BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB2105 (minD-3) DE:cell division inhibitor (minD-3)
(251 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||H75150 cell division inhibitor (mind-3) PAB2105 - Pyrococcu... 503 e-142
pir||F71191 hypothetical protein PH1806 - Pyrococcus horikoshii ... 483 e-135
pir||C71105 probable cell division inhibitor MinD - Pyrococcus h... 129 4e-29
pir||A75056 cell division inhibitor (mind-2) PAB0954 - Pyrococcu... 127 1e-28
pir||F75175 cell division inhibitor (mind-1) PAB1983 - Pyrococcu... 115 7e-25
sp|Q57967|Y547_METJA HYPOTHETICAL ATP-BINDING PROTEIN MJ0547 >gi... 108 5e-23
pir||B69113 cell division inhibitor - Methanobacterium thermoaut... 105 6e-22
sp|Q57633|Y169_METJA HYPOTHETICAL ATP-BINDING PROTEIN MJ0169 >gi... 94 2e-18
gi|11498303 cell division inhibitor (minD-1) [Archaeoglobus fulg... 94 2e-18
dbj|BAA90261.1| (AB030278) MinD [Arabidopsis thaliana] >gi|97582... 92 6e-18
gi|7524873 cell division inhibitor MinD [Chlorella vulgaris] >gi... 89 4e-17
gi|11499521 cell division inhibitor (minD-2) [Archaeoglobus fulg... 89 5e-17
gi|11467635 inhibition of cell division factor [Guillardia theta... 86 3e-16
gi|11467859 septum-site determining protein [Nephroselmis olivac... 86 3e-16
sp|Q01464|MIND_BACSU SEPTUM SITE-DETERMINING PROTEIN MIND (CELL ... 86 4e-16
sp|Q55900|MIND_SYNY3 SEPTUM SITE-DETERMINING PROTEIN MIND (CELL ... 85 1e-15
emb|CAB53105.1| (AJ245645) cell division inhibitor MinD [Prototh... 81 1e-14
dbj|BAB06746.1| (AP001517) septum site-determining protein [Baci... 80 2e-14
gb|AAG19374.1| (AE005032) cell division inhibitor; MinD1 [Haloba... 80 3e-14
pir||H71038 probable cell division inhibitor - Pyrococcus horiko... 80 3e-14
gi|11466429 septum-site determining protein [Mesostigma viride] ... 80 3e-14
sp|Q9X2I3|MIND_THEMA SEPTUM SITE-DETERMINING PROTEIN MIND (CELL ... 77 2e-13
dbj|BAA90628.1| (AP001129) Similar to Chlorella vulgaris C-27 ch... 75 7e-13
gb|AAF33831.1|AF226282_5 (AF226282) hypothetical flagellar biosy... 71 1e-11
pir||F70375 cell division inhibitor (septum placement) minD2 - A... 71 1e-11
gb|AAG20269.1| (AE005101) cell division inhibitor; MinD2 [Haloba... 71 2e-11
sp|O25098|MIND_HELPY SEPTUM SITE-DETERMINING PROTEIN MIND (CELL ... 70 2e-11
sp|Q9ZMA8|MIND_HELPJ SEPTUM SITE-DETERMINING PROTEIN MIND (CELL ... 69 5e-11
pir||D75478 septum site-determining protein - Deinococcus radiod... 69 6e-11
pir||C82136 septum site-determining protein MinD VC1960 [importe... 68 8e-11
>pir||H75150 cell division inhibitor (mind-3) PAB2105 - Pyrococcus abyssi
(strain Orsay) >gi|5457797|emb|CAB49287.1| (AJ248284)
cell division inhibitor (minD-3) [Pyrococcus abyssi]
Length = 251
Score = 503 bits (1282), Expect = e-142
Identities = 251/251 (100%), Positives = 251/251 (100%)
Query: 1 MAVIVVTGRGGAGKTTTANLSTYFAQAGYRVLAIDGDLYLPNLGLHFALDNVKYTLHSIV 60
MAVIVVTGRGGAGKTTTANLSTYFAQAGYRVLAIDGDLYLPNLGLHFALDNVKYTLHSIV
Sbjct: 1 MAVIVVTGRGGAGKTTTANLSTYFAQAGYRVLAIDGDLYLPNLGLHFALDNVKYTLHSIV 60
Query: 61 KNPNMDPEWAIYRHEQTGVYVMPGSPRLEDVLGVSGQRLKDVIENLKYKYPVIFVDSPTG 120
KNPNMDPEWAIYRHEQTGVYVMPGSPRLEDVLGVSGQRLKDVIENLKYKYPVIFVDSPTG
Sbjct: 61 KNPNMDPEWAIYRHEQTGVYVMPGSPRLEDVLGVSGQRLKDVIENLKYKYPVIFVDSPTG 120
Query: 121 VPFDTLPAFESFNYQIIVVEIERSPIYSFETMVENEVLKLKALGDRFKLDVGVVINKVRE 180
VPFDTLPAFESFNYQIIVVEIERSPIYSFETMVENEVLKLKALGDRFKLDVGVVINKVRE
Sbjct: 121 VPFDTLPAFESFNYQIIVVEIERSPIYSFETMVENEVLKLKALGDRFKLDVGVVINKVRE 180
Query: 181 AADVIDKIVETIEEDIGVPVLGVIPFDDAVPESINVGIPVLVYKPRSDAALAFKEAGQLT 240
AADVIDKIVETIEEDIGVPVLGVIPFDDAVPESINVGIPVLVYKPRSDAALAFKEAGQLT
Sbjct: 181 AADVIDKIVETIEEDIGVPVLGVIPFDDAVPESINVGIPVLVYKPRSDAALAFKEAGQLT 240
Query: 241 EEWIFGSSSRS 251
EEWIFGSSSRS
Sbjct: 241 EEWIFGSSSRS 251
>pir||F71191 hypothetical protein PH1806 - Pyrococcus horikoshii
>gi|3258242|dbj|BAA30925.1| (AP000007) 252aa long
hypothetical protein [Pyrococcus horikoshii]
Length = 252
Score = 483 bits (1229), Expect = e-135
Identities = 237/251 (94%), Positives = 248/251 (98%), Gaps = 1/251 (0%)
Query: 1 MAVIVVTGRGGAGKTTT-ANLSTYFAQAGYRVLAIDGDLYLPNLGLHFALDNVKYTLHSI 59
MAVIVVTGRGGAGKTTT ANLSTYFAQ+GYRVLAIDGDLYLPNLGLHFALDNVKYTLHSI
Sbjct: 1 MAVIVVTGRGGAGKTTTTANLSTYFAQSGYRVLAIDGDLYLPNLGLHFALDNVKYTLHSI 60
Query: 60 VKNPNMDPEWAIYRHEQTGVYVMPGSPRLEDVLGVSGQRLKDVIENLKYKYPVIFVDSPT 119
VKNPNMDPEWAIYRHEQTGVYVMPGSPRLEDVLGVSGQRLKD+IE+LKYKYP+IFVDSPT
Sbjct: 61 VKNPNMDPEWAIYRHEQTGVYVMPGSPRLEDVLGVSGQRLKDIIEHLKYKYPLIFVDSPT 120
Query: 120 GVPFDTLPAFESFNYQIIVVEIERSPIYSFETMVENEVLKLKALGDRFKLDVGVVINKVR 179
G+PFDTLPAFESFNYQIIVVE+ERSPIYSFETMVENEVLKLKALGD+FKL+VGVVINKVR
Sbjct: 121 GIPFDTLPAFESFNYQIIVVEVERSPIYSFETMVENEVLKLKALGDKFKLEVGVVINKVR 180
Query: 180 EAADVIDKIVETIEEDIGVPVLGVIPFDDAVPESINVGIPVLVYKPRSDAALAFKEAGQL 239
EAADV+DKIVE IEEDIGVPVLGVIPFDD+VPESIN+GIPVLVYKPRSDAALAFKEAGQL
Sbjct: 181 EAADVMDKIVEVIEEDIGVPVLGVIPFDDSVPESINIGIPVLVYKPRSDAALAFKEAGQL 240
Query: 240 TEEWIFGSSSR 250
TEEWIFGSS R
Sbjct: 241 TEEWIFGSSGR 251
>pir||C71105 probable cell division inhibitor MinD - Pyrococcus horikoshii
>gi|3257018|dbj|BAA29701.1| (AP000003) 245aa long
hypothetical cell division inhibitor MinD [Pyrococcus
horikoshii]
Length = 245
Score = 129 bits (320), Expect = 4e-29
Identities = 86/233 (36%), Positives = 126/233 (53%), Gaps = 13/233 (5%)
Query: 3 VIVVTGRGGAGKTT-TANLSTYFAQAGYRVLAIDGDLYLPNLGLHFALDNVKYTLHSIVK 61
+ +V+G+GG GKTT TANLS + G +VLA+DGDL + NL L +D+V TLH ++
Sbjct: 5 ISIVSGKGGTGKTTVTANLSVALGEMGRKVLAVDGDLTMANLSLVLGVDDVNITLHDVLA 64
Query: 62 NPNMDPEWAIYRHEQTGVYVMPGSPRLEDVLGVSGQRLKDVIENLKYKYPVIFVDSPTGV 121
+ E AIY + VY++PG+ E V+ ++L +VI++LK KY I +D P G+
Sbjct: 65 G-DAKLEDAIYMTQFENVYILPGAVDWEHVIKADPRKLPEVIKSLKGKYDFILIDCPAGL 123
Query: 122 PFDTLPAFESFNYQIIVVEIERSPIYSFETMVENEVLKLKALGDRFKLDVGVVINKV-RE 180
D + A S I+V E S + +TM VLK L +G ++N+ R
Sbjct: 124 QLDAMSAMLSGEEAILVTNPEISCL--TDTMKVGMVLKKAGLA-----ILGFILNRYGRS 176
Query: 181 AADVIDKIVETIEEDIGVPVLGVIPFDDAVPESINVGIPVLVYKPRSDAALAF 233
D+ E ++ + VP+L VIP D + E GIP + YKP S A AF
Sbjct: 177 ERDIPP---EAAQDVMDVPLLAVIPEDPVIREGTLEGIPAVKYKPESKGAQAF 226
>pir||A75056 cell division inhibitor (mind-2) PAB0954 - Pyrococcus abyssi
(strain Orsay) >gi|5458855|emb|CAB50342.1| (AJ248287)
cell division inhibitor (minD-2) [Pyrococcus abyssi]
Length = 245
Score = 127 bits (316), Expect = 1e-28
Identities = 84/241 (34%), Positives = 129/241 (52%), Gaps = 11/241 (4%)
Query: 3 VIVVTGRGGAGKTT-TANLSTYFAQAGYRVLAIDGDLYLPNLGLHFALDNVKYTLHSIVK 61
+ +V+G+GG GKTT TANLS + G +VLA+DGDL + NL L +D+V TLH ++
Sbjct: 5 ISIVSGKGGTGKTTVTANLSVALGEMGKKVLAVDGDLTMANLSLVLGVDDVDVTLHDVLA 64
Query: 62 NPNMDPEWAIYRHEQTGVYVMPGSPRLEDVLGVSGQRLKDVIENLKYKYPVIFVDSPTGV 121
+ AIY + VYV+PG+ E V+ ++L +VI++LK Y I +D P G+
Sbjct: 65 G-EAKLQDAIYMTQFDNVYVLPGAVDWEHVMKADPRKLPEVIKSLKGDYDFILIDCPAGL 123
Query: 122 PFDTLPAFESFNYQIIVVEIERSPIYSFETMVENEVLKLKALGDRFKLDVGVVINKVREA 181
D + A S ++V E S + +TM VL+ L +G ++N+
Sbjct: 124 QLDAMSAMLSGEEALLVTNPEISCL--TDTMKVGIVLRKAGLA-----ILGFILNRYGRT 176
Query: 182 ADVIDKIVETIEEDIGVPVLGVIPFDDAVPESINVGIPVLVYKPRSDAALAFKEAGQLTE 241
+ I + ++ + VP+L VIP D A+ E GIP + YKP S+ A AF + Q E
Sbjct: 177 ENDIPP--DAAQDVMDVPLLAVIPEDPAIREGTLEGIPAVKYKPESEGAKAFVKLAQEVE 234
Query: 242 E 242
+
Sbjct: 235 K 235
>pir||F75175 cell division inhibitor (mind-1) PAB1983 - Pyrococcus abyssi
(strain Orsay) >gi|5457995|emb|CAB49485.1| (AJ248284)
cell division inhibitor (minD-1) [Pyrococcus abyssi]
Length = 260
Score = 115 bits (284), Expect = 7e-25
Identities = 76/236 (32%), Positives = 122/236 (51%), Gaps = 14/236 (5%)
Query: 2 AVIVVTGRGGAGKTTT-ANLSTYFAQAGYRVLAIDGDLYLPNLGLHFALDNVKYTLHSIV 60
+++ +G+GG GKTTT AN+ AQ G V+ ID D+ + NL L ++++ TLH ++
Sbjct: 5 SIVFASGKGGTGKTTTVANIGVALAQFGKDVILIDADITMANLSLILGMEDIPVTLHDVL 64
Query: 61 KNPNMDPEWAIYRHEQTGVYVMPGSPRLEDVLGVSGQRLKDVIENLKYKYPVIFVDSPTG 120
D + AIY GV V+PG LE + +RL+D+I + I +D+P G
Sbjct: 65 AG-EADLKDAIYEGP-AGVKVIPGGLSLEKIKKARAERLRDLIREISQMGDFILIDAPAG 122
Query: 121 VPFDTLPAFESFNYQIIVVEIERSPIYSFETMVENEVLKLKALGDRF-KLDVGVVINKVR 179
+ ++ A IIV E + I + LK K + ++ L +G ++N+V
Sbjct: 123 LELTSITALLIGKELIIVTNPEIAAI--------TDSLKTKLVAEKLGTLPLGAILNRVT 174
Query: 180 EAADVIDKIVETIEEDIGVPVLGVIPFDDAVPESINVGIPVLVYKPRSDAALAFKE 235
+ + E IE + VPVLG +P D V + G+P++V P S AA+A+KE
Sbjct: 175 SEKTELSR--EEIEALLEVPVLGTVPEDPEVKRASAYGVPLVVKNPTSPAAIAYKE 228
>sp|Q57967|Y547_METJA HYPOTHETICAL ATP-BINDING PROTEIN MJ0547 >gi|2144955|pir||C64368
cell division inhibitor MinD homolog MJ0547 -
Methanococcus jannaschii >gi|1591252|gb|AAB98539.1|
(U67504) cell division inhibitor minD [Methanococcus
jannaschii]
Length = 264
Score = 108 bits (268), Expect = 5e-23
Identities = 77/238 (32%), Positives = 129/238 (53%), Gaps = 16/238 (6%)
Query: 1 MAVIVVTGRGGAGKTT-TANLSTYFAQAGYRVLAIDGDLYLPNLGLHFALDNVKYTLHSI 59
+A+ + +G+GG GKTT +ANL+ A+ G +V +D D+ + NL L L+ TL+ +
Sbjct: 7 IAIAIASGKGGTGKTTISANLAVALAKFGKKVAVLDADIAMANLELIMGLEGKPVTLNDV 66
Query: 60 VKNPNMDPEWAIYRHEQTGVYVMPGSPRLEDVLGVSGQRLKDVIENLKYKYPVIFVDSPT 119
+ D + AIY + GV V+P LE ++L++V++ + ++ +D P
Sbjct: 67 LAG-KADIKDAIYEGPE-GVLVIPAGVSLEKFRRAKPEKLEEVLKAIHDLVEILIIDCPA 124
Query: 120 GVPFDTLPAFESFNYQIIVVEIERSPIYSFETMVENEVLKLKALGDRFKLD-VGVVINKV 178
G+ +TL A S + I+VV E S I ++ LK+ A+ R D +G ++N+V
Sbjct: 125 GIGKETLIAISSADGLIVVVNPEISSI--------SDALKIIAITKRLGTDIIGAIVNRV 176
Query: 179 -REAADVIDKIVETIEEDIGVPVLGVIPFDDAVPESINVGIPVLVYKPRSDAALAFKE 235
E+ ++ K +ETI E VPV+GV+P D V ++ G P+++ P S AA A E
Sbjct: 177 SNESTELGVKAIETILE---VPVIGVVPEDPHVRKAAAFGTPLVIMYPDSPAAQAIME 231
>pir||B69113 cell division inhibitor - Methanobacterium thermoautotrophicum
(strain Delta H) >gi|2622975|gb|AAB86306.1| (AE000937)
cell division inhibitor [Methanobacterium
thermoautotrophicum]
Length = 259
Score = 105 bits (259), Expect = 6e-22
Identities = 75/235 (31%), Positives = 118/235 (49%), Gaps = 14/235 (5%)
Query: 3 VIVVTGRGGAGKTT-TANLSTYFAQAGYRVLAIDGDLYLPNLGLHFALDNVKYTLHSIVK 61
+ V +G+GG GKTT TANL + G RV+ +D D+ + NL L ++ TLH ++
Sbjct: 5 ITVASGKGGVGKTTITANLGVALSTYGERVVVLDADIAMANLELILGMEGKSVTLHDVLA 64
Query: 62 NPNMDPEWAIYRHEQTGVYVMPGSPRLEDVLGVSGQRLKDVIENLKYKYPVIFVDSPTGV 121
N E A+Y GV V+P LE + V RL+D + L ++ +D+P G+
Sbjct: 65 G-NASIEDAVYEGPN-GVRVVPAGISLEGLRNVKLDRLEDALAYLIEDTDILLIDAPAGL 122
Query: 122 PFDTLPAFESFNYQIIVVEIERSPIYSFETMVENEVLKLKALGDRFKLDV-GVVINKVRE 180
D + A + + ++V E I ++ LK K + + +++ GVVIN RE
Sbjct: 123 EKDAVAALAAADELLLVTTPEVPSI--------SDALKTKIVASKLDINIIGVVIN--RE 172
Query: 181 AADVIDKIVETIEEDIGVPVLGVIPFDDAVPESINVGIPVLVYKPRSDAALAFKE 235
D VE +E + VPV+ VIP D V + G P+++ P+S A+ A E
Sbjct: 173 QYDKTFLSVEEVETILEVPVIAVIPDDPEVSRAAAFGEPIVIKNPKSPASNALME 227
>sp|Q57633|Y169_METJA HYPOTHETICAL ATP-BINDING PROTEIN MJ0169 >gi|2144954|pir||B64321
cell division inhibitor MinD homolog MJ0169 -
Methanococcus jannaschii >gi|1590922|gb|AAB98154.1|
(U67474) cell division inhibitor minD [Methanococcus
jannaschii]
Length = 263
Score = 94.0 bits (230), Expect = 2e-18
Identities = 72/240 (30%), Positives = 121/240 (50%), Gaps = 12/240 (5%)
Query: 1 MAVIVVTGRGGAGKTTT-ANLSTYFAQAGYRVLAIDGDLYLPNLGLHFALDNVKYTLHSI 59
M + + +G+GG GKTTT A+L+ A+ G +VLAIDGD+ + NLG+ F ++ K +LH +
Sbjct: 4 MIITIASGKGGVGKTTTSASLAVALAKLGKKVLAIDGDISMANLGILFNMEKKKPSLHEV 63
Query: 60 VKNPNMDPEWAIYRHEQTGVYVMPGSPRLEDVLGVSGQRLKDVIENLKYKYPVIFVDSPT 119
+ + D AIY+H +TGVYV+P S LE L DV+ + + + +D+P
Sbjct: 64 L-SEEADVRDAIYKH-KTGVYVLPTSLSLEGYKKSDIDLLPDVVNEVADDFDYVIIDAPA 121
Query: 120 GVPFDTLPAFESFNYQIIVVEIERSPIYSFETMVENEVLKLKALGDRFKLDVGVVINKVR 179
G+ + + ++VV E I + E+ + L +GVV+N+V
Sbjct: 122 GLNREMATHLAIADKLLLVVTPEMFSIIDAVRLKESAEMAGTPL-------MGVVLNRV- 173
Query: 180 EAADVIDKIVETIEEDIGVPVLGVIPFDDAVPESINVGIPVLVYKPRSDAALAFKEAGQL 239
D + + IE I VL +P D+ V + + V+ Y+ S A+ A+ + +
Sbjct: 174 -GRDFGEMGRDEIEMLIKGKVLVEVPEDENVRSAALKKMSVIEYRKNSPASQAYMKLASI 232
>gi|11498303 cell division inhibitor (minD-1) [Archaeoglobus fulgidus]
>gi|7443738|pir||H69336 cell division inhibitor (minD-1)
homolog - Archaeoglobus fulgidus
>gi|2649916|gb|AAB90541.1| (AE001056) cell division
inhibitor (minD-1) [Archaeoglobus fulgidus]
Length = 263
Score = 94.0 bits (230), Expect = 2e-18
Identities = 72/235 (30%), Positives = 115/235 (48%), Gaps = 14/235 (5%)
Query: 3 VIVVTGRGGAGKTT-TANLSTYFAQAGYRVLAIDGDLYLPNLGLHFALDNVKYTLHSIVK 61
+ V +G+GG GKTT TANL AQ G+ V +D D+ + NL L ++ + TL +++
Sbjct: 5 ITVASGKGGTGKTTITANLGVALAQLGHDVTIVDADITMANLELILGMEGLPVTLQNVLA 64
Query: 62 NPNMDPEWAIYRHEQTGVYVMPGSPRLEDVLGVSGQRLKDVIENLKYKYPVIFVDSPTGV 121
E AIY GV V+P LE + + ++L+DV+ + ++ +D+P G+
Sbjct: 65 GEARIDE-AIY-VGPGGVKVVPAGVSLEGLRKANPEKLEDVLTQIMESTDILLLDAPAGL 122
Query: 122 PFDTLPAFESFNYQIIVVEIERSPIYSFETMVENEVLKLKALGDRFKLDV-GVVINKVRE 180
+ A + ++VV E S I + LK K + +R V GVV+N++
Sbjct: 123 ERSAVIAIAAAQELLLVVNPEISSI--------TDGLKTKIVAERLGTKVLGVVVNRITT 174
Query: 181 AADVIDKIVETIEEDIGVPVLGVIPFDDAVPESINVGIPVLVYKPRSDAALAFKE 235
I+ IE + V+G+IP D V + G PV++ P S AA A E
Sbjct: 175 LG--IEMAKNEIEAILEAKVIGLIPEDPEVRRAAAYGKPVVLRSPNSPAARAIVE 227
>dbj|BAA90261.1| (AB030278) MinD [Arabidopsis thaliana] >gi|9758226|dbj|BAB08725.1|
(AB009056) septum site-determining MinD [Arabidopsis
thaliana]
Length = 326
Score = 92.1 bits (225), Expect = 6e-18
Identities = 74/246 (30%), Positives = 130/246 (52%), Gaps = 22/246 (8%)
Query: 3 VIVVTGRGGAGKTTT-ANLSTYFAQAGYRVLAIDGDLYLPNLGLHFALDN-VKYTLHSIV 60
V++ +G+GG GKTTT AN+ A+ G+ V+AID DL L NL L L+N V YT ++
Sbjct: 61 VVITSGKGGVGKTTTTANVGLSLARYGFSVVAIDADLGLRNLDLLLGLENRVNYTCVEVI 120
Query: 61 KNPNMDPEWAIYRHEQTGVY--VMPGSPRLEDVLGVSGQRLKDVIENLKYK----YPVIF 114
N + + A+ R ++ + + PR + +G G+ L+ +++ LK + I
Sbjct: 121 -NGDCRLDQALVRDKRWSNFELLCISKPRSKLPMGFGGKALEWLVDALKTRPEGSPDFII 179
Query: 115 VDSPTGVPFDTLPAFESFNYQIIVVEIERSPIYSFETMVENEVLKLKALGDRFKLDVGVV 174
+D P G+ + A N ++V + + + + + L+ G R D+ ++
Sbjct: 180 IDCPAGIDAGFITAITPANEAVLVTTPDITALRDADRVTG----LLECDGIR---DIKMI 232
Query: 175 INKVR----EAADVIDKIVETIEEDIGVPVLGVIPFDDAVPESINVGIPVLVYKPRSDAA 230
+N+VR + D++ V ++E +G+ +LGVIP D V S N G P+++ KP + A
Sbjct: 233 VNRVRTDMIKGEDMMS--VLDVQEMLGLSLLGVIPEDSEVIRSTNRGFPLVLNKPPTLAG 290
Query: 231 LAFKEA 236
LAF++A
Sbjct: 291 LAFEQA 296
>gi|7524873 cell division inhibitor MinD [Chlorella vulgaris]
>gi|3024135|sp|P56346|MIND_CHLVU PUTATIVE SEPTUM
SITE-DETERMINING PROTEIN MIND >gi|7443732|pir||T07303
cell division inhibitor - Chlorella vulgaris chloroplast
>gi|2224467|dbj|BAA57951.1| (AB001684) cell division
inhibitor MinD [Chlorella vulgaris]
Length = 282
Score = 89.3 bits (218), Expect = 4e-17
Identities = 72/243 (29%), Positives = 126/243 (51%), Gaps = 17/243 (6%)
Query: 3 VIVVTGRGGAGKTTT-ANLSTYFAQAGYRVLAIDGDLYLPNLGLHFALDN-VKYTLHSIV 60
+++ +G+GG GKTTT ANL A+ GYRV ID D+ L NL L L+N V YT IV
Sbjct: 19 IVITSGKGGVGKTTTTANLGMSIARLGYRVALIDADIGLRNLDLLLGLENRVLYTAMDIV 78
Query: 61 KNPNMDPEWAIYRHEQTGVYVMPGSPRLEDVLGVSGQRLKDVIENLK-YKYPVIFVDSPT 119
+ + A+ R ++ + + V+ + ++++I+++K + + +D P
Sbjct: 79 EG-QCRLDQALIRDKRWKNLALLAISKNRQKYNVTRKNMQNLIDSVKELGFQFVLIDCPA 137
Query: 120 GVPFDTLPAFESFNYQIIVVEIERSPIYSFETMVENEVLKLKALGDRFKLDVGVVINKVR 179
G+ + A S +IV E + I + + L+A G +V +++N+VR
Sbjct: 138 GIDVGFINAIASAQEAVIVTTPEITAIRDADRVAG----LLEANG---IYNVKLLVNRVR 190
Query: 180 EAADVIDK----IVETIEEDIGVPVLGVIPFDDAVPESINVGIPVLVYKPRSDAALAFKE 235
D+I K V ++E +G+P+LG IP D +V S N G P+++ K + + +AF+
Sbjct: 191 --PDMIQKNDMMSVRDVQEMLGIPLLGAIPEDTSVIISTNKGEPLVLNKKLTLSGIAFEN 248
Query: 236 AGQ 238
A +
Sbjct: 249 AAR 251
>gi|11499521 cell division inhibitor (minD-2) [Archaeoglobus fulgidus]
>gi|7443739|pir||H69491 cell division inhibitor (minD-2)
homolog - Archaeoglobus fulgidus
>gi|2648607|gb|AAB89318.1| (AE000970) cell division
inhibitor (minD-2) [Archaeoglobus fulgidus]
Length = 252
Score = 88.9 bits (217), Expect = 5e-17
Identities = 69/242 (28%), Positives = 122/242 (49%), Gaps = 22/242 (9%)
Query: 6 VTGRGGAGKTT-TANLSTYFAQAGYRVLAIDGDLYLPNLGLHFALDNVKYTLHSIVKN-P 63
V+G+ GK+T T NLS AQ YRV ID D LP L +D+V T +++
Sbjct: 8 VSGKESEGKSTLTVNLSVLMAQKDYRVAVIDFDPSLPALSSLCKVDDVPLTAKNVIDGFA 67
Query: 64 NMDPEWAIYRHEQTGVYVMPGSPRLEDVLGVSGQRLKDVIENLKYKYPVIFVDSPTGVPF 123
++D I+ +GV V+P +++ + L+D++E ++ V+F+D P G+
Sbjct: 68 SVDD---IFYSGISGVEVIPAGMSIKEFRKAN---LRDLLERVEESADVLFLDVPGGLCH 121
Query: 124 DTLPAFESFNYQIIVVEIERSPIYSFETMVENEVLKLKALGDRFKLD-VGVVINKVREAA 182
D++ A + ++V++ E + + + L L + ++ K D GVV+NKV E
Sbjct: 122 DSVLAIYAATSVLLVIKPEAASLEA--------ALPLPRIIEKLKADFAGVVLNKVEEGE 173
Query: 183 DVIDKIVETIEEDIGVPVLGVIPFDDAVPESINVGIPVLVYKPRSDAALAFKEAGQLTEE 242
ID + I V+ IP+D+A+ +++ G PV+ P S+++ +F E +
Sbjct: 174 VEIDDVEALIGN-----VIAEIPYDEAIKKAMASGRPVIFSSPMSESSKSFVEISEALSV 228
Query: 243 WI 244
WI
Sbjct: 229 WI 230
>gi|11467635 inhibition of cell division factor [Guillardia theta]
>gi|6016572|sp|O78436|MIND_GUITH PUTATIVE SEPTUM
SITE-DETERMINING PROTEIN MIND >gi|3602960|gb|AAC35621.1|
(AF041468) inhibition of cell division factor
[Guillardia theta]
Length = 269
Score = 86.2 bits (210), Expect = 3e-16
Identities = 71/239 (29%), Positives = 116/239 (47%), Gaps = 18/239 (7%)
Query: 3 VIVVTGRGGAGKTT-TANLSTYFAQAGYRVLAIDGDLYLPNLGLHFALDN-VKYTLHSIV 60
V++ +G+GG GKTT TANL AQ GYR ID D+ L NL L L+N V YT ++
Sbjct: 5 VVITSGKGGVGKTTVTANLGMALAQLGYRTALIDADIGLRNLDLLLGLENRVIYTALEVL 64
Query: 61 KNPNMDPEWAIYRHEQTGVYVMPGSP-RLEDVLGVSGQRLKDVIENLKYKYPVIFVDSPT 119
+ I Q + ++P + R +D V+ +++K ++ L Y + +D P
Sbjct: 65 SGECRLEQALIKDKRQPNLVLLPAAQNRNKD--SVTEEQMKFLVNLLVNDYDYLLIDCPA 122
Query: 120 GVPFDTLPAFESFNYQIIVVEIERSPIYSFETMV----ENEVLKLKALGDRFKLDVGVVI 175
G+ A I+V E + + + ++ N + ++K L +R + + V
Sbjct: 123 GIETGFHNAIGPAQEAIVVTTPEIAAVRDADRVIGLLEANGIKQIKLLVNRLRPQM-VKA 181
Query: 176 NKVREAADVIDKIVETIEEDIGVPVLGVIPFDDAVPESINVGIPVLVYKPRSDAALAFK 234
N + ADV E + +P++GVIP D+ V S N G P+++ K S LAF+
Sbjct: 182 NDMMSVADV--------REILAIPLIGVIPEDECVIVSTNRGEPLVLEKNLSLPGLAFE 232
>gi|11467859 septum-site determining protein [Nephroselmis olivacea]
>gi|11467886|ref|NP_050937.1| septum-site determining
protein [Nephroselmis olivacea]
>gi|5880788|gb|AAD54881.1|AF137379_104 (AF137379)
septum-site determining protein [Nephroselmis olivacea]
>gi|5880815|gb|AAD54908.1|AF137379_131 (AF137379)
septum-site determining protein [Nephroselmis olivacea]
Length = 274
Score = 86.2 bits (210), Expect = 3e-16
Identities = 74/241 (30%), Positives = 121/241 (49%), Gaps = 13/241 (5%)
Query: 3 VIVVTGRGGAGKTT-TANLSTYFAQAGYRVLAIDGDLYLPNLGLHFALDN-VKYTLHSIV 60
+++ +G+GG GKTT TANL A+ GYRV ID D+ L NL L L+N V YT ++
Sbjct: 16 IVITSGKGGVGKTTATANLGMCIARLGYRVALIDADIGLRNLDLLLGLENRVVYTAMEVI 75
Query: 61 KNPNMDPEWAIYRHEQTGVYVMPGSPRLEDVLGVSGQRLKDVIENLKYK-YPVIFVDSPT 119
+ E A+ R ++ M + ++ + + +++++K + Y I +D P
Sbjct: 76 EG-QCRLEQALIRDKRWKNLSMLAMSKNRQRYNMTRKNMMMIVDSIKERGYQYILIDCPA 134
Query: 120 GVPFDTLPAFESFNYQIIVVEIERSPIYSFETMVENEVLKLKALGDRFKLDVGVVINKVR 179
G+ + A + I+V E + I + V L D + +V +V N+VR
Sbjct: 135 GIDAGFVNAIAPADEAILVTTPEITAIRDAD-----RVAGLLEANDFY--NVRLVANRVR 187
Query: 180 -EAADVIDKI-VETIEEDIGVPVLGVIPFDDAVPESINVGIPVLVYKPRSDAALAFKEAG 237
E D + V+ ++ IGVP+LG IP D V S N G P++ K + A +AF+EA
Sbjct: 188 PEMIQQNDMMSVDDVQGMIGVPLLGAIPEDKNVIISTNRGEPLVCQKTITLAGVAFEEAA 247
Query: 238 Q 238
+
Sbjct: 248 R 248
>sp|Q01464|MIND_BACSU SEPTUM SITE-DETERMINING PROTEIN MIND (CELL DIVISION INHIBITOR MIND)
>gi|322178|pir||G45239 cell division inhibitor minD
[validated] - Bacillus subtilis
>gi|142859|gb|AAA22401.1| (M96343) MinD protein
[Bacillus subtilis] >gi|143216|gb|AAA22609.1| (M95582)
putative [Bacillus subtilis] >gi|580893|emb|CAA78818.1|
(Z15113) MinD [Bacillus subtilis]
>gi|2635264|emb|CAB14759.1| (Z99118) ATPase activator of
MinC [Bacillus subtilis]
Length = 268
Score = 85.8 bits (209), Expect = 4e-16
Identities = 62/236 (26%), Positives = 125/236 (52%), Gaps = 9/236 (3%)
Query: 2 AVIVVTGRGGAGKTTT-ANLSTYFAQAGYRVLAIDGDLYLPNLGLHFALDN-VKYTLHSI 59
A+++ +G+GG GKTTT ANL T A G RV +D D+ L NL + L+N + Y L +
Sbjct: 4 AIVITSGKGGVGKTTTSANLGTALAILGKRVCLVDTDIGLRNLDVVMGLENRIIYDLVDV 63
Query: 60 VKNP-NMDPEWAIYRHEQTGVYVMPGSPRLEDVLGVSGQRLKDVIENLKYKYPVIFVDSP 118
V+ M + +Y+MP + + D V+ +++K++++ LK ++ + +D P
Sbjct: 64 VEGRCKMHQALVKDKRFDDLLYLMPAA-QTSDKTAVAPEQIKNMVQELKQEFDYVIIDCP 122
Query: 119 TGVPFDTLPAFESFNYQIIVVEIERSPIYSFETMVENEVLKLKALGDRFKLDVGVVINKV 178
G+ A + I+V E S + + ++ +L+ + + +L V + N +
Sbjct: 123 AGIEQGYKNAVSGADKAIVVTTPEISAVRDADRII--GLLEQEENIEPPRLVVNRIRNHL 180
Query: 179 REAADVIDKIVETIEEDIGVPVLGVIPFDDAVPESINVGIPVLVYKPRSDAALAFK 234
+ D +D ++ I + + + +LG++ DD V ++ N G P+ + P++ A++A++
Sbjct: 181 MKNGDTMD--IDEIVQHLSIDLLGIVADDDEVIKASNHGEPIAM-DPKNRASIAYR 233
>sp|Q55900|MIND_SYNY3 SEPTUM SITE-DETERMINING PROTEIN MIND (CELL DIVISION INHIBITOR MIND)
>gi|7443733|pir||S76970 hypothetical protein -
Synechocystis sp. (strain PCC 6803)
>gi|1001783|dbj|BAA10662.1| (D64005) septum
site-determining protein MinD [Synechocystis sp.]
Length = 266
Score = 84.7 bits (206), Expect = 1e-15
Identities = 63/244 (25%), Positives = 124/244 (50%), Gaps = 14/244 (5%)
Query: 3 VIVVTGRGGAGKTTT-ANLSTYFAQAGYRVLAIDGDLYLPNLGLHFALDN-VKYTLHSIV 60
++V +G+GG GKTTT ANL A+ G +V+ ID D L NL L L+ + YT ++
Sbjct: 5 IVVTSGKGGVGKTTTTANLGAALARLGKKVVLIDADFGLRNLDLLLGLEQRIVYTAIDVL 64
Query: 61 KNPNMDPEWAIYRHEQTGVYVMPGSP-RLEDVLGVSGQRLKDVIENLKYKYPVIFVDSPT 119
+ + + + ++P + R +D ++ ++++ ++E LK K+ I +D P
Sbjct: 65 ADECTIDKALVKDKRLPNLVLLPAAQNRSKDA--INAEQMQSLVEQLKDKFDYIIIDCPA 122
Query: 120 GVPFDTLPAFESFNYQIIVVEIERSPIYSFETMVENEVLKLKALGDRFKLDVGVVINKVR 179
G+ A IIV E S + + ++ +L+ + +G + +++N++R
Sbjct: 123 GIEAGFRNAVAPAQEAIIVTTPEMSAVRDADRVIG--LLEAEDIGK-----ISLIVNRLR 175
Query: 180 EAADVIDKI--VETIEEDIGVPVLGVIPFDDAVPESINVGIPVLVYKPRSDAALAFKEAG 237
++++ VE I + + VP++G++P D + S N G P+++ + S LAF+
Sbjct: 176 PEMVQLNQMISVEDILDLLAVPLIGILPDDQKIIISTNKGEPLVMEEKLSVPGLAFQNIA 235
Query: 238 QLTE 241
+ E
Sbjct: 236 RRLE 239
>emb|CAB53105.1| (AJ245645) cell division inhibitor MinD [Prototheca wickerhamii]
Length = 359
Score = 80.8 bits (196), Expect = 1e-14
Identities = 65/243 (26%), Positives = 118/243 (47%), Gaps = 17/243 (6%)
Query: 3 VIVVTGRGGAGKTTT-ANLSTYFAQAGYRVLAIDGDLYLPNLGLHFALDN-VKYTLHSIV 60
+++ +G+GG GKTTT ANL A+ GYRV ID D+ L NL L L+N + +T I+
Sbjct: 96 IVITSGKGGVGKTTTTANLGMSIARFGYRVALIDADIGLRNLDLLLGLENRITFTAMDII 155
Query: 61 KNPNMDPEWAIYRHEQTGVYVMPGSPRLEDVLGVSGQRLKDVIENLK-YKYPVIFVDSPT 119
+ + A+ R ++ + + V+ Q ++ ++ ++K I +D P
Sbjct: 156 EG-RCRLDQALVREKRWKNLALLAVSKNHQKYNVTQQHMRQLVFSIKELGINSILIDCPA 214
Query: 120 GVPFDTLPAFESFNYQIIVVEIERSPIYSFETMV----ENEVLKLKALGDRFKLDVGVVI 175
G+ + A IIV E + I + + N ++ K L +R ++D ++
Sbjct: 215 GIDVGFINAIAPAQEAIIVTTPEITAIRDADRVAGLLEANTIVDTKLLLNRVRMD--MIQ 272
Query: 176 NKVREAADVIDKIVETIEEDIGVPVLGVIPFDDAVPESINVGIPVLVYKPRSDAALAFKE 235
N + + ++E +G+P+LG IP D V S N G P+++ K + + +AF+
Sbjct: 273 NSTMLS-------IMDVQETLGIPLLGAIPEDTNVIISTNKGEPLVLDKKLTLSGIAFEN 325
Query: 236 AGQ 238
A +
Sbjct: 326 AAR 328
>dbj|BAB06746.1| (AP001517) septum site-determining protein [Bacillus halodurans]
Length = 264
Score = 80.4 bits (195), Expect = 2e-14
Identities = 62/242 (25%), Positives = 125/242 (51%), Gaps = 23/242 (9%)
Query: 2 AVIVVTGRGGAGKTTT-ANLSTYFAQAGYRVLAIDGDLYLPNLGLHFALDN-VKYTLHSI 59
A+++ +G+GG GKTTT AN+ T A +G +V +D D+ L NL + L+N + Y L +
Sbjct: 4 AIVITSGKGGVGKTTTSANIGTALALSGKKVCLVDTDIGLRNLDVVMGLENRIIYDLVDV 63
Query: 60 VKNPNMDPEWAIYRHEQTGVYVMPGSPRLEDVLGVSGQRLKDVIENLKYKYPVIFVDSPT 119
V+ + I + ++P + + +D V+ +++K+++E LK +Y + +D P
Sbjct: 64 VEGRCRLKQALIKDKRFECLNLLPAA-QTKDKSAVTPEQMKEIVEELKQEYDYVLIDCPA 122
Query: 120 GVPFDTLPAFESFNYQIIVVEIERSPIYSFETMV---ENEVLKLKALGDRFKLDVGVVIN 176
G+ A + I+V E S + + ++ E E ++ L V+N
Sbjct: 123 GIEQGFKNAVAGADKAIVVTTPEISSVRDADRIIGLLEKEEVEAPRL----------VVN 172
Query: 177 KVR----EAADVIDKIVETIEEDIGVPVLGVIPFDDAVPESINVGIPVLVYKPRSDAALA 232
++R + +++D V+ I + + +LG++ D+ V + N G P+ ++ P S A++A
Sbjct: 173 RIRGHMMKNGEMLD--VDEIVSILAIELLGIVVDDENVIKFSNKGEPIALH-PDSKASVA 229
Query: 233 FK 234
++
Sbjct: 230 YR 231
>gb|AAG19374.1| (AE005032) cell division inhibitor; MinD1 [Halobacterium sp. NRC-1]
Length = 323
Score = 80.0 bits (194), Expect = 3e-14
Identities = 70/231 (30%), Positives = 105/231 (45%), Gaps = 15/231 (6%)
Query: 5 VVTGRGGAGK-TTTANLSTYFAQAGYRVLAIDGDLYLPNLGLHFALDNVKYTLHSIVKNP 63
V +G+GG GK TTTANL A G+ V +D DL + NL F L TLH ++
Sbjct: 13 VASGKGGVGKSTTTANLGVALADEGFEVALVDVDLGMANLAGLFGLTE-DVTLHDVLSG- 70
Query: 64 NMDPEWAIYRHEQTGVYVMPGSPRLEDVLGVSGQRLKDVIENLKYKYPVIFVDSPTGVPF 123
D A ++ GV V+PGS LE + L V+ L+ + V+ +D+ G+ +
Sbjct: 71 --DASPADAAYDAHGVTVVPGSTDLEQFAEADAKSLHRVVTRLRADHDVVLLDAGAGLSY 128
Query: 124 DTLPAFESFNYQIIVVEIERSPIYSFETMVENEVLKLKALGDRFKLDVGVVINKVREAA- 182
D A + ++V E + + + T V KL K VG V + +
Sbjct: 129 DIAMAMSVADGVLLVTTAELNSL-TDATKTGQLVSKLD------KPVVGAVFTRTGDGGF 181
Query: 183 DVIDKIVETIEEDIGVPVLGVIPFDDAVPESINVGIPVLVYKPRSDAALAF 233
D ++ I + V V +P DDAV ++ G PV+ P S AA A+
Sbjct: 182 DDVEGIAAALGTTDAVTV--SVPHDDAVKLAVRKGHPVVDLTPESPAARAY 230
>pir||H71038 probable cell division inhibitor - Pyrococcus horikoshii
>gi|3258029|dbj|BAA30712.1| (AP000006) 217aa long
hypothetical cell division inhibitor [Pyrococcus
horikoshii]
Length = 217
Score = 79.6 bits (193), Expect = 3e-14
Identities = 57/197 (28%), Positives = 98/197 (48%), Gaps = 13/197 (6%)
Query: 40 LPNLGLHFALDNVKYTLHSIVKNPNMDPEWAIYRHEQTGVYVMPGSPRLEDVLGVSGQRL 99
+ NL L ++++ TLH ++ + + AIY GV V+PG LE V +RL
Sbjct: 1 MANLSLILGMEDIPVTLHDVLAG-EAELKDAIYEGP-AGVKVIPGGLSLEKVKKARPERL 58
Query: 100 KDVIENLKYKYPVIFVDSPTGVPFDTLPAFESFNYQIIVVEIERSPIYSFETMVENEVLK 159
+++I + I +D+P G+ ++ A IIV E + I + LK
Sbjct: 59 RELIREISQMGDFILIDAPAGLELTSVTALLIGKELIIVTNPEIAAI--------TDSLK 110
Query: 160 LKALGDRF-KLDVGVVINKVREAADVIDKIVETIEEDIGVPVLGVIPFDDAVPESINVGI 218
K + ++ L +G ++N+V + + E IE + VPVLG++P D V + G+
Sbjct: 111 TKLVAEKLGTLPLGAILNRVTNEKTELSR--EEIEALLEVPVLGIVPEDPEVKRASAYGV 168
Query: 219 PVLVYKPRSDAALAFKE 235
P++V P S AA+A+K+
Sbjct: 169 PLVVKNPTSPAAIAYKQ 185
>gi|11466429 septum-site determining protein [Mesostigma viride]
>gi|7259572|gb|AAF43873.1|AF166114_85 (AF166114)
septum-site determining protein [Mesostigma viride]
Length = 286
Score = 79.6 bits (193), Expect = 3e-14
Identities = 65/243 (26%), Positives = 123/243 (49%), Gaps = 17/243 (6%)
Query: 3 VIVVTGRGGAGKTTT-ANLSTYFAQAGYRVLAIDGDLYLPNLGLHFALDN-VKYTLHSIV 60
+++ +G+GG GKTTT ANL A+ GY+V ID D+ L NL L L+N V YT +
Sbjct: 20 IVITSGKGGVGKTTTTANLGMSIARLGYKVALIDADVGLRNLDLLLGLENRVIYTAMEVF 79
Query: 61 KNPNMDPEWAIYRHEQTGVYVMPGSPRLEDVLGVSGQRLKDVIENLKYK-YPVIFVDSPT 119
+ + A+ R ++ + + ++ + ++ ++++++ + Y I +D P
Sbjct: 80 EG-ECCLDQALIRDKRWSNLALLAISKTRQRYHLTRRNMEMLVDSIRLRNYNFILIDCPA 138
Query: 120 GVPFDTLPAFESFNYQIIVVEIERSPIYSFETMVENEVLKLKALGDRFKLDVGVVINKVR 179
G+ + A ++V E + I + + L+A G +V +++N+VR
Sbjct: 139 GIDVGFVNAVAPAEEAVVVTTPEITSIRDADRVAG----LLEASG---IYEVKLLVNRVR 191
Query: 180 EAADVIDK----IVETIEEDIGVPVLGVIPFDDAVPESINVGIPVLVYKPRSDAALAFKE 235
D+I K V ++E +G+P+LG IP D V S N G P+++ K + + ++F+
Sbjct: 192 --PDMIQKNDMLSVRDVQEMLGIPLLGAIPEDTNVIVSTNRGQPLVLNKKLTLSGISFEN 249
Query: 236 AGQ 238
A +
Sbjct: 250 AAR 252
>sp|Q9X2I3|MIND_THEMA SEPTUM SITE-DETERMINING PROTEIN MIND (CELL DIVISION INHIBITOR MIND)
>gi|7443735|pir||A72200 septum site-determining protein
MinD - Thermotoga maritima (strain MSB8)
>gi|4982456|gb|AAD36932.1|AE001824_1 (AE001824) septum
site-determining protein MinD [Thermotoga maritima]
Length = 271
Score = 76.9 bits (186), Expect = 2e-13
Identities = 60/223 (26%), Positives = 112/223 (49%), Gaps = 12/223 (5%)
Query: 3 VIVVTGRGGAGKTT-TANLSTYFAQAGYRVLAIDGDLYLPNLGLHFALDN-VKYTLHSIV 60
++V +G+GG GKTT TANL A+ G +V ID D+ L NL + L+N + YT+ +V
Sbjct: 5 IVVTSGKGGVGKTTITANLGCALAKLGEKVCLIDADIGLKNLDIVLGLENRIVYTMIDVV 64
Query: 61 KNPNMDPEWAIYRHEQ-TGVYVMPGSPRLEDVLGVSGQRLKDVIENLKYKYPVIFVDSPT 119
N + P+ A+ +H+ +Y++P S ++ +S +K +++ L + I +DSP
Sbjct: 65 -NGKVSPQEALVKHKMLKNLYLLPAS-QIATKEMISPNDMKAIVKELIPHFDYIIIDSPA 122
Query: 120 GVPFDTLPAFESFNYQIIVVEIERSPIYSFETMVENEVLKLKALGDRFKLDVGVVINKVR 179
G+ A ++V E I + ++ +L+ D + V+IN+ +
Sbjct: 123 GIERGFRNAVAPAERVLVVTTPELPAISDADRVI--GLLENFGFSDE---KINVIINRFK 177
Query: 180 EAADVIDKIVET--IEEDIGVPVLGVIPFDDAVPESINVGIPV 220
+++ T I+ + + ++ VIP + + + N GIPV
Sbjct: 178 PHMVKKGEMLTTDDIKHTLSLEIIAVIPDSEDIIVASNTGIPV 220
>dbj|BAA90628.1| (AP001129) Similar to Chlorella vulgaris C-27 chloroplast DNA, cell
division inhibitor MinD. (AB001684) [Oryza sativa]
Length = 306
Score = 75.3 bits (182), Expect = 7e-13
Identities = 65/247 (26%), Positives = 117/247 (47%), Gaps = 25/247 (10%)
Query: 3 VIVVTGRGGAGKTTT-ANLSTYFAQAGYRVLAIDGDLYLPNLGLHFALDNVKYTLHSIVK 61
V+V +G+GG GKTTT ANL+ A+ +A+D D L NL L L+N + + V
Sbjct: 39 VVVTSGKGGVGKTTTTANLAASLARLSLSAVAVDADAGLRNLDLLLGLENRVHLTAADVL 98
Query: 62 NPNMDPEWAIYRHEQTG--VYVMPGSPRLEDVLGVSGQRLKDVIENLKYKY---PVIFVD 116
+ + A+ RH + PR + L + L V + L+ I +D
Sbjct: 99 AGDCRLDQALVRHRALHDLQLLCLSKPRSKLPLAFGSKTLTWVADALRRAANPPAFILID 158
Query: 117 SPTGVPFDTLPAFESFNYQIIVVEIERSPIYSFET---MVENEVLKLKALGDRFKLDVGV 173
P GV + A ++V + + + + ++E + +K D+ +
Sbjct: 159 CPAGVDAGFVTAIAPAEEAVLVTTPDITALRDADRVAGLLECDGIK----------DIKI 208
Query: 174 VINKVR----EAADVIDKIVETIEEDIGVPVLGVIPFDDAVPESINVGIPVLVYKPRSDA 229
++N+VR + D++ + ++E +G+P+LGV+P D V S N G+P+++ P + A
Sbjct: 209 IVNRVRPDLVKGEDMMSAL--DVQEMLGLPLLGVVPEDAEVIRSTNRGVPLVLNDPPTPA 266
Query: 230 ALAFKEA 236
LA ++A
Sbjct: 267 GLALEQA 273
>gb|AAF33831.1|AF226282_5 (AF226282) hypothetical flagellar biosynthesis switch protein
[Xanthomonas oryzae pv. oryzae]
Length = 319
Score = 71.4 bits (172), Expect = 1e-11
Identities = 68/247 (27%), Positives = 110/247 (44%), Gaps = 11/247 (4%)
Query: 3 VIVVTGRGGAGKTT-TANLSTYFAQAGYRVLAIDGDLYLPNLGLHFALDNVKYTLHSIVK 61
+ V G+GG GKT +ANL+ A G R L +D DL L NL + L KYTL ++
Sbjct: 54 IAVTGGKGGVGKTNISANLAVALADMGKRTLLLDADLGLANLDVVLGLAP-KYTLADLIA 112
Query: 62 NPNMDPEWAIYRHEQTGVYVMP---GSPRLEDVLGVSGQRLKDVIENLKYKYPVIFVDSP 118
E I GV V+P G + ++ L +V L+ V+ +D+
Sbjct: 113 GRCTLDEVII--EGPGGVLVVPAASGRRHMAELAPAQHIGLVNVFSELERDLDVMVIDTA 170
Query: 119 TGVPFDTLPAFESFNYQIIVVEIERSPIYSFETMVENEVLKLKALGDRFKLDVGVVI--N 176
G+ L ++ ++VV E + I +++ VL + DR ++ +V N
Sbjct: 171 AGITDSVLTFCQAAQDTVVVVCDEPASITDAYALIK--VLSRERGVDRLQIIANMVRDPN 228
Query: 177 KVREAADVIDKIVETIEEDIGVPVLGVIPFDDAVPESINVGIPVLVYKPRSDAALAFKEA 236
+ R D + ++ E D+ + LG +P DD + S+ PV+ P S +A A E
Sbjct: 229 EGRLLYDKLSRVCEKFLGDVSLNYLGHVPQDDWLRLSVQRQQPVIKAYPASPSAQAIAEI 288
Query: 237 GQLTEEW 243
+ T W
Sbjct: 289 ARRTSRW 295
>pir||F70375 cell division inhibitor (septum placement) minD2 - Aquifex aeolicus
>gi|2983413|gb|AAC06996.1| (AE000712) septum
site-determining protein MinD [Aquifex aeolicus]
Length = 262
Score = 71.0 bits (171), Expect = 1e-11
Identities = 61/232 (26%), Positives = 119/232 (51%), Gaps = 26/232 (11%)
Query: 3 VIVVTGRGGAGKTT-TANLSTYFAQAGYRVLAIDGDLYLPNLGLHFALDN-VKYTLHSIV 60
+++ +G+GG GKTT TAN+ T A+ G +VL ID D+ L NL + L+N + Y + ++
Sbjct: 5 IVITSGKGGVGKTTLTANIGTALAKLGKKVLLIDADIGLRNLDMILGLENRIVYDILDVL 64
Query: 61 KNPNMDPEWAIYRHEQ-TGVYVMPGSPRL-EDVLGVSGQRLKDVIENLKY--KYPVIFVD 116
+ + E A+ + ++ ++++P + R +DV+ + ++ +E +K Y I VD
Sbjct: 65 EG-RVPYEKALVKDKRGLSLWLLPANQRANKDVIDI--EKWNKTVEEIKNSGNYDYILVD 121
Query: 117 SPTGVPFDTLPAFESFNYQIIVVEIERSPIYSFETMVENEVLKLKALGDRFKLDVGVVIN 176
SP G+ A + +IVV E S I + ++ L K + V++N
Sbjct: 122 SPAGIEKGFQIAVSPADKALIVVNPEVSSIRDADRVI-------GLLESMDKRNYKVIVN 174
Query: 177 KV------REAADVIDKIVETIEEDIGVPVLGVIPFDDAVPESINVGIPVLV 222
++ R A ++ IV+ ++ +I +G+IP + + + N G P+++
Sbjct: 175 RIKWEMVKRGAMLSVEDIVDILKAEI----IGIIPEEPKLVDFTNRGEPIVL 222
>gb|AAG20269.1| (AE005101) cell division inhibitor; MinD2 [Halobacterium sp. NRC-1]
Length = 305
Score = 70.6 bits (170), Expect = 2e-11
Identities = 67/239 (28%), Positives = 106/239 (44%), Gaps = 22/239 (9%)
Query: 5 VVTGRGGAGKTTTA-NLSTYFAQAGYRVLAIDGDLYLPNLGLHFALD-NVKYTLHSIVKN 62
V +G+GG GKTTTA N++ A+A V+ +D DL + N+ A D + TLH ++ +
Sbjct: 8 VASGKGGVGKTTTAVNVAAVMAEADRSVVLVDADLGMANVDHVVACDESATATLHDVLAD 67
Query: 63 PNMDPEWAIYRHEQTGVYVMPGSPRLEDVLGVSGQRLKDVIENLKYKYPVIFVDSPTGVP 122
+ G V+ G + D L DV L+ +Y + VD+ G+
Sbjct: 68 DAALTDATAAA--PAGFDVIVGGTTITDFGRADPSALPDVAATLRDRYDCVIVDTGGGLS 125
Query: 123 FDTLPAFESFNYQIIVVEIERSPIYSFETMVENEVLKLKALGDRFKLDV-GVVINKVREA 181
DT + ++V + +T K +AL +R V G V+ +V +
Sbjct: 126 HDTTVPLGLADETVLVS--------TRQTAALANTAKTRALVERVGGHVAGAVVTRVTDD 177
Query: 182 ADVIDK-----IVETIEEDIGVPVLGVIPFDDAVPESINVGIPVLVYKPRSDAALAFKE 235
A D T++ DI LG+IP D V +S G P++ P S AA A++E
Sbjct: 178 AGGADAGHGDAAAATLQTDI----LGLIPEDSRVADSERAGTPLVSLAPESPAAQAYRE 232
>sp|O25098|MIND_HELPY SEPTUM SITE-DETERMINING PROTEIN MIND (CELL DIVISION INHIBITOR MIND)
>gi|7443731|pir||C64561 cell division inhibitor minD -
Helicobacter pylori (strain 26695)
>gi|2313432|gb|AAD07400.1| (AE000551) cell division
inhibitor (minD) [Helicobacter pylori 26695]
Length = 268
Score = 70.2 bits (169), Expect = 2e-11
Identities = 54/225 (24%), Positives = 114/225 (50%), Gaps = 5/225 (2%)
Query: 1 MAVIVVTGRGGAGK-TTTANLSTYFAQAGYRVLAIDGDLYLPNLGLHFALDN-VKYTLHS 58
+ V + +G+GG GK TTTANL+ A++G +V+A+D D+ L NL + L+N + Y +
Sbjct: 3 IVVTITSGKGGVGKSTTTANLAIGLAESGKKVVAVDFDIGLRNLDMILGLENRIVYDVVD 62
Query: 59 IVKNPNMDPEWAIYRHEQTGVYVMPGSPRLEDVLGVSGQRLKDVIENLKYKYPVIFVDSP 118
+++ N + A+ ++T + + +D + +++ +I L+ + I +DSP
Sbjct: 63 VMEK-NCNLSQALITDKKTKNLSFLAASQSKDKNILDKEKVAILINALRADFDYILIDSP 121
Query: 119 TGVPFDTLPAFESFNYQIIVVEIERSPIYSFETMVENEVLKLKALGDRFKLDVGVVINKV 178
G+ A + ++VV E S + + +V K ++ ++IN++
Sbjct: 122 AGIESGFEHAILHADMALVVVTPEVSSLRDSDRVVGIIDAKSNRAKKGMEVHKHLIINRL 181
Query: 179 REAADVIDKI--VETIEEDIGVPVLGVIPFDDAVPESINVGIPVL 221
+ ++ +E + + + +P++G+IP D + + N G PV+
Sbjct: 182 KPELVANGEMISIEEVLKILCLPLIGIIPEDHHIISATNKGEPVI 226
>sp|Q9ZMA8|MIND_HELPJ SEPTUM SITE-DETERMINING PROTEIN MIND (CELL DIVISION INHIBITOR MIND)
>gi|7443730|pir||B71945 cell division inhibitor -
Helicobacter pylori (strain J99)
>gi|4154852|gb|AAD05905.1| (AE001468) cell division
inhibitor [Helicobacter pylori J99]
Length = 268
Score = 69.1 bits (166), Expect = 5e-11
Identities = 53/225 (23%), Positives = 114/225 (50%), Gaps = 5/225 (2%)
Query: 1 MAVIVVTGRGGAGK-TTTANLSTYFAQAGYRVLAIDGDLYLPNLGLHFALDN-VKYTLHS 58
+ V + +G+GG GK TTTANL+ A++G +V+A+D D+ L NL + L+N + Y +
Sbjct: 3 IVVTITSGKGGVGKSTTTANLAIGLAESGKKVVAVDFDIGLRNLDMILGLENRIVYDVVD 62
Query: 59 IVKNPNMDPEWAIYRHEQTGVYVMPGSPRLEDVLGVSGQRLKDVIENLKYKYPVIFVDSP 118
+++ N + A+ ++T + + +D + +++ +I L+ + I +DSP
Sbjct: 63 VMEK-NCNLSQALITDKKTKNLSFLAASQSKDKNILDKEKVAILINALRADFDYILIDSP 121
Query: 119 TGVPFDTLPAFESFNYQIIVVEIERSPIYSFETMVENEVLKLKALGDRFKLDVGVVINKV 178
G+ A + ++VV E S + + ++ K ++ ++IN++
Sbjct: 122 AGIESGFEHAILHADMALVVVTPEVSSLRDSDRVIGIIDAKSNRAKSGEEVHKHLIINRL 181
Query: 179 REAADVIDKI--VETIEEDIGVPVLGVIPFDDAVPESINVGIPVL 221
+ ++ +E + + + +P++G+IP D + + N G PV+
Sbjct: 182 KPELVANGEMISIEEVLKILCLPLIGIIPEDHHIISATNKGEPVI 226
>pir||D75478 septum site-determining protein - Deinococcus radiodurans (strain
R1) >gi|6458463|gb|AAF10331.1|AE001931_2 (AE001931)
septum site-determining protein [Deinococcus
radiodurans]
Length = 276
Score = 68.7 bits (165), Expect = 6e-11
Identities = 57/237 (24%), Positives = 121/237 (51%), Gaps = 15/237 (6%)
Query: 3 VIVVTGRGGAGKTTT-ANLSTYFAQAGYRVLAIDGDLYLPNLGLHFALDN-VKYTLHSIV 60
++V +G+GG GKTTT AN+ A+ G +V+ ID D+ L NL + L++ V + L ++
Sbjct: 14 IVVTSGKGGVGKTTTTANIGAALARLGEKVVVIDVDVGLRNLDVVMGLESRVVFDLVDVL 73
Query: 61 KNPNMDPEWAIYRHEQTGVYVMPGSPRLEDVLGVSGQRLKDVIENL--KYKYPVIFVDSP 118
+ + I ++++P S + D + + K+V++ L + + + +DSP
Sbjct: 74 EGKCRMNQALIRDKRVENLHLLPAS-QTRDKDALDPEVFKEVVKGLLEEEGFDRVLIDSP 132
Query: 119 TGVPFDTLPAFESFNYQIIVVEIERSPIYSFETMVENEVLKLKALGDRFKLDVGVVINKV 178
G+ A ++VV E S + + ++ +L+ + + ++ +V+N++
Sbjct: 133 AGIESGFRTAAAPAEGALVVVNPEVSSVRDADRII--GLLEAQQI-----TEIRLVVNRL 185
Query: 179 REAADVIDKI--VETIEEDIGVPVLGVIPFDDAVPESINVGIPVLVYKPRS-DAALA 232
R + ++ + + +GV +G++P D+ + S NVG P ++ K ++ DA +A
Sbjct: 186 RPKMVASGNMLSIDDMVDILGVKPIGIVPEDEGIIVSTNVGEPAVLGKTKAGDAFMA 242
>pir||C82136 septum site-determining protein MinD VC1960 [imported] - Vibrio
cholerae (group O1 strain N16961)
>gi|9656499|gb|AAF95108.1| (AE004271) septum
site-determining protein MinD [Vibrio cholerae]
Length = 276
Score = 68.3 bits (164), Expect = 8e-11
Identities = 61/240 (25%), Positives = 118/240 (48%), Gaps = 10/240 (4%)
Query: 3 VIVVTGRGGAGKTTT-ANLSTYFAQAGYRVLAIDGDLYLPNLGLHFALDN-VKYTLHSIV 60
++V +G+GG GKTT+ A +++ A G + ID D+ L NL L + V Y +++
Sbjct: 11 IVVTSGKGGVGKTTSSAAIASGLALRGKKTAVIDFDIGLRNLDLIMGCERRVVYDFVNVI 70
Query: 61 KNPNMDPEWAIYRHEQTGVYVMPGSP-RLEDVLGVSG-QRLKDVIENLKYKYPVIFVDSP 118
+ I ++++P S R +D L G QR+ + ++ + + + I DSP
Sbjct: 71 NGEATLNQALIKDKRNENLFILPASQTRDKDALTKDGVQRVLNDLKEMGFDF--IICDSP 128
Query: 119 TGVPFDTLPAFESFNYQIIVVEIERSPIYSFETMVEN-EVLKLKALGDRFKLDVGVVINK 177
G+ L A + I+ E S + + ++ + ++A + + +++ +
Sbjct: 129 AGIEQGALMALYYADEAIVTTNPEVSSVRDSDRILGILDSKSMRAEQGQAPIKQHLLLTR 188
Query: 178 VREAADVIDKI--VETIEEDIGVPVLGVIPFDDAVPESINVGIPVLVYKPRSDAALAFKE 235
A ++ V+ +EE + VP+LGVIP AV + N G+PV ++ +SDA A+++
Sbjct: 189 YNPARVTQGEMLSVQDVEEILHVPLLGVIPESQAVLNASNKGVPV-IFDDQSDAGQAYQD 247
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.319 0.140 0.402
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 96529841
Number of Sequences: 2977
Number of extensions: 4254788
Number of successful extensions: 13993
Number of sequences better than 1.0e-10: 30
Number of HSP's better than 0.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 28
Number of HSP's that attempted gapping in prelim test: 13925
Number of HSP's gapped (non-prelim): 31
length of query: 251
length of database: 189,106,746
effective HSP length: 55
effective length of query: 196
effective length of database: 156,189,961
effective search space: 30613232356
effective search space used: 30613232356
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 164 (68.3 bits)