BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB2096 (PAB2096) DE:aminopeptidase from family M42
(346 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||D75152 aminopeptidase m42 PAB2096 [imported] - Pyrococcus a... 696 0.0
pir||E71193 probable operon protein Frv - Pyrococcus horikoshii ... 671 0.0
pir||JC5634 deblocking aminopeptidase (EC 3.4.11.-) [validated] ... 341 6e-93
pir||E71029 probable Frv operon protein FrvX - Pyrococcus horiko... 341 8e-93
pir||D75105 aminopeptidase m42 PAB0437 [imported] - Pyrococcus a... 340 2e-92
sp|Q57975|Y555_METJA HYPOTHETICAL PROTEIN MJ0555 >gi|2127881|pir... 228 6e-59
pir||A69157 endo-1,4-beta-glucanase - Methanobacterium thermoaut... 210 2e-53
gi|11499384 endoglucanase (celM) [Archaeoglobus fulgidus] >gi|74... 201 1e-50
prf||2113327A endoglucanase [Clostridium thermocellum] 189 6e-47
sp|P55742|GUNM_CLOTM ENDOGLUCANASE M (EGM) (ENDO-1,4-BETA-GLUCAN... 189 6e-47
gb|AAD47606.1|AF146565_2 (AF146565) endoglucanase [Methanococcus... 189 6e-47
pir||B72301 endoglucanase - Thermotoga maritima (strain MSB8) >g... 185 5e-46
pir||E75067 aminopeptidase m42 PAB2375 [imported] - Pyrococcus a... 183 3e-45
dbj|BAB06851.1| (AP001517) endo-1,4-beta-glucanase [Bacillus hal... 178 1e-43
pir||B71165 hypothetical protein PH0519 - Pyrococcus horikoshii ... 172 5e-42
pir||D72301 endoglucanase - Thermotoga maritima (strain MSB8) >g... 168 1e-40
pir||A72609 probable deblocking aminopeptidase APE1335 - Aeropyr... 166 5e-40
sp|P32153|FRVX_ECOLI PUTATIVE FRV OPERON PROTEIN FRVX >gi|541108... 165 8e-40
pir||A69984 endo-1,4-beta-glucanase homolog ysdC - Bacillus subt... 164 1e-39
pir||E75542 probable endoglucanase - Deinococcus radiodurans (st... 164 1e-39
pir||B69998 endo-1,4-beta-glucanase homolog ytoP - Bacillus subt... 160 2e-38
sp|P39366|SGCX_ECOLI PUTATIVE SGC REGION PROTEIN SGCX >gi|743557... 151 1e-35
dbj|BAB06976.1| (AP001518) endo-1,4-beta-glucanase [Bacillus hal... 151 1e-35
gb|AAG19796.1| (AE005064) endoglucanase; CelM [Halobacterium sp.... 150 2e-35
pir||S56530 hypothetical protein f383 - Escherichia coli >gi|537... 149 5e-35
pir||E65012 hypothetical protein b2384 - Escherichia coli (strai... 148 1e-34
pir||C72301 endoglucanase - Thermotoga maritima (strain MSB8) >g... 144 2e-33
pir||D82912 Endo-1,4-beta-glucanase UU280 [imported] - Ureaplasm... 135 8e-31
sp|Q48677|PEPA_LACLC GLUTAMYL-AMINOPEPTIDASE >gi|1072381|emb|CAA... 122 8e-27
pir||S72475 glucanase (EC 3.2.1.-) - Anabaena variabilis >gi|152... 76 4e-13
pir||D83374 hypothetical protein PA2172 [imported] - Pseudomonas... 75 1e-12
pir||D83214 conserved hypothetical protein PA3461 [imported] - P... 74 3e-12
pir||G75040 probable aminopeptidase (EC 3.4.11.-) PAB0869 - Pyro... 72 1e-11
>pir||D75152 aminopeptidase m42 PAB2096 [imported] - Pyrococcus abyssi (strain
Orsay) >gi|5457809|emb|CAB49299.1| (AJ248284)
aminopeptidase from family M42 [Pyrococcus abyssi]
Length = 346
Score = 696 bits (1778), Expect = 0.0
Identities = 346/346 (100%), Positives = 346/346 (100%)
Query: 1 MVDWKLMQEIIEAPGVSGYEFLGIRDLVVDLLKEVADEVKVDKLGNVIAHFKGSSPRVMV 60
MVDWKLMQEIIEAPGVSGYEFLGIRDLVVDLLKEVADEVKVDKLGNVIAHFKGSSPRVMV
Sbjct: 1 MVDWKLMQEIIEAPGVSGYEFLGIRDLVVDLLKEVADEVKVDKLGNVIAHFKGSSPRVMV 60
Query: 61 SAHMDKIGVMVNHIDNNGYLHIVPIGGVLPETLVAQRIRFFTEKGERYGVVGVLPPHLRR 120
SAHMDKIGVMVNHIDNNGYLHIVPIGGVLPETLVAQRIRFFTEKGERYGVVGVLPPHLRR
Sbjct: 61 SAHMDKIGVMVNHIDNNGYLHIVPIGGVLPETLVAQRIRFFTEKGERYGVVGVLPPHLRR 120
Query: 121 GQQDKGGKIDWDQIVVDVGASNKEEAEEMGFKVGTVGEFAPNFTRLSEHRFATPYLDDRI 180
GQQDKGGKIDWDQIVVDVGASNKEEAEEMGFKVGTVGEFAPNFTRLSEHRFATPYLDDRI
Sbjct: 121 GQQDKGGKIDWDQIVVDVGASNKEEAEEMGFKVGTVGEFAPNFTRLSEHRFATPYLDDRI 180
Query: 181 CLYAMIEAARQLGEHEADVYIVASVQEEVGLRGARVASYAIDPEIGIAMDVTFAKQPHDK 240
CLYAMIEAARQLGEHEADVYIVASVQEEVGLRGARVASYAIDPEIGIAMDVTFAKQPHDK
Sbjct: 181 CLYAMIEAARQLGEHEADVYIVASVQEEVGLRGARVASYAIDPEIGIAMDVTFAKQPHDK 240
Query: 241 GKIVPELGKGPVMDVGPNINPKLRAFADEVAKKYEIPLQVEPSPRPTGTDANVMQINREG 300
GKIVPELGKGPVMDVGPNINPKLRAFADEVAKKYEIPLQVEPSPRPTGTDANVMQINREG
Sbjct: 241 GKIVPELGKGPVMDVGPNINPKLRAFADEVAKKYEIPLQVEPSPRPTGTDANVMQINREG 300
Query: 301 VATAVLSIPIRYMHSQVELADARDVDNTIKLAKALLEELKPMDLTP 346
VATAVLSIPIRYMHSQVELADARDVDNTIKLAKALLEELKPMDLTP
Sbjct: 301 VATAVLSIPIRYMHSQVELADARDVDNTIKLAKALLEELKPMDLTP 346
>pir||E71193 probable operon protein Frv - Pyrococcus horikoshii
>gi|3258257|dbj|BAA30940.1| (AP000007) 354aa long
hypothetical operon protein Frv [Pyrococcus horikoshii]
Length = 354
Score = 671 bits (1713), Expect = 0.0
Identities = 328/346 (94%), Positives = 341/346 (97%)
Query: 1 MVDWKLMQEIIEAPGVSGYEFLGIRDLVVDLLKEVADEVKVDKLGNVIAHFKGSSPRVMV 60
MVDWKLMQEIIEAPGVSGYE LGIRD+VVD+LKEVADEVKVDKLGNVIAHFKGSSPR+MV
Sbjct: 9 MVDWKLMQEIIEAPGVSGYEHLGIRDIVVDVLKEVADEVKVDKLGNVIAHFKGSSPRIMV 68
Query: 61 SAHMDKIGVMVNHIDNNGYLHIVPIGGVLPETLVAQRIRFFTEKGERYGVVGVLPPHLRR 120
+AHMDKIGVMVNHID +GYLHIVPIGGVLPETLVAQRIRFFTEKGERYGVVGVLPPHLRR
Sbjct: 69 AAHMDKIGVMVNHIDKDGYLHIVPIGGVLPETLVAQRIRFFTEKGERYGVVGVLPPHLRR 128
Query: 121 GQQDKGGKIDWDQIVVDVGASNKEEAEEMGFKVGTVGEFAPNFTRLSEHRFATPYLDDRI 180
GQ+DKG KIDWDQIVVDVGAS+KEEAEEMGF+VGTVGEFAPNFTRL+EHRFATPYLDDRI
Sbjct: 129 GQEDKGSKIDWDQIVVDVGASSKEEAEEMGFRVGTVGEFAPNFTRLNEHRFATPYLDDRI 188
Query: 181 CLYAMIEAARQLGEHEADVYIVASVQEEVGLRGARVASYAIDPEIGIAMDVTFAKQPHDK 240
CLYAMIEAARQLG+HEAD+YIV SVQEEVGLRGARVASYAI+PE+GIAMDVTFAKQPHDK
Sbjct: 189 CLYAMIEAARQLGDHEADIYIVGSVQEEVGLRGARVASYAINPEVGIAMDVTFAKQPHDK 248
Query: 241 GKIVPELGKGPVMDVGPNINPKLRAFADEVAKKYEIPLQVEPSPRPTGTDANVMQINREG 300
GKIVPELGKGPVMDVGPNINPKLRAFADEVAKKYEIPLQVEPSPRPTGTDANVMQINREG
Sbjct: 249 GKIVPELGKGPVMDVGPNINPKLRAFADEVAKKYEIPLQVEPSPRPTGTDANVMQINREG 308
Query: 301 VATAVLSIPIRYMHSQVELADARDVDNTIKLAKALLEELKPMDLTP 346
VATAVLSIPIRYMHSQVELADARDVDNTIKLAKALLEELKPMD TP
Sbjct: 309 VATAVLSIPIRYMHSQVELADARDVDNTIKLAKALLEELKPMDFTP 354
>pir||JC5634 deblocking aminopeptidase (EC 3.4.11.-) [validated] - Pyrococcus
furiosus
Length = 348
Score = 341 bits (866), Expect = 6e-93
Identities = 172/350 (49%), Positives = 245/350 (69%), Gaps = 8/350 (2%)
Query: 1 MVDWKLMQEIIEAPGVSGYEFLGIRDLVVDLLKEVADEVKVDKLGNVIAHFKGSSPRVMV 60
MVD++L+++++EAPGVSGYEF+GIRD+V++ +K+ DEV VDKLGNVIAH KG P+VM+
Sbjct: 1 MVDYELLKKVVEAPGVSGYEFMGIRDVVIEEIKDYVDEVNVDKLGNVIAHKKGEGPKVMI 60
Query: 61 SAHMDKIGVMVNHIDNNGYLHIVPIGGVLPETLVAQRIRFFTEKGE-RYGVVGVLPPHLR 119
+AHMD+IG+MV HI+ NG+L + PIGG+ P TL+AQR + +KG+ YGV G +PPH++
Sbjct: 61 AAHMDQIGLMVTHIEKNGFLRVAPIGGIDPRTLIAQRFNVWIDKGKFIYGVGGSVPPHIQ 120
Query: 120 RGQQDKGGKIDWDQIVVDVGASNKEEAEEMGFKVGTVGEFAPNFTRLSEHRFATPYLDDR 179
+ +D+ DWDQI +D+GA +KEEAEE+G K+GT+ + RL +HRF + DDR
Sbjct: 121 K-PEDRKKAPDWDQIFIDIGAESKEEAEELGVKIGTIVTWDGRLERLGKHRFVSIAFDDR 179
Query: 180 ICLYAMIEAARQLGEHEADVYIVASVQEEVGLRGARVASYAIDPEIGIAMDVTFAKQ--P 237
I +Y +IE ARQL + +AD+Y VA+VQEEVGLRGAR +++ I+P+ G A+DVT A
Sbjct: 180 IAVYTLIETARQLQDTKADIYFVATVQEEVGLRGARTSAFGINPDYGFAIDVTIAADVPG 239
Query: 238 HDKGKIVPELGKG---PVMDVGPNINPKLRAFADEVAKKYEIPLQVEPSPRPTGTDANVM 294
+ K V +LGKG +MD +P + + +E+AKKYEIP Q + GTDA +
Sbjct: 240 TPEHKQVTQLGKGTAIKIMDRSVICHPTIVRWMEELAKKYEIPYQWD-ILLGGGTDAGAI 298
Query: 295 QINREGVATAVLSIPIRYMHSQVELADARDVDNTIKLAKALLEELKPMDL 344
+ R GV T +SIP RY+HS E+ D RDVD ++KL +LE + + +
Sbjct: 299 HLTRAGVPTGAVSIPARYIHSNAEVVDERDVDASVKLMVKVLEHIHELKI 348
>pir||E71029 probable Frv operon protein FrvX - Pyrococcus horikoshii
>gi|3257954|dbj|BAA30637.1| (AP000006) 353aa long
hypothetical Frv operon protein FrvX [Pyrococcus
horikoshii]
Length = 353
Score = 341 bits (865), Expect = 8e-93
Identities = 173/350 (49%), Positives = 246/350 (69%), Gaps = 8/350 (2%)
Query: 1 MVDWKLMQEIIEAPGVSGYEFLGIRDLVVDLLKEVADEVKVDKLGNVIAHFKGSSPRVMV 60
MVD++L+++++EAPGVSGYEFLGIRD+V++ +K+ DEVKVDKLGNVIAH KG P+VM+
Sbjct: 6 MVDYELLKKVVEAPGVSGYEFLGIRDVVIEEIKDYVDEVKVDKLGNVIAHKKGEGPKVMI 65
Query: 61 SAHMDKIGVMVNHIDNNGYLHIVPIGGVLPETLVAQRIRFFTEKGE-RYGVVGVLPPHLR 119
+AHMD+IG+MV HI+ NG+L + PIGGV P+TL+AQR + + +KG+ YGV +PPH++
Sbjct: 66 AAHMDQIGLMVTHIEKNGFLRVAPIGGVDPKTLIAQRFKVWIDKGKFIYGVGASVPPHIQ 125
Query: 120 RGQQDKGGKIDWDQIVVDVGASNKEEAEEMGFKVGTVGEFAPNFTRLSEHRFATPYLDDR 179
+ +D+ DWDQI +D+GA +KEEAE+MG K+GTV + RL +HRF + DDR
Sbjct: 126 K-PEDRKKAPDWDQIFIDIGAESKEEAEDMGVKIGTVITWDGRLERLGKHRFVSIAFDDR 184
Query: 180 ICLYAMIEAARQLGEHEADVYIVASVQEEVGLRGARVASYAIDPEIGIAMDVTFAKQ--P 237
I +Y ++E A+QL + +ADVY VA+VQEEVGLRGAR +++ I+P+ G A+DVT A
Sbjct: 185 IAVYTILEVAKQLKDAKADVYFVATVQEEVGLRGARTSAFGIEPDYGFAIDVTIAADIPG 244
Query: 238 HDKGKIVPELGKG---PVMDVGPNINPKLRAFADEVAKKYEIPLQVEPSPRPTGTDANVM 294
+ K V LGKG +MD +P + + +E+AKK+EIP Q+E GTDA +
Sbjct: 245 TPEHKQVTHLGKGTAIKIMDRSVICHPTIVRWLEELAKKHEIPYQLE-ILLGGGTDAGAI 303
Query: 295 QINREGVATAVLSIPIRYMHSQVELADARDVDNTIKLAKALLEELKPMDL 344
+ + GV T LS+P RY+HS E+ D RDVD T++L LE + + +
Sbjct: 304 HLTKAGVPTGALSVPARYIHSNTEVVDERDVDATVELMTKALENIHELKI 353
>pir||D75105 aminopeptidase m42 PAB0437 [imported] - Pyrococcus abyssi (strain
Orsay) >gi|5458068|emb|CAB49557.1| (AJ248285)
aminopeptidase from family M42 [Pyrococcus abyssi]
Length = 348
Score = 340 bits (862), Expect = 2e-92
Identities = 174/350 (49%), Positives = 246/350 (69%), Gaps = 8/350 (2%)
Query: 1 MVDWKLMQEIIEAPGVSGYEFLGIRDLVVDLLKEVADEVKVDKLGNVIAHFKGSSPRVMV 60
MV+++L+++++EAPGVSGYEFLGIRD+V++ +K+ DEVKVDKLGNVIAH KG P+VM+
Sbjct: 1 MVNYELLKKVVEAPGVSGYEFLGIRDVVIEEIKDYVDEVKVDKLGNVIAHRKGEGPKVMI 60
Query: 61 SAHMDKIGVMVNHIDNNGYLHIVPIGGVLPETLVAQRIRFFTEKGE-RYGVVGVLPPHLR 119
+AHMD+IG+MV +I+ NG+L + PIGGV P+TL+AQR + + +K + YGV +PPH++
Sbjct: 61 AAHMDQIGLMVTNIEKNGFLRVAPIGGVDPKTLIAQRFKVWIDKDKFIYGVGASVPPHIQ 120
Query: 120 RGQQDKGGKIDWDQIVVDVGASNKEEAEEMGFKVGTVGEFAPNFTRLSEHRFATPYLDDR 179
+ ++ K +WDQI +D+GA +KEEAEEMG ++GTV + RL +HRF + DDR
Sbjct: 121 KPEERKKAP-EWDQIFIDIGAESKEEAEEMGVRIGTVITWDGRLERLGKHRFVSIAFDDR 179
Query: 180 ICLYAMIEAARQLGEHEADVYIVASVQEEVGLRGARVASYAIDPEIGIAMDVTFAKQ--P 237
I +Y M+E ARQL + +ADVY VA+VQEEVGLRGAR +++AI+P+ G A+DVT A
Sbjct: 180 IAVYTMLEVARQLEDTKADVYFVATVQEEVGLRGARTSAFAIEPDYGFAIDVTIAADVPG 239
Query: 238 HDKGKIVPELGKG---PVMDVGPNINPKLRAFADEVAKKYEIPLQVEPSPRPTGTDANVM 294
+ K V LGKG +MD +P + + +E+AKKYEIP Q+E GTDA +
Sbjct: 240 TPEHKQVTHLGKGTAIKIMDRSVICHPTIVRWLEELAKKYEIPYQLE-ILLGGGTDAGAI 298
Query: 295 QINREGVATAVLSIPIRYMHSQVELADARDVDNTIKLAKALLEELKPMDL 344
+ + GV T LS+P RY+HS E+ D RDVD T+KL LE + + +
Sbjct: 299 HLTKAGVPTGALSVPARYIHSNAEVVDERDVDATVKLMVKALENIHELKI 348
>sp|Q57975|Y555_METJA HYPOTHETICAL PROTEIN MJ0555 >gi|2127881|pir||C64369 endoglucanase
homolog - Methanococcus jannaschii
>gi|1591260|gb|AAB98546.1| (U67504) endoglucanase (celM)
[Methanococcus jannaschii]
Length = 350
Score = 228 bits (576), Expect = 6e-59
Identities = 126/343 (36%), Positives = 209/343 (60%), Gaps = 13/343 (3%)
Query: 7 MQEIIEAPGVSGYEFLGIRDLVVDLLKEVADEVKVDKLGNVIAHFKGSSPRVMVSAHMDK 66
++++ + G+SG E +R+ + L++ D V++D GN+IA ++M++AHMD+
Sbjct: 7 LKKLSKLHGISGRED-SVREFMKKELEKYCDSVEIDNFGNLIAKRGNKGKKIMIAAHMDE 65
Query: 67 IGVMVNHIDNNGYLHIVPIGGVLPETLVAQRIRFFTEKGERYGVVGVLPPHLRRGQQDKG 126
IG+MV +ID+NG+L IGG+ T++ Q++ KG+ GV+G PPH R +++K
Sbjct: 66 IGLMVKYIDDNGFLKFTKIGGIYDPTILNQKVVVHGSKGDLIGVLGSKPPH-RMKEEEKT 124
Query: 127 GKIDWDQIVVDVGASNKEEAEEMGFKVGTVGEFAPNFTRLSEHRFATPYLDDRICLYAMI 186
I ++ + +D+GA ++EEA EMG +GT F L ++R DDR+ ++
Sbjct: 125 KIIKYEDMFIDIGAESREEAIEMGVNIGTWVSFLSEVYDLGKNRLTGKAFDDRVGCAVLL 184
Query: 187 EAARQLGEHEAD--VYIVASVQEEVGLRGARVASYAIDPEIGIAMDVTFA-KQPHDKGKI 243
E ++L E + D VY V +VQEEVGL+GARV+++ I+P++ IA+DVT A P K +
Sbjct: 185 EVMKRLSEEDIDCQVYAVGTVQEEVGLKGARVSAFKINPDVAIALDVTIAGDHPGIKKED 244
Query: 244 VP-ELGKGPVMDV------GPNINPKLRAFADEVAKKYEIPLQVEPSPRPTGTDANVMQI 296
P +LGKGPV+ + G +PK+ V++KY+I +Q E T TDA + +
Sbjct: 245 APVDLGKGPVVGIVDASGRGLIAHPKVLDMIKAVSEKYKIDVQWEVGEGGT-TDATAIHL 303
Query: 297 NREGVATAVLSIPIRYMHSQVELADARDVDNTIKLAKALLEEL 339
REG+ T V+S+P RY+H+ VE+ D RD++ T++L ++E+
Sbjct: 304 TREGIPTGVISVPARYIHTPVEVIDKRDLEKTVELVYNCIKEV 346
>pir||A69157 endo-1,4-beta-glucanase - Methanobacterium thermoautotrophicum
(strain Delta H) >gi|2621502|gb|AAB84943.1| (AE000827)
endo-1,4-beta-glucanase [Methanobacterium
thermoautotrophicum]
Length = 343
Score = 210 bits (530), Expect = 2e-53
Identities = 123/343 (35%), Positives = 205/343 (58%), Gaps = 13/343 (3%)
Query: 5 KLMQEIIEAPGVSGYEFLGIRDLVVDLLKEVADEVKVDKLGNVIAHFKGSSPRVMVSAHM 64
+LM+ + A G+SG+E +RD++ L+ DE++ D LGN+IA +GS P +M++AHM
Sbjct: 6 ELMKRLSVASGISGFEG-EVRDIIRSELEGHVDEIEEDSLGNIIAVKRGSGPSIMLAAHM 64
Query: 65 DKIGVMVNHIDNNGYLHIVPIGGVLPETLVAQRIRFFTEKGERYGVVGVLPPHLRRGQQD 124
D+IG+MV HID G++ IGG+ + ++ Q + E G GV+G PPH + +
Sbjct: 65 DEIGLMVRHIDKKGFIRFSKIGGISDQMILNQAVWIHGENGPVMGVIGSKPPHRMKASER 124
Query: 125 KGGKIDWDQIVVDVGASNKEEAEEMGFKVGTVGEFAPNFTRLSEHRFATPYLDDRICLYA 184
K D + +D+GAS++E+AEE+ VG F ++ L+ RF LD+RI
Sbjct: 125 K-KVTTHDNMFIDIGASSREDAEEL-VAVGDPITFHAPYSELANSRFTGKALDNRIGCLV 182
Query: 185 MIEAARQLGEHEADVYIVASVQEEVGLRGARVASYAIDPEIGIAMDVTFA-KQPHDKGKI 243
M+E +++ E A VY V +VQEEVGL+GA+ +++ ++P++ +A+DVT A P K +
Sbjct: 183 MVEVLKRV-ETGATVYGVGTVQEEVGLKGAKTSAFRLNPDMTLALDVTIAGDHPGMKEEE 241
Query: 244 VP-ELGKGPVMDV------GPNINPKLRAFADEVAKKYEIPLQVEPSPRPTGTDANVMQI 296
P +L GP + + G +P+++ + E A++ +IP+Q+E S T TDA + +
Sbjct: 242 APAKLEGGPAIILTDASGRGIITHPRVKDWLLETAREEDIPVQIEVSEGGT-TDATAIHL 300
Query: 297 NREGVATAVLSIPIRYMHSQVELADARDVDNTIKLAKALLEEL 339
REG+ V+S+P RY+H+ V +A +D++ T+ L +E L
Sbjct: 301 TREGIPAGVVSVPTRYIHTTVSMASMKDIEMTVDLLVKAIERL 343
>gi|11499384 endoglucanase (celM) [Archaeoglobus fulgidus]
>gi|7435574|pir||B69474 endoglucanase (celM) homolog -
Archaeoglobus fulgidus >gi|2648753|gb|AAB89455.1|
(AE000979) endoglucanase (celM) [Archaeoglobus fulgidus]
Length = 304
Score = 201 bits (505), Expect = 1e-50
Identities = 114/305 (37%), Positives = 178/305 (57%), Gaps = 12/305 (3%)
Query: 44 LGNVIAHFKGSSPRVMVSAHMDKIGVMVNHIDNNGYLHIVPIGGVLPETLVAQRIRFFTE 103
+GN+I G P +MV+AHMD+IG V +ID+ G++ I PIGG + +AQR+ + +
Sbjct: 1 MGNLICTKNGGEPEIMVAAHMDEIGFAVKYIDDKGFIRIAPIGGWFSQIALAQRVVLYGK 60
Query: 104 KGERYGVVGVLPPHLRRGQQDKGGKIDWDQIVVDVGASNKEEAEEMGFKVGTVGEFAPNF 163
K + YGV+G PPHL + ++ K G I+ + VD+GAS+KEE EMG VGT
Sbjct: 61 K-KVYGVIGCKPPHLMKDEERKKG-IEIKDMFVDIGASSKEEVLEMGINVGTPVALDREI 118
Query: 164 TRLSEHRFATPYLDDRICLYAMIEAARQLGEHEADVYIVASVQEEVGLRGARVASYAIDP 223
L+ R D+R+ + MIEA R+ + + ++ VA+VQEEVGL+GAR +++AI+P
Sbjct: 119 VELANGRITGKAFDNRVGVAVMIEAVRR-AKADITIHAVATVQEEVGLKGARTSAFAIEP 177
Query: 224 EIGIAMDVTFAKQ--PHDKGKIVPELGKGPVMDV------GPNINPKLRAFADEVAKKYE 275
IA+D A + + +LGKG + V G +PK+ + E A+KY
Sbjct: 178 TAAIAVDTCVAADFPGSESAHMDVKLGKGAAITVIDASGRGLIASPKVLRWLTETAEKYG 237
Query: 276 IPLQVEPSPRPTGTDANVMQINREGVATAVLSIPIRYMHSQVELADARDVDNTIKLAKAL 335
IP Q+E + T TDA + + + G+ V+S+P RY+HS VE+ D +DV++ +++
Sbjct: 238 IPYQLEVAEGGT-TDATAIHLTKAGIPAGVVSVPARYIHSPVEVVDLKDVESAVEIVARA 296
Query: 336 LEELK 340
+E K
Sbjct: 297 IENAK 301
>prf||2113327A endoglucanase [Clostridium thermocellum]
Length = 325
Score = 189 bits (474), Expect = 6e-47
Identities = 116/329 (35%), Positives = 189/329 (57%), Gaps = 16/329 (4%)
Query: 6 LMQEIIEAPGVSGYEFLGIRDLVVDLLKEVADEVKVDKLGNVIAHFKGSSPRVMVSAHMD 65
L+++ GVSG E IR+ +++ +KE DE+KVD LGN+IA KG ++MV+AHMD
Sbjct: 4 LLKKFTGIVGVSGNEE-EIREAIIEEIKECVDEIKVDTLGNLIAVKKGKGKKIMVAAHMD 62
Query: 66 KIGVMVNHIDNNGYLHIVPIGGVLPETLVAQRIRFFTEKGERYGVVGVLPPHLRRGQQDK 125
+IGVMV +ID+ G+L +GGV + QR++F + GVVG + + +D
Sbjct: 63 EIGVMVTYIDDKGFLRFSAVGGVSRYDCIGQRVKF------KNGVVGAV--YYEEKLEDM 114
Query: 126 GGKIDWDQIVVDVGASNKEEAEEMGFKVGTVGEFAPNFTRLSEHRFATPYLDDRICLYAM 185
+ ++ +D+GA ++EEA +M +G V F + L + LD+R +
Sbjct: 115 -KNLQLSKMYIDIGARSREEALKM-VNIGDVACFVGDAV-LQGDTVISKALDNRSGCAVV 171
Query: 186 IEAARQLGEHEADVYIVASVQEEVGLRGARVASYAIDPEIGIAMDVTFAKQPHDKGKIVP 245
++A ++L + + ++Y V +VQEEVGLRGA+ A+++I P+I IA+DVT + +
Sbjct: 172 VKAIKELKKTDNEIYFVFTVQEEVGLRGAKTAAFSIKPDIAIAVDVTMTGDTPESHPMEV 231
Query: 246 ELGKGP---VMDVGPNINPKLRAFADEVAKKYEIPLQVEPSPRPTGTDANVMQINREGVA 302
+ G GP V D +P++R +E AK+ IP Q+E G+D + + G+
Sbjct: 232 KCGGGPAIKVKDRSVICHPEVRKLLEESAKRNNIPYQLE-ILEAGGSDPGSIHLTAGGIP 290
Query: 303 TAVLSIPIRYMHSQVELADARDVDNTIKL 331
+ +SIP+RY+HS VE A D++N +KL
Sbjct: 291 SGAISIPVRYVHSPVETASMSDINNAVKL 319
>sp|P55742|GUNM_CLOTM ENDOGLUCANASE M (EGM) (ENDO-1,4-BETA-GLUCANASE) (CELLULASE M)
Length = 330
Score = 189 bits (474), Expect = 6e-47
Identities = 116/329 (35%), Positives = 189/329 (57%), Gaps = 16/329 (4%)
Query: 6 LMQEIIEAPGVSGYEFLGIRDLVVDLLKEVADEVKVDKLGNVIAHFKGSSPRVMVSAHMD 65
L+++ GVSG E IR+ +++ +KE DE+KVD LGN+IA KG ++MV+AHMD
Sbjct: 9 LLKKFTGIVGVSGNEE-EIREAIIEEIKECVDEIKVDTLGNLIAVKKGKGKKIMVAAHMD 67
Query: 66 KIGVMVNHIDNNGYLHIVPIGGVLPETLVAQRIRFFTEKGERYGVVGVLPPHLRRGQQDK 125
+IGVMV +ID+ G+L +GGV + QR++F + GVVG + + +D
Sbjct: 68 EIGVMVTYIDDKGFLRFSAVGGVSRYDCIGQRVKF------KNGVVGAV--YYEEKLEDM 119
Query: 126 GGKIDWDQIVVDVGASNKEEAEEMGFKVGTVGEFAPNFTRLSEHRFATPYLDDRICLYAM 185
+ ++ +D+GA ++EEA +M +G V F + L + LD+R +
Sbjct: 120 -KNLQLSKMYIDIGARSREEALKM-VNIGDVACFVGDAV-LQGDTVISKALDNRSGCAVV 176
Query: 186 IEAARQLGEHEADVYIVASVQEEVGLRGARVASYAIDPEIGIAMDVTFAKQPHDKGKIVP 245
++A ++L + + ++Y V +VQEEVGLRGA+ A+++I P+I IA+DVT + +
Sbjct: 177 VKAIKELKKTDNEIYFVFTVQEEVGLRGAKTAAFSIKPDIAIAVDVTMTGDTPESHPMEV 236
Query: 246 ELGKGP---VMDVGPNINPKLRAFADEVAKKYEIPLQVEPSPRPTGTDANVMQINREGVA 302
+ G GP V D +P++R +E AK+ IP Q+E G+D + + G+
Sbjct: 237 KCGGGPAIKVKDRSVICHPEVRKLLEESAKRNNIPYQLE-ILEAGGSDPGSIHLTAGGIP 295
Query: 303 TAVLSIPIRYMHSQVELADARDVDNTIKL 331
+ +SIP+RY+HS VE A D++N +KL
Sbjct: 296 SGAISIPVRYVHSPVETASMSDINNAVKL 324
>gb|AAD47606.1|AF146565_2 (AF146565) endoglucanase [Methanococcus maripaludis]
Length = 321
Score = 189 bits (474), Expect = 6e-47
Identities = 107/310 (34%), Positives = 179/310 (57%), Gaps = 13/310 (4%)
Query: 15 GVSGYEFLGIRDLVVDLLKEVADEVKVDKLGNVIAHFKGSSPRVMVSAHMDKIGVMVNHI 74
G+SG E IR+ + L++ D ++ DK GN+IA + P++M+++HMD+IG+MV +I
Sbjct: 15 GISGRED-NIREYMKKELEKYCDSIETDKFGNLIAKKGSTGPKIMIASHMDEIGLMVKYI 73
Query: 75 DNNGYLHIVPIGGVLPETLVAQRIRFFTEKGERYGVVGVLPPHLRRGQQDKGGKIDWDQI 134
D+ G+L IGG+ + L+ Q++ G+ GV+G PPH + + ++ I + +
Sbjct: 74 DDKGFLKFTKIGGINDQMLLNQKVIVHGNNGDIVGVLGSKPPH-KMKESERNKLISAEHM 132
Query: 135 VVDVGASNKEEAEEMGFKVGTVGEFAPNFTRLSEHRFATPYLDDRICLYAMIEAARQLGE 194
+D+GA N+EEAE+MG ++GT F F +L + + D+R +++ L +
Sbjct: 133 FIDIGAKNREEAEKMGVEIGTAMSFKSEFDKLGGNVVSCKSFDNRAGCAVVLKTMELLKD 192
Query: 195 HE--ADVYIVASVQEEVGLRGARVASYAIDPEIGIAMDVTF-AKQPHDKGKIVP-ELGKG 250
+ VY V +VQEEVG++GA+ +++ I+P++ A+DVT P K + P ELGKG
Sbjct: 193 MDLKCQVYAVGTVQEEVGVKGAKTSAFGINPDVAFALDVTICGDHPGIKLEDAPVELGKG 252
Query: 251 PVMDV------GPNINPKLRAFADEVAKKYEIPLQVEPSPRPTGTDANVMQINREGVATA 304
PV + G +P + +V+K EIP+Q E T TDA + + R+G+ T
Sbjct: 253 PVATIVDASGRGIITHPTVLRMVRDVSKADEIPVQYEVGEGGT-TDATAIHLTRDGIPTG 311
Query: 305 VLSIPIRYMH 314
V+S+P RY+H
Sbjct: 312 VISVPSRYIH 321
>pir||B72301 endoglucanase - Thermotoga maritima (strain MSB8)
>gi|4981590|gb|AAD36125.1|AE001765_4 (AE001765)
endoglucanase [Thermotoga maritima]
Length = 334
Score = 185 bits (466), Expect = 5e-46
Identities = 112/339 (33%), Positives = 187/339 (55%), Gaps = 15/339 (4%)
Query: 5 KLMQEIIEAPGVSGYEFLGIRDLVVDLLKEVADEVKVDKLGNVIAHFKGSS-PRVMVSAH 63
KL+ E+ G SGYE + + +++ DE K + G++I + KG ++ AH
Sbjct: 7 KLLMELSNLDGPSGYE-TNVVSYIKSVIEPFVDEAKTTRHGSLIGYKKGKGIGKLAFFAH 65
Query: 64 MDKIGVMVNHIDNNGYLHIVPIGGVLPETLVAQRIRFFTEKGERYGVVGVLPPHLRRGQQ 123
+D+IG +V+ ++ + + P+GGV P+ + A ++R +T+ G GV+G+L PHL+ +
Sbjct: 66 VDEIGFVVSKVEGQ-FARLEPVGGVDPKVVYASKVRIYTKNGIERGVIGMLAPHLQDSES 124
Query: 124 DKGGKIDWDQIVVDVGASNKEEAEEMGFKVGTVGEFAPNFTRLSEHRFATPYLDDRICLY 183
K + +D+I VD+ ++ +VG + + + LD+R
Sbjct: 125 RKK-VLTYDEIFVDLSLCERD------VRVGDIAVIDQTAFE-TNGKVVGKALDNRASCG 176
Query: 184 AMIEAARQLG--EHEADVYIVASVQEEVGLRGARVASYAIDPEIGIAMDVTFAKQPHDKG 241
+++ L +H DVY+V SVQEE G GA +Y I+P+ I MDVTFA +P
Sbjct: 177 VLVKVLEFLKRYDHPWDVYVVFSVQEETGCLGALTGAYEINPDAAIVMDVTFASEPPFSD 236
Query: 242 KIVPELGKGPVMDVGPNINPKLRAFADEVAKKYEIPLQVEPSPRPTGTDANVMQINREGV 301
I ELGKGPV+ +GP ++ L E+AKK+ + LQ E +GT+ + +Q+ R GV
Sbjct: 237 HI--ELGKGPVIGLGPVVDRNLVQKIIEIAKKHNVSLQEEAVGGRSGTETDFVQLVRNGV 294
Query: 302 ATAVLSIPIRYMHSQVELADARDVDNTIKLAKALLEELK 340
T+++SIP++YMH+ VE+ D RDV+ +L + EL+
Sbjct: 295 RTSLISIPLKYMHTPVEMVDPRDVEELARLLSLVAVELE 333
>pir||E75067 aminopeptidase m42 PAB2375 [imported] - Pyrococcus abyssi (strain
Orsay) >gi|5458947|emb|CAB50434.1| (AJ248287)
aminopeptidase from family M42 [Pyrococcus abyssi]
Length = 331
Score = 183 bits (459), Expect = 3e-45
Identities = 125/340 (36%), Positives = 190/340 (55%), Gaps = 22/340 (6%)
Query: 7 MQEIIEAPGVSGYEFLGIRDLVVDLLKEVADEVKVDKLGNVIAHFKGSSPRVMVSAHMDK 66
++E + PG+SGYE IR+ +++ +K+ AD KVD +GN+I R++ AHMD+
Sbjct: 7 LKEFTQIPGISGYEER-IRERIIEEIKDFAD-YKVDAIGNLIVELGEGDERLLFMAHMDE 64
Query: 67 IGVMVNHIDNNGYLHIVPIGGVLPETLVAQRIRFFTEKGERYGVVGVLPPHLRRGQQDKG 126
IG+++ I N+G L +GG+ L + + TE GV+G +PPHL G+
Sbjct: 65 IGLLITGITNDGKLRFRKVGGIDDRLLYGRHVSVVTEDKIIDGVIGAIPPHLSLGK---- 120
Query: 127 GK--IDWDQIVVDVGASNKEEAEEMGFKVGTVGEFAPNFTRLSEHRFATPYLDDRICLYA 184
GK I W ++V+D+GA +KEEA E+ K F +F+ L+ +T LDDR + A
Sbjct: 121 GKDVIPWHELVIDIGAESKEEALEL-VKPLDFAVFKKHFSVLNGRYVSTRSLDDRFGVVA 179
Query: 185 MIEAARQLGEHE--ADVYIVASVQEEVGLRGARVASYAIDPEIGIAMDVTFAKQPHDKGK 242
+IEA + L +H+ V +VQEE+GL+GAR + PE A+D +FA G
Sbjct: 180 LIEAIKDLVDHDLGGKVVFAFTVQEEIGLKGARFLANRYAPEYAFAID-SFACCNELTGD 238
Query: 243 IVPELGKGPVMDVGPNINPKLRAFADEV---AKKYEIPLQVEPSPRPTGTDANVMQINRE 299
+ +LG GPV+ N R A +V A+K +IP+Q+ GTDA+V Q E
Sbjct: 239 V--KLGGGPVIRAVDNSAIYSRDLARKVLSIAEKNKIPIQI--GVTGGGTDASVFQ---E 291
Query: 300 GVATAVLSIPIRYMHSQVELADARDVDNTIKLAKALLEEL 339
LS+PI+Y+HS+VE+ D++N IKL +A+ EL
Sbjct: 292 RCKALALSVPIKYLHSEVEMLQINDLENLIKLIEAIALEL 331
>dbj|BAB06851.1| (AP001517) endo-1,4-beta-glucanase [Bacillus halodurans]
Length = 361
Score = 178 bits (446), Expect = 1e-43
Identities = 113/349 (32%), Positives = 191/349 (54%), Gaps = 16/349 (4%)
Query: 5 KLMQEIIEAPGVSGYEFLGIRDLVVDLLKEVADEVKVDKLGNVIAHFKGSS--PRVMVSA 62
++++E+ +A G+ G E RD++ ++ ADEV DKLG+++A G P++MV+
Sbjct: 9 QMLKELTDANGIPGNE-REARDVMRKHIEPFADEVTTDKLGSLVAKKVGKEDGPKIMVAG 67
Query: 63 HMDKIGVMVNHIDNNGYLHIVPIGGVLPETLVAQRIRFFTEKGERYGVVGVLPPHLRRGQ 122
H+D+IG MV ID+ G+L +GG + ++AQR+ T+KG GV+G PPH+ +
Sbjct: 68 HLDEIGFMVTSIDDKGFLRFQTVGGWWEQVMLAQRVTVMTKKGNIPGVIGSKPPHILPAE 127
Query: 123 QDKGGKIDWDQIVVDVGASNKEEAEEMGFKVGTVGEFAPNFTRLSEHRF-ATPYLDDRIC 181
K +D + +D+G ++KEEA E G + G +FT + ++ D+RI
Sbjct: 128 ARK-KPVDKKDMFIDIGVASKEEALEFGVRPGDSIVPVCDFTVMKNEKYLMAKAWDNRIG 186
Query: 182 LYAMIEAARQL--GEHEADVYIVASVQEEVGLRGARVASYAIDPEIGIAMDVTFAKQPH- 238
I+ R+L H VY V +VQEEVGLRGAR +++ I P+IG +DV A
Sbjct: 187 CAIAIDVLRELKGTNHPNVVYGVGTVQEEVGLRGARTSAHYIKPDIGFGVDVGIAGDTPG 246
Query: 239 -DKGKIVPELGKGP---VMDVGPNINPKLRAFADEVAKKYEIPLQVEPSPRPTGTDANVM 294
+ + + ++G+GP + D + LR F ++A ++ IP Q + + GTD+ +
Sbjct: 247 VTEKEALAKMGEGPQIVLYDASMVSHKGLRDFVTDIADEHNIPYQFD-AMAGGGTDSGAI 305
Query: 295 QINREGVATAVLSIPIRYMHSQVELADARDVDNTIKLAKALLEELKPMD 343
+ GV +++ RY+HS + D +NT+KL ++E +K +D
Sbjct: 306 HLTANGVPALSITVATRYIHSHASILHRDDYENTVKL---IVEVIKKLD 351
>pir||B71165 hypothetical protein PH0519 - Pyrococcus horikoshii
>gi|3256924|dbj|BAA29607.1| (AP000002) 332aa long
hypothetical protein [Pyrococcus horikoshii]
Length = 332
Score = 172 bits (432), Expect = 5e-42
Identities = 122/338 (36%), Positives = 186/338 (54%), Gaps = 18/338 (5%)
Query: 7 MQEIIEAPGVSGYEFLGIRDLVVDLLKEVADEVKVDKLGNVIAHFKGSSPRVMVSAHMDK 66
+++ + PG+SGYE IR+ ++ +K+ AD KVD +GN+I R++ AHMD+
Sbjct: 8 LKKFTQIPGISGYEER-IREEIIREIKDFAD-YKVDAIGNLIVELGEGEERILFMAHMDE 65
Query: 67 IGVMVNHIDNNGYLHIVPIGGVLPETLVAQRIRFFTEKGERYGVVGVLPPHLRRGQQDKG 126
IG+++ I + G L +GG+ L + + TEKG GV+G PPHL ++DK
Sbjct: 66 IGLLITGITDEGKLRFRKVGGIDDRLLYGRHVNVVTEKGILDGVIGATPPHLSL-ERDK- 123
Query: 127 GKIDWDQIVVDVGASNKEEAEEMGFKVGTVGEFAPNFTRLSEHRFATPYLDDRICLYAMI 186
I W +V+D+GA +KEEA E+ K F +F+ L+ +T LDDR + A+I
Sbjct: 124 SVIPWYDLVIDIGAESKEEALEL-VKPLDFAVFKKHFSVLNGKYVSTRGLDDRFGVVALI 182
Query: 187 EAARQLGEHEAD--VYIVASVQEEVGLRGARVASYAIDPEIGIAMDVTFAKQPHDKGKIV 244
EA + L +HE + V +VQEEVGL+GA+ + P+ A+D +FA G +
Sbjct: 183 EAIKDLVDHELEGKVIFAFTVQEEVGLKGAKFLANHYYPQYAFAID-SFACCSPLTGDV- 240
Query: 245 PELGKGPVMDVGPNINPKLRAFADEV---AKKYEIPLQVEPSPRPTGTDANVMQINREGV 301
+LGKGPV+ N R A +V A+K I +Q+ GTDA+ Q +
Sbjct: 241 -KLGKGPVIRAVDNSAIYSRDLARKVWSIAEKNGIEIQI--GVTGGGTDASAFQ---DRS 294
Query: 302 ATAVLSIPIRYMHSQVELADARDVDNTIKLAKALLEEL 339
T LS+PI+Y+HS+VE D++ +KL +AL EL
Sbjct: 295 KTLALSVPIKYLHSEVETLHLNDLEKLVKLIEALAFEL 332
>pir||D72301 endoglucanase - Thermotoga maritima (strain MSB8)
>gi|4981592|gb|AAD36127.1|AE001765_6 (AE001765)
endoglucanase [Thermotoga maritima]
Length = 331
Score = 168 bits (420), Expect = 1e-40
Identities = 114/331 (34%), Positives = 191/331 (57%), Gaps = 13/331 (3%)
Query: 5 KLMQEIIEAPGVSGYEFLGIRDLVVDLLKEVADEVKVDKLGNVIAHFKGSSPRVMVSAHM 64
+L++++ EA G SG E +R ++++ L+ D ++D LGN+I +V++ AH+
Sbjct: 3 ELIRKLTEAFGPSGREE-EVRSIILEELEGHIDGHRIDGLGNLIVWKGSGEKKVILDAHI 61
Query: 65 DKIGVMVNHIDNNGYLHIVPIGGVLPETLVAQRIRFFTEKGERYGVVGVLPPHLRRGQQD 124
D+IGV+V ++D+ G+L I P+GGV P L+ +RIRF E G GVVG + +Q+
Sbjct: 62 DEIGVVVTNVDDKGFLTIEPVGGVSPYMLLGKRIRF--ENG-TIGVVG-MEGETTEERQE 117
Query: 125 KGGKIDWDQIVVDVGASNKEEAEEMGFKVGTVGEFAPNFTRLSEHRFATPYLDDRICLYA 184
K+ +D++ +D+GA+++EEA++M +G+ G + F +S ++ + +DDRI
Sbjct: 118 NVRKLSFDKLFIDIGANSREEAQKM-CPIGSFGVYDSGFVEVS-GKYVSKAMDDRIGCAV 175
Query: 185 MIEAARQLGEHEADVYIVASVQEEVGLRGARVASYAIDPEIGIAMDVT-FAKQPHDKGKI 243
++E +++ + +Y V SVQEEVGL GA VA Y + + IA+DVT A P +
Sbjct: 176 IVEVFKRI-KPAVTLYGVFSVQEEVGLVGASVAGYGVPADEAIAIDVTDSADTPKAIKRH 234
Query: 244 VPELGKGPVMDVGPNINPKLRAFAD---EVAKKYEIPLQVEPSPRPTGTDANVMQINREG 300
L GP + V + + + E+A+K++I Q+E GT+A Q REG
Sbjct: 235 AMRLSGGPALKVKDRASISSKRILENLIEIAEKFDIKYQMEVLTF-GGTNAMGYQRTREG 293
Query: 301 VATAVLSIPIRYMHSQVELADARDVDNTIKL 331
+ +A +SIP RY+HS E+ DV+ T+ L
Sbjct: 294 IPSATVSIPTRYVHSPSEMIAPDDVEATVDL 324
>pir||A72609 probable deblocking aminopeptidase APE1335 - Aeropyrum pernix
(strain K1) >gi|5105013|dbj|BAA80327.1| (AP000061) 339aa
long hypothetical deblocking aminopeptidase [Aeropyrum
pernix]
Length = 339
Score = 166 bits (415), Expect = 5e-40
Identities = 105/337 (31%), Positives = 180/337 (53%), Gaps = 15/337 (4%)
Query: 7 MQEIIEAPGVSGYEFLGIRDLVVDLLKEVADEVKVDKLGNVIAHFKGSSPRVMVSAHMDK 66
++E++ PG SG+E L +R +VV L+E+ + VD+LGNV+ + G PR++ +AHMD+
Sbjct: 5 LRELVFTPGPSGFEDL-VRSVVVSRLRELGLDPVVDELGNVVVNPSGGEPRLLAAAHMDE 63
Query: 67 IGVMVNHIDNNGYLHIVPIGGVLPETLVAQRIRFFTEKGERY-GVVGVLPPHLRRGQQDK 125
+G ++ + ++G L +GG+ L Q + + G R GV+G+ PPHL+ + +
Sbjct: 64 LGFVITGVGDDGLLAFRKLGGIDDRILPGQHVEILLDGGARIEGVIGITPPHLQLDRGEA 123
Query: 126 GGKIDWDQIVVDVGASNKEEAEEMGFKVGTVGEFAPNFTRLSEHR-FATPYLDDRICLYA 184
+ W ++ +D+GA ++ EAEE+G K F +++ L+ R A+ DDR +
Sbjct: 124 EKPLRWHELRIDIGAQSRAEAEELGVKPLQPAVFKKHWSTLAGGRALASRGFDDRAGVAL 183
Query: 185 MIEAARQLGEHEAD---VYIVASVQEEVGLRGARVASYAIDPEIGIAMDVTFAKQPHDKG 241
++E A+++ E D + + +VQEEVGLRGA + + P+ +A+D P G
Sbjct: 184 LLELAKRIAEGRVDAGGIALAWTVQEEVGLRGASYVASRMKPKAFLAVDTMACCHPAVTG 243
Query: 242 KIVPELGKGPVMDVGPN--INPK-LRAFADEVAKKYEIPLQVEPSPRPTGTDANVMQINR 298
P G GPV+ N I P+ L +E A+ + LQ + G + R
Sbjct: 244 HTRP--GGGPVVRALDNQHITPRWLVELLEEAARSAGLELQYATA----GGTTDAAAFQR 297
Query: 299 EGVATAVLSIPIRYMHSQVELADARDVDNTIKLAKAL 335
GV +A + IP++Y HS E+ D++ +KL + L
Sbjct: 298 TGVPSAAIGIPLKYTHSTAEVLYLSDLEGALKLLEHL 334
>sp|P32153|FRVX_ECOLI PUTATIVE FRV OPERON PROTEIN FRVX >gi|541108|pir||S40842 probable
frv operon protein FrvX - Escherichia coli
>gi|305002|gb|AAB03031.1| (L19201) ORF_f356 [Escherichia
coli] >gi|1790332|gb|AAC76880.1| (AE000465) frv operon
protein [Escherichia coli K12]
Length = 356
Score = 165 bits (413), Expect = 8e-40
Identities = 110/342 (32%), Positives = 175/342 (51%), Gaps = 11/342 (3%)
Query: 5 KLMQEIIEAPGVSGYEFLGIRDLVVDLLKEVADEVKVDKLGNVIAHFKGSSPRVMVSAHM 64
+L+Q++ EA VSG E +RD++++ L+ +E+ D LG+ +A P+V V HM
Sbjct: 4 ELLQQLCEASAVSGDE-QEVRDILINTLEPCVNEITFDGLGSFVARKGNKGPKVAVVGHM 62
Query: 65 DKIGVMVNHIDNNGYLHIVPIGGVLPETLVAQRIRFFTEKGERY-GVVGVLPPHLRRGQQ 123
D++G MV HID +G+L IGG ++++ R+ T KG + GV+G + PH +Q
Sbjct: 63 DEVGFMVTHIDESGFLRFTTIGGWWNQSMLNHRVTIRTHKGVKIPGVIGSVAPHALTEKQ 122
Query: 124 DKGGKIDWDQIVVDVGASNKEEAEEMGFKVGTVGEFAPNFTRLSEHRFATPYLDDRICLY 183
K + +D++ +D+GA+++EE E+ G ++G NF E + LD+RI
Sbjct: 123 -KQQPLSFDEMFIDIGANSREEVEKRGVEIGNFISPEANFACWGEDKVVGKALDNRIGCA 181
Query: 184 AMIEAARQLGEHEADVYIVASVQEEVGLRGARVASYAIDPEIGIAMDVTFAKQPH--DKG 241
M E + + E +Y V SV+EEVGLRGA+ ++ I P++ I +D A D
Sbjct: 182 MMAELLQTVNNPEITLYGVGSVEEEVGLRGAQTSAEHIKPDVVIVLDTAVAGDVPGIDNI 241
Query: 242 KIVPELGKGP---VMDVGPNINPKLRAFADEVAKKYEIPLQVEPSPRPTG-TDANVMQIN 297
K +LG+GP + D N KL A A ++PLQ S TG TD +
Sbjct: 242 KYPLKLGQGPGLMLFDKRYFPNQKLVAALKSCAAHNDLPLQF--STMKTGATDGGRYNVM 299
Query: 298 REGVATAVLSIPIRYMHSQVELADARDVDNTIKLAKALLEEL 339
G L +P RY+H+ + D + + L + L L
Sbjct: 300 GGGRPVVALCLPTRYLHANSGMISKADYEALLTLIRGFLTTL 341
>pir||A69984 endo-1,4-beta-glucanase homolog ysdC - Bacillus subtilis
>gi|1770012|emb|CAA99585.1| (Z75208) hypothetical
protein [Bacillus subtilis] >gi|2635347|emb|CAB14842.1|
(Z99118) similar to endo-1,4-beta-glucanase [Bacillus
subtilis]
Length = 361
Score = 164 bits (412), Expect = 1e-39
Identities = 106/344 (30%), Positives = 184/344 (52%), Gaps = 13/344 (3%)
Query: 6 LMQEIIEAPGVSGYEFLGIRDLVVDLLKEVADEVKVDKLGNVIAHFKGSS--PRVMVSAH 63
+++++ +A G+ G E +R ++ ++ ADEV D+LG++IA G+ P++M++ H
Sbjct: 10 MLKDLTDAKGIPGNE-REVRQVMKSYIEPFADEVTTDRLGSLIAKKTGAENGPKIMIAGH 68
Query: 64 MDKIGVMVNHIDNNGYLHIVPIGGVLPETLVAQRIRFFTEKGERYGVVGVLPPHLRRGQQ 123
+D++G MV I + G++ +GG + ++AQR+ T+KGE GV+G PPH+ +
Sbjct: 69 LDEVGFMVTQITDKGFIRFQTVGGWWAQVMLAQRVTIVTKKGEITGVIGSKPPHILSPEA 128
Query: 124 DKGGKIDWDQIVVDVGASNKEEAEEMGFKVGTVGEFAPNFTRLSEHRF-ATPYLDDRICL 182
K ++ + +D+GAS++EEA E G G + FT ++ +F D+RI
Sbjct: 129 RK-KSVEIKDMFIDIGASSREEALEWGVLPGDMIVPHFEFTVMNNEKFLLAKAWDNRIGC 187
Query: 183 YAMIEAARQL--GEHEADVYIVASVQEEVGLRGARVASYAIDPEIGIAMDVTFAKQPH-- 238
I+ R L +H VY V +VQEEVGLRGA+ A++ I P+I +DV A
Sbjct: 188 AIAIDVLRNLQNTDHPNIVYGVGTVQEEVGLRGAKTAAHTIQPDIAFGVDVGIAGDTPGI 247
Query: 239 DKGKIVPELGKGP---VMDVGPNINPKLRAFADEVAKKYEIPLQVEPSPRPTGTDANVMQ 295
+ + ++GKGP V D + LR A++ IP Q + + GTD+ +
Sbjct: 248 SEKEAQSKMGKGPQIIVYDASMVSHKGLRDAVVATAEEAGIPYQFD-AIAGGGTDSGAIH 306
Query: 296 INREGVATAVLSIPIRYMHSQVELADARDVDNTIKLAKALLEEL 339
+ GV ++I RY+H+ + D +N +KL ++++L
Sbjct: 307 LTANGVPALSITIATRYIHTHAAMLHRDDYENAVKLITEVIKKL 350
>pir||E75542 probable endoglucanase - Deinococcus radiodurans (strain R1)
>gi|6457903|gb|AAF09817.1|AE001885_1 (AE001885)
endoglucanase, putative [Deinococcus radiodurans]
Length = 375
Score = 164 bits (411), Expect = 1e-39
Identities = 115/319 (36%), Positives = 173/319 (54%), Gaps = 18/319 (5%)
Query: 33 KEVADEVKV--DKLGNVIAHF-KGSSPRVMVSAHMDKIGVMVNHIDNNGYLHIVPIGGVL 89
KE A +V D G+V A + P + + H+D+IG++V+H+D+ G+L ++ +GG
Sbjct: 57 KEAATFARVSEDHYGSVYAELGPENGPAIALMGHLDEIGLIVSHVDDKGHLSVLGVGGWD 116
Query: 90 PETLVAQRIRFFTEKGERYGVVGVLPPHLRRGQQ-DKGGKIDWDQIVVDVGASNKEEAEE 148
P+ LV QRIR G+ GVVG H+ ++ K K++ + +DVG +A+E
Sbjct: 117 PQVLVGQRIRLLAPGGDLLGVVGKKAIHVMEAEERTKASKLE--DLWIDVGL----DADE 170
Query: 149 MGFKV--GTVGEFAPNFTRLSEHRFATPYLDDRICLYAMIEAARQLGEHEADVYIVA--S 204
+ KV GT G + ++ + LD+R+ + ++EA R L + E IVA +
Sbjct: 171 VKAKVPVGTYGVIEQGPVMVG-NKVVSRALDNRVGAFIVLEALRALKDVELKHRIVAVGT 229
Query: 205 VQEEVGLRGARVASYAIDPEIGIAMDVTF-AKQP--HDKGKIVPELGKGPVMDVGPNINP 261
QEE+G+ GA+ ++Y +DP GIA+DVT QP +K V G G + VGP NP
Sbjct: 230 SQEEIGVFGAQTSAYRLDPVAGIAVDVTHETDQPGVSEKKYGVAPFGSGANLSVGPMTNP 289
Query: 262 KLRAFADEVAKKYEIPLQVEPSPRPTGTDANVMQINREGVATAVLSIPIRYMHSQVELAD 321
L E A + IP + S R TGTDA+ + + R GV T V+SIP RYMHS E+ D
Sbjct: 290 TLLRQLTEAAGRENIPYTLSASGRYTGTDADALTLVRAGVPTGVVSIPNRYMHSPSEMVD 349
Query: 322 ARDVDNTIKLAKALLEELK 340
RDV I + A + L+
Sbjct: 350 ERDVKACIDILAAWIRGLE 368
>pir||B69998 endo-1,4-beta-glucanase homolog ytoP - Bacillus subtilis
>gi|2293210|gb|AAC00288.1| (AF008220) YtoP [Bacillus
subtilis] >gi|2635470|emb|CAB14964.1| (Z99119) similar
to endo-1,4-beta-glucanase [Bacillus subtilis]
Length = 357
Score = 160 bits (401), Expect = 2e-38
Identities = 107/327 (32%), Positives = 175/327 (52%), Gaps = 12/327 (3%)
Query: 6 LMQEIIEAPGVSGYEFLGIRDLVVDLLKEVADEVKVDKLGNVIAHFKGS--SPRVMVSAH 63
L Q + + PG G E +R + L + AD++ D+LG+V +G+ +PR+MV+ H
Sbjct: 8 LFQTLTQLPGAPGNEHQ-VRAFMKQELAKYADDIVQDRLGSVFGVRRGAEDAPRIMVAGH 66
Query: 64 MDKIGVMVNHIDNNGYLHIVPIGGVLPETLVAQRIRFFTEKGERYGVVGVLPPHLRRGQQ 123
MD++G MV I +NG L +GG + L+AQR+ T+ G GV+ +PPHL Q
Sbjct: 67 MDEVGFMVTSITDNGLLRFQTLGGWWSQVLLAQRVEIQTDNGPVPGVISSIPPHLLTDAQ 126
Query: 124 DKGGKIDWDQIVVDVGASNKEEAEEMGFKVG-TVGEFAPNFTRLSEHRFATPYLDDRICL 182
+ +D +++D+GA +KE+A ++G + G + P T +E + + D+R
Sbjct: 127 -RNRPMDIKNMMIDIGADDKEDAIKIGIRPGQQIVPVCPFTTMANEKKILSKAWDNRYGC 185
Query: 183 YAMIEAARQLGEHEA--DVYIVASVQEEVGLRGARVASYAIDPEIGIAMDVTFAKQPHDK 240
IE ++L E +Y A+VQEEVGLRGA+ AS+ I P++ A+D + A
Sbjct: 186 GLSIELLKELHGKELPNTLYAGATVQEEVGLRGAQTASHMIKPDLFFALDASPANDMSGD 245
Query: 241 GKIVPELGKG---PVMDVGPNINPKLRAFADEVAKKYEIPLQVEPSPRPTGTDANVMQIN 297
+LGKG ++D ++ +R F ++A+ ++IP Q S GTDA + I+
Sbjct: 246 KNEFGQLGKGFLLRILDRTTVMHRGMREFVLDMAETHDIPYQYFVS--GGGTDAGKVHIS 303
Query: 298 REGVATAVLSIPIRYMHSQVELADARD 324
GV +AV+ I RY+H+ + D
Sbjct: 304 NSGVPSAVIGICSRYIHTNATIIHIDD 330
>sp|P39366|SGCX_ECOLI PUTATIVE SGC REGION PROTEIN SGCX >gi|7435572|pir||C65244
hypothetical 41.7 kD protein in fecI-fimB intergenic
region - Escherichia coli (strain K-12)
>gi|2367373|gb|AAC77261.1| (AE000501) putative
lyase/synthase [Escherichia coli K12]
Length = 383
Score = 151 bits (378), Expect = 1e-35
Identities = 103/342 (30%), Positives = 172/342 (50%), Gaps = 19/342 (5%)
Query: 10 IIEAPGVSGYEFLGIRDLVVDLLKEVADEVKVDKLGNVIAHFKGSSP---RVMVSAHMDK 66
+++ +SG+E + D+++ + A EV D+LGNV+A + P R+M+ AHMD+
Sbjct: 22 LLQHNAISGHEN-AVADVMLCEFRRQAKEVWRDRLGNVVARYGSDKPDALRLMIFAHMDE 80
Query: 67 IGVMVNHIDNNGYLHIVPIGGVLPETLVAQRIRFFTEKGERYGVVGVLPPHLRRGQQDKG 126
+G MV I+ +G+L +GG T+ + +KG G +G+ H +G ++
Sbjct: 81 VGFMVRKIEPSGFLRFERVGGPAQVTMAGSIVTLTGDKGPVMGCIGIKSYHFAKG-DERT 139
Query: 127 GKIDWDQIVVDVGASNKEEAEEMGFKVGTVGEFAPNFTRLSEHRFATPYLDDRICLYAMI 186
D++ +D+GA +K++A MG +VGT L+ + LDDR+ A++
Sbjct: 140 QSPSVDKLWIDIGAKDKDDAIRMGIQVGTPVTLYNPPQLLANDLVCSKALDDRLGCTALL 199
Query: 187 EAARQLGEHEAD--VYIVASVQEEVGLRGARVASYAIDPEIGIAMDVT---FAKQPHDKG 241
A + E D VY+VASVQEE +RG + P++ I +D+T HD
Sbjct: 200 GVADAISTMELDIAVYLVASVQEEFNIRGIVPVLRRVKPDLAIGIDITPSCDTPDLHDYS 259
Query: 242 KIVPELGKGPV--------MDVGPNINPKLRAFADEVAKKYEIPLQVEPSPRPTGTDANV 293
++ G G G P+L ++ A ++ IP+Q E +P T+
Sbjct: 260 EVRINQGVGITCLNYHGRGTLAGLITPPRLIRMLEQTALEHNIPVQREVAPGVI-TETGY 318
Query: 294 MQINREGVATAVLSIPIRYMHSQVELADARDVDNTIKLAKAL 335
+Q+ ++G+ A LSIP RY HS E+A RD+ + I+L AL
Sbjct: 319 IQVEQDGIPCASLSIPCRYTHSPAEVASLRDLTDCIRLLTAL 360
>dbj|BAB06976.1| (AP001518) endo-1,4-beta-glucanase [Bacillus halodurans]
Length = 357
Score = 151 bits (378), Expect = 1e-35
Identities = 110/342 (32%), Positives = 178/342 (51%), Gaps = 16/342 (4%)
Query: 6 LMQEIIEAPGVSGYEFLGIRDLVVDLLKEVADEVKVDKLGNVIAHFKGSS--PRVMVSAH 63
L + + E G G+E IR V L++ +E+ D+LG++ +G+ P+VMV+ H
Sbjct: 8 LFKTLTELQGAPGFEH-HIRRFVRGELEKYTNEIVQDRLGSIFGVKRGNEQGPKVMVAGH 66
Query: 64 MDKIGVMVNHIDNNGYLHIVPIGGVLPETLVAQRIRFFTEKGERYGVVGVLPPHLRRGQQ 123
MD++G MV I+ G + +GG + L+AQR++ T++G GV+G PPHL Q
Sbjct: 67 MDEVGFMVTSINEKGLIRFQTLGGWWSQVLLAQRVQIMTDEGPVIGVIGSTPPHLLEEAQ 126
Query: 124 DKGGKIDWDQIVVDVGASNKEEAEEMGFKVG-TVGEFAPNFTRLSEHRFATPYLDDRICL 182
K +D + +D+GA +KE+A+++G K G + P +E + D+R +
Sbjct: 127 RK-KPMDVKNMYIDIGADDKEDAQKIGIKPGQQIVPICPFTPLANEKKIMAKAWDNRYGV 185
Query: 183 YAMIEAARQL-GEHEADV-YIVASVQEEVGLRGARVASYAIDPEIGIAMDVTFAKQPHDK 240
IE ++L GE ++ Y A+VQEEVGLRGA ++ I+P+I A+D + A
Sbjct: 186 GLAIELLKELQGETTPNILYSGATVQEEVGLRGAATSAQMIEPDIFYALDASPANDATAG 245
Query: 241 GKIVPELGKGPVMDVGPN---INPKLRAFADEVAKKYEIPLQVEPSPRPTGTDANVMQIN 297
+LGKG ++ + + +R F + A+ IP Q S GTDA + ++
Sbjct: 246 KDAFGQLGKGALVRIYDRTMVTHRGIRDFVLDTAETENIPYQFFIS--QGGTDAGRVHLS 303
Query: 298 REGVATAVLSIPIRYMHSQVELADARDVDNTIKLAKALLEEL 339
GV +AV+ I RY+H+ + D AKALL +L
Sbjct: 304 GNGVPSAVIGICSRYIHTAASIIHVDD----YAAAKALLVKL 341
>gb|AAG19796.1| (AE005064) endoglucanase; CelM [Halobacterium sp. NRC-1]
Length = 353
Score = 150 bits (375), Expect = 2e-35
Identities = 105/325 (32%), Positives = 159/325 (48%), Gaps = 10/325 (3%)
Query: 7 MQEIIEAPGVSGYEFLGIRDLVVDLLKEVADEVKVDKLGNVIAHFKGSSPRVMVSAHMDK 66
+ E++ +G+E R + V+ + + AD V+ D GN +A +G +P V + H D+
Sbjct: 9 LDELLAVHSPTGHEAAAQR-VWVEYVSQYADRVETDAYGNAVAVAEGGAPAVAFTGHADE 67
Query: 67 IGVMVNHIDNNGYLHIVPIGGVLPETLVAQRIRFFTEKGERYGVVGVLPPHLRRGQQDKG 126
IG V I G++ I PIGG+ ++R T+ G GV+G HLR +D G
Sbjct: 68 IGFAVAEITEGGFVRIAPIGGLDASVTRGSQVRIETDDGPVNGVIGQAAVHLRDHSED-G 126
Query: 127 GKIDWDQIVVDVGASNKEEAEEMGFKVGTVGEFAPNFTRLSEHRFATPYLDDRICLYAMI 186
+ VD+GA++ ++A + VG G L+ R LD+R L+
Sbjct: 127 AAPSVTEQYVDIGAADGDDARDR-VSVGDPGVLVSEPRELAGGRLNARSLDNRTGLWVAA 185
Query: 187 EAARQLGEHEAD--VYIVASVQEEVGLRGARVASYAIDPEIGIAMDVTFAKQ----PHDK 240
E R+ E + D VY V++V EE+G RGAR+ + +D + +A DVT A P ++
Sbjct: 186 EGFRRAVERDVDATVYAVSTVHEEIGTRGARMVGFDLDVDAVVAADVTHAADDPMYPAER 245
Query: 241 GKIVPELGKGPVMDVGPNINPKLRAFADEVAKKYEIPLQVEPSPRPTGTDANVMQINREG 300
V LG GPV+ G +P + + + A LQV TGTDA+ G
Sbjct: 246 ASTV-ALGDGPVVMRGGTNHPVVVSALRDAAADAGASLQVAAHRISTGTDADAFGTAGGG 304
Query: 301 VATAVLSIPIRYMHSQVELADARDV 325
V TA L IP RYMH+ E+ D D+
Sbjct: 305 VPTADLGIPNRYMHTPAEVVDLADL 329
>pir||S56530 hypothetical protein f383 - Escherichia coli
>gi|537146|gb|AAA97201.1| (U14003) ORF_f383 [Escherichia
coli]
Length = 383
Score = 149 bits (372), Expect = 5e-35
Identities = 102/342 (29%), Positives = 171/342 (49%), Gaps = 19/342 (5%)
Query: 10 IIEAPGVSGYEFLGIRDLVVDLLKEVADEVKVDKLGNVIAHFKGSSP---RVMVSAHMDK 66
+++ +SG+E + D+++ + A EV D+LGNV+A + P R+M+ AHMD+
Sbjct: 22 LLQHNAISGHEN-AVADVMLCEFRRQAKEVWRDRLGNVVARYGSDKPDALRLMIFAHMDE 80
Query: 67 IGVMVNHIDNNGYLHIVPIGGVLPETLVAQRIRFFTEKGERYGVVGVLPPHLRRGQQDKG 126
+G MV I+ +G+L +GG T+ + +KG G +G+ H + ++
Sbjct: 81 VGFMVRKIEPSGFLRFERVGGPAQVTMAGSIVTLTGDKGPVMGCIGIKSYHFAKA-DERT 139
Query: 127 GKIDWDQIVVDVGASNKEEAEEMGFKVGTVGEFAPNFTRLSEHRFATPYLDDRICLYAMI 186
D++ +D+GA +K++A MG +VGT L+ + LDDR+ A++
Sbjct: 140 QSPSVDKLWIDIGAKDKDDAIRMGIQVGTPVTLYNPPQLLANDLVCSKALDDRLGCTALL 199
Query: 187 EAARQLGEHEAD--VYIVASVQEEVGLRGARVASYAIDPEIGIAMDVT---FAKQPHDKG 241
A + E D VY+VASVQEE +RG + P++ I +D+T HD
Sbjct: 200 GVADAISTMELDIAVYLVASVQEEFNIRGIVPVLRRVKPDLAIGIDITPSCDTPDLHDYS 259
Query: 242 KIVPELGKGPV--------MDVGPNINPKLRAFADEVAKKYEIPLQVEPSPRPTGTDANV 293
++ G G G P+L ++ A ++ IP+Q E +P T+
Sbjct: 260 EVRINQGVGITCLNYHGRGTLAGLITPPRLIRMLEQTALEHNIPVQREVAPGVI-TETGY 318
Query: 294 MQINREGVATAVLSIPIRYMHSQVELADARDVDNTIKLAKAL 335
+Q+ ++G+ A LSIP RY HS E+A RD+ + I+L AL
Sbjct: 319 IQVEQDGIPCASLSIPCRYTHSPAEVASLRDLTDCIRLLTAL 360
>pir||E65012 hypothetical protein b2384 - Escherichia coli (strain K-12)
>gi|1788727|gb|AAC75443.1| (AE000326) orf, hypothetical
protein [Escherichia coli K12]
>gi|1799795|dbj|BAA16254.1| (D90868) PUTATIVE FRV OPERON
PROTEIN FRVX. [Escherichia coli]
Length = 345
Score = 148 bits (369), Expect = 1e-34
Identities = 104/345 (30%), Positives = 171/345 (49%), Gaps = 19/345 (5%)
Query: 2 VDWKLMQEIIEAPGVSGYEFLGIRDLVVDLLKEVADEVKVDKLGNVIAHFKGSS-PRVMV 60
+D L++ + EA ++ E +R ++++ + EV+ D LG+V+ S+ P+VM+
Sbjct: 1 MDLSLLKALSEADAIASSE-QEVRQILLEEADRLQKEVRFDGLGSVLIRLNESTGPKVMI 59
Query: 61 SAHMDKIGVMVNHIDNNGYLHIVPIGGVLPETLVAQRIRFFTEKGERYGVVGVLPPHLRR 120
AHMD++G MV I G + ++P+G V Q +R T E + G+L
Sbjct: 60 CAHMDEVGFMVRSISREGAIDVLPVGNVRMAARQLQPVRITTR--EECKIPGLL------ 111
Query: 121 GQQDKGGKIDWDQIVVDVGASNKEEAEEMGFKVGTVGEFAPNFTRLSEHRFATPYLDDRI 180
D+ G D + VD+GA + +E + G + G F F L R DDR+
Sbjct: 112 -DGDRQGN-DVSAMRVDIGARSYDEVMQAGIRPGDRVTFDTTFQVLPHQRVMGKAFDDRL 169
Query: 181 CLYAMIEAARQLGEHE--ADVYIVASVQEEVGLRGARVASYAIDPEIGIAMDVTFAKQPH 238
Y ++ R+L + E A+V++VAS EEVGLRG + A+ A+ P++ I +D +
Sbjct: 170 GCYLLVTLLRELHDAELPAEVWLVASSSEEVGLRGGQTATRAVSPDVAIVLDTACWAKNF 229
Query: 239 DKGKI-VPELGKGPVM---DVGPNINPKLRAFADEVAKKYEIPLQVEPSPRPTGTDANVM 294
D G ++G GP++ D PKL A+ + VA + +PLQ + GTD +
Sbjct: 230 DYGAANHRQIGNGPMLVLSDKSLIAPPKLTAWVETVAAEIGVPLQADMFSN-GGTDGGAV 288
Query: 295 QINREGVATAVLSIPIRYMHSQVELADARDVDNTIKLAKALLEEL 339
+ GV T V+ R+ H +AD RD+ +L AL++ L
Sbjct: 289 HLTGTGVPTVVMGPATRHGHCAASIADCRDILQMQQLLSALIQRL 333
>pir||C72301 endoglucanase - Thermotoga maritima (strain MSB8)
>gi|4981591|gb|AAD36126.1|AE001765_5 (AE001765)
endoglucanase [Thermotoga maritima]
Length = 339
Score = 144 bits (359), Expect = 2e-33
Identities = 106/345 (30%), Positives = 175/345 (50%), Gaps = 17/345 (4%)
Query: 7 MQEIIEAPGVSGYEFLGIRDLVVDLLKEVADEVKVDKLGNVIAHFKG--SSPRVMVSAHM 64
++E+ PGVSG E +RD + ++ + D + D LGN+IA +G SS +++VSAHM
Sbjct: 3 LKELSMMPGVSGDEGK-VRDFIKSKIEGLVDNLYTDVLGNLIALKRGRDSSKKLLVSAHM 61
Query: 65 DKIGVMVNHIDNNGYLHIVPIGGVLPETLVAQRIRFFTEKGERYGVVGVLPPHLRRGQQD 124
D++G +V+ I+ +G + +P+GGV P L + ++ KG V+G P HL+R +++
Sbjct: 62 DEVGFVVSKIEKDGKVSFLPVGGVDPRILPGKVVQVKNLKG----VIGYRPIHLQRDEEN 117
Query: 125 KGGKIDWDQIVVDVGASNKEEAEEMGFKVGTVGEFAPNFTRLSEHRFATPYLDDRICLYA 184
+ ++ + +D G S+ +EA++ +G F ++ + + DDR
Sbjct: 118 TPPR--FENLRIDFGFSSADEAKKY-VSIGDYVSFVSDYIEKNGRAVGKAF-DDRAGCSV 173
Query: 185 MIEAARQLGEHEADVYIVASVQEEVGLRGARVASYAIDPEIGIAMDVTFA--KQPHDKGK 242
+I+ D Y V +VQEE GLRG+ V + P I ++ T A ++ K
Sbjct: 174 LIDVLESGVSPAYDTYFVFTVQEETGLRGSAVVVEQLKPTCAIVVETTTAGDNPELEERK 233
Query: 243 IVPELGKGPVMDV---GPNINPKLRAFADEVAKKYEIPLQVEPSPRPTGTDANVMQINRE 299
LG GP + G I ++ + AK +IP Q++ GTDA
Sbjct: 234 WATHLGDGPAITFYHRGYVIPKEIFQTIVDTAKNNDIPFQMKRRTAG-GTDAGRYARTAY 292
Query: 300 GVATAVLSIPIRYMHSQVELADARDVDNTIKLAKALLEELKPMDL 344
GV V+S P RY+HS + D D +NT KL K L+EE K +++
Sbjct: 293 GVPAGVISTPARYIHSPNSIIDLNDYENTKKLIKVLVEEGKIVEV 337
>pir||D82912 Endo-1,4-beta-glucanase UU280 [imported] - Ureaplasma urealyticum
>gi|6899252|gb|AAF30689.1|AE002124_11 (AE002124)
Endo-1,4-beta-glucanase [Ureaplasma urealyticum]
Length = 363
Score = 135 bits (336), Expect = 8e-31
Identities = 99/339 (29%), Positives = 170/339 (49%), Gaps = 13/339 (3%)
Query: 9 EIIEAPGVSGYEFLGIRDLVVDLLKEVADEVKVDKLGNVIAHFKGSS--PRVMVSAHMDK 66
E +E G+S +E L L K+ + + D LG++I S+ P+++++ HMD+
Sbjct: 15 EYMEIYGMSRHEERVASKLKASL-KDAGVDYERDNLGSIIFKKTNSNKGPKILIATHMDE 73
Query: 67 IGVMVNHIDNNGYLHIVPIGGVLPETLVAQRIRFFTEKGERY-GVVGVLPPHLRRGQQDK 125
+G +V I +NG L + +GGV P + + + ++ +Y GV G H+ + +
Sbjct: 74 VGFVVQQILDNGQLLLSMVGGVWPNIAIGSVAKVYVDEQRQYTGVFGHTSIHILE-PEAR 132
Query: 126 GGKIDWDQIVVDVGASNKEEAEEMGFKVGT-VGEFAPNFTRLSEHRFATPYLDDRICLYA 184
+ ++ VD G ++K++A ++G ++GT V P E+ +D+R+ +
Sbjct: 133 SKAVPVKELFVDCGFNSKQQAIDLGIEIGTEVYMEGPTLNFYDENYIVGKAVDNRVSVAV 192
Query: 185 MIEAARQLGEH--EADVYIVASVQEEVGLRGARVASYAIDPEIGIAMDVTFAKQPHDKGK 242
+ L + Y A+VQEEVGLRGA+ + P+IGI +D T + + +
Sbjct: 193 LDLLIHSLKDKVIPNQTYFAATVQEEVGLRGAKTVVSKVKPDIGIVIDTTTSHDTYKCPE 252
Query: 243 IVPELGKG---PVMDVGPNINPKLRAFADEVAKKYEIPLQVEPSPRPTGTDANVMQIN-R 298
+L G + D G +NPKL + +E+A K+ IPL + R GTDA +Q
Sbjct: 253 GDTKLNDGVCIRIKDGGTLVNPKLVKYFEELAIKHNIPL-YKYVARGGGTDAEELQYGPN 311
Query: 299 EGVATAVLSIPIRYMHSQVELADARDVDNTIKLAKALLE 337
GV T LSIP RY+H+ + +A +D+ L + LE
Sbjct: 312 GGVLTIGLSIPQRYLHAPIGVATVKDIKAAFDLVREFLE 350
>sp|Q48677|PEPA_LACLC GLUTAMYL-AMINOPEPTIDASE >gi|1072381|emb|CAA56994.1| (X81089)
glutamyl-aminopeptidase [Lactococcus lactis]
Length = 355
Score = 122 bits (302), Expect = 8e-27
Identities = 102/346 (29%), Positives = 165/346 (47%), Gaps = 21/346 (6%)
Query: 7 MQEIIEAPGVSGYEFLGIRDLVVDLLKEVADEVKVDKLGNVI---AHFKGSSPRVMVSAH 63
++ + E SG+E +RD + + E+ + + D LG + A ++PR+MV+AH
Sbjct: 7 VKALTEIQATSGFEG-PVRDYLKARMVELGYQPEFDGLGGIFVTKASKVENAPRIMVAAH 65
Query: 64 MDKIGVMVNHIDNNGYLHIVPIGGVLPETLVAQRIRFFTEKGERYGVV-GVLPPHLRRGQ 122
MD++G MV+ I +G +VP+GG P + QR FT G++ VV G LPPHL RG
Sbjct: 66 MDEVGFMVSSIKADGTFRVVPLGGWNPLVVSGQRFTLFTRTGKKIPVVTGGLPPHLLRGT 125
Query: 123 QDKGGKIDWDQIVVDVGASNKEEAEEMGFKVGTVGEFAPNFTRLSEH--RFATPYLDDRI 180
I+ D N EA E G G + T LS + + D+R
Sbjct: 126 GVTPQIPAISDIIFDGAFENAAEAAEFGIAQGDL-IIPETETILSANGKNIISKAWDNRY 184
Query: 181 CLYAMIEAARQLGEHEADVYIV--ASVQEEVGLRGARVASYAIDPEIGIAMDVTFAKQP- 237
++E L + E V ++ A+VQEEVGLRGA+V++ +P++ A+D + A
Sbjct: 185 GCLMILELLEFLADKELPVTLIIGANVQEEVGLRGAKVSTTKFNPDLFFAVDCSPASDTF 244
Query: 238 -HDKGKIVPELGKGPVM---DVGPNINPKLRAFADEVAKKYEIPLQVEPSPRPTGTDANV 293
D G+ LG+G + D G + P ++ F + A ++ QV + GTDA
Sbjct: 245 GDDNGR----LGEGTTLRFFDPGHIMLPGMKNFLLDTANHAKVKTQVYMA--KGGTDAGA 298
Query: 294 MQINREGVATAVLSIPIRYMHSQVELADARDVDNTIKLAKALLEEL 339
+ GV + + + RY+HS + + D +A++ L
Sbjct: 299 AHLANGGVPSTTIGVVARYIHSHQTIFNIDDFLQAQTFLRAIITSL 344
>pir||S72475 glucanase (EC 3.2.1.-) - Anabaena variabilis
>gi|1523802|emb|CAA66983.1| (X98339) glucanase [Anabaena
variabilis]
Length = 346
Score = 76.5 bits (185), Expect = 4e-13
Identities = 85/345 (24%), Positives = 155/345 (44%), Gaps = 26/345 (7%)
Query: 7 MQEIIEAPGVSGYEFLGIRDLVVDLLKEVADEVKVDKLGNVIAHFKG--SSPRVMVSAHM 64
++E++ SG E I L++ + EV D+ N+IA G S V ++AH
Sbjct: 11 IEELVMHHSPSGAE-TEINQLLLQKFAALGVEVWSDRADNIIAKIPGKNSDIAVAITAHK 69
Query: 65 DKIGVMVNHIDNNGYLHIVPIGGVLPETLVAQRIRFFTEKGERYGVVGVLPPHLRRGQ-- 122
D+IG +V +I + G + + +GG P + + G++ H+
Sbjct: 70 DEIGAIVKNIGDAGKVEVRKLGGAYPWVYGEGVVDLLGDNETISGILSFGSRHVSHESPQ 129
Query: 123 --QDKGGKIDWDQIVVDVGASNKEEAEEMGFKVGT---VGEFAPNFTRLSEHRFATPYLD 177
Q + + W+ ++ + EE E G + GT +G+ RL +H A+ LD
Sbjct: 130 KVQQEDTAVKWENAWIETKRTT-EELEAAGIRPGTRMVIGKHRKRPVRLQDH-IASYTLD 187
Query: 178 DRICLYAMIEAARQLGEHEADVYIVASVQEEVGLRGARVASYAIDPEIGIAMDVTFAKQP 237
++ + ++ +QL + DVY+VAS +EEVG GA + + IA+++ +
Sbjct: 188 NKASVAILLALVQQLKQPAIDVYLVASAKEEVGAIGALFFTQNQQLDALIALEICPLSEE 247
Query: 238 H----DKGKIVPELGKGPVMDVGPNINPKLRAFADEVAKKYEIPLQVEPSPRPTGTDANV 293
+ + ++ + D G +N +LR + AK+ + +Q+ + G+DA++
Sbjct: 248 YPVKDSENPVLLVQDAYGIYDEG--LNGELR----QCAKQLNMSVQL-TTLSGFGSDASI 300
Query: 294 -MQINREGVATAVLSIPIRYMHSQVELADARDVDNTIKLAKALLE 337
M+ G A A L+ P + H E+A + N I L KA E
Sbjct: 301 AMKFGHVGRA-ACLAFPTQNTHG-YEIAHLGAISNCINLLKAFCE 343
>pir||D83374 hypothetical protein PA2172 [imported] - Pseudomonas aeruginosa
(strain PAO1) >gi|9948192|gb|AAG05560.1|AE004644_7
(AE004644) hypothetical protein [Pseudomonas aeruginosa]
Length = 358
Score = 74.9 bits (181), Expect = 1e-12
Identities = 84/337 (24%), Positives = 141/337 (40%), Gaps = 37/337 (10%)
Query: 3 DWKLMQEIIEAPGVSGYEFLGIRDLVVDLLKEVADEVKVDKLGNVIA-----HFKGSSPR 57
D L++E++ A G G E +R + L+ DEV D GN++A H R
Sbjct: 5 DRALLEELLLARGPGGQED-EVRAICQRELEGCCDEVGSDAAGNLVARISPPHLPREQAR 63
Query: 58 ---VMVSAHMDKIGVMVNHIDNNGYLHIVPIGGVLPETLVAQRIRFFTEKGERYGVVGVL 114
V + AH+D+I ++V ++ +G L +V +GG P + ++ + GV+
Sbjct: 64 RAAVRLLAHLDEIAMIVKRVEADGTLRVVALGGAQPVSFGVCPVQILAGEAVLDGVLSYG 123
Query: 115 PPHLR----RGQQDKGGKIDWDQIVVDVGASNKEEAEEMGFKVGTVGEFAPNFTR--LSE 168
H +G G + W + V V + EE +G + GT + R +
Sbjct: 124 SMHATGESPQGSDVLSGAVHWRDVHV-VTRRSAEELANLGVRPGTRVVLNRLWRRPLYFQ 182
Query: 169 HRFATPYLDDRICLYAMI----EAARQLGEHEADVYIVASVQEEVGLRGARVASYAIDPE 224
A +LDDR L A++ E AR+ E D+Y+V + EE GA A+ + +
Sbjct: 183 DCVAAHFLDDRAPLLAVLGVAREIARRRDELHGDLYLVLTTMEEESNAGALFAARRLPGD 242
Query: 225 IGIAMDVTFAKQPHDKGKIVPELG----KGPVMDVGPNINPKLRAFADEVAKKYEIPLQV 280
I IA++V G V E G + P+++ G + R D + + E Q
Sbjct: 243 ISIAVEV---------GPTVAEYGTRLCRDPIVNSGDSKGYYSRHVTDRLLRAAE-RCQY 292
Query: 281 EPSPR---PTGTDANVMQINREGVATAVLSIPIRYMH 314
+P +DA+ + + E + IP H
Sbjct: 293 QPQAALLVDFASDASALLSHGEAAQVGCIGIPTENTH 329
>pir||D83214 conserved hypothetical protein PA3461 [imported] - Pseudomonas
aeruginosa (strain PAO1)
>gi|9949603|gb|AAG06849.1|AE004766_10 (AE004766)
conserved hypothetical protein [Pseudomonas aeruginosa]
Length = 398
Score = 73.7 bits (178), Expect = 3e-12
Identities = 61/232 (26%), Positives = 108/232 (46%), Gaps = 10/232 (4%)
Query: 5 KLMQEIIEAPGVSGYEFLGIRDLVVDLLKEVADEVKVDKLGNVIAHFKG--SSPRVMVSA 62
+++ E++ P +G+ +R V + L E+ ++ + G + A +G ++P VSA
Sbjct: 14 RVLLEMLAIPSPTGFTDTIVR-YVAEQLDELGVPFEMTRRGTIRATLQGRLNTPDRAVSA 72
Query: 63 HMDKIGVMVNHIDNNGYLHIVPIGGVLPETLVAQRIRFFTEKGE-RYGVVGVLPPHLRRG 121
H+D IG +V I NG L + P+G R+ FTE+G R V+ +L
Sbjct: 73 HLDTIGALVREIKPNGRLGLAPVGCWSSRFAEGSRVTVFTEQGVFRGSVLPLLASGHAFN 132
Query: 122 QQDKGGKIDWDQIV--VDVGASNKEEAEEMGFKVGTVGEFAPNFTRLSEHRFATPYLDDR 179
+ KI WD I +D +++ ++E +G VG F P + +LDD+
Sbjct: 133 TEVDNLKISWDNIELRLDAYTASRADSESLGISVGDYVAFDPLPEFTESGHISARHLDDK 192
Query: 180 ---ICLYAMIEAARQLG-EHEADVYIVASVQEEVGLRGARVASYAIDPEIGI 227
L A ++A ++ G E D + + ++ EEVG A + + +GI
Sbjct: 193 AGVAALLAALKAVKESGQEPPIDCHPLFTITEEVGSGAAGALPWDVSEFVGI 244
>pir||G75040 probable aminopeptidase (EC 3.4.11.-) PAB0869 - Pyrococcus abyssi
(strain Orsay) >gi|5458733|emb|CAB50220.1| (AJ248287)
similar to glucanase [Pyrococcus abyssi]
Length = 335
Score = 71.8 bits (173), Expect = 1e-11
Identities = 61/216 (28%), Positives = 103/216 (47%), Gaps = 10/216 (4%)
Query: 5 KLMQEIIEAPGVSGYEFLGIRDLVVDLLKEVADEVKVDKLGNVIAHFKGSSPRVMVSAHM 64
K+++EI+E P +GY I + LKE + G ++A P+++V AH+
Sbjct: 6 KILKEILEIPSPTGY-MKEIMPYLESFLKENNVKFYYTNKGALVAG-NHREPKLVVIAHV 63
Query: 65 DKIGVMVNHIDNNGYLHIVPIGGVLPETLVAQRIRFFTEKGERYGVVGVLPPHLRRGQQD 124
D +G MV I NG+L IGG+L T + T +G+++ +L +D
Sbjct: 64 DTLGAMVKEILPNGHLAFSRIGGLLLPTFEGEYCTIITRRGKKFRGTLLLRNPSMHVNKD 123
Query: 125 KGGKIDWDQ---IVVDVGASNKEEAEEMGFKVGTVGEFAPNFTRLSEHRFATPYLDDRIC 181
G K ++ I +D KE+ E++G + G F P F ++ + +LDD+
Sbjct: 124 AGKKERTEENMYIRLDELVEKKEDTEKLGIRPGDYIAFDPKFEYINGF-IKSHFLDDKAS 182
Query: 182 LYAMIEAARQLGEHEADVYIVA---SVQEEVGLRGA 214
+ +++ +GE E + Y VA S EEVG G+
Sbjct: 183 VAVILDLIADMGE-ELEKYPVAFFFSPYEEVGHGGS 217
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.318 0.139 0.399
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 130007424
Number of Sequences: 2977
Number of extensions: 5725714
Number of successful extensions: 12551
Number of sequences better than 1.0e-10: 33
Number of HSP's better than 0.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 12435
Number of HSP's gapped (non-prelim): 33
length of query: 346
length of database: 189,106,746
effective HSP length: 56
effective length of query: 290
effective length of database: 155,591,474
effective search space: 45121527460
effective search space used: 45121527460
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 165 (68.7 bits)