BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB2113 (PAB2113) DE:Hypothetical protein
(238 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||D75149 hypothetical protein PAB2113 - Pyrococcus abyssi (st... 467 e-131
pir||D71189 hypothetical protein PH1788 - Pyrococcus horikoshii ... 443 e-123
pir||T48662 acetate--CoA ligase (ADP-forming) (EC 6.2.1.13) beta... 259 2e-68
pir||H75142 succinyl-coa synthetase, beta chain related protein ... 259 2e-68
pir||F71182 hypothetical protein PH1739 - Pyrococcus horikoshii ... 235 5e-61
gi|11498810 conserved hypothetical protein [Archaeoglobus fulgid... 213 1e-54
gi|11498537 conserved hypothetical protein [Archaeoglobus fulgid... 197 1e-49
gi|11498792 conserved hypothetical protein [Archaeoglobus fulgid... 195 3e-49
gi|11499522 conserved hypothetical protein [Archaeoglobus fulgid... 193 2e-48
sp|Q58010|Y590_METJA HYPOTHETICAL PROTEIN MJ0590 >gi|2128020|pir... 192 3e-48
pir||T35770 hypothetical protein SC8A6.03c SC8A6.03c - Streptomy... 185 3e-46
emb|CAC12278.1| (AL445066) probable acetyl-CoA synthetase [Therm... 175 3e-43
emb|CAA10043.1| (AJ012480) pimeloyl-CoA synthetase [Pseudomonas ... 168 4e-41
gb|AAF88064.1|AF286346_1 (AF286346) acetyl-CoA synthetase [Entam... 164 8e-40
gb|AAD44021.1|AF107206_1 (AF107206) acetyl-CoA synthetase [Giard... 162 3e-39
gb|AAG19369.1| (AE005031) acetyl-CoA synthetase; Acs3 [Halobacte... 159 4e-38
pir||B83518 pimeloyl-CoA synthetase PA1017 [imported] - Pseudomo... 157 1e-37
gi|11499106 conserved hypothetical protein [Archaeoglobus fulgid... 145 5e-34
gb|AAK42002.1| Conserved hypothetical protein [Sulfolobus solfat... 142 4e-33
pir||H83024 hypothetical protein PA4978 [imported] - Pseudomonas... 125 6e-28
pir||T35878 hypothetical protein SC9B10.09 - Streptomyces coelic... 118 4e-26
sp|P76594|YFIQ_ECOLI HYPOTHETICAL 98.0 KD PROTEIN IN UNG-PSSA IN... 101 8e-21
pir||C82443 conserved hypothetical protein VCA0574 [imported] - ... 101 1e-20
dbj|BAA10925.1| (D64044) hypothetycal 67KD protein fragment in U... 88 1e-16
>pir||D75149 hypothetical protein PAB2113 - Pyrococcus abyssi (strain Orsay)
>gi|5457785|emb|CAB49275.1| (AJ248284) hypothetical
protein [Pyrococcus abyssi]
Length = 238
Score = 467 bits (1190), Expect = e-131
Identities = 238/238 (100%), Positives = 238/238 (100%)
Query: 1 MKEEAVKVIEAVLEQGRTAMVEYEAKQVLKAYGLPVPEEKLAKTLDEALEYAKEIGYPVV 60
MKEEAVKVIEAVLEQGRTAMVEYEAKQVLKAYGLPVPEEKLAKTLDEALEYAKEIGYPVV
Sbjct: 1 MKEEAVKVIEAVLEQGRTAMVEYEAKQVLKAYGLPVPEEKLAKTLDEALEYAKEIGYPVV 60
Query: 61 MKLMSPQILHKSDARVVMLNIKDEEELKKKWEEIHENAKKYNPNAEILGVLIAPMLKPGR 120
MKLMSPQILHKSDARVVMLNIKDEEELKKKWEEIHENAKKYNPNAEILGVLIAPMLKPGR
Sbjct: 61 MKLMSPQILHKSDARVVMLNIKDEEELKKKWEEIHENAKKYNPNAEILGVLIAPMLKPGR 120
Query: 121 EVIIGVTEDPQFGHAIMFGLGGIFVEILKDVTFRLVPITEKDARKMITEIKAYPILAGAR 180
EVIIGVTEDPQFGHAIMFGLGGIFVEILKDVTFRLVPITEKDARKMITEIKAYPILAGAR
Sbjct: 121 EVIIGVTEDPQFGHAIMFGLGGIFVEILKDVTFRLVPITEKDARKMITEIKAYPILAGAR 180
Query: 181 GEEPADIDAIVDMLLKVSKLVDELRDYIKEMDLNPIFVYNKGEGAVIVDARIILKQRA 238
GEEPADIDAIVDMLLKVSKLVDELRDYIKEMDLNPIFVYNKGEGAVIVDARIILKQRA
Sbjct: 181 GEEPADIDAIVDMLLKVSKLVDELRDYIKEMDLNPIFVYNKGEGAVIVDARIILKQRA 238
>pir||D71189 hypothetical protein PH1788 - Pyrococcus horikoshii
>gi|3258224|dbj|BAA30907.1| (AP000007) 238aa long
hypothetical protein [Pyrococcus horikoshii]
Length = 238
Score = 443 bits (1126), Expect = e-123
Identities = 221/237 (93%), Positives = 233/237 (98%)
Query: 1 MKEEAVKVIEAVLEQGRTAMVEYEAKQVLKAYGLPVPEEKLAKTLDEALEYAKEIGYPVV 60
MKEEAV+VIE VL+QGRTAMVEYEAKQVLKAYGLPVPEEKLAKTLDEALEYAKEIGYPVV
Sbjct: 1 MKEEAVRVIEEVLKQGRTAMVEYEAKQVLKAYGLPVPEEKLAKTLDEALEYAKEIGYPVV 60
Query: 61 MKLMSPQILHKSDARVVMLNIKDEEELKKKWEEIHENAKKYNPNAEILGVLIAPMLKPGR 120
+KLMSPQILHKSDA+VVMLNIK+EEELKKKWEEIHENAKKY P+AEILGVL+APMLKPGR
Sbjct: 61 LKLMSPQILHKSDAKVVMLNIKNEEELKKKWEEIHENAKKYRPDAEILGVLVAPMLKPGR 120
Query: 121 EVIIGVTEDPQFGHAIMFGLGGIFVEILKDVTFRLVPITEKDARKMITEIKAYPILAGAR 180
EVIIGVTEDPQFGHAIMFGLGGIFVEILKDVTFRLVPITEKDARKMI EIKAYPILAGAR
Sbjct: 121 EVIIGVTEDPQFGHAIMFGLGGIFVEILKDVTFRLVPITEKDARKMIQEIKAYPILAGAR 180
Query: 181 GEEPADIDAIVDMLLKVSKLVDELRDYIKEMDLNPIFVYNKGEGAVIVDARIILKQR 237
GEEPADIDAIVDMLLKVSKLVD+L+DYIKEMDLNP+FVYNKGEGAVIVD+RIILK +
Sbjct: 181 GEEPADIDAIVDMLLKVSKLVDDLKDYIKEMDLNPVFVYNKGEGAVIVDSRIILKPK 237
>pir||T48662 acetate--CoA ligase (ADP-forming) (EC 6.2.1.13) beta chain
[validated] - Pyrococcus furiosus
>gi|5419968|emb|CAB46517.1| (AJ240062) acetyl-CoA
synthetase [Pyrococcus furiosus]
Length = 232
Score = 259 bits (656), Expect = 2e-68
Identities = 131/231 (56%), Positives = 183/231 (78%), Gaps = 4/231 (1%)
Query: 4 EAVKVIEAVLEQGRTAMVEYEAKQVLKAYGLPVPEEKLAKTLDEALEYAKEIGYPVVMKL 63
+A ++IE + R +VE EAK++LK YG+PVPE K+A+ +EA++++ EIGYPVVMK+
Sbjct: 6 KAREIIEKAKAENRP-LVEPEAKEILKLYGIPVPEFKVARNEEEAVKFSGEIGYPVVMKI 64
Query: 64 MSPQILHKSDARVVMLNIKDEEELKKKWEEIHENAKKYNPNAEILGVLIAPMLKPGREVI 123
+SPQI+HKSDA V +NIK++EE ++ + I +NA+ Y P+A++ GV+I ML GREVI
Sbjct: 65 VSPQIIHKSDAGGVKINIKNDEEAREAFRTIMQNARNYKPDADLWGVIIYRMLPLGREVI 124
Query: 124 IGVTEDPQFGHAIMFGLGGIFVEILKDVTFRLVPITEKDARKMITEIKAYPILAGARGEE 183
+G+ DPQFG A+MFGLGGIFVEILKDV+FR+ PIT++DA +MI EIKAYPILAGARGE+
Sbjct: 125 VGMIRDPQFGPAVMFGLGGIFVEILKDVSFRVAPITKEDALEMIREIKAYPILAGARGEK 184
Query: 184 PADIDAIVDMLLKVSKLVDELRDYIKEMDLNPIFVYNKGEGAVIVDARIIL 234
P +I+A+ D+++KV +L EL + IKE+D+NPIF Y + A+ VDAR+IL
Sbjct: 185 PVNIEALADIIVKVGELALELPE-IKEIDINPIFAYE--DSAIAVDARMIL 232
>pir||H75142 succinyl-coa synthetase, beta chain related protein PAB0203 -
Pyrococcus abyssi (strain Orsay)
>gi|5457733|emb|CAB49223.1| (AJ248284) SUCCINYL-COA
SYNTHETASE, BETA SUBUNIT related protein [Pyrococcus
abyssi]
Length = 232
Score = 259 bits (655), Expect = 2e-68
Identities = 129/231 (55%), Positives = 185/231 (79%), Gaps = 4/231 (1%)
Query: 4 EAVKVIEAVLEQGRTAMVEYEAKQVLKAYGLPVPEEKLAKTLDEALEYAKEIGYPVVMKL 63
+A ++IE + R +VE EAK++LK YG+P+PE K+A+ +EA+++++EIGYPVVMK+
Sbjct: 6 KAREIIEKAKAENRP-LVEPEAKEILKLYGIPIPEFKVARDEEEAVKFSREIGYPVVMKI 64
Query: 64 MSPQILHKSDARVVMLNIKDEEELKKKWEEIHENAKKYNPNAEILGVLIAPMLKPGREVI 123
+SPQI+HKSDA V +NIK++EE ++ + I ENA++Y P+A++ GV+I ML G+EVI
Sbjct: 65 VSPQIIHKSDAGGVKINIKNDEEAREAFRTIMENARRYKPDADLWGVIIYRMLPLGKEVI 124
Query: 124 IGVTEDPQFGHAIMFGLGGIFVEILKDVTFRLVPITEKDARKMITEIKAYPILAGARGEE 183
+G+ DPQFG A+MFGLGGIFVEILKDV+FR+ PI+++DA +MI EIKAYPILAGARGE+
Sbjct: 125 VGMIRDPQFGPAVMFGLGGIFVEILKDVSFRVAPISKEDALEMIKEIKAYPILAGARGEK 184
Query: 184 PADIDAIVDMLLKVSKLVDELRDYIKEMDLNPIFVYNKGEGAVIVDARIIL 234
P +IDA+ D+++KV +L EL + I+E+D+NPIF Y + AV VDAR++L
Sbjct: 185 PVNIDALADIIVKVGELALELPE-IRELDINPIFAYE--DEAVAVDARMLL 232
>pir||F71182 hypothetical protein PH1739 - Pyrococcus horikoshii
>gi|3258170|dbj|BAA30853.1| (AP000007) 212aa long
hypothetical protein [Pyrococcus horikoshii]
Length = 212
Score = 235 bits (592), Expect = 5e-61
Identities = 113/199 (56%), Positives = 161/199 (80%), Gaps = 1/199 (0%)
Query: 5 AVKVIEAVLEQGRTAMVEYEAKQVLKAYGLPVPEEKLAKTLDEALEYAKEIGYPVVMKLM 64
A ++IE + R+ +VE EAK++LK YG+P+PE K+A+ +EA+++++EIGYPVVMK++
Sbjct: 7 AREIIEKAKAENRS-LVEPEAKEILKLYGIPIPEFKVARNEEEAVKFSREIGYPVVMKIV 65
Query: 65 SPQILHKSDARVVMLNIKDEEELKKKWEEIHENAKKYNPNAEILGVLIAPMLKPGREVII 124
SPQI+HKSDA V +NIK++EE ++ + I ENA++Y P+A++ GV+I ML GREVI+
Sbjct: 66 SPQIIHKSDAGGVKINIKNDEEAREAFRTIMENARRYKPDADLWGVIIYKMLPLGREVIV 125
Query: 125 GVTEDPQFGHAIMFGLGGIFVEILKDVTFRLVPITEKDARKMITEIKAYPILAGARGEEP 184
G+ DPQFG A+MFGLGGIFVEILKDV+FR+ PI++ DA +MI EIKAYPILAGARGE+P
Sbjct: 126 GMIRDPQFGPAVMFGLGGIFVEILKDVSFRVAPISKDDALEMIKEIKAYPILAGARGEKP 185
Query: 185 ADIDAIVDMLLKVSKLVDE 203
+I+A+ D+++KV +L E
Sbjct: 186 VNIEALADIIVKVGELALE 204
>gi|11498810 conserved hypothetical protein [Archaeoglobus fulgidus]
>gi|7448044|pir||B69401 conserved hypothetical protein
AF1211 - Archaeoglobus fulgidus
>gi|2649370|gb|AAB90033.1| (AE001020) conserved
hypothetical protein [Archaeoglobus fulgidus]
Length = 685
Score = 213 bits (537), Expect = 1e-54
Identities = 113/233 (48%), Positives = 163/233 (69%), Gaps = 5/233 (2%)
Query: 2 KEEAVKVIEAVLEQGRTAMVEYEAKQVLKAYGLPVPEEKLAKTLDEALEYAKEIGYPVVM 61
+E+A ++IE +LE G +V E VL+AYG+ V +A+ +DEA + A+ IGYPVV+
Sbjct: 454 REKAEEIIEKLLESGGR-VVGAEGLPVLEAYGIEVAPYGIARNVDEARDIAESIGYPVVL 512
Query: 62 KLMSPQILHKSDARVVMLNIKDEEELKKKWEEIHENAKKYNPNAEILGVLIAPMLKPGRE 121
K++SP ++HKSD V LN+ E +L+K + EI N + P A I GVL+ M+ G+E
Sbjct: 513 KVVSPDVVHKSDVGGVKLNV-GENDLEKAFFEILSNVEGRMPKARIEGVLVQKMVDGGKE 571
Query: 122 VIIGVTEDPQFGHAIMFGLGGIFVEILKDVTFRLVPITEKDARKMITEIKAYPILAGARG 181
+I+G+ DPQFG IMFG+GG++VE+LKDV+FR+ PIT ++A +M+ E+KAY IL G RG
Sbjct: 572 LIVGMKRDPQFGPMIMFGMGGVYVEVLKDVSFRIAPITRREAHEMVREVKAYRILRGLRG 631
Query: 182 EEPADIDAIVDMLLKVSKLVDELRDYIKEMDLNPIFVYNKGEGAVIVDARIIL 234
E+PADIDAI D+LL+VSKL + + EMDLNP+ V+ G +VD R++L
Sbjct: 632 EKPADIDAIADLLLRVSKLSLD-HPEVLEMDLNPVKVFE--SGYAVVDFRMVL 681
>gi|11498537 conserved hypothetical protein [Archaeoglobus fulgidus]
>gi|7483066|pir||D69366 conserved hypothetical protein
AF0932 - Archaeoglobus fulgidus
>gi|2649664|gb|AAB90306.1| (AE001039) conserved
hypothetical protein [Archaeoglobus fulgidus]
Length = 666
Score = 197 bits (495), Expect = 1e-49
Identities = 103/218 (47%), Positives = 158/218 (72%), Gaps = 12/218 (5%)
Query: 20 MVEYEAKQVLKAYGLPVPEEKLAKTLDEALEYAKEIGYPVVMKLMSPQILHKSDARVVML 79
++E+E+K +L+ YG+ + +T ++A++ AKEIG+PVVMK+ +I+HKSD V+L
Sbjct: 4 LLEHESKALLEKYGIKTAKCIFCETEEQAVKAAKEIGFPVVMKVAGREIIHKSDVGGVIL 63
Query: 80 NIKDEEELKKKWEEIHENAKKYNPNAEILGVLIAPMLKPGREVIIGVTEDPQFGHAIMFG 139
N+K E+E+++ ++ + P AE GV I P L+ G EVIIGV E+ QFG MFG
Sbjct: 64 NVKSEDEVREVFQRLMSI-----PKAE--GVNIQPQLEKGIEVIIGVAENEQFGSVAMFG 116
Query: 140 LGGIFVEILKDVTFRLVPITEKDARKMITEIKAYPILAGARGEEPADIDAIVDMLLKVSK 199
LGG+FVE+LKDV+FRL+P+T +DA +M+ E+K Y +L G RG + D+ A+VD+LLK+++
Sbjct: 117 LGGVFVEVLKDVSFRLLPLTRRDAEEMVREVKGYKLLEGYRGVK-GDVGAVVDLLLKLNE 175
Query: 200 LVDELRDYIKEMDLNPIFVYNKGEGAVIVDARIILKQR 237
+V+ ++ I EMDLNP+FVY + GAV+VDARI++ +R
Sbjct: 176 VVE--KEGIVEMDLNPVFVYER--GAVVVDARIVVGER 209
>gi|11498792 conserved hypothetical protein [Archaeoglobus fulgidus]
>gi|7483097|pir||G69398 conserved hypothetical protein
AF1192 - Archaeoglobus fulgidus
>gi|2649402|gb|AAB90053.1| (AE001022) conserved
hypothetical protein [Archaeoglobus fulgidus]
Length = 664
Score = 195 bits (491), Expect = 3e-49
Identities = 101/218 (46%), Positives = 156/218 (71%), Gaps = 12/218 (5%)
Query: 20 MVEYEAKQVLKAYGLPVPEEKLAKTLDEALEYAKEIGYPVVMKLMSPQILHKSDARVVML 79
++E+E+K +L+ YG+ + +T ++A++ AKEIG+PVVMK+ +I+HKSD V+L
Sbjct: 3 LLEHESKALLEKYGIKTAKCIFCETEEQAVKAAKEIGFPVVMKVAGREIVHKSDVGGVIL 62
Query: 80 NIKDEEELKKKWEEIHENAKKYNPNAEILGVLIAPMLKPGREVIIGVTEDPQFGHAIMFG 139
N+K E+E+++ ++ + P AE GV + P L+ G EVI+GV E+ QFG MFG
Sbjct: 63 NVKSEDEVREVFQRLMSI-----PKAE--GVNVQPQLEKGIEVIVGVAENEQFGSVAMFG 115
Query: 140 LGGIFVEILKDVTFRLVPITEKDARKMITEIKAYPILAGARGEEPADIDAIVDMLLKVSK 199
LGG+FVE+LKDV+FRL+P+T +DA +M+ E+K Y +L G RG D+ A+VD+LLK+++
Sbjct: 116 LGGVFVEVLKDVSFRLLPLTRRDAEEMVREVKGYKLLEGYRGVR-GDVGAVVDLLLKLNE 174
Query: 200 LVDELRDYIKEMDLNPIFVYNKGEGAVIVDARIILKQR 237
+V+ R+ I EMDLNP+FVY + GAV+ DARI++ +R
Sbjct: 175 VVE--RESIVEMDLNPVFVYER--GAVVADARIVVGER 208
>gi|11499522 conserved hypothetical protein [Archaeoglobus fulgidus]
>gi|7483184|pir||A69492 conserved hypothetical protein
AF1938 - Archaeoglobus fulgidus
>gi|2648606|gb|AAB89317.1| (AE000970) conserved
hypothetical protein [Archaeoglobus fulgidus]
Length = 673
Score = 193 bits (485), Expect = 2e-48
Identities = 101/218 (46%), Positives = 155/218 (70%), Gaps = 12/218 (5%)
Query: 20 MVEYEAKQVLKAYGLPVPEEKLAKTLDEALEYAKEIGYPVVMKLMSPQILHKSDARVVML 79
++E+E+K +L+ YG+ + +T ++A++ AKEIG+PVVMK+ +I+HKSD V+L
Sbjct: 3 LLEHESKALLEKYGIKTAKCIFCETEEQAVKAAKEIGFPVVMKVAGREIVHKSDVGGVIL 62
Query: 80 NIKDEEELKKKWEEIHENAKKYNPNAEILGVLIAPMLKPGREVIIGVTEDPQFGHAIMFG 139
N+K E+E+++ ++ + P AE GV I P L+ G EVI+GV E+ QFG MFG
Sbjct: 63 NVKSEDEVREVFQRLMSI-----PKAE--GVNIQPQLEKGIEVIVGVAENEQFGSVAMFG 115
Query: 140 LGGIFVEILKDVTFRLVPITEKDARKMITEIKAYPILAGARGEEPADIDAIVDMLLKVSK 199
LGG+FVE+LKDV+FRL+P+T +DA +M+ E+K Y +L G R D+ A+VD+LLK+++
Sbjct: 116 LGGVFVEVLKDVSFRLLPLTRRDAEEMVREVKGYKLLEGYR-RVKGDVGAVVDLLLKLNE 174
Query: 200 LVDELRDYIKEMDLNPIFVYNKGEGAVIVDARIILKQR 237
+V+ R+ I EMDLNP+FVY + GAV+ DARI++ +R
Sbjct: 175 VVE--RESIVEMDLNPVFVYER--GAVVADARIVVGER 208
>sp|Q58010|Y590_METJA HYPOTHETICAL PROTEIN MJ0590 >gi|2128020|pir||F64373 hypothetical
protein homolog MJ0590 - Methanococcus jannaschii
>gi|1591298|gb|AAB98580.1| (U67507) conserved
hypothetical protein [Methanococcus jannaschii]
Length = 704
Score = 192 bits (483), Expect = 3e-48
Identities = 112/242 (46%), Positives = 158/242 (65%), Gaps = 14/242 (5%)
Query: 1 MKEEAVKVIEA---VLEQGRTAMVEYEAKQVLKAYGLPVPEEKLAKTLDEALEYAKEIGY 57
+KEE +K+ E ++++ + EY AK++L YGLPVP+ LAK DEALEY K++G
Sbjct: 467 IKEEFIKITEENKEIIKELLSNPNEYTAKKLLSIYGLPVPKGYLAKNEDEALEYCKKLG- 525
Query: 58 PVVMKLMSPQILHKSDARVVMLNIKDEEELKKKWEEIHENAKKYNP-----NAEILGVLI 112
VMK++SPQI+HK++A V++N K+ +E KK + ENAK+Y N I GVL+
Sbjct: 526 KCVMKIVSPQIIHKTEAGGVIINPKNPKEAFKK---LIENAKEYAKRMGIDNLIIEGVLV 582
Query: 113 APML-KPGREVIIGVTEDPQFGHAIMFGLGGIFVEILKDVTFRLVPITEKDARKMITEIK 171
+ K E+IIG D FG +M GLGG+FVE+LKDV+F + PIT A +M+ E+K
Sbjct: 583 EEFIEKDMMEIIIGAKRDDIFGSVVMVGLGGVFVEVLKDVSFGISPITRDFAHEMLRELK 642
Query: 172 AYPILAGARGEEPADIDAIVDMLLKVSKLVDELRDYIKEMDLNPIFVYNKGEGAVIVDAR 231
+Y +L G RG DI+ IVD L+K+ +D + IKE+DLNP+FV+N+ EG I DAR
Sbjct: 643 SYKVLEGVRGRPKRDINFIVDTLIKIGVFMD-IHKEIKELDLNPVFVFNEKEGGCIGDAR 701
Query: 232 II 233
II
Sbjct: 702 II 703
>pir||T35770 hypothetical protein SC8A6.03c SC8A6.03c - Streptomyces coelicolor
>gi|3288603|emb|CAA19775.1| (AL031013) hypothetical
protein SC8A6.03c [Streptomyces coelicolor A3(2)]
Length = 714
Score = 185 bits (466), Expect = 3e-46
Identities = 98/227 (43%), Positives = 146/227 (64%), Gaps = 3/227 (1%)
Query: 8 VIEAVLEQGRTAMVEYEAKQVLKAYGLPVPEEKLAKTLDEALEYAKEIGYPVVMKLMSPQ 67
+++AV +GRTA+ E K + AYG+ VP E+LA+ +DEA+ A G PVVMK++SP
Sbjct: 12 LLDAVRGEGRTALTAPEGKVLADAYGIAVPGEELARDVDEAVACAARFGGPVVMKIVSPD 71
Query: 68 ILHKSDARVVMLNIKDEEELKKKWEEIHENAKKYNPNAEILGVLIAPMLKPGREVIIGVT 127
ILHK+DA V++ ++ +++ + I +NA+ Y+ +A I GV I +L G+EVI+G
Sbjct: 72 ILHKTDAGGVVVGVEGAADVRAAFCRIVDNARAYDASARIEGVQIQELLPQGQEVIVGAV 131
Query: 128 EDPQFGHAIMFGLGGIFVEILKDVTFRLVPITEKDARKMITEIKAYPILAGARGEEPADI 187
DP FG + FGLGG+ VE+LKDVTFRL P+ +A M+ I+A +L G RG+ D
Sbjct: 132 TDPTFGKVVAFGLGGVLVEVLKDVTFRLAPVDADEALSMLDSIRAAEVLRGVRGQAGVDR 191
Query: 188 DAIVDMLLKVSKLVDELRDYIKEMDLNPIFVYNKGEGAVIVDARIIL 234
A+ + + +VS+LV + + I E+DLNP+ EGAV D R+IL
Sbjct: 192 WAVAEQIRRVSELVADFPE-IAEVDLNPVIA--TPEGAVAADIRVIL 235
>emb|CAC12278.1| (AL445066) probable acetyl-CoA synthetase [Thermoplasma
acidophilum]
Length = 698
Score = 175 bits (440), Expect = 3e-43
Identities = 91/221 (41%), Positives = 140/221 (63%), Gaps = 3/221 (1%)
Query: 14 EQGRTAMVEYEAKQVLKAYGLPVPEEKLAKTLDEALEYAKEIGYPVVMKLMSPQILHKSD 73
+ G ++ E E+K++ +AYG+ V + +LAK+ DE K+ YPVV+K+ SP I+HK+D
Sbjct: 481 QAGVKSLNELESKEIFEAYGIKVNKTELAKSRDELKSLLKDFKYPVVLKIQSPDIVHKTD 540
Query: 74 ARVVMLNIKDEEELKKKWEEIHENAKKYNPNAEILGVLIAPMLKPGREVIIGVTEDPQFG 133
V++N+KD++E K ++ I N K P A I GV++ M + E IIG DP FG
Sbjct: 541 VGGVIVNVKDQDEALKAYDTIISNVKANAPQARIDGVVVEEMFRGDLETIIGTVNDPTFG 600
Query: 134 HAIMFGLGGIFVEILKDVTFRLVPITEKDARKMITEIKAYPILAGARGEEPADIDAIVDM 193
+MFGLGG VE+L+DV+FR+ P+ EK+A MI + A ++ RG P ++DA+VD
Sbjct: 601 PTVMFGLGGTAVEVLEDVSFRVAPVCEKEAYDMIRDTVAGKMMQKFRGRGPLNVDAVVDQ 660
Query: 194 LLKVSKLVDELRDYIKEMDLNPIFVYNKGEGAVIVDARIIL 234
+++ S L + IK +D NP+ V +GA++VDARI+L
Sbjct: 661 IIRFSWLAYD-HPEIKGIDANPMIV--SEDGAIVVDARIML 698
>emb|CAA10043.1| (AJ012480) pimeloyl-CoA synthetase [Pseudomonas mendocina]
Length = 711
Score = 168 bits (422), Expect = 4e-41
Identities = 88/217 (40%), Positives = 136/217 (62%)
Query: 22 EYEAKQVLKAYGLPVPEEKLAKTLDEALEYAKEIGYPVVMKLMSPQILHKSDARVVMLNI 81
E EAKQ+L G+ E++ K+ EA +A++IG+PVV+K+ S ILHKS+ V+LN+
Sbjct: 490 EAEAKQLLARAGIESAPERVLKSAAEAAAFAEQIGFPVVLKIASADILHKSEIGGVLLNV 549
Query: 82 KDEEELKKKWEEIHENAKKYNPNAEILGVLIAPMLKPGREVIIGVTEDPQFGHAIMFGLG 141
+ +++ + + E A ++ P+A + GVL+A L+ G E +G+ DPQFG +FGLG
Sbjct: 550 GSAQAVREGYALLLERAAEHAPHARLDGVLVARQLQGGVECFMGIQRDPQFGPVAVFGLG 609
Query: 142 GIFVEILKDVTFRLVPITEKDARKMITEIKAYPILAGARGEEPADIDAIVDMLLKVSKLV 201
GIFVE+LKDV FR P +A +MI IK P+L GARG DI A+ +L ++S+
Sbjct: 610 GIFVEVLKDVVFRRCPFGVGEAEQMIRSIKGAPLLLGARGRPVTDIKALSRVLSQLSQFA 669
Query: 202 DELRDYIKEMDLNPIFVYNKGEGAVIVDARIILKQRA 238
E ++ +DLNP+F +G+GA DA + +++ A
Sbjct: 670 AEAGPRLRSVDLNPVFAMPEGQGAWAADAVLEVQEVA 706
>gb|AAF88064.1|AF286346_1 (AF286346) acetyl-CoA synthetase [Entamoeba histolytica]
Length = 713
Score = 164 bits (411), Expect = 8e-40
Identities = 90/232 (38%), Positives = 139/232 (59%), Gaps = 3/232 (1%)
Query: 3 EEAVKVIEAVLEQGRTAMVEYEAKQVLKAYGLPVPEEKLAKTLDEALEYAKEIGYPVVMK 62
E A K+I V+ GRT EYE K + YG+P+ A T DEA+ A +IG PVVMK
Sbjct: 466 EGAKKLIADVVADGRTTFTEYEGKMMFSKYGIPIKGMAKASTEDEAVAEAMKIGTPVVMK 525
Query: 63 LMSPQILHKSDARVVMLNIKDEEELKKKWEEIHENAKKYNPNAEILGVLIAPMLKPGREV 122
++SP I+HK+D V + + EEE++K + +I + K+ P A I GVL+ M+ E
Sbjct: 526 ILSPDIMHKTDVGGVKVKLTTEEEIRKAYRDIMTSVKEKKPEARIHGVLLEKMVGFKYEC 585
Query: 123 IIGVTEDPQFGHAIMFGLGGIFVEILKDVTFRLVPITEKDARKMITEIKAYPILAGARGE 182
IIG +DP FG I+FG+GG+ VE+ KD L PI ++A ++I K +L G RG
Sbjct: 586 IIGCKKDPLFGPVIVFGMGGVTVELYKDTNIALPPIGLQEADRLIDGTKISKLLRGYRGM 645
Query: 183 EPADIDAIVDMLLKVSKLVDELRDYIKEMDLNPIFVYNKGEGAVIVDARIIL 234
D++ + +L++ SK++ + + I E+D+NP+ V E +++DA+I+L
Sbjct: 646 PACDVEGLKKILVQFSKMIMDFPE-ISEVDINPLAV--SYEEFLVLDAKIVL 694
>gb|AAD44021.1|AF107206_1 (AF107206) acetyl-CoA synthetase [Giardia intestinalis]
Length = 726
Score = 162 bits (406), Expect = 3e-39
Identities = 94/244 (38%), Positives = 138/244 (56%), Gaps = 13/244 (5%)
Query: 3 EEAVKVIEAVLEQGRTAMVEYEAKQVLKAYGLPVPEEKLAKTLDEALEYAKEIGYPVVMK 62
E K+I GRT ++ +E ++ YG+ P+ KLA EA +AKE+ +PVVMK
Sbjct: 482 ERIKKIIAGARADGRTVLLSHETSEIFTLYGVNAPKTKLATNEAEAATFAKEVTFPVVMK 541
Query: 63 LMSPQILHKSDARVVMLNIKDEEELKKKWEEIHENAKKYNPNAEIL-GVLIAPML----- 116
++SPQI+HKSD V LNIK E E ++EI NA K P +L GV I M+
Sbjct: 542 IVSPQIIHKSDCGGVKLNIKTEAEATAAFKEIMANAAKNGPKGAVLKGVEIQQMVDFSKY 601
Query: 117 KPGREVIIGVTEDPQFGHAIMFGLGGIFVEILKDVTFRLV-PITEKDARKMITEIKAYPI 175
+ E+I+GV DP +G IM G GGI+ +KDV F L +DA + + K Y I
Sbjct: 602 QKTTEMIVGVNRDPTWGPMIMVGQGGIYANYIKDVAFDLAYKYDREDAEAQLKKTKIYEI 661
Query: 176 LAGARGEEPADIDAIVDMLLKVSKLVDELRDYIKEMDLNPIFVY-----NKGEGAVIVDA 230
L G RG+ +DI ++D ++K+++LV++ + I E+D+NP+ V+ K G VD
Sbjct: 662 LNGVRGQPRSDIKGLLDTMVKLAQLVNDFSE-ITELDMNPLLVFEEQKEGKNPGIAAVDV 720
Query: 231 RIIL 234
+I L
Sbjct: 721 KITL 724
>gb|AAG19369.1| (AE005031) acetyl-CoA synthetase; Acs3 [Halobacterium sp. NRC-1]
Length = 542
Score = 159 bits (397), Expect = 4e-38
Identities = 87/235 (37%), Positives = 144/235 (61%), Gaps = 7/235 (2%)
Query: 2 KEEAVKVIEAVLEQGRTAMVEYEAKQVLKAYGLPVPEEKLAKTLDEALEYAKEIGYPVVM 61
++ A ++E ++G T + EA +L AYG+P P + + D A A++I VVM
Sbjct: 308 RDAARDILEDAADRGATRL-GVEAMDLLDAYGIPTPTGDVVDSPDAARRVARDIEGDVVM 366
Query: 62 KLMSPQILHKSDARVVMLNIKDEEELKKKWEEIHENAKKYNPNAEILGVLIAPMLK--PG 119
K++SP ILHKSD V + + + + + +E++ A Y P+A ILG+ + M+ G
Sbjct: 367 KIVSPDILHKSDIGGVKVGV-ETDAVADAYEDLITRATNYQPDATILGIQVQEMVDVDAG 425
Query: 120 REVIIGVTEDPQFGHAIMFGLGGIFVEILKDVTFRLVPITEKDARKMITEIKAYPILAGA 179
E I+G+ DPQFG ++FGLGGIFVEIL+D + R+ P++E++A MI ++ + P+L GA
Sbjct: 426 TETILGMNRDPQFGPLLLFGLGGIFVEILEDTSVRVAPVSEREAGDMIDDLDSAPLLRGA 485
Query: 180 RGEEPADIDAIVDMLLKVSKLVDELRDYIKEMDLNPIFVYNKGEGAVIVDARIIL 234
RG +PAD AI + + ++S+LV + I E+D+NP+ G+ A +D ++ +
Sbjct: 486 RGRDPADEAAITEAIQRLSQLVTDF-PAILELDVNPLLA--TGDSATALDVQLTI 537
>pir||B83518 pimeloyl-CoA synthetase PA1017 [imported] - Pseudomonas aeruginosa
(strain PAO1) >gi|9946928|gb|AAG04406.1|AE004534_4
(AE004534) pimeloyl-CoA synthetase [Pseudomonas
aeruginosa]
Length = 715
Score = 157 bits (392), Expect = 1e-37
Identities = 83/217 (38%), Positives = 130/217 (59%)
Query: 22 EYEAKQVLKAYGLPVPEEKLAKTLDEALEYAKEIGYPVVMKLMSPQILHKSDARVVMLNI 81
E EAK++L G+ E + + +EA+ +A+ IGYPVV+KL S I HKS+ V+L +
Sbjct: 494 EAEAKRLLARAGIESAAEAVLGSAEEAVAFAEGIGYPVVLKLASADIQHKSEIGGVLLGV 553
Query: 82 KDEEELKKKWEEIHENAKKYNPNAEILGVLIAPMLKPGREVIIGVTEDPQFGHAIMFGLG 141
D + ++ ++ + A + P A + GVL+A L+ G E +G+ DP FG +FGLG
Sbjct: 554 SDADAVRAGFQLLLRRAAEKAPQARLDGVLVARQLQGGVECFMGIQRDPLFGPVALFGLG 613
Query: 142 GIFVEILKDVTFRLVPITEKDARKMITEIKAYPILAGARGEEPADIDAIVDMLLKVSKLV 201
GIFVE+L+DV FR P +A MI I+ P+L GARG AD+ A+ +L +S+
Sbjct: 614 GIFVEVLQDVVFRRCPFEVDEAEAMIRSIRGAPLLFGARGRPRADVAALARLLSNLSRFA 673
Query: 202 DELRDYIKEMDLNPIFVYNKGEGAVIVDARIILKQRA 238
E + ++ +DLNP+ +G+GA VDA + +++ A
Sbjct: 674 WEAGERLRSVDLNPVIALPEGQGAWAVDAVLEVEEVA 710
>gi|11499106 conserved hypothetical protein [Archaeoglobus fulgidus]
>gi|7483131|pir||F69438 conserved hypothetical protein
AF1511 - Archaeoglobus fulgidus
>gi|2649053|gb|AAB89736.1| (AE000998) conserved
hypothetical protein [Archaeoglobus fulgidus]
Length = 881
Score = 145 bits (362), Expect = 5e-34
Identities = 82/215 (38%), Positives = 135/215 (62%), Gaps = 12/215 (5%)
Query: 24 EAKQVLKAYGLPVPEEKLAKTLDEALEYAKEIGYPVVMKLMSPQILHKSDARVVMLNIKD 83
EA ++L+ +G+ PE + KT +E E AK+ G V +K +P ++HK++ V +N+
Sbjct: 679 EAFELLRCFGISFPEYEYVKTPEEVYEAAKKFGR-VALKAHAPNLIHKTEKGAVKVNLTP 737
Query: 84 EEELKKKWEEIHENAKKYNPNAEILGVLIAPMLKPGREVIIGVTEDPQFGHAIMFGLGGI 143
+E KK+ EE+ + E+ G L+ M + G E+ +GV EDP FG I G GGI
Sbjct: 738 KEA-KKEAEEMLKRI------GEVEGFLVQRMSR-GVEMFVGVAEDPSFGPLITCGAGGI 789
Query: 144 FVEILKDVTFRLVPITEKDARKMITEIKAYPILAGARGEEPADIDAIVDMLLKVSKLVDE 203
VE++KDV+ R+ PIT +DA +M+ E+KAY +L G RG E A+++A ++ +L+++ L++E
Sbjct: 790 LVELMKDVSVRVTPITRQDAVEMVRELKAYRLLEGYRGGEKANVEAFIETILRINYLIEE 849
Query: 204 LRDYIKEMDLNPIFVYNKGEGAVIVDARIILKQRA 238
+ I EMD NP+ V GA +VDA+I +++ +
Sbjct: 850 FPE-IVEMDCNPVMV--SSSGAEVVDAKIRIRRNS 881
>gb|AAK42002.1| Conserved hypothetical protein [Sulfolobus solfataricus]
Length = 660
Score = 142 bits (354), Expect = 4e-33
Identities = 89/237 (37%), Positives = 144/237 (60%), Gaps = 21/237 (8%)
Query: 2 KEEAVKVIEAVLE--QGRTAMVEYEAKQVLKAYGLPVPEEKLAKTLDEALEYAKEIGYPV 59
K V+ IEA LE +G+ + ++EA ++++ YG+ P+ LA +EA A IGYPV
Sbjct: 442 KIRTVQPIEAALELVKGKKTLKDFEALKLMEIYGIRTPKWGLANNENEAQNVADSIGYPV 501
Query: 60 VMKLMSPQILHKSDARVVMLNIKDEEELKKKWEEIHENAKKYNPNAEILGVLIAPMLKPG 119
VMK+ LHK++ + V++N+ ++E++KK + E+ + + VLI L G
Sbjct: 502 VMKISPDTPLHKTELKGVVVNV-EKEDVKKVYSELSKITSR---------VLIQQQLN-G 550
Query: 120 REVIIGVTEDPQFGHAIMFGLGGIFVEILKDVTFRLVPITEKDARKMITEIKAYPIL-AG 178
EV IG +DP FGH I+ G GGI+VE+LK+V + L P+ E +A++++ E K + +L A
Sbjct: 551 LEVFIGGLKDPVFGHVILIGSGGIYVEVLKNVAYALSPVYEDEAQELLVESKIHDMLNAR 610
Query: 179 ARGEEPADIDAIVDMLLKVSKLVDELRDYIKEMDLNPIFVYNKGEGAVIVDARIILK 235
RG D +I+ + +VS+++ +L +KEMD+NP+FV GA VD RI+L+
Sbjct: 611 KRG---YDESSIIRAITRVSRMIVDLN--VKEMDINPLFV--NENGAFAVDVRIVLE 660
>pir||H83024 hypothetical protein PA4978 [imported] - Pseudomonas aeruginosa
(strain PAO1) >gi|9951261|gb|AAG08363.1|AE004910_10
(AE004910) hypothetical protein [Pseudomonas aeruginosa]
Length = 696
Score = 125 bits (310), Expect = 6e-28
Identities = 78/240 (32%), Positives = 135/240 (55%), Gaps = 19/240 (7%)
Query: 11 AVLEQGRTAMV---------------EYEAKQVLKAYGLPVPEEKLAKTLDEALEYAKEI 55
A+LE+G A+V E+++KQ LK +GLP+P+ L+ T +A E A ++
Sbjct: 457 ALLERGEAALVPICPGPLAGDGYLLDEWQSKQALKPFGLPLPQGVLS-TPGQAREAALDL 515
Query: 56 GYPVVMKLMSPQILHKSDARVVMLNIKDEEELKKKWEEIHENAKKYNPNAEILGVLIAPM 115
G+P+V+K +S + HK++A V L +++E L+ ++ E+ ++ P VL+ M
Sbjct: 516 GFPLVLKAVSAALPHKTEAGGVALGLRNEAALEAALFDMRESLARHAPQLVFERVLLERM 575
Query: 116 L-KPGREVIIGVTEDPQFGHAIMFGLGGIFVEILKDVTFRLVPITEKDARKMITEIKAYP 174
P E+I+GV + FG A++ G GGI VE+L+D L+P T+ R + +++ P
Sbjct: 576 AGAPLAELIVGVKREEGFGLALVIGAGGILVELLRDSRSLLLPTTDAAIRDALLSLRSAP 635
Query: 175 ILAGARGEEPADIDAIVDMLLKVSKLVDELRDYIKEMDLNPIFVYNKGEGAVIVDARIIL 234
+L+G RG ++A+V + V++ E + + E+D+NP+ EGA+ VDA I L
Sbjct: 636 LLSGFRGRPAVCMEALVAAIRAVAEFACEHAERLLELDVNPLLA--DAEGALAVDALIRL 693
>pir||T35878 hypothetical protein SC9B10.09 - Streptomyces coelicolor
>gi|2661695|emb|CAA15799.1| (AL009204) hypothetical
protein SC9B10.09 [Streptomyces coelicolor A3(2)]
Length = 1039
Score = 118 bits (294), Expect = 4e-26
Identities = 68/209 (32%), Positives = 114/209 (54%), Gaps = 5/209 (2%)
Query: 24 EAKQVLKAYGLPVPEEKLAKTLDEALEYAKEIGYPVVMKLMSPQILHKSDARVVMLNIKD 83
E +L YG+ V A T D+A A+ IGYPV +K +P + H++D V L++ D
Sbjct: 819 ETCDLLGRYGVHVHRALPAATPDDAAAAARTIGYPVALKATAPHLRHRADLGGVRLDLAD 878
Query: 84 EEELKKKWEEIHENAKKYNPNAEILGVLIAPMLKPGREVIIGVTEDPQFGHAIMFGLGGI 143
EE+L++ + E+ E + AE+ V + M G + ++ DP G + FGL G
Sbjct: 879 EEQLRRAYAELTE---LFGKPAELRPV-VQGMAPRGVDTVVRAVIDPAAGAVLSFGLAGA 934
Query: 144 FVEILKDVTFRLVPITEKDARKMITEIKAYPILAGARGEEPADIDAIVDMLLKVSKLVDE 203
++L D+ RL+P+T++DA +I ++ P+L G RG P D A+ ++LL+VS+LVD+
Sbjct: 935 ATQLLGDMAHRLIPVTDRDATSLIRSVRTAPLLFGWRGSAPVDAAALEELLLRVSRLVDD 994
Query: 204 LRDYIKEMDLNPIFVYNKGEGAVIVDARI 232
+ + + L P+ V G + R+
Sbjct: 995 HPEVV-AVTLEPVVVAPHGLSVLGASVRL 1022
>sp|P76594|YFIQ_ECOLI HYPOTHETICAL 98.0 KD PROTEIN IN UNG-PSSA INTERGENIC REGION
>gi|7466397|pir||G65036 hypothetical protein b2584 -
Escherichia coli (strain K-12)
>gi|1788938|gb|AAC75637.1| (AE000344) orf, hypothetical
protein [Escherichia coli K12]
Length = 886
Score = 101 bits (249), Expect = 8e-21
Identities = 65/216 (30%), Positives = 116/216 (53%), Gaps = 5/216 (2%)
Query: 4 EAVKVIEAVLEQGRTAMVEYEAKQVLKAYGLPVPEEKLAKTLDEALEYAKEIGYPVVMKL 63
EA +++ + +G T++ +E + +L+AYG+ +A EA+ A++IGYPV +KL
Sbjct: 465 EAHLLLQQAIAEGATSLDTHEVQPILQAYGMNTLPTWIASDSTEAVHIAEQIGYPVALKL 524
Query: 64 MSPQILHKSDARVVMLNIKDEEELKKKWEEIHENAKKYNPNAEILGVLIAPMLK--PGRE 121
SP I HKS+ + VML ++ E+++ I + K P A + G+L+ M +E
Sbjct: 525 RSPDIPHKSEVQGVMLYLRTANEVQQAANAIFDRVKMAWPQARVHGLLVQSMANRAGAQE 584
Query: 122 VIIGVTEDPQFGHAIMFGLGGIFVEILKDVTFRLVPITEKDARKMITE-IKAYPILAGAR 180
+ + V DP FG IM G GG+ L P+ AR ++ + IK+ I A +
Sbjct: 585 LRVVVEHDPVFGPLIMLGEGGVEWRPEDQAVVALPPLNMNLARYLVIQGIKSKKIRARS- 643
Query: 181 GEEPADIDAIVDMLLKVSKLVDELRDYIKEMDLNPI 216
P D+ + +L++VS L+ + + I+ +D++P+
Sbjct: 644 ALRPLDVAGLSQLLVQVSNLIVDCPE-IQRLDIHPL 678
>pir||C82443 conserved hypothetical protein VCA0574 [imported] - Vibrio cholerae
(group O1 strain N16961) >gi|9657984|gb|AAF96476.1|
(AE004388) conserved hypothetical protein [Vibrio
cholerae]
Length = 893
Score = 101 bits (248), Expect = 1e-20
Identities = 69/225 (30%), Positives = 114/225 (50%), Gaps = 5/225 (2%)
Query: 14 EQGRTAMVEYEAKQVLKAYGLPVPEEKLAKTLDEALEYAKEIGYPVVMKLMSPQILHKSD 73
E + + ++ +LK + V +A EA+ A+ IGYPV +KL SP I HKSD
Sbjct: 487 EHDQVNLDTHQIGTLLKCFNFNVLPTWIASDSTEAVHIAETIGYPVAVKLRSPDIAHKSD 546
Query: 74 ARVVMLNIKDEEELKKKWEEIHENAKKYNPNAEILGVLIAPMLK--PGREVIIGVTEDPQ 131
+ VMLN+++ E+ + I + + P+A I G+L+ M K G E+ I V D
Sbjct: 547 VQGVMLNLRNRIEVANAAQAILDRTQLSYPSANIHGLLVQGMAKLAGGEELRIKVKTDAT 606
Query: 132 FGHAIMFGLGGIFVEILKDVTFRLVPITEKDARKMITEIKAYPILAGARGEEPADIDAIV 191
FG I+ G GG + D L P+ AR +I + + P DI+ +
Sbjct: 607 FGPVILLGQGGSEWDESLDAAAALPPLNMTLARYLIVRAIRSGKIRLQKLPVPIDIEGLS 666
Query: 192 DMLLKVSKLVDELRDYIKEMDLNPIFVYNKGEGAVIVDARIILKQ 236
+ L+++S++V E + E+D++P+ V G I+DA ++L+Q
Sbjct: 667 EFLVRISQMVVEC-PQVHELDIHPLLV--NGSQFTILDANLVLRQ 708
>dbj|BAA10925.1| (D64044) hypothetycal 67KD protein fragment in UNG 3' region
[Escherichia coli]
Length = 612
Score = 87.8 bits (214), Expect = 1e-16
Identities = 48/142 (33%), Positives = 80/142 (55%), Gaps = 2/142 (1%)
Query: 4 EAVKVIEAVLEQGRTAMVEYEAKQVLKAYGLPVPEEKLAKTLDEALEYAKEIGYPVVMKL 63
EA +++ + +G T++ +E + +L+AYG+ +A EA+ A++IGYPV +KL
Sbjct: 465 EAHLLLQQAIAEGATSLDTHEVQPILQAYGMNTLPTWIASDYAEAVHIAEQIGYPVALKL 524
Query: 64 MSPQILHKSDARVVMLNIKDEEELKKKWEEIHENAKKYNPNAEILGVLIAPMLK--PGRE 121
SP I HKS+ + VML ++ E+++ I + K P A + G+L+ M +E
Sbjct: 525 RSPDIPHKSEVQGVMLYLRTANEVQQAANAIFDRVKMAWPQARVHGLLVQSMANRAGAQE 584
Query: 122 VIIGVTEDPQFGHAIMFGLGGI 143
+ + V DP FG IM G GG+
Sbjct: 585 LRVVVEHDPVFGPLIMLGEGGV 606
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.318 0.138 0.379
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 84076968
Number of Sequences: 2977
Number of extensions: 3511469
Number of successful extensions: 12787
Number of sequences better than 1.0e-10: 24
Number of HSP's better than 0.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 12724
Number of HSP's gapped (non-prelim): 29
length of query: 238
length of database: 189,106,746
effective HSP length: 58
effective length of query: 180
effective length of database: 154,394,500
effective search space: 27791010000
effective search space used: 27791010000
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.6 bits)
S2: 164 (68.3 bits)