BLASTP 2.0.10 [Aug-26-1999]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= PAB2096 (PAB2096) DE:aminopeptidase from family M42
         (346 letters)

Database: ./suso.pep; /banques/blast2/nr.pep
           598,487 sequences; 189,106,746 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

pir||D75152 aminopeptidase m42 PAB2096 [imported] - Pyrococcus a...   696  0.0
pir||E71193 probable operon protein Frv - Pyrococcus horikoshii ...   671  0.0
pir||JC5634 deblocking aminopeptidase (EC 3.4.11.-) [validated] ...   341  6e-93
pir||E71029 probable Frv operon protein FrvX - Pyrococcus horiko...   341  8e-93
pir||D75105 aminopeptidase m42 PAB0437 [imported] - Pyrococcus a...   340  2e-92
sp|Q57975|Y555_METJA HYPOTHETICAL PROTEIN MJ0555 >gi|2127881|pir...   228  6e-59
pir||A69157 endo-1,4-beta-glucanase - Methanobacterium thermoaut...   210  2e-53
gi|11499384 endoglucanase (celM) [Archaeoglobus fulgidus] >gi|74...   201  1e-50
prf||2113327A endoglucanase [Clostridium thermocellum]                189  6e-47
sp|P55742|GUNM_CLOTM ENDOGLUCANASE M (EGM) (ENDO-1,4-BETA-GLUCAN...   189  6e-47
gb|AAD47606.1|AF146565_2 (AF146565) endoglucanase [Methanococcus...   189  6e-47
pir||B72301 endoglucanase - Thermotoga maritima (strain MSB8) >g...   185  5e-46
pir||E75067 aminopeptidase m42 PAB2375 [imported] - Pyrococcus a...   183  3e-45
dbj|BAB06851.1| (AP001517) endo-1,4-beta-glucanase [Bacillus hal...   178  1e-43
pir||B71165 hypothetical protein PH0519 - Pyrococcus horikoshii ...   172  5e-42
pir||D72301 endoglucanase - Thermotoga maritima (strain MSB8) >g...   168  1e-40
pir||A72609 probable deblocking aminopeptidase APE1335 - Aeropyr...   166  5e-40
sp|P32153|FRVX_ECOLI PUTATIVE FRV OPERON PROTEIN FRVX >gi|541108...   165  8e-40
pir||A69984 endo-1,4-beta-glucanase homolog ysdC - Bacillus subt...   164  1e-39
pir||E75542 probable endoglucanase - Deinococcus radiodurans (st...   164  1e-39
pir||B69998 endo-1,4-beta-glucanase homolog ytoP - Bacillus subt...   160  2e-38
sp|P39366|SGCX_ECOLI PUTATIVE SGC REGION PROTEIN SGCX >gi|743557...   151  1e-35
dbj|BAB06976.1| (AP001518) endo-1,4-beta-glucanase [Bacillus hal...   151  1e-35
gb|AAG19796.1| (AE005064) endoglucanase; CelM [Halobacterium sp....   150  2e-35
pir||S56530 hypothetical protein f383 - Escherichia coli >gi|537...   149  5e-35
pir||E65012 hypothetical protein b2384 - Escherichia coli (strai...   148  1e-34
pir||C72301 endoglucanase - Thermotoga maritima (strain MSB8) >g...   144  2e-33
pir||D82912 Endo-1,4-beta-glucanase UU280 [imported] - Ureaplasm...   135  8e-31
sp|Q48677|PEPA_LACLC GLUTAMYL-AMINOPEPTIDASE >gi|1072381|emb|CAA...   122  8e-27
pir||S72475 glucanase (EC 3.2.1.-) - Anabaena variabilis >gi|152...    76  4e-13
pir||D83374 hypothetical protein PA2172 [imported] - Pseudomonas...    75  1e-12
pir||D83214 conserved hypothetical protein PA3461 [imported] - P...    74  3e-12
pir||G75040 probable aminopeptidase (EC 3.4.11.-) PAB0869 - Pyro...    72  1e-11

>pir||D75152 aminopeptidase m42 PAB2096 [imported] - Pyrococcus abyssi  (strain
           Orsay) >gi|5457809|emb|CAB49299.1| (AJ248284)
           aminopeptidase from family M42 [Pyrococcus abyssi]
           Length = 346
           
 Score =  696 bits (1778), Expect = 0.0
 Identities = 346/346 (100%), Positives = 346/346 (100%)

Query: 1   MVDWKLMQEIIEAPGVSGYEFLGIRDLVVDLLKEVADEVKVDKLGNVIAHFKGSSPRVMV 60
           MVDWKLMQEIIEAPGVSGYEFLGIRDLVVDLLKEVADEVKVDKLGNVIAHFKGSSPRVMV
Sbjct: 1   MVDWKLMQEIIEAPGVSGYEFLGIRDLVVDLLKEVADEVKVDKLGNVIAHFKGSSPRVMV 60

Query: 61  SAHMDKIGVMVNHIDNNGYLHIVPIGGVLPETLVAQRIRFFTEKGERYGVVGVLPPHLRR 120
           SAHMDKIGVMVNHIDNNGYLHIVPIGGVLPETLVAQRIRFFTEKGERYGVVGVLPPHLRR
Sbjct: 61  SAHMDKIGVMVNHIDNNGYLHIVPIGGVLPETLVAQRIRFFTEKGERYGVVGVLPPHLRR 120

Query: 121 GQQDKGGKIDWDQIVVDVGASNKEEAEEMGFKVGTVGEFAPNFTRLSEHRFATPYLDDRI 180
           GQQDKGGKIDWDQIVVDVGASNKEEAEEMGFKVGTVGEFAPNFTRLSEHRFATPYLDDRI
Sbjct: 121 GQQDKGGKIDWDQIVVDVGASNKEEAEEMGFKVGTVGEFAPNFTRLSEHRFATPYLDDRI 180

Query: 181 CLYAMIEAARQLGEHEADVYIVASVQEEVGLRGARVASYAIDPEIGIAMDVTFAKQPHDK 240
           CLYAMIEAARQLGEHEADVYIVASVQEEVGLRGARVASYAIDPEIGIAMDVTFAKQPHDK
Sbjct: 181 CLYAMIEAARQLGEHEADVYIVASVQEEVGLRGARVASYAIDPEIGIAMDVTFAKQPHDK 240

Query: 241 GKIVPELGKGPVMDVGPNINPKLRAFADEVAKKYEIPLQVEPSPRPTGTDANVMQINREG 300
           GKIVPELGKGPVMDVGPNINPKLRAFADEVAKKYEIPLQVEPSPRPTGTDANVMQINREG
Sbjct: 241 GKIVPELGKGPVMDVGPNINPKLRAFADEVAKKYEIPLQVEPSPRPTGTDANVMQINREG 300

Query: 301 VATAVLSIPIRYMHSQVELADARDVDNTIKLAKALLEELKPMDLTP 346
           VATAVLSIPIRYMHSQVELADARDVDNTIKLAKALLEELKPMDLTP
Sbjct: 301 VATAVLSIPIRYMHSQVELADARDVDNTIKLAKALLEELKPMDLTP 346


>pir||E71193 probable operon protein Frv - Pyrococcus horikoshii
           >gi|3258257|dbj|BAA30940.1| (AP000007) 354aa long
           hypothetical operon protein Frv [Pyrococcus horikoshii]
           Length = 354
           
 Score =  671 bits (1713), Expect = 0.0
 Identities = 328/346 (94%), Positives = 341/346 (97%)

Query: 1   MVDWKLMQEIIEAPGVSGYEFLGIRDLVVDLLKEVADEVKVDKLGNVIAHFKGSSPRVMV 60
           MVDWKLMQEIIEAPGVSGYE LGIRD+VVD+LKEVADEVKVDKLGNVIAHFKGSSPR+MV
Sbjct: 9   MVDWKLMQEIIEAPGVSGYEHLGIRDIVVDVLKEVADEVKVDKLGNVIAHFKGSSPRIMV 68

Query: 61  SAHMDKIGVMVNHIDNNGYLHIVPIGGVLPETLVAQRIRFFTEKGERYGVVGVLPPHLRR 120
           +AHMDKIGVMVNHID +GYLHIVPIGGVLPETLVAQRIRFFTEKGERYGVVGVLPPHLRR
Sbjct: 69  AAHMDKIGVMVNHIDKDGYLHIVPIGGVLPETLVAQRIRFFTEKGERYGVVGVLPPHLRR 128

Query: 121 GQQDKGGKIDWDQIVVDVGASNKEEAEEMGFKVGTVGEFAPNFTRLSEHRFATPYLDDRI 180
           GQ+DKG KIDWDQIVVDVGAS+KEEAEEMGF+VGTVGEFAPNFTRL+EHRFATPYLDDRI
Sbjct: 129 GQEDKGSKIDWDQIVVDVGASSKEEAEEMGFRVGTVGEFAPNFTRLNEHRFATPYLDDRI 188

Query: 181 CLYAMIEAARQLGEHEADVYIVASVQEEVGLRGARVASYAIDPEIGIAMDVTFAKQPHDK 240
           CLYAMIEAARQLG+HEAD+YIV SVQEEVGLRGARVASYAI+PE+GIAMDVTFAKQPHDK
Sbjct: 189 CLYAMIEAARQLGDHEADIYIVGSVQEEVGLRGARVASYAINPEVGIAMDVTFAKQPHDK 248

Query: 241 GKIVPELGKGPVMDVGPNINPKLRAFADEVAKKYEIPLQVEPSPRPTGTDANVMQINREG 300
           GKIVPELGKGPVMDVGPNINPKLRAFADEVAKKYEIPLQVEPSPRPTGTDANVMQINREG
Sbjct: 249 GKIVPELGKGPVMDVGPNINPKLRAFADEVAKKYEIPLQVEPSPRPTGTDANVMQINREG 308

Query: 301 VATAVLSIPIRYMHSQVELADARDVDNTIKLAKALLEELKPMDLTP 346
           VATAVLSIPIRYMHSQVELADARDVDNTIKLAKALLEELKPMD TP
Sbjct: 309 VATAVLSIPIRYMHSQVELADARDVDNTIKLAKALLEELKPMDFTP 354


>pir||JC5634 deblocking aminopeptidase (EC 3.4.11.-) [validated] - Pyrococcus
           furiosus
           Length = 348
           
 Score =  341 bits (866), Expect = 6e-93
 Identities = 172/350 (49%), Positives = 245/350 (69%), Gaps = 8/350 (2%)

Query: 1   MVDWKLMQEIIEAPGVSGYEFLGIRDLVVDLLKEVADEVKVDKLGNVIAHFKGSSPRVMV 60
           MVD++L+++++EAPGVSGYEF+GIRD+V++ +K+  DEV VDKLGNVIAH KG  P+VM+
Sbjct: 1   MVDYELLKKVVEAPGVSGYEFMGIRDVVIEEIKDYVDEVNVDKLGNVIAHKKGEGPKVMI 60

Query: 61  SAHMDKIGVMVNHIDNNGYLHIVPIGGVLPETLVAQRIRFFTEKGE-RYGVVGVLPPHLR 119
           +AHMD+IG+MV HI+ NG+L + PIGG+ P TL+AQR   + +KG+  YGV G +PPH++
Sbjct: 61  AAHMDQIGLMVTHIEKNGFLRVAPIGGIDPRTLIAQRFNVWIDKGKFIYGVGGSVPPHIQ 120

Query: 120 RGQQDKGGKIDWDQIVVDVGASNKEEAEEMGFKVGTVGEFAPNFTRLSEHRFATPYLDDR 179
           +  +D+    DWDQI +D+GA +KEEAEE+G K+GT+  +     RL +HRF +   DDR
Sbjct: 121 K-PEDRKKAPDWDQIFIDIGAESKEEAEELGVKIGTIVTWDGRLERLGKHRFVSIAFDDR 179

Query: 180 ICLYAMIEAARQLGEHEADVYIVASVQEEVGLRGARVASYAIDPEIGIAMDVTFAKQ--P 237
           I +Y +IE ARQL + +AD+Y VA+VQEEVGLRGAR +++ I+P+ G A+DVT A     
Sbjct: 180 IAVYTLIETARQLQDTKADIYFVATVQEEVGLRGARTSAFGINPDYGFAIDVTIAADVPG 239

Query: 238 HDKGKIVPELGKG---PVMDVGPNINPKLRAFADEVAKKYEIPLQVEPSPRPTGTDANVM 294
             + K V +LGKG    +MD     +P +  + +E+AKKYEIP Q +      GTDA  +
Sbjct: 240 TPEHKQVTQLGKGTAIKIMDRSVICHPTIVRWMEELAKKYEIPYQWD-ILLGGGTDAGAI 298

Query: 295 QINREGVATAVLSIPIRYMHSQVELADARDVDNTIKLAKALLEELKPMDL 344
            + R GV T  +SIP RY+HS  E+ D RDVD ++KL   +LE +  + +
Sbjct: 299 HLTRAGVPTGAVSIPARYIHSNAEVVDERDVDASVKLMVKVLEHIHELKI 348


>pir||E71029 probable Frv operon protein FrvX - Pyrococcus horikoshii
           >gi|3257954|dbj|BAA30637.1| (AP000006) 353aa long
           hypothetical Frv operon protein FrvX [Pyrococcus
           horikoshii]
           Length = 353
           
 Score =  341 bits (865), Expect = 8e-93
 Identities = 173/350 (49%), Positives = 246/350 (69%), Gaps = 8/350 (2%)

Query: 1   MVDWKLMQEIIEAPGVSGYEFLGIRDLVVDLLKEVADEVKVDKLGNVIAHFKGSSPRVMV 60
           MVD++L+++++EAPGVSGYEFLGIRD+V++ +K+  DEVKVDKLGNVIAH KG  P+VM+
Sbjct: 6   MVDYELLKKVVEAPGVSGYEFLGIRDVVIEEIKDYVDEVKVDKLGNVIAHKKGEGPKVMI 65

Query: 61  SAHMDKIGVMVNHIDNNGYLHIVPIGGVLPETLVAQRIRFFTEKGE-RYGVVGVLPPHLR 119
           +AHMD+IG+MV HI+ NG+L + PIGGV P+TL+AQR + + +KG+  YGV   +PPH++
Sbjct: 66  AAHMDQIGLMVTHIEKNGFLRVAPIGGVDPKTLIAQRFKVWIDKGKFIYGVGASVPPHIQ 125

Query: 120 RGQQDKGGKIDWDQIVVDVGASNKEEAEEMGFKVGTVGEFAPNFTRLSEHRFATPYLDDR 179
           +  +D+    DWDQI +D+GA +KEEAE+MG K+GTV  +     RL +HRF +   DDR
Sbjct: 126 K-PEDRKKAPDWDQIFIDIGAESKEEAEDMGVKIGTVITWDGRLERLGKHRFVSIAFDDR 184

Query: 180 ICLYAMIEAARQLGEHEADVYIVASVQEEVGLRGARVASYAIDPEIGIAMDVTFAKQ--P 237
           I +Y ++E A+QL + +ADVY VA+VQEEVGLRGAR +++ I+P+ G A+DVT A     
Sbjct: 185 IAVYTILEVAKQLKDAKADVYFVATVQEEVGLRGARTSAFGIEPDYGFAIDVTIAADIPG 244

Query: 238 HDKGKIVPELGKG---PVMDVGPNINPKLRAFADEVAKKYEIPLQVEPSPRPTGTDANVM 294
             + K V  LGKG    +MD     +P +  + +E+AKK+EIP Q+E      GTDA  +
Sbjct: 245 TPEHKQVTHLGKGTAIKIMDRSVICHPTIVRWLEELAKKHEIPYQLE-ILLGGGTDAGAI 303

Query: 295 QINREGVATAVLSIPIRYMHSQVELADARDVDNTIKLAKALLEELKPMDL 344
            + + GV T  LS+P RY+HS  E+ D RDVD T++L    LE +  + +
Sbjct: 304 HLTKAGVPTGALSVPARYIHSNTEVVDERDVDATVELMTKALENIHELKI 353


>pir||D75105 aminopeptidase m42 PAB0437 [imported] - Pyrococcus abyssi  (strain
           Orsay) >gi|5458068|emb|CAB49557.1| (AJ248285)
           aminopeptidase from family M42 [Pyrococcus abyssi]
           Length = 348
           
 Score =  340 bits (862), Expect = 2e-92
 Identities = 174/350 (49%), Positives = 246/350 (69%), Gaps = 8/350 (2%)

Query: 1   MVDWKLMQEIIEAPGVSGYEFLGIRDLVVDLLKEVADEVKVDKLGNVIAHFKGSSPRVMV 60
           MV+++L+++++EAPGVSGYEFLGIRD+V++ +K+  DEVKVDKLGNVIAH KG  P+VM+
Sbjct: 1   MVNYELLKKVVEAPGVSGYEFLGIRDVVIEEIKDYVDEVKVDKLGNVIAHRKGEGPKVMI 60

Query: 61  SAHMDKIGVMVNHIDNNGYLHIVPIGGVLPETLVAQRIRFFTEKGE-RYGVVGVLPPHLR 119
           +AHMD+IG+MV +I+ NG+L + PIGGV P+TL+AQR + + +K +  YGV   +PPH++
Sbjct: 61  AAHMDQIGLMVTNIEKNGFLRVAPIGGVDPKTLIAQRFKVWIDKDKFIYGVGASVPPHIQ 120

Query: 120 RGQQDKGGKIDWDQIVVDVGASNKEEAEEMGFKVGTVGEFAPNFTRLSEHRFATPYLDDR 179
           + ++ K    +WDQI +D+GA +KEEAEEMG ++GTV  +     RL +HRF +   DDR
Sbjct: 121 KPEERKKAP-EWDQIFIDIGAESKEEAEEMGVRIGTVITWDGRLERLGKHRFVSIAFDDR 179

Query: 180 ICLYAMIEAARQLGEHEADVYIVASVQEEVGLRGARVASYAIDPEIGIAMDVTFAKQ--P 237
           I +Y M+E ARQL + +ADVY VA+VQEEVGLRGAR +++AI+P+ G A+DVT A     
Sbjct: 180 IAVYTMLEVARQLEDTKADVYFVATVQEEVGLRGARTSAFAIEPDYGFAIDVTIAADVPG 239

Query: 238 HDKGKIVPELGKG---PVMDVGPNINPKLRAFADEVAKKYEIPLQVEPSPRPTGTDANVM 294
             + K V  LGKG    +MD     +P +  + +E+AKKYEIP Q+E      GTDA  +
Sbjct: 240 TPEHKQVTHLGKGTAIKIMDRSVICHPTIVRWLEELAKKYEIPYQLE-ILLGGGTDAGAI 298

Query: 295 QINREGVATAVLSIPIRYMHSQVELADARDVDNTIKLAKALLEELKPMDL 344
            + + GV T  LS+P RY+HS  E+ D RDVD T+KL    LE +  + +
Sbjct: 299 HLTKAGVPTGALSVPARYIHSNAEVVDERDVDATVKLMVKALENIHELKI 348


>sp|Q57975|Y555_METJA HYPOTHETICAL PROTEIN MJ0555 >gi|2127881|pir||C64369 endoglucanase
           homolog - Methanococcus jannaschii
           >gi|1591260|gb|AAB98546.1| (U67504) endoglucanase (celM)
           [Methanococcus jannaschii]
           Length = 350
           
 Score =  228 bits (576), Expect = 6e-59
 Identities = 126/343 (36%), Positives = 209/343 (60%), Gaps = 13/343 (3%)

Query: 7   MQEIIEAPGVSGYEFLGIRDLVVDLLKEVADEVKVDKLGNVIAHFKGSSPRVMVSAHMDK 66
           ++++ +  G+SG E   +R+ +   L++  D V++D  GN+IA       ++M++AHMD+
Sbjct: 7   LKKLSKLHGISGRED-SVREFMKKELEKYCDSVEIDNFGNLIAKRGNKGKKIMIAAHMDE 65

Query: 67  IGVMVNHIDNNGYLHIVPIGGVLPETLVAQRIRFFTEKGERYGVVGVLPPHLRRGQQDKG 126
           IG+MV +ID+NG+L    IGG+   T++ Q++     KG+  GV+G  PPH R  +++K 
Sbjct: 66  IGLMVKYIDDNGFLKFTKIGGIYDPTILNQKVVVHGSKGDLIGVLGSKPPH-RMKEEEKT 124

Query: 127 GKIDWDQIVVDVGASNKEEAEEMGFKVGTVGEFAPNFTRLSEHRFATPYLDDRICLYAMI 186
             I ++ + +D+GA ++EEA EMG  +GT   F      L ++R      DDR+    ++
Sbjct: 125 KIIKYEDMFIDIGAESREEAIEMGVNIGTWVSFLSEVYDLGKNRLTGKAFDDRVGCAVLL 184

Query: 187 EAARQLGEHEAD--VYIVASVQEEVGLRGARVASYAIDPEIGIAMDVTFA-KQPHDKGKI 243
           E  ++L E + D  VY V +VQEEVGL+GARV+++ I+P++ IA+DVT A   P  K + 
Sbjct: 185 EVMKRLSEEDIDCQVYAVGTVQEEVGLKGARVSAFKINPDVAIALDVTIAGDHPGIKKED 244

Query: 244 VP-ELGKGPVMDV------GPNINPKLRAFADEVAKKYEIPLQVEPSPRPTGTDANVMQI 296
            P +LGKGPV+ +      G   +PK+      V++KY+I +Q E     T TDA  + +
Sbjct: 245 APVDLGKGPVVGIVDASGRGLIAHPKVLDMIKAVSEKYKIDVQWEVGEGGT-TDATAIHL 303

Query: 297 NREGVATAVLSIPIRYMHSQVELADARDVDNTIKLAKALLEEL 339
            REG+ T V+S+P RY+H+ VE+ D RD++ T++L    ++E+
Sbjct: 304 TREGIPTGVISVPARYIHTPVEVIDKRDLEKTVELVYNCIKEV 346


>pir||A69157 endo-1,4-beta-glucanase - Methanobacterium thermoautotrophicum
           (strain Delta H) >gi|2621502|gb|AAB84943.1| (AE000827)
           endo-1,4-beta-glucanase  [Methanobacterium
           thermoautotrophicum]
           Length = 343
           
 Score =  210 bits (530), Expect = 2e-53
 Identities = 123/343 (35%), Positives = 205/343 (58%), Gaps = 13/343 (3%)

Query: 5   KLMQEIIEAPGVSGYEFLGIRDLVVDLLKEVADEVKVDKLGNVIAHFKGSSPRVMVSAHM 64
           +LM+ +  A G+SG+E   +RD++   L+   DE++ D LGN+IA  +GS P +M++AHM
Sbjct: 6   ELMKRLSVASGISGFEG-EVRDIIRSELEGHVDEIEEDSLGNIIAVKRGSGPSIMLAAHM 64

Query: 65  DKIGVMVNHIDNNGYLHIVPIGGVLPETLVAQRIRFFTEKGERYGVVGVLPPHLRRGQQD 124
           D+IG+MV HID  G++    IGG+  + ++ Q +    E G   GV+G  PPH  +  + 
Sbjct: 65  DEIGLMVRHIDKKGFIRFSKIGGISDQMILNQAVWIHGENGPVMGVIGSKPPHRMKASER 124

Query: 125 KGGKIDWDQIVVDVGASNKEEAEEMGFKVGTVGEFAPNFTRLSEHRFATPYLDDRICLYA 184
           K      D + +D+GAS++E+AEE+   VG    F   ++ L+  RF    LD+RI    
Sbjct: 125 K-KVTTHDNMFIDIGASSREDAEEL-VAVGDPITFHAPYSELANSRFTGKALDNRIGCLV 182

Query: 185 MIEAARQLGEHEADVYIVASVQEEVGLRGARVASYAIDPEIGIAMDVTFA-KQPHDKGKI 243
           M+E  +++ E  A VY V +VQEEVGL+GA+ +++ ++P++ +A+DVT A   P  K + 
Sbjct: 183 MVEVLKRV-ETGATVYGVGTVQEEVGLKGAKTSAFRLNPDMTLALDVTIAGDHPGMKEEE 241

Query: 244 VP-ELGKGPVMDV------GPNINPKLRAFADEVAKKYEIPLQVEPSPRPTGTDANVMQI 296
            P +L  GP + +      G   +P+++ +  E A++ +IP+Q+E S   T TDA  + +
Sbjct: 242 APAKLEGGPAIILTDASGRGIITHPRVKDWLLETAREEDIPVQIEVSEGGT-TDATAIHL 300

Query: 297 NREGVATAVLSIPIRYMHSQVELADARDVDNTIKLAKALLEEL 339
            REG+   V+S+P RY+H+ V +A  +D++ T+ L    +E L
Sbjct: 301 TREGIPAGVVSVPTRYIHTTVSMASMKDIEMTVDLLVKAIERL 343


>gi|11499384 endoglucanase (celM) [Archaeoglobus fulgidus]
           >gi|7435574|pir||B69474 endoglucanase (celM) homolog -
           Archaeoglobus fulgidus >gi|2648753|gb|AAB89455.1|
           (AE000979) endoglucanase (celM) [Archaeoglobus fulgidus]
           Length = 304
           
 Score =  201 bits (505), Expect = 1e-50
 Identities = 114/305 (37%), Positives = 178/305 (57%), Gaps = 12/305 (3%)

Query: 44  LGNVIAHFKGSSPRVMVSAHMDKIGVMVNHIDNNGYLHIVPIGGVLPETLVAQRIRFFTE 103
           +GN+I    G  P +MV+AHMD+IG  V +ID+ G++ I PIGG   +  +AQR+  + +
Sbjct: 1   MGNLICTKNGGEPEIMVAAHMDEIGFAVKYIDDKGFIRIAPIGGWFSQIALAQRVVLYGK 60

Query: 104 KGERYGVVGVLPPHLRRGQQDKGGKIDWDQIVVDVGASNKEEAEEMGFKVGTVGEFAPNF 163
           K + YGV+G  PPHL + ++ K G I+   + VD+GAS+KEE  EMG  VGT        
Sbjct: 61  K-KVYGVIGCKPPHLMKDEERKKG-IEIKDMFVDIGASSKEEVLEMGINVGTPVALDREI 118

Query: 164 TRLSEHRFATPYLDDRICLYAMIEAARQLGEHEADVYIVASVQEEVGLRGARVASYAIDP 223
             L+  R      D+R+ +  MIEA R+  + +  ++ VA+VQEEVGL+GAR +++AI+P
Sbjct: 119 VELANGRITGKAFDNRVGVAVMIEAVRR-AKADITIHAVATVQEEVGLKGARTSAFAIEP 177

Query: 224 EIGIAMDVTFAKQ--PHDKGKIVPELGKGPVMDV------GPNINPKLRAFADEVAKKYE 275
              IA+D   A      +   +  +LGKG  + V      G   +PK+  +  E A+KY 
Sbjct: 178 TAAIAVDTCVAADFPGSESAHMDVKLGKGAAITVIDASGRGLIASPKVLRWLTETAEKYG 237

Query: 276 IPLQVEPSPRPTGTDANVMQINREGVATAVLSIPIRYMHSQVELADARDVDNTIKLAKAL 335
           IP Q+E +   T TDA  + + + G+   V+S+P RY+HS VE+ D +DV++ +++    
Sbjct: 238 IPYQLEVAEGGT-TDATAIHLTKAGIPAGVVSVPARYIHSPVEVVDLKDVESAVEIVARA 296

Query: 336 LEELK 340
           +E  K
Sbjct: 297 IENAK 301


>prf||2113327A endoglucanase [Clostridium thermocellum]
           Length = 325
           
 Score =  189 bits (474), Expect = 6e-47
 Identities = 116/329 (35%), Positives = 189/329 (57%), Gaps = 16/329 (4%)

Query: 6   LMQEIIEAPGVSGYEFLGIRDLVVDLLKEVADEVKVDKLGNVIAHFKGSSPRVMVSAHMD 65
           L+++     GVSG E   IR+ +++ +KE  DE+KVD LGN+IA  KG   ++MV+AHMD
Sbjct: 4   LLKKFTGIVGVSGNEE-EIREAIIEEIKECVDEIKVDTLGNLIAVKKGKGKKIMVAAHMD 62

Query: 66  KIGVMVNHIDNNGYLHIVPIGGVLPETLVAQRIRFFTEKGERYGVVGVLPPHLRRGQQDK 125
           +IGVMV +ID+ G+L    +GGV     + QR++F      + GVVG +  +     +D 
Sbjct: 63  EIGVMVTYIDDKGFLRFSAVGGVSRYDCIGQRVKF------KNGVVGAV--YYEEKLEDM 114

Query: 126 GGKIDWDQIVVDVGASNKEEAEEMGFKVGTVGEFAPNFTRLSEHRFATPYLDDRICLYAM 185
              +   ++ +D+GA ++EEA +M   +G V  F  +   L      +  LD+R     +
Sbjct: 115 -KNLQLSKMYIDIGARSREEALKM-VNIGDVACFVGDAV-LQGDTVISKALDNRSGCAVV 171

Query: 186 IEAARQLGEHEADVYIVASVQEEVGLRGARVASYAIDPEIGIAMDVTFAKQPHDKGKIVP 245
           ++A ++L + + ++Y V +VQEEVGLRGA+ A+++I P+I IA+DVT      +   +  
Sbjct: 172 VKAIKELKKTDNEIYFVFTVQEEVGLRGAKTAAFSIKPDIAIAVDVTMTGDTPESHPMEV 231

Query: 246 ELGKGP---VMDVGPNINPKLRAFADEVAKKYEIPLQVEPSPRPTGTDANVMQINREGVA 302
           + G GP   V D     +P++R   +E AK+  IP Q+E      G+D   + +   G+ 
Sbjct: 232 KCGGGPAIKVKDRSVICHPEVRKLLEESAKRNNIPYQLE-ILEAGGSDPGSIHLTAGGIP 290

Query: 303 TAVLSIPIRYMHSQVELADARDVDNTIKL 331
           +  +SIP+RY+HS VE A   D++N +KL
Sbjct: 291 SGAISIPVRYVHSPVETASMSDINNAVKL 319


>sp|P55742|GUNM_CLOTM ENDOGLUCANASE M (EGM) (ENDO-1,4-BETA-GLUCANASE) (CELLULASE M)
           Length = 330
           
 Score =  189 bits (474), Expect = 6e-47
 Identities = 116/329 (35%), Positives = 189/329 (57%), Gaps = 16/329 (4%)

Query: 6   LMQEIIEAPGVSGYEFLGIRDLVVDLLKEVADEVKVDKLGNVIAHFKGSSPRVMVSAHMD 65
           L+++     GVSG E   IR+ +++ +KE  DE+KVD LGN+IA  KG   ++MV+AHMD
Sbjct: 9   LLKKFTGIVGVSGNEE-EIREAIIEEIKECVDEIKVDTLGNLIAVKKGKGKKIMVAAHMD 67

Query: 66  KIGVMVNHIDNNGYLHIVPIGGVLPETLVAQRIRFFTEKGERYGVVGVLPPHLRRGQQDK 125
           +IGVMV +ID+ G+L    +GGV     + QR++F      + GVVG +  +     +D 
Sbjct: 68  EIGVMVTYIDDKGFLRFSAVGGVSRYDCIGQRVKF------KNGVVGAV--YYEEKLEDM 119

Query: 126 GGKIDWDQIVVDVGASNKEEAEEMGFKVGTVGEFAPNFTRLSEHRFATPYLDDRICLYAM 185
              +   ++ +D+GA ++EEA +M   +G V  F  +   L      +  LD+R     +
Sbjct: 120 -KNLQLSKMYIDIGARSREEALKM-VNIGDVACFVGDAV-LQGDTVISKALDNRSGCAVV 176

Query: 186 IEAARQLGEHEADVYIVASVQEEVGLRGARVASYAIDPEIGIAMDVTFAKQPHDKGKIVP 245
           ++A ++L + + ++Y V +VQEEVGLRGA+ A+++I P+I IA+DVT      +   +  
Sbjct: 177 VKAIKELKKTDNEIYFVFTVQEEVGLRGAKTAAFSIKPDIAIAVDVTMTGDTPESHPMEV 236

Query: 246 ELGKGP---VMDVGPNINPKLRAFADEVAKKYEIPLQVEPSPRPTGTDANVMQINREGVA 302
           + G GP   V D     +P++R   +E AK+  IP Q+E      G+D   + +   G+ 
Sbjct: 237 KCGGGPAIKVKDRSVICHPEVRKLLEESAKRNNIPYQLE-ILEAGGSDPGSIHLTAGGIP 295

Query: 303 TAVLSIPIRYMHSQVELADARDVDNTIKL 331
           +  +SIP+RY+HS VE A   D++N +KL
Sbjct: 296 SGAISIPVRYVHSPVETASMSDINNAVKL 324


>gb|AAD47606.1|AF146565_2 (AF146565) endoglucanase [Methanococcus maripaludis]
           Length = 321
           
 Score =  189 bits (474), Expect = 6e-47
 Identities = 107/310 (34%), Positives = 179/310 (57%), Gaps = 13/310 (4%)

Query: 15  GVSGYEFLGIRDLVVDLLKEVADEVKVDKLGNVIAHFKGSSPRVMVSAHMDKIGVMVNHI 74
           G+SG E   IR+ +   L++  D ++ DK GN+IA    + P++M+++HMD+IG+MV +I
Sbjct: 15  GISGRED-NIREYMKKELEKYCDSIETDKFGNLIAKKGSTGPKIMIASHMDEIGLMVKYI 73

Query: 75  DNNGYLHIVPIGGVLPETLVAQRIRFFTEKGERYGVVGVLPPHLRRGQQDKGGKIDWDQI 134
           D+ G+L    IGG+  + L+ Q++      G+  GV+G  PPH +  + ++   I  + +
Sbjct: 74  DDKGFLKFTKIGGINDQMLLNQKVIVHGNNGDIVGVLGSKPPH-KMKESERNKLISAEHM 132

Query: 135 VVDVGASNKEEAEEMGFKVGTVGEFAPNFTRLSEHRFATPYLDDRICLYAMIEAARQLGE 194
            +D+GA N+EEAE+MG ++GT   F   F +L  +  +    D+R     +++    L +
Sbjct: 133 FIDIGAKNREEAEKMGVEIGTAMSFKSEFDKLGGNVVSCKSFDNRAGCAVVLKTMELLKD 192

Query: 195 HE--ADVYIVASVQEEVGLRGARVASYAIDPEIGIAMDVTF-AKQPHDKGKIVP-ELGKG 250
            +    VY V +VQEEVG++GA+ +++ I+P++  A+DVT     P  K +  P ELGKG
Sbjct: 193 MDLKCQVYAVGTVQEEVGVKGAKTSAFGINPDVAFALDVTICGDHPGIKLEDAPVELGKG 252

Query: 251 PVMDV------GPNINPKLRAFADEVAKKYEIPLQVEPSPRPTGTDANVMQINREGVATA 304
           PV  +      G   +P +     +V+K  EIP+Q E     T TDA  + + R+G+ T 
Sbjct: 253 PVATIVDASGRGIITHPTVLRMVRDVSKADEIPVQYEVGEGGT-TDATAIHLTRDGIPTG 311

Query: 305 VLSIPIRYMH 314
           V+S+P RY+H
Sbjct: 312 VISVPSRYIH 321


>pir||B72301 endoglucanase - Thermotoga maritima (strain MSB8)
           >gi|4981590|gb|AAD36125.1|AE001765_4 (AE001765)
           endoglucanase [Thermotoga maritima]
           Length = 334
           
 Score =  185 bits (466), Expect = 5e-46
 Identities = 112/339 (33%), Positives = 187/339 (55%), Gaps = 15/339 (4%)

Query: 5   KLMQEIIEAPGVSGYEFLGIRDLVVDLLKEVADEVKVDKLGNVIAHFKGSS-PRVMVSAH 63
           KL+ E+    G SGYE   +   +  +++   DE K  + G++I + KG    ++   AH
Sbjct: 7   KLLMELSNLDGPSGYE-TNVVSYIKSVIEPFVDEAKTTRHGSLIGYKKGKGIGKLAFFAH 65

Query: 64  MDKIGVMVNHIDNNGYLHIVPIGGVLPETLVAQRIRFFTEKGERYGVVGVLPPHLRRGQQ 123
           +D+IG +V+ ++   +  + P+GGV P+ + A ++R +T+ G   GV+G+L PHL+  + 
Sbjct: 66  VDEIGFVVSKVEGQ-FARLEPVGGVDPKVVYASKVRIYTKNGIERGVIGMLAPHLQDSES 124

Query: 124 DKGGKIDWDQIVVDVGASNKEEAEEMGFKVGTVGEFAPNFTRLSEHRFATPYLDDRICLY 183
            K   + +D+I VD+    ++       +VG +          +  +     LD+R    
Sbjct: 125 RKK-VLTYDEIFVDLSLCERD------VRVGDIAVIDQTAFE-TNGKVVGKALDNRASCG 176

Query: 184 AMIEAARQLG--EHEADVYIVASVQEEVGLRGARVASYAIDPEIGIAMDVTFAKQPHDKG 241
            +++    L   +H  DVY+V SVQEE G  GA   +Y I+P+  I MDVTFA +P    
Sbjct: 177 VLVKVLEFLKRYDHPWDVYVVFSVQEETGCLGALTGAYEINPDAAIVMDVTFASEPPFSD 236

Query: 242 KIVPELGKGPVMDVGPNINPKLRAFADEVAKKYEIPLQVEPSPRPTGTDANVMQINREGV 301
            I  ELGKGPV+ +GP ++  L     E+AKK+ + LQ E     +GT+ + +Q+ R GV
Sbjct: 237 HI--ELGKGPVIGLGPVVDRNLVQKIIEIAKKHNVSLQEEAVGGRSGTETDFVQLVRNGV 294

Query: 302 ATAVLSIPIRYMHSQVELADARDVDNTIKLAKALLEELK 340
            T+++SIP++YMH+ VE+ D RDV+   +L   +  EL+
Sbjct: 295 RTSLISIPLKYMHTPVEMVDPRDVEELARLLSLVAVELE 333


>pir||E75067 aminopeptidase m42 PAB2375 [imported] - Pyrococcus abyssi  (strain
           Orsay) >gi|5458947|emb|CAB50434.1| (AJ248287)
           aminopeptidase from family M42 [Pyrococcus abyssi]
           Length = 331
           
 Score =  183 bits (459), Expect = 3e-45
 Identities = 125/340 (36%), Positives = 190/340 (55%), Gaps = 22/340 (6%)

Query: 7   MQEIIEAPGVSGYEFLGIRDLVVDLLKEVADEVKVDKLGNVIAHFKGSSPRVMVSAHMDK 66
           ++E  + PG+SGYE   IR+ +++ +K+ AD  KVD +GN+I        R++  AHMD+
Sbjct: 7   LKEFTQIPGISGYEER-IRERIIEEIKDFAD-YKVDAIGNLIVELGEGDERLLFMAHMDE 64

Query: 67  IGVMVNHIDNNGYLHIVPIGGVLPETLVAQRIRFFTEKGERYGVVGVLPPHLRRGQQDKG 126
           IG+++  I N+G L    +GG+    L  + +   TE     GV+G +PPHL  G+    
Sbjct: 65  IGLLITGITNDGKLRFRKVGGIDDRLLYGRHVSVVTEDKIIDGVIGAIPPHLSLGK---- 120

Query: 127 GK--IDWDQIVVDVGASNKEEAEEMGFKVGTVGEFAPNFTRLSEHRFATPYLDDRICLYA 184
           GK  I W ++V+D+GA +KEEA E+  K      F  +F+ L+    +T  LDDR  + A
Sbjct: 121 GKDVIPWHELVIDIGAESKEEALEL-VKPLDFAVFKKHFSVLNGRYVSTRSLDDRFGVVA 179

Query: 185 MIEAARQLGEHE--ADVYIVASVQEEVGLRGARVASYAIDPEIGIAMDVTFAKQPHDKGK 242
           +IEA + L +H+    V    +VQEE+GL+GAR  +    PE   A+D +FA      G 
Sbjct: 180 LIEAIKDLVDHDLGGKVVFAFTVQEEIGLKGARFLANRYAPEYAFAID-SFACCNELTGD 238

Query: 243 IVPELGKGPVMDVGPNINPKLRAFADEV---AKKYEIPLQVEPSPRPTGTDANVMQINRE 299
           +  +LG GPV+    N     R  A +V   A+K +IP+Q+       GTDA+V Q   E
Sbjct: 239 V--KLGGGPVIRAVDNSAIYSRDLARKVLSIAEKNKIPIQI--GVTGGGTDASVFQ---E 291

Query: 300 GVATAVLSIPIRYMHSQVELADARDVDNTIKLAKALLEEL 339
                 LS+PI+Y+HS+VE+    D++N IKL +A+  EL
Sbjct: 292 RCKALALSVPIKYLHSEVEMLQINDLENLIKLIEAIALEL 331


>dbj|BAB06851.1| (AP001517) endo-1,4-beta-glucanase [Bacillus halodurans]
           Length = 361
           
 Score =  178 bits (446), Expect = 1e-43
 Identities = 113/349 (32%), Positives = 191/349 (54%), Gaps = 16/349 (4%)

Query: 5   KLMQEIIEAPGVSGYEFLGIRDLVVDLLKEVADEVKVDKLGNVIAHFKGSS--PRVMVSA 62
           ++++E+ +A G+ G E    RD++   ++  ADEV  DKLG+++A   G    P++MV+ 
Sbjct: 9   QMLKELTDANGIPGNE-REARDVMRKHIEPFADEVTTDKLGSLVAKKVGKEDGPKIMVAG 67

Query: 63  HMDKIGVMVNHIDNNGYLHIVPIGGVLPETLVAQRIRFFTEKGERYGVVGVLPPHLRRGQ 122
           H+D+IG MV  ID+ G+L    +GG   + ++AQR+   T+KG   GV+G  PPH+   +
Sbjct: 68  HLDEIGFMVTSIDDKGFLRFQTVGGWWEQVMLAQRVTVMTKKGNIPGVIGSKPPHILPAE 127

Query: 123 QDKGGKIDWDQIVVDVGASNKEEAEEMGFKVGTVGEFAPNFTRLSEHRF-ATPYLDDRIC 181
             K   +D   + +D+G ++KEEA E G + G       +FT +   ++      D+RI 
Sbjct: 128 ARK-KPVDKKDMFIDIGVASKEEALEFGVRPGDSIVPVCDFTVMKNEKYLMAKAWDNRIG 186

Query: 182 LYAMIEAARQL--GEHEADVYIVASVQEEVGLRGARVASYAIDPEIGIAMDVTFAKQPH- 238
               I+  R+L    H   VY V +VQEEVGLRGAR +++ I P+IG  +DV  A     
Sbjct: 187 CAIAIDVLRELKGTNHPNVVYGVGTVQEEVGLRGARTSAHYIKPDIGFGVDVGIAGDTPG 246

Query: 239 -DKGKIVPELGKGP---VMDVGPNINPKLRAFADEVAKKYEIPLQVEPSPRPTGTDANVM 294
             + + + ++G+GP   + D     +  LR F  ++A ++ IP Q + +    GTD+  +
Sbjct: 247 VTEKEALAKMGEGPQIVLYDASMVSHKGLRDFVTDIADEHNIPYQFD-AMAGGGTDSGAI 305

Query: 295 QINREGVATAVLSIPIRYMHSQVELADARDVDNTIKLAKALLEELKPMD 343
            +   GV    +++  RY+HS   +    D +NT+KL   ++E +K +D
Sbjct: 306 HLTANGVPALSITVATRYIHSHASILHRDDYENTVKL---IVEVIKKLD 351


>pir||B71165 hypothetical protein PH0519 - Pyrococcus horikoshii
           >gi|3256924|dbj|BAA29607.1| (AP000002) 332aa long
           hypothetical protein [Pyrococcus horikoshii]
           Length = 332
           
 Score =  172 bits (432), Expect = 5e-42
 Identities = 122/338 (36%), Positives = 186/338 (54%), Gaps = 18/338 (5%)

Query: 7   MQEIIEAPGVSGYEFLGIRDLVVDLLKEVADEVKVDKLGNVIAHFKGSSPRVMVSAHMDK 66
           +++  + PG+SGYE   IR+ ++  +K+ AD  KVD +GN+I        R++  AHMD+
Sbjct: 8   LKKFTQIPGISGYEER-IREEIIREIKDFAD-YKVDAIGNLIVELGEGEERILFMAHMDE 65

Query: 67  IGVMVNHIDNNGYLHIVPIGGVLPETLVAQRIRFFTEKGERYGVVGVLPPHLRRGQQDKG 126
           IG+++  I + G L    +GG+    L  + +   TEKG   GV+G  PPHL   ++DK 
Sbjct: 66  IGLLITGITDEGKLRFRKVGGIDDRLLYGRHVNVVTEKGILDGVIGATPPHLSL-ERDK- 123

Query: 127 GKIDWDQIVVDVGASNKEEAEEMGFKVGTVGEFAPNFTRLSEHRFATPYLDDRICLYAMI 186
             I W  +V+D+GA +KEEA E+  K      F  +F+ L+    +T  LDDR  + A+I
Sbjct: 124 SVIPWYDLVIDIGAESKEEALEL-VKPLDFAVFKKHFSVLNGKYVSTRGLDDRFGVVALI 182

Query: 187 EAARQLGEHEAD--VYIVASVQEEVGLRGARVASYAIDPEIGIAMDVTFAKQPHDKGKIV 244
           EA + L +HE +  V    +VQEEVGL+GA+  +    P+   A+D +FA      G + 
Sbjct: 183 EAIKDLVDHELEGKVIFAFTVQEEVGLKGAKFLANHYYPQYAFAID-SFACCSPLTGDV- 240

Query: 245 PELGKGPVMDVGPNINPKLRAFADEV---AKKYEIPLQVEPSPRPTGTDANVMQINREGV 301
            +LGKGPV+    N     R  A +V   A+K  I +Q+       GTDA+  Q   +  
Sbjct: 241 -KLGKGPVIRAVDNSAIYSRDLARKVWSIAEKNGIEIQI--GVTGGGTDASAFQ---DRS 294

Query: 302 ATAVLSIPIRYMHSQVELADARDVDNTIKLAKALLEEL 339
            T  LS+PI+Y+HS+VE     D++  +KL +AL  EL
Sbjct: 295 KTLALSVPIKYLHSEVETLHLNDLEKLVKLIEALAFEL 332


>pir||D72301 endoglucanase - Thermotoga maritima (strain MSB8)
           >gi|4981592|gb|AAD36127.1|AE001765_6 (AE001765)
           endoglucanase [Thermotoga maritima]
           Length = 331
           
 Score =  168 bits (420), Expect = 1e-40
 Identities = 114/331 (34%), Positives = 191/331 (57%), Gaps = 13/331 (3%)

Query: 5   KLMQEIIEAPGVSGYEFLGIRDLVVDLLKEVADEVKVDKLGNVIAHFKGSSPRVMVSAHM 64
           +L++++ EA G SG E   +R ++++ L+   D  ++D LGN+I        +V++ AH+
Sbjct: 3   ELIRKLTEAFGPSGREE-EVRSIILEELEGHIDGHRIDGLGNLIVWKGSGEKKVILDAHI 61

Query: 65  DKIGVMVNHIDNNGYLHIVPIGGVLPETLVAQRIRFFTEKGERYGVVGVLPPHLRRGQQD 124
           D+IGV+V ++D+ G+L I P+GGV P  L+ +RIRF  E G   GVVG +       +Q+
Sbjct: 62  DEIGVVVTNVDDKGFLTIEPVGGVSPYMLLGKRIRF--ENG-TIGVVG-MEGETTEERQE 117

Query: 125 KGGKIDWDQIVVDVGASNKEEAEEMGFKVGTVGEFAPNFTRLSEHRFATPYLDDRICLYA 184
              K+ +D++ +D+GA+++EEA++M   +G+ G +   F  +S  ++ +  +DDRI    
Sbjct: 118 NVRKLSFDKLFIDIGANSREEAQKM-CPIGSFGVYDSGFVEVS-GKYVSKAMDDRIGCAV 175

Query: 185 MIEAARQLGEHEADVYIVASVQEEVGLRGARVASYAIDPEIGIAMDVT-FAKQPHDKGKI 243
           ++E  +++ +    +Y V SVQEEVGL GA VA Y +  +  IA+DVT  A  P    + 
Sbjct: 176 IVEVFKRI-KPAVTLYGVFSVQEEVGLVGASVAGYGVPADEAIAIDVTDSADTPKAIKRH 234

Query: 244 VPELGKGPVMDVGPNINPKLRAFAD---EVAKKYEIPLQVEPSPRPTGTDANVMQINREG 300
              L  GP + V    +   +   +   E+A+K++I  Q+E      GT+A   Q  REG
Sbjct: 235 AMRLSGGPALKVKDRASISSKRILENLIEIAEKFDIKYQMEVLTF-GGTNAMGYQRTREG 293

Query: 301 VATAVLSIPIRYMHSQVELADARDVDNTIKL 331
           + +A +SIP RY+HS  E+    DV+ T+ L
Sbjct: 294 IPSATVSIPTRYVHSPSEMIAPDDVEATVDL 324


>pir||A72609 probable deblocking aminopeptidase APE1335 - Aeropyrum pernix
           (strain K1) >gi|5105013|dbj|BAA80327.1| (AP000061) 339aa
           long hypothetical deblocking aminopeptidase [Aeropyrum
           pernix]
           Length = 339
           
 Score =  166 bits (415), Expect = 5e-40
 Identities = 105/337 (31%), Positives = 180/337 (53%), Gaps = 15/337 (4%)

Query: 7   MQEIIEAPGVSGYEFLGIRDLVVDLLKEVADEVKVDKLGNVIAHFKGSSPRVMVSAHMDK 66
           ++E++  PG SG+E L +R +VV  L+E+  +  VD+LGNV+ +  G  PR++ +AHMD+
Sbjct: 5   LRELVFTPGPSGFEDL-VRSVVVSRLRELGLDPVVDELGNVVVNPSGGEPRLLAAAHMDE 63

Query: 67  IGVMVNHIDNNGYLHIVPIGGVLPETLVAQRIRFFTEKGERY-GVVGVLPPHLRRGQQDK 125
           +G ++  + ++G L    +GG+    L  Q +    + G R  GV+G+ PPHL+  + + 
Sbjct: 64  LGFVITGVGDDGLLAFRKLGGIDDRILPGQHVEILLDGGARIEGVIGITPPHLQLDRGEA 123

Query: 126 GGKIDWDQIVVDVGASNKEEAEEMGFKVGTVGEFAPNFTRLSEHR-FATPYLDDRICLYA 184
              + W ++ +D+GA ++ EAEE+G K      F  +++ L+  R  A+   DDR  +  
Sbjct: 124 EKPLRWHELRIDIGAQSRAEAEELGVKPLQPAVFKKHWSTLAGGRALASRGFDDRAGVAL 183

Query: 185 MIEAARQLGEHEAD---VYIVASVQEEVGLRGARVASYAIDPEIGIAMDVTFAKQPHDKG 241
           ++E A+++ E   D   + +  +VQEEVGLRGA   +  + P+  +A+D      P   G
Sbjct: 184 LLELAKRIAEGRVDAGGIALAWTVQEEVGLRGASYVASRMKPKAFLAVDTMACCHPAVTG 243

Query: 242 KIVPELGKGPVMDVGPN--INPK-LRAFADEVAKKYEIPLQVEPSPRPTGTDANVMQINR 298
              P  G GPV+    N  I P+ L    +E A+   + LQ   +    G   +     R
Sbjct: 244 HTRP--GGGPVVRALDNQHITPRWLVELLEEAARSAGLELQYATA----GGTTDAAAFQR 297

Query: 299 EGVATAVLSIPIRYMHSQVELADARDVDNTIKLAKAL 335
            GV +A + IP++Y HS  E+    D++  +KL + L
Sbjct: 298 TGVPSAAIGIPLKYTHSTAEVLYLSDLEGALKLLEHL 334


>sp|P32153|FRVX_ECOLI PUTATIVE FRV OPERON PROTEIN FRVX >gi|541108|pir||S40842 probable
           frv operon protein FrvX - Escherichia coli
           >gi|305002|gb|AAB03031.1| (L19201) ORF_f356 [Escherichia
           coli] >gi|1790332|gb|AAC76880.1| (AE000465) frv operon
           protein [Escherichia coli K12]
           Length = 356
           
 Score =  165 bits (413), Expect = 8e-40
 Identities = 110/342 (32%), Positives = 175/342 (51%), Gaps = 11/342 (3%)

Query: 5   KLMQEIIEAPGVSGYEFLGIRDLVVDLLKEVADEVKVDKLGNVIAHFKGSSPRVMVSAHM 64
           +L+Q++ EA  VSG E   +RD++++ L+   +E+  D LG+ +A      P+V V  HM
Sbjct: 4   ELLQQLCEASAVSGDE-QEVRDILINTLEPCVNEITFDGLGSFVARKGNKGPKVAVVGHM 62

Query: 65  DKIGVMVNHIDNNGYLHIVPIGGVLPETLVAQRIRFFTEKGERY-GVVGVLPPHLRRGQQ 123
           D++G MV HID +G+L    IGG   ++++  R+   T KG +  GV+G + PH    +Q
Sbjct: 63  DEVGFMVTHIDESGFLRFTTIGGWWNQSMLNHRVTIRTHKGVKIPGVIGSVAPHALTEKQ 122

Query: 124 DKGGKIDWDQIVVDVGASNKEEAEEMGFKVGTVGEFAPNFTRLSEHRFATPYLDDRICLY 183
            K   + +D++ +D+GA+++EE E+ G ++G       NF    E +     LD+RI   
Sbjct: 123 -KQQPLSFDEMFIDIGANSREEVEKRGVEIGNFISPEANFACWGEDKVVGKALDNRIGCA 181

Query: 184 AMIEAARQLGEHEADVYIVASVQEEVGLRGARVASYAIDPEIGIAMDVTFAKQPH--DKG 241
            M E  + +   E  +Y V SV+EEVGLRGA+ ++  I P++ I +D   A      D  
Sbjct: 182 MMAELLQTVNNPEITLYGVGSVEEEVGLRGAQTSAEHIKPDVVIVLDTAVAGDVPGIDNI 241

Query: 242 KIVPELGKGP---VMDVGPNINPKLRAFADEVAKKYEIPLQVEPSPRPTG-TDANVMQIN 297
           K   +LG+GP   + D     N KL A     A   ++PLQ   S   TG TD     + 
Sbjct: 242 KYPLKLGQGPGLMLFDKRYFPNQKLVAALKSCAAHNDLPLQF--STMKTGATDGGRYNVM 299

Query: 298 REGVATAVLSIPIRYMHSQVELADARDVDNTIKLAKALLEEL 339
             G     L +P RY+H+   +    D +  + L +  L  L
Sbjct: 300 GGGRPVVALCLPTRYLHANSGMISKADYEALLTLIRGFLTTL 341


>pir||A69984 endo-1,4-beta-glucanase homolog ysdC - Bacillus subtilis
           >gi|1770012|emb|CAA99585.1| (Z75208) hypothetical
           protein [Bacillus subtilis] >gi|2635347|emb|CAB14842.1|
           (Z99118) similar to endo-1,4-beta-glucanase [Bacillus
           subtilis]
           Length = 361
           
 Score =  164 bits (412), Expect = 1e-39
 Identities = 106/344 (30%), Positives = 184/344 (52%), Gaps = 13/344 (3%)

Query: 6   LMQEIIEAPGVSGYEFLGIRDLVVDLLKEVADEVKVDKLGNVIAHFKGSS--PRVMVSAH 63
           +++++ +A G+ G E   +R ++   ++  ADEV  D+LG++IA   G+   P++M++ H
Sbjct: 10  MLKDLTDAKGIPGNE-REVRQVMKSYIEPFADEVTTDRLGSLIAKKTGAENGPKIMIAGH 68

Query: 64  MDKIGVMVNHIDNNGYLHIVPIGGVLPETLVAQRIRFFTEKGERYGVVGVLPPHLRRGQQ 123
           +D++G MV  I + G++    +GG   + ++AQR+   T+KGE  GV+G  PPH+   + 
Sbjct: 69  LDEVGFMVTQITDKGFIRFQTVGGWWAQVMLAQRVTIVTKKGEITGVIGSKPPHILSPEA 128

Query: 124 DKGGKIDWDQIVVDVGASNKEEAEEMGFKVGTVGEFAPNFTRLSEHRF-ATPYLDDRICL 182
            K   ++   + +D+GAS++EEA E G   G +      FT ++  +F      D+RI  
Sbjct: 129 RK-KSVEIKDMFIDIGASSREEALEWGVLPGDMIVPHFEFTVMNNEKFLLAKAWDNRIGC 187

Query: 183 YAMIEAARQL--GEHEADVYIVASVQEEVGLRGARVASYAIDPEIGIAMDVTFAKQPH-- 238
              I+  R L   +H   VY V +VQEEVGLRGA+ A++ I P+I   +DV  A      
Sbjct: 188 AIAIDVLRNLQNTDHPNIVYGVGTVQEEVGLRGAKTAAHTIQPDIAFGVDVGIAGDTPGI 247

Query: 239 DKGKIVPELGKGP---VMDVGPNINPKLRAFADEVAKKYEIPLQVEPSPRPTGTDANVMQ 295
            + +   ++GKGP   V D     +  LR      A++  IP Q + +    GTD+  + 
Sbjct: 248 SEKEAQSKMGKGPQIIVYDASMVSHKGLRDAVVATAEEAGIPYQFD-AIAGGGTDSGAIH 306

Query: 296 INREGVATAVLSIPIRYMHSQVELADARDVDNTIKLAKALLEEL 339
           +   GV    ++I  RY+H+   +    D +N +KL   ++++L
Sbjct: 307 LTANGVPALSITIATRYIHTHAAMLHRDDYENAVKLITEVIKKL 350


>pir||E75542 probable endoglucanase - Deinococcus radiodurans (strain R1)
           >gi|6457903|gb|AAF09817.1|AE001885_1 (AE001885)
           endoglucanase, putative [Deinococcus radiodurans]
           Length = 375
           
 Score =  164 bits (411), Expect = 1e-39
 Identities = 115/319 (36%), Positives = 173/319 (54%), Gaps = 18/319 (5%)

Query: 33  KEVADEVKV--DKLGNVIAHF-KGSSPRVMVSAHMDKIGVMVNHIDNNGYLHIVPIGGVL 89
           KE A   +V  D  G+V A     + P + +  H+D+IG++V+H+D+ G+L ++ +GG  
Sbjct: 57  KEAATFARVSEDHYGSVYAELGPENGPAIALMGHLDEIGLIVSHVDDKGHLSVLGVGGWD 116

Query: 90  PETLVAQRIRFFTEKGERYGVVGVLPPHLRRGQQ-DKGGKIDWDQIVVDVGASNKEEAEE 148
           P+ LV QRIR     G+  GVVG    H+   ++  K  K++   + +DVG     +A+E
Sbjct: 117 PQVLVGQRIRLLAPGGDLLGVVGKKAIHVMEAEERTKASKLE--DLWIDVGL----DADE 170

Query: 149 MGFKV--GTVGEFAPNFTRLSEHRFATPYLDDRICLYAMIEAARQLGEHEADVYIVA--S 204
           +  KV  GT G        +  ++  +  LD+R+  + ++EA R L + E    IVA  +
Sbjct: 171 VKAKVPVGTYGVIEQGPVMVG-NKVVSRALDNRVGAFIVLEALRALKDVELKHRIVAVGT 229

Query: 205 VQEEVGLRGARVASYAIDPEIGIAMDVTF-AKQP--HDKGKIVPELGKGPVMDVGPNINP 261
            QEE+G+ GA+ ++Y +DP  GIA+DVT    QP   +K   V   G G  + VGP  NP
Sbjct: 230 SQEEIGVFGAQTSAYRLDPVAGIAVDVTHETDQPGVSEKKYGVAPFGSGANLSVGPMTNP 289

Query: 262 KLRAFADEVAKKYEIPLQVEPSPRPTGTDANVMQINREGVATAVLSIPIRYMHSQVELAD 321
            L     E A +  IP  +  S R TGTDA+ + + R GV T V+SIP RYMHS  E+ D
Sbjct: 290 TLLRQLTEAAGRENIPYTLSASGRYTGTDADALTLVRAGVPTGVVSIPNRYMHSPSEMVD 349

Query: 322 ARDVDNTIKLAKALLEELK 340
            RDV   I +  A +  L+
Sbjct: 350 ERDVKACIDILAAWIRGLE 368


>pir||B69998 endo-1,4-beta-glucanase homolog ytoP - Bacillus subtilis
           >gi|2293210|gb|AAC00288.1| (AF008220) YtoP [Bacillus
           subtilis] >gi|2635470|emb|CAB14964.1| (Z99119) similar
           to endo-1,4-beta-glucanase [Bacillus subtilis]
           Length = 357
           
 Score =  160 bits (401), Expect = 2e-38
 Identities = 107/327 (32%), Positives = 175/327 (52%), Gaps = 12/327 (3%)

Query: 6   LMQEIIEAPGVSGYEFLGIRDLVVDLLKEVADEVKVDKLGNVIAHFKGS--SPRVMVSAH 63
           L Q + + PG  G E   +R  +   L + AD++  D+LG+V    +G+  +PR+MV+ H
Sbjct: 8   LFQTLTQLPGAPGNEHQ-VRAFMKQELAKYADDIVQDRLGSVFGVRRGAEDAPRIMVAGH 66

Query: 64  MDKIGVMVNHIDNNGYLHIVPIGGVLPETLVAQRIRFFTEKGERYGVVGVLPPHLRRGQQ 123
           MD++G MV  I +NG L    +GG   + L+AQR+   T+ G   GV+  +PPHL    Q
Sbjct: 67  MDEVGFMVTSITDNGLLRFQTLGGWWSQVLLAQRVEIQTDNGPVPGVISSIPPHLLTDAQ 126

Query: 124 DKGGKIDWDQIVVDVGASNKEEAEEMGFKVG-TVGEFAPNFTRLSEHRFATPYLDDRICL 182
            +   +D   +++D+GA +KE+A ++G + G  +    P  T  +E +  +   D+R   
Sbjct: 127 -RNRPMDIKNMMIDIGADDKEDAIKIGIRPGQQIVPVCPFTTMANEKKILSKAWDNRYGC 185

Query: 183 YAMIEAARQLGEHEA--DVYIVASVQEEVGLRGARVASYAIDPEIGIAMDVTFAKQPHDK 240
              IE  ++L   E    +Y  A+VQEEVGLRGA+ AS+ I P++  A+D + A      
Sbjct: 186 GLSIELLKELHGKELPNTLYAGATVQEEVGLRGAQTASHMIKPDLFFALDASPANDMSGD 245

Query: 241 GKIVPELGKG---PVMDVGPNINPKLRAFADEVAKKYEIPLQVEPSPRPTGTDANVMQIN 297
                +LGKG    ++D    ++  +R F  ++A+ ++IP Q   S    GTDA  + I+
Sbjct: 246 KNEFGQLGKGFLLRILDRTTVMHRGMREFVLDMAETHDIPYQYFVS--GGGTDAGKVHIS 303

Query: 298 REGVATAVLSIPIRYMHSQVELADARD 324
             GV +AV+ I  RY+H+   +    D
Sbjct: 304 NSGVPSAVIGICSRYIHTNATIIHIDD 330


>sp|P39366|SGCX_ECOLI PUTATIVE SGC REGION PROTEIN SGCX >gi|7435572|pir||C65244
           hypothetical 41.7 kD protein in fecI-fimB intergenic
           region - Escherichia coli (strain K-12)
           >gi|2367373|gb|AAC77261.1| (AE000501) putative
           lyase/synthase [Escherichia coli K12]
           Length = 383
           
 Score =  151 bits (378), Expect = 1e-35
 Identities = 103/342 (30%), Positives = 172/342 (50%), Gaps = 19/342 (5%)

Query: 10  IIEAPGVSGYEFLGIRDLVVDLLKEVADEVKVDKLGNVIAHFKGSSP---RVMVSAHMDK 66
           +++   +SG+E   + D+++   +  A EV  D+LGNV+A +    P   R+M+ AHMD+
Sbjct: 22  LLQHNAISGHEN-AVADVMLCEFRRQAKEVWRDRLGNVVARYGSDKPDALRLMIFAHMDE 80

Query: 67  IGVMVNHIDNNGYLHIVPIGGVLPETLVAQRIRFFTEKGERYGVVGVLPPHLRRGQQDKG 126
           +G MV  I+ +G+L    +GG    T+    +    +KG   G +G+   H  +G  ++ 
Sbjct: 81  VGFMVRKIEPSGFLRFERVGGPAQVTMAGSIVTLTGDKGPVMGCIGIKSYHFAKG-DERT 139

Query: 127 GKIDWDQIVVDVGASNKEEAEEMGFKVGTVGEFAPNFTRLSEHRFATPYLDDRICLYAMI 186
                D++ +D+GA +K++A  MG +VGT          L+     +  LDDR+   A++
Sbjct: 140 QSPSVDKLWIDIGAKDKDDAIRMGIQVGTPVTLYNPPQLLANDLVCSKALDDRLGCTALL 199

Query: 187 EAARQLGEHEAD--VYIVASVQEEVGLRGARVASYAIDPEIGIAMDVT---FAKQPHDKG 241
             A  +   E D  VY+VASVQEE  +RG       + P++ I +D+T        HD  
Sbjct: 200 GVADAISTMELDIAVYLVASVQEEFNIRGIVPVLRRVKPDLAIGIDITPSCDTPDLHDYS 259

Query: 242 KIVPELGKGPV--------MDVGPNINPKLRAFADEVAKKYEIPLQVEPSPRPTGTDANV 293
           ++    G G             G    P+L    ++ A ++ IP+Q E +P    T+   
Sbjct: 260 EVRINQGVGITCLNYHGRGTLAGLITPPRLIRMLEQTALEHNIPVQREVAPGVI-TETGY 318

Query: 294 MQINREGVATAVLSIPIRYMHSQVELADARDVDNTIKLAKAL 335
           +Q+ ++G+  A LSIP RY HS  E+A  RD+ + I+L  AL
Sbjct: 319 IQVEQDGIPCASLSIPCRYTHSPAEVASLRDLTDCIRLLTAL 360


>dbj|BAB06976.1| (AP001518) endo-1,4-beta-glucanase [Bacillus halodurans]
           Length = 357
           
 Score =  151 bits (378), Expect = 1e-35
 Identities = 110/342 (32%), Positives = 178/342 (51%), Gaps = 16/342 (4%)

Query: 6   LMQEIIEAPGVSGYEFLGIRDLVVDLLKEVADEVKVDKLGNVIAHFKGSS--PRVMVSAH 63
           L + + E  G  G+E   IR  V   L++  +E+  D+LG++    +G+   P+VMV+ H
Sbjct: 8   LFKTLTELQGAPGFEH-HIRRFVRGELEKYTNEIVQDRLGSIFGVKRGNEQGPKVMVAGH 66

Query: 64  MDKIGVMVNHIDNNGYLHIVPIGGVLPETLVAQRIRFFTEKGERYGVVGVLPPHLRRGQQ 123
           MD++G MV  I+  G +    +GG   + L+AQR++  T++G   GV+G  PPHL    Q
Sbjct: 67  MDEVGFMVTSINEKGLIRFQTLGGWWSQVLLAQRVQIMTDEGPVIGVIGSTPPHLLEEAQ 126

Query: 124 DKGGKIDWDQIVVDVGASNKEEAEEMGFKVG-TVGEFAPNFTRLSEHRFATPYLDDRICL 182
            K   +D   + +D+GA +KE+A+++G K G  +    P     +E +      D+R  +
Sbjct: 127 RK-KPMDVKNMYIDIGADDKEDAQKIGIKPGQQIVPICPFTPLANEKKIMAKAWDNRYGV 185

Query: 183 YAMIEAARQL-GEHEADV-YIVASVQEEVGLRGARVASYAIDPEIGIAMDVTFAKQPHDK 240
              IE  ++L GE   ++ Y  A+VQEEVGLRGA  ++  I+P+I  A+D + A      
Sbjct: 186 GLAIELLKELQGETTPNILYSGATVQEEVGLRGAATSAQMIEPDIFYALDASPANDATAG 245

Query: 241 GKIVPELGKGPVMDVGPN---INPKLRAFADEVAKKYEIPLQVEPSPRPTGTDANVMQIN 297
                +LGKG ++ +       +  +R F  + A+   IP Q   S    GTDA  + ++
Sbjct: 246 KDAFGQLGKGALVRIYDRTMVTHRGIRDFVLDTAETENIPYQFFIS--QGGTDAGRVHLS 303

Query: 298 REGVATAVLSIPIRYMHSQVELADARDVDNTIKLAKALLEEL 339
             GV +AV+ I  RY+H+   +    D       AKALL +L
Sbjct: 304 GNGVPSAVIGICSRYIHTAASIIHVDD----YAAAKALLVKL 341


>gb|AAG19796.1| (AE005064) endoglucanase; CelM [Halobacterium sp. NRC-1]
           Length = 353
           
 Score =  150 bits (375), Expect = 2e-35
 Identities = 105/325 (32%), Positives = 159/325 (48%), Gaps = 10/325 (3%)

Query: 7   MQEIIEAPGVSGYEFLGIRDLVVDLLKEVADEVKVDKLGNVIAHFKGSSPRVMVSAHMDK 66
           + E++     +G+E    R + V+ + + AD V+ D  GN +A  +G +P V  + H D+
Sbjct: 9   LDELLAVHSPTGHEAAAQR-VWVEYVSQYADRVETDAYGNAVAVAEGGAPAVAFTGHADE 67

Query: 67  IGVMVNHIDNNGYLHIVPIGGVLPETLVAQRIRFFTEKGERYGVVGVLPPHLRRGQQDKG 126
           IG  V  I   G++ I PIGG+        ++R  T+ G   GV+G    HLR   +D G
Sbjct: 68  IGFAVAEITEGGFVRIAPIGGLDASVTRGSQVRIETDDGPVNGVIGQAAVHLRDHSED-G 126

Query: 127 GKIDWDQIVVDVGASNKEEAEEMGFKVGTVGEFAPNFTRLSEHRFATPYLDDRICLYAMI 186
                 +  VD+GA++ ++A +    VG  G        L+  R     LD+R  L+   
Sbjct: 127 AAPSVTEQYVDIGAADGDDARDR-VSVGDPGVLVSEPRELAGGRLNARSLDNRTGLWVAA 185

Query: 187 EAARQLGEHEAD--VYIVASVQEEVGLRGARVASYAIDPEIGIAMDVTFAKQ----PHDK 240
           E  R+  E + D  VY V++V EE+G RGAR+  + +D +  +A DVT A      P ++
Sbjct: 186 EGFRRAVERDVDATVYAVSTVHEEIGTRGARMVGFDLDVDAVVAADVTHAADDPMYPAER 245

Query: 241 GKIVPELGKGPVMDVGPNINPKLRAFADEVAKKYEIPLQVEPSPRPTGTDANVMQINREG 300
              V  LG GPV+  G   +P + +   + A      LQV      TGTDA+       G
Sbjct: 246 ASTV-ALGDGPVVMRGGTNHPVVVSALRDAAADAGASLQVAAHRISTGTDADAFGTAGGG 304

Query: 301 VATAVLSIPIRYMHSQVELADARDV 325
           V TA L IP RYMH+  E+ D  D+
Sbjct: 305 VPTADLGIPNRYMHTPAEVVDLADL 329


>pir||S56530 hypothetical protein f383 - Escherichia coli
           >gi|537146|gb|AAA97201.1| (U14003) ORF_f383 [Escherichia
           coli]
           Length = 383
           
 Score =  149 bits (372), Expect = 5e-35
 Identities = 102/342 (29%), Positives = 171/342 (49%), Gaps = 19/342 (5%)

Query: 10  IIEAPGVSGYEFLGIRDLVVDLLKEVADEVKVDKLGNVIAHFKGSSP---RVMVSAHMDK 66
           +++   +SG+E   + D+++   +  A EV  D+LGNV+A +    P   R+M+ AHMD+
Sbjct: 22  LLQHNAISGHEN-AVADVMLCEFRRQAKEVWRDRLGNVVARYGSDKPDALRLMIFAHMDE 80

Query: 67  IGVMVNHIDNNGYLHIVPIGGVLPETLVAQRIRFFTEKGERYGVVGVLPPHLRRGQQDKG 126
           +G MV  I+ +G+L    +GG    T+    +    +KG   G +G+   H  +   ++ 
Sbjct: 81  VGFMVRKIEPSGFLRFERVGGPAQVTMAGSIVTLTGDKGPVMGCIGIKSYHFAKA-DERT 139

Query: 127 GKIDWDQIVVDVGASNKEEAEEMGFKVGTVGEFAPNFTRLSEHRFATPYLDDRICLYAMI 186
                D++ +D+GA +K++A  MG +VGT          L+     +  LDDR+   A++
Sbjct: 140 QSPSVDKLWIDIGAKDKDDAIRMGIQVGTPVTLYNPPQLLANDLVCSKALDDRLGCTALL 199

Query: 187 EAARQLGEHEAD--VYIVASVQEEVGLRGARVASYAIDPEIGIAMDVT---FAKQPHDKG 241
             A  +   E D  VY+VASVQEE  +RG       + P++ I +D+T        HD  
Sbjct: 200 GVADAISTMELDIAVYLVASVQEEFNIRGIVPVLRRVKPDLAIGIDITPSCDTPDLHDYS 259

Query: 242 KIVPELGKGPV--------MDVGPNINPKLRAFADEVAKKYEIPLQVEPSPRPTGTDANV 293
           ++    G G             G    P+L    ++ A ++ IP+Q E +P    T+   
Sbjct: 260 EVRINQGVGITCLNYHGRGTLAGLITPPRLIRMLEQTALEHNIPVQREVAPGVI-TETGY 318

Query: 294 MQINREGVATAVLSIPIRYMHSQVELADARDVDNTIKLAKAL 335
           +Q+ ++G+  A LSIP RY HS  E+A  RD+ + I+L  AL
Sbjct: 319 IQVEQDGIPCASLSIPCRYTHSPAEVASLRDLTDCIRLLTAL 360


>pir||E65012 hypothetical protein b2384 - Escherichia coli (strain K-12)
           >gi|1788727|gb|AAC75443.1| (AE000326) orf, hypothetical
           protein [Escherichia coli K12]
           >gi|1799795|dbj|BAA16254.1| (D90868) PUTATIVE FRV OPERON
           PROTEIN FRVX. [Escherichia coli]
           Length = 345
           
 Score =  148 bits (369), Expect = 1e-34
 Identities = 104/345 (30%), Positives = 171/345 (49%), Gaps = 19/345 (5%)

Query: 2   VDWKLMQEIIEAPGVSGYEFLGIRDLVVDLLKEVADEVKVDKLGNVIAHFKGSS-PRVMV 60
           +D  L++ + EA  ++  E   +R ++++    +  EV+ D LG+V+     S+ P+VM+
Sbjct: 1   MDLSLLKALSEADAIASSE-QEVRQILLEEADRLQKEVRFDGLGSVLIRLNESTGPKVMI 59

Query: 61  SAHMDKIGVMVNHIDNNGYLHIVPIGGVLPETLVAQRIRFFTEKGERYGVVGVLPPHLRR 120
            AHMD++G MV  I   G + ++P+G V       Q +R  T   E   + G+L      
Sbjct: 60  CAHMDEVGFMVRSISREGAIDVLPVGNVRMAARQLQPVRITTR--EECKIPGLL------ 111

Query: 121 GQQDKGGKIDWDQIVVDVGASNKEEAEEMGFKVGTVGEFAPNFTRLSEHRFATPYLDDRI 180
              D+ G  D   + VD+GA + +E  + G + G    F   F  L   R      DDR+
Sbjct: 112 -DGDRQGN-DVSAMRVDIGARSYDEVMQAGIRPGDRVTFDTTFQVLPHQRVMGKAFDDRL 169

Query: 181 CLYAMIEAARQLGEHE--ADVYIVASVQEEVGLRGARVASYAIDPEIGIAMDVTFAKQPH 238
             Y ++   R+L + E  A+V++VAS  EEVGLRG + A+ A+ P++ I +D     +  
Sbjct: 170 GCYLLVTLLRELHDAELPAEVWLVASSSEEVGLRGGQTATRAVSPDVAIVLDTACWAKNF 229

Query: 239 DKGKI-VPELGKGPVM---DVGPNINPKLRAFADEVAKKYEIPLQVEPSPRPTGTDANVM 294
           D G     ++G GP++   D      PKL A+ + VA +  +PLQ +      GTD   +
Sbjct: 230 DYGAANHRQIGNGPMLVLSDKSLIAPPKLTAWVETVAAEIGVPLQADMFSN-GGTDGGAV 288

Query: 295 QINREGVATAVLSIPIRYMHSQVELADARDVDNTIKLAKALLEEL 339
            +   GV T V+    R+ H    +AD RD+    +L  AL++ L
Sbjct: 289 HLTGTGVPTVVMGPATRHGHCAASIADCRDILQMQQLLSALIQRL 333


>pir||C72301 endoglucanase - Thermotoga maritima (strain MSB8)
           >gi|4981591|gb|AAD36126.1|AE001765_5 (AE001765)
           endoglucanase [Thermotoga maritima]
           Length = 339
           
 Score =  144 bits (359), Expect = 2e-33
 Identities = 106/345 (30%), Positives = 175/345 (50%), Gaps = 17/345 (4%)

Query: 7   MQEIIEAPGVSGYEFLGIRDLVVDLLKEVADEVKVDKLGNVIAHFKG--SSPRVMVSAHM 64
           ++E+   PGVSG E   +RD +   ++ + D +  D LGN+IA  +G  SS +++VSAHM
Sbjct: 3   LKELSMMPGVSGDEGK-VRDFIKSKIEGLVDNLYTDVLGNLIALKRGRDSSKKLLVSAHM 61

Query: 65  DKIGVMVNHIDNNGYLHIVPIGGVLPETLVAQRIRFFTEKGERYGVVGVLPPHLRRGQQD 124
           D++G +V+ I+ +G +  +P+GGV P  L  + ++    KG    V+G  P HL+R +++
Sbjct: 62  DEVGFVVSKIEKDGKVSFLPVGGVDPRILPGKVVQVKNLKG----VIGYRPIHLQRDEEN 117

Query: 125 KGGKIDWDQIVVDVGASNKEEAEEMGFKVGTVGEFAPNFTRLSEHRFATPYLDDRICLYA 184
              +  ++ + +D G S+ +EA++    +G    F  ++   +       + DDR     
Sbjct: 118 TPPR--FENLRIDFGFSSADEAKKY-VSIGDYVSFVSDYIEKNGRAVGKAF-DDRAGCSV 173

Query: 185 MIEAARQLGEHEADVYIVASVQEEVGLRGARVASYAIDPEIGIAMDVTFA--KQPHDKGK 242
           +I+          D Y V +VQEE GLRG+ V    + P   I ++ T A      ++ K
Sbjct: 174 LIDVLESGVSPAYDTYFVFTVQEETGLRGSAVVVEQLKPTCAIVVETTTAGDNPELEERK 233

Query: 243 IVPELGKGPVMDV---GPNINPKLRAFADEVAKKYEIPLQVEPSPRPTGTDANVMQINRE 299
               LG GP +     G  I  ++     + AK  +IP Q++      GTDA        
Sbjct: 234 WATHLGDGPAITFYHRGYVIPKEIFQTIVDTAKNNDIPFQMKRRTAG-GTDAGRYARTAY 292

Query: 300 GVATAVLSIPIRYMHSQVELADARDVDNTIKLAKALLEELKPMDL 344
           GV   V+S P RY+HS   + D  D +NT KL K L+EE K +++
Sbjct: 293 GVPAGVISTPARYIHSPNSIIDLNDYENTKKLIKVLVEEGKIVEV 337


>pir||D82912 Endo-1,4-beta-glucanase UU280 [imported] - Ureaplasma urealyticum
           >gi|6899252|gb|AAF30689.1|AE002124_11 (AE002124)
           Endo-1,4-beta-glucanase [Ureaplasma urealyticum]
           Length = 363
           
 Score =  135 bits (336), Expect = 8e-31
 Identities = 99/339 (29%), Positives = 170/339 (49%), Gaps = 13/339 (3%)

Query: 9   EIIEAPGVSGYEFLGIRDLVVDLLKEVADEVKVDKLGNVIAHFKGSS--PRVMVSAHMDK 66
           E +E  G+S +E      L   L K+   + + D LG++I     S+  P+++++ HMD+
Sbjct: 15  EYMEIYGMSRHEERVASKLKASL-KDAGVDYERDNLGSIIFKKTNSNKGPKILIATHMDE 73

Query: 67  IGVMVNHIDNNGYLHIVPIGGVLPETLVAQRIRFFTEKGERY-GVVGVLPPHLRRGQQDK 125
           +G +V  I +NG L +  +GGV P   +    + + ++  +Y GV G    H+    + +
Sbjct: 74  VGFVVQQILDNGQLLLSMVGGVWPNIAIGSVAKVYVDEQRQYTGVFGHTSIHILE-PEAR 132

Query: 126 GGKIDWDQIVVDVGASNKEEAEEMGFKVGT-VGEFAPNFTRLSEHRFATPYLDDRICLYA 184
              +   ++ VD G ++K++A ++G ++GT V    P      E+      +D+R+ +  
Sbjct: 133 SKAVPVKELFVDCGFNSKQQAIDLGIEIGTEVYMEGPTLNFYDENYIVGKAVDNRVSVAV 192

Query: 185 MIEAARQLGEH--EADVYIVASVQEEVGLRGARVASYAIDPEIGIAMDVTFAKQPHDKGK 242
           +      L +       Y  A+VQEEVGLRGA+     + P+IGI +D T +   +   +
Sbjct: 193 LDLLIHSLKDKVIPNQTYFAATVQEEVGLRGAKTVVSKVKPDIGIVIDTTTSHDTYKCPE 252

Query: 243 IVPELGKG---PVMDVGPNINPKLRAFADEVAKKYEIPLQVEPSPRPTGTDANVMQIN-R 298
              +L  G    + D G  +NPKL  + +E+A K+ IPL  +   R  GTDA  +Q    
Sbjct: 253 GDTKLNDGVCIRIKDGGTLVNPKLVKYFEELAIKHNIPL-YKYVARGGGTDAEELQYGPN 311

Query: 299 EGVATAVLSIPIRYMHSQVELADARDVDNTIKLAKALLE 337
            GV T  LSIP RY+H+ + +A  +D+     L +  LE
Sbjct: 312 GGVLTIGLSIPQRYLHAPIGVATVKDIKAAFDLVREFLE 350


>sp|Q48677|PEPA_LACLC GLUTAMYL-AMINOPEPTIDASE >gi|1072381|emb|CAA56994.1| (X81089)
           glutamyl-aminopeptidase [Lactococcus lactis]
           Length = 355
           
 Score =  122 bits (302), Expect = 8e-27
 Identities = 102/346 (29%), Positives = 165/346 (47%), Gaps = 21/346 (6%)

Query: 7   MQEIIEAPGVSGYEFLGIRDLVVDLLKEVADEVKVDKLGNVI---AHFKGSSPRVMVSAH 63
           ++ + E    SG+E   +RD +   + E+  + + D LG +    A    ++PR+MV+AH
Sbjct: 7   VKALTEIQATSGFEG-PVRDYLKARMVELGYQPEFDGLGGIFVTKASKVENAPRIMVAAH 65

Query: 64  MDKIGVMVNHIDNNGYLHIVPIGGVLPETLVAQRIRFFTEKGERYGVV-GVLPPHLRRGQ 122
           MD++G MV+ I  +G   +VP+GG  P  +  QR   FT  G++  VV G LPPHL RG 
Sbjct: 66  MDEVGFMVSSIKADGTFRVVPLGGWNPLVVSGQRFTLFTRTGKKIPVVTGGLPPHLLRGT 125

Query: 123 QDKGGKIDWDQIVVDVGASNKEEAEEMGFKVGTVGEFAPNFTRLSEH--RFATPYLDDRI 180
                      I+ D    N  EA E G   G +       T LS +     +   D+R 
Sbjct: 126 GVTPQIPAISDIIFDGAFENAAEAAEFGIAQGDL-IIPETETILSANGKNIISKAWDNRY 184

Query: 181 CLYAMIEAARQLGEHEADVYIV--ASVQEEVGLRGARVASYAIDPEIGIAMDVTFAKQP- 237
               ++E    L + E  V ++  A+VQEEVGLRGA+V++   +P++  A+D + A    
Sbjct: 185 GCLMILELLEFLADKELPVTLIIGANVQEEVGLRGAKVSTTKFNPDLFFAVDCSPASDTF 244

Query: 238 -HDKGKIVPELGKGPVM---DVGPNINPKLRAFADEVAKKYEIPLQVEPSPRPTGTDANV 293
             D G+    LG+G  +   D G  + P ++ F  + A   ++  QV  +    GTDA  
Sbjct: 245 GDDNGR----LGEGTTLRFFDPGHIMLPGMKNFLLDTANHAKVKTQVYMA--KGGTDAGA 298

Query: 294 MQINREGVATAVLSIPIRYMHSQVELADARDVDNTIKLAKALLEEL 339
             +   GV +  + +  RY+HS   + +  D        +A++  L
Sbjct: 299 AHLANGGVPSTTIGVVARYIHSHQTIFNIDDFLQAQTFLRAIITSL 344


>pir||S72475 glucanase (EC 3.2.1.-) - Anabaena variabilis
           >gi|1523802|emb|CAA66983.1| (X98339) glucanase [Anabaena
           variabilis]
           Length = 346
           
 Score = 76.5 bits (185), Expect = 4e-13
 Identities = 85/345 (24%), Positives = 155/345 (44%), Gaps = 26/345 (7%)

Query: 7   MQEIIEAPGVSGYEFLGIRDLVVDLLKEVADEVKVDKLGNVIAHFKG--SSPRVMVSAHM 64
           ++E++     SG E   I  L++     +  EV  D+  N+IA   G  S   V ++AH 
Sbjct: 11  IEELVMHHSPSGAE-TEINQLLLQKFAALGVEVWSDRADNIIAKIPGKNSDIAVAITAHK 69

Query: 65  DKIGVMVNHIDNNGYLHIVPIGGVLPETLVAQRIRFFTEKGERYGVVGVLPPHLRRGQ-- 122
           D+IG +V +I + G + +  +GG  P       +    +     G++     H+      
Sbjct: 70  DEIGAIVKNIGDAGKVEVRKLGGAYPWVYGEGVVDLLGDNETISGILSFGSRHVSHESPQ 129

Query: 123 --QDKGGKIDWDQIVVDVGASNKEEAEEMGFKVGT---VGEFAPNFTRLSEHRFATPYLD 177
             Q +   + W+   ++   +  EE E  G + GT   +G+      RL +H  A+  LD
Sbjct: 130 KVQQEDTAVKWENAWIETKRTT-EELEAAGIRPGTRMVIGKHRKRPVRLQDH-IASYTLD 187

Query: 178 DRICLYAMIEAARQLGEHEADVYIVASVQEEVGLRGARVASYAIDPEIGIAMDVTFAKQP 237
           ++  +  ++   +QL +   DVY+VAS +EEVG  GA   +     +  IA+++    + 
Sbjct: 188 NKASVAILLALVQQLKQPAIDVYLVASAKEEVGAIGALFFTQNQQLDALIALEICPLSEE 247

Query: 238 H----DKGKIVPELGKGPVMDVGPNINPKLRAFADEVAKKYEIPLQVEPSPRPTGTDANV 293
           +     +  ++       + D G  +N +LR    + AK+  + +Q+  +    G+DA++
Sbjct: 248 YPVKDSENPVLLVQDAYGIYDEG--LNGELR----QCAKQLNMSVQL-TTLSGFGSDASI 300

Query: 294 -MQINREGVATAVLSIPIRYMHSQVELADARDVDNTIKLAKALLE 337
            M+    G A A L+ P +  H   E+A    + N I L KA  E
Sbjct: 301 AMKFGHVGRA-ACLAFPTQNTHG-YEIAHLGAISNCINLLKAFCE 343


>pir||D83374 hypothetical protein PA2172 [imported] - Pseudomonas aeruginosa
           (strain PAO1) >gi|9948192|gb|AAG05560.1|AE004644_7
           (AE004644) hypothetical protein [Pseudomonas aeruginosa]
           Length = 358
           
 Score = 74.9 bits (181), Expect = 1e-12
 Identities = 84/337 (24%), Positives = 141/337 (40%), Gaps = 37/337 (10%)

Query: 3   DWKLMQEIIEAPGVSGYEFLGIRDLVVDLLKEVADEVKVDKLGNVIA-----HFKGSSPR 57
           D  L++E++ A G  G E   +R +    L+   DEV  D  GN++A     H      R
Sbjct: 5   DRALLEELLLARGPGGQED-EVRAICQRELEGCCDEVGSDAAGNLVARISPPHLPREQAR 63

Query: 58  ---VMVSAHMDKIGVMVNHIDNNGYLHIVPIGGVLPETLVAQRIRFFTEKGERYGVVGVL 114
              V + AH+D+I ++V  ++ +G L +V +GG  P +     ++    +    GV+   
Sbjct: 64  RAAVRLLAHLDEIAMIVKRVEADGTLRVVALGGAQPVSFGVCPVQILAGEAVLDGVLSYG 123

Query: 115 PPHLR----RGQQDKGGKIDWDQIVVDVGASNKEEAEEMGFKVGTVGEFAPNFTR--LSE 168
             H      +G     G + W  + V V   + EE   +G + GT       + R    +
Sbjct: 124 SMHATGESPQGSDVLSGAVHWRDVHV-VTRRSAEELANLGVRPGTRVVLNRLWRRPLYFQ 182

Query: 169 HRFATPYLDDRICLYAMI----EAARQLGEHEADVYIVASVQEEVGLRGARVASYAIDPE 224
              A  +LDDR  L A++    E AR+  E   D+Y+V +  EE    GA  A+  +  +
Sbjct: 183 DCVAAHFLDDRAPLLAVLGVAREIARRRDELHGDLYLVLTTMEEESNAGALFAARRLPGD 242

Query: 225 IGIAMDVTFAKQPHDKGKIVPELG----KGPVMDVGPNINPKLRAFADEVAKKYEIPLQV 280
           I IA++V         G  V E G    + P+++ G +     R   D + +  E   Q 
Sbjct: 243 ISIAVEV---------GPTVAEYGTRLCRDPIVNSGDSKGYYSRHVTDRLLRAAE-RCQY 292

Query: 281 EPSPR---PTGTDANVMQINREGVATAVLSIPIRYMH 314
           +P         +DA+ +  + E      + IP    H
Sbjct: 293 QPQAALLVDFASDASALLSHGEAAQVGCIGIPTENTH 329


>pir||D83214 conserved hypothetical protein PA3461 [imported] - Pseudomonas
           aeruginosa (strain PAO1)
           >gi|9949603|gb|AAG06849.1|AE004766_10 (AE004766)
           conserved hypothetical protein [Pseudomonas aeruginosa]
           Length = 398
           
 Score = 73.7 bits (178), Expect = 3e-12
 Identities = 61/232 (26%), Positives = 108/232 (46%), Gaps = 10/232 (4%)

Query: 5   KLMQEIIEAPGVSGYEFLGIRDLVVDLLKEVADEVKVDKLGNVIAHFKG--SSPRVMVSA 62
           +++ E++  P  +G+    +R  V + L E+    ++ + G + A  +G  ++P   VSA
Sbjct: 14  RVLLEMLAIPSPTGFTDTIVR-YVAEQLDELGVPFEMTRRGTIRATLQGRLNTPDRAVSA 72

Query: 63  HMDKIGVMVNHIDNNGYLHIVPIGGVLPETLVAQRIRFFTEKGE-RYGVVGVLPPHLRRG 121
           H+D IG +V  I  NG L + P+G          R+  FTE+G  R  V+ +L       
Sbjct: 73  HLDTIGALVREIKPNGRLGLAPVGCWSSRFAEGSRVTVFTEQGVFRGSVLPLLASGHAFN 132

Query: 122 QQDKGGKIDWDQIV--VDVGASNKEEAEEMGFKVGTVGEFAPNFTRLSEHRFATPYLDDR 179
            +    KI WD I   +D   +++ ++E +G  VG    F P          +  +LDD+
Sbjct: 133 TEVDNLKISWDNIELRLDAYTASRADSESLGISVGDYVAFDPLPEFTESGHISARHLDDK 192

Query: 180 ---ICLYAMIEAARQLG-EHEADVYIVASVQEEVGLRGARVASYAIDPEIGI 227
                L A ++A ++ G E   D + + ++ EEVG   A    + +   +GI
Sbjct: 193 AGVAALLAALKAVKESGQEPPIDCHPLFTITEEVGSGAAGALPWDVSEFVGI 244


>pir||G75040 probable aminopeptidase (EC 3.4.11.-) PAB0869 - Pyrococcus abyssi
           (strain Orsay) >gi|5458733|emb|CAB50220.1| (AJ248287)
           similar to glucanase [Pyrococcus abyssi]
           Length = 335
           
 Score = 71.8 bits (173), Expect = 1e-11
 Identities = 61/216 (28%), Positives = 103/216 (47%), Gaps = 10/216 (4%)

Query: 5   KLMQEIIEAPGVSGYEFLGIRDLVVDLLKEVADEVKVDKLGNVIAHFKGSSPRVMVSAHM 64
           K+++EI+E P  +GY    I   +   LKE   +      G ++A      P+++V AH+
Sbjct: 6   KILKEILEIPSPTGY-MKEIMPYLESFLKENNVKFYYTNKGALVAG-NHREPKLVVIAHV 63

Query: 65  DKIGVMVNHIDNNGYLHIVPIGGVLPETLVAQRIRFFTEKGERYGVVGVLPPHLRRGQQD 124
           D +G MV  I  NG+L    IGG+L  T   +     T +G+++    +L        +D
Sbjct: 64  DTLGAMVKEILPNGHLAFSRIGGLLLPTFEGEYCTIITRRGKKFRGTLLLRNPSMHVNKD 123

Query: 125 KGGKIDWDQ---IVVDVGASNKEEAEEMGFKVGTVGEFAPNFTRLSEHRFATPYLDDRIC 181
            G K   ++   I +D     KE+ E++G + G    F P F  ++     + +LDD+  
Sbjct: 124 AGKKERTEENMYIRLDELVEKKEDTEKLGIRPGDYIAFDPKFEYINGF-IKSHFLDDKAS 182

Query: 182 LYAMIEAARQLGEHEADVYIVA---SVQEEVGLRGA 214
           +  +++    +GE E + Y VA   S  EEVG  G+
Sbjct: 183 VAVILDLIADMGE-ELEKYPVAFFFSPYEEVGHGGS 217


  Database: ./suso.pep
    Posted date:  Jul 6, 2001  5:57 PM
  Number of letters in database: 840,471
  Number of sequences in database:  2977
  
  Database: /banques/blast2/nr.pep
    Posted date:  Dec 14, 2000 12:46 PM
  Number of letters in database: 188,266,275
  Number of sequences in database:  595,510
  
Lambda     K      H
   0.318    0.139    0.399 

Gapped
Lambda     K      H
   0.270   0.0470    0.230 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 130007424
Number of Sequences: 2977
Number of extensions: 5725714
Number of successful extensions: 12551
Number of sequences better than 1.0e-10: 33
Number of HSP's better than  0.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 12435
Number of HSP's gapped (non-prelim): 33
length of query: 346
length of database: 189,106,746
effective HSP length: 56
effective length of query: 290
effective length of database: 155,591,474
effective search space: 45121527460
effective search space used: 45121527460
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 165 (68.7 bits)