjct: 174 LDSKSASDLLNKLSQLNQKRNATIIMVTH-DPVAASYCGRVIFIKDGQM 221
>pir||A70482 ABC transporter - Aquifex aeolicus >gi|2984331|gb|AAC07852.1|
(AE000774) ABC transporter [Aquifex aeolicus]
Length = 305
Score = 105 bits (260), Expect = 6e-22
Identities = 73/238 (30%), Positives = 129/238 (53%), Gaps = 7/238 (2%)
Query: 1 MKAIEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKIL 60
M+ + ++NL K+Y K+P F + + F ALK ++ ++K+G+ ++G +G+GK+T KI+
Sbjct: 1 MELLSIQNLTKVY--KVPAGFLRKKNFFALKEVSLSIKQGDFLAIVGESGSGKSTLGKII 58
Query: 61 TTLLEPTSGEARVLGFDIVKEAREIRKRINLVAEGER-TLYWRLTAYENLRYFASIYYVP 119
L +PT G+ G DI +E ++++ V + R +L R+ E L ++ V
Sbjct: 59 LRLEKPTKGKVSFKGKDIFSMGKEYTRKVSAVFQDPRSSLNPRMKVEEILEEPLIVHRV- 117
Query: 120 KKVAEERIRNLLHMVGLWDR-KDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLD 178
K +ER+ +L V L + + + S G QR+AIA+ALI +PE++ DEPT LD
Sbjct: 118 -KGRKERVLKVLQRVRLSEELLEKRPLQISGGQAQRVAIARALILEPELIVADEPTASLD 176
Query: 179 VQSAIFVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRIIALDTPEGLKK 236
V + EL K+L + + TH + E++ + + +I G ++ L E + K
Sbjct: 177 VSVQEEILELFKEL-NSKGISFFFVTHDIRVVEKVANMVGVIYAGILMELGKKEEVLK 233
>pir||B72424 oligopeptide ABC transporter, ATP-binding protein - Thermotoga
maritima (strain MSB8)
>gi|4980543|gb|AAD35151.1|AE001692_8 (AE001692)
oligopeptide ABC transporter, ATP-binding protein
[Thermotoga maritima]
Length = 338
Score = 105 bits (260), Expect = 6e-22
Identities = 76/247 (30%), Positives = 129/247 (51%), Gaps = 19/247 (7%)
Query: 1 MKAIEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKIL 60
MK +EVK L+K +P + + + A+ ++F++K+GE L+G +G GKTTT K +
Sbjct: 1 MKLLEVKGLKKYFPLTKGFFKKVVGYVRAVDDVSFDIKQGETLALVGESGCGKTTTAKSI 60
Query: 61 TTLLEPTSGEARVLGFD-----IVKEARE----IRKRINLVAEGERT-LYWRLTAYENLR 110
++PT G+ +L D I K +R+ R+ + ++ + T L R+ E +
Sbjct: 61 LRAIDPTDGDV-ILHLDGKDVNIAKLSRDELKPYRRYMQMIFQNPYTSLNPRMKVKEIVG 119
Query: 111 YFASIYYVPK-KVAEERIRNLLHMVGLWDRKDDLVMNY----SRGMKQRLAIAKALINDP 165
+ + K K E+R+ LL VGL + + ++ Y S G +QR+ IA+A+ P
Sbjct: 120 EPLLVNGIAKGKELEDRVAELLKAVGL---RPEYMIRYPHAFSGGQRQRIVIARAIALRP 176
Query: 166 EVLFLDEPTLGLDVQSAIFVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRI 225
+++ DEPT LDV + L+ L EE T L TH + E + DR+A++ G+I
Sbjct: 177 KLVVCDEPTSALDVSIRAQILNLLMDLQEEFALTYLFITHDLSVVEHISDRVAVMYLGKI 236
Query: 226 IALDTPE 232
+ L + E
Sbjct: 237 VELSSTE 243
>pir||C72421 oligopeptide ABC transporter, ATP-binding protein - Thermotoga
maritima (strain MSB8)
>gi|4980563|gb|AAD35169.1|AE001694_5 (AE001694)
oligopeptide ABC transporter, ATP-binding protein
[Thermotoga maritima]
Length = 320
Score = 105 bits (260), Expect = 6e-22
Identities = 81/245 (33%), Positives = 121/245 (49%), Gaps = 18/245 (7%)
Query: 1 MKAIEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKIL 60
M +E+KNL K++ I F + A+ + F++ + E+F L G +G GKTTT KI+
Sbjct: 1 MPLLEIKNLTKIFT--IGSIFSRTR-IVAVDNVNFDINEAEIFTLAGESGCGKTTTAKII 57
Query: 61 TTLLEPTSGEARVLGFDI------VKEAREIRKRINLVAEGERTLYWRLTAYENLRYFAS 114
EPTSGE G I KE RE+ K I V + + + L + RYF
Sbjct: 58 LGFEEPTSGEIIYKGRKIDRVHQNEKERRELLKEIQAVFQNPFSTFNPLRKVD--RYFYE 115
Query: 115 IYYV-----PKKVAEERIRNLLHMVGLW--DRKDDLVMNYSRGMKQRLAIAKALINDPEV 167
+ KK AEE I+ L VG+ + + +S G QR++IA+AL+ +P +
Sbjct: 116 TLFNLGIADTKKKAEEIIKEKLSAVGISFEEFSEKYPSEFSGGQLQRISIARALLTNPSL 175
Query: 168 LFLDEPTLGLDVQSAIFVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRIIA 227
L DEP +D + + L K L E+ +VL TH + A + DRIA++ G I+
Sbjct: 176 LVADEPVSMVDASLRMSIVNLFKDLKEQYGVSVLYITHDLTTAYYVSDRIAVMFRGNIVE 235
Query: 228 LDTPE 232
L E
Sbjct: 236 LGPAE 240
>pir||C72289 oligopeptide ABC transporter, ATP-binding protein - Thermotoga
maritima (strain MSB8)
>gi|4981699|gb|AAD36227.1|AE001772_6 (AE001772)
oligopeptide ABC transporter, ATP-binding protein
[Thermotoga maritima]
Length = 325
Score = 105 bits (259), Expect = 8e-22
Identities = 75/242 (30%), Positives = 132/242 (53%), Gaps = 15/242 (6%)
Query: 1 MKAIEVKNLRKLYPKK---IPLPFRKIEWF-EALKGITFNVKKGELFGLLGPNGAGKTTT 56
M IEV+NL+K +P K I + RK F +A+ G+ F + +G+ GL+G +G+GKTTT
Sbjct: 1 MALIEVQNLKKYFPVKQGPIDVLLRKPRKFVKAVDGVNFQIDEGKSLGLVGESGSGKTTT 60
Query: 57 IKILTTLLEPTSGEARVLGFDIVK----EAREIRKRINLVAEGER-TLYWRLTAYENLRY 111
+++ L EPT G+ G DI K E R++RK + ++ + +L + + + +
Sbjct: 61 GRVILRLEEPTDGKIIFDGRDITKLSKEEMRKLRKEMQIIFQDPMASLNPYMRVGKAIEH 120
Query: 112 FASIYYVPKKVA-EERIRNLLHMVGLWDRKDDLVMNYSR----GMKQRLAIAKALINDPE 166
I+ + + + +E + +L V L + +D+ Y R G +QR+ IA+ALI P
Sbjct: 121 ALEIHGIGDRSSRKEMVLEMLRRVNL-EPAEDIYRRYPRELSGGQRQRVVIARALILKPR 179
Query: 167 VLFLDEPTLGLDVQSAIFVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRII 226
++ DE LDV + L+++L +E T+L TH + + +CD IA++ G+I+
Sbjct: 180 LVVADEAVAMLDVSVRSQLLRLLQELRKEFNLTMLFITHDLATTKYVCDEIAVMYLGKIV 239
Query: 227 AL 228
+
Sbjct: 240 EI 241
>pir||A83621 probable ATP-binding component of ABC transporter PA0206 [imported]
- Pseudomonas aeruginosa (strain PAO1)
>gi|9946041|gb|AAG03595.1|AE004458_10 (AE004458)
probable ATP-binding component of ABC transporter
[Pseudomonas aeruginosa]
Length = 370
Score = 104 bits (258), Expect = 1e-21
Identities = 88/321 (27%), Positives = 151/321 (46%), Gaps = 26/321 (8%)
Query: 3 AIEVKNLRKLY--PKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKIL 60
A+ ++ +RK+Y P+ P+ ALK + +++ E F LLGP+G GKTT ++++
Sbjct: 11 AVSIRAVRKVYGDPESGPV---------ALKRVDLDIRDNEFFTLLGPSGCGKTTLLRMI 61
Query: 61 TTLLEPTSGEARVLGFDIVKEAREIRKRINLVAEGERTLYWRLTAYENLRYFASIYYVPK 120
PT GE + G +I + +N V + L+ ++ ENL + + +
Sbjct: 62 AGFEFPTEGEILLYGENIAARP-PFERPVNTVFQ-HYALFPHMSIAENLAFGLESRPLGR 119
Query: 121 KVAE----ERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLG 176
+ + ER+R +L +V + D S G +QR+A+A+AL P VL LDEP
Sbjct: 120 SLGKAEIAERVREMLALVQMERFADRRPGQLSGGQQQRVALARALAPQPRVLLLDEPLSA 179
Query: 177 LDVQSAIFVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRIIALDTPEGLKK 236
LD++ +RE +K + + T + TH EA + DRIA++ G++ + PE + +
Sbjct: 180 LDLKLRQAMREELKAIQAKTGITFIFVTHDQEEALTMSDRIAVLSEGQVQQVGPPEEIYE 239
Query: 237 LVRKDTIVEVRVKNYNGENPFGLAK-IKEEGEKVVLRGPLDEEDIPKLVEFLVKNNAKVL 295
+ + + GE F A+ ++ +G + RGP E + L L
Sbjct: 240 RPGNRFVAD-----FIGETNFIEAELLQRDGPLALYRGPGGEAFEAAARDGLAAGARVCL 294
Query: 296 SVEVKEPTLEDVFIKLTGRGL 316
S+ P D+ TG GL
Sbjct: 295 SI---RPERLDLLAANTGGGL 312
>gb|AAK41340.1| ABC transporter, ATP binding subunit [Sulfolobus solfataricus]
Length = 225
Score = 104 bits (257), Expect = 1e-21
Identities = 73/230 (31%), Positives = 113/230 (48%), Gaps = 13/230 (5%)
Query: 1 MKAIEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKIL 60
M I ++N+ K+Y + AL+ I ++ +GE +LGP+G+GK+T + IL
Sbjct: 1 MSVIRLENVTKIYEGNVKTI--------ALRDINLSIDEGEFISILGPSGSGKSTLLSIL 52
Query: 61 TTLLEPTSGEARVLGFDIVK----EAREIRKRINLVAEGERTLYWRLTAYENLRYFASIY 116
L P+ G+ + D+ K E +IR L RL+ +N+
Sbjct: 53 GILDRPSQGKVYIYEVDVTKLSDNEISKIRNEYIGFVFQNFNLIQRLSVLQNVELPLVAR 112
Query: 117 YVPKKVAEERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLG 176
+PKK EE N L +VGL + S G +QR+AIA+AL +P+++ DEPT
Sbjct: 113 GIPKKKREEIAINSLKLVGLDGLINKKPSELSGGQQQRVAIARALAQNPKIILADEPTGN 172
Query: 177 LDVQSAIFVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRII 226
LD +A V + KK+ EE K T+ + TH A +I I D G+I+
Sbjct: 173 LDSSNAKIVMNIFKKINEEFKTTIAVVTHDREVASYTKRKIYIRD-GKIV 221
>pir||G69192 ABC transporter (glutamine transport ATP-binding protein) -
Methanobacterium thermoautotrophicum (strain Delta H)
>gi|2621782|gb|AAB85201.1| (AE000849) ABC transporter
(glutamine transport ATP-binding protein)
[Methanobacterium thermoautotrophicum]
Length = 220
Score = 104 bits (257), Expect = 1e-21
Identities = 77/224 (34%), Positives = 113/224 (50%), Gaps = 15/224 (6%)
Query: 1 MKAIEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKIL 60
MKAIEV++LRK + AL G+ V GE ++GP+G+GK+T + ++
Sbjct: 1 MKAIEVRDLRKSFDSGR---------IRALNGVNLEVDGGEFISIMGPSGSGKSTLLNMI 51
Query: 61 TTLLEPTSGEARVLGFDIVKEAREIRKR---INLVAEGERTLYWRLTAYENLRYFASIYY 117
L P SG V G D+ +E R R I V + L LTA EN+ ++
Sbjct: 52 GALDVPDSGTICVAGRDLSRERDLSRLRAEEIGFVFQ-LHNLIPNLTALENVEI--PMFA 108
Query: 118 VPKKVAEERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGL 177
V + EER LL V L D+ S G +QR+AIA+AL NDP ++ DEPT L
Sbjct: 109 VKHENMEERAMELLEYVDLADKAHRKPTELSGGERQRVAIARALANDPSIILADEPTGSL 168
Query: 178 DVQSAIFVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIID 221
D +++ V +++L E+E T+++ TH A I I+D
Sbjct: 169 DSRTSQRVLRKLRELQEDEGVTLVVVTHEPDVAAMASRTIRILD 212
>gb|AAF81232.1| (AF263012) ABC transporter ATP binding protein [Streptomyces
griseus subsp. griseus]
Length = 318
Score = 104 bits (257), Expect = 1e-21
Identities = 92/311 (29%), Positives = 149/311 (47%), Gaps = 32/311 (10%)
Query: 22 RKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKILTTLLEPTSGEARVLGFDIVKE 81
+K F AL + V +G ++G LGPNGAGK+TTI++L L PTSG+ RVLG D
Sbjct: 12 KKFGDFTALSRLNLTVPQGVVYGYLGPNGAGKSTTIRMLMGLSRPTSGQVRVLGQDPTDP 71
Query: 82 AREIRKRINLVAEGERTLYWRLTAYENLRYFASIYYVPKKVAEERIRNLLHMVGLWDRKD 141
E+R+RI + GE L RLT + L + + + + L+ G+ +
Sbjct: 72 --EVRRRIGYL-PGELRLDERLTIGQTLASWGRLRGLTDTAYRD---ELVQRFGIDPSR- 124
Query: 142 DLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDVQSAIFVRELIKKLVEEEK---K 198
V S G ++++ + A + PE+L LDEPT GLD ++++ VEE + +
Sbjct: 125 -RVRGLSTGNRRKVGLVGAFMAKPELLILDEPTNGLDP----LMQQVFLATVEEARDNGQ 179
Query: 199 TVLLTTHYMHEAEELCDRIAIIDHGRIIALDTPEGLKKLVRKDTIVEVRVKNYNGEN-PF 257
+VLL++H + E E + D +A++ GR+ A G + +R+ + GE+ P
Sbjct: 180 SVLLSSHILSEVERVADVVAVLQGGRLAA----SGPTQELRRRAAQRFHITFAEGEDVPL 235
Query: 258 GLAKIKEEGEKVVLRGPLDE-------EDIPKLVEFLVKNNAKVLSVEVKEPTLEDVFIK 310
E V R P + L++FL ++ ++ EP LE+ F++
Sbjct: 236 AALAGLEGASDVERRSPEGQVVSLAWAGSPDALLKFLA--GRRITTLTAPEPDLEEAFLE 293
Query: 311 LTGR---GLRD 318
R G RD
Sbjct: 294 YYQRDVPGSRD 304
>pir||H82355 peptide ABC transporter, ATP-binding protein VC0170 [imported] -
Vibrio cholerae (group O1 strain N16961)
>gi|9654573|gb|AAF93346.1| (AE004107) peptide ABC
transporter, ATP-binding protein [Vibrio cholerae]
Length = 571
Score = 104 bits (256), Expect = 2e-21
Identities = 66/240 (27%), Positives = 124/240 (51%), Gaps = 9/240 (3%)
Query: 4 IEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKILTTL 63
++V+N+ + K L + E+ +A ++F V +GE FGL+G +G+GK+T +++ L
Sbjct: 303 LKVENVNLRFVTKDSLFESRREYVQASNNVSFAVHEGETFGLVGESGSGKSTIARVIAGL 362
Query: 64 LEPTSGEARVLGFDIVK-----EAREIRKRINLVAEGERT-LYWRLTAYENLRYFASIYY 117
+P +G G D+ E R +R+++ +V + T + R+ ++ + +
Sbjct: 363 YQPNAGRVTFEGIDLTALKSEHERRPLRRQMQMVFQNPYTSMNPRMKIFDIIAEPIRFHK 422
Query: 118 VPKKVAEER--IRNLLHMVGLWDRKD-DLVMNYSRGMKQRLAIAKALINDPEVLFLDEPT 174
+ + +E R + +LL VGL +S G +QR++IA+AL P +L DEPT
Sbjct: 423 LTRSESETRQIVNDLLEHVGLGKMAGLKYPHEFSGGQRQRISIARALATRPRLLICDEPT 482
Query: 175 LGLDVQSAIFVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRIIALDTPEGL 234
LDV + L+K L +E T+L +H + ++CDR+ ++ G ++ + E L
Sbjct: 483 SALDVSVQAQILNLLKDLQDELNLTMLFISHDLPVIRQMCDRVGVMQMGTLLEVAPTEQL 542
Score = 92.8 bits (227), Expect = 5e-18
Identities = 74/253 (29%), Positives = 123/253 (48%), Gaps = 28/253 (11%)
Query: 1 MKAIEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKIL 60
M +EVKNLR YP + + A+K +T ++++GE+ G++G +GAGK+T +
Sbjct: 1 MSLLEVKNLRIEYPSRHGV-------HAAVKSLTLDIQRGEIVGVVGESGAGKSTVGNAV 53
Query: 61 TTLLEP----TSGEARVLGFDIV----KEAREIR-KRINLVAEGERTLYWRLTAYEN--L 109
LL P GE + G I + RE+R +I + + T L E+
Sbjct: 54 IDLLSPPGTIAGGEVYLNGEKISGLSPQAMREVRGSKIGFIFQDPMTSLNPLFTVEHQLT 113
Query: 110 RYFASIYYVPKKVAEERIRNLLHMVGLWDRKDDLVM---NYSRGMKQRLAIAKALINDPE 166
+ V + A +R +L+ VG+ ++ L +S GM+QR+ IA AL +P+
Sbjct: 114 ETIHANMQVSAEEAYQRALSLMKQVGIPQPENRLKQYPHQFSGGMRQRVVIAIALAGEPD 173
Query: 167 VLFLDEPTLGLDVQSAIFVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRII 226
++ DEPT LDV + LI++L ++ +L TH M + DR+A++ G ++
Sbjct: 174 LIIADEPTTALDVSIQDQILNLIRELCKKNNVGCMLVTHDMGVVSNVTDRVAVMYRGDLV 233
Query: 227 -------ALDTPE 232
L TPE
Sbjct: 234 EFGPTAKVLGTPE 246
>dbj|BAA75354.1| (AB011838) similar to B.subtilis ytsC gene(80%-identity) [Bacillus
halodurans]
Length = 202
Score = 103 bits (255), Expect = 2e-21
Identities = 65/202 (32%), Positives = 109/202 (53%), Gaps = 14/202 (6%)
Query: 1 MKAIEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKIL 60
M +E N+ K Y K+ E LKGI V+KGE ++G +G+GKTT + +L
Sbjct: 1 MAILEATNIHKSYGTKLNKQ-------EVLKGIDIRVEKGEFVSIMGASGSGKTTLLNVL 53
Query: 61 TTLLEPTSGEARVLGFDIV----KEAREIRKRINLVAEGERTLYWRLTAYENLRYFASIY 116
+++ + ++G ++ G ++ KE + RK+ E L LT EN+ SI
Sbjct: 54 SSIDKLSNGSIKIEGSEMTRLKEKELAQFRKKHLGFIFQEYNLLDTLTVKENILLPLSIT 113
Query: 117 YVPKKVAEERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLG 176
+P+K A+E+ + + +G+++ KD S G KQR + A+A I++P ++F DEPT
Sbjct: 114 KIPRKAADEKFKQVATELGIYEIKDKYPNEISGGQKQRASAARAFIHEPSIIFADEPTGA 173
Query: 177 LDVQSAIFVRELIKKLVEEEKK 198
LD +SA +L+ KL + +K
Sbjct: 174 LDSKSA---SDLLGKLQQLNEK 192
>emb|CAB60755.1| (Y18641) ATP-binding protein [Staphylococcus aureus]
>gi|9501787|dbj|BAB03336.1| (AB035452) ABC transporter
[Staphylococcus aureus]
Length = 252
Score = 103 bits (255), Expect = 2e-21
Identities = 71/254 (27%), Positives = 131/254 (50%), Gaps = 19/254 (7%)
Query: 1 MKAIEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKIL 60
M + V+++ K Y KK F+ALK I F+++KGE ++GP+G+GKTT + +L
Sbjct: 1 MTILSVQHVSKTYGKK--------HTFQALKDINFDIQKGEFVAIMGPSGSGKTTLLNVL 52
Query: 61 TTLLEPTSGEARVLGFDIVKEAREIRKRINLVAEG----ERTLYWRLTAYENLRYFASIY 116
+++ + +SG G ++ K ++ + + G + ++ LT EN+ S+
Sbjct: 53 SSIDQISSGSVIANGQELNKLNQKALAKFRKESLGFIFQDYSILPTLTVKENIMLPLSVQ 112
Query: 117 YVPKKVAEERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLG 176
+ K EE + + +G++D + S G +QR A A+A ++ P+++F DEPT
Sbjct: 113 KMSKATMEENYKAITTALGIYDLGNKYPSELSGGQQQRTAAARAFVHKPQIIFADEPTGA 172
Query: 177 LDVQSAIFVRELIKKLVEEEKK---TVLLTTHYMHEAEELCDRIAIIDHGRIIALDTPEG 233
LD +SA +L+++L E K T+++ TH A +R+ ++ G+I EG
Sbjct: 173 LDSKSA---NDLLQRLEEMNKSFDTTIVMVTH-DPVAASFAERVIMLKDGQIHTQLYQEG 228
Query: 234 LKKLVRKDTIVEVR 247
K + IV ++
Sbjct: 229 RSKQAFYEDIVHLQ 242
>pir||E71067 probable ferrichrome transport ATP-binding protein - Pyrococcus
horikoshii >gi|3257652|dbj|BAA30335.1| (AP000005) 250aa
long hypothetical ferrichrome transport ATP-binding
protein [Pyrococcus horikoshii]
Length = 250
Score = 102 bits (253), Expect = 4e-21
Identities = 80/256 (31%), Positives = 130/256 (50%), Gaps = 15/256 (5%)
Query: 1 MKAIEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKIL 60
MK IEV+NL+ + + E L I F + KG +LGPNGAGKTT ++ +
Sbjct: 1 MKGIEVENLKFSHNGR-----------EILHDINFEIDKGSFLIILGPNGAGKTTLLRCI 49
Query: 61 TTLLEPTSGEARVLGFDIVKEAR-EIRKRINLVAEGERTLYWRLTAYENLRYFASIYYVP 119
+L+ G +VLG DI + +R E+ K + V + + R+ + L + P
Sbjct: 50 AGILK-YKGSIKVLGNDIKELSRIELAKLLAYVPQRIEPGFLRVFDFVLLGRKPYMGLNP 108
Query: 120 KKVAEERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDV 179
+ + + + L ++G+ +D ++ S G Q++AIA+A+ + V+ LDEPT LD
Sbjct: 109 GRKDLKAVEDALRLLGIQRLEDRIMKTLSGGELQKVAIARAIAQETPVILLDEPTNNLDP 168
Query: 180 QSAIFVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRIIALDTPEGLKKLVR 239
+S I V E+IK LV + KTV+ H + A + + GR L T E L++ +
Sbjct: 169 KSQIEVMEIIKDLV-KRGKTVVTVMHDLTLALRFGEEFLFLKDGRSTGLLTREELEEKIL 227
Query: 240 KDTI-VEVRVKNYNGE 254
+T V++RV GE
Sbjct: 228 SETYGVKIRVARVEGE 243
>gb|AAG22038.1|AF305387_5 (AF305387) OppF [Bacillus thuringiensis]
Length = 311
Score = 102 bits (252), Expect = 5e-21
Identities = 75/242 (30%), Positives = 127/242 (51%), Gaps = 16/242 (6%)
Query: 2 KAIEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKILT 61
K IEVKN+++ + + +A+ I+F++ +GE FGL+G +G GK+TT + +
Sbjct: 7 KLIEVKNVKQHFDVSGGV-------VKAVNDISFDIYRGETFGLVGESGCGKSTTGRTII 59
Query: 62 TLLEPTSGEARVLGFDIV-KEAREIRKRIN-----LVAEGERTLYWRLTAYENLRYFASI 115
L + T+GE G ++ K++R K+ N + + +L R+T + + I
Sbjct: 60 RLYDATAGEVLFDGENVHGKKSRAELKKFNRKMQMIFQDPYASLNPRMTVGDIIAEGIDI 119
Query: 116 YYVPKKVAE--ERIRNLLHMVGL-WDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDE 172
+ + K E +R+ LL+ VGL + + +S G +QR+ IA+AL +PE + DE
Sbjct: 120 HGLAKSKKERMDRVHELLNTVGLNKEHANRFPHEFSGGQRQRIGIARALAVEPEFIIADE 179
Query: 173 PTLGLDVQSAIFVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRIIALDTPE 232
P LDV V L+KKL +E+ T L H + + + DRI ++ G+I+ L T E
Sbjct: 180 PISALDVSIQAQVVNLLKKLQKEKGLTYLFIAHDLSMVKYISDRIGVMYRGQIVELTTSE 239
Query: 233 GL 234
L
Sbjct: 240 EL 241
>sp|P45073|YHBG_HAEIN PROBABLE ABC TRANSPORTER ATP-BINDING PROTEIN HI1148
>gi|1074660|pir||I64167 hypothetical protein HI1148 -
Haemophilus influenzae (strain Rd KW20)
>gi|1574704|gb|AAC22803.1| (U32794) ABC transporter,
ATP-binding protein [Haemophilus influenzae Rd]
Length = 241
Score = 102 bits (251), Expect = 7e-21
Identities = 71/235 (30%), Positives = 118/235 (50%), Gaps = 16/235 (6%)
Query: 1 MKAIEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKIL 60
M + +NL K Y + + + ++ V E+ GLLGPNGAGKTTT ++
Sbjct: 1 MSILTAENLAKSYKSR-----------KVVSDVSLTVNSNEIVGLLGPNGAGKTTTFYMV 49
Query: 61 TTLLEPTSGEARVLGFDI--VKEAREIRKRINLVAEGERTLYWRLTAYENLRYFASIYY- 117
L+ G+ + G DI + ++ I + + E +++ RLT YENL I
Sbjct: 50 VGLVRQDQGKIVIDGEDISLLPMHNRAQRGIGYLPQ-EASIFRRLTVYENLMAVLEIRKD 108
Query: 118 VPKKVAEERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGL 177
+ + E+ L+ + +D+L S G ++R+ IA+AL +P+ + LDEP G+
Sbjct: 109 LTPQQRREKADELIEEFNISHIRDNLGQALSGGERRRVEIARALAANPKFILLDEPFAGV 168
Query: 178 DVQSAIFVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRIIALDTPE 232
D S ++++I L VL+T H + E ++C+R I+ G+IIA TPE
Sbjct: 169 DPISVSDIKKIITDL-RNRGLGVLITDHNVRETLDVCERAYIVGAGKIIATGTPE 222
>gb|AAD43475.1|AF125260_3 (AF125260) NosF [Rhodobacter sphaeroides f. sp. denitrificans]
Length = 294
Score = 101 bits (250), Expect = 9e-21
Identities = 88/287 (30%), Positives = 134/287 (46%), Gaps = 11/287 (3%)
Query: 29 ALKGITFNVKKGELFGLLGPNGAGKTTTIKILTTLLEPTSGEARVLGFDIVKEAREIRKR 88
AL ++F V GE LLG NGAGK+T +K++ L+ G V G A +
Sbjct: 16 ALDAVSFAVAPGERVALLGHNGAGKSTLMKLVLGLIAADGGRISVGGHAPGSHAA---RA 72
Query: 89 INLVAEGERTLYWRLTAYENLRYFASIYYVPKKVAEERIRNLLHMVGLWDRKDDLVMNYS 148
+ + LT E LRY+ + + + LL VGL + YS
Sbjct: 73 LTAYLPENAAFHPALTGAETLRYYLRL----RGEDPAKAGALLERVGLGAAAQRRIGTYS 128
Query: 149 RGMKQRLAIAKALINDPEVLFLDEPTLGLDVQSAIFVRELIKKLVEEEKKTVLLTTHYMH 208
+GM+QR+ +A+ALI P +L LDEPT GLD S L+ +L + +LL++H +
Sbjct: 129 KGMRQRVGLAQALIGHPRLLVLDEPTSGLDPVSRRDFYALLAELA-ADGAAILLSSHALT 187
Query: 209 EAEELCDRIAIIDHGRIIALDTPEGLKKLVRKDTIVEVRVK-NYNGENPFGLAKIKEEGE 267
E E DRIAI+ GR++A DT L++ ++V + E L + G
Sbjct: 188 EVEARTDRIAILSGGRLMANDTLANLRRQAALPIRLQVSARPGAADEVAHRLQGGRRNGV 247
Query: 268 KVVLRGPLDEEDIPKLVEFLVKNNAKVLSVEVKEPTLEDVFIKLTGR 314
V L DE+ + +L + V VE+ P+LED++ + R
Sbjct: 248 LVDLSCRPDEK-LDRL-GAITALGPMVEDVEILPPSLEDLYTHYSRR 292
>pir||C65111 probable ABC transporter (ntrA/rpoN 5'region) - Escherichia coli
(strain K-12) >gi|606140|gb|AAA58003.1| (U18997)
ORF_o241 [Escherichia coli] >gi|1789593|gb|AAC76233.1|
(AE000399) putative ATP-binding component of a transport
system [Escherichia coli K12]
Length = 241
Score = 101 bits (249), Expect = 1e-20
Identities = 69/233 (29%), Positives = 115/233 (48%), Gaps = 14/233 (6%)
Query: 1 MKAIEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKIL 60
M + KNL K Y + ++ ++ V GE+ GLLGPNGAGKTTT ++
Sbjct: 1 MATLTAKNLAKAYKGR-----------RVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMV 49
Query: 61 TTLLEPTSGEARVLGFDIVKEAREIRKRINL-VAEGERTLYWRLTAYENLRYFASIYY-V 118
++ +G + DI R R + E +++ RL+ Y+NL I +
Sbjct: 50 VGIVPRDAGNIIIDDDDISLLPLHARARRGIGYLPQEASIFRRLSVYDNLMAVLQIRDDL 109
Query: 119 PKKVAEERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLD 178
+ E+R L+ + +D + + S G ++R+ IA+AL +P+ + LDEP G+D
Sbjct: 110 SAEQREDRANELMEEFHIEHLRDSMGQSLSGGERRRVEIARALAANPKFILLDEPFAGVD 169
Query: 179 VQSAIFVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRIIALDTP 231
S I ++ +I+ L + VL+T H + E +C+R I+ G +IA TP
Sbjct: 170 PISVIDIKRIIEHL-RDSGLGVLITDHNVRETLAVCERAYIVSQGHLIAHGTP 221
>pir||F70032 ABC transporter (ATP-binding protein) homolog yvcR - Bacillus
subtilis >gi|1945657|emb|CAB08064.1| (Z94043)
hypothetical protein [Bacillus subtilis]
>gi|2635983|emb|CAB15475.1| (Z99121) similar to ABC
transporter (ATP-binding protein) [Bacillus subtilis]
Length = 259
Score = 101 bits (249), Expect = 1e-20
Identities = 72/231 (31%), Positives = 111/231 (47%), Gaps = 10/231 (4%)
Query: 1 MKAIEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKIL 60
M ++ NL K Y + ++AL +V KGE G++GP+G+GKTT + +L
Sbjct: 1 MNVLQTTNLSKTYYSN-----KGTISYQALSAFDLSVSKGEFVGIMGPSGSGKTTLLNLL 55
Query: 61 TTLLEPTSGEARVLGFDIV----KEAREIRKRINLVAEGERTLYWRLTAYENLRYFASIY 116
T+ +PT GE + G +E R+R + L LT EN+ ++
Sbjct: 56 ATIDKPTQGEMMINGIQPKTLKDQELALFRRRELGFVFQDFNLLDTLTIRENILLPLALD 115
Query: 117 YVPKKVAEERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLG 176
V + E R+ L + + D S G +QR A A+A+I++P ++ DEPT
Sbjct: 116 KVKLREMEARLDELADTLQIKHILDHRTYEVSGGQQQRAACARAIIHNPALILADEPTGN 175
Query: 177 LDVQSAIFVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRIIA 227
LD +SA V + +L EE++ T+LL TH A C RI I GR +
Sbjct: 176 LDSKSAKQVMNTLAQLNEEKEATILLVTHDA-TAASFCKRIVFIKDGRFFS 225
>sp|P31220|YHBG_ECOLI PROBABLE ABC TRANSPORTER ATP-BINDING PROTEIN IN MURA-RPON
INTERGENIC REGION (ORF1) (ORF241)
>gi|2126052|pir||I60351 rpoN protein - Escherichia coli
>gi|285780|dbj|BAA02314.1| (D12938) ORF1 [Escherichia
coli] >gi|551337|gb|AAB60162.1| (U12684) orf241
[Escherichia coli]
Length = 241
Score = 101 bits (248), Expect = 2e-20
Identities = 69/233 (29%), Positives = 114/233 (48%), Gaps = 14/233 (6%)
Query: 1 MKAIEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKIL 60
M + KNL K Y + ++ ++ V GE+ GLLGPNGAGKTTT ++
Sbjct: 1 MATLTAKNLAKAYKGR-----------RVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMV 49
Query: 61 TTLLEPTSGEARVLGFDIVKEAREIRKRINL-VAEGERTLYWRLTAYENLRYFASIYY-V 118
++ G + DI R R + E +++ RL+ Y+NL I +
Sbjct: 50 VGIVPARCGNIIIDDDDISLLPLHARARRGIGYLPQEASIFRRLSVYDNLMAVLQIRDDL 109
Query: 119 PKKVAEERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLD 178
+ E+R L+ + +D + + S G ++R+ IA+AL +P+ + LDEP G+D
Sbjct: 110 SAEQREDRANELMEEFHIEHLRDSMGQSLSGGERRRVEIARALAANPKFILLDEPFAGVD 169
Query: 179 VQSAIFVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRIIALDTP 231
S I ++ +I+ L + VL+T H + E +C+R I+ G +IA TP
Sbjct: 170 PISVIDIKRIIEHL-RDSGLGVLITDHNVRETLAVCERAYIVSQGHLIAHGTP 221
>dbj|BAA95937.1| (AB035092) Orf5 [Clostridium perfringens]
Length = 369
Score = 101 bits (248), Expect = 2e-20
Identities = 77/302 (25%), Positives = 144/302 (47%), Gaps = 32/302 (10%)
Query: 1 MKAIEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKIL 60
M + +K++ K+YP + A+K + E +GP+G GK+TT++++
Sbjct: 1 MANLSLKHIYKVYPGDVT----------AVKDFNLEIADKEFIVFVGPSGCGKSTTLRMI 50
Query: 61 TTLLEPTSGEARVLGFDIVKEAREIRKRINLVAEGERTLYWRLTAYENLRYFASIYYVPK 120
L E + GE + G +V E + I +V + LY +T Y+N+ + + VPK
Sbjct: 51 AGLEEISKGELYI-GDRLVNEVEPKERDIAMVFQSY-ALYPHMTVYDNMAFGLKLRKVPK 108
Query: 121 KVAEERIRN---LLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGL 177
++++++ +L + L DRK + S G +QR+A+ +A++ +P+V +DEP L
Sbjct: 109 DEIDKKVKDAAKILDIEHLLDRKPKAL---SGGQRQRVALGRAIVREPKVFLMDEPLSNL 165
Query: 178 DVQSAIFVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRIIALDTPEGLKKL 237
D + + +R I KL + + T + TH EA + RI ++ G + +D+P+ +
Sbjct: 166 DAKLRVQMRTEISKLHQRLQTTFIYVTHDQVEAMTMGTRIVVMKDGIVQQVDSPQEI--- 222
Query: 238 VRKDTIVEVRVKNYNGENPFGL--AKIKEEGEKVV-------LRGPLDEEDIPKLVEFLV 288
+ + V + G IKEEG K + P+D+ + K ++
Sbjct: 223 --YNNPANIFVAGFIGSPQMNFIDGTIKEEGGKYFACFQSEKIEMPMDKARLLKEKGYIG 280
Query: 289 KN 290
KN
Sbjct: 281 KN 282
>dbj|BAB04859.1| (AP001511) sugar ABC transportor (ATP-binding protein) [Bacillus
halodurans]
Length = 365
Score = 99.8 bits (245), Expect = 4e-20
Identities = 64/241 (26%), Positives = 117/241 (47%), Gaps = 30/241 (12%)
Query: 1 MKAIEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKIL 60
M I++KN+ K+Y + +A+ ++K E +GP+G GK+TT++++
Sbjct: 1 MAEIQLKNVYKIYDGDV----------QAVTDFNLDIKDKEFIVFVGPSGCGKSTTLRMI 50
Query: 61 TTLLEPTSGEARVLGFDIVKEAREIRKRINLVAEGER---------TLYWRLTAYENLRY 111
L + + G+ + G KR+N VA +R LY + Y+N+ +
Sbjct: 51 AGLEDISKGDLLIGG-----------KRMNDVAPKDRDIAMVFQNYALYPHMNVYDNMAF 99
Query: 112 FASIYYVPKKVAEERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLD 171
+ K ++R++N ++GL + D S G +QR+A+ +A++ DP+V +D
Sbjct: 100 GLKLRKFKKDEIDKRVKNAAKILGLEEMLDRKPKAMSGGQRQRVALGRAIVRDPQVFLMD 159
Query: 172 EPTLGLDVQSAIFVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRIIALDTP 231
EP LD + + +R I KL + + T + TH EA + RI I+ G I + +P
Sbjct: 160 EPLSNLDAKLRVQMRAEITKLHQRLQTTTIYVTHDQTEAMTMATRIVIMKDGVIQQVGSP 219
Query: 232 E 232
+
Sbjct: 220 K 220
>pir||F82386 amino acid ABC transporter, ATP-binding protein VCA1037 [imported]
- Vibrio cholerae (group O1 strain N16961)
>gi|9658480|gb|AAF96931.1| (AE004429) amino acid ABC
transporter, ATP-binding protein [Vibrio cholerae]
Length = 239
Score = 99.5 bits (244), Expect = 5e-20
Identities = 76/235 (32%), Positives = 120/235 (50%), Gaps = 16/235 (6%)
Query: 1 MKAIEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKIL 60
MK IE + K Y + F+ALK I+ V KGE+ + GP+G+GK+T I+ +
Sbjct: 1 MKVIEFHQVSKWYGQ-----------FQALKSISLTVNKGEIVVICGPSGSGKSTLIRTV 49
Query: 61 TTLLEPTSGEARVLGFDIVKEAREIRKRINLVAEGERTLYWRLTAYENLRYFA-SIYYVP 119
L SGE VL ++ + R K I +V + L+ LT ENL +
Sbjct: 50 NGLESIDSGEIIVLP-ELDERTRRSGK-IGMVFQ-HFNLFPHLTVLENLTLAPIRTLKLS 106
Query: 120 KKVAEERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLDV 179
+ A+ER + L V + D+ + S G +QR+AIA++L PE+L DEPT LD
Sbjct: 107 AQEAKERAYHFLQRVKITDQTHKYPIQLSGGQQQRVAIARSLCMQPEILLFDEPTSALDP 166
Query: 180 QSAIFVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRIIALDTPEGL 234
++ V E++ L ++ T++ TH M A ++ R+ +D G I+ + +PE L
Sbjct: 167 ETINEVLEVMVDLA-QDGITMMCVTHEMGFARKVAHRVMFMDEGEILEVGSPEQL 220
>gi|10956099 ABC transporter subunit PenJ [Pediococcus pentosaceus]
>gi|10956122|ref|NP_037574.1| putative ABC transporter
ATP-binding subunit [Pediococcus pentosaceus]
>gi|4587878|gb|AAD25904.1|AF069302_13 (AF069302) ABC
transporter subunit PenJ [Pediococcus pentosaceus]
>gi|5091680|gb|AAD39627.1|AF033858_10 (AF033858)
putative ABC transporter ATP-binding subunit
[Pediococcus pentosaceus]
Length = 292
Score = 98.7 bits (242), Expect = 8e-20
Identities = 70/228 (30%), Positives = 117/228 (50%), Gaps = 30/228 (13%)
Query: 1 MKAIEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKIL 60
M +E+ N+ +P K+ L +E + G+T L+GPNGAGKTT IK +
Sbjct: 1 MNLLEINNITMKFPMKVALDNISLEISDE-SGVT---------ALIGPNGAGKTTLIKCI 50
Query: 61 TTLLEPTSGEARVLGFDIVKEAREIRKRINLVAEGERTLYW--RLTAYENLRYFASIYYV 118
L + G I + N ++ T ++ LTA E ++ A++
Sbjct: 51 MGLNQEYEGS--------------IVYQTNKISYCPDTPFFDTNLTAIEVMQQSAALS-- 94
Query: 119 PKKVAEERIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGLD 178
+ R LL MVGL + +D + +SRGM QRL IA +LI DPEVL LDEPT LD
Sbjct: 95 SQNYELHSARKLLKMVGLDEARDRFINGFSRGMLQRLGIAASLILDPEVLILDEPTSALD 154
Query: 179 VQSAIFVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRII 226
+ +LIK + ++ + V++++H + + E++ D + +++ G+++
Sbjct: 155 PAGQRDILKLIKTISKD--RAVIVSSHNLKDMEQIADNLIVLNEGKLV 200
>pir||B72417 sugar ABC transporter, ATP-binding protein - Thermotoga maritima
(strain MSB8) >gi|4980606|gb|AAD35209.1|AE001697_9
(AE001697) sugar ABC transporter, ATP-binding protein
[Thermotoga maritima]
Length = 520
Score = 97.5 bits (239), Expect = 2e-19
Identities = 71/263 (26%), Positives = 126/263 (46%), Gaps = 36/263 (13%)
Query: 1 MKAIEVKNLRKLYPKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKIL 60
M+ ++ K + K +P + A+ + F V + E+ L+G NGAGK+T IKIL
Sbjct: 12 MEILKAKGIVKRFPGVV-----------AVDNVDFEVYENEIVSLIGENGAGKSTLIKIL 60
Query: 61 TTLLEPTSGEARVLGFDIVKEAREIRKRINLVAEGERTLYWRLTAYENLRYFASIYYVPK 120
T +L+P +GE V G E E ++ +G ++ L +N+ +I+ +
Sbjct: 61 TGVLKPDAGEILVNG-----ERVEFHSPVDAFKKGISVIHQELNLCDNMTVAENIFLAYE 115
Query: 121 KVAEE---------------RIRNLLHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDP 165
V + R + LL ++G D LV N + +Q + I KAL+ +P
Sbjct: 116 AVRGQKRTLSSRVDENYMYTRSKELLDLIGAKFSPDALVRNLTTAQRQMVEICKALVKEP 175
Query: 166 EVLFLDEPTLGLDVQSAIFVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRI 225
++F+DEPT L V+ + E+I ++++ +V+ +H + E + DRI ++ G+
Sbjct: 176 RIIFMDEPTSSLTVEETERLFEII-EMLKSRGISVVFVSHRLDEVMRISDRIVVMRDGKR 234
Query: 226 IALDTPEGLKKLVRKDTIVEVRV 248
I E K DTI+++ V
Sbjct: 235 IG----ELKKGEFDVDTIIKMMV 253
Score = 85.4 bits (208), Expect = 8e-16
Identities = 60/231 (25%), Positives = 119/231 (50%), Gaps = 22/231 (9%)
Query: 14 PKKIPLPFRKIEWFEALKGITFNVKKGELFGLLGPNGAGKTTTIKILTTLLEPTSGEARV 73
P +I L R ++W + +K ++F V+KGE+ G G GAG+T T+ ++ + + SG+ V
Sbjct: 268 PGEIALEVRNLKWKDKVKNVSFEVRKGEVLGFAGLVGAGRTETMLLVFGVNQKESGDIYV 327
Query: 74 LG--FDIVKEAREIRKRINLVAEGERT--LYWRLTAYENLRYFASIYYVPK--------- 120
G +I I+ I L+ E + L R+T +N+ S+ + +
Sbjct: 328 NGRKVEIKNPEDAIKMGIGLIPEDRKLQGLVLRMTVKDNI-VLPSLKKISRWGLVLDERK 386
Query: 121 --KVAEERIRNL-LHMVGLWDRKDDLVMNYSRGMKQRLAIAKALINDPEVLFLDEPTLGL 177
+++E+ ++ L + ++ + N S G +Q++ +AK L + ++L DEPT G+
Sbjct: 387 EEEISEDYVKRLSIKTPSIY----QITENLSGGNQQKVVLAKWLATNADILIFDEPTRGI 442
Query: 178 DVQSAIFVRELIKKLVEEEKKTVLLTTHYMHEAEELCDRIAIIDHGRIIAL 228
DV + + +I++L + K +++++ + E L DRI ++ G I A+
Sbjct: 443 DVGAKAEIHRMIRELAAQGKAVIMISSE-LPEILNLSDRIVVMWEGEITAV 492
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.319 0.141 0.397
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 114455139
Number of Sequences: 2977
Number of extensions: 4767389
Number of successful extensions: 26202
Number of sequences better than 1.0e-10: 2012
Number of HSP's better than 0.0 without gapping: 262
Number of HSP's successfully gapped in prelim test: 1751
Number of HSP's that attempted gapping in prelim test: 22473
Number of HSP's gapped (non-prelim): 2521
length of query: 318
length of database: 189,106,746
effective HSP length: 56
effective length of query: 262
effective length of database: 155,591,474
effective search space: 40764966188
effective search space used: 40764966188
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 165 (68.7 bits)